Citrus Sinensis ID: 021300

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310----
Protein Sequence
MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWWQHDWGDEGDSRDD
Secondary Structure (PSIPRED)
ccccccccccccEEEEEEEccccccccEEEEccccccccEEEEEEEEEccccHHHHHcccccccccccccccEEEEEEEEEcccccccccccEEEEcEEEccccccHHHccccccccccccEEEccccccccccccccccEEEEcccEEEEccccccccccccccccccccccccccccccccccEEEEEEEccHHHHHHHHHHHcccEEEEEEcccccHHHHHHHccccEEEEcccHHHHHHHHccccEEEEcccccccHHHHHHccccccEEEEEccccccccccccccccccEEEEEEccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEcccEEEEEEEEccccccEEEEEEccccccccEEEEEEEEEEEcccHHEEccccccccccEEccccEEEEEEEEcccccccccccEEEEccEccccccHHHcccccccccccEEEEccccccccccccccccEEEEEcccEEEEccccccHHHHHHHHcHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHccccEEEEcccccHHHHccccccEEEEEcccHHHHHHHHHHHccccEEEEEEcccccccccccEEEEccEEEcccHHccHHcccEccc
Coil and Loop (DISEMBL)
mgqapeqehpknafgwaakdtsgvlspfhfsrratgekdvtfkvthcgichsdlhmiknewgntiypivpghEIVGVVTEVgskvskfkvgdkvgvgcmvgscrscdscaidlenycpKVIMTYANkyhdgtityggysdimvadehfvvripegtpldatapllcagitvysplrfygldkpgmhvgvvGLGGLGHVAVKFAKAMGVKVTVistspskkseAIERLgadsflvsrDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKsqgklvlvgapekplelpafsllmgeeedswwqhdwgdegdsrdd
Flexible Loop (DISEMBL)
mgqapeqehpknafgwaaKDTSGVLSPFHFSrratgekdvTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTvistspskkseaierlgadsflvsRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWWQHDWGDEGDSRDD
Low Complexity Region (SEG)
MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMhvgvvglgglghvavKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWWQHDWGDEGDSRDD
Disordered region (IsUnstruct)
*************FGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIS******************************MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWWQHDW*********
Disordered Region (DISOPRED)
************AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS****AIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWWQHDWG*EG*****
Disordered Region (DISEMBL)
**********KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWWQHDW*********
Disordered Region (DISPRO)
****PEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWWQHDWGDEGD****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWWQHDWGDEGDSRDD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	314	2.2.26 [Sep-21-2011]
Q9ZRF1	359	Probable mannitol dehydro	N/A	no	0.933	0.816	0.802	1e-130
P93257	361	Probable mannitol dehydro	N/A	no	0.939	0.817	0.749	1e-123
Q6V4H0	360	8-hydroxygeraniol dehydro	N/A	no	0.942	0.822	0.770	1e-119
Q2KNL6	360	Geraniol dehydrogenase 1	N/A	no	0.942	0.822	0.706	1e-118
Q38707	365	Mannitol dehydrogenase OS	N/A	no	0.942	0.810	0.682	1e-113
Q02972	359	Cinnamyl alcohol dehydrog	yes	no	0.901	0.788	0.745	1e-110
P42754	337	Mannitol dehydrogenase (F	N/A	no	0.869	0.810	0.739	1e-110
Q02971	357	Cinnamyl alcohol dehydrog	no	no	0.929	0.817	0.712	1e-109
O65621	363	Probable cinnamyl alcohol	no	no	0.926	0.801	0.642	1e-106
P42734	360	Probable cinnamyl alcohol	no	no	0.942	0.822	0.631	1e-106

>sp|Q9ZRF1|MTDH_FRAAN Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1

 Score =  465 bits (1197), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 235/293 (80%), Positives = 261/293 (89%)

Query: 4   APEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN 63
           A EQEH K A GWAA+D+SGVLSPF+F RR TGEKDVTFKV +CGICHSDLHM+KNEWG 
Sbjct: 2   AIEQEHRKKASGWAARDSSGVLSPFNFYRRETGEKDVTFKVLYCGICHSDLHMVKNEWGF 61

Query: 64  TIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT 123
           + YP+VPGHEIVG VTEVGSKV KFKVGD+VGVGC+VGSCRSC++C   LENYCPK I+T
Sbjct: 62  STYPLVPGHEIVGEVTEVGSKVQKFKVGDRVGVGCIVGSCRSCENCTDHLENYCPKQILT 121

Query: 124 YANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKP 183
           Y  KY+DG+ TYGGYSDIMVADEHF+VRIP+  PLD  APLLCAGIT YSPLR++GLDKP
Sbjct: 122 YGAKYYDGSTTYGGYSDIMVADEHFIVRIPDNLPLDGAAPLLCAGITTYSPLRYFGLDKP 181

Query: 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA 243
           GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP K+ EA++ LGADSFLVSRDQD+MQA
Sbjct: 182 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPKKEEEALKHLGADSFLVSRDQDQMQA 241

Query: 244 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           A+GTMDGIIDTVSA HPL+PLIGLL S GKLV+VGAPEKPLELP F LLMG +
Sbjct: 242 AIGTMDGIIDTVSAQHPLLPLIGLLNSHGKLVMVGAPEKPLELPVFPLLMGRK 294

Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level.
Fragaria ananassa (taxid: 3747)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 5EC: 5

>sp|P93257|MTDH_MESCR Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1

 Score =  442 bits (1136), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 221/295 (74%), Positives = 257/295 (87%)

Query: 2   GQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW 61
             APE  HP+ AFGWAA+DTSG LSP  FSRRATGE+DVTFKV +CGICHSDLH IKNEW
Sbjct: 3   NSAPENVHPQKAFGWAARDTSGTLSPLKFSRRATGEQDVTFKVLYCGICHSDLHYIKNEW 62

Query: 62  GNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVI 121
           GN +YP +PGHEIVGVVTEVG+KV  FKVGDKVGVGCMVGSCRSC+SC   LENYCPK+I
Sbjct: 63  GNAVYPAIPGHEIVGVVTEVGNKVQNFKVGDKVGVGCMVGSCRSCESCENHLENYCPKMI 122

Query: 122 MTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD 181
           +TY + Y+DGT+TYGGYSDIMV +EHF VRIP+   LDATAPLLCAG+TVYSPL+ + LD
Sbjct: 123 LTYGSTYYDGTLTYGGYSDIMVVEEHFAVRIPDNMALDATAPLLCAGVTVYSPLKHFELD 182

Query: 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241
           KPG+H+GVVGLGGLGH+AVKF KA G KVTVISTSP+KK EA+ RLGADSF+VSR+ ++M
Sbjct: 183 KPGLHIGVVGLGGLGHMAVKFGKAFGAKVTVISTSPNKKDEAVNRLGADSFVVSREPEQM 242

Query: 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           Q+AMGT+DGIIDTVSA HPL+PL+GLLKSQGK+++VG P+KPLELP F LL G +
Sbjct: 243 QSAMGTLDGIIDTVSAAHPLLPLLGLLKSQGKMIMVGVPDKPLELPVFPLLQGRK 297

Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level.

Mesembryanthemum crystallinum (taxid: 3544)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 5

>sp|Q6V4H0|10HGO_CATRO 8-hydroxygeraniol dehydrogenase OS=Catharanthus roseus GN=10HGO PE=1 SV=1

 Score =  429 bits (1103), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/296 (77%), Positives = 256/296 (86%)

Query: 1   MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
           M ++PE EHP  AFGWAA+DTSG LSPFHFSRRATGE DV FKV +CGICHSDLHMIKNE
Sbjct: 1   MAKSPEVEHPVKAFGWAARDTSGHLSPFHFSRRATGEHDVQFKVLYCGICHSDLHMIKNE 60

Query: 61  WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
           WG T YPIVPGHEIVG+VTEVGSKV KFKVGDKVGVGC+VGSCR CD C  DLENYCP  
Sbjct: 61  WGFTKYPIVPGHEIVGIVTEVGSKVEKFKVGDKVGVGCLVGSCRKCDMCTKDLENYCPGQ 120

Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
           I+TY+  Y DGT TYGGYSD+MVADEHFV+R PE  P+D  APLLCAGIT YSPLR++GL
Sbjct: 121 ILTYSATYTDGTTTYGGYSDLMVADEHFVIRWPENLPMDIGAPLLCAGITTYSPLRYFGL 180

Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
           DKPG HVGVVGLGGLGHVAVKFAKA G KVTVISTS SKK EA+E+LGADSFLVSRD ++
Sbjct: 181 DKPGTHVGVVGLGGLGHVAVKFAKAFGAKVTVISTSESKKQEALEKLGADSFLVSRDPEQ 240

Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           M+AA  ++DGIIDTVSA+HP+MPL+ +LKS GKL+LVGAPEKPLELP+F L+ G +
Sbjct: 241 MKAAAASLDGIIDTVSAIHPIMPLLSILKSHGKLILVGAPEKPLELPSFPLIAGRK 296

Dehydrogenase involved in the biosynthesis of oxogeranial from hydroxygeraniol, a precursor of the terpenoid indole alkaloids such as vinblastine and vincristine.

Catharanthus roseus (taxid: 4058)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 2

EC: 4

>sp|Q2KNL6|GEDH1_OCIBA Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1

 Score =  425 bits (1092), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 209/296 (70%), Positives = 242/296 (81%)

Query: 1   MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
           M ++PE EHP  A GWAA D SG  SPF+FSRRATGE+DV F+V +CG+CHSDLHM+KNE
Sbjct: 1   MAKSPETEHPVKALGWAATDNSGTFSPFNFSRRATGERDVQFRVLYCGVCHSDLHMVKNE 60

Query: 61  WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
           WG T YPIVPGHEIVG+VTEVGSKV K K+GDKVGVG +VGSCR CD C+ DLENYC K 
Sbjct: 61  WGVTHYPIVPGHEIVGIVTEVGSKVEKVKIGDKVGVGVLVGSCRQCDQCSNDLENYCYKQ 120

Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
           I+TY   Y DGTI  GGYSDIMVADEHF++R PE  PLDA APLLCAGIT YSPL+++GL
Sbjct: 121 ILTYGAPYLDGTIARGGYSDIMVADEHFIIRWPENFPLDAGAPLLCAGITTYSPLKYFGL 180

Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
           DKPG+ VGV GLGGLGHVAVKFAKA G KVTVISTS SKK EA++ LG D F+VS D  +
Sbjct: 181 DKPGLRVGVNGLGGLGHVAVKFAKAFGTKVTVISTSLSKKEEAMQHLGVDEFVVSTDPQQ 240

Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           MQAA+GT+DGIIDTVSA HP++PL+ LLK  GKL++VG P+KPL+LP F L+ G  
Sbjct: 241 MQAAVGTLDGIIDTVSAPHPIVPLLSLLKPHGKLIVVGLPDKPLQLPVFPLIQGRR 296

Involved in the production of citral, a mixture of geranial and neral with a strong lemony scent. Reversibly oxidizes geraniol and nerol in equal efficiency. Also active, although at a lower efficiency, with cinnamyl alcohol.

Ocimum basilicum (taxid: 39350)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 3

>sp|Q38707|MTDH_APIGR Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1

 Score =  407 bits (1045), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 202/296 (68%), Positives = 237/296 (80%)

Query: 1   MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
           M ++ E EHP  AFGWAA+DT+G+LSPF FSRRATGEKDV  KV  CG+CHSD HMI N 
Sbjct: 1   MAKSSEIEHPVKAFGWAARDTTGLLSPFKFSRRATGEKDVRLKVLFCGVCHSDHHMIHNN 60

Query: 61  WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
           WG T YPIVPGHEIVGVVTEVGSKV K KVGD VG+GC+VGSCRSC+SC  + E++C   
Sbjct: 61  WGFTTYPIVPGHEIVGVVTEVGSKVEKVKVGDNVGIGCLVGSCRSCESCCDNRESHCENT 120

Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
           I TY + Y DGT+T+GGYSD MVADEHF++R P+  PLD+ APLLCAGIT YSPL++YGL
Sbjct: 121 IDTYGSIYFDGTMTHGGYSDTMVADEHFILRWPKNLPLDSGAPLLCAGITTYSPLKYYGL 180

Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
           DKPG  +GVVGLGGLGHVAVK AKA G +VTVI  S SK+ EA+E+LGADSFL++ DQ++
Sbjct: 181 DKPGTKIGVVGLGGLGHVAVKMAKAFGAQVTVIDISESKRKEALEKLGADSFLLNSDQEQ 240

Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           M+ A  ++DGIIDTV   HPL PL  LLK  GKLV+VGAPEKP ELP FSLL G +
Sbjct: 241 MKGARSSLDGIIDTVPVNHPLAPLFDLLKPNGKLVMVGAPEKPFELPVFSLLKGRK 296

Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level.

Apium graveolens (taxid: 4045)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 5

>sp|Q02972|CADH8_ARATH Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1

 Score =  399 bits (1025), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 211/283 (74%), Positives = 239/283 (84%)

Query: 11  KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVP 70
           K AFG AAKD SGVLSPF F+RR TGEKDV FKV  CGICHSDLHM+KNEWG + YP+VP
Sbjct: 7   KEAFGLAAKDNSGVLSPFSFTRRETGEKDVRFKVLFCGICHSDLHMVKNEWGMSTYPLVP 66

Query: 71  GHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD 130
           GHEIVGVVTEVG+KV+KFK G+KVGVGC+V SC SCDSC   +ENYCPK I TY   Y+D
Sbjct: 67  GHEIVGVVTEVGAKVTKFKTGEKVGVGCLVSSCGSCDSCTEGMENYCPKSIQTYGFPYYD 126

Query: 131 GTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 190
            TITYGGYSD MV +E FV+RIP+  PLDA APLLCAGITVYSP++++GLDKPGMH+GVV
Sbjct: 127 NTITYGGYSDHMVCEEGFVIRIPDNLPLDAAAPLLCAGITVYSPMKYHGLDKPGMHIGVV 186

Query: 191 GLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
           GLGGLGHV VKFAKAMG KVTVISTS  K+ EAI RLGAD+FLVSRD  +++ AMGTMDG
Sbjct: 187 GLGGLGHVGVKFAKAMGTKVTVISTSEKKRDEAINRLGADAFLVSRDPKQIKDAMGTMDG 246

Query: 251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLM 293
           IIDTVSA H L+PL+GLLK +GKLV+VGAPEKPLELP   L+ 
Sbjct: 247 IIDTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIF 289

Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

>sp|P42754|MTDH_PETCR Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1

 Score =  397 bits (1019), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 202/273 (73%), Positives = 228/273 (83%)

Query: 24  VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGS 83
           +LSPF FSRRATG+ DV FKV +CG+CHSDLHM+KNEWG T YPIVPGHEIVG VTEVGS
Sbjct: 1   ILSPFKFSRRATGDNDVRFKVLYCGVCHSDLHMVKNEWGMTTYPIVPGHEIVGRVTEVGS 60

Query: 84  KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMV 143
           KV KFKVGD VGVGC+VGSC SC++C  D EN C K + TYA    DG+ITYGGY+D MV
Sbjct: 61  KVEKFKVGDAVGVGCLVGSCLSCENCDDDSENNCAKQVQTYAFTNVDGSITYGGYADSMV 120

Query: 144 ADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFA 203
           AD+HFV+R PE  PLD+ APLLCAGIT YSPLR++GLDKPG  VGVVGLGGLGHVAVK A
Sbjct: 121 ADQHFVLRWPENLPLDSGAPLLCAGITTYSPLRYHGLDKPGTKVGVVGLGGLGHVAVKMA 180

Query: 204 KAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 263
           KA G  VTVISTS SKK EA+E+LGAD FLVS D D+MQAA GT+ GIIDTVSA+HP++P
Sbjct: 181 KAFGAHVTVISTSESKKQEALEKLGADEFLVSSDSDQMQAATGTLHGIIDTVSALHPVVP 240

Query: 264 LIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           L+GLLK  GKLV+VGAPEKPLELP F LLMG +
Sbjct: 241 LLGLLKVNGKLVMVGAPEKPLELPVFPLLMGRK 273

Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level.

Petroselinum crispum (taxid: 4043)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 5

>sp|Q02971|CADH7_ARATH Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2

 Score =  395 bits (1015), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 211/296 (71%), Positives = 243/296 (82%), Gaps = 4/296 (1%)

Query: 1   MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
           MG+  E+E    AFG AAKD SG+LSPF FSRRATGEKDV FKV  CGICH+DL M KNE
Sbjct: 1   MGKVLEKE----AFGLAAKDESGILSPFSFSRRATGEKDVRFKVLFCGICHTDLSMAKNE 56

Query: 61  WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
           WG T YP+VPGHEIVGVVTEVG+KV KF  GDKVGVG M GSCRSCDSC    ENYCPK+
Sbjct: 57  WGLTTYPLVPGHEIVGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKM 116

Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
           I+T   K  D T+T+GGYSD MV  E F++RIP+  PLD  APLLCAG+TVYSP++++GL
Sbjct: 117 ILTSGAKNFDDTMTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGL 176

Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
           DKPGMH+GVVGLGGLGHVAVKFAKAMG KVTVISTS  K+ EA+ RLGAD+FLVSRD  +
Sbjct: 177 DKPGMHIGVVGLGGLGHVAVKFAKAMGTKVTVISTSERKRDEAVTRLGADAFLVSRDPKQ 236

Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           M+ AMGTMDGIIDTVSA HPL+PL+GLLK++GKLV+VGAP +PLELP F L+ G +
Sbjct: 237 MKDAMGTMDGIIDTVSATHPLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRK 292

Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

>sp|O65621|CADH6_ARATH Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1

 Score =  384 bits (985), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 187/291 (64%), Positives = 235/291 (80%)

Query: 6   EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTI 65
           E+E    AFGWAA+D+SG LSPF FSRR TGE++V  KV +CGICHSDLH +KNEW ++I
Sbjct: 7   EKEQSVEAFGWAARDSSGHLSPFVFSRRKTGEEEVRVKVLYCGICHSDLHCLKNEWHSSI 66

Query: 66  YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
           YP+VPGHEI+G V+E+G+KVSKF +GDKVGVGC+V SCR+C+SC  D ENYC K I TY 
Sbjct: 67  YPLVPGHEIIGEVSEIGNKVSKFNLGDKVGVGCIVDSCRTCESCREDQENYCTKAIATYN 126

Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGM 185
             +HDGTI YGGYSD +V DE + V+IP   PL + APLLCAGI++YSP++++GL  P  
Sbjct: 127 GVHHDGTINYGGYSDHIVVDERYAVKIPHTLPLVSAAPLLCAGISMYSPMKYFGLTGPDK 186

Query: 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
           HVG+VGLGGLGH+ V+FAKA G KVTV+S++  K  +A++ LGAD FLVS D+D+M+AAM
Sbjct: 187 HVGIVGLGGLGHIGVRFAKAFGTKVTVVSSTTGKSKDALDTLGADGFLVSTDEDQMKAAM 246

Query: 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           GTMDGIIDTVSA H + PLIGLLKS GKLVL+GA EKP ++ AFSL++G +
Sbjct: 247 GTMDGIIDTVSASHSISPLIGLLKSNGKLVLLGATEKPFDISAFSLILGRK 297

Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

>sp|P42734|CADH9_ARATH Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=2 SV=2

 Score =  384 bits (985), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 187/296 (63%), Positives = 230/296 (77%)

Query: 1   MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
           M ++PE EHP   FGW A+D SGVLSPFHFSRR  GE DVT K+  CG+CH+DLH IKN+
Sbjct: 1   MAKSPETEHPNKVFGWGARDKSGVLSPFHFSRRDNGENDVTVKILFCGVCHTDLHTIKND 60

Query: 61  WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
           WG + YP+VPGHEIVG+ T+VG  V+KFK GD+VGVG + GSC+SC+SC  DLENYCP++
Sbjct: 61  WGYSYYPVVPGHEIVGIATKVGKNVTKFKEGDRVGVGVISGSCQSCESCDQDLENYCPQM 120

Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
             TY     DGT  YGGYS+ +V D+ FV+R PE  P D+ APLLCAGITVYSP+++YG+
Sbjct: 121 SFTYNAIGSDGTKNYGGYSENIVVDQRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGM 180

Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
            + G H+GV GLGGLGHVAVK  KA G+KVTVIS+S +K  EAI  LGADSFLV+ D  +
Sbjct: 181 TEAGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSTKAEEAINHLGADSFLVTTDPQK 240

Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           M+AA+GTMD IIDT+SAVH L PL+GLLK  GKL+ +G PEKPLELP F L++G +
Sbjct: 241 MKAAIGTMDYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRK 296

Involved in lignin biosynthesis. May catalyze the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	314
224138226	362	cinnamyl alcohol dehydrogenase-like prot	0.936	0.812	0.823	1e-136
118489566	362	unknown [Populus trichocarpa x Populus d	0.936	0.812	0.819	1e-135
449451377	361	PREDICTED: probable mannitol dehydrogena	0.942	0.819	0.793	1e-135
255587478	359	alcohol dehydrogenase, putative [Ricinus	0.929	0.813	0.808	1e-135
255587709	362	alcohol dehydrogenase, putative [Ricinus	0.929	0.806	0.818	1e-135
358248942	362	uncharacterized protein LOC100809071 [Gl	0.929	0.806	0.804	1e-133
224104043	360	cinnamyl alcohol dehydrogenase-like prot	0.926	0.808	0.821	1e-133
224144875	360	cinnamyl alcohol dehydrogenase-like prot	0.926	0.808	0.821	1e-133
224104051	360	cinnamyl alcohol dehydrogenase-like prot	0.926	0.808	0.828	1e-132
327202268	361	cinnamyl alcohol dehydrogenase [Sinopodo	0.942	0.819	0.817	1e-132

>gi|224138226|ref|XP_002322761.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] gi|222867391|gb|EEF04522.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa]

 Score =  490 bits (1261), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 242/294 (82%), Positives = 266/294 (90%)

Query: 3   QAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG 62
           + PE+EHPK AFGWAA+D SGVLSPF FSRRATGEKDV FKV +CGICHSDLHM+KNEWG
Sbjct: 4   KLPEEEHPKPAFGWAARDQSGVLSPFKFSRRATGEKDVAFKVLYCGICHSDLHMVKNEWG 63

Query: 63  NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIM 122
            T YP++PGHEIVGVVTEVGSKV KFKVGDKVGVGCMVGSCRSCDSC  +LENYC K I+
Sbjct: 64  VTQYPLIPGHEIVGVVTEVGSKVEKFKVGDKVGVGCMVGSCRSCDSCDNNLENYCSKKIL 123

Query: 123 TYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDK 182
           TY  KY+DGT+TYGGYSD MVADEHF+VRIP   PLDA APLLCAGITVYSPLR++GLDK
Sbjct: 124 TYGAKYYDGTVTYGGYSDNMVADEHFIVRIPNNLPLDAGAPLLCAGITVYSPLRYFGLDK 183

Query: 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ 242
           PGMHVG+VGLGGLGHVAVKFA+AMGVKVTVISTSP+KK EA+E LGADSFLVSRDQD+MQ
Sbjct: 184 PGMHVGIVGLGGLGHVAVKFARAMGVKVTVISTSPNKKQEALENLGADSFLVSRDQDQMQ 243

Query: 243 AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           AAMGT+DGIIDTVSAVHPL+PL+ LLKS GKLVLVGAPEKPLELP F L+ G +
Sbjct: 244 AAMGTLDGIIDTVSAVHPLLPLVALLKSHGKLVLVGAPEKPLELPVFPLITGRK 297

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489566|gb|ABK96585.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 241/294 (81%), Positives = 265/294 (90%)

Query: 3   QAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG 62
           + PE+EHPK AFGWAA+D SGVLSPF FSRRATGEKDV F V +CGICHSDLHM+KNEWG
Sbjct: 4   KLPEEEHPKPAFGWAARDQSGVLSPFKFSRRATGEKDVAFTVLYCGICHSDLHMVKNEWG 63

Query: 63  NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIM 122
            T YP++PGHEIVGVVTEVGSKV KFKVGDKVGVGCMVGSCRSCDSC  +LENYC K I+
Sbjct: 64  VTQYPLIPGHEIVGVVTEVGSKVEKFKVGDKVGVGCMVGSCRSCDSCDNNLENYCSKKIL 123

Query: 123 TYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDK 182
           TY  KY+DGT+TYGGYSD MVADEHF+VRIP   PLDA APLLCAGITVYSPLR++GLDK
Sbjct: 124 TYGAKYYDGTVTYGGYSDNMVADEHFIVRIPNNLPLDAGAPLLCAGITVYSPLRYFGLDK 183

Query: 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ 242
           PGMHVG+VGLGGLGHVAVKFA+AMGVKVTVISTSP+KK EA+E LGADSFLVSRDQD+MQ
Sbjct: 184 PGMHVGIVGLGGLGHVAVKFARAMGVKVTVISTSPNKKQEALENLGADSFLVSRDQDQMQ 243

Query: 243 AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           AAMGT+DGIIDTVSAVHPL+PL+ LLKS GKLVLVGAPEKPLELP F L+ G +
Sbjct: 244 AAMGTLDGIIDTVSAVHPLLPLVALLKSHGKLVLVGAPEKPLELPVFPLITGRK 297

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451377|ref|XP_004143438.1| PREDICTED: probable mannitol dehydrogenase-like [Cucumis sativus] gi|449496398|ref|XP_004160124.1| PREDICTED: probable mannitol dehydrogenase-like [Cucumis sativus] gi|227330353|emb|CAY19192.1| somatic embryogenesis cinnamyl alcohol dehydrogenase 1 [Cucumis sativus]

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 235/296 (79%), Positives = 268/296 (90%)

Query: 1   MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
           MG++P ++HPK AFGWAA DTSG+LSPFHFSRR TGE DV FKV +CGICHSDLHM+KNE
Sbjct: 1   MGKSPAEQHPKKAFGWAASDTSGILSPFHFSRRETGENDVAFKVLYCGICHSDLHMLKNE 60

Query: 61  WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
           WGNTIYPIVPGHEIVG VTEVGSKV  FKVGDKVGVGCMVGSCRSCD+C+ +LENYCPK+
Sbjct: 61  WGNTIYPIVPGHEIVGEVTEVGSKVKNFKVGDKVGVGCMVGSCRSCDNCSNNLENYCPKM 120

Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
           I+TY++K  DG+ITYGGYS+ MVADEHF+VRIP+  PL A APLLCAGITVYSPLR+YGL
Sbjct: 121 ILTYSSKESDGSITYGGYSNCMVADEHFIVRIPDSIPLHAGAPLLCAGITVYSPLRYYGL 180

Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
           DKPGM +GVVGLGGLGHVAVKFAKA G KVTVISTSP+KK EAIERLGADSFLVSRDQ++
Sbjct: 181 DKPGMQIGVVGLGGLGHVAVKFAKAFGAKVTVISTSPNKKQEAIERLGADSFLVSRDQEQ 240

Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           MQAA GT+DGIIDTVSA HPL+PL+ L+K+ GKLV+VGAPEKPLE+PAF+L+ G +
Sbjct: 241 MQAARGTLDGIIDTVSAAHPLLPLLSLIKTHGKLVMVGAPEKPLEIPAFALIGGRK 296

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255587478|ref|XP_002534286.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223525574|gb|EEF28097.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  486 bits (1252), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 236/292 (80%), Positives = 265/292 (90%)

Query: 5   PEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNT 64
           PE+EHP+ AFGWAA+D SGVLSP  FSRR TGEKDV+F+V +CG+CHSDLHM+KNEWG +
Sbjct: 3   PEEEHPRQAFGWAARDQSGVLSPLKFSRRETGEKDVSFRVMYCGMCHSDLHMVKNEWGIS 62

Query: 65  IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY 124
            YP+VPGHEIVGVVTEVGSKV KFKVG+KVGVGCMVGSCRSCD+C  DLENYCP++I+TY
Sbjct: 63  AYPLVPGHEIVGVVTEVGSKVEKFKVGEKVGVGCMVGSCRSCDNCTNDLENYCPEIILTY 122

Query: 125 ANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG 184
             KY+DGT TYGGYSDIMVA+EHFVVRIP+  PLDATAPLLCAGITVYSPL++YGLDKPG
Sbjct: 123 GAKYYDGTTTYGGYSDIMVANEHFVVRIPDNLPLDATAPLLCAGITVYSPLKYYGLDKPG 182

Query: 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA 244
             + VVGLGGLGH+AVKFAKAMG KVTVISTSP+KK EAIERLGADSFLV+RDQD+M+ A
Sbjct: 183 TQLAVVGLGGLGHMAVKFAKAMGAKVTVISTSPNKKQEAIERLGADSFLVTRDQDQMKGA 242

Query: 245 MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           MGTMDGIIDTVSA+H L+PLIGLLKS GKLVLVGAPEKPLELPAF LL G +
Sbjct: 243 MGTMDGIIDTVSAMHLLLPLIGLLKSHGKLVLVGAPEKPLELPAFPLLAGRK 294

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255587709|ref|XP_002534367.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223525426|gb|EEF28018.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  486 bits (1251), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 239/292 (81%), Positives = 267/292 (91%)

Query: 5   PEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNT 64
           PE++HP+ AFGWAA+D SGVLSPF FSRR TGEKDV+FKV +CG+CHSDLHM+KNEWG +
Sbjct: 6   PEKDHPRKAFGWAARDQSGVLSPFTFSRRETGEKDVSFKVLYCGMCHSDLHMVKNEWGTS 65

Query: 65  IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY 124
            YP+VPGHEIVGVVTEVGSKV K KVGDKVGVGCMVGSCRSC++C  DLENYCPK+I+TY
Sbjct: 66  TYPLVPGHEIVGVVTEVGSKVEKIKVGDKVGVGCMVGSCRSCNNCNKDLENYCPKMILTY 125

Query: 125 ANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG 184
             KY+DGT TYGGYSDIMV+DEHFVVRIP+  PLDATAPLLCAGITVYSPL++YGLDKPG
Sbjct: 126 GAKYYDGTTTYGGYSDIMVSDEHFVVRIPDNLPLDATAPLLCAGITVYSPLKYYGLDKPG 185

Query: 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA 244
           M +GVVGLGGLGH+AVKFAKAMG KVTVISTSP+KK EAIERLGADSFLVSRDQD+M+ A
Sbjct: 186 MQLGVVGLGGLGHMAVKFAKAMGAKVTVISTSPNKKQEAIERLGADSFLVSRDQDQMKGA 245

Query: 245 MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           +GTMDGIIDTVSA+HPL PLIGLLKS GKLVLVGAPEKPLELPAF L+ G +
Sbjct: 246 IGTMDGIIDTVSAMHPLSPLIGLLKSDGKLVLVGAPEKPLELPAFPLIGGRK 297

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248942|ref|NP_001240222.1| uncharacterized protein LOC100809071 [Glycine max] gi|255642037|gb|ACU21285.1| unknown [Glycine max]

 Score =  480 bits (1235), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 235/292 (80%), Positives = 266/292 (91%)

Query: 5   PEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNT 64
           PE EHPK  FGWAA+D+SG+LSPF+FSRR TGEKD+ FKV +CGICHSDLHM+KNEWGNT
Sbjct: 6   PEMEHPKKVFGWAARDSSGLLSPFNFSRRETGEKDLVFKVQYCGICHSDLHMLKNEWGNT 65

Query: 65  IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY 124
            YP+VPGHEI GVVTEVGSKV KFKVGD+VGVGCM+GSCRSC+SC  +LENYCPK+I+TY
Sbjct: 66  TYPLVPGHEIAGVVTEVGSKVQKFKVGDRVGVGCMIGSCRSCESCDENLENYCPKMILTY 125

Query: 125 ANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG 184
             KY DGTIT+GGYSD+MVADEHFVVRIP+  PLDA APLLCAGITVYSPLR+YGLDKPG
Sbjct: 126 GVKYFDGTITHGGYSDLMVADEHFVVRIPDNLPLDAAAPLLCAGITVYSPLRYYGLDKPG 185

Query: 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA 244
           +++GVVGLGGLGH+AVKFAKA+G  VTVISTSP+KK EAIE +GADSF+VSR+QD+MQA 
Sbjct: 186 LNLGVVGLGGLGHMAVKFAKALGANVTVISTSPNKKKEAIENIGADSFVVSREQDQMQAV 245

Query: 245 MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           MGTMDGIIDTVSAVHPL+PLIGLLK  GKLV+VGAPEKPLELP FSLLMG +
Sbjct: 246 MGTMDGIIDTVSAVHPLVPLIGLLKPHGKLVMVGAPEKPLELPVFSLLMGRK 297

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104043|ref|XP_002313294.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] gi|222849702|gb|EEE87249.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa]

 Score =  479 bits (1233), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 239/291 (82%), Positives = 260/291 (89%)

Query: 6   EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTI 65
           E+EHP  AFGWAA+D SGVLSPF FSRR+TGEKDV FKV  CGICHSDLHM KNEWG   
Sbjct: 7   EEEHPNKAFGWAARDQSGVLSPFKFSRRSTGEKDVRFKVLFCGICHSDLHMAKNEWGTAT 66

Query: 66  YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
           YP+VPGHEIVG VTEVGSKV KFKVGDKVGVGC+VGSC SCDSC  +LENYCPK+I+TY+
Sbjct: 67  YPLVPGHEIVGEVTEVGSKVEKFKVGDKVGVGCLVGSCHSCDSCNNNLENYCPKMILTYS 126

Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGM 185
            KYHDGT TYGGYSD MV DEHFV+RIP+  PLDA APLLCAGITVYSPLRF+ LDKPGM
Sbjct: 127 TKYHDGTTTYGGYSDSMVTDEHFVIRIPDNLPLDAAAPLLCAGITVYSPLRFFNLDKPGM 186

Query: 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
           HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP KK EA+E LGADSFLVSRDQDEMQAA+
Sbjct: 187 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPKKKQEALEHLGADSFLVSRDQDEMQAAV 246

Query: 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           GTMDG+IDTVSA+HP++PLI LLK+QGKLVLVGAPEKPLELP F L+MG +
Sbjct: 247 GTMDGVIDTVSAIHPILPLISLLKTQGKLVLVGAPEKPLELPVFPLIMGRK 297

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224144875|ref|XP_002336182.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] gi|222831876|gb|EEE70353.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa]

 Score =  479 bits (1232), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 239/291 (82%), Positives = 260/291 (89%)

Query: 6   EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTI 65
           E+EHP  AFGWAA+D SGVLSPF FSRR+TGEKDV FKV  CGICHSDLHM KNEWG   
Sbjct: 7   EEEHPTKAFGWAARDQSGVLSPFKFSRRSTGEKDVRFKVLFCGICHSDLHMAKNEWGTAT 66

Query: 66  YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
           YP+VPGHEIVG VTEVGSKV KFKVGDKVGVGC+VGSC SCDSC  +LENYCPK+I+TY+
Sbjct: 67  YPLVPGHEIVGEVTEVGSKVEKFKVGDKVGVGCLVGSCHSCDSCNNNLENYCPKMILTYS 126

Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGM 185
            KYHDGT TYGGYSD MV DEHFV+RIP+  PLDA APLLCAGITVYSPLRF+ LDKPGM
Sbjct: 127 TKYHDGTTTYGGYSDSMVTDEHFVIRIPDNLPLDAAAPLLCAGITVYSPLRFFNLDKPGM 186

Query: 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
           HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP KK EA+E LGADSFLVSRDQDEMQAA+
Sbjct: 187 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPKKKQEALEHLGADSFLVSRDQDEMQAAV 246

Query: 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           GTMDG+IDTVSA+HP++PLI LLK+QGKLVLVGAPEKPLELP F L+MG +
Sbjct: 247 GTMDGVIDTVSAIHPILPLISLLKTQGKLVLVGAPEKPLELPVFPLIMGRK 297

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104051|ref|XP_002313297.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] gi|222849705|gb|EEE87252.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa]

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 241/291 (82%), Positives = 259/291 (89%)

Query: 6   EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTI 65
           E+EHP  AFGWAA+D SGVLSPF FSRR+TGE DV FKV  CGICHSDLHM KNEWG + 
Sbjct: 7   EEEHPTKAFGWAARDQSGVLSPFKFSRRSTGENDVRFKVLFCGICHSDLHMAKNEWGTST 66

Query: 66  YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
           YP+VPGHEIVG VTEVGSKV KFKVGDKVGVGCMVGSC SC SC  DLENYCPK+I+TY+
Sbjct: 67  YPLVPGHEIVGEVTEVGSKVEKFKVGDKVGVGCMVGSCHSCGSCNNDLENYCPKMILTYS 126

Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGM 185
            KYHDGT TYGGYSD MV DEHFVVRIP+  PLDA APLLCAGITVYSPLRF+ LDKPGM
Sbjct: 127 TKYHDGTTTYGGYSDSMVTDEHFVVRIPDNLPLDAAAPLLCAGITVYSPLRFFNLDKPGM 186

Query: 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
           HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP KK EA+E LGADSFLVSRDQDEMQAAM
Sbjct: 187 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPKKKQEALEHLGADSFLVSRDQDEMQAAM 246

Query: 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           GTMDG+IDTVSA+HP++PLI LLK+QGKLVLVGAPEKPLELP F L+MG +
Sbjct: 247 GTMDGVIDTVSAIHPILPLISLLKTQGKLVLVGAPEKPLELPVFPLIMGRK 297

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|327202268|gb|AEA36767.1| cinnamyl alcohol dehydrogenase [Sinopodophyllum hexandrum]

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 242/296 (81%), Positives = 267/296 (90%)

Query: 1   MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
           M  +PEQEHPK A GWAA+DTSGVLSPF+FSRR TGEKDV FKV +CGICHSDLHM+KNE
Sbjct: 1   MVASPEQEHPKKAIGWAARDTSGVLSPFNFSRRETGEKDVAFKVLYCGICHSDLHMVKNE 60

Query: 61  WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
           WG++ YP+VPGHEIVGVVTEVGSKV   KVGDKVGVGCMVGSCRSCDSCA  LENYCPK+
Sbjct: 61  WGSSTYPLVPGHEIVGVVTEVGSKVQNIKVGDKVGVGCMVGSCRSCDSCADHLENYCPKM 120

Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
           I+T++ K +DGTITYGGYSDIMVADEHF+VRIPE  PLD  APLLCA IT YSPLR +GL
Sbjct: 121 ILTHSAKNYDGTITYGGYSDIMVADEHFIVRIPENLPLDGAAPLLCARITTYSPLRHFGL 180

Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
           DKPGMHVGVVGLGGLGHVAVKFAKA+GVKVTVISTSP KK+EA+E L ADSFLVS DQ+E
Sbjct: 181 DKPGMHVGVVGLGGLGHVAVKFAKALGVKVTVISTSPKKKTEAVEHLHADSFLVSTDQNE 240

Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           MQAAMGTMDGIIDTVSAVHPL+PLIGLLK+QGK+V+VGAPEKPLELP F L+MG +
Sbjct: 241 MQAAMGTMDGIIDTVSAVHPLVPLIGLLKTQGKIVMVGAPEKPLELPVFPLIMGRK 296

Source: Sinopodophyllum hexandrum

Species: Sinopodophyllum hexandrum

Genus: Sinopodophyllum

Family: Berberidaceae

Order: Ranunculales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	314
TAIR|locus:2005528	359	ELI3-2 "elicitor-activated gen	0.898	0.785	0.702	3.1e-106
TAIR|locus:2005527	357	ELI3-1 "elicitor-activated gen	0.910	0.801	0.678	2.9e-103
TAIR|locus:2120968	363	CAD6 "cinnamyl alcohol dehydro	0.926	0.801	0.601	7.6e-96
TAIR|locus:2136278	360	CAD9 "cinnamyl alcohol dehydro	0.942	0.822	0.587	2e-95
TAIR|locus:2052516	376	CAD2 "cinnamyl alcohol dehydro	0.904	0.755	0.604	2.4e-92
TAIR|locus:2052494	375	CAD3 "cinnamyl alcohol dehydro	0.904	0.757	0.6	1.3e-91
UNIPROTKB|Q0JA75	379	CAD7 "Cinnamyl alcohol dehydro	0.929	0.770	0.544	1.2e-83
TAIR|locus:2090704	365	ATCAD4 [Arabidopsis thaliana (	0.936	0.805	0.510	1.9e-74
TAIR|locus:2124311	357	CAD5 "cinnamyl alcohol dehydro	0.920	0.809	0.480	8.6e-72
UNIPROTKB|O24562	367	CAD "Probable cinnamyl alcohol	0.910	0.779	0.489	1.4e-71

TAIR|locus:2005528 ELI3-2 "elicitor-activated gene 3-2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
 Identities = 198/282 (70%), Positives = 225/282 (79%)

Query:    11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVP 70
             K AFG AAKD SGVLSPF F+RR TGEKDV FKV  CGICHSDLHM+KNEWG + YP+VP
Sbjct:     7 KEAFGLAAKDNSGVLSPFSFTRRETGEKDVRFKVLFCGICHSDLHMVKNEWGMSTYPLVP 66

Query:    71 GHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD 130
             GHEIVGVVTEVG+KV+KFK G+KVGVGC+V SC SCDSC   +ENYCPK I TY   Y+D
Sbjct:    67 GHEIVGVVTEVGAKVTKFKTGEKVGVGCLVSSCGSCDSCTEGMENYCPKSIQTYGFPYYD 126

Query:   131 GTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXX 190
              TITYGGYSD MV +E FV+RIP+  PLDA APLLCAGITVYSP++++GLDKPGM     
Sbjct:   127 NTITYGGYSDHMVCEEGFVIRIPDNLPLDAAAPLLCAGITVYSPMKYHGLDKPGMHIGVV 186

Query:   191 XXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
                       KFAKAMG KVTVISTS  K+ EAI RLGAD+FLVSRD  +++ AMGTMDG
Sbjct:   187 GLGGLGHVGVKFAKAMGTKVTVISTSEKKRDEAINRLGADAFLVSRDPKQIKDAMGTMDG 246

Query:   251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLL 292
             IIDTVSA H L+PL+GLLK +GKLV+VGAPEKPLELP   L+
Sbjct:   247 IIDTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLI 288

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0046029 "mannitol dehydrogenase activity" evidence=IDA

GO:0047681 "aryl-alcohol dehydrogenase (NADP+) activity" evidence=IDA

GO:0009617 "response to bacterium" evidence=IEP

GO:0009626 "plant-type hypersensitive response" evidence=IGI

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA

GO:0009809 "lignin biosynthetic process" evidence=IEP

GO:0006865 "amino acid transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2005527 ELI3-1 "elicitor-activated gene 3-1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1023 (365.2 bits), Expect = 2.9e-103, P = 2.9e-103
 Identities = 194/286 (67%), Positives = 223/286 (77%)

Query:    11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVP 70
             K AFG AAKD SG+LSPF FSRRATGEKDV FKV  CGICH+DL M KNEWG T YP+VP
Sbjct:     7 KEAFGLAAKDESGILSPFSFSRRATGEKDVRFKVLFCGICHTDLSMAKNEWGLTTYPLVP 66

Query:    71 GHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD 130
             GHEIVGVVTEVG+KV KF  GDKVGVG M GSCRSCDSC    ENYCPK+I+T   K  D
Sbjct:    67 GHEIVGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKMILTSGAKNFD 126

Query:   131 GTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXX 190
              T+T+GGYSD MV  E F++RIP+  PLD  APLLCAG+TVYSP++++GLDKPGM     
Sbjct:   127 DTMTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGLDKPGMHIGVV 186

Query:   191 XXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
                       KFAKAMG KVTVISTS  K+ EA+ RLGAD+FLVSRD  +M+ AMGTMDG
Sbjct:   187 GLGGLGHVAVKFAKAMGTKVTVISTSERKRDEAVTRLGADAFLVSRDPKQMKDAMGTMDG 246

Query:   251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
             IIDTVSA HPL+PL+GLLK++GKLV+VGAP +PLELP F L+ G +
Sbjct:   247 IIDTVSATHPLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRK 292

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009617 "response to bacterium" evidence=IEP

GO:0009626 "plant-type hypersensitive response" evidence=IGI

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA

GO:0009809 "lignin biosynthetic process" evidence=IEP

TAIR|locus:2120968 CAD6 "cinnamyl alcohol dehydrogenase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 953 (340.5 bits), Expect = 7.6e-96, P = 7.6e-96
 Identities = 175/291 (60%), Positives = 221/291 (75%)

Query:     6 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTI 65
             E+E    AFGWAA+D+SG LSPF FSRR TGE++V  KV +CGICHSDLH +KNEW ++I
Sbjct:     7 EKEQSVEAFGWAARDSSGHLSPFVFSRRKTGEEEVRVKVLYCGICHSDLHCLKNEWHSSI 66

Query:    66 YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
             YP+VPGHEI+G V+E+G+KVSKF +GDKVGVGC+V SCR+C+SC  D ENYC K I TY 
Sbjct:    67 YPLVPGHEIIGEVSEIGNKVSKFNLGDKVGVGCIVDSCRTCESCREDQENYCTKAIATYN 126

Query:   126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGM 185
               +HDGTI YGGYSD +V DE + V+IP   PL + APLLCAGI++YSP++++GL  P  
Sbjct:   127 GVHHDGTINYGGYSDHIVVDERYAVKIPHTLPLVSAAPLLCAGISMYSPMKYFGLTGPDK 186

Query:   186 XXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
                            +FAKA G KVTV+S++  K  +A++ LGAD FLVS D+D+M+AAM
Sbjct:   187 HVGIVGLGGLGHIGVRFAKAFGTKVTVVSSTTGKSKDALDTLGADGFLVSTDEDQMKAAM 246

Query:   246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
             GTMDGIIDTVSA H + PLIGLLKS GKLVL+GA EKP ++ AFSL++G +
Sbjct:   247 GTMDGIIDTVSASHSISPLIGLLKSNGKLVLLGATEKPFDISAFSLILGRK 297

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IEP

TAIR|locus:2136278 CAD9 "cinnamyl alcohol dehydrogenase 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
 Identities = 174/296 (58%), Positives = 216/296 (72%)

Query:     1 MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
             M ++PE EHP   FGW A+D SGVLSPFHFSRR  GE DVT K+  CG+CH+DLH IKN+
Sbjct:     1 MAKSPETEHPNKVFGWGARDKSGVLSPFHFSRRDNGENDVTVKILFCGVCHTDLHTIKND 60

Query:    61 WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
             WG + YP+VPGHEIVG+ T+VG  V+KFK GD+VGVG + GSC+SC+SC  DLENYCP++
Sbjct:    61 WGYSYYPVVPGHEIVGIATKVGKNVTKFKEGDRVGVGVISGSCQSCESCDQDLENYCPQM 120

Query:   121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
               TY     DGT  YGGYS+ +V D+ FV+R PE  P D+ APLLCAGITVYSP+++YG+
Sbjct:   121 SFTYNAIGSDGTKNYGGYSENIVVDQRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGM 180

Query:   181 DKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
              + G                K  KA G+KVTVIS+S +K  EAI  LGADSFLV+ D  +
Sbjct:   181 TEAGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSTKAEEAINHLGADSFLVTTDPQK 240

Query:   241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
             M+AA+GTMD IIDT+SAVH L PL+GLLK  GKL+ +G PEKPLELP F L++G +
Sbjct:   241 MKAAIGTMDYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRK 296

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IMP

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IMP

GO:0048046 "apoplast" evidence=IDA

TAIR|locus:2052516 CAD2 "cinnamyl alcohol dehydrogenase homolog 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 920 (328.9 bits), Expect = 2.4e-92, P = 2.4e-92
 Identities = 173/286 (60%), Positives = 211/286 (73%)

Query:    13 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGH 72
             AFGWAA D SGVLSPFHFSRR  GE DVT K+  CG+CHSDLH IKN WG + YPI+PGH
Sbjct:     7 AFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGH 66

Query:    73 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT 132
             EIVG+ T+VG  V+KFK GD+VGVG ++GSC+SC+SC  DLENYCPKV+ TY ++  DGT
Sbjct:    67 EIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGT 126

Query:   133 I-TYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKP-GMXXXXX 190
                 GGYSD++V D  FV+ IP+G P D+ APLLCAGITVYSP+++YG+ K  G      
Sbjct:   127 SRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVN 186

Query:   191 XXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
                       K  KA G++VTVIS S  K+ EAI+RLGADSFLV+ D  +M+ A+GTMD 
Sbjct:   187 GLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDF 246

Query:   251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
             IIDTVSA H L+PL  LLK  GKLV +G PEKPL+LP FSL++G +
Sbjct:   247 IIDTVSAEHALLPLFSLLKVNGKLVALGLPEKPLDLPIFSLVLGRK 292

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IC

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA

TAIR|locus:2052494 CAD3 "cinnamyl alcohol dehydrogenase homolog 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 913 (326.5 bits), Expect = 1.3e-91, P = 1.3e-91
 Identities = 171/285 (60%), Positives = 209/285 (73%)

Query:    13 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGH 72
             AFGWAA D SGVLSPFHFSRR  GE DVT K+  CG+CHSDLH IKN WG + YPI+PGH
Sbjct:     7 AFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGH 66

Query:    73 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT 132
             EIVG+ T+VG  V+KFK GD+VGVG ++GSC+SC+SC  DLENYCPKV+ TY ++  DGT
Sbjct:    67 EIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGT 126

Query:   133 ITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKP-GMXXXXXX 191
                GGYSD++V D  FV+ IP+G P D+ APLLCAGITVYSP+++YG+ K  G       
Sbjct:   127 RNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNG 186

Query:   192 XXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI 251
                      K  KA G++VTVIS S  K+ EAI+RLGADSFLV+ D  +M+ A+GTMD I
Sbjct:   187 LGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFI 246

Query:   252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
             IDTVSA H L+PL  LLK  GKLV +G  EKPL+LP F L++G +
Sbjct:   247 IDTVSAEHALLPLFSLLKVSGKLVALGLLEKPLDLPIFPLVLGRK 291

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IC

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA

UNIPROTKB|Q0JA75 CAD7 "Cinnamyl alcohol dehydrogenase 7" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 838 (300.0 bits), Expect = 1.2e-83, P = 1.2e-83
 Identities = 164/301 (54%), Positives = 204/301 (67%)

Query:     3 QAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG 62
             QAP  +H + A G AA D SG L+P   SRR TG+ DV  KV +CGICHSDLH IKNEW 
Sbjct:    13 QAPPPQHTRKAVGLAAHDDSGHLTPIRISRRKTGDDDVAIKVLYCGICHSDLHTIKNEWR 72

Query:    63 NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPK-VI 121
             N +YP+V GHEI GVVTEVG  V++FK GD+VGVGCMV +C  C+SC    ENYC   V+
Sbjct:    73 NAVYPVVAGHEITGVVTEVGKNVARFKAGDEVGVGCMVNTCGGCESCRDGCENYCSGGVV 132

Query:   122 MTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGT--------PLDATAPLLCAGITVYS 173
              TY +   DGT TYGGYSD +V  + FVVR P           PLD+ APLLCAG+TVY+
Sbjct:   133 FTYNSVDRDGTRTYGGYSDAVVVSQRFVVRFPSSAGGGAGAALPLDSGAPLLCAGVTVYA 192

Query:   174 PLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL 233
             P+R +GL + G                KFA+A G++VTVISTSP K+ EA+ERLGAD F+
Sbjct:   193 PMRQHGLCEAGKHVGVVGLGGLGHVAVKFARAFGMRVTVISTSPVKRQEALERLGADGFI 252

Query:   234 VSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLM 293
             VS +  EM+AAMGTM GII+T SA   +   + LLK +GK++LVG PEKPL++P F+L+ 
Sbjct:   253 VSTNASEMKAAMGTMHGIINTASASTSMHSYLALLKPKGKMILVGLPEKPLQIPTFALVG 312

Query:   294 G 294
             G
Sbjct:   313 G 313

GO:0009809 "lignin biosynthetic process" evidence=IMP

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IMP

TAIR|locus:2090704 ATCAD4 [Arabidopsis thaliana (taxid:3702)]

 Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
 Identities = 151/296 (51%), Positives = 191/296 (64%)

Query:     1 MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
             MG     E  K A GWAA+D SGVLSP+ ++ R+TG  DV  KV  CGICH+D+H IKN+
Sbjct:     1 MGSVEAGE--KKALGWAARDPSGVLSPYSYTLRSTGADDVYIKVICCGICHTDIHQIKND 58

Query:    61 WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
              G + YP+VPGHE+VG V EVGS VSKF VGD VGVG +VG C SC  C+ +LE YC K 
Sbjct:    59 LGMSNYPMVPGHEVVGEVLEVGSDVSKFTVGDVVGVGVVVGCCGSCKPCSSELEQYCNKR 118

Query:   121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
             I +Y + Y DG  T GG++D M+ ++ FVV+IPEG  ++  APLLCAG+TVYSPL  +GL
Sbjct:   119 IWSYNDVYTDGKPTQGGFADTMIVNQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGL 178

Query:   181 DKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
                G+               K AKAMG  VTVIS+S  KK EAIE LGAD ++VS D  E
Sbjct:   179 MASGLKGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVSSDPAE 238

Query:   241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
             MQ    ++D IIDTV   HPL P +  LK  GKL+L+G    PL+     +++G +
Sbjct:   239 MQRLADSLDYIIDTVPVFHPLDPYLACLKLDGKLILMGVINTPLQFVTPLVILGRK 294

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA;IMP

GO:0009809 "lignin biosynthetic process" evidence=IGI;TAS

GO:0080167 "response to karrikin" evidence=IEP

TAIR|locus:2124311 CAD5 "cinnamyl alcohol dehydrogenase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
 Identities = 139/289 (48%), Positives = 185/289 (64%)

Query:     8 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP 67
             E  +   GWAA+D SG+LSP+ ++ R TG +DV  ++  CGICH+DLH  KN+ G + YP
Sbjct:     5 EAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYP 64

Query:    68 IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK 127
             +VPGHE+VG V EVGS VSKF VGD VGVGC+VG C  C  C  DLE YCPK I +Y + 
Sbjct:    65 MVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDV 124

Query:   128 YHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXX 187
             Y +G  T GG++   V  + FVV+IPEG  ++  APLLCAG+TVYSPL  +GL +PG+  
Sbjct:   125 YINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRG 184

Query:   188 XXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT 247
                          K AKAMG  VTVIS+S  K+ EA++ LGAD +++  DQ +M     +
Sbjct:   185 GILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADS 244

Query:   248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
             +D +IDTV   H L P + LLK  GKL+L+G    PL+     L++G +
Sbjct:   245 LDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRK 293

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA;IMP

GO:0009809 "lignin biosynthetic process" evidence=IGI;IMP;TAS

GO:0005829 "cytosol" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

UNIPROTKB|O24562 CAD "Probable cinnamyl alcohol dehydrogenase" [Zea mays (taxid:4577)]

 Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
 Identities = 140/286 (48%), Positives = 187/286 (65%)

Query:    11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVP 70
             +   GWAA+D +G LSP+ ++ R TG +DV  KV +CGICH+D+H  KN  G + YP+VP
Sbjct:     8 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVP 67

Query:    71 GHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD 130
             GHE+VG V EVG +V+K+ VGD VGVG +VG CR C  C  ++E YC K I +Y + Y D
Sbjct:    68 GHEVVGEVVEVGPEVAKYGVGDVVGVGVIVGCCRECSPCKANVEQYCNKKIWSYNDVYTD 127

Query:   131 GTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXX 190
             G  T GG++  MV D+ FVV+IP G   +  APLLCAG+TVYSPL+ +GL  PG+     
Sbjct:   128 GRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNPGLRGGIL 187

Query:   191 XXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
                       K AKAMG  VTVIS+S  K++EA++ LGAD++LVS D   M AA  ++D 
Sbjct:   188 GLGGVGHMGVKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVSSDAAAMAAAADSLDY 247

Query:   251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
             IIDTV   HPL P + LLK  GKLVL+G   +PL   +  +++G +
Sbjct:   248 IIDTVPVHHPLEPYLALLKLDGKLVLLGVIGEPLSFVSPMVMLGRK 293

GO:0009809 "lignin biosynthetic process" evidence=IMP

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P42754	MTDH_PETCR	1, ., 1, ., 1, ., 2, 5, 5	0.7399	0.8694	0.8100	N/A	no
P42495	CADH1_ARACO	1, ., 1, ., 1, ., 1, 9, 5	0.5310	0.9203	0.8027	N/A	no
P30360	CADH2_TOBAC	1, ., 1, ., 1, ., 1, 9, 5	0.5384	0.9108	0.8011	N/A	no
O82035	CADH2_PICAB	1, ., 1, ., 1, ., 1, 9, 5	0.5432	0.9203	0.8095	N/A	no
P93257	MTDH_MESCR	1, ., 1, ., 1, ., 2, 5, 5	0.7491	0.9394	0.8171	N/A	no
Q08350	CADH7_PICAB	1, ., 1, ., 1, ., 1, 9, 5	0.5397	0.9203	0.8095	N/A	no
P31657	CADH_POPDE	1, ., 1, ., 1, ., 1, 9, 5	0.5224	0.9203	0.8095	N/A	no
P31655	CADH2_EUCGU	1, ., 1, ., 1, ., 1, 9, 5	0.5155	0.9203	0.8117	N/A	no
P0CH37	ADHC2_MYCS2	1, ., 1, ., 1, ., 2	0.5392	0.8789	0.7908	yes	no
P30359	CADH1_TOBAC	1, ., 1, ., 1, ., 1, 9, 5	0.5432	0.9203	0.8095	N/A	no
Q337Y2	CADH3_ORYSJ	1, ., 1, ., 1, ., 1, 9, 5	0.6363	0.9108	0.7814	yes	no
O64969	CADH_EUCGL	1, ., 1, ., 1, ., 1, 9, 5	0.5190	0.9203	0.8117	N/A	no
P50746	CADH_EUCBO	1, ., 1, ., 1, ., 1, 9, 5	0.5086	0.9171	0.8112	N/A	no
Q2KNL5	CADH1_OCIBA	1, ., 1, ., 1, ., 1, 9, 5	0.5259	0.9203	0.8095	N/A	no
Q2KNL6	GEDH1_OCIBA	1, ., 1, ., 1, ., 1, 8, 3	0.7060	0.9426	0.8222	N/A	no
P0CH36	ADHC1_MYCS2	1, ., 1, ., 1, ., 2	0.5392	0.8789	0.7908	yes	no
P41637	CADH_PINTA	1, ., 1, ., 1, ., 1, 9, 5	0.5328	0.9203	0.8095	N/A	no
Q9ZRF1	MTDH_FRAAN	1, ., 1, ., 1, ., 2, 5, 5	0.8020	0.9331	0.8161	N/A	no
O82515	MTDH_MEDSA	1, ., 1, ., 1, ., 2, 5, 5	0.6520	0.9394	0.8217	N/A	no
Q6V4H0	10HGO_CATRO	1, ., 1, ., 1, ., 3, 2, 4	0.7702	0.9426	0.8222	N/A	no
Q40976	CADH_PINRA	1, ., 1, ., 1, ., 1, 9, 5	0.5328	0.9203	0.8095	N/A	no
O22380	CADH_LOLPR	1, ., 1, ., 1, ., 1, 9, 5	0.5202	0.9363	0.8144	N/A	no
Q38707	MTDH_APIGR	1, ., 1, ., 1, ., 2, 5, 5	0.6824	0.9426	0.8109	N/A	no
Q02972	CADH8_ARATH	1, ., 1, ., 1, ., 1, 9, 5	0.7455	0.9012	0.7883	yes	no
Q02971	CADH7_ARATH	1, ., 1, ., 1, ., 1, 9, 5	0.7128	0.9299	0.8179	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.963
3rd Layer	1.6.5	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	314
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	1e-171
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	1e-166
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	1e-139
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	1e-129
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	1e-115
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	1e-103
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	2e-67
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	1e-63
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	3e-61
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	4e-52
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	2e-46
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	4e-46
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	5e-46
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	7e-43
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	3e-38
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	1e-36
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	2e-34
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	3e-34
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	1e-33
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	4e-33
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	4e-32
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	5e-32
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	9e-32
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	2e-31
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	4e-31
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	7e-31
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	8e-31
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	4e-30
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	5e-29
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	2e-28
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	3e-28
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	3e-28
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	4e-26
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	2e-25
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	1e-24
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	7e-24
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	2e-23
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	6e-23
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	7e-23
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	2e-22
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	2e-22
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	3e-22
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	7e-22
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	1e-21
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	1e-19
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	3e-19
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	1e-18
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	3e-18
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	4e-18
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	5e-18
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	5e-18
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	6e-18
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	6e-18
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	7e-18
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	1e-17
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	6e-17
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	7e-17
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	8e-17
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	2e-16
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	5e-16
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	6e-16
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	7e-16
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	9e-16
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	1e-15
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	1e-15
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	4e-15
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	4e-15
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	5e-15
cd05281	341	cd05281, TDH, Threonine dehydrogenase	6e-15
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	6e-15
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	8e-15
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	2e-14
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	4e-14
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	5e-14
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	7e-14
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	1e-13
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	1e-13
smart00829	287	smart00829, PKS_ER, Enoylreductase	1e-13
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	2e-13
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	3e-13
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	1e-12
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	1e-12
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	2e-12
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	3e-12
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	3e-12
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	4e-12
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	6e-12
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	8e-12
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	1e-11
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	2e-11
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	3e-11
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	6e-11
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	3e-10
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	1e-09
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	2e-09
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	3e-09
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	6e-09
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	7e-09
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	2e-08
TIGR01202	308	TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacter	2e-08
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	5e-08
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	5e-08
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	1e-07
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	4e-07
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	6e-07
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	7e-07
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	1e-06
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	3e-06
cd08288	324	cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu	6e-06
cd05300	313	cd05300, 2-Hacid_dh_1, Putative D-isomer specific	2e-05
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	2e-05
pfam02826	175	pfam02826, 2-Hacid_dh_C, D-isomer specific 2-hydro	3e-05
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	5e-05
PRK13243	333	PRK13243, PRK13243, glyoxylate reductase; Reviewed	3e-04
cd05198	302	cd05198, formate_dh_like, Formate/glycerate and re	4e-04
cd12178	317	cd12178, 2-Hacid_dh_13, Putative D-isomer specific	6e-04
COG0111	324	COG0111, SerA, Phosphoglycerate dehydrogenase and	0.001
PRK07476	322	PRK07476, eutB, threonine dehydratase; Provisional	0.004
COG1052	324	COG1052, LdhA, Lactate dehydrogenase and related d	0.004

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score =  479 bits (1234), Expect = e-171
 Identities = 203/296 (68%), Positives = 247/296 (83%)

Query: 1   MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
           M ++PE+EHP+ AFGWAA+D SGVLSPFHFSRR  G++DVT K+ +CG+CHSDLH IKNE
Sbjct: 1   MAKSPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNE 60

Query: 61  WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
           WG T YPIVPGHEIVG+VT++G  V KFK GD+VGVG +VGSC+SC+SC  DLENYCPK+
Sbjct: 61  WGFTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKM 120

Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
           I TY +  HDGT  YGGYSD++V D+HFV+R P+  PLDA APLLCAGITVYSP+++YG+
Sbjct: 121 IFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGM 180

Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
            +PG H+GV GLGGLGHVAVK  KA G+KVTVIS+S +K+ EAI RLGADSFLVS D ++
Sbjct: 181 TEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEK 240

Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           M+AA+GTMD IIDTVSAVH L PL+GLLK  GKL+ +G PEKPLELP F L++G +
Sbjct: 241 MKAAIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRK 296

Length = 360

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  465 bits (1200), Expect = e-166
 Identities = 172/281 (61%), Positives = 209/281 (74%), Gaps = 2/281 (0%)

Query: 14  FGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHE 73
            G+AA+D SG L PF F RR  G  DV  K+T+CG+CHSDLH ++NEWG T YP+VPGHE
Sbjct: 1   KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHE 60

Query: 74  IVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI 133
           IVG+V  VGSKV+KFKVGD+VGVGC V SC +C+ C    E YCPK ++TY  KY DGTI
Sbjct: 61  IVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTI 120

Query: 134 TYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLG 193
           T GGY+D +V DE FV +IPEG    A APLLCAGITVYSPL+  G+  PG  VGVVG+G
Sbjct: 121 TQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKRNGV-GPGKRVGVVGIG 179

Query: 194 GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIID 253
           GLGH+AVKFAKA+G +VT  S SPSKK +A  +LGAD F+ ++D + M+ A G++D IID
Sbjct: 180 GLGHLAVKFAKALGAEVTAFSRSPSKKEDA-LKLGADEFIATKDPEAMKKAAGSLDLIID 238

Query: 254 TVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMG 294
           TVSA H L P + LLK  G LVLVGAPE+PL +P F L+ G
Sbjct: 239 TVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFG 279

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score =  397 bits (1022), Expect = e-139
 Identities = 183/285 (64%), Positives = 223/285 (78%), Gaps = 1/285 (0%)

Query: 13  AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGH 72
           AFGWAA D SGVLSPFHFSRR  GE DVT K+  CG+CHSDLH IKN WG + YPI+PGH
Sbjct: 7   AFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGH 66

Query: 73  EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT 132
           EIVG+ T+VG  V+KFK GD+VGVG ++GSC+SC+SC  DLENYCPKV+ TY ++  DGT
Sbjct: 67  EIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGT 126

Query: 133 ITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDK-PGMHVGVVG 191
              GGYSD++V D  FV+ IP+G P D+ APLLCAGITVYSP+++YG+ K  G  +GV G
Sbjct: 127 RNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNG 186

Query: 192 LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI 251
           LGGLGH+AVK  KA G++VTVIS S  K+ EAI+RLGADSFLV+ D  +M+ A+GTMD I
Sbjct: 187 LGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFI 246

Query: 252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           IDTVSA H L+PL  LLK  GKLV +G PEKPL+LP F L++G +
Sbjct: 247 IDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRK 291

Length = 375

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score =  371 bits (954), Expect = e-129
 Identities = 159/287 (55%), Positives = 198/287 (68%)

Query: 8   EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP 67
           E  K   GWAA+D SG LSP+ ++ R TG +DV  KV +CGICH+DLH IKN+ G + YP
Sbjct: 5   EAEKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYP 64

Query: 68  IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK 127
           +VPGHE+VG V EVGS VSKF VGD VGVG +VG C  C  C  DLE YC K I +Y + 
Sbjct: 65  MVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDV 124

Query: 128 YHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHV 187
           Y DG  T GG++  MV D+ FVV+IPEG   +  APLLCAG+TVYSPL  +GL + G+  
Sbjct: 125 YTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRG 184

Query: 188 GVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT 247
           G++GLGG+GH+ VK AKAMG  VTVIS+S  K+ EA+E LGAD +LVS D  EMQ A  +
Sbjct: 185 GILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAADS 244

Query: 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMG 294
           +D IIDTV   HPL P + LLK  GKL+L+G    PL+     L++G
Sbjct: 245 LDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLG 291

Length = 357

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  334 bits (859), Expect = e-115
 Identities = 130/291 (44%), Positives = 172/291 (59%), Gaps = 12/291 (4%)

Query: 16  WAAKDTS--GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHE 73
            AA   +  G L P        G  +V  K+  CG+CH+DLH  + +WG + YP+VPGHE
Sbjct: 1   KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHE 60

Query: 74  IVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI 133
           IVG V EVG+ V   KVGD+VGVG +VGSC  C+ C   LEN C K + T       G  
Sbjct: 61  IVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNT-------GYT 113

Query: 134 TYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLG 193
           T GGY++ MVAD  + V +P+G PL   APLLCAGITVYS LR  G  +PG  V V+G+G
Sbjct: 114 TQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRDAGP-RPGERVAVLGIG 172

Query: 194 GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIID 253
           GLGH+AV++A+AMG +   I+ SP K+  A  +LGAD  + S  + + QAA G  D I+ 
Sbjct: 173 GLGHLAVQYARAMGFETVAITRSPDKRELAR-KLGADEVVDSGAELDEQAAAGGADVILV 231

Query: 254 TVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELP-AFSLLMGEEEDSWWQH 303
           TV +       +G L+  G++VLVG PE P   P  F L+M  +  +   H
Sbjct: 232 TVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTH 282

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  305 bits (784), Expect = e-103
 Identities = 124/283 (43%), Positives = 157/283 (55%), Gaps = 12/283 (4%)

Query: 15  GWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEI 74
               K     L          G  +V  KV  CG+CH+DLH+ K +W     P++PGHEI
Sbjct: 6   AAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEI 65

Query: 75  VGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTIT 134
           VG V EVG  V+  KVGD+VGVG +V SC  C+ C    EN CP   +T       G  T
Sbjct: 66  VGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT-------GYTT 118

Query: 135 YGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG 194
            GGY++ +V    +VV+IPEG  L   APLLCAGIT Y  L+   + KPG  V VVG GG
Sbjct: 119 DGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKANV-KPGKWVAVVGAGG 177

Query: 195 LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDT 254
           LGH+AV++AKAMG +V  I+ S  K   A ++LGAD  + S D D ++A     D IIDT
Sbjct: 178 LGHMAVQYAKAMGAEVIAITRSEEKLELA-KKLGADHVINSSDSDALEAVKEIADAIIDT 236

Query: 255 VSAVHPLMPLIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGE 295
           V     L P +  L+  G LVLVG P       LPAF L++ E
Sbjct: 237 VGP-ATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKE 278

Length = 339

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  213 bits (544), Expect = 2e-67
 Identities = 102/268 (38%), Positives = 146/268 (54%), Gaps = 17/268 (6%)

Query: 33  RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
              G  +V  KV  CG+CHSD  + +       YP VPGHE+VG +  VG  VS++KVGD
Sbjct: 21  PLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY-GGYSDIMVADEHFVVR 151
           +VGVG   G C +CD+C      +C        N    G +T  GGY++ M+A    + R
Sbjct: 81  RVGVGWHGGHCGTCDACRRGDFVHC-------ENGKVTG-VTRDGGYAEYMLAPAEALAR 132

Query: 152 IPEGTPLDAT--APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK 209
           IP+   LDA   APLLCAG+T ++ LR  G  KPG  V V G+GGLGH+AV++A  MG +
Sbjct: 133 IPDD--LDAAEAAPLLCAGVTTFNALRNSGA-KPGDLVAVQGIGGLGHLAVQYAAKMGFR 189

Query: 210 VTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA--AMGTMDGIIDTVSAVHPLMPLIGL 267
              IS    K   A + LGA  ++ +  +D  +A   +G    I+ T      +  L+G 
Sbjct: 190 TVAISRGSDKADLARK-LGAHHYIDTSKEDVAEALQELGGAKLILATAPNAKAISALVGG 248

Query: 268 LKSQGKLVLVGAPEKPLELPAFSLLMGE 295
           L  +GKL+++GA  +P+ +    L+MG 
Sbjct: 249 LAPRGKLLILGAAGEPVAVSPLQLIMGR 276

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  204 bits (521), Expect = 1e-63
 Identities = 93/264 (35%), Positives = 132/264 (50%), Gaps = 17/264 (6%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           G  +V  K+   G+CH+DLH    +W      P++ GHE  GVV  VG  VS  KVGD+V
Sbjct: 25  GPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKVGDRV 84

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
           GV  +  +C  C+ C    E  CP    +       G    G +++  +AD  +V  IP+
Sbjct: 85  GVKWLYDACGKCEYCRTGDETLCPNQKNS-------GYTVDGTFAEYAIADARYVTPIPD 137

Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVI 213
           G   +  APLLCAG+TVY  L+  GL KPG  V + G GG LGH+ V++AKAMG++V  I
Sbjct: 138 GLSFEQAAPLLCAGVTVYKALKKAGL-KPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAI 196

Query: 214 STSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGTM--DGIIDTVSAVHPLMPLIGLL 268
                K  E  + LGAD+F+  +  D    ++   G      ++ T  +       +  L
Sbjct: 197 DVGDEKL-ELAKELGADAFVDFKKSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYL 255

Query: 269 KSQGKLVLVGAPEK-PLELPAFSL 291
           +  G LV VG P    + L  F L
Sbjct: 256 RPGGTLVCVGLPPGGFIPLDPFDL 279

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  197 bits (504), Expect = 3e-61
 Identities = 93/273 (34%), Positives = 129/273 (47%), Gaps = 14/273 (5%)

Query: 25  LSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSK 84
           L          G  +V  KV  CG+C +DLH+++ +      P++PGHEIVG V  VG  
Sbjct: 17  LRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPG 76

Query: 85  VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVA 144
           V++F VGD+VGV  +  +C  C  C    EN C     T       G    GGY++ MVA
Sbjct: 77  VTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT-------GYTVDGGYAEYMVA 129

Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAK 204
           DE F   IPE    +  APLLCAGI  Y  L+  GL KPG  +G+ G G   H+A++ A+
Sbjct: 130 DERFAYPIPEDYDDEEAAPLLCAGIIGYRALKLAGL-KPGQRLGLYGFGASAHLALQIAR 188

Query: 205 AMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 264
             G +V   + S   +  A E LGAD    S D          +D  I        +   
Sbjct: 189 YQGAEVFAFTRSGEHQELARE-LGADWAGDSDDLPP-----EPLDAAIIFAPVGALVPAA 242

Query: 265 IGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEE 297
           +  +K  G++VL G     +    + LL GE+ 
Sbjct: 243 LRAVKKGGRVVLAGIHMSDIPAFDYELLWGEKT 275

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  172 bits (437), Expect = 4e-52
 Identities = 81/260 (31%), Positives = 122/260 (46%), Gaps = 18/260 (6%)

Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
           +V  +V   G+C +DLH+ +  +      P++ GHE  GVV EVG  V+  KVGD+V V 
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60

Query: 98  CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTP 157
             +G C +C+ C                     G    GG+++ +V     +V +P+G  
Sbjct: 61  PNLG-CGTCELCR-----------ELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLS 108

Query: 158 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217
           L+  A L     T Y  LR  G+ KPG  V V+G GG+G +A + AKA G +V V   S 
Sbjct: 109 LEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGARVIVTDRSD 168

Query: 218 SKKSEAIERLGADSFLVSRDQDEMQAAMGT----MDGIIDTVSAVHPLMPLIGLLKSQGK 273
            K  E  + LGAD  +  +++D  +    T     D +ID V     L   + LL+  G+
Sbjct: 169 EKL-ELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGR 227

Query: 274 LVLVGAPEKPLELPAFSLLM 293
           +V+VG       L     L+
Sbjct: 228 IVVVGGTSGGPPLDDLRRLL 247

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  159 bits (405), Expect = 2e-46
 Identities = 89/267 (33%), Positives = 119/267 (44%), Gaps = 21/267 (7%)

Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNT---IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
            V  +V   G+CHSDLH+I   WG       P   GHE  G V EVGS V   K GD V 
Sbjct: 27  QVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKEGDPVV 86

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
           V    G C +C  C    ENYC                T GG+++ ++     +V++P G
Sbjct: 87  VHPPWG-CGTCRYCRRGEENYCENARFPGIG-------TDGGFAEYLLVPSRRLVKLPRG 138

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDK-PGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVI 213
                 APL  AG+T Y  ++       PG  V V+G+GGLGH+AV+  +A+    V  +
Sbjct: 139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAV 198

Query: 214 STSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLIGLL 268
             S      A ERLGAD  L + D D ++       G     +ID V +   L     LL
Sbjct: 199 DRSEEALKLA-ERLGADHVLNASD-DVVEEVRELTGGRGADAVIDFVGSDETLALAAKLL 256

Query: 269 KSQGKLVLVGAPEKPLELPAFSLLMGE 295
              G+ V+VG       LP   L+  E
Sbjct: 257 AKGGRYVIVGYGGH-GRLPTSDLVPTE 282

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  158 bits (403), Expect = 4e-46
 Identities = 86/258 (33%), Positives = 118/258 (45%), Gaps = 26/258 (10%)

Query: 38  KDVTFKVTHCGICHSDLHMIKNEW----GNTI--------YPIVPGHEIVGVVTEVGSKV 85
            +V  KVT CG+CHSDLH+    +    G T+         P+V GHEIVG V  VG   
Sbjct: 26  TEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAVGPDA 85

Query: 86  SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVAD 145
           +  KVGDKV V   +G C  C  C    EN C K           G    GGY++ ++  
Sbjct: 86  ADVKVGDKVLVYPWIG-CGECPVCLAGDENLCAK-------GRALGIFQDGGYAEYVIVP 137

Query: 146 EHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA 205
               +  P G      A L C+G+T YS ++          V ++G GGLG +A+   KA
Sbjct: 138 HSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKA 197

Query: 206 MG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDE----MQAAMGTMDGIIDTVSAVHP 260
           +G   + V+    +K   A    GAD  +   D D     ++AA G +D +ID V+    
Sbjct: 198 LGPANIIVVDIDEAKLEAAKAA-GADVVVNGSDPDAAKRIIKAAGGGVDAVIDFVNNSAT 256

Query: 261 LMPLIGLLKSQGKLVLVG 278
                 +L   GKLVLVG
Sbjct: 257 ASLAFDILAKGGKLVLVG 274

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  158 bits (402), Expect = 5e-46
 Identities = 89/268 (33%), Positives = 117/268 (43%), Gaps = 28/268 (10%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNE-WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           G  +V  KV   G+CHSDLH++       T  P+  GHEI G V EVG+ V+ FKVGD+V
Sbjct: 25  GPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKVGDRV 84

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
            V   V  C +C  C     N C    M        G    GG+++ +V     +V +P+
Sbjct: 85  AV-PAVIPCGACALCRRGRGNLCLNQGMP-------GLGIDGGFAEYIVVPARALVPVPD 136

Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIS 214
           G P    A    A +T Y  +   G  KPG  V V+GLGGLG  AV+ AKAMG  V  + 
Sbjct: 137 GVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAVD 196

Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTV-----------SAVHPLMP 263
               K   A E LGAD  L S D          + G  D +            A      
Sbjct: 197 IKEEKLELAKE-LGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVGTQPTFEDAQK---- 251

Query: 264 LIGLLKSQGKLVLVGAPEKPLELPAFSL 291
               +K  G++V+VG     L +    L
Sbjct: 252 ---AVKPGGRIVVVGLGRDKLTVDLSDL 276

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  149 bits (379), Expect = 7e-43
 Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 12/244 (4%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  +V  KV   G+C+ DL   K  +    YP++ GHEIVG V EVG  V +FK GD+V 
Sbjct: 24  GPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGDRVI 83

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
           +   +  C  C+ C    EN C        N+   G    GG+++ +   E  +V++P+ 
Sbjct: 84  LYYYIP-CGKCEYCLSGEENLCR-------NRAEYGEEVDGGFAEYVKVPERSLVKLPDN 135

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVIS 214
              ++ A   C   T    L+  G+ K G  V V G  GG+G  A++ AKA+G +V  ++
Sbjct: 136 VSDESAALAACVVGTAVHALKRAGV-KKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVT 194

Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKL 274
            SP K  + ++ LGAD  +      E    +G  D +I+ V +   +   +  L   G+L
Sbjct: 195 RSPEKL-KILKELGADYVIDGSKFSEDVKKLGGADVVIELVGS-PTIEESLRSLNKGGRL 252

Query: 275 VLVG 278
           VL+G
Sbjct: 253 VLIG 256

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  138 bits (349), Expect = 3e-38
 Identities = 78/273 (28%), Positives = 117/273 (42%), Gaps = 17/273 (6%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           G  DV  +VT  GIC SDLH+ +  E       I+ GHE VG V EVG  V  FKVGD+V
Sbjct: 24  GPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVGV-VRGFKVGDRV 82

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSD-IMVADEHFVVRIP 153
            V   +  C  C  C     N C      +      G    GG+++ + V  +  + ++P
Sbjct: 83  VVEPNI-PCGHCRYCRAGEYNLCEN--PGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLP 139

Query: 154 EGTPLDATA--PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KV 210
           +G   +A A    L      ++        +PG  V VVG G +G +A+  AK +G   V
Sbjct: 140 DGIDEEAAALTEPLATAYHGHA---ERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVV 196

Query: 211 TVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLI 265
            V+  SP +   A E  GAD  +   + D     +    G     +I+ V +   L   +
Sbjct: 197 IVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPPALDQAL 256

Query: 266 GLLKSQGKLVLVGAPEKPLELPAFSLLMGEEED 298
             L+  G +V+VG            L++ +E  
Sbjct: 257 EALRPGGTVVVVGVYGGEDIPLPAGLVVSKELT 289

Length = 350

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  134 bits (340), Expect = 1e-36
 Identities = 79/281 (28%), Positives = 121/281 (43%), Gaps = 24/281 (8%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  +V  ++   G+CHSDLH++  +      P V GHE  GVV EVG  V+  K GD V 
Sbjct: 24  GPGEVLVRIAAAGLCHSDLHVVTGDLPAP-LPAVLGHEGAGVVEEVGPGVTGVKPGDHV- 81

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT-------------ITYGGYSDIM 142
           V   + +C +C  C+    N C         +  DGT                G +++  
Sbjct: 82  VLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYT 141

Query: 143 VADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKF 202
           V  E  VV+I +  PLD  A L C   T    +      +PG  V V+G GG+G  A++ 
Sbjct: 142 VVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQG 201

Query: 203 AKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI-----IDTVS 256
           A+  G  ++  +   P K   A  R GA   + + + D ++A     DG       + V 
Sbjct: 202 ARIAGASRIIAVDPVPEKLELAR-RFGATHTVNASEDDAVEAVRDLTDGRGADYAFEAVG 260

Query: 257 AVHPLMPLIGLLKSQGKLVLVG--APEKPLELPAFSLLMGE 295
               +   + + +  G  V+VG   P + + LPA  L + E
Sbjct: 261 RAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSE 301

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  128 bits (323), Expect = 2e-34
 Identities = 71/278 (25%), Positives = 114/278 (41%), Gaps = 25/278 (8%)

Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  ++T  G+CH+D H +  +     +P V GHE  G+V  VG  V+  K GD V +  
Sbjct: 29  EVLVRITATGVCHTDAHTLSGDD-PEGFPAVLGHEGAGIVEAVGEGVTSVKPGDHV-ILL 86

Query: 99  MVGSCRSCDSCAIDLENYCPKVIMT-YANKYHDGTITY-------------GGYSDIMVA 144
               C  C  C     N C  +  T       DGT                  +++  V 
Sbjct: 87  FTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVV 146

Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAK 204
            E  +V+I    PL+    L C   T    +      +PG  V V GLGG+G  A++ AK
Sbjct: 147 HEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAK 206

Query: 205 AMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAV 258
           A G  ++  +  +P K   A ++ GA  F+  ++ D++  A+     G  D   + V  V
Sbjct: 207 AAGAGRIIAVDINPEKLELA-KKFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNV 265

Query: 259 HPLMPLIGLLKSQGKLVLVGAPE--KPLELPAFSLLMG 294
             +   +      G  V++G     + +    F L+ G
Sbjct: 266 EVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG 303

Length = 366

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  127 bits (321), Expect = 3e-34
 Identities = 78/262 (29%), Positives = 123/262 (46%), Gaps = 20/262 (7%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G+ +V  KV + G+C+ DL  ++  +    YP++ GHE+VG V EVG  V  FK GD+V 
Sbjct: 24  GKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGDRV- 82

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
              +     +C+ C    E YC        N+   G    G +++        +V++P  
Sbjct: 83  ASLLYAPDGTCEYCRSGEEAYCK-------NRLGYGEELDGFFAEYAKVKVTSLVKVPPN 135

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS 214
              +    + C    VY  LR  G+ K G  V V G  GG+G  A++ AKA+G KV  ++
Sbjct: 136 VSDEGAVIVPCVTGMVYRGLRRAGV-KKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVT 194

Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKL 274
           +S SK  + + +  AD  +V     E    +G  D +I+TV     L   +  L   GK+
Sbjct: 195 SSESKA-KIVSKY-ADYVIVGSKFSEEVKKIGGADIVIETV-GTPTLEESLRSLNMGGKI 251

Query: 275 VLVG--APEKPLELPAFSLLMG 294
           + +G   P      P +SL +G
Sbjct: 252 IQIGNVDPS-----PTYSLRLG 268

Length = 334

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  125 bits (317), Expect = 1e-33
 Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 27/266 (10%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  +V  KV  CGIC SD+            P+V GHE  G V EVGS V    VGD+V 
Sbjct: 23  GPGEVLVKVKACGICGSDIPRYLGTG-AYHPPLVLGHEFSGTVEEVGSGVDDLAVGDRVA 81

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
           V  ++  C  C+ C     + C        ++        G +++ +      +++IP+ 
Sbjct: 82  VNPLL-PCGKCEYCKKGEYSLCSNYDY-IGSRRD------GAFAEYVSVPARNLIKIPDH 133

Query: 156 TPLDATA---PLLCAGITVY-SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-V 210
              +  A   P   A   V  + +        G  V V+G G +G +A+++ K +G K V
Sbjct: 134 VDYEEAAMIEPAAVALHAVRLAGI------TLGDTVVVIGAGTIGLLAIQWLKILGAKRV 187

Query: 211 TVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLI 265
             +     +K      LGAD  +  +++D  +      +G     +I+   +   +   +
Sbjct: 188 IAVDID-DEKLAVARELGADDTINPKEEDV-EKVRELTEGRGADLVIEAAGSPATIEQAL 245

Query: 266 GLLKSQGKLVLVGAPEKPLELPAFSL 291
            L +  GK+VLVG P   + L   + 
Sbjct: 246 ALARPGGKVVLVGIPYGDVTLSEEAF 271

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  125 bits (315), Expect = 4e-33
 Identities = 80/269 (29%), Positives = 122/269 (45%), Gaps = 31/269 (11%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI--VPGHEIVGVVTEVGSKV---SKFKV 90
            E ++  +V  CG+CHSDLH++K E     +P   V GHEI G V EVG  V       V
Sbjct: 24  KEGEILIRVAACGVCHSDLHVLKGE---LPFPPPFVLGHEISGEVVEVGPNVENPYGLSV 80

Query: 91  GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK--YHDGTI-------------TY 135
           GD+V VG  +  C  C  CA   EN C         K   +DGT              + 
Sbjct: 81  GDRV-VGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSM 139

Query: 136 GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGL 195
           GG ++  V     +  +PE      +A L CAG T Y  L+     +PG  V V+G+GG+
Sbjct: 140 GGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGV 199

Query: 196 GHVAVKFAKAMGVKVTV-ISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGTM--D 249
           G  A++ AKA G    + +     K ++A E LGA   + +  +D    ++   G    D
Sbjct: 200 GSSAIQLAKAFGASPIIAVDVRDEKLAKAKE-LGATHTVNAAKEDAVAAIREITGGRGVD 258

Query: 250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVG 278
            +++ +         + +++  G+ V+VG
Sbjct: 259 VVVEALGKPETFKLALDVVRDGGRAVVVG 287

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  121 bits (305), Expect = 4e-32
 Identities = 74/260 (28%), Positives = 111/260 (42%), Gaps = 41/260 (15%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           G  +V  +V   G+   D+ + +         P +PG E  GVV  VGS V+ FKVGD+V
Sbjct: 26  GPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRV 85

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
                VG                                  GGY++ +V    ++V +P+
Sbjct: 86  AALGGVGR--------------------------------DGGYAEYVVVPADWLVPLPD 113

Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVI 213
           G   +  A L  AG+T +  L      KPG  V V G  GG+G  A++ AKA+G  V V 
Sbjct: 114 GLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATV-VA 172

Query: 214 STSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM-----DGIIDTVSAVHPLMPLIGLL 268
             S S+K E ++ LGAD  +  R++D ++           D ++DTV         +  L
Sbjct: 173 VVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGG-DTFAASLAAL 231

Query: 269 KSQGKLVLVGAPEKPLELPA 288
              G+LV +GA      +P 
Sbjct: 232 APGGRLVSIGALSGGPPVPL 251

Length = 326

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score =  121 bits (305), Expect = 5e-32
 Identities = 76/251 (30%), Positives = 129/251 (51%), Gaps = 19/251 (7%)

Query: 43  KVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102
           K+ +CG+CH+DLH+   ++G+    I+ GHE +G+V EVG  V+  KVGD+V +      
Sbjct: 31  KMEYCGVCHTDLHVANGDFGDKTGRIL-GHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEG 89

Query: 103 CRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSD--IMVADEHFVVRIPEGTPLDA 160
           C  C+ C    E  C  V        + G    GG ++  I+ AD  + V++PEG     
Sbjct: 90  CGHCEYCTTGRETLCRSVK-------NAGYTVDGGMAEQCIVTAD--YAVKVPEGLDPAQ 140

Query: 161 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSK 219
            + + CAG+T Y  ++  G+ KPG  + + G GGLG++A+++AK     KV  +  +  K
Sbjct: 141 ASSITCAGVTTYKAIKVSGI-KPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDK 199

Query: 220 KSEAIERLGADSFLVSRDQD----EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLV 275
            + A E +GAD  + S+  +     +Q   G     + T  A       +  +++ G++V
Sbjct: 200 LALAKE-VGADLTINSKRVEDVAKIIQEKTGGAHAAVVTAVAKAAFNQAVDAVRAGGRVV 258

Query: 276 LVGAPEKPLEL 286
            VG P + ++L
Sbjct: 259 AVGLPPESMDL 269

Length = 338

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  119 bits (302), Expect = 9e-32
 Identities = 74/252 (29%), Positives = 109/252 (43%), Gaps = 41/252 (16%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIY---PIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  KV   G+   DL + +           P++PGH++ GVV  VG  V+ FKVGD
Sbjct: 26  GPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGD 85

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
           +V  G M    R                               G Y++ +V     +   
Sbjct: 86  EV-FG-MTPFTRG------------------------------GAYAEYVVVPADELALK 113

Query: 153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVT 211
           P     +  A L  AG+T +  L   G  K G  V + G  GG+G  AV+ AKA G +  
Sbjct: 114 PANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGAR-- 171

Query: 212 VISTSPSKKSEAIERLGADSFLVSRDQD-EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKS 270
           VI+T+ +  ++ +  LGAD  +     D E  AA G +D ++DTV     L   + L+K 
Sbjct: 172 VIATASAANADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGG-ETLARSLALVKP 230

Query: 271 QGKLV-LVGAPE 281
            G+LV + G P 
Sbjct: 231 GGRLVSIAGPPP 242

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  120 bits (302), Expect = 2e-31
 Identities = 76/269 (28%), Positives = 114/269 (42%), Gaps = 28/269 (10%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
               V  +V  CG+C SD H  +    +   P VPGHE  GVV EVG  VS+++VGD+V 
Sbjct: 24  PPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGDRVT 83

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVAD--EHFVVRIP 153
           V   V  C +C  C     N C   +         G    G +++ +     +  +VR+P
Sbjct: 84  VP-FVLGCGTCPYCRAGDSNVCEHQVQP-------GFTHPGSFAEYVAVPRADVNLVRLP 135

Query: 154 EGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVI 213
           +       A L C   T +  L      KPG  V V G GG+G  AV  A A+G +V  +
Sbjct: 136 DDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGARVIAV 195

Query: 214 STSPSKKSEAIERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLL 268
                K   A   LGA + + + + +++ AA+     G     +D +         +  L
Sbjct: 196 DIDDDKLELA-RELGAVATVNASEVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASL 254

Query: 269 KSQGKLVLVGAPEKPLELPAFSLLMGEEE 297
           + +G+ V VG            L +GEE 
Sbjct: 255 RKRGRHVQVG------------LTLGEEA 271

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  119 bits (300), Expect = 4e-31
 Identities = 88/287 (30%), Positives = 123/287 (42%), Gaps = 43/287 (14%)

Query: 34  ATGEKDVTFKVTHCGICHSDLH-------MIKNEWGNTIY-----PIVPGHEIVGVVTEV 81
                +V  KV  CGIC SDLH        I  E G+        P+  GHE  GVV EV
Sbjct: 21  PVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTE-GHPHLTGETAPVTLGHEFSGVVVEV 79

Query: 82  GSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI----TYGG 137
           GS V+ FKVGD+V V      C +C +C   L N C  +          G I      GG
Sbjct: 80  GSGVTGFKVGDRVVVEPT-IKCGTCGACKRGLYNLCDSL----------GFIGLGGGGGG 128

Query: 138 YSDIMVADEHFVVRIPEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG 194
           +++ +V   + V ++P+  PL+  A   PL  A    +  +R  G  KPG    V+G G 
Sbjct: 129 FAEYVVVPAYHVHKLPDNVPLEEAALVEPLAVA----WHAVRRSGF-KPGDTALVLGAGP 183

Query: 195 LGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM-----GTM 248
           +G + +   KA G  K+ V   S +++ E  E LGA   L   + D +         G +
Sbjct: 184 IGLLTILALKAAGASKIIVSEPSEARR-ELAEELGATIVLDPTEVDVVAEVRKLTGGGGV 242

Query: 249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGE 295
           D   D       L   I  L+ +G  V V   EKP+      L++ E
Sbjct: 243 DVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKE 289

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  118 bits (298), Expect = 7e-31
 Identities = 65/223 (29%), Positives = 88/223 (39%), Gaps = 12/223 (5%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS------KFK 89
               V  +V   G+C SD+H +         PI+ GHE VG V  +G  V+        K
Sbjct: 24  EPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEPLK 83

Query: 90  VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMV--ADEH 147
           VGD+V    +   C  C  C +     C            D     GGY++ +       
Sbjct: 84  VGDRV-TWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTA 142

Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG 207
             VR+P+  P +  AP  CA  TV + L   G    G  V V G G LG  AV  AK  G
Sbjct: 143 I-VRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAG 201

Query: 208 -VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 249
             +V VI  SP +  E     GAD+ +   +  + Q      D
Sbjct: 202 ARRVIVIDGSPERL-ELAREFGADATIDIDELPDPQRRAIVRD 243

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score =  111 bits (280), Expect = 8e-31
 Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 8/116 (6%)

Query: 37  EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96
             +V  +V   GIC SDLH+ + E      P++ GHE  G+V EVG  V+  KVGD+V V
Sbjct: 1   PGEVLVRVKAAGICGSDLHIYRGEPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVV 60

Query: 97  GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
             ++  C  C +C    EN CP       N    G    GG+++ +V     +V +
Sbjct: 61  YPLI-PCGKCAACREGRENLCP-------NGKFLGVHLDGGFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  116 bits (293), Expect = 4e-30
 Identities = 76/262 (29%), Positives = 117/262 (44%), Gaps = 30/262 (11%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  +V  KV  CGIC +D+  I+    +   P + GHEI G + EVG  V+ FKVGD+V 
Sbjct: 23  GPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGDRVF 82

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY-GGYSDIM-VADEHF----V 149
           V   V  C  C  C    EN CP         Y      Y GG+++ + V         V
Sbjct: 83  VAPHVP-CGECHYCLRGNENMCP--------NYKKFGNLYDGGFAEYVRVPAWAVKRGGV 133

Query: 150 VRIPEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM 206
           +++P+    +  A   PL C      +  R  G+ KPG  V V+G G +G +    AKA 
Sbjct: 134 LKLPDNVSFEEAALVEPLAC----CINAQRKAGI-KPGDTVLVIGAGPIGLLHAMLAKAS 188

Query: 207 G-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHP 260
           G  KV V   +  +   A ++LGAD  + + ++D ++      DG     +I    +   
Sbjct: 189 GARKVIVSDLNEFRLEFA-KKLGADYTIDAAEEDLVEKVRELTDGRGADVVIVATGSPEA 247

Query: 261 LMPLIGLLKSQGKLVLVGAPEK 282
               + L++  G+++  G   K
Sbjct: 248 QAQALELVRKGGRILFFGGLPK 269

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  113 bits (285), Expect = 5e-29
 Identities = 83/268 (30%), Positives = 121/268 (45%), Gaps = 34/268 (12%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  +V  KV  CGIC +DLH+ + E+G    P+VPGHE  GVV  VGSKV+ FKVGD+V 
Sbjct: 23  GPDEVLIKVAACGICGTDLHIYEGEFGAA-PPLVPGHEFAGVVVAVGSKVTGFKVGDRVA 81

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
           V   +  C  C  C     N C  +          G    GG+++ +V     V +IP+ 
Sbjct: 82  VDPNI-YCGECFYCRRGRPNLCENLTAV-------GVTRNGGFAEYVVVPAKQVYKIPDN 133

Query: 156 TPLDATA---PLLCAGITVYSPLRFYGLD----KPGMHVGVVGLGGLGHVAVKFAKAMGV 208
              +  A   PL CA          +GLD    KPG  V V G G +G +  +  K  G 
Sbjct: 134 LSFEEAALAEPLSCA---------VHGLDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGA 184

Query: 209 -KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM----DGIIDTVSAVHPLMP 263
            +VTV   +  K  E  ++LGA    V   +++ +A         D +I+       L  
Sbjct: 185 SRVTVAEPNEEKL-ELAKKLGATET-VDPSREDPEAQKEDNPYGFDVVIEATGVPKTLEQ 242

Query: 264 LIGLLKSQGKLVL--VGAPEKPLELPAF 289
            I   +  G +++  V AP+  + +  F
Sbjct: 243 AIEYARRGGTVLVFGVYAPDARVSISPF 270

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  110 bits (278), Expect = 2e-28
 Identities = 79/270 (29%), Positives = 118/270 (43%), Gaps = 22/270 (8%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  +V  KV   GIC SDLH+ K ++     P+V GHE  G + EVG  V  +KVGD+V 
Sbjct: 25  GPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVGDRVV 84

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
                 +C  C  C     N CP       ++   GT   GG+++ ++  E  +  +PE 
Sbjct: 85  SETTFSTCGRCPYCRRGDYNLCP-------HRKGIGTQADGGFAEYVLVPEESLHELPEN 137

Query: 156 TPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTV 212
             L+A A   PL  A   V          +PG  V V G G +G +A + AK  G  V V
Sbjct: 138 LSLEAAALTEPLAVAVHAVAERSGI----RPGDTVVVFGPGPIGLLAAQVAKLQGATVVV 193

Query: 213 ISTSPSKKSEAI-ERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLIG 266
           + T   +    + + LGAD+      +D  +      DG     +I+   AV  L   + 
Sbjct: 194 VGTEKDEVRLDVAKELGADAVNGGE-EDLAELVNEITDGDGADVVIECSGAVPALEQALE 252

Query: 267 LLKSQGKLVLVG-APEKPLELPAFSLLMGE 295
           LL+  G++V VG        +    ++  E
Sbjct: 253 LLRKGGRIVQVGIFGPLAASIDVERIIQKE 282

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score =  111 bits (278), Expect = 3e-28
 Identities = 68/196 (34%), Positives = 97/196 (49%), Gaps = 9/196 (4%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  ++  +V  CG+C +DLH+ + +       + PGHE+VG V   G+    F VGD+VG
Sbjct: 26  GPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVGDRVG 85

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
           +  +  +C  C  C    EN CP      A++Y  G  T GGY++       F  R+P G
Sbjct: 86  IAWLRRTCGVCRYCRRGAENLCP------ASRY-TGWDTDGGYAEYTTVPAAFAYRLPTG 138

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 215
                 APLLCAGI  Y  L    L  PG  +G+ G GG  H+  + A A G  V V++ 
Sbjct: 139 YDDVELAPLLCAGIIGYRALLRASL-PPGGRLGLYGFGGSAHLTAQVALAQGATVHVMTR 197

Query: 216 SPSKKSEAIERLGADS 231
             + +  A+  LGA S
Sbjct: 198 GAAARRLALA-LGAAS 212

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  111 bits (280), Expect = 3e-28
 Identities = 78/280 (27%), Positives = 119/280 (42%), Gaps = 37/280 (13%)

Query: 43  KVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102
           ++   GICH+DL  +++    T  P V GHE  GVV  VGS V+  K GD V +     S
Sbjct: 33  RIVATGICHTDLV-VRDGGLPTPLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLS--FAS 89

Query: 103 CRSCDSCAIDLENYCPKVI-MTYANKYHDGTITY--GGYSDI-------------MVADE 146
           C  C +C      YC     + ++ +  DG+        + +              V  E
Sbjct: 90  CGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHE 149

Query: 147 HFVVRIPEGTPLDATAPLLC-----AGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 201
             VV++ +  PL+  APL C     AG  V + L+     +PG  + V G G +G  AV 
Sbjct: 150 RNVVKVDKDVPLELLAPLGCGIQTGAG-AVLNVLK----PRPGSSIAVFGAGAVGLAAVM 204

Query: 202 FAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGT-MDGIIDTVS 256
            AK  G   +  +    S+   A E LGA   +  +++D    ++   G  +D  +DT  
Sbjct: 205 AAKIAGCTTIIAVDIVDSRLELAKE-LGATHVINPKEEDLVAAIREITGGGVDYALDTTG 263

Query: 257 AVHPLMPLIGLLKSQGKLVLVGAP--EKPLELPAFSLLMG 294
               +   +  L  +G L LVGAP     + L    LL+ 
Sbjct: 264 VPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVS 303

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  105 bits (264), Expect = 4e-26
 Identities = 79/257 (30%), Positives = 115/257 (44%), Gaps = 17/257 (6%)

Query: 29  HFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP-IVPGHEIVGVVTEVGSKVSK 87
            F     G  +V  +V   G+C SDLH   +      Y  ++PGHE  GVV  VG  V+ 
Sbjct: 16  EFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTH 75

Query: 88  FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH 147
           F+VGD+V V   VG C +C +C       C      Y      G    GG+++ M+  E 
Sbjct: 76  FRVGDRVMVYHYVG-CGACRNCRRGWMQLCTSKRAAY------GWNRDGGHAEYMLVPEK 128

Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG 207
            ++ +P+       A LLC   T Y  LR  G+      V VVG G +G  A+  A+A+G
Sbjct: 129 TLIPLPDDLSFADGALLLCGIGTAYHALRRVGV-SGRDTVLVVGAGPVGLGALMLARALG 187

Query: 208 V-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPL 261
              V  +  SP +   A   LGAD F+++  QD++Q       G      I+        
Sbjct: 188 AEDVIGVDPSPERLELAKA-LGAD-FVINSGQDDVQEIRELTSGAGADVAIECSGNTAAR 245

Query: 262 MPLIGLLKSQGKLVLVG 278
              +  ++  G+LVLVG
Sbjct: 246 RLALEAVRPWGRLVLVG 262

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  104 bits (261), Expect = 2e-25
 Identities = 77/288 (26%), Positives = 119/288 (41%), Gaps = 43/288 (14%)

Query: 38  KDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
            +V  K+    +CH+D+  I+  +  T++P++ GHE  G+V  VG  V+  K GDKV + 
Sbjct: 28  NEVRIKMLATSVCHTDILAIE-GFKATLFPVILGHEGAGIVESVGEGVTNLKPGDKV-IP 85

Query: 98  CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT--ITYGG-----------YSDIMVA 144
             +G C  C +C     N C K     +    DGT   T  G           +S   V 
Sbjct: 86  LFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVV 145

Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAK 204
           DE++V +I    PL+    L C   T Y         +PG  V V GLG +G  A+  AK
Sbjct: 146 DENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAK 205

Query: 205 AMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD----EMQAAM------------GT 247
             G  ++  +  +  K  +A +  GA  F+  +D D    E+   M            G 
Sbjct: 206 IAGASRIIGVDINEDKFEKA-KEFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGN 264

Query: 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMG 294
            D + + + +              G  V+VG P    L +  F L++G
Sbjct: 265 ADLMNEALESTK---------LGWGVSVVVGVPPGAELSIRPFQLILG 303

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  102 bits (255), Expect = 1e-24
 Identities = 78/266 (29%), Positives = 119/266 (44%), Gaps = 27/266 (10%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
              +V  K+   G+CHSD H++  +     YPI+ GHE  GVVT+VG  V+  K GD V 
Sbjct: 25  KAGEVLVKLVASGLCHSDEHLVTGDLPMPRYPILGGHEGAGVVTKVGPGVTGVKPGDHV- 83

Query: 96  VGCMVGSCRSCDSCAIDLENYCPK--VIMTYANKYHDGTITY-------------GGYSD 140
           V   + +C  C  C+  L+N C     ++T  ++  DGT  +             G +S+
Sbjct: 84  VLSFIPACGRCRWCSTGLQNLCDLGAALLT-GSQISDGTYRFHADGQDVGQMCLLGTFSE 142

Query: 141 IMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAV 200
             V  E  VV+I +  PLD    + C   T +         +PG  V V+G+GG+G  AV
Sbjct: 143 YTVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAVNIADVRPGDTVVVMGIGGVGINAV 202

Query: 201 KFAKAMGVKVTVISTSPSK-KSEAIERLGADSFLVSRDQDEMQAAM----GTM-DGIIDT 254
           + A   G +  VI+  P + K E   + GA     S + + +Q       G   D  I T
Sbjct: 203 QGAAVAGAR-KVIAVDPVEFKREQALKFGATHAFASME-EAVQLVRELTNGQGADKTIIT 260

Query: 255 VSAVHPLM--PLIGLLKSQGKLVLVG 278
           V  V        +   +  G++V+ G
Sbjct: 261 VGEVDGEHIAEALSATRKGGRVVVTG 286

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score = 99.8 bits (249), Expect = 7e-24
 Identities = 74/298 (24%), Positives = 107/298 (35%), Gaps = 49/298 (16%)

Query: 33  RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
                 +V  KV   G+CH+DLH+I  +   T  P++ GHE  G+V  +G  V+  K GD
Sbjct: 21  APPKAGEVRIKVVATGVCHTDLHVIDGKL-PTPLPVILGHEGAGIVESIGPGVTTLKPGD 79

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY-----------------ANKYHDGTITY 135
           KV +      C  C  C     N C K   T                     +  GT T+
Sbjct: 80  KV-IPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTF 138

Query: 136 GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGL 195
             Y+   V  E  + +I    PL+    + C   T Y          PG    V GLGG+
Sbjct: 139 AEYT---VVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGV 195

Query: 196 GHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD--------EMQA--- 243
           G   +   KA G  ++  +  +  K  +A + LGA   +  RDQD        EM     
Sbjct: 196 GLSVIMGCKAAGASRIIAVDINKDKFEKAKQ-LGATECINPRDQDKPIVEVLTEMTDGGV 254

Query: 244 -----AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
                 +G+ D +   + A              G  V+VG P    E       +   
Sbjct: 255 DYAFEVIGSADTLKQALDATR---------LGGGTSVVVGVPPSGTEATLDPNDLLTG 303

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 97.4 bits (243), Expect = 2e-23
 Identities = 76/250 (30%), Positives = 110/250 (44%), Gaps = 26/250 (10%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  +V  +V   G+   D ++I N       P +PG E  GVV EVG  V   K GD+V 
Sbjct: 25  GPGEVLIRVKMAGVNPVDYNVI-NAVKVKPMPHIPGAEFAGVVEEVGDHVKGVKKGDRVV 83

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
           V   V    +CD C    E  C        N    G ++ GGY++ +V  E  + +IP+ 
Sbjct: 84  VYNRV-FDGTCDMCLSGNEMLC-------RNGGIIGVVSNGGYAEYIVVPEKNLFKIPDS 135

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVIS 214
              +  A L  A +T Y  L+  GL  PG  V V G  G  G  AV+ AK MG +V  +S
Sbjct: 136 ISDELAASLPVAALTAYHALKTAGL-GPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVS 194

Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLI-----GLLK 269
                + + ++  GAD  +V  D+ E +    T   + D V  ++ L          +L 
Sbjct: 195 -----RKDWLKEFGAD-EVVDYDEVEEKVKEIT--KMADVV--INSLGSSFWDLSLSVLG 244

Query: 270 SQGKLVLVGA 279
             G+LV  G 
Sbjct: 245 RGGRLVTFGT 254

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 96.4 bits (241), Expect = 6e-23
 Identities = 62/208 (29%), Positives = 87/208 (41%), Gaps = 40/208 (19%)

Query: 34  ATGEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           A GE  V  +V   G+   DL MI+ ++      P VPG E+ GVV  VG  V+ FKVGD
Sbjct: 26  APGE--VRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGFKVGD 83

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
           +V                                         GG+++ +V     V  +
Sbjct: 84  RVVALTG-----------------------------------QGGFAEEVVVPAAAVFPL 108

Query: 153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVT 211
           P+G   +  A L     T Y  L      +PG  V V+G  GG+G  AV+ AKA+G +V 
Sbjct: 109 PDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVI 168

Query: 212 VISTSPSKKSEAIERLGADSFLVSRDQD 239
             ++S  +K      LGAD  +  RD D
Sbjct: 169 AAASSE-EKLALARALGADHVIDYRDPD 195

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score = 97.1 bits (242), Expect = 7e-23
 Identities = 88/310 (28%), Positives = 130/310 (41%), Gaps = 34/310 (10%)

Query: 17  AAKDTSGVLSPFHFSR---------RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP 67
           A    +G  +P+  SR            G  +V  K+   G+CHSDL +I  +    + P
Sbjct: 4   AVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPRPL-P 62

Query: 68  IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN- 126
           +  GHE  GVV EVG  V+  +VGD V V   V SC  C  CA      C          
Sbjct: 63  MALGHEAAGVVVEVGEGVTDLEVGDHV-VLVFVPSCGHCRPCAEGRPALCEPGAAANGAG 121

Query: 127 ---------KYHDGTITY----GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYS 173
                    +   G I +      +++  V     VV+I +  PL+  A   CA +T   
Sbjct: 122 TLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVG 181

Query: 174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSF 232
            +      +PG  V VVGLGG+G  A+  A A G  +V  +  +  K + A E LGA + 
Sbjct: 182 AVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARE-LGATAT 240

Query: 233 LVSRDQDEMQ----AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVG--APEKPLEL 286
           + + D + ++       G +D   +   +V  L     + +  G  V  G   PE  L +
Sbjct: 241 VNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSV 300

Query: 287 PAFSLLMGEE 296
           PA SL+  EE
Sbjct: 301 PALSLV-AEE 309

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score = 95.3 bits (238), Expect = 2e-22
 Identities = 78/261 (29%), Positives = 117/261 (44%), Gaps = 25/261 (9%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGN---TIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  +V   GIC SDLH+     G      YP + GHE+ G V EVG  V+  KVGD
Sbjct: 23  GAGEVLVRVKRVGICGSDLHIYH---GRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
           +V V     SC  C +C     N C  + +        G    GG+++ +V     ++ +
Sbjct: 80  RV-VVDPYISCGECYACRKGRPNCCENLQVL-------GVHRDGGFAEYIVVPADALL-V 130

Query: 153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTV 212
           PEG  LD  A +    I  ++  R       G  V VVG G +G   ++ AKA G +V V
Sbjct: 131 PEGLSLDQAALVEPLAIGAHAVRR--AGVTAGDTVLVVGAGPIGLGVIQVAKARGARVIV 188

Query: 213 ISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM------DGIIDTVSAVHPLMPLIG 266
           +     +  E    LGAD  +   D+D + A +  +      D +ID       +   + 
Sbjct: 189 VDIDDERL-EFARELGADDTINVGDED-VAARLRELTDGEGADVVIDATGNPASMEEAVE 246

Query: 267 LLKSQGKLVLVGAPEKPLELP 287
           L+   G++VLVG  + P+  P
Sbjct: 247 LVAHGGRVVLVGLSKGPVTFP 267

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 95.4 bits (238), Expect = 2e-22
 Identities = 77/278 (27%), Positives = 116/278 (41%), Gaps = 35/278 (12%)

Query: 36  GEKDVTFKVTHCGICHSDLH-MIKNEWGNTI--YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  +V   GIC SDLH      +G      P+V GHE+ GVV  VG  V+    G 
Sbjct: 20  GPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQ 79

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY---ANKY-HDGTITYGGYSDIMVADEHF 148
           +V V      C +CD C     N C    M +   A ++ H      GG+ + +V D   
Sbjct: 80  RVAVNPSR-PCGTCDYCRAGRPNLCLN--MRFLGSAMRFPH----VQGGFREYLVVDASQ 132

Query: 149 VVRIPEGTPLDATA---PLLCA--GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFA 203
            V +P+G  L   A   PL  A   +     L        G  V V G G +G + V  A
Sbjct: 133 CVPLPDGLSLRRAALAEPLAVALHAVNRAGDLA-------GKRVLVTGAGPIGALVVAAA 185

Query: 204 KAMG---VKVTVISTSPSKKSEAIERLGADSFL-VSRDQ-DEMQAAMGTMDGIIDTVSAV 258
           +  G   +  T ++ +P         +GAD  + ++RD      A  G  D + +   A 
Sbjct: 186 RRAGAAEIVATDLADAP---LAVARAMGADETVNLARDPLAAYAADKGDFDVVFEASGAP 242

Query: 259 HPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
             L   + +++  G +V VG    P+ LP  + L+ +E
Sbjct: 243 AALASALRVVRPGGTVVQVGMLGGPVPLP-LNALVAKE 279

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 95.0 bits (237), Expect = 3e-22
 Identities = 72/270 (26%), Positives = 107/270 (39%), Gaps = 19/270 (7%)

Query: 35  TGEKDVTFKVTHCGICHSDLHMIKNEWGNTI---YPIVPGHEIVGVVTEVGSKVSKFKVG 91
            G  D   +VT   IC SDLH+     G      + ++ GHE VG V EVGS V + K G
Sbjct: 23  QGPHDAIVRVTATSICGSDLHIY---RGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79

Query: 92  DKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI--TYGGYSDIMVADEHFV 149
           D+V V C+   C  C  C      +C               I      Y  +  AD + +
Sbjct: 80  DRVSVPCIT-FCGRCRFCRRGYHAHCEN---GLWGWKLGNRIDGGQAEYVRVPYADMN-L 134

Query: 150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV- 208
            +IP+G P +    L     T +      G+ KPG  V V+G G +G  AV  A+ +G  
Sbjct: 135 AKIPDGLPDEDALMLSDILPTGFHGAELAGI-KPGSTVAVIGAGPVGLCAVAGARLLGAA 193

Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT----MDGIIDTVSAVHPLMPL 264
           ++  + ++P +   A E    D           Q    T    +D +I+ V         
Sbjct: 194 RIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTGGRGVDCVIEAVGFEETFEQA 253

Query: 265 IGLLKSQGKLVLVGAPEKPLELPAFSLLMG 294
           + +++  G +  VG   KP  LP      G
Sbjct: 254 VKVVRPGGTIANVGVYGKPDPLPLLGEWFG 283

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 93.4 bits (233), Expect = 7e-22
 Identities = 74/260 (28%), Positives = 106/260 (40%), Gaps = 45/260 (17%)

Query: 43  KVTHCGICHSDLHMIKNEWGNTI---YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99
           KV    +   D  + +      +   +P +PG +  G V  VGS V++FKVGD+V  G +
Sbjct: 32  KVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEV-FGRL 90

Query: 100 VGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG-TPL 158
                                               G  ++ +VA E  + + PEG +  
Sbjct: 91  -------------------------------PPKGGGALAEYVVAPESGLAKKPEGVSFE 119

Query: 159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STS 216
           +A A L  AG+T    LR  G  KPG  V + G  GG+G  AV+ AKA+G  VT + ST 
Sbjct: 120 EA-AALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST- 177

Query: 217 PSKKSEAIERLGADSFLVSRDQD--EMQAAMGTMDGIIDTVSAVHP-LMPLIGLLKSQGK 273
             + +E +  LGAD  +    +D   + A     D I D V      L      LK  G+
Sbjct: 178 --RNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGR 235

Query: 274 LVLVGAPEKPLELPAFSLLM 293
            V VG     L L    L +
Sbjct: 236 YVSVGGGPSGLLLVLLLLPL 255

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score = 93.3 bits (233), Expect = 1e-21
 Identities = 77/277 (27%), Positives = 119/277 (42%), Gaps = 31/277 (11%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKN-EWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  +V   GIC SD+H  K+   G+ +   P+V GHE  G V  VGS V+  KVGD
Sbjct: 21  GPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGD 80

Query: 93  KVGV--GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVV 150
           +V +  G     CR+C+ C     N CP +    A    DGT+        +     F  
Sbjct: 81  RVAIEPGV---PCRTCEFCKSGRYNLCPDMRF-AATPPVDGTLC-----RYVNHPADFCH 131

Query: 151 RIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKV 210
           ++P+   L+  A +    + V++  R     +PG  V V G G +G +    AKA G   
Sbjct: 132 KLPDNVSLEEGALVEPLSVGVHACRR--AGVRPGDTVLVFGAGPIGLLTAAVAKAFGATK 189

Query: 211 TVISTSPSKKSEAIERLGADSFLVSRDQD------EMQAAMGTM--DGIIDTV---SAVH 259
            V++     + E  + LGA   +  R +D      ++   +G    D +I+     S + 
Sbjct: 190 VVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQ 249

Query: 260 PLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
                I   +  G +VLVG  +  + LP  S     E
Sbjct: 250 ---TAIYATRPGGTVVLVGMGKPEVTLP-LSAASLRE 282

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score = 87.3 bits (217), Expect = 1e-19
 Identities = 70/224 (31%), Positives = 107/224 (47%), Gaps = 29/224 (12%)

Query: 39  DVTFKVTHCGICHSDLHMIKNEWGN--TIYP-IVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           D   K+    IC +DLH++K   G+  T+ P  + GHE VGVV EVGS V+ FKVGD+V 
Sbjct: 27  DAIVKMLKTTICGTDLHILK---GDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVGDRVL 83

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT------ITYGGYSDIMVADEHFV 149
           + C+  SC +C  C   L ++C        N   DGT      I +   S         +
Sbjct: 84  ISCIS-SCGTCGYCRKGLYSHCESGGWILGNLI-DGTQAEYVRIPHADNS---------L 132

Query: 150 VRIPEGTPLDATAPLLCAGI--TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG 207
            ++PEG  +D  A ++ + I  T Y      G  KPG  V +VG G +G  A+  A+   
Sbjct: 133 YKLPEG--VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYS 190

Query: 208 -VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
             K+ ++    ++  E  ++LGA   + S   D ++  +   DG
Sbjct: 191 PSKIIMVDLDDNRL-EVAKKLGATHTVNSAKGDAIEQVLELTDG 233

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 86.2 bits (214), Expect = 3e-19
 Identities = 63/199 (31%), Positives = 88/199 (44%), Gaps = 18/199 (9%)

Query: 38  KDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
            D   KVT   IC SDLH+ +    +T    V GHE VG V EVG +V   KVGD+V V 
Sbjct: 26  TDAIVKVTAAAICGSDLHIYRGHIPST-PGFVLGHEFVGEVVEVGPEVRTLKVGDRV-VS 83

Query: 98  CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGG----YSDIMVADEHFVVRIP 153
               +C  C  C       C K  +      + G+    G    Y  +  AD   ++++P
Sbjct: 84  PFTIACGECFYCRRGQSGRCAKGGLF----GYAGSPNLDGAQAEYVRVPFAD-GTLLKLP 138

Query: 154 EGTPLDATAPLLCAGI--TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KV 210
           +G   +A   LL   I  T Y   +     +PG  V V+G G +G  AV  A+ +G  +V
Sbjct: 139 DGLSDEAA--LLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARV 195

Query: 211 TVISTSPSKKSEAIERLGA 229
             +   P +   A   LGA
Sbjct: 196 FAVDPVPERLERA-AALGA 213

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score = 85.1 bits (211), Expect = 1e-18
 Identities = 81/283 (28%), Positives = 117/283 (41%), Gaps = 35/283 (12%)

Query: 38  KDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
            +V  K+   GIC SD H++  +   T +P++ GHE  G+V  VG  V+  K GDKV + 
Sbjct: 33  HEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVKPGDKV-IP 90

Query: 98  CMVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGT--ITYGG-----------YSDIMV 143
             V  C  C +C     N C K  +        DGT   T  G           +S+  V
Sbjct: 91  LFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTV 150

Query: 144 ADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFA 203
            DE  V +I    PL+    + C   T Y          PG    V GLGG+G  A+   
Sbjct: 151 VDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGC 210

Query: 204 KAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD----EMQAAM--GTMD------G 250
           KA G  ++  +  +  K ++A E LGA   +  +D      E+   M  G +D      G
Sbjct: 211 KAAGASRIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIG 269

Query: 251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLM 293
            +DT+ A      L    +  G  V+VG P     L    +L+
Sbjct: 270 RLDTMKAA-----LASCHEGYGVSVIVGVPPSSQNLSINPMLL 307

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 83.7 bits (207), Expect = 3e-18
 Identities = 77/271 (28%), Positives = 121/271 (44%), Gaps = 26/271 (9%)

Query: 37  EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96
           + DV  KV   G+C SD+  I    G   YPI  GHE  G V  VGS V     GD   V
Sbjct: 25  QDDVLVKVASSGLCGSDIPRIFKN-GAHYYPITLGHEFSGYVEAVGSGVDDLHPGD--AV 81

Query: 97  GCM-VGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
            C+ +  C +C  C     + C       A     G+   GG ++ +V     +  +P  
Sbjct: 82  ACVPLLPCFTCPECLRGFYSLC-------AKYDFIGSRRDGGNAEYIVVKRKNLFALPTD 134

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDK--PGMHVGVVGLGGLGHVAVKFAKAMGVK-VTV 212
            P++  A      ITV   L  + L +   G +V ++G G +G +A++ A A+G K VT 
Sbjct: 135 MPIEDGA--FIEPITV--GLHAFHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTA 190

Query: 213 ISTSPSKKSEAIERLGADSFLVSRDQ--DEMQAAMGTM--DGIIDTVSAVHPLMPL-IGL 267
           I  +  K + A + LGA     SR+    ++Q+ +  +  D +I   + V   + L I +
Sbjct: 191 IDINSEKLALA-KSLGAMQTFNSREMSAPQIQSVLRELRFDQLILETAGVPQTVELAIEI 249

Query: 268 LKSQGKLVLVGAPEKPLELPA--FSLLMGEE 296
              + +L LVG     L L +  F  ++ +E
Sbjct: 250 AGPRAQLALVGTLHHDLHLTSATFGKILRKE 280

Length = 347

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score = 83.1 bits (206), Expect = 4e-18
 Identities = 77/300 (25%), Positives = 116/300 (38%), Gaps = 65/300 (21%)

Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+ H  +CH+D++  + +    ++P + GHE  G+V  VG  V+  K GD V +  
Sbjct: 29  EVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKPGDHV-LPV 87

Query: 99  MVGSCRSCDSCAIDLENYCPKV-------IMTYANK----------YH-DGTITYGGYSD 140
             G C+ C  C  +  N C  +       +M    K          YH  GT T+  Y+ 
Sbjct: 88  FTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYT- 146

Query: 141 IMVADEHFVVRIPEGTPLDATAPLLC-------AGITVYSPLRFYGLDKPGMHVGVVGLG 193
             V     V +I    PLD    L C       A   V          K G  V + GLG
Sbjct: 147 --VVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKV-------KKGSTVAIFGLG 197

Query: 194 GLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD----EMQAAM--- 245
            +G    + A+  G  ++  +  +PSK  +A ++ G   F+  +D D    E+ A M   
Sbjct: 198 AVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFGVTEFVNPKDHDKPVQEVIAEMTGG 256

Query: 246 ---------GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA--FSLLMG 294
                    G +D +I     VH            G  VL+G P K         +LL G
Sbjct: 257 GVDYSFECTGNIDAMISAFECVHD---------GWGVTVLLGVPHKDAVFSTHPMNLLNG 307

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 82.7 bits (205), Expect = 5e-18
 Identities = 73/267 (27%), Positives = 105/267 (39%), Gaps = 51/267 (19%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  +V  KV   G+   D  +I        YP VPG +  GVV  VG+KV+ +KVGD+V 
Sbjct: 26  GAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKVGDRVA 85

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
                                           YH      G +++  V D   V+ +P+ 
Sbjct: 86  --------------------------------YHASLARGGSFAEYTVVDARAVLPLPDS 113

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVG-----VVGLGGLGHVAVKFAKAMGVKV 210
              +  A L CAG+T Y  L      K  +  G       G GG+G  AV+ AK  G  +
Sbjct: 114 LSFEEAAALPCAGLTAYQALF----KKLRIEAGRTILITGGAGGVGSFAVQLAKRAG--L 167

Query: 211 TVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLI 265
            VI+T   +  E ++ LGAD  +   D+D  +       G     ++DTV        L 
Sbjct: 168 RVITTCSKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAA-LA 226

Query: 266 GLLKSQGKLV-LVGAPEKPLELPAFSL 291
             L   G LV + G P+     P F+ 
Sbjct: 227 PTLAFNGHLVCIQGRPDAS-PDPPFTR 252

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 82.9 bits (205), Expect = 5e-18
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 27/277 (9%)

Query: 25  LSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKN-EWGNTIY--PIVPGHEIVGVVTEV 81
           + PF       G  DV  ++   GIC SD+H +K     + +   P+V GHE  G++ EV
Sbjct: 31  IQPFKLP--PLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEV 88

Query: 82  GSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDI 141
           GS+V    VGD+V +   + SC  C+ C     N CP++      K+      +G  ++ 
Sbjct: 89  GSEVKHLVVGDRVALEPGI-SCWRCNLCKEGRYNLCPEM------KFFATPPVHGSLANQ 141

Query: 142 MVADEHFVVRIPEGTPLDATAPLLCAGITV-YSPLRFYGLDKPGMHVGVVGLGGLGHVAV 200
           +V       ++PE   L+  A  +C  ++V     R   +  P  +V V+G G +G V +
Sbjct: 142 VVHPADLCFKLPENVSLEEGA--MCEPLSVGVHACRRANIG-PETNVLVMGAGPIGLVTM 198

Query: 201 KFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLV--SRDQD------EMQAAMGT-MDG 250
             A+A G  ++ ++     + S A + LGAD  ++  +  +D      E+Q AMG  +D 
Sbjct: 199 LAARAFGAPRIVIVDVDDERLSVAKQ-LGADEIVLVSTNIEDVESEVEEIQKAMGGGIDV 257

Query: 251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELP 287
             D V     +   +   ++ GK+ LVG     + +P
Sbjct: 258 SFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVP 294

Length = 364

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 82.6 bits (205), Expect = 6e-18
 Identities = 63/262 (24%), Positives = 100/262 (38%), Gaps = 47/262 (17%)

Query: 43  KVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102
           KV    +   D       +  + YP + G +  G V EVGS V++FKVGD+V  G + G 
Sbjct: 32  KVKAVALNPVDWKHQDYGFIPS-YPAILGCDFAGTVVEVGSGVTRFKVGDRV-AGFVHG- 88

Query: 103 CRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLD--A 160
                                     +      G + + +VAD     +IP+    +  A
Sbjct: 89  -------------------------GNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAA 123

Query: 161 TAP--LLCAGITVYS----PLRFYGLDKPGMHVGVVGLGG---LGHVAVKFAKAMGVKVT 211
           T P  L+ A + ++     PL             V+  GG   +G +A++ AK  G K  
Sbjct: 124 TLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYK-- 181

Query: 212 VISTSPSKKSEAIERLGADSFLVSRD----QDEMQAAMGTMDGIIDTVSAVHPLMPLIGL 267
           VI+T+  K  + ++ LGAD+     D    +D   A  G +   +D +S           
Sbjct: 182 VITTASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEA 241

Query: 268 LKS--QGKLVLVGAPEKPLELP 287
           L     GKLV +    +  E  
Sbjct: 242 LGRSGGGKLVSLLPVPEETEPR 263

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 82.7 bits (205), Expect = 6e-18
 Identities = 67/254 (26%), Positives = 108/254 (42%), Gaps = 23/254 (9%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           G  +V  +V    + H DL + +   G  +  P + G +  GVV  VG  V+  K G +V
Sbjct: 26  GPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVKPGQRV 85

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
            +   + SC  C+ C    EN C +  +        G    GGY++ +      ++ IP+
Sbjct: 86  VIYPGI-SCGRCEYCLAGRENLCAQYGIL-------GEHVDGGYAEYVAVPARNLLPIPD 137

Query: 155 GTPLD--ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVT 211
               +  A APL    +T +  L      +PG  V V G G G+G  A++ AK  G  V 
Sbjct: 138 NLSFEEAAAAPL--TFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVI 195

Query: 212 VISTSPSKKSEAIERLGADSFLVSRDQDEM------QAAMGTMDGIIDTVSAVHPLMPLI 265
             + S  K   A E LGAD +++   +++             +D +++ V A       +
Sbjct: 196 ATAGSEDKLERAKE-LGAD-YVIDYRKEDFVREVRELTGKRGVDVVVEHVGAAT-WEKSL 252

Query: 266 GLLKSQGKLVLVGA 279
             L   G+LV  GA
Sbjct: 253 KSLARGGRLVTCGA 266

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score = 82.7 bits (205), Expect = 7e-18
 Identities = 69/234 (29%), Positives = 105/234 (44%), Gaps = 25/234 (10%)

Query: 40  VTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99
           V  K+   G+CH+D + +       ++P++ GHE  G+V  VG  V+  K GD V +   
Sbjct: 30  VRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPGDHV-IPLY 88

Query: 100 VGSCRSCDSCAIDLENYCPKV-------IM-------TYANK--YH-DGTITYGGYSDIM 142
              C  C  C     N C K+       +M       +   K  YH  GT T+  Y+  +
Sbjct: 89  TPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYT--V 146

Query: 143 VADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKF 202
           VA+   V +I    PLD    L C   T Y  +      +PG  V V GLG +G   ++ 
Sbjct: 147 VAEIS-VAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQG 205

Query: 203 AKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE-MQAAMGTM-DGIID 253
           AKA G  ++  I  +P K   A ++ GA   +  +D D+ +Q  +  M DG +D
Sbjct: 206 AKAAGASRIIGIDINPDKFELA-KKFGATDCVNPKDHDKPIQQVLVEMTDGGVD 258

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 81.4 bits (202), Expect = 1e-17
 Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 40/191 (20%)

Query: 53  DLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAI 111
           DL ++   +      P++P  +  G V  VG  V++FKVGD+V                 
Sbjct: 43  DLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFKVGDRV----------------- 85

Query: 112 DLENYCPKVIMTYANKYHDGTITY------------GGYSDIMVADEHFVVRIPEGTPLD 159
                 P    T+   + DG  T             G  ++ +V  E  +VR P+    +
Sbjct: 86  -----VP----TFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFE 136

Query: 160 ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK 219
             A L CAG+T ++ L   G  KPG  V V G GG+   A++FAKA G +V + ++S  +
Sbjct: 137 EAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGARV-IATSSSDE 195

Query: 220 KSEAIERLGAD 230
           K E  + LGAD
Sbjct: 196 KLERAKALGAD 206

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 79.6 bits (197), Expect = 6e-17
 Identities = 67/251 (26%), Positives = 102/251 (40%), Gaps = 53/251 (21%)

Query: 40  VTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           V  +V  CG+  +DL   +  + +    P VPG E  G V  VG  V  FKVGD+V    
Sbjct: 29  VRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDRV---- 84

Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPL 158
            +G  R                              +GGY++++      V  +P+G   
Sbjct: 85  -MGLTR------------------------------FGGYAEVVNVPADQVFPLPDGMSF 113

Query: 159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVKFAKAMGVKVTVISTSP 217
           +  A      +T Y  L   G  +PG  V V    GG+G  A +  K +   VTV+ T+ 
Sbjct: 114 EEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPN-VTVVGTAS 172

Query: 218 SKKSEAIERLGADSFLVSRDQD---EM-QAAMGTMDGIIDTVSAVHPLMP-----LIGLL 268
           + K EA++  G    +  R QD   E+ + +   +D ++D       L          LL
Sbjct: 173 ASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLD------ALGGEDTRKSYDLL 226

Query: 269 KSQGKLVLVGA 279
           K  G+LV+ GA
Sbjct: 227 KPMGRLVVYGA 237

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score = 79.9 bits (198), Expect = 7e-17
 Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 26/212 (12%)

Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           D   +VT   IC SDLH+            + GHE +GVV EVG +V   KVGD+V V  
Sbjct: 27  DAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVGDRV-VVP 85

Query: 99  MVGSCRSCDSCAIDLENYC----PKVIMTYANKYHDGTI-----TYGGYSD-----IMVA 144
              +C  C  C   L + C    P   M     +    I       GGY+      + V 
Sbjct: 86  FTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVP 145

Query: 145 DEHF-VVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD----KPGMHVGVVGLGGLGHVA 199
                  +IP+    D  A L  + I    P  ++  +    KPG  V V G G +G  A
Sbjct: 146 FADVGPFKIPDDLS-DEKA-LFLSDIL---PTGYHAAELAEVKPGDTVAVWGCGPVGLFA 200

Query: 200 VKFAKAMGVK-VTVISTSPSKKSEAIERLGAD 230
            + AK +G + V  I   P +   A   LGA+
Sbjct: 201 ARSAKLLGAERVIAIDRVPERLEMARSHLGAE 232

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 79.2 bits (196), Expect = 8e-17
 Identities = 54/228 (23%), Positives = 85/228 (37%), Gaps = 42/228 (18%)

Query: 64  TIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT 123
              P   G+E  GVV  VG+ V+ F VGD+V V                           
Sbjct: 55  PPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSV------------IPAADLG-------- 94

Query: 124 YANKYHDGTITYGGYSDIMVADEHFVVRIPEG-TPLDATAPLLCAGITVYSPLRFYGLDK 182
                      YG Y++  +     VV++P+G + ++A A L    +T Y  L      +
Sbjct: 95  ----------QYGTYAEYALVPAAAVVKLPDGLSFVEAAA-LWMQYLTAYGALVELAGLR 143

Query: 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241
           PG  V +      +G  A++ A A G  V   + +  K+   +  LGA   +V+ ++D +
Sbjct: 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLA-LGAAHVIVTDEEDLV 202

Query: 242 QAAMGTMDG-----IIDTVSAVHPLMP-LIGLLKSQGKLVLVGAPEKP 283
              +    G     + D V    P    L   L   G LV+ GA    
Sbjct: 203 AEVLRITGGKGVDVVFDPVGG--PQFAKLADALAPGGTLVVYGALSGE 248

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 78.1 bits (193), Expect = 2e-16
 Identities = 50/218 (22%), Positives = 78/218 (35%), Gaps = 42/218 (19%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P  PG+++VG V  +GS V+ F+VGD+V    +                           
Sbjct: 58  PFTPGYDLVGRVDALGSGVTGFEVGDRVA--ALT-------------------------- 89

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
                    GG ++ +  D  ++V +PEG        L+   +T Y  L        G  
Sbjct: 90  -------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQR 142

Query: 187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQA 243
           V + G  GG+G   ++ A   G    V  T+  +   A+  LGA + +  R +D      
Sbjct: 143 VLIHGASGGVGQALLELALLAG--AEVYGTASERNHAALRELGA-TPIDYRTKDWLPAML 199

Query: 244 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281
             G +D + D V            L   G LV  G   
Sbjct: 200 TPGGVDVVFDGVGGES-YEESYAALAPGGTLVCYGGNS 236

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 76.9 bits (190), Expect = 5e-16
 Identities = 60/231 (25%), Positives = 95/231 (41%), Gaps = 36/231 (15%)

Query: 43  KVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102
           +V   GIC++DL + K  +    +P VPGHE VG+V E         VG +V VG +  +
Sbjct: 30  RVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEAEL---VGKRV-VGEINIA 82

Query: 103 CRSCDSCAIDLENYCP--KVIMTYANKYHDGTITY-GGYSDIMVADEHFVVRIPEGTPLD 159
           C  C+ C   L  +CP   V+         G +   G +++ +      +  +P+  P +
Sbjct: 83  CGRCEYCRRGLYTHCPNRTVL---------GIVDRDGAFAEYLTLPLENLHVVPDLVPDE 133

Query: 160 A---TAPLLCAG-ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 215
                 PL  A  I    P+       PG  V V+G G LG +  +     G  V ++  
Sbjct: 134 QAVFAEPLAAALEILEQVPIT------PGDKVAVLGDGKLGLLIAQVLALTGPDVVLVG- 186

Query: 216 SPSKKSEAIERLGADSFLVSRDQDEMQA------AMGTMDGIIDTVSAVHP 260
             S+K     RLG ++ L    + E         A G+  G+   +  V P
Sbjct: 187 RHSEKLALARRLGVETVLPDEAESEGGGFDVVVEATGSPSGLELALRLVRP 237

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score = 77.2 bits (190), Expect = 6e-16
 Identities = 56/217 (25%), Positives = 89/217 (41%), Gaps = 17/217 (7%)

Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  ++   G+CH+D   +       ++P++ GHE  G+V  VG  V+  KVGD V +  
Sbjct: 28  EVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGDHV-IPL 86

Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGTITY-------------GGYSDIMVA 144
               C  C  C     N C  V  T       DGT  +               +S+  V 
Sbjct: 87  YTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVV 146

Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAK 204
            E  + +I    PL+    L C   T    +      + G  V V GLGG+G   ++ A+
Sbjct: 147 PEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGAR 206

Query: 205 AMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
                ++  I  +P+ K E  ++LGA   +   D D+
Sbjct: 207 MAKASRIIAIDINPA-KFELAKKLGATDCVNPNDYDK 242

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 75.8 bits (187), Expect = 7e-16
 Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 56/219 (25%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P+ PG+  VG V EVGS V+ FK GD+V                                
Sbjct: 21  PLPPGYSSVGRVVEVGSGVTGFKPGDRVFC------------------------------ 50

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLD--ATAPLLCAGITVYSPLRFYGLD--- 181
                   +G +++ +V   + +V +P+G P +  A   L    +         G+    
Sbjct: 51  --------FGPHAERVVVPANLLVPLPDGLPPERAALTALAATALN--------GVRDAE 94

Query: 182 -KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGADSFLVSRDQD 239
            + G  V VVGLG +G +A + AKA G    V+   P   + E  E LG  +  V+ D  
Sbjct: 95  PRLGERVAVVGLGLVGLLAAQLAKAAGA-REVVGVDPDAARRELAEALGP-ADPVAADTA 152

Query: 240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVG 278
           +     G  D +I+   +   L   + LL+ +G++VLVG
Sbjct: 153 DEIGGRG-ADVVIEASGSPSALETALRLLRDRGRVVLVG 190

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 75.9 bits (187), Expect = 9e-16
 Identities = 50/205 (24%), Positives = 71/205 (34%), Gaps = 56/205 (27%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKN---EWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G   V  +V  CG+C SDL         +     P  PGHE  G V  +G  V    VGD
Sbjct: 18  GPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGD 77

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
           +V                                      ++ G +++  +AD    V +
Sbjct: 78  RVAG------------------------------------LSGGAFAEYDLADADHAVPL 101

Query: 153 PEGTPLDATA----PLLCA--GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM 206
           P    LD  A    PL CA                  G  V V+G G +G + ++ A A 
Sbjct: 102 PSL--LDGQAFPGEPLGCALNVFRRGWIRA-------GKTVAVIGAGFIGLLFLQLAAAA 152

Query: 207 GV-KVTVISTSPSKKSEAIERLGAD 230
           G  +V  I   P++ + A   LGA 
Sbjct: 153 GARRVIAIDRRPARLALA-RELGAT 176

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 75.8 bits (187), Expect = 1e-15
 Identities = 62/216 (28%), Positives = 92/216 (42%), Gaps = 43/216 (19%)

Query: 69  VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY 128
           + G E+ G V  VG  VS++KVGD+V              CA+                 
Sbjct: 60  ILGLEVAGEVVAVGEGVSRWKVGDRV--------------CAL----------------- 88

Query: 129 HDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVG 188
               +  GGY++ +      V+ +PEG  L   A L     TV+S L   G  K G  V 
Sbjct: 89  ----VAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVL 144

Query: 189 V-VGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT 247
           +  G  G+G  A++ AKA G +V   + S  +K  A E LGAD  +  R++D ++     
Sbjct: 145 IHGGASGIGTTAIQLAKAFGARVFTTAGSD-EKCAACEALGADIAINYREEDFVEVVKAE 203

Query: 248 MDG-----IIDTVSAVHPLMPLIGLLKSQGKLVLVG 278
             G     I+D V   + L   I  L   G++V +G
Sbjct: 204 TGGKGVDVILDIVGGSY-LNRNIKALALDGRIVQIG 238

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score = 76.0 bits (187), Expect = 1e-15
 Identities = 83/301 (27%), Positives = 118/301 (39%), Gaps = 37/301 (12%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  +V   +  CG+CH+DLH  +    N  +P + GHE  GVV  VG  V+    GD V 
Sbjct: 25  GPGEVIVDIQACGVCHTDLHY-REGGINDEFPFLLGHEAAGVVEAVGEGVTDVAPGDYVV 83

Query: 96  VG--CMVGSCRSCDS-----CAIDLENYCPKVIMTYANKYHDGT-----ITYGGYSDIMV 143
           +    + G CR+C       C  D  N   K+ +T      DGT     +  G +++  +
Sbjct: 84  LNWRAVCGQCRACKRGRPWYC-FDTHNATQKMTLT------DGTELSPALGIGAFAEKTL 136

Query: 144 ADEHFVVRI-PEGTPLDATAPLLCAGITV-YSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 201
                  ++ P   P  A A LL  G+          G  K G  V V+G GG+G  A+ 
Sbjct: 137 VHAGQCTKVDPAADP--AAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIA 194

Query: 202 FAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVS 256
            A   G    +      +K E     GA   + S   D ++A      G     +ID V 
Sbjct: 195 GAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAVG 254

Query: 257 AVHPLMPLIGLLKSQGKLVLVGAP--EKPLELPAFSLLM--GEEEDSWWQHDWGDEGDSR 312
                          G +VLVG P  +  LELP   +    G  + SW    +GD    R
Sbjct: 255 RPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSW----YGDCLPER 310

Query: 313 D 313
           D
Sbjct: 311 D 311

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 73.8 bits (182), Expect = 4e-15
 Identities = 48/206 (23%), Positives = 73/206 (35%), Gaps = 50/206 (24%)

Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  +V   G+   D+ +              G E  G+VT VGS V+  KVGD+V    
Sbjct: 2   EVEVEVKAAGLNFRDVLVALGL--LPGDETPLGLECSGIVTRVGSGVTGLKVGDRV---M 56

Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPL 158
            +                                   G ++  +  D   VV+IP+    
Sbjct: 57  GLAP---------------------------------GAFATHVRVDARLVVKIPDSLSF 83

Query: 159 DATAPLLCAGITVYSPLRFYGLD-----KPGMHVGVV-GLGGLGHVAVKFAKAMGVKVTV 212
           +  A L  A +T Y     Y L      + G  V +    GG+G  A++ A+ +G +V  
Sbjct: 84  EEAATLPVAYLTAY-----YALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFA 138

Query: 213 ISTSPSKKSEAIERLG-ADSFLVSRD 237
              S  K+    E  G  D    SRD
Sbjct: 139 TVGSEEKREFLRELGGPVDHIFSSRD 164

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 74.3 bits (183), Expect = 4e-15
 Identities = 61/231 (26%), Positives = 86/231 (37%), Gaps = 38/231 (16%)

Query: 36  GEKDVTFKVTHCGICHSDLH-------MIKNEWGNTIY----PIVPGHEIVGVVTEVGSK 84
           G   V  KV  CGIC SDLH       M+ +  G ++      IV GHE  G V + G  
Sbjct: 22  GPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPG 81

Query: 85  VS-KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMV 143
              K KVG +V     +  C    SC I L                      GGY++ M+
Sbjct: 82  TERKLKVGTRV-TSLPLLLCGQGASCGIGL-----------------SPEAPGGYAEYML 123

Query: 144 ADEHFVVRIPEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAV 200
             E  ++R+P+G  ++  A   PL          +R   L  PG    V+G G +G   +
Sbjct: 124 LSEALLLRVPDGLSMEDAALTEPLAVG----LHAVRRARL-TPGEVALVIGCGPIGLAVI 178

Query: 201 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI 251
              KA GV   V S    ++      +GAD  +         A    +   
Sbjct: 179 AALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARA 229

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 74.0 bits (183), Expect = 5e-15
 Identities = 61/218 (27%), Positives = 90/218 (41%), Gaps = 43/218 (19%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
             + G E+ GVV  VG  V+ +KVGD+V              CA+               
Sbjct: 58  SDILGLEVAGVVVAVGPGVTGWKVGDRV--------------CAL--------------- 88

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
                 +  GGY++ +V     ++ +PEG  L   A L     T +  L   G  K G  
Sbjct: 89  ------LAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGET 142

Query: 187 VGV-VGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
           V +  G  G+G  A++ AKA+G +V   + S   K EA   LGAD  +  R +D  +   
Sbjct: 143 VLIHGGASGVGTAAIQLAKALGARVIATAGSEE-KLEACRALGADVAINYRTEDFAEEVK 201

Query: 246 GTMDG-----IIDTVSAVHPLMPLIGLLKSQGKLVLVG 278
               G     I+D V   + L   +  L   G+LVL+G
Sbjct: 202 EATGGRGVDVILDMVGGDY-LARNLRALAPDGRLVLIG 238

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 73.8 bits (182), Expect = 6e-15
 Identities = 71/263 (26%), Positives = 119/263 (45%), Gaps = 28/263 (10%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEW--GNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  KV    IC +D+H+ + +EW       P++ GHE  G V EVG  V++ KVGD
Sbjct: 24  GPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKVGD 83

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGTITYGGYSDIMVADEHFVVR 151
            V     +  C  C  C     + C    I+        G  T G +++ +V  E  + +
Sbjct: 84  YVSAETHI-VCGKCYQCRTGNYHVCQNTKIL--------GVDTDGCFAEYVVVPEENLWK 134

Query: 152 IPEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV 208
             +  P +  +   PL  A  TV +       D  G  V + G G +G +A+  AKA G 
Sbjct: 135 NDKDIPPEIASIQEPLGNAVHTVLAG------DVSGKSVLITGCGPIGLMAIAVAKAAGA 188

Query: 209 KVTVISTSPSKKSEAIER-LGADSFLVSRDQDEMQAAMGTMDGIIDTV--SAVHPLMPLI 265
              VI++ P+     + + +GAD  +  R++D ++    T    +D V   + +P     
Sbjct: 189 -SLVIASDPNPYRLELAKKMGADVVINPREEDVVEVKSVTDGTGVDVVLEMSGNPKAIEQ 247

Query: 266 GL--LKSQGKLVLVGAPEKPLEL 286
           GL  L   G++ ++G P  P+++
Sbjct: 248 GLKALTPGGRVSILGLPPGPVDI 270

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 73.7 bits (182), Expect = 6e-15
 Identities = 48/170 (28%), Positives = 71/170 (41%), Gaps = 43/170 (25%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKV-----GVGCMVGSCRSCDSCAIDLENYCPKVI 121
           P + G ++ GVV  VG  V++F+VGD+V     G+G + GS                   
Sbjct: 58  PAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGS------------------- 98

Query: 122 MTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD 181
                            ++  V D   +   P    +   A L   GIT +  L      
Sbjct: 99  ----------------LAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAV 142

Query: 182 KPGMHVGVV-GLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD 230
           + G  V +  G GG+GHVAV+ AKA G +  V +T+ S+K+     LGAD
Sbjct: 143 QAGQTVLIHGGAGGVGHVAVQLAKAAGAR--VYATASSEKAAFARSLGAD 190

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 73.4 bits (181), Expect = 8e-15
 Identities = 61/236 (25%), Positives = 97/236 (41%), Gaps = 40/236 (16%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P VPG +  GVV  VG  V   KVGD+V +   +G  R                      
Sbjct: 58  PYVPGSDGAGVVEAVGEGVDGLKVGDRVWL-TNLGWGRR--------------------- 95

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
                    G  ++ +V     +V +P+G   +  A L    +T Y  L      K G  
Sbjct: 96  --------QGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGET 147

Query: 187 VGVVG-LGGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSFLVSRDQDEMQAA 244
           V V G  G +GH AV+ A+  G    VI+T S ++ +E + + GAD+    R +D     
Sbjct: 148 VLVHGGSGAVGHAAVQLARWAG--ARVIATASSAEGAELVRQAGADAVFNYRAEDLADRI 205

Query: 245 MGTMDG-----IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGE 295
           +    G     II+ ++ V+ L   + +L   G++V+ G+      +P   L+  E
Sbjct: 206 LAATAGQGVDVIIEVLANVN-LAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKE 260

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 72.7 bits (179), Expect = 2e-14
 Identities = 58/238 (24%), Positives = 86/238 (36%), Gaps = 44/238 (18%)

Query: 49  ICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCD 107
           I  SDL  I   +G+    P VPG+E VGVV EVGS VS   VG +V     +G      
Sbjct: 38  INPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRV---LPLGG----- 89

Query: 108 SCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167
                                       G + + +VA    ++ +P+    +  A L   
Sbjct: 90  ---------------------------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYIN 122

Query: 168 GITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER 226
            +T +  L  Y    PG  V        +G + ++ AK +G K   +     +  E ++ 
Sbjct: 123 PLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEE-LKA 181

Query: 227 LGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA 279
           LGAD  + S  +D  Q              +D V        L   L+  G LV  G 
Sbjct: 182 LGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESAT-RLARSLRPGGTLVNYGL 238

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 71.8 bits (176), Expect = 4e-14
 Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 24/209 (11%)

Query: 37  EKDVTFKVTHCGICHSDLHMIKNEW-------GNTIYPIVPGHEIVGVVTEVGSKVSKFK 89
             ++  +V  CGIC SD+H+ + +        G T +P+V GHE  GVV + G  V  F+
Sbjct: 51  PDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFE 110

Query: 90  VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149
            GD V    M+  C  C +C     N+C  +     +   D     G +++ +  +  + 
Sbjct: 111 KGDPVTAEEMMW-CGMCRACRSGSPNHCKNLKELGFS--AD-----GAFAEYIAVNARYA 162

Query: 150 VRIPEGTPLDATAPLLCAGITVYSPLRFY-------GLDKPGMHVGVVGLGGLGHVAVKF 202
             I E   + +      AG  V      Y       G  +PG +V V G G +G  A+  
Sbjct: 163 WEINELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIAL 222

Query: 203 AKAMGV-KVTVISTSPSKKSEAIERLGAD 230
           AKA G  KV     S  +++ A E +GAD
Sbjct: 223 AKAAGASKVIAFEISEERRNLAKE-MGAD 250

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 71.5 bits (175), Expect = 5e-14
 Identities = 65/211 (30%), Positives = 90/211 (42%), Gaps = 18/211 (8%)

Query: 34  ATGEKDVTFKVTHCGICHSDLHMIKNEW-GNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
             G  DV  KV  CG+CH+DL         N   P+  GHEI G V + G+  + + +G 
Sbjct: 20  ELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGK 78

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
            V V  ++  C  C+ C       C    M        G    GG++  +V     +  +
Sbjct: 79  AVIVPAVI-PCGECELCKTGRGTICRAQKMP-------GNDMQGGFASHIVVPAKGLCVV 130

Query: 153 PE------GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM 206
            E      G PL+  + +  A  T Y      GL K G  V V+G GG+G   V+ AKAM
Sbjct: 131 DEARLAAAGLPLEHVSVVADAVTTPYQAAVQAGL-KKGDLVIVIGAGGVGGYMVQTAKAM 189

Query: 207 GVKVTVISTSPSKKSEAIERLGADSFLVSRD 237
           G  V  I   P  K E ++  GAD  L  +D
Sbjct: 190 GAAVVAIDIDPE-KLEMMKGFGADLTLNPKD 219

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 70.7 bits (173), Expect = 7e-14
 Identities = 53/198 (26%), Positives = 83/198 (41%), Gaps = 14/198 (7%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  KV    IC +D+H+   +EW  +    P V GHE+ G V  +G  V   KVGD
Sbjct: 22  GPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGD 81

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
            V V   +  C  C +C     + C    +        G  T G +++  V     + + 
Sbjct: 82  YVSVETHI-VCGKCYACRRGQYHVCQNTKIF-------GVDTDGCFAEYAVVPAQNIWKN 133

Query: 153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTV 212
           P+  P +        G  V++ L        G  V V G G +G +A+  AKA G    +
Sbjct: 134 PKSIPPEYATIQEPLGNAVHTVLAG---PISGKSVLVTGAGPIGLMAIAVAKASGAYPVI 190

Query: 213 ISTSPSKKSEAIERLGAD 230
           +S     + E  +++GA 
Sbjct: 191 VSDPNEYRLELAKKMGAT 208

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 70.2 bits (173), Expect = 1e-13
 Identities = 56/175 (32%), Positives = 76/175 (43%), Gaps = 39/175 (22%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P V G E  GVV  VG  V+ FKVGD+V                             YA 
Sbjct: 55  PFVLGVEGAGVVEAVGPGVTGFKVGDRVA----------------------------YAG 86

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
                    G Y++  V     +V++P+G   +  A LL  G+T +  LR     KPG  
Sbjct: 87  -------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDT 139

Query: 187 VGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSFLVSRDQD 239
           V V    GG+G +  ++AKA+G   TVI T S  +K+E     GAD  +  RD+D
Sbjct: 140 VLVHAAAGGVGLLLTQWAKALG--ATVIGTVSSEEKAELARAAGADHVINYRDED 192

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 70.7 bits (174), Expect = 1e-13
 Identities = 34/81 (41%), Positives = 41/81 (50%), Gaps = 6/81 (7%)

Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96
           D   ++T   IC SDLHM +   G T     +V GHE +G V EVGS V   KVGD+V V
Sbjct: 27  DAIVRITTTAICGSDLHMYR---GRTGAEPGLVLGHEAMGEVEEVGSAVESLKVGDRVVV 83

Query: 97  GCMVGSCRSCDSCAIDLENYC 117
              V  C  C +C   L   C
Sbjct: 84  PFNVA-CGRCRNCKRGLTGVC 103

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 69.3 bits (171), Expect = 1e-13
 Identities = 47/179 (26%), Positives = 68/179 (37%), Gaps = 54/179 (30%)

Query: 69  VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY 128
           V G E  GVVT VG  V+   VGD+V                                  
Sbjct: 25  VLGGECAGVVTRVGPGVTGLAVGDRVMG-------------------------------- 52

Query: 129 HDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD-----KP 183
               +  G ++  +V D   VV IP+G   +  A +    +T Y     Y L      +P
Sbjct: 53  ----LAPGAFATRVVTDARLVVPIPDGWSFEEAATVPVVFLTAY-----YALVDLARLRP 103

Query: 184 GMHVGV-VGLGGLGHVAVKFAKAMGVKV--TVISTSPSKKSEAIERLG--ADSFLVSRD 237
           G  V +    GG+G  A++ A+ +G +V  T    SP K+ + +  LG   D    SRD
Sbjct: 104 GESVLIHAAAGGVGQAAIQLARHLGAEVFATA--GSPEKR-DFLRALGIPDDHIFSSRD 159

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 69.5 bits (171), Expect = 2e-13
 Identities = 74/233 (31%), Positives = 108/233 (46%), Gaps = 40/233 (17%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEWG-NTI-YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  DV  KV    IC +D+H+   +EW   TI  P+V GHE VG V EVGS+V+ FKVGD
Sbjct: 24  GPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKVGD 83

Query: 93  KV-GVGCMV-GSCRSCDSCAIDLENYCPKVIMTYANKYH-------DGTITYGGYSDIMV 143
           +V G G +V G CR+C                  A + H        G    G +++ +V
Sbjct: 84  RVSGEGHIVCGHCRNC-----------------RAGRRHLCRNTKGVGVNRPGAFAEYLV 126

Query: 144 ADEHFVVRIPEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAV 200
                V +IP+  P D  A   P    G  V++ L F   D  G  V + G G +G +A 
Sbjct: 127 IPAFNVWKIPDDIPDDLAAIFDPF---GNAVHTALSF---DLVGEDVLITGAGPIGIMAA 180

Query: 201 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQAAMGTMDGI 251
             AK +G +  VI+     + E   ++GA   +    +D  ++ A +G  +G 
Sbjct: 181 AVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGF 233

Length = 341

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 65.4 bits (160), Expect = 3e-13
 Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 8/109 (7%)

Query: 194 GLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGTM- 248
           G+G  AV+ AKA+G  +V  +  S  K  E  + LGAD  +  RD+D    ++   G   
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKL-ELAKELGADHVINYRDEDFVERVRELTGGRG 59

Query: 249 -DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGE 295
            D +ID V A   L   + LL+  G++V+VG P   P+  P   LL+ E
Sbjct: 60  VDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDLLLKE 108

Length = 131

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 67.2 bits (165), Expect = 1e-12
 Identities = 62/266 (23%), Positives = 101/266 (37%), Gaps = 33/266 (12%)

Query: 48  GICHSDLHMIKNEWGNTIYP-----IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102
           G+C +D  ++  E+G    P     +V GHE +GVV EVG   S    GD V V  +   
Sbjct: 36  GVCGTDREIVAGEYGT--APPGEDFLVLGHEALGVVEEVG-DGSGLSPGDLV-VPTVRRP 91

Query: 103 CRSCDSCAIDLENYCPKVIMTYANKYHD-GTITYGGY-SDIMVADEHFVVRIPEG----- 155
              C +C I   ++C         +Y + G     G+  +  V D  ++V++P       
Sbjct: 92  PGKCLNCRIGRPDFCET------GEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLADVG 145

Query: 156 ---TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTV 212
               PL      +     V   L  +   +      V+G G +G +A    +  G +V V
Sbjct: 146 VLLEPLSVVEKAIEQAEAVQKRLPTWNPRR----ALVLGAGPIGLLAALLLRLRGFEVYV 201

Query: 213 ISTS--PSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKS 270
           ++    P  K++ +E LGA     S+        +G  D II+           +  L  
Sbjct: 202 LNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGVPPLAFEALPALAP 261

Query: 271 QGKLVLVGAPEK--PLELPAFSLLMG 294
            G ++L G P      E+    L   
Sbjct: 262 NGVVILFGVPGGGREFEVDGGELNRD 287

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score = 66.9 bits (164), Expect = 1e-12
 Identities = 70/310 (22%), Positives = 112/310 (36%), Gaps = 56/310 (18%)

Query: 11  KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVP 70
               GW  K                G  D   + T    C SD+H +        + ++ 
Sbjct: 9   IGKVGWIEKP-----------IPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMIL 57

Query: 71  GHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD 130
           GHE VGVV EVGS+V  FK GD+V V   +       +     +   P            
Sbjct: 58  GHEAVGVVEEVGSEVKDFKPGDRVIVPA-ITPDWRSVAA----QRGYPS---------QS 103

Query: 131 GTITYGGY--SDIM--VADEHFVV--------RIPEGTPLDATAPLLCAGITVYSPLRFY 178
           G +  GG+  S+    V  E+F V         +P+G   D  A +L   ++      F+
Sbjct: 104 GGML-GGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLT-DEQAVMLPDMMST----GFH 157

Query: 179 GLD----KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV 234
           G +    K G  V V G+G +G +AV  A+  G    +   S   + E  +  GA   + 
Sbjct: 158 GAELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVD 217

Query: 235 SRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELP-- 287
            ++ D ++  +    G     +I            + +LK  G +  V    +   LP  
Sbjct: 218 YKNGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIP 277

Query: 288 --AFSLLMGE 295
              + + MG 
Sbjct: 278 REEWGVGMGH 287

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score = 66.9 bits (164), Expect = 2e-12
 Identities = 69/281 (24%), Positives = 106/281 (37%), Gaps = 50/281 (17%)

Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVP----GHEIVGVVTEVGSKVSKFKVGDKV 94
           D   +V    +C SDL          + P       GHE VGVV EVGS+V+  K GD V
Sbjct: 27  DAVIRVVATCVCGSDLW-----PYRGVSPTRAPAPIGHEFVGVVEEVGSEVTSVKPGDFV 81

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
            +     S  +C  C       C      +   + DG    G Y  + +AD   +V++P 
Sbjct: 82  -IAPFAISDGTCPFCRAGFTTSCVHG--GFWGAFVDG--GQGEYVRVPLAD-GTLVKVPG 135

Query: 155 GTPLDA--TAPLL--------------CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHV 198
               D      LL               AG+            +PG  V VVG G +G  
Sbjct: 136 SPSDDEDLLPSLLALSDVMGTGHHAAVSAGV------------RPGSTVVVVGDGAVGLC 183

Query: 199 AVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI-----I 252
           AV  AK +G + +  +S    +++ A E  GA   +  R ++ +        G+     +
Sbjct: 184 AVLAAKRLGAERIIAMSRHEDRQALARE-FGATDIVAERGEEAVARVRELTGGVGADAVL 242

Query: 253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLM 293
           + V     +   I + +  G++  VG P   +EL    L  
Sbjct: 243 ECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFF 283

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 65.9 bits (161), Expect = 3e-12
 Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 20/260 (7%)

Query: 34  ATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
           A GE  V  KV   GIC SD H+ +       YP V GHE  GV+  VG  V   ++G++
Sbjct: 23  AAGE--VRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGER 80

Query: 94  VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP 153
           V V  ++ SC  C  C+I   N C  +++        G    GG+S+  V       RIP
Sbjct: 81  VAVDPVI-SCGHCYPCSIGKPNVCTSLVVL-------GVHRDGGFSEYAVVPAKNAHRIP 132

Query: 154 EGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTV 212
           +    D  A ++    T+ + +             + G G +G   V+  K +  VK  +
Sbjct: 133 DAIA-DQYAVMV-EPFTIAANVTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVI 190

Query: 213 ISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTV---SAVHP--LMPLIGL 267
           ++    ++    +  GAD ++++  Q+ +  A+    GI  T+   +A HP  L   + L
Sbjct: 191 VADRIDERLALAKESGAD-WVINNAQEPLGEAL-EEKGIKPTLIIDAACHPSILEEAVTL 248

Query: 268 LKSQGKLVLVGAPEKPLELP 287
                ++VL+G   +P E+ 
Sbjct: 249 ASPAARIVLMGFSSEPSEIV 268

Length = 339

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 65.2 bits (159), Expect = 3e-12
 Identities = 63/237 (26%), Positives = 83/237 (35%), Gaps = 28/237 (11%)

Query: 69  VPGHEIVGVVTEVGSKVSKFKVGDKVGVG-----CMVGSCRSCDSCAIDLENYCPKVIMT 123
           V GHEIVG V  +    +    G  + +G      +   C  C  C   L   C  +   
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY 60

Query: 124 YANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPL--------DAT-APLLCAGITVYSP 174
                  G    GGY+      EH    +P GT +        DA  AP  CA  TV + 
Sbjct: 61  GHEALDSGWPLSGGYA------EHCH--LPAGTAIVPVPDDLPDAVAAPAGCATATVMAA 112

Query: 175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV 234
           L   G D  G  V VVG G LG  A   A A G    V +     + E     GA +   
Sbjct: 113 LEAAG-DLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAE 171

Query: 235 SRDQDEMQAAM---GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVG--APEKPLEL 286
                E Q  +     +D  ++   A   +   +  L   G  VL G   P  P+ L
Sbjct: 172 PEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVAL 228

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 65.4 bits (160), Expect = 4e-12
 Identities = 58/200 (29%), Positives = 78/200 (39%), Gaps = 47/200 (23%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVP---GHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  K    GI  SD++     +   + P  P   G E VG V  VG  V+ FKVGD
Sbjct: 29  GPGEVLVKNRFVGINASDINFTAGRYDPGVKP--PFDCGFEGVGEVVAVGEGVTDFKVGD 86

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
            V                                     T+++G +++  V      V +
Sbjct: 87  AVA------------------------------------TMSFGAFAEYQVVPARHAVPV 110

Query: 153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV-GLGGLGHVAVKFAKAMGVKVT 211
           PE  P     PLL +G+T    L   G  K G  V V    GG G  AV+ AK  G    
Sbjct: 111 PELKP--EVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAG--CH 166

Query: 212 VIST-SPSKKSEAIERLGAD 230
           VI T S  +K+E ++ LG D
Sbjct: 167 VIGTCSSDEKAEFLKSLGCD 186

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score = 65.2 bits (159), Expect = 6e-12
 Identities = 65/225 (28%), Positives = 94/225 (41%), Gaps = 29/225 (12%)

Query: 39  DVTFKVTHCGICHSDLHMIKNE-WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
           +V  K+ +  ICH+DL   K E      YP + GHE  G+V  VG  V   K GD V + 
Sbjct: 37  EVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEDLKAGDHV-IP 95

Query: 98  CMVGSCRSCDSCAIDLENYCP-------KVIMTYANK------------YHD-GTITYGG 137
              G C  C  C  D  N C        K +M    K            YH   T T+  
Sbjct: 96  IFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTE 155

Query: 138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD-KPGMHVGVVGLGGLG 196
           Y+   V D   VV+I    PL   + L C G++      +   + + G  V + GLG +G
Sbjct: 156 YT---VLDSACVVKIDPNAPLKKMSLLSC-GVSTGVGAAWNTANVQAGSSVAIFGLGAVG 211

Query: 197 HVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
               + A+A G  K+  +  +P K  +  E +G   F+  +D D+
Sbjct: 212 LAVAEGARARGASKIIGVDINPEKFEKGKE-MGITDFINPKDSDK 255

Length = 381

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 8e-12
 Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 45/183 (24%)

Query: 66  YPIVPGH------EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPK 119
           YP  PG       E+ G V +VGS V +FK GD+V +  + G                  
Sbjct: 52  YPPPPGSSEILGLEVAGYVEDVGSDVKRFKEGDRV-MALLPG------------------ 92

Query: 120 VIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYG 179
                           GGY++  VA +  V+ IP+G   +  A +  A +T +  L+ +G
Sbjct: 93  ----------------GGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHG 136

Query: 180 LDKPGMHVGV-VGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ 238
             K G  V +  G  G+G  A + A+  G   T+I+TS  +K +  ++L A   ++ R  
Sbjct: 137 DVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAA--IILIRYP 193

Query: 239 DEM 241
           DE 
Sbjct: 194 DEE 196

Length = 334

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 64.3 bits (157), Expect = 1e-11
 Identities = 71/273 (26%), Positives = 111/273 (40%), Gaps = 30/273 (10%)

Query: 37  EKDVTFKVTHCGICHSDLHMIKN-EWGNTI--YPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
                 ++T  GIC SDLH  +  + GN +   P+V GHE++G +    S  S  K G  
Sbjct: 27  NNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHSDS--SGLKEGQT 84

Query: 94  VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY-----GGYSDIMVADEHF 148
           V +      C  C  C    EN C    M +      G+  Y     GG++   V D   
Sbjct: 85  VAIN-PSKPCGHCKYCLSHNENQC--TTMRFF-----GSAMYFPHVDGGFTRYKVVDTAQ 136

Query: 149 VVRIPEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA 205
            +  PE       A   PL  A    +      G D  G  V V G+G +G + V   K 
Sbjct: 137 CIPYPEKADEKVMAFAEPLAVAIHAAHQA----G-DLQGKRVFVSGVGPIGCLIVAAVKT 191

Query: 206 MGVKVTVISTSPSKKSEAIER-LGADSFL--VSRDQDEMQAAMGTMDGIIDTVSAVHPLM 262
           +G    ++    S +S ++ R +GAD  +   + D D  +A  G  D   +       + 
Sbjct: 192 LGAA-EIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGYFDVSFEVSGHPSSIN 250

Query: 263 PLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGE 295
             + + +++G +V VG    P E P  +L++ E
Sbjct: 251 TCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKE 283

Length = 343

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 63.7 bits (156), Expect = 2e-11
 Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 53/238 (22%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P + G +  GVV  VGS+V+ FKVGD+V                                
Sbjct: 60  PKILGWDASGVVEAVGSEVTLFKVGDEV-------------------------------- 87

Query: 127 KYHDGTITY-GGYSDIMVADEHFVVRIPEG-TPLDATA-PLLCAGITVYSPL--RFYGLD 181
            Y+ G IT  G  ++  + DE  V   P+  +  +A A PL    +T +  L  R  G+ 
Sbjct: 88  -YYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPL--TSLTAWEALFDRL-GIS 143

Query: 182 KPGMHVG-----VVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA-IERLGADSFLVS 235
           +   + G     + G GG+G +A++ AK +   +TVI+T+   +S A ++ LGAD  +++
Sbjct: 144 EDAENEGKTLLIIGGAGGVGSIAIQLAKQLT-GLTVIATASRPESIAWVKELGAD-HVIN 201

Query: 236 RDQD---EMQA-AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAF 289
             QD   +++A  +  +D I            +  L+  QG + L+  P++PL+L   
Sbjct: 202 HHQDLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQEPLDLGPL 259

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 62.4 bits (152), Expect = 3e-11
 Identities = 43/165 (26%), Positives = 64/165 (38%), Gaps = 38/165 (23%)

Query: 66  YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
           YP  PG E  GVV  VG  V++  VGD+V      G                        
Sbjct: 37  YPFTPGFEASGVVRAVGPHVTRLAVGDEVIA--GTGE----------------------- 71

Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGM 185
                   + GG++ ++   E  VVR P     +    L    +TV       GL   G 
Sbjct: 72  --------SMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGL-AKGE 122

Query: 186 HVGV-VGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLG 228
           H+ +    GG G +AV+ A+  G    + +T+ S  K E +++LG
Sbjct: 123 HILIQTATGGTGLMAVQLARLKG--AEIYATASSDDKLEYLKQLG 165

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 62.0 bits (151), Expect = 6e-11
 Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 46/210 (21%)

Query: 37  EKDVTFKVTHCGICHSDLHMIKNEWGNTI---YPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
           E DV  +V +  + + D   + +  G  I   YP +PG ++ G V E  S   +FK GD+
Sbjct: 27  EGDVLIRVAYSSVNYKD--GLASIPGGKIVKRYPFIPGIDLAGTVVE--SNDPRFKPGDE 82

Query: 94  VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP 153
           V                          I+T    Y  G   +GGYS+       +VV +P
Sbjct: 83  V--------------------------IVT---SYDLGVSHHGGYSEYARVPAEWVVPLP 113

Query: 154 EG-TPLDA----TAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMG 207
           +G T  +A    TA    A ++++  L   GL      V V G  GG+G +AV     +G
Sbjct: 114 KGLTLKEAMILGTAG-FTAALSIHR-LEENGLTPEQGPVLVTGATGGVGSLAVSILAKLG 171

Query: 208 VKVTVISTSPSKKSEAIERLGADSFLVSRD 237
            +V V ST  +  ++ +++LGA   ++ R+
Sbjct: 172 YEV-VASTGKADAADYLKKLGAKE-VIPRE 199

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 60.0 bits (146), Expect = 3e-10
 Identities = 66/228 (28%), Positives = 98/228 (42%), Gaps = 33/228 (14%)

Query: 61  WGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPK 119
           WG T+ +P + G +IVG V  VG  V   ++G++V V          D    D     P 
Sbjct: 71  WGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVLV----------DPSIRDPPEDDPA 120

Query: 120 VIMTYANKYHDGTITYGGYSDIMV--ADEHFVVRIPEGTPLD--ATAPLLCAGITVYSPL 175
            I    ++        GG+++  V  A+  + V     +PL     A   C+  T  + L
Sbjct: 121 DIDYIGSERD------GGFAEYTVVPAENAYPVN----SPLSDVELATFPCSYSTAENML 170

Query: 176 RFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV 234
              G+   G  V V G  GG+G   V+ AK  G  V  +    + K EA+  LGAD+  +
Sbjct: 171 ERAGV-GAGETVLVTGASGGVGSALVQLAKRRGAIVIAV-AGAA-KEEAVRALGADTV-I 226

Query: 235 SRDQDEMQAAMGTMDGIIDTVSAV--HPLMP-LIGLLKSQGKLVLVGA 279
            RD   +  A       +D V+ V   PL P L+ LL+  G+ V  GA
Sbjct: 227 LRDAPLLADAKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGA 274

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 58.4 bits (142), Expect = 1e-09
 Identities = 56/217 (25%), Positives = 87/217 (40%), Gaps = 44/217 (20%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P+  G +  GVV ++GS V  F++GD+V                                
Sbjct: 74  PLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPP-------------------------- 107

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
            +  GT     +++ +V  E+ V + P+    +  A L  AG+T +S L   G   P   
Sbjct: 108 -WSQGT-----HAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNA 161

Query: 187 VG--VV---GLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241
            G  V+   G GG+G  A++  KA G  VT   T  +     ++ LGAD  +   ++D  
Sbjct: 162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTT--TCSTDAIPLVKSLGADDVIDYNNEDFE 219

Query: 242 QA--AMGTMDGIIDTV-SAVHPLMPLIGLLKSQGKLV 275
           +     G  D I+DTV          + LLK  G  V
Sbjct: 220 EELTERGKFDVILDTVGGDTEKWA--LKLLKKGGTYV 254

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 57.8 bits (140), Expect = 2e-09
 Identities = 60/225 (26%), Positives = 91/225 (40%), Gaps = 56/225 (24%)

Query: 36  GEKDVTFKVTHCGICHSDL---HMIKNEWGNTIY------PIVPGHEIVGVVTEVGSKVS 86
           G  ++  KV  CGIC  D+   H   + WG+         P++PGHE VG V E+G    
Sbjct: 23  GPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEGAE 82

Query: 87  K--FKVGDKVG----VGCMVGSCRSCDSCAIDLENY--CPKVIMTYANKYHDGTITYGGY 138
           +   KVGD+V     V C   +CR C+        Y  C K      + Y       GG 
Sbjct: 83  ERGVKVGDRVISEQIVPC--WNCRFCNR-----GQYWMCQK-----HDLYGFQNNVNGGM 130

Query: 139 SDIMV-ADEHFVVRIPEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHV------- 187
           ++ M    E  V ++P+  P +      PL CA          + +D+  +         
Sbjct: 131 AEYMRFPKEAIVHKVPDDIPPEDAILIEPLACA---------LHAVDRANIKFDDVVVLA 181

Query: 188 --GVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD 230
             G +GLG +G   +K  K    K+ V+     + + A  + GAD
Sbjct: 182 GAGPLGLGMIGAARLKNPK----KLIVLDLKDERLALA-RKFGAD 221

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 56.8 bits (138), Expect = 3e-09
 Identities = 50/214 (23%), Positives = 81/214 (37%), Gaps = 37/214 (17%)

Query: 48  GICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCD 107
           G+  S++   +    +  +P V G E VG V E       F  G +V    M G  R+ D
Sbjct: 38  GLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTPGQRV-ATAMGGMGRTFD 94

Query: 108 SCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167
                                       G Y++  +     V  I         A L   
Sbjct: 95  ----------------------------GSYAEYTLVPNEQVYAIDSDLSWAELAALPET 126

Query: 168 GITVYSPLRFYGLD-KPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE 225
             T +  L F  L  +PG  + + G    +G  A+K AKA+G  VT  + SP +    ++
Sbjct: 127 YYTAWGSL-FRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERA-ALLK 184

Query: 226 RLGADSFLVSR--DQDEMQAAMGTMDGIIDTVSA 257
            LGAD  ++      ++++AA G  D +++ V  
Sbjct: 185 ELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGT 218

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 56.1 bits (136), Expect = 6e-09
 Identities = 49/218 (22%), Positives = 71/218 (32%), Gaps = 61/218 (27%)

Query: 34  ATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI----------VPGHEIVGVVTEVGS 83
                +V  K+    I  +D++ I       +YPI          V G+E VG V +VGS
Sbjct: 26  PGPPNEVLVKMLAAPINPADINQI-----QGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80

Query: 84  KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT-ITYGGYSDIM 142
            V   K GD V                          I         GT  T+       
Sbjct: 81  GVKSLKPGDWV--------------------------IPLRPGL---GTWRTHA------ 105

Query: 143 VADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV----GLGGLGHV 198
           V     ++++P     +  A L     T Y  L  +   +PG     V        +G  
Sbjct: 106 VVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPG---DWVIQNGANSAVGQA 162

Query: 199 AVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSFL 233
            ++ AK +G+K   +        E  ERL   GAD  L
Sbjct: 163 VIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVL 200

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 55.6 bits (135), Expect = 7e-09
 Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 45/200 (22%)

Query: 66  YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV-GCMVGSCRSCDSCAIDLENYCPKVIMTY 124
           YP  PG +  G V  V S   +F+ GD+V V G  +G                    M  
Sbjct: 57  YPHTPGIDAAGTV--VSSDDPRFREGDEVLVTGYDLG--------------------MNT 94

Query: 125 ANKYHDGTITYGGYSDIMVADEHFVVRIPEG-TPLDATA---PLLCAGITVYSPLRFYGL 180
                      GG+++ +     +VV +PEG +  +A         A ++V+  L   G 
Sbjct: 95  D----------GGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVH-RLEDNGQ 143

Query: 181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-- 237
                 V V G  GG+G +AV     +G  V  ++     +++ ++ LGA S ++ R+  
Sbjct: 144 TPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEE-QADYLKSLGA-SEVLDREDL 201

Query: 238 QDEMQAAM--GTMDGIIDTV 255
            DE +  +      G IDTV
Sbjct: 202 LDESKKPLLKARWAGAIDTV 221

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 54.8 bits (132), Expect = 2e-08
 Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 25/181 (13%)

Query: 69  VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY 128
           + G +  GVV  VG  V+++KVGD+V     V SC   D  A D  +  P   M  + + 
Sbjct: 80  IIGSDASGVVWRVGPGVTRWKVGDEV-----VASCLQVDLTAPDGRDGDP---MLSSEQR 131

Query: 129 HDGTIT-YGGYSDIMVADEHFVVRIPEG-TPLDATAPLLCAGITVY------SPLRFYGL 180
             G  T +G +++  +  ++ ++  P+  T  +A  P L    T Y      +P      
Sbjct: 132 IWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGA-TAYRQLVGWNPAAV--- 187

Query: 181 DKPGMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQ 238
            KPG +V + G  GGLG  A + A+A G   V V+S SP +K+E    LGA++ +   D 
Sbjct: 188 -KPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVS-SP-EKAEYCRSLGAEAVIDRNDF 244

Query: 239 D 239
            
Sbjct: 245 G 245

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|130269 TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

 Score = 54.1 bits (130), Expect = 2e-08
 Identities = 66/243 (27%), Positives = 89/243 (36%), Gaps = 72/243 (29%)

Query: 65  IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY 124
            YP+VPG+E VG V E G     F+ GD+V                     + P      
Sbjct: 57  GYPLVPGYESVGRVVEAGPDTG-FRPGDRV---------------------FVPG----- 89

Query: 125 ANKYHDGTITYGGYSDIMVADEHFVVRI-----PEGT--PLDATAPLLCAGITVYSPLRF 177
           +N Y D    +GG S  +V     V R+     P+G    L ATA    AG  V      
Sbjct: 90  SNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQGALLALAATARHAVAGAEVKVL--- 146

Query: 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLV-- 234
                      +VG G LG +  +  KA G     V  T+P +      R GA  + V  
Sbjct: 147 --------PDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRR------RDGATGYEVLD 192

Query: 235 -----SRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLEL--- 286
                 RD   +  A G    +IDT         L+  L   G++VL G   +P+     
Sbjct: 193 PEKDPRRDYRAIYDASGDP-SLIDT---------LVRRLAKGGEIVLAGFYTEPVNFDFV 242

Query: 287 PAF 289
           PAF
Sbjct: 243 PAF 245

[Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 308

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score = 53.4 bits (128), Expect = 5e-08
 Identities = 55/221 (24%), Positives = 88/221 (39%), Gaps = 28/221 (12%)

Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNT-IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
           ++  KV    +C SDL    + W +  ++P + GHE  G+V  +G  V++F+ GD V + 
Sbjct: 39  EIRIKVVSTSLCRSDL----SAWESQALFPRIFGHEASGIVESIGEGVTEFEKGDHV-LT 93

Query: 98  CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD---------GTITY-----GGYSDIMV 143
              G C SC  C     N C  + +      H          G   Y       +S+  V
Sbjct: 94  VFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTV 153

Query: 144 ADEHFVVRIPEGTPLDATAPLLC---AGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAV 200
                 V++    PL     L C   AG+   +      + K G  V + GLG +G    
Sbjct: 154 VHSGCAVKVDPLAPLHKICLLSCGVAAGLG--AAWNVADVSK-GSSVVIFGLGTVGLSVA 210

Query: 201 KFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
           + AK  G  ++  +  +P K  +A +  G   F+   D  E
Sbjct: 211 QGAKLRGASQIIGVDINPEKAEKA-KTFGVTDFINPNDLSE 250

Length = 378

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 53.7 bits (129), Expect = 5e-08
 Identities = 32/83 (38%), Positives = 38/83 (45%), Gaps = 7/83 (8%)

Query: 28  FHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP--IVPGHEIVGVVTEVGSKV 85
                    E  V  KV    IC SD HM++   G T  P  +V GHEI G V E G  V
Sbjct: 24  LELPDGRKCEHGVILKVVTTNICGSDQHMVR---GRTTAPTGLVLGHEITGEVIEKGRDV 80

Query: 86  SKFKVGDKVGVGCMV--GSCRSC 106
              K+GD V V   +  G CR+C
Sbjct: 81  EFIKIGDIVSVPFNIACGRCRNC 103

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 47/165 (28%), Positives = 64/165 (38%), Gaps = 36/165 (21%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P VPG E+ GVV  VG  V    +G +V                                
Sbjct: 60  PYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTGRAG------------------------ 95

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
                    GGY+++ VAD   +  +P+G  L+A   ++  G T    L    L  PG  
Sbjct: 96  ---------GGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGLLDLATL-TPGDV 145

Query: 187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD 230
           V V    GGLG + V+ AKA G  V   +  P  K+  +  LGAD
Sbjct: 146 VLVTAAAGGLGSLLVQLAKAAGATVVGAAGGP-AKTALVRALGAD 189

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score = 50.5 bits (121), Expect = 4e-07
 Identities = 56/245 (22%), Positives = 96/245 (39%), Gaps = 59/245 (24%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P + G +  GVV  VG +V+ FK GD+V                                
Sbjct: 59  PKILGWDAAGVVVAVGDEVTLFKPGDEV-------------------------------- 86

Query: 127 KYHDGTITY-GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPL--RFYGLDKP 183
            ++ G I   G  ++  + DE  V   P+       A L    IT +  L  R  G++ P
Sbjct: 87  -WYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRL-GINDP 144

Query: 184 GMHVG-----VVGLGGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSFLVSRD 237
                     + G GG+G + ++ A+ +   +TVI+T S  +  E +  LGA   ++   
Sbjct: 145 VAGDKRALLIIGGAGGVGSILIQLARQL-TGLTVIATASRPESQEWVLELGAH-HVIDHS 202

Query: 238 QDEMQAAMGTMDGIIDTVSAVHPLM-------PLIGLLKSQGKLVLVGAPE----KPLEL 286
           +  ++A +  +   ++ VS V  L         ++ LL  QG+  L+  P      P + 
Sbjct: 203 KP-LKAQLEKLG--LEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDPAELDISPFKR 259

Query: 287 PAFSL 291
            + SL
Sbjct: 260 KSISL 264

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score = 50.0 bits (120), Expect = 6e-07
 Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 16/179 (8%)

Query: 130 DGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG---ITVYSPLRFYGLDKPGMH 186
           D  +   G+ +  ++D   + ++   +P   +A L   G   +T Y  L   G  K G  
Sbjct: 95  DIVVGVSGWQEYAISDGEGLRKLDP-SPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGET 153

Query: 187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD--EM-- 241
           V V    G +G V  + AK  G +V  I+    K     E LG D+ +  + +D  +   
Sbjct: 154 VVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALK 213

Query: 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA------PEKPLELPAFSLLMG 294
           +A    +D   + V     L  ++ LL    ++ + GA      PE P       LLM 
Sbjct: 214 EACPKGIDVYFENVGGEV-LDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMA 271

Length = 340

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 49.7 bits (119), Expect = 7e-07
 Identities = 54/212 (25%), Positives = 80/212 (37%), Gaps = 44/212 (20%)

Query: 23  GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVG 82
            VL    F+     E +V  +    GI + D ++    +     P   G E  GVV++VG
Sbjct: 14  EVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVG 73

Query: 83  SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIM 142
           S V   KVGD+V                             YA          G YS + 
Sbjct: 74  SGVKHIKVGDRV----------------------------VYAQS------ALGAYSSVH 99

Query: 143 VADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG----MHVGVVGLGGLGHV 198
                    +P+    +  A     G+TVY  LR     KP      H      GG+G +
Sbjct: 100 NVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAA---GGVGLI 156

Query: 199 AVKFAKAMGVKVTVISTSPS-KKSEAIERLGA 229
           A ++AKA+G K  +I T  S +K++  ++ GA
Sbjct: 157 ACQWAKALGAK--LIGTVGSAQKAQRAKKAGA 186

Length = 327

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 49.3 bits (118), Expect = 1e-06
 Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 15/174 (8%)

Query: 71  GHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCP-KVIMTYANKYH 129
           G +  G+V  VG  V  +KVGD+V V C V      +    D   + P + I  Y     
Sbjct: 86  GSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGD-PMFDPSQRIWGYET--- 141

Query: 130 DGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD--KPGMHV 187
                YG ++   +     ++  P+    +  A  +  G T Y  L  +  +  KPG +V
Sbjct: 142 ----NYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNV 197

Query: 188 GVVG-LGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQD 239
            + G  GGLG +A++ A+A G   V V+S S   K+E    LGA+  +  RD D
Sbjct: 198 LIWGASGGLGSMAIQLARAAGANPVAVVS-SEE-KAEYCRALGAEGVINRRDFD 249

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 61/230 (26%), Positives = 95/230 (41%), Gaps = 47/230 (20%)

Query: 37  EKDVTFKVTHCGICHSDLHMIKNEWGNT-IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           E DV  KV +  + + D   I  + G    YP++PG +  G V  V S+  +F+ GD+V 
Sbjct: 26  EGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTV--VSSEDPRFREGDEV- 82

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
                                           Y  G    GGYS        ++V +PEG
Sbjct: 83  ----------------------------IVTGYGLGVSHDGGYSQYARVPADWLVPLPEG 114

Query: 156 -TPLDATAPLLCAGITVYSPLRFYGLDKPGMH-----VGVVGL-GGLGHVAVKFAKAMGV 208
            +  +A A L  AG T  + L    L++ G+      V V G  GG+G +AV     +G 
Sbjct: 115 LSLREAMA-LGTAGFT--AALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY 171

Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA---AMGTMDGIIDTV 255
           +V V ST  +++ + ++ LGA S ++ R+               G +DTV
Sbjct: 172 EV-VASTGKAEEEDYLKELGA-SEVIDREDLSPPGKPLEKERWAGAVDTV 219

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases

 Score = 46.8 bits (112), Expect = 6e-06
 Identities = 50/201 (24%), Positives = 80/201 (39%), Gaps = 48/201 (23%)

Query: 66  YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
           +P+VPG ++ G V E  S   +FK GD+V                               
Sbjct: 57  FPLVPGIDLAGTVVE--SSSPRFKPGDRV-----------------------------VL 85

Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEG-TPLDATAPLLCAGIT----VYSPLRFYGL 180
             +  G   +GGY+        ++V +PEG +   A A +  AG T    V + L  +G+
Sbjct: 86  TGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMA-IGTAGFTAMLCVMA-LEDHGV 143

Query: 181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD 239
                 V V G  GG+G VAV     +G +V   +  P  +++ +  LGA   +   D+ 
Sbjct: 144 TPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPE-EADYLRSLGASEII---DRA 199

Query: 240 EMQAAMGTMD-----GIIDTV 255
           E+      +      G +DTV
Sbjct: 200 ELSEPGRPLQKERWAGAVDTV 220

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324

>gnl|CDD|240625 cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase

 Score = 44.8 bits (107), Expect = 2e-05
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 10/70 (14%)

Query: 184 GMHVGVVGLGGLG-HVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ 242
           G  V +VGLG +G  +A + AKA G++V  +  S       ++ +           DE+ 
Sbjct: 134 GKTVLIVGLGDIGREIA-RRAKAFGMRVIGVRRSGRPAPPVVDEV--------YTPDELD 184

Query: 243 AAMGTMDGII 252
             +   D ++
Sbjct: 185 ELLPEADYVV 194

2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomains but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of the hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. FDHs are found in all methylotrophic microorganisms in energy production and in the stress responses of plants. Length = 313

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 50/217 (23%), Positives = 82/217 (37%), Gaps = 53/217 (24%)

Query: 69  VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY 128
           VPG +  GVV    +  S   VG +V VG                               
Sbjct: 54  VPGWDAAGVVERAAADGSGPAVGARV-VGLGAM--------------------------- 85

Query: 129 HDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVG 188
                  G +++++     ++  +P+G      A L  AG+T         L + G  +G
Sbjct: 86  -------GAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTAL-----RALRRGGPLLG 133

Query: 189 ----VVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA 243
               V G  GG+G  AV+ A   G  V  +  SP  ++E +  LGA   +V       + 
Sbjct: 134 RRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSP-ARAEGLRELGAAEVVVGGS----EL 188

Query: 244 AMGTMDGIIDTVSAVHPLM-PLIGLLKSQGKLVLVGA 279
           +   +D ++D+V    P +   + LL   G +V VG+
Sbjct: 189 SGAPVDLVVDSVGG--PQLARALELLAPGGTVVSVGS 223

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|217244 pfam02826, 2-Hacid_dh_C, D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

 Score = 43.6 bits (104), Expect = 3e-05
 Identities = 17/53 (32%), Positives = 27/53 (50%)

Query: 172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI 224
           + P    G +  G  VG++GLG +G    +  KA G+KV      P  ++EA+
Sbjct: 23  WRPDALLGRELSGKTVGIIGLGRIGRAVARRLKAFGMKVIAYDRYPKAEAEAL 75

This domain is inserted into the catalytic domain, the large dehydrogenase and D-lactate dehydrogenase families in SCOP. N-terminal portion of which is represented by family pfam00389. Length = 175

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 44.2 bits (105), Expect = 5e-05
 Identities = 60/249 (24%), Positives = 94/249 (37%), Gaps = 63/249 (25%)

Query: 32  RRATGEKDVTFKVTHCGICHSDLHMIKNE--WGNTIYPIVPGHEIVGVVTEVGSKV-SKF 88
                + ++  KV    +   DL  + N   +   +     G +  GV+ +VGS V S++
Sbjct: 23  PNCYKDNEIVVKVHAAALNPVDL-KLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW 81

Query: 89  KVGDKV-----GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMV 143
           KVGD+V           G+        +D     PK                        
Sbjct: 82  KVGDEVCGIYPHPYGGQGTL--SQYLLVD-----PKK----------------------- 111

Query: 144 ADEHFVVRIPEGTPLD-ATAPLLCAGITVYSPLRFYGLDKPGMHVG----VVGLGG---L 195
            D+  + R PE   L+ A A  L  G T Y       L+  G  +G    V+ LGG   +
Sbjct: 112 -DKKSITRKPENISLEEAAAWPLVLG-TAYQ-----ILEDLGQKLGPDSKVLVLGGSTSV 164

Query: 196 GHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-------VSRDQDEMQAAMGT- 247
           G  A++ AK      TV+ T  S+ +E  ++LGAD F+       V   +  ++   G  
Sbjct: 165 GRFAIQLAKNHYNIGTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQG 224

Query: 248 -MDGIIDTV 255
             D I+D V
Sbjct: 225 KFDLILDCV 233

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|183914 PRK13243, PRK13243, glyoxylate reductase; Reviewed

 Score = 41.3 bits (97), Expect = 3e-04
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)

Query: 170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA 229
             + PL F G D  G  +G++G G +G    + AK  G++  ++  S ++K EA + LGA
Sbjct: 136 VAWHPLMFLGYDVYGKTIGIIGFGRIGQAVARRAKGFGMR--ILYYSRTRKPEAEKELGA 193

Query: 230 D 230
           +
Sbjct: 194 E 194

Length = 333

>gnl|CDD|240622 cd05198, formate_dh_like, Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxy acid dehydrogenase family

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD 230
              F G +  G  VG+VGLG +G    K  +A G+K  V+    ++K E  E LG  
Sbjct: 130 WAGFPGYELEGKTVGIVGLGRIGQRVAKRLQAFGMK--VLYYDRTRKPEPEEDLGFR 184

Formate dehydrogenase, D-specific 2-hydroxy acid dehydrogenase, Phosphoglycerate Dehydrogenase, Lactate dehydrogenase, Thermostable Phosphite Dehydrogenase, and Hydroxy(phenyl)pyruvate reductase, among others, share a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. 2-hydroxyacid dehydrogenases are enzymes that catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. FDHs are found in all methylotrophic microorganisms in energy production and in the stress responses of plants. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-Adenosylhomocysteine Hydrolase, among others. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Length = 302

>gnl|CDD|240655 cd12178, 2-Hacid_dh_13, Putative D-isomer specific 2-hydroxyacid dehydrogenases, NAD-binding and catalytic domains

 Score = 40.7 bits (96), Expect = 6e-04
 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)

Query: 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER-LGAD 230
           +PL F G +  G  +G++G+G +G    + AKA G+K  ++  +  + SE  E+ LGA 
Sbjct: 133 APLFFLGHELAGKTLGIIGMGRIGQAVARRAKAFGMK--ILYYNRHRLSEETEKELGAT 189

2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Length = 317

>gnl|CDD|223189 COG0111, SerA, Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 15/51 (29%), Positives = 24/51 (47%)

Query: 175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE 225
             F G +  G  VG++GLG +G    K  KA G+KV        ++   ++
Sbjct: 133 KAFRGTELAGKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVD 183

Length = 324

>gnl|CDD|236025 PRK07476, eutB, threonine dehydratase; Provisional

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 2/44 (4%)

Query: 203 AKAMGVKVTVISTS--PSKKSEAIERLGADSFLVSRDQDEMQAA 244
           A+A+G++ T+  +   P+ K +AI  LGA+  +V R QD+ QA 
Sbjct: 86  ARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQDDAQAE 129

Length = 322

>gnl|CDD|223980 COG1052, LdhA, Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 33/115 (28%), Positives = 44/115 (38%), Gaps = 22/115 (19%)

Query: 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF 232
            P    G D  G  +G++GLG +G    +  K  G+K  V+    S   EA + LGA   
Sbjct: 135 GPDPLLGFDLRGKTLGIIGLGRIGQAVARRLKGFGMK--VLYYDRSPNPEAEKELGARYV 192

Query: 233 LVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP----LIG-----LLKSQGKLVLVG 278
               D DE+ A         D +S   PL P    LI       +K    LV   
Sbjct: 193 ----DLDELLAES-------DIISLHCPLTPETRHLINAEELAKMKPGAILVNTA 236

Length = 324

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	314
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	99.98
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	99.98
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	99.98
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	99.98
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	99.98
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	99.98
PTZ00354	334	alcohol dehydrogenase; Provisional	99.98
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	99.98
cd08252	336	AL_MDR Arginate lyase and other MDR family members	99.97
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	99.97
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	99.97
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	99.97
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	99.97
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	99.97
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	99.97
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.97
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.97
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	99.97
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.96
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.96
COG2130	340	Putative NADP-dependent oxidoreductases [General f	99.96
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.96
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.96
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.96
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.95
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.95
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.95
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.95
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.95
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.94
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.93
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.9
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.9
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.87
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.85
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.54
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.2
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.09
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.66
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.63
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.56
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.5
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	98.46
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.39
PLN02494	477	adenosylhomocysteinase	98.36
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.22
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	98.18
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	98.13
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.13
PRK08324	681	short chain dehydrogenase; Validated	98.09
PTZ00075	476	Adenosylhomocysteinase; Provisional	98.08
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	98.07
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.0
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.79
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.76
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	97.75
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.75
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.73
PLN03209	576	translocon at the inner envelope of chloroplast su	97.73
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	97.69
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.66
PRK12742	237	oxidoreductase; Provisional	97.59
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	97.55
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.53
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.52
PRK05872	296	short chain dehydrogenase; Provisional	97.51
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.51
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.5
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.47
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	97.47
PRK06182	273	short chain dehydrogenase; Validated	97.45
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.43
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.43
PRK08265	261	short chain dehydrogenase; Provisional	97.42
PRK06139	330	short chain dehydrogenase; Provisional	97.41
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.39
PRK06500	249	short chain dehydrogenase; Provisional	97.36
PRK07109	334	short chain dehydrogenase; Provisional	97.34
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.33
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.3
PRK08339	263	short chain dehydrogenase; Provisional	97.28
PRK05693	274	short chain dehydrogenase; Provisional	97.27
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.26
PRK05993	277	short chain dehydrogenase; Provisional	97.25
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.24
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	97.24
PRK07825	273	short chain dehydrogenase; Provisional	97.21
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.21
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.21
PRK12939	250	short chain dehydrogenase; Provisional	97.21
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.19
PRK06484	520	short chain dehydrogenase; Validated	97.18
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.18
PRK06180	277	short chain dehydrogenase; Provisional	97.13
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.13
PRK07576	264	short chain dehydrogenase; Provisional	97.13
PRK07814	263	short chain dehydrogenase; Provisional	97.12
PRK07326	237	short chain dehydrogenase; Provisional	97.11
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	97.11
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.1
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.09
PRK06196	315	oxidoreductase; Provisional	97.09
PRK07060	245	short chain dehydrogenase; Provisional	97.07
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.07
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	97.07
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.05
PRK06484	520	short chain dehydrogenase; Validated	97.02
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.02
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	97.01
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.01
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	97.0
PRK10538	248	malonic semialdehyde reductase; Provisional	96.99
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.99
PRK07832	272	short chain dehydrogenase; Provisional	96.99
PRK07806	248	short chain dehydrogenase; Provisional	96.98
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	96.98
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.96
PRK07062	265	short chain dehydrogenase; Provisional	96.96
PRK07063	260	short chain dehydrogenase; Provisional	96.96
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	96.96
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.96
PRK08263	275	short chain dehydrogenase; Provisional	96.95
PRK08267	260	short chain dehydrogenase; Provisional	96.95
PRK06057	255	short chain dehydrogenase; Provisional	96.95
PRK07523	255	gluconate 5-dehydrogenase; Provisional	96.94
PRK12828	239	short chain dehydrogenase; Provisional	96.93
PRK09291	257	short chain dehydrogenase; Provisional	96.92
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.92
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.9
PRK09242	257	tropinone reductase; Provisional	96.88
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	96.88
PRK09186	256	flagellin modification protein A; Provisional	96.88
PRK12829	264	short chain dehydrogenase; Provisional	96.87
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.87
PLN00203	519	glutamyl-tRNA reductase	96.87
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.86
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.86
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.85
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.85
CHL00194	317	ycf39 Ycf39; Provisional	96.85
PRK05876	275	short chain dehydrogenase; Provisional	96.82
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	96.79
PRK06128	300	oxidoreductase; Provisional	96.79
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.78
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	96.78
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.78
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.78
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.76
PRK08618	325	ornithine cyclodeaminase; Validated	96.76
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.73
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	96.72
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.72
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	96.71
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.71
PRK06197	306	short chain dehydrogenase; Provisional	96.7
PRK08085	254	gluconate 5-dehydrogenase; Provisional	96.7
PRK09072	263	short chain dehydrogenase; Provisional	96.69
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	96.65
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	96.64
PRK05866	293	short chain dehydrogenase; Provisional	96.63
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	96.63
PRK12367	245	short chain dehydrogenase; Provisional	96.63
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.61
PRK07574	385	formate dehydrogenase; Provisional	96.6
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.6
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.59
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.59
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.58
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.57
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	96.56
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.55
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	96.55
PRK05717	255	oxidoreductase; Validated	96.54
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.54
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.53
PRK06101	240	short chain dehydrogenase; Provisional	96.53
PRK06940	275	short chain dehydrogenase; Provisional	96.51
PRK06181	263	short chain dehydrogenase; Provisional	96.5
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.49
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.49
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	96.48
PRK05854	313	short chain dehydrogenase; Provisional	96.47
PRK07831	262	short chain dehydrogenase; Provisional	96.47
PLN03139	386	formate dehydrogenase; Provisional	96.46
PRK06949	258	short chain dehydrogenase; Provisional	96.46
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	96.45
PRK05867	253	short chain dehydrogenase; Provisional	96.44
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.43
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.41
PRK12747	252	short chain dehydrogenase; Provisional	96.4
PRK06194	287	hypothetical protein; Provisional	96.4
PRK07985	294	oxidoreductase; Provisional	96.39
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	96.39
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.39
PLN02928	347	oxidoreductase family protein	96.39
PRK06701	290	short chain dehydrogenase; Provisional	96.38
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.38
PLN02253	280	xanthoxin dehydrogenase	96.37
COG2910	211	Putative NADH-flavin reductase [General function p	96.37
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.37
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	96.37
PRK07791	286	short chain dehydrogenase; Provisional	96.36
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.35
PRK07478	254	short chain dehydrogenase; Provisional	96.35
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	96.35
PRK06124	256	gluconate 5-dehydrogenase; Provisional	96.34
PRK05884	223	short chain dehydrogenase; Provisional	96.33
PRK07453	322	protochlorophyllide oxidoreductase; Validated	96.33
PRK07890	258	short chain dehydrogenase; Provisional	96.33
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	96.33
PRK13243	333	glyoxylate reductase; Reviewed	96.32
PRK13255	218	thiopurine S-methyltransferase; Reviewed	96.32
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.32
PRK06914	280	short chain dehydrogenase; Provisional	96.32
PRK07340	304	ornithine cyclodeaminase; Validated	96.32
PRK05562	223	precorrin-2 dehydrogenase; Provisional	96.31
PRK08219	227	short chain dehydrogenase; Provisional	96.3
PRK07067	257	sorbitol dehydrogenase; Provisional	96.28
PRK07069	251	short chain dehydrogenase; Validated	96.28
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.28
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.28
PRK04457	262	spermidine synthase; Provisional	96.27
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	96.27
PRK12937	245	short chain dehydrogenase; Provisional	96.26
PRK05650	270	short chain dehydrogenase; Provisional	96.26
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	96.25
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	96.24
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	96.23
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	96.23
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	96.22
PRK07024	257	short chain dehydrogenase; Provisional	96.22
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	96.18
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.18
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	96.18
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.18
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.17
smart00846	149	Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase,	96.17
PRK05855	582	short chain dehydrogenase; Validated	96.14
PRK14982	340	acyl-ACP reductase; Provisional	96.14
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	96.13
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	96.13
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	96.12
PRK06483	236	dihydromonapterin reductase; Provisional	96.11
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	96.09
PRK07677	252	short chain dehydrogenase; Provisional	96.09
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.09
PRK08589	272	short chain dehydrogenase; Validated	96.07
PRK06125	259	short chain dehydrogenase; Provisional	96.06
PRK12938	246	acetyacetyl-CoA reductase; Provisional	96.04
PRK12480	330	D-lactate dehydrogenase; Provisional	96.04
PRK12743	256	oxidoreductase; Provisional	96.04
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.03
PRK05875	276	short chain dehydrogenase; Provisional	96.03
PRK07774	250	short chain dehydrogenase; Provisional	96.03
PRK06138	252	short chain dehydrogenase; Provisional	96.03
PRK12746	254	short chain dehydrogenase; Provisional	96.02
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.01
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.01
PRK06436	303	glycerate dehydrogenase; Provisional	96.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	96.0
PRK06398	258	aldose dehydrogenase; Validated	96.0
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.99
PRK07402	196	precorrin-6B methylase; Provisional	95.99
PRK08340	259	glucose-1-dehydrogenase; Provisional	95.99
PRK06179	270	short chain dehydrogenase; Provisional	95.98
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.98
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	95.98
PRK08277	278	D-mannonate oxidoreductase; Provisional	95.98
PRK08643	256	acetoin reductase; Validated	95.97
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	95.97
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	95.96
PRK14967	223	putative methyltransferase; Provisional	95.95
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	95.94
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	95.94
PRK08862	227	short chain dehydrogenase; Provisional	95.92
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	95.91
PRK06172	253	short chain dehydrogenase; Provisional	95.9
PRK07035	252	short chain dehydrogenase; Provisional	95.88
PRK07856	252	short chain dehydrogenase; Provisional	95.88
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	95.87
PRK06720	169	hypothetical protein; Provisional	95.86
PLN02214	342	cinnamoyl-CoA reductase	95.86
PRK08213	259	gluconate 5-dehydrogenase; Provisional	95.86
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	95.85
PRK07074	257	short chain dehydrogenase; Provisional	95.85
PRK08317	241	hypothetical protein; Provisional	95.85
PLN02695	370	GDP-D-mannose-3',5'-epimerase	95.84
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.84
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.84
PRK06482	276	short chain dehydrogenase; Provisional	95.83
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	95.83
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	95.82
PRK07904	253	short chain dehydrogenase; Provisional	95.81
PRK07097	265	gluconate 5-dehydrogenase; Provisional	95.8
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	95.8
COG0569	225	TrkA K+ transport systems, NAD-binding component [	95.8
PLN02780	320	ketoreductase/ oxidoreductase	95.79
PRK08177	225	short chain dehydrogenase; Provisional	95.78
PLN03075	296	nicotianamine synthase; Provisional	95.77
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.76
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.76
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	95.76
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	95.76
PRK07577	234	short chain dehydrogenase; Provisional	95.76
PRK08936	261	glucose-1-dehydrogenase; Provisional	95.73
PRK06841	255	short chain dehydrogenase; Provisional	95.73
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	95.71
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.7
PRK00811	283	spermidine synthase; Provisional	95.7
TIGR00438	188	rrmJ cell division protein FtsJ.	95.69
PLN02896	353	cinnamyl-alcohol dehydrogenase	95.69
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	95.69
PLN02233	261	ubiquinone biosynthesis methyltransferase	95.68
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	95.68
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	95.68
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.67
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.67
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.67
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	95.63
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.62
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.61
PRK07454	241	short chain dehydrogenase; Provisional	95.6
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.6
PRK08017	256	oxidoreductase; Provisional	95.59
PRK06198	260	short chain dehydrogenase; Provisional	95.59
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	95.58
PRK05479	330	ketol-acid reductoisomerase; Provisional	95.58
PLN02366	308	spermidine synthase	95.57
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	95.56
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	95.56
PRK06932	314	glycerate dehydrogenase; Provisional	95.56
PRK13403	335	ketol-acid reductoisomerase; Provisional	95.55
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	95.55
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	95.55
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	95.55
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.53
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	95.53
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.51
PRK08655	437	prephenate dehydrogenase; Provisional	95.5
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.49
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.49
PRK08703	239	short chain dehydrogenase; Provisional	95.48
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.48
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.48
PRK08251	248	short chain dehydrogenase; Provisional	95.48
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	95.47
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	95.45
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	95.44
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	95.44
PRK08291	330	ectoine utilization protein EutC; Validated	95.42
PRK08628	258	short chain dehydrogenase; Provisional	95.41
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.4
KOG0725	270	consensus Reductases with broad range of substrate	95.4
PRK06487	317	glycerate dehydrogenase; Provisional	95.38
PRK07102	243	short chain dehydrogenase; Provisional	95.38
PLN02244	340	tocopherol O-methyltransferase	95.37
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	95.37
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.35
PRK06141	314	ornithine cyclodeaminase; Validated	95.34
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.34
PRK11207	197	tellurite resistance protein TehB; Provisional	95.33
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	95.33
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	95.32
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	95.31
PRK08309	177	short chain dehydrogenase; Provisional	95.31
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	95.29
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	95.29
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	95.28
PRK07775	274	short chain dehydrogenase; Provisional	95.28
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.26
PRK08328	231	hypothetical protein; Provisional	95.26
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	95.24
PRK08303	305	short chain dehydrogenase; Provisional	95.24
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.24
PRK01581	374	speE spermidine synthase; Validated	95.23
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.23
PRK08264	238	short chain dehydrogenase; Validated	95.21
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	95.21
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	95.21
PRK04148	134	hypothetical protein; Provisional	95.18
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	95.17
PRK06114	254	short chain dehydrogenase; Provisional	95.17
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.16
PRK09135	249	pteridine reductase; Provisional	95.14
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.14
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.14
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	95.14
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	95.12
COG0334	411	GdhA Glutamate dehydrogenase/leucine dehydrogenase	95.11
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.11
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	95.11
PRK13303	265	L-aspartate dehydrogenase; Provisional	95.1
PRK08278	273	short chain dehydrogenase; Provisional	95.1
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.08
PRK06924	251	short chain dehydrogenase; Provisional	95.07
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	95.06
PRK04266	226	fibrillarin; Provisional	95.06
PLN02583	297	cinnamoyl-CoA reductase	95.06
PTZ00146	293	fibrillarin; Provisional	95.04
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	95.04
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.04
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.03
PRK03612	521	spermidine synthase; Provisional	95.03
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	95.02
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.02
PRK06953	222	short chain dehydrogenase; Provisional	94.99
PRK07578	199	short chain dehydrogenase; Provisional	94.98

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=1.8e-59  Score=416.28  Aligned_cols=285  Identities=44%  Similarity=0.699  Sum_probs=262.5

Q ss_pred             cccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCC
Q 021300            8 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSK   87 (314)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   87 (314)
                      +.+||+.++...++|  +++.+++.|+|+++||+|||+|+|+|++|++.++|.++...+|+++|||.+|+|+++|++|++
T Consensus         1 ~~~mkA~~~~~~~~p--l~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~   78 (339)
T COG1064           1 MMTMKAAVLKKFGQP--LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTG   78 (339)
T ss_pred             CcceEEEEEccCCCC--ceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCcc
Confidence            357999999987777  888999999999999999999999999999999999999899999999999999999999999


Q ss_pred             CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (314)
Q Consensus        88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~  167 (314)
                      |++||||.+-++..+|++|+||++|++|+|++....       |+..+|+|+||+++++++++++|+++++++||++.|+
T Consensus        79 ~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~-------gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCa  151 (339)
T COG1064          79 LKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT-------GYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCA  151 (339)
T ss_pred             CCCCCEEEecCccCCCCCCccccCcccccCCCcccc-------ceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcC
Confidence            999999999788889999999999999999986543       5678999999999999999999999999999999999


Q ss_pred             hhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCC
Q 021300          168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT  247 (314)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~  247 (314)
                      ..|+|++|++.. ++||++|+|.|.|++|.+++|+|+++|++|+++++++++. ++++++|++.+++..+++...+..+.
T Consensus       152 GiT~y~alk~~~-~~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~-e~a~~lGAd~~i~~~~~~~~~~~~~~  229 (339)
T COG1064         152 GITTYRALKKAN-VKPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKL-ELAKKLGADHVINSSDSDALEAVKEI  229 (339)
T ss_pred             eeeEeeehhhcC-CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHH-HHHHHhCCcEEEEcCCchhhHHhHhh
Confidence            999999998855 8999999999999999999999999999999999999887 55689999999998888887777777


Q ss_pred             ccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC-CC-cccchhhhhcCceeEeeeccc
Q 021300          248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KP-LELPAFSLLMGEEEDSWWQHD  304 (314)
Q Consensus       248 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~-~~~~~~~~~~~~~~i~~~~~~  304 (314)
                      +|+++|+++ ..++...++.|+++|+++++|.++ .+ ..++...+++++++|.++...
T Consensus       230 ~d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g  287 (339)
T COG1064         230 ADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVG  287 (339)
T ss_pred             CcEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecC
Confidence            999999999 778999999999999999999985 44 568899999999999854443

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=6.3e-57  Score=387.89  Aligned_cols=304  Identities=54%  Similarity=0.896  Sum_probs=280.4

Q ss_pred             CCCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCC
Q 021300            5 PEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSK   84 (314)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (314)
                      +..|++...+++..+++..+++..++++|+++++||+|||+++|+|++|++.+.+.++..++|.++|||.+|+|+++|++
T Consensus         4 ~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~   83 (360)
T KOG0023|consen    4 MSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSN   83 (360)
T ss_pred             ccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCC
Confidence            34566667777776666556777999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCccccccc
Q 021300           85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPL  164 (314)
Q Consensus        85 v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~  164 (314)
                      |++|++||||-+-....+|++|++|..|++++|++..+.|++.+.+|+.++|+|++|+++++.+++++|++++.+.||++
T Consensus        84 V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPl  163 (360)
T KOG0023|consen   84 VTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPL  163 (360)
T ss_pred             cccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCC-CHHHHHH
Q 021300          165 LCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR-DQDEMQA  243 (314)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~-~~~~~~~  243 (314)
                      .|+..|+|.+|.+.+ +.||+++-|.|+|++|.+++|+||++|.+|+++.+++.+++++.+.|||+.+++.. ++|++++
T Consensus       164 LCaGITvYspLk~~g-~~pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~  242 (360)
T KOG0023|consen  164 LCAGITVYSPLKRSG-LGPGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKA  242 (360)
T ss_pred             hhcceEEeehhHHcC-CCCCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHH
Confidence            999999999999888 78999999999977999999999999999999999998889999999999988887 8999999


Q ss_pred             HcCCccEEEEccC--CcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeeeccccccCCCC
Q 021300          244 AMGTMDGIIDTVS--AVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWWQHDWGDEGDS  311 (314)
Q Consensus       244 ~~~~~d~v~d~~g--~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  311 (314)
                      +.+..|.++|++.  ....+..++.+|+++|++|++|.+..+..+++..+.++++.|.  ++..++..|.
T Consensus       243 ~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~--GS~vG~~ket  310 (360)
T KOG0023|consen  243 IMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIK--GSIVGSRKET  310 (360)
T ss_pred             HHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEE--eeccccHHHH
Confidence            9888888888877  6667999999999999999999999999999999999999998  4544544443

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.4e-50  Score=346.41  Aligned_cols=281  Identities=26%  Similarity=0.372  Sum_probs=242.4

Q ss_pred             ccccchhhhccCCCCccceeeeeecCC-CCCeEEEEEeeeccChhhhhhHhcCCCC---CCCCCcccccccEEEEEeCCC
Q 021300            9 HPKNAFGWAAKDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWGN---TIYPIVPGHEIVGVVTEVGSK   84 (314)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~a~~l~~~d~~~~~~~~~~---~~~p~~~G~e~~G~V~~vG~~   84 (314)
                      ..|++++|...   .++++.++|.|++ .|+||+|++.++|||++|++.+......   .+.|.++|||.+|+|+++|+.
T Consensus         3 ~~~~A~vl~g~---~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~   79 (354)
T KOG0024|consen    3 ADNLALVLRGK---GDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDE   79 (354)
T ss_pred             cccceeEEEcc---CceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccc
Confidence            35888888654   4488999999988 9999999999999999999998765432   268999999999999999999


Q ss_pred             CCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCccccccc
Q 021300           85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPL  164 (314)
Q Consensus        85 v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~  164 (314)
                      |+++++||||++.|.. +|..|+.|.+|+||+|+.+.+.-.+      ..+|++++|+..++++++++|+++|++++| +
T Consensus        80 Vk~LkVGDrVaiEpg~-~c~~cd~CK~GrYNlCp~m~f~atp------p~~G~la~y~~~~~dfc~KLPd~vs~eeGA-l  151 (354)
T KOG0024|consen   80 VKHLKVGDRVAIEPGL-PCRDCDFCKEGRYNLCPHMVFCATP------PVDGTLAEYYVHPADFCYKLPDNVSFEEGA-L  151 (354)
T ss_pred             ccccccCCeEEecCCC-ccccchhhhCcccccCCccccccCC------CcCCceEEEEEechHheeeCCCCCchhhcc-c
Confidence            9999999999999988 9999999999999999998765433      467999999999999999999999999987 4


Q ss_pred             chhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCC---HHH
Q 021300          165 LCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRD---QDE  240 (314)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~---~~~  240 (314)
                      ..+++.+++|.++.. +++|++|||+|+|++|+++...||++|+ +|++++-. +.+.+++++||++.+.+...   ++.
T Consensus       152 ~ePLsV~~HAcr~~~-vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~-~~Rle~Ak~~Ga~~~~~~~~~~~~~~  229 (354)
T KOG0024|consen  152 IEPLSVGVHACRRAG-VKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLV-ANRLELAKKFGATVTDPSSHKSSPQE  229 (354)
T ss_pred             ccchhhhhhhhhhcC-cccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecC-HHHHHHHHHhCCeEEeeccccccHHH
Confidence            456899999998766 8999999999999999999999999999 55555555 45557778899998876655   233


Q ss_pred             HHHHc----C--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeeec
Q 021300          241 MQAAM----G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWWQ  302 (314)
Q Consensus       241 ~~~~~----~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~~  302 (314)
                      +.+..    +  .+|++|||+|...++..++.+++.+|+++++|+-....+||+.++..+++.+.+.+
T Consensus       230 ~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~f  297 (354)
T KOG0024|consen  230 LAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSF  297 (354)
T ss_pred             HHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeee
Confidence            22222    2  49999999999999999999999999999999988899999999999999998544

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=4.9e-49  Score=363.23  Aligned_cols=300  Identities=68%  Similarity=1.188  Sum_probs=260.2

Q ss_pred             CCCCCCCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEE
Q 021300            1 MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTE   80 (314)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~   80 (314)
                      |...|+...|||++++...+.++.++..+++.|+|+++||+|||.++|||++|++++.|.++...+|.++|||++|+|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~   80 (360)
T PLN02586          1 MAKSPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTK   80 (360)
T ss_pred             CCCChhhhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEE
Confidence            66778888999999999988888899999999999999999999999999999999887665456789999999999999


Q ss_pred             eCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCccc
Q 021300           81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDA  160 (314)
Q Consensus        81 vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~  160 (314)
                      +|+++++|++||+|++.+...+|++|.+|++|.+++|++..+.+......|....|+|+||+.++.+.++++|+++++++
T Consensus        81 vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~  160 (360)
T PLN02586         81 LGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDA  160 (360)
T ss_pred             ECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHH
Confidence            99999999999999876666689999999999999999865432111111223479999999999999999999999999


Q ss_pred             ccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 021300          161 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (314)
Q Consensus       161 aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~  240 (314)
                      ++++++...|+|+++.....+++|++|||.|+|++|++++|+||.+|+++++++.+++++.++++++|++.++++.+.+.
T Consensus       161 aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~  240 (360)
T PLN02586        161 GAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEK  240 (360)
T ss_pred             hhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHH
Confidence            99999999999999977666789999999999999999999999999999888888877777888999999988777666


Q ss_pred             HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       241 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                      +.+..+++|++||++|....+..++++++++|+++.+|...++..++...++.+++.+.+
T Consensus       241 ~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g  300 (360)
T PLN02586        241 MKAAIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGG  300 (360)
T ss_pred             HHhhcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEE
Confidence            666666899999999986668899999999999999998766678888888888877763

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=4.7e-47  Score=330.42  Aligned_cols=283  Identities=24%  Similarity=0.371  Sum_probs=241.8

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      +++.+.+..++|  |+++++++++|++||||||+.|+|+|++|....+|..+.. +|.++|||++|+|++||++|+++++
T Consensus         3 ~~aAV~~~~~~P--l~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp   79 (366)
T COG1062           3 TRAAVAREAGKP--LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP   79 (366)
T ss_pred             ceEeeeecCCCC--eEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence            455555554454  9999999999999999999999999999999999998865 9999999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCcccc-ccccccCC-------------CCccCcccceEEeecCCceEECCCCC
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIM-TYANKYHD-------------GTITYGGYSDIMVADEHFVVRIPEGT  156 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~-~~~~~~~~-------------~~~~~g~~~~~~~v~~~~~~~~p~~~  156 (314)
                      ||+|+ ....+.||+|..|.+|.+|+|..... ...|....             .+...++|+||.++++..++++++..
T Consensus        80 GDhVI-~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~  158 (366)
T COG1062          80 GDHVI-LLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA  158 (366)
T ss_pred             CCEEE-EcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence            99995 56677999999999999999975422 11121111             12223589999999999999999999


Q ss_pred             CcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecC
Q 021300          157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVS  235 (314)
Q Consensus       157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~  235 (314)
                      +++.++.+.|...|.+.+..+..++++|+++.|+|.|.+|++++|-|+..|+ ++++++.++++. +++++||+++++|.
T Consensus       159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl-~~A~~fGAT~~vn~  237 (366)
T COG1062         159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKL-ELAKKFGATHFVNP  237 (366)
T ss_pred             CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHH-HHHHhcCCceeecc
Confidence            9999999999999999999899999999999999999999999999999999 788888888777 66689999999999


Q ss_pred             CCH----HHHHHHcC-CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC--CcccchhhhhcCceeEe
Q 021300          236 RDQ----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGEEEDS  299 (314)
Q Consensus       236 ~~~----~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~--~~~~~~~~~~~~~~~i~  299 (314)
                      ++.    +.+.++++ ++|.+||++|+..++.+++.++.++|+.+++|..+.  ..+++..++... +.++
T Consensus       238 ~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~  307 (366)
T COG1062         238 KEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWK  307 (366)
T ss_pred             hhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEE
Confidence            876    34556666 899999999999999999999999999999999764  345666666666 5555

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=8e-46  Score=343.21  Aligned_cols=291  Identities=63%  Similarity=1.116  Sum_probs=246.5

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      .++.++...+.++.++..+++.|+|+++||+|||.++|||++|++.+.|.+....+|.++|||++|+|+++|+++++|++
T Consensus         5 ~~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~v   84 (375)
T PLN02178          5 NKAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKE   84 (375)
T ss_pred             ceeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCC
Confidence            45566666666677888899999999999999999999999999998886644457899999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  170 (314)
                      ||||++.+...+|+.|.+|++|++++|++..+.+......|....|+|+||+.++++.++++|+++++++++++++...|
T Consensus        85 GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~t  164 (375)
T PLN02178         85 GDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGIT  164 (375)
T ss_pred             CCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchH
Confidence            99998766666799999999999999998654221110112234799999999999999999999999999999999999


Q ss_pred             hhhhhHhcCC-CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCcc
Q 021300          171 VYSPLRFYGL-DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD  249 (314)
Q Consensus       171 a~~~l~~~~~-~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d  249 (314)
                      +|+++..... .++|++|+|.|+|++|++++|+|+.+|+++++++++++++.++++++|++.++++.+.+.+.+..+++|
T Consensus       165 a~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~~~~~D  244 (375)
T PLN02178        165 VYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMD  244 (375)
T ss_pred             HHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHhhCCCc
Confidence            9999876553 368999999999999999999999999999988888777667778999999988776555556556899


Q ss_pred             EEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300          250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       250 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~  301 (314)
                      ++||++|....+..++++++++|+++.+|.+.++..++...++.+++++.++
T Consensus       245 ~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~  296 (375)
T PLN02178        245 FIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGS  296 (375)
T ss_pred             EEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEe
Confidence            9999999876689999999999999999987666788888888898888743

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=6.7e-45  Score=335.49  Aligned_cols=293  Identities=52%  Similarity=0.904  Sum_probs=250.7

Q ss_pred             CcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCC
Q 021300            7 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS   86 (314)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   86 (314)
                      ..+.++++++...+  +.+++.+++.|+|+++||+|||.+++||++|++.+.+.++...+|.++|||++|+|+++|++++
T Consensus         6 ~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~   83 (357)
T PLN02514          6 AEKKTTGWAARDPS--GHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVS   83 (357)
T ss_pred             CCceEEEEEEecCC--CCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcc
Confidence            34446666666543  5588899999999999999999999999999998887665446789999999999999999999


Q ss_pred             CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccch
Q 021300           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC  166 (314)
Q Consensus        87 ~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~  166 (314)
                      +|++||+|++.+...+|++|.+|.+|++++|.+..+.+++.+..|....|+|+||+.++...++++|+++++++++.+++
T Consensus        84 ~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  163 (357)
T PLN02514         84 KFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLC  163 (357)
T ss_pred             cccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhh
Confidence            99999999877777789999999999999998865433222222334579999999999999999999999999999999


Q ss_pred             hhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcC
Q 021300          167 AGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG  246 (314)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~  246 (314)
                      .+.|||+++......++|++++|+|+|++|++++|+||.+|+++++++++++++..+.+++|++.++++.+.+.+.+...
T Consensus       164 ~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~  243 (357)
T PLN02514        164 AGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAAD  243 (357)
T ss_pred             hHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHHhcC
Confidence            99999999987776689999999988999999999999999999999988888878878899988877766555666666


Q ss_pred             CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300          247 TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       247 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~  301 (314)
                      ++|++||++|...++..++++++++|+++.+|.+.++.+++...++.+++++.++
T Consensus       244 ~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~  298 (357)
T PLN02514        244 SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGS  298 (357)
T ss_pred             CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEE
Confidence            8999999999766789999999999999999987666778888888899888743

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.9e-45  Score=311.41  Aligned_cols=297  Identities=23%  Similarity=0.323  Sum_probs=250.3

Q ss_pred             CCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCC
Q 021300            6 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKV   85 (314)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   85 (314)
                      ..++.+|+.+++..+.|  |.++++.+++|+.+||+||+.++++|++|.+.+.|..+...+|.++|||++|+|+.+|++|
T Consensus         3 gkvI~CKAAV~w~a~~P--L~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV   80 (375)
T KOG0022|consen    3 GKVITCKAAVAWEAGKP--LVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGV   80 (375)
T ss_pred             CCceEEeEeeeccCCCC--eeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCc
Confidence            35677888888876665  8899999999999999999999999999999999987767899999999999999999999


Q ss_pred             CCCCCCCEEEecccccCCCCCccccCCCCCCCCcccccc--c-------------cccCCCCccCcccceEEeecCCceE
Q 021300           86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY--A-------------NKYHDGTITYGGYSDIMVADEHFVV  150 (314)
Q Consensus        86 ~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~--~-------------~~~~~~~~~~g~~~~~~~v~~~~~~  150 (314)
                      +++++||+|+ ....+.|+.|.+|.++.+|+|.......  .             +..-+.+....+|+||.+++...++
T Consensus        81 ~~vk~GD~Vi-plf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~  159 (375)
T KOG0022|consen   81 TTVKPGDHVI-PLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVA  159 (375)
T ss_pred             cccCCCCEEe-eccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeE
Confidence            9999999995 6677799999999999999997753322  1             1111111223489999999999999


Q ss_pred             ECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCC
Q 021300          151 RIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA  229 (314)
Q Consensus       151 ~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga  229 (314)
                      ++++..+.+.++.+.|.+.|.|.|..+.+.++||+++.|+|.|.+|+++++-||+.|| ++|.++.++++. +.+++||+
T Consensus       160 kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf-~~ak~fGa  238 (375)
T KOG0022|consen  160 KIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKF-EKAKEFGA  238 (375)
T ss_pred             ecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHH-HHHHhcCc
Confidence            9999999999999999999999999999999999999999999999999999999998 888888888777 55589999


Q ss_pred             cEEecCCCH-----HHHHHHcC-CccEEEEccCCcccHHHHHHhhccC-CEEEEEcCCCCC--cccchhhhhcCceeEe-
Q 021300          230 DSFLVSRDQ-----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEKP--LELPAFSLLMGEEEDS-  299 (314)
Q Consensus       230 ~~~v~~~~~-----~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~--~~~~~~~~~~~~~~i~-  299 (314)
                      +.++|+.|.     +.+.++++ ++|+.|||+|+..++..++...+.+ |+-+++|..+..  .++..++++. ++++. 
T Consensus       239 Te~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~-GR~~~G  317 (375)
T KOG0022|consen  239 TEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVT-GRTWKG  317 (375)
T ss_pred             ceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhcc-ccEEEE
Confidence            999998853     56667766 7999999999999999999999998 999999998644  5555566654 44443 


Q ss_pred             eecccccc
Q 021300          300 WWQHDWGD  307 (314)
Q Consensus       300 ~~~~~~~~  307 (314)
                      ..+-.|..
T Consensus       318 s~FGG~K~  325 (375)
T KOG0022|consen  318 SAFGGFKS  325 (375)
T ss_pred             Eecccccc
Confidence            33334443

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=3.1e-44  Score=332.79  Aligned_cols=287  Identities=28%  Similarity=0.407  Sum_probs=240.2

Q ss_pred             ccchhhhccCC------CCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCC
Q 021300           11 KNAFGWAAKDT------SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSK   84 (314)
Q Consensus        11 ~~~~~~~~~~~------~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (314)
                      ||++.+..++.      ++.+++++++.|+|+++||+|||.+++||++|++.+.|.++ ..+|.++|||++|+|+++|++
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~   79 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG   79 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence            78888887664      47799999999999999999999999999999999888654 357899999999999999999


Q ss_pred             CCCCCCCCEEEecccccCCCCCccccCCCCCCCCcccccc-ccccCCC-------------CccCcccceEEeecCCceE
Q 021300           85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY-ANKYHDG-------------TITYGGYSDIMVADEHFVV  150 (314)
Q Consensus        85 v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~~~~~~~-------------~~~~g~~~~~~~v~~~~~~  150 (314)
                      ++++++||||++.+. ..|+.|.+|+.|++|+|.+..... .|....+             ....|+|+||+.+++..++
T Consensus        80 v~~~~~GdrV~~~~~-~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~  158 (371)
T cd08281          80 VTDLEVGDHVVLVFV-PSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV  158 (371)
T ss_pred             CCcCCCCCEEEEccC-CCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceE
Confidence            999999999976443 489999999999999998753211 1110000             1123799999999999999


Q ss_pred             ECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCC
Q 021300          151 RIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA  229 (314)
Q Consensus       151 ~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga  229 (314)
                      ++|+++++++++.+++...|||+++.....+++|++|||+|+|++|++++|+|+.+|+ +|++++.+++++ ++++++|+
T Consensus       159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~-~~a~~~Ga  237 (371)
T cd08281         159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKL-ALARELGA  237 (371)
T ss_pred             ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHH-HHHHHcCC
Confidence            9999999999999999999999998666678999999999999999999999999999 587777777666 56689999


Q ss_pred             cEEecCCCHHH---HHHHcC-CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC--CcccchhhhhcCceeEee
Q 021300          230 DSFLVSRDQDE---MQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       230 ~~~v~~~~~~~---~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~--~~~~~~~~~~~~~~~i~~  300 (314)
                      +.++++.+.+.   +.++++ ++|++||++|....+..++++++++|+++.+|...+  ...++...++.+++++.+
T Consensus       238 ~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g  314 (371)
T cd08281         238 TATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKG  314 (371)
T ss_pred             ceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEE
Confidence            99998877543   333333 699999999987679999999999999999998643  456777888889999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.6e-43  Score=329.13  Aligned_cols=290  Identities=24%  Similarity=0.316  Sum_probs=235.6

Q ss_pred             CCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC-CCCCCCcccccccEEEEEeCCC
Q 021300            6 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSK   84 (314)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~   84 (314)
                      ..+++||++++...+  +.+++++++.|+|+++||+|||+++|||++|++.+.|.++ ...+|.++|||++|+|+++|++
T Consensus         6 ~~~~~mka~~~~~~~--~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~   83 (381)
T PLN02740          6 GKVITCKAAVAWGPG--EPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEG   83 (381)
T ss_pred             ccceeeEEEEEecCC--CCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCC
Confidence            355679988886533  3477889999999999999999999999999999888654 2357899999999999999999


Q ss_pred             CCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccc-------cccC----------CCCccCcccceEEeecCC
Q 021300           85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-------NKYH----------DGTITYGGYSDIMVADEH  147 (314)
Q Consensus        85 v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~-------~~~~----------~~~~~~g~~~~~~~v~~~  147 (314)
                      +++|++||||++.+.. +|++|.+|.+|.+++|++......       +...          ......|+|+||+.++..
T Consensus        84 v~~~~vGdrV~~~~~~-~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~  162 (381)
T PLN02740         84 VEDLKAGDHVIPIFNG-ECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSA  162 (381)
T ss_pred             CCcCCCCCEEEecCCC-CCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehH
Confidence            9999999999876654 899999999999999998643110       0000          001136999999999999


Q ss_pred             ceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHH
Q 021300          148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIER  226 (314)
Q Consensus       148 ~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~  226 (314)
                      .++++|+++++++++.+++++.|+|+++.....+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++. +++++
T Consensus       163 ~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~-~~a~~  241 (381)
T PLN02740        163 CVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKF-EKGKE  241 (381)
T ss_pred             HeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHH-HHHHH
Confidence            9999999999999999999999999988766678999999999999999999999999999 588887777766 55588


Q ss_pred             cCCcEEecCCCH-----HHHHHHcC-CccEEEEccCCcccHHHHHHhhccC-CEEEEEcCCCCC--cccchhhhhcCcee
Q 021300          227 LGADSFLVSRDQ-----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEKP--LELPAFSLLMGEEE  297 (314)
Q Consensus       227 ~ga~~~v~~~~~-----~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~--~~~~~~~~~~~~~~  297 (314)
                      +|++.++++.+.     +.+.++.+ ++|++||++|+...+..++++++++ |+++.+|.+.++  ..++...+. ++++
T Consensus       242 ~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~-~~~~  320 (381)
T PLN02740        242 MGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELF-DGRS  320 (381)
T ss_pred             cCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHh-cCCe
Confidence            999998887652     23444444 7999999999877789999999996 999999987654  334444343 6777


Q ss_pred             Eee
Q 021300          298 DSW  300 (314)
Q Consensus       298 i~~  300 (314)
                      +.+
T Consensus       321 i~g  323 (381)
T PLN02740        321 ITG  323 (381)
T ss_pred             EEE
Confidence            763

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=3.7e-44  Score=324.66  Aligned_cols=262  Identities=29%  Similarity=0.399  Sum_probs=228.8

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcC-CCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE-WGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      |+++.+...+.+..++++++|.|+|++|||||||++++||+.|.+.+.|. .+..++|+++|.|++|+|+++|+++++|+
T Consensus         1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~   80 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK   80 (326)
T ss_pred             CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence            67888888888877999999999999999999999999999999999987 33346899999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||||+....                                ....|+|+||+.++++.++++|+++|+++||++++++.
T Consensus        81 ~GdrV~~~~~--------------------------------~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~  128 (326)
T COG0604          81 VGDRVAALGG--------------------------------VGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGL  128 (326)
T ss_pred             CCCEEEEccC--------------------------------CCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHH
Confidence            9999975210                                00579999999999999999999999999999999999


Q ss_pred             hhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHHc
Q 021300          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM  245 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~~~  245 (314)
                      |||+++....++++|++|||+|+ |++|++++|+||++|+++++++.++++.+ +++++|++.++++.+.+   .+++++
T Consensus       129 TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~vi~y~~~~~~~~v~~~t  207 (326)
T COG0604         129 TAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADHVINYREEDFVEQVRELT  207 (326)
T ss_pred             HHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCEEEcCCcccHHHHHHHHc
Confidence            99999998888999999999986 99999999999999998888888888887 77999999999988864   444555


Q ss_pred             C--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC--CcccchhhhhcCceeEeeeccccc
Q 021300          246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGEEEDSWWQHDWG  306 (314)
Q Consensus       246 ~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~--~~~~~~~~~~~~~~~i~~~~~~~~  306 (314)
                      +  ++|+|||++|... +..+++.|+++|+++.+|.+++  +..++...+..+...+.++...+.
T Consensus       208 ~g~gvDvv~D~vG~~~-~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~  271 (326)
T COG0604         208 GGKGVDVVLDTVGGDT-FAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSR  271 (326)
T ss_pred             CCCCceEEEECCCHHH-HHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceec
Confidence            4  5999999999985 8899999999999999998873  556777777778888775554433

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-43  Score=324.53  Aligned_cols=281  Identities=22%  Similarity=0.310  Sum_probs=228.4

Q ss_pred             ccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHh-cCCC--CCCCCCcccccccEEEEEeCCCC
Q 021300            9 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIK-NEWG--NTIYPIVPGHEIVGVVTEVGSKV   85 (314)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~-~~~~--~~~~p~~~G~e~~G~V~~vG~~v   85 (314)
                      ..+++.++.   .+..+++++++.| ++++||||||.++|||++|++.+. +..+  ...+|.++|||++|+|+++  ++
T Consensus         3 ~~~~~~~~~---~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v   76 (343)
T PRK09880          3 VKTQSCVVA---GKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DS   76 (343)
T ss_pred             ccceEEEEe---cCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cC
Confidence            456666665   3445888999987 689999999999999999999875 3332  2367999999999999999  78


Q ss_pred             CCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccc
Q 021300           86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL  165 (314)
Q Consensus        86 ~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~  165 (314)
                      ++|++||||++.+.. +|++|.+|.+|.+++|++..+.  +.........|+|+||++++++.++++|+++++++++ +.
T Consensus        77 ~~~~vGdrV~~~~~~-~cg~c~~c~~g~~~~c~~~~~~--g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~  152 (343)
T PRK09880         77 SGLKEGQTVAINPSK-PCGHCKYCLSHNENQCTTMRFF--GSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FA  152 (343)
T ss_pred             ccCCCCCEEEECCCC-CCcCChhhcCCChhhCCCccee--ecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hh
Confidence            899999999877654 8999999999999999986431  2111111247999999999999999999999987655 55


Q ss_pred             hhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHH--
Q 021300          166 CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ--  242 (314)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~--  242 (314)
                      .++.++|+++.+.. ..+|++|+|+|+|++|++++|+|+.+|+ ++++++++++++ ++++++|++.++++++.+...  
T Consensus       153 ~~~~~a~~al~~~~-~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~-~~a~~lGa~~vi~~~~~~~~~~~  230 (343)
T PRK09880        153 EPLAVAIHAAHQAG-DLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSL-SLAREMGADKLVNPQNDDLDHYK  230 (343)
T ss_pred             cHHHHHHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHH-HHHHHcCCcEEecCCcccHHHHh
Confidence            66789999997765 4689999999999999999999999999 577777777666 666889999999887654322  


Q ss_pred             HHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300          243 AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       243 ~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~  301 (314)
                      +..+++|++||++|...++..++++++++|+++.+|......+++...++.+++++.+.
T Consensus       231 ~~~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~  289 (343)
T PRK09880        231 AEKGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGS  289 (343)
T ss_pred             ccCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEE
Confidence            12235999999999876789999999999999999987666788888888899888743

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=4.8e-43  Score=325.32  Aligned_cols=285  Identities=20%  Similarity=0.278  Sum_probs=230.8

Q ss_pred             ccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 021300            9 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKF   88 (314)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   88 (314)
                      ..||++++..  ..+.+++++++.|+|+++||+|||.++|||++|++.+.+..   .+|.++|||++|+|+++|+++++|
T Consensus        11 ~~mka~~~~~--~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~   85 (378)
T PLN02827         11 ITCRAAVAWG--AGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEF   85 (378)
T ss_pred             ceeEEEEEec--CCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCccc
Confidence            4578777754  34458889999999999999999999999999999876632   467899999999999999999999


Q ss_pred             CCCCEEEecccccCCCCCccccCCCCCCCCcccccccccc--------------CCCCccCcccceEEeecCCceEECCC
Q 021300           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY--------------HDGTITYGGYSDIMVADEHFVVRIPE  154 (314)
Q Consensus        89 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~--------------~~~~~~~g~~~~~~~v~~~~~~~~p~  154 (314)
                      ++||+|++.+.. +|++|.+|++|.+++|++......+..              ..+....|+|+||+.+++..++++|+
T Consensus        86 ~~GdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~  164 (378)
T PLN02827         86 EKGDHVLTVFTG-ECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDP  164 (378)
T ss_pred             CCCCEEEEecCC-CCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCC
Confidence            999999876544 899999999999999987532111100              00011358999999999999999999


Q ss_pred             CCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEe
Q 021300          155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFL  233 (314)
Q Consensus       155 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v  233 (314)
                      ++++++++.+++.+.++|+++....++++|++|||+|+|++|++++|+|+.+|++ +++++.++++. ++++++|++.++
T Consensus       165 ~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~-~~a~~lGa~~~i  243 (378)
T PLN02827        165 LAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKA-EKAKTFGVTDFI  243 (378)
T ss_pred             CCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHHHcCCcEEE
Confidence            9999999988888889998876666789999999999999999999999999995 55555566655 566899999988


Q ss_pred             cCCCH--H---HHHHHcC-CccEEEEccCCcccHHHHHHhhccC-CEEEEEcCCCCCcccch-hhhhcCceeEee
Q 021300          234 VSRDQ--D---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEKPLELPA-FSLLMGEEEDSW  300 (314)
Q Consensus       234 ~~~~~--~---~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~-~~~~~~~~~i~~  300 (314)
                      ++++.  +   .++++++ ++|++||++|....+..+++.++++ |+++.+|.+..+..++. ..++.+++++.+
T Consensus       244 ~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g  318 (378)
T PLN02827        244 NPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKG  318 (378)
T ss_pred             cccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEe
Confidence            87652  2   2334443 7999999999876689999999998 99999998765455544 457778888874

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=5.1e-43  Score=323.17  Aligned_cols=286  Identities=24%  Similarity=0.359  Sum_probs=237.3

Q ss_pred             cccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      +||++++...+.+  +++++++.|+|+++||+|||.++|+|++|++.+.|.++ ..+|.++|||++|+|+++|+++++|+
T Consensus         1 ~mka~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~   77 (358)
T TIGR03451         1 TVRGVIARSKGAP--VELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVA   77 (358)
T ss_pred             CcEEEEEccCCCC--CEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccC
Confidence            4899999876544  78899999999999999999999999999998887654 35789999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccc-cCCCC-----ccCcccceEEeecCCceEECCCCCCcccccc
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK-YHDGT-----ITYGGYSDIMVADEHFVVRIPEGTPLDATAP  163 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~-~~~~~-----~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~  163 (314)
                      +||+|++.+. .+|+.|.+|.+|.+++|.......... ...|.     ...|+|+||+.+++..++++|+++++++++.
T Consensus        78 ~GdrV~~~~~-~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~  156 (358)
T TIGR03451        78 PGDYVVLNWR-AVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGL  156 (358)
T ss_pred             CCCEEEEccC-CCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhh
Confidence            9999987655 489999999999999998532110000 00010     1359999999999999999999999999999


Q ss_pred             cchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHHH--
Q 021300          164 LLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDE--  240 (314)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~--  240 (314)
                      +++.+.++|.++.....+++|++|||+|+|++|++++|+|+.+|++ +++++++++++ ++++++|++.++++.+.+.  
T Consensus       157 l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~-~~~~~~Ga~~~i~~~~~~~~~  235 (358)
T TIGR03451       157 LGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKL-EWAREFGATHTVNSSGTDPVE  235 (358)
T ss_pred             hcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHHcCCceEEcCCCcCHHH
Confidence            9999999998887777789999999999999999999999999995 77777776665 5558899999998876543  


Q ss_pred             -HHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC--CcccchhhhhcCceeEee
Q 021300          241 -MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       241 -~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~--~~~~~~~~~~~~~~~i~~  300 (314)
                       +.+..+  ++|++||++|+..++..++++++++|+++.+|.+..  +.+++...++.+++++.+
T Consensus       236 ~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~  300 (358)
T TIGR03451       236 AIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKS  300 (358)
T ss_pred             HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEE
Confidence             444443  699999999987678999999999999999998754  356777788888888873

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=5e-43  Score=319.51  Aligned_cols=272  Identities=29%  Similarity=0.433  Sum_probs=232.6

Q ss_pred             hhhccCCC--CccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCC
Q 021300           15 GWAAKDTS--GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD   92 (314)
Q Consensus        15 ~~~~~~~~--~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd   92 (314)
                      .+..++.+  ..++++++|.|+|+++||+|||+++|||++|++.+.|.++...+|.++|||++|+|+++|+++++|++||
T Consensus         3 ~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   82 (329)
T TIGR02822         3 EVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVGD   82 (329)
T ss_pred             eeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCCC
Confidence            34444444  4688999999999999999999999999999999988765444578999999999999999999999999


Q ss_pred             EEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhh
Q 021300           93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVY  172 (314)
Q Consensus        93 ~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~  172 (314)
                      +|++.+...+|+.|.+|..|++++|+++.+.       |....|+|+||+.++...++++|+++++++++++++.+.|||
T Consensus        83 ~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~  155 (329)
T TIGR02822        83 RVGIAWLRRTCGVCRYCRRGAENLCPASRYT-------GWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGY  155 (329)
T ss_pred             EEEEcCccCcCCCChHHhCcCcccCCCcccC-------CcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHH
Confidence            9988777778999999999999999885431       234579999999999999999999999999999999999999


Q ss_pred             hhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEE
Q 021300          173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII  252 (314)
Q Consensus       173 ~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~  252 (314)
                      +++.. ..+++|++|||+|+|++|++++|+|+.+|+++++++++++++ ++++++|++.++++.+.+     .+++|+++
T Consensus       156 ~~~~~-~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~-~~a~~~Ga~~vi~~~~~~-----~~~~d~~i  228 (329)
T TIGR02822       156 RALLR-ASLPPGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAAR-RLALALGAASAGGAYDTP-----PEPLDAAI  228 (329)
T ss_pred             HHHHh-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHH-HHHHHhCCceeccccccC-----cccceEEE
Confidence            99975 558999999999999999999999999999998888887765 677899999988754321     24689999


Q ss_pred             EccCCcccHHHHHHhhccCCEEEEEcCCC-CCcccchhhhhcCceeEee
Q 021300          253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       253 d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~i~~  300 (314)
                      ++.+...++..++++++++|+++.+|... ....++...++.+++++.+
T Consensus       229 ~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g  277 (329)
T TIGR02822       229 LFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRS  277 (329)
T ss_pred             ECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEE
Confidence            98887778999999999999999999853 3346777777788888874

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=5.7e-43  Score=323.93  Aligned_cols=279  Identities=22%  Similarity=0.331  Sum_probs=227.6

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      |+++.+...  ++.++++++|.|+|+++||+|||.++|||++|++.+.|.++...+|.++|||++|+|+++|+++++|++
T Consensus         2 ~~a~~~~~~--~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~   79 (368)
T TIGR02818         2 SRAAVAWAA--GQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKV   79 (368)
T ss_pred             ceEEEEecC--CCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCC
Confidence            667776653  345888999999999999999999999999999998887655567999999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccc-cccccC-------------CCCccCcccceEEeecCCceEECCCCC
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT-YANKYH-------------DGTITYGGYSDIMVADEHFVVRIPEGT  156 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~~~~~-------------~~~~~~g~~~~~~~v~~~~~~~~p~~~  156 (314)
                      ||||++.+. .+|++|.+|+.|++|+|++.... +.+...             ......|+|+||+.++...++++|+++
T Consensus        80 GdrV~~~~~-~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l  158 (368)
T TIGR02818        80 GDHVIPLYT-AECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA  158 (368)
T ss_pred             CCEEEEcCC-CCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCC
Confidence            999987554 48999999999999999875321 011000             001124799999999999999999999


Q ss_pred             CcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecC
Q 021300          157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVS  235 (314)
Q Consensus       157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~  235 (314)
                      ++++++.+++++.|+|+++....++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++++|++.++++
T Consensus       159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~-~~a~~~Ga~~~i~~  237 (368)
T TIGR02818       159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKF-ELAKKLGATDCVNP  237 (368)
T ss_pred             CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHHhCCCeEEcc
Confidence            9999999999999999998766678999999999999999999999999999 688887877766 55588999998887


Q ss_pred             CC--H---HHHHHHcC-CccEEEEccCCcccHHHHHHhhccC-CEEEEEcCCCC--Ccccchhhhhc
Q 021300          236 RD--Q---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLLM  293 (314)
Q Consensus       236 ~~--~---~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~--~~~~~~~~~~~  293 (314)
                      .+  .   +.+.++++ ++|++||++|+...+..++++++++ |+++.+|.+..  +..+....++.
T Consensus       238 ~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~  304 (368)
T TIGR02818       238 NDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVT  304 (368)
T ss_pred             cccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhc
Confidence            63  2   23444443 7999999999876789999999886 99999998643  34444454443

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=1.5e-42  Score=317.58  Aligned_cols=277  Identities=28%  Similarity=0.409  Sum_probs=232.3

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ||++++.   +++.+++++++.|+|.++||+|||.++++|++|++.+.+.+.. ...|.++|||++|+|+++|+++++++
T Consensus         1 mka~~~~---~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   77 (339)
T cd08239           1 MRGAVFP---GDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFR   77 (339)
T ss_pred             CeEEEEe---cCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCC
Confidence            6777775   3456899999999999999999999999999999988765432 23578999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||+|++.+.. +|++|.+|.+|++++|.+....      .|....|+|+||+.++.+.++++|+++++++++.+++++.
T Consensus        78 ~Gd~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~------~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~  150 (339)
T cd08239          78 VGDRVMVYHYV-GCGACRNCRRGWMQLCTSKRAA------YGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIG  150 (339)
T ss_pred             CCCEEEECCCC-CCCCChhhhCcCcccCcCcccc------cccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHH
Confidence            99999876555 8999999999999999876431      1334579999999999999999999999999999999999


Q ss_pred             hhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHH--HHHHHcC
Q 021300          170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQAAMG  246 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~--~~~~~~~  246 (314)
                      |||+++.... +++|++|||+|+|++|++++|+++.+|++ ++++++++++. ++++++|++.++++++.+  .+.+..+
T Consensus       151 ta~~~l~~~~-~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~-~~~~~~ga~~~i~~~~~~~~~~~~~~~  228 (339)
T cd08239         151 TAYHALRRVG-VSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERL-ELAKALGADFVINSGQDDVQEIRELTS  228 (339)
T ss_pred             HHHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHhCCCEEEcCCcchHHHHHHHhC
Confidence            9999997654 78999999999999999999999999998 88877777766 455889999999887643  3333333


Q ss_pred             --CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccch-hhhhcCceeEee
Q 021300          247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA-FSLLMGEEEDSW  300 (314)
Q Consensus       247 --~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~-~~~~~~~~~i~~  300 (314)
                        ++|++||++|+...+..++++++++|+++.+|.... ..++. ..++.+++++.+
T Consensus       229 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g  284 (339)
T cd08239         229 GAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGE-LTIEVSNDLIRKQRTLIG  284 (339)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCC-cccCcHHHHHhCCCEEEE
Confidence              699999999988766889999999999999998654 23443 456778888873

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=9.4e-43  Score=322.68  Aligned_cols=286  Identities=22%  Similarity=0.343  Sum_probs=234.7

Q ss_pred             cccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      +||++++...+  +.+++++++.|+|+++||+|||.+++||++|++.+.|..+...+|.++|||++|+|+++|+++++|+
T Consensus         2 ~~ka~~~~~~~--~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   79 (369)
T cd08301           2 TCKAAVAWEAG--KPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLK   79 (369)
T ss_pred             ccEEEEEecCC--CCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccc
Confidence            58888887643  3488999999999999999999999999999999888766567899999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccc-ccccc--------------CCCCccCcccceEEeecCCceEECCC
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT-YANKY--------------HDGTITYGGYSDIMVADEHFVVRIPE  154 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~~~~--------------~~~~~~~g~~~~~~~v~~~~~~~~p~  154 (314)
                      +||||++.+. .+|++|.+|.+|+++.|.+.... ..+..              .+.....|+|+||+.++...++++|+
T Consensus        80 ~GdrV~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~  158 (369)
T cd08301          80 PGDHVLPVFT-GECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINP  158 (369)
T ss_pred             cCCEEEEccC-CCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCC
Confidence            9999986554 48999999999999999885321 01110              00111358999999999999999999


Q ss_pred             CCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEe
Q 021300          155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFL  233 (314)
Q Consensus       155 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v  233 (314)
                      ++++++++.+++.+.|+|.++.....+++|++|||+|+|++|++++|+|+.+|+ +++++++++++.+ +++++|++.++
T Consensus       159 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~-~~~~~Ga~~~i  237 (369)
T cd08301         159 EAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFE-QAKKFGVTEFV  237 (369)
T ss_pred             CCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHHHcCCceEE
Confidence            999999999999999999988766678999999999999999999999999999 7888888877764 55889999888


Q ss_pred             cCCCH-----HHHHHHcC-CccEEEEccCCcccHHHHHHhhccC-CEEEEEcCCCC--CcccchhhhhcCceeEee
Q 021300          234 VSRDQ-----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       234 ~~~~~-----~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~--~~~~~~~~~~~~~~~i~~  300 (314)
                      ++.+.     +.++++.+ ++|++||++|....+..++++++++ |+++.+|....  +.+++...++ +++++.+
T Consensus       238 ~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g  312 (369)
T cd08301         238 NPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL-NGRTLKG  312 (369)
T ss_pred             cccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh-cCCeEEE
Confidence            87642     23334433 6999999999876688999999996 99999998764  3445544444 6777763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=2.1e-42  Score=317.00  Aligned_cols=270  Identities=29%  Similarity=0.366  Sum_probs=218.0

Q ss_pred             ceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCC-cccccccEEEEEeCCCCCCCCCCCEEEecccccCCC
Q 021300           26 SPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI-VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCR  104 (314)
Q Consensus        26 ~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~  104 (314)
                      ++++.+.|.+.|++|+|||.++|||++|++.+.+..+....|. ++|||++|+|+++| .++.+++||||++.+.. +|+
T Consensus        14 ~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv~~~~-~Cg   91 (350)
T COG1063          14 RLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNI-PCG   91 (350)
T ss_pred             ccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCCCEEEECCCc-CCC
Confidence            3667766778999999999999999999999999877666666 99999999999999 77889999999887666 999


Q ss_pred             CCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEE-CCCCCCcccccccchhhhhhhhhhHhcCCCCC
Q 021300          105 SCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVR-IPEGTPLDATAPLLCAGITVYSPLRFYGLDKP  183 (314)
Q Consensus       105 ~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~-~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~  183 (314)
                      .|.+|+.|.+|+|++..+  .+....+...+|+|+||+.+|.++.+. +|+++ ..+++++..++.++|++.......++
T Consensus        92 ~C~~C~~G~~~~C~~~~~--~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~a~~~~~~~  168 (350)
T COG1063          92 HCRYCRAGEYNLCENPGF--YGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYHGHAERAAVRP  168 (350)
T ss_pred             CChhHhCcCcccCCCccc--cccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhhhhhhccCCCC
Confidence            999999999999995532  222222223689999999999755555 58887 56666788899999887544444567


Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHH-cCCcEEecCCCH---HHHHHHcC--CccEEEEccC
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIER-LGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVS  256 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~-~ga~~~v~~~~~---~~~~~~~~--~~d~v~d~~g  256 (314)
                      +++|+|+|+|++|++++++++.+|+ ++++++.+++|+ +++++ ++++.+++....   ..+.+.++  ++|++|||+|
T Consensus       169 ~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl-~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~G  247 (350)
T COG1063         169 GGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERL-ELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAVG  247 (350)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH-HHHHHhCCCeEeecCccccHHHHHHHHhCCCCCCEEEECCC
Confidence            7799999999999999999999998 555555666655 55566 777877776552   34445554  5999999999


Q ss_pred             CcccHHHHHHhhccCCEEEEEcCCCCCc-ccchhhhhcCceeEeee
Q 021300          257 AVHPLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       257 ~~~~~~~~~~~l~~~G~~v~~G~~~~~~-~~~~~~~~~~~~~i~~~  301 (314)
                      ...++..++++++++|+++.+|.+.+.. .++...++.|++++.+.
T Consensus       248 ~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs  293 (350)
T COG1063         248 SPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGS  293 (350)
T ss_pred             CHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEec
Confidence            8888999999999999999999987665 78889999999999854

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=6.3e-42  Score=317.01  Aligned_cols=279  Identities=24%  Similarity=0.345  Sum_probs=227.8

Q ss_pred             cccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      .||++.+...  +++++++++|.|+|.++||+|||+++|||++|++.+.|.++...+|.++|||++|+|+++|+++++|+
T Consensus         2 ~~~a~~~~~~--~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   79 (368)
T cd08300           2 TCKAAVAWEA--GKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVK   79 (368)
T ss_pred             cceEEEEecC--CCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCC
Confidence            4777776653  34588899999999999999999999999999999888766557899999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccc-cccccC-------------CCCccCcccceEEeecCCceEECCCC
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT-YANKYH-------------DGTITYGGYSDIMVADEHFVVRIPEG  155 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~~~~~-------------~~~~~~g~~~~~~~v~~~~~~~~p~~  155 (314)
                      +||+|++.+. .+|+.|.+|++|++++|.+.... +.|...             ......|+|+||+.++...++++|++
T Consensus        80 vGdrV~~~~~-~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~  158 (368)
T cd08300          80 PGDHVIPLYT-PECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPE  158 (368)
T ss_pred             CCCEEEEcCC-CCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCC
Confidence            9999986544 59999999999999999875311 001000             00113479999999999999999999


Q ss_pred             CCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEec
Q 021300          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLV  234 (314)
Q Consensus       156 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~  234 (314)
                      +++++++.+++++.|+|+++....++++|++|||+|+|++|++++|+|+.+|+ +++++++++++.+ +++++|++.+++
T Consensus       159 l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~-~~~~lGa~~~i~  237 (368)
T cd08300         159 APLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFE-LAKKFGATDCVN  237 (368)
T ss_pred             CChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHH-HHHHcCCCEEEc
Confidence            99999999999999999998666678999999999999999999999999999 6888888887765 558899999998


Q ss_pred             CCCH-----HHHHHHcC-CccEEEEccCCcccHHHHHHhhccC-CEEEEEcCCCC--Ccccchhhhh
Q 021300          235 SRDQ-----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLL  292 (314)
Q Consensus       235 ~~~~-----~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~--~~~~~~~~~~  292 (314)
                      +.+.     +.+.++++ ++|++||++|+...+..++++++++ |+++.+|....  +..++...+.
T Consensus       238 ~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~  304 (368)
T cd08300         238 PKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV  304 (368)
T ss_pred             ccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh
Confidence            7653     23334444 7999999999866789999999886 99999998643  3344444444

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=7.5e-42  Score=316.15  Aligned_cols=284  Identities=26%  Similarity=0.390  Sum_probs=234.0

Q ss_pred             cccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      +||++++...+  +.++++++|.|.++++||+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|+++++++
T Consensus         2 ~~ka~~~~~~~--~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~   78 (365)
T cd08277           2 KCKAAVAWEAG--KPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLK   78 (365)
T ss_pred             ccEEEEEccCC--CCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCC
Confidence            57777776543  3488999999999999999999999999999999887654 46789999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCC-------------CccCcccceEEeecCCceEECCCCC
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDG-------------TITYGGYSDIMVADEHFVVRIPEGT  156 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~-------------~~~~g~~~~~~~v~~~~~~~~p~~~  156 (314)
                      +||+|++.+. .+|++|.+|.+|.+++|++..+...+....+             ....|+|+||+.++...++++|+++
T Consensus        79 ~GdrV~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l  157 (365)
T cd08277          79 PGDKVIPLFI-GQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA  157 (365)
T ss_pred             CCCEEEECCC-CCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCC
Confidence            9999976544 5999999999999999998654333222111             1135899999999999999999999


Q ss_pred             CcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecC
Q 021300          157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVS  235 (314)
Q Consensus       157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~  235 (314)
                      ++++++.+++++.|||+++.....+++|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++++|++.+++.
T Consensus       158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~-~~~~~~ga~~~i~~  236 (365)
T cd08277         158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKF-EKAKEFGATDFINP  236 (365)
T ss_pred             CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHHHHcCCCcEecc
Confidence            9999999999999999988666678999999999999999999999999999 688888777666 45578999998887


Q ss_pred             CCH-----HHHHHHc-CCccEEEEccCCcccHHHHHHhhccC-CEEEEEcCCCC-CcccchhhhhcCceeEe
Q 021300          236 RDQ-----DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK-PLELPAFSLLMGEEEDS  299 (314)
Q Consensus       236 ~~~-----~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~-~~~~~~~~~~~~~~~i~  299 (314)
                      .+.     +.+.+.+ +++|++||++|+...+..++++++++ |+++.+|...+ ..+++...++. ++++.
T Consensus       237 ~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~  307 (365)
T cd08277         237 KDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWK  307 (365)
T ss_pred             ccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEE
Confidence            642     3344444 37999999999776688999999885 99999998653 45666666664 66776

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=8.9e-42  Score=314.55  Aligned_cols=280  Identities=23%  Similarity=0.313  Sum_probs=218.8

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC---CCCCCcccccccEEEEEeCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN---TIYPIVPGHEIVGVVTEVGSKVSK   87 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~---~~~p~~~G~e~~G~V~~vG~~v~~   87 (314)
                      |+++++.. +++. ++++++|.|+|+++||||||+++|||++|++.+.|.++.   ..+|.++|||++|+|+++|++ ++
T Consensus         1 mka~~~~~-~~~~-l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~   77 (355)
T cd08230           1 MKAIAVKP-GKPG-VRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SG   77 (355)
T ss_pred             CceeEecC-CCCC-CeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CC
Confidence            67777764 3333 889999999999999999999999999999999886532   245789999999999999999 99


Q ss_pred             CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (314)
Q Consensus        88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~  167 (314)
                      |++||||++.+. .+|++|.+|.+|++++|.+..+...|.    ....|+|+||+.++++.++++|++++ ++ +.+..+
T Consensus        78 ~~vGdrV~~~~~-~~cg~C~~c~~g~~~~c~~~~~~~~g~----~~~~G~~aey~~~~~~~~~~~P~~~~-~~-a~~~~p  150 (355)
T cd08230          78 LSPGDLVVPTVR-RPPGKCLNCRIGRPDFCETGEYTERGI----KGLHGFMREYFVDDPEYLVKVPPSLA-DV-GVLLEP  150 (355)
T ss_pred             CCCCCEEEeccc-cCCCcChhhhCcCcccCCCcceeccCc----CCCCccceeEEEeccccEEECCCCCC-cc-eeecch
Confidence            999999976554 489999999999999998754322121    12469999999999999999999998 43 344445


Q ss_pred             hhhhhhhhHhc------CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC--hhhHHHHHHHcCCcEEecCCCHH
Q 021300          168 GITVYSPLRFY------GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS--PSKKSEAIERLGADSFLVSRDQD  239 (314)
Q Consensus       168 ~~ta~~~l~~~------~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~--~~~~~~~~~~~ga~~~v~~~~~~  239 (314)
                      +.+++.++...      ..+++|++|+|+|+|++|++++|+||.+|+++++++++  .+++.++++++|++. +++.+.+
T Consensus       151 ~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~  229 (355)
T cd08230         151 LSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATY-VNSSKTP  229 (355)
T ss_pred             HHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE-ecCCccc
Confidence            55544443221      12578999999999999999999999999999888873  233446778999987 4555433


Q ss_pred             HH-HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC--Ccccc----hhhhhcCceeEeee
Q 021300          240 EM-QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELP----AFSLLMGEEEDSWW  301 (314)
Q Consensus       240 ~~-~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~--~~~~~----~~~~~~~~~~i~~~  301 (314)
                      .. ....+++|++||++|+...+..+++.++++|+++.+|.+.+  +.+++    ...++.+++++.++
T Consensus       230 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~  298 (355)
T cd08230         230 VAEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGS  298 (355)
T ss_pred             hhhhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEe
Confidence            21 12235799999999987668999999999999999998765  44565    35677788888753

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=7e-42  Score=318.45  Aligned_cols=264  Identities=22%  Similarity=0.306  Sum_probs=210.9

Q ss_pred             cccchhhhccCCCCccceeeeeecCCC-------CCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeC
Q 021300           10 PKNAFGWAAKDTSGVLSPFHFSRRATG-------EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVG   82 (314)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~-------~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG   82 (314)
                      -||++++..   ++.++++++|.|+|+       +|||||||.++|||++|++++.|.+. ..+|.++|||++|+|+++|
T Consensus         2 ~mka~v~~~---~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG   77 (393)
T TIGR02819         2 GNRGVVYLG---PGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKG   77 (393)
T ss_pred             CceEEEEec---CCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEc
Confidence            378887754   334888999999874       68999999999999999999887654 3578999999999999999


Q ss_pred             CCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccc----cccccCCCCccCcccceEEeecCC--ceEECCCCC
Q 021300           83 SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT----YANKYHDGTITYGGYSDIMVADEH--FVVRIPEGT  156 (314)
Q Consensus        83 ~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~----~~~~~~~~~~~~g~~~~~~~v~~~--~~~~~p~~~  156 (314)
                      +++++|++||||++.+.. +|++|.+|++|++|+|.+....    +.+.... ....|+|+||+.++..  +++++|+++
T Consensus        78 ~~V~~~~vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~-~~~~G~~aey~~v~~~~~~l~~vP~~~  155 (393)
T TIGR02819        78 RDVEFIKIGDIVSVPFNI-ACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDM-GGWVGGQSEYVMVPYADFNLLKFPDRD  155 (393)
T ss_pred             CccccccCCCEEEEeccc-CCCCChHHHCcCcccCcCCCCCCccceeccccc-CCCCCceEEEEEechhhCceEECCCcc
Confidence            999999999999877655 7999999999999999974311    1111110 1246999999999963  799999987


Q ss_pred             Cc----ccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE
Q 021300          157 PL----DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF  232 (314)
Q Consensus       157 ~~----~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~  232 (314)
                      +.    ++++.+.+++.++|+++.. .++++|++|||.|+|++|++++|+|+.+|++++++.+..+++.++++++|++.+
T Consensus       156 ~~~~~~~~~a~l~~~~~ta~~a~~~-~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v  234 (393)
T TIGR02819       156 QALEKIRDLTMLSDIFPTGYHGAVT-AGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETV  234 (393)
T ss_pred             cccccccceeeeccHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeEE
Confidence            53    3456778889999999875 458999999999899999999999999999866655444455577789999864


Q ss_pred             ecCCCH---HHHHHHcC--CccEEEEccCCc--------------ccHHHHHHhhccCCEEEEEcCC
Q 021300          233 LVSRDQ---DEMQAAMG--TMDGIIDTVSAV--------------HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       233 v~~~~~---~~~~~~~~--~~d~v~d~~g~~--------------~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      ....+.   +.+.++++  ++|++||++|..              .++..++++++++|+++.+|.+
T Consensus       235 ~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~  301 (393)
T TIGR02819       235 DLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLY  301 (393)
T ss_pred             ecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeec
Confidence            433332   33445543  699999999986              3699999999999999999986

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=3.1e-40  Score=303.66  Aligned_cols=264  Identities=28%  Similarity=0.411  Sum_probs=223.8

Q ss_pred             cceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcC-CCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEecccccCC
Q 021300           25 LSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE-WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSC  103 (314)
Q Consensus        25 ~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c  103 (314)
                      ++++++|.|++.++||+|||.++|+|++|++.+.+. .....+|.++|||++|+|+++|+++..+ +||+|++.+.. +|
T Consensus        11 ~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~-~c   88 (349)
T TIGR03201        11 MVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVI-PC   88 (349)
T ss_pred             ceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCC-CC
Confidence            788899999999999999999999999999877443 3234678999999999999999999887 99999876655 99


Q ss_pred             CCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCC------CCCcccccccchhhhhhhhhhHh
Q 021300          104 RSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE------GTPLDATAPLLCAGITVYSPLRF  177 (314)
Q Consensus       104 ~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~------~~~~~~aa~~~~~~~ta~~~l~~  177 (314)
                      ++|.+|++|++|+|.+..+.       |....|+|+||+.++.+.++++|+      ++++++++.+++.+.++|+++..
T Consensus        89 g~c~~c~~g~~~~c~~~~~~-------g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~~  161 (349)
T TIGR03201        89 GECELCKTGRGTICRAQKMP-------GNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQ  161 (349)
T ss_pred             CCChhhhCcCcccCCCCCcc-------CcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHHh
Confidence            99999999999999875331       223469999999999999999999      89999999899999999999876


Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH---HH---HHHHcC--Ccc
Q 021300          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ---DE---MQAAMG--TMD  249 (314)
Q Consensus       178 ~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~---~~---~~~~~~--~~d  249 (314)
                       ..+++|++|+|+|+|++|++++|+|+..|++++++++++++++ +++++|++.++++.+.   +.   ++++++  ++|
T Consensus       162 -~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~~~~~~-~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d  239 (349)
T TIGR03201       162 -AGLKKGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPEKLE-MMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLR  239 (349)
T ss_pred             -cCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHH-HHHHhCCceEecCccccHHHHHHHHHhhcccCCCC
Confidence             4589999999999999999999999999999988888887775 5578999998887553   22   333333  565


Q ss_pred             ----EEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300          250 ----GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       250 ----~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~  299 (314)
                          .+||++|+...+..++++++++|+++.+|.+..+..++..+++.+++++.
T Consensus       240 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  293 (349)
T TIGR03201       240 STGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARAL  293 (349)
T ss_pred             CCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEE
Confidence                89999998877888999999999999999877667778788877777766

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=3.7e-40  Score=275.04  Aligned_cols=256  Identities=25%  Similarity=0.307  Sum_probs=228.5

Q ss_pred             CcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCC
Q 021300            7 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS   86 (314)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   86 (314)
                      .|...+.+++...++.+.+++++.|+|+|.|+|++||-.|+|+|..|..+++|-+...+.|+++|.|++|+|+++|++++
T Consensus         5 ~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvt   84 (336)
T KOG1197|consen    5 SPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVT   84 (336)
T ss_pred             CCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCcc
Confidence            35556778888889999999999999999999999999999999999999999887678999999999999999999999


Q ss_pred             CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccch
Q 021300           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC  166 (314)
Q Consensus        87 ~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~  166 (314)
                      ++++||||+..                                   ...|.|+|+..+|...++++|+.+++++||++..
T Consensus        85 drkvGDrVayl-----------------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~ll  129 (336)
T KOG1197|consen   85 DRKVGDRVAYL-----------------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLL  129 (336)
T ss_pred             ccccccEEEEe-----------------------------------ccchhhheeccccceeeccCCcccCHHHHHHHHH
Confidence            99999999852                                   3679999999999999999999999999999999


Q ss_pred             hhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHH-
Q 021300          167 AGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA-  244 (314)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~-  244 (314)
                      ...|||.-+++...+++|++|||+.+ |++|++++|+++..|+++|.++...+++ +++++.|+++.++++..|.+++. 
T Consensus       130 q~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~-~~akenG~~h~I~y~~eD~v~~V~  208 (336)
T KOG1197|consen  130 QGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKH-EIAKENGAEHPIDYSTEDYVDEVK  208 (336)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHH-HHHHhcCCcceeeccchhHHHHHH
Confidence            99999999999999999999999975 9999999999999999999999988877 56688999999999998766654 


Q ss_pred             --cC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEe
Q 021300          245 --MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDS  299 (314)
Q Consensus       245 --~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~  299 (314)
                        ++  ++|+++|.+|... +...+.+|++.|++|.+|..++ .-.++...+--+.+++.
T Consensus       209 kiTngKGVd~vyDsvG~dt-~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lv  267 (336)
T KOG1197|consen  209 KITNGKGVDAVYDSVGKDT-FAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLV  267 (336)
T ss_pred             hccCCCCceeeeccccchh-hHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhc
Confidence              43  7999999999884 9999999999999999998765 34666666555555543

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=5.1e-39  Score=293.67  Aligned_cols=280  Identities=36%  Similarity=0.633  Sum_probs=239.5

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      ||++++...+  +.+++++++.|+++++||+||+.++++|++|...+.|..+....|.++|||++|+|+++|++++++++
T Consensus         1 m~a~~~~~~~--~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~   78 (333)
T cd08296           1 YKAVQVTEPG--GPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKV   78 (333)
T ss_pred             CeEEEEccCC--CCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCC
Confidence            6777776542  35888999999999999999999999999999988886644466889999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  170 (314)
                      ||+|++.+...+|++|.+|..|.++.|......       +....|++++|+.++...++++|+++++++++.+++.+.+
T Consensus        79 Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~-------~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~t  151 (333)
T cd08296          79 GDRVGVGWHGGHCGTCDACRRGDFVHCENGKVT-------GVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVT  151 (333)
T ss_pred             CCEEEeccccCCCCCChhhhCcCcccCCCCCcc-------CcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHH
Confidence            999988777779999999999999999875421       2234689999999999999999999999999999999999


Q ss_pred             hhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHc--CCc
Q 021300          171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM--GTM  248 (314)
Q Consensus       171 a~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~--~~~  248 (314)
                      +|+++... .+.+|++|||+|+|++|++++++|+.+|++++++++++++.+.+ +++|++.++++...+....+.  .++
T Consensus       152 a~~~~~~~-~~~~~~~vlV~g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~  229 (333)
T cd08296         152 TFNALRNS-GAKPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKADLA-RKLGAHHYIDTSKEDVAEALQELGGA  229 (333)
T ss_pred             HHHHHHhc-CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHcCCcEEecCCCccHHHHHHhcCCC
Confidence            99999776 68999999999999999999999999999999998887776544 889999998887654332221  479


Q ss_pred             cEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300          249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       249 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~  301 (314)
                      |+++|++|....+..++++++++|+++.+|......+++...++.+++++.++
T Consensus       230 d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~  282 (333)
T cd08296         230 KLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGW  282 (333)
T ss_pred             CEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEe
Confidence            99999997666789999999999999999987766677777778888888754

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-39  Score=296.25  Aligned_cols=275  Identities=25%  Similarity=0.375  Sum_probs=221.2

Q ss_pred             ccchhhhccCCCCccceeeeeecCC-CCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ||++++..+   ..+++.+.+.|+| .++||+|||.++++|++|...+..... ..+|.++|||++|+|+++|+++++|+
T Consensus         1 Mka~~~~~~---~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~   76 (347)
T PRK10309          1 MKSVVNDTD---GIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA-HYYPITLGHEFSGYVEAVGSGVDDLH   76 (347)
T ss_pred             CceEEEeCC---CceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC-CCCCcccccceEEEEEEeCCCCCCCC
Confidence            677777653   3488899999998 599999999999999999875432111 24688999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||+|++.+.. +|++|.+|.+|.++.|.+..+.       +....|+|+||+.++++.++++|+++++++++.+. .+.
T Consensus        77 vGd~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~  147 (347)
T PRK10309         77 PGDAVACVPLL-PCFTCPECLRGFYSLCAKYDFI-------GSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PIT  147 (347)
T ss_pred             CCCEEEECCCc-CCCCCcchhCcCcccCCCccee-------ccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHH
Confidence            99999877666 7999999999999999864321       23457999999999999999999999999988663 345


Q ss_pred             hhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCH--HHHHHHcC
Q 021300          170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQ--DEMQAAMG  246 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~--~~~~~~~~  246 (314)
                      ++++++.. ..+++|++|||+|+|++|++++|+|+.+|++ +++++++++++ ++++++|++.++++++.  +.+.+...
T Consensus       148 ~~~~~~~~-~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~-~~~~~~Ga~~~i~~~~~~~~~~~~~~~  225 (347)
T PRK10309        148 VGLHAFHL-AQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKL-ALAKSLGAMQTFNSREMSAPQIQSVLR  225 (347)
T ss_pred             HHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHHHcCCceEecCcccCHHHHHHHhc
Confidence            57777644 4578999999999999999999999999997 56666776666 45688999998887653  33344432


Q ss_pred             --Ccc-EEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccch---hhhhcCceeEee
Q 021300          247 --TMD-GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA---FSLLMGEEEDSW  300 (314)
Q Consensus       247 --~~d-~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~---~~~~~~~~~i~~  300 (314)
                        ++| ++|||+|+...+..++++++++|+++.+|.+.++..++.   ..+..+++++.+
T Consensus       226 ~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g  285 (347)
T PRK10309        226 ELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIG  285 (347)
T ss_pred             CCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEE
Confidence              688 999999987778999999999999999998765444432   356778888874

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.4e-38  Score=291.25  Aligned_cols=278  Identities=60%  Similarity=1.060  Sum_probs=242.9

Q ss_pred             CCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEecccc
Q 021300           21 TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMV  100 (314)
Q Consensus        21 ~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~  100 (314)
                      ....+++++++.|+|.++||+|||.++++|++|++.+.+.+...++|.++|||++|+|+++|+++++|++||+|++.+..
T Consensus         8 ~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~   87 (337)
T cd05283           8 ASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQV   87 (337)
T ss_pred             CCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCEEEEecCC
Confidence            34669999999999999999999999999999999988876555678999999999999999999999999999877777


Q ss_pred             cCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhcCC
Q 021300          101 GSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL  180 (314)
Q Consensus       101 ~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~  180 (314)
                      ..|++|.+|..|.+|+|+.....+++....+....|+|++|+.++.+.++++|+++++++++.+++...+||+++.... 
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~-  166 (337)
T cd05283          88 DSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKRNG-  166 (337)
T ss_pred             CCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHHHhcC-
Confidence            7999999999999999999876665555445566899999999999999999999999999999999999999998776 


Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      +++|++++|.|+|.+|++++++++..|++++++++++++...+ +++|++.+++.+..+......+++|++||++|....
T Consensus       167 ~~~g~~vlV~g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~d~v~~~~g~~~~  245 (337)
T cd05283         167 VGPGKRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKEDA-LKLGADEFIATKDPEAMKKAAGSLDLIIDTVSASHD  245 (337)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHcCCcEEecCcchhhhhhccCCceEEEECCCCcch
Confidence            7999999998889999999999999999999998887777555 789999988887765555555689999999998755


Q ss_pred             HHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       261 ~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                      ...++++++++|+++.+|.......++...++.+++++..
T Consensus       246 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~  285 (337)
T cd05283         246 LDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAG  285 (337)
T ss_pred             HHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEE
Confidence            8999999999999999998766556777777778888774

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=2.1e-39  Score=297.17  Aligned_cols=259  Identities=19%  Similarity=0.180  Sum_probs=205.7

Q ss_pred             CCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC----CCCCCcccccccEEEEEeCCCCCCCCCCCEEEe
Q 021300           21 TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN----TIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV   96 (314)
Q Consensus        21 ~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~----~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~   96 (314)
                      +|+.+++++++.|+ +++||||||+++|||++|++++.|.+..    ..+|.++|||++|+|+++|.+  +|++||||++
T Consensus        10 ~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~~vGdrV~~   86 (341)
T cd08237          10 RPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TYKVGTKVVM   86 (341)
T ss_pred             ccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--ccCCCCEEEE
Confidence            45679999999995 9999999999999999999999886532    357999999999999998764  7999999988


Q ss_pred             cccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhH
Q 021300           97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLR  176 (314)
Q Consensus        97 ~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~  176 (314)
                      .+.. +|+ |..|  +..|+|.+..+.       +....|+|+||+.+++++++++|+++++++|+ +..++.++|+++.
T Consensus        87 ~~~~-~~~-~~~~--~~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~~~~~a~~a~~  154 (341)
T cd08237          87 VPNT-PVE-KDEI--IPENYLPSSRFR-------SSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTELVSVGVHAIS  154 (341)
T ss_pred             CCCC-Cch-hccc--chhccCCCccee-------EecCCCceEEEEEEchHHeEECCCCCChHHhh-hhchHHHHHHHHH
Confidence            7665 477 4455  456888765432       12246999999999999999999999998876 4457888899886


Q ss_pred             hc--CCCCCCCEEEEEcCChHHHHHHHHHHH-CC-CeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEE
Q 021300          177 FY--GLDKPGMHVGVVGLGGLGHVAVKFAKA-MG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII  252 (314)
Q Consensus       177 ~~--~~~~~g~~vlI~Gag~vG~~a~~~a~~-~g-~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~  252 (314)
                      ..  ..+++|++|||+|+|++|++++|+++. .| .+++++++++++++. +++++++..++    +.. + ..++|++|
T Consensus       155 ~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~-a~~~~~~~~~~----~~~-~-~~g~d~vi  227 (341)
T cd08237         155 RFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDL-FSFADETYLID----DIP-E-DLAVDHAF  227 (341)
T ss_pred             HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHH-HhhcCceeehh----hhh-h-ccCCcEEE
Confidence            43  236899999999999999999999986 55 578888888776644 45666654321    111 1 12699999


Q ss_pred             EccCC---cccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300          253 DTVSA---VHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       253 d~~g~---~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~  301 (314)
                      |++|.   ..++..++++++++|+++.+|.+..+.+++..+++.+++++.++
T Consensus       228 D~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~  279 (341)
T cd08237         228 ECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGS  279 (341)
T ss_pred             ECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEe
Confidence            99994   44689999999999999999987666778888888899998843

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=1.3e-38  Score=294.06  Aligned_cols=285  Identities=27%  Similarity=0.343  Sum_probs=232.9

Q ss_pred             cchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCC----
Q 021300           12 NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSK----   87 (314)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~----   87 (314)
                      |++++..++  +.+++++++.|.|.++||+|||.++++|++|+..+.|.++...+|.++|||++|+|+++|+++++    
T Consensus         2 ka~~~~~~~--~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~   79 (361)
T cd08231           2 RAAVLTGPG--KPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAG   79 (361)
T ss_pred             eEEEEcCCC--CCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccC
Confidence            455565544  35889999999999999999999999999999988887653467889999999999999999986    


Q ss_pred             --CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC-ceEECCCCCCccccccc
Q 021300           88 --FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH-FVVRIPEGTPLDATAPL  164 (314)
Q Consensus        88 --~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~-~~~~~p~~~~~~~aa~~  164 (314)
                        |++||+|++.+.+ +|++|.+|+.+.++.|.+..+...+.........|+|++|+.++++ .++++|+++++++++.+
T Consensus        80 ~~~~~Gd~V~~~~~~-~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~  158 (361)
T cd08231          80 EPLKVGDRVTWSVGA-PCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPA  158 (361)
T ss_pred             CccCCCCEEEEcccC-CCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHh
Confidence              9999999876555 8999999999999999886532111100011246999999999986 79999999999999888


Q ss_pred             chhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHH----
Q 021300          165 LCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD----  239 (314)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~----  239 (314)
                      ++++.|||+++......++|++|||+|+|.+|++++++|+.+|+ +++++++++++. .+++++|++.++++++.+    
T Consensus       159 ~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~  237 (361)
T cd08231         159 NCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERL-ELAREFGADATIDIDELPDPQR  237 (361)
T ss_pred             cCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHHcCCCeEEcCcccccHHH
Confidence            89999999999888876799999999999999999999999999 888888777666 455789999888776431    


Q ss_pred             --HHHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC--CcccchhhhhcCceeEee
Q 021300          240 --EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       240 --~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~--~~~~~~~~~~~~~~~i~~  300 (314)
                        .+.+..+  ++|++||++|+...+..+++.++++|+++.+|....  ..+++...++.++.++.+
T Consensus       238 ~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  304 (361)
T cd08231         238 RAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIG  304 (361)
T ss_pred             HHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEE
Confidence              3444443  699999999876668899999999999999997643  345555566778888764

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=2.9e-39  Score=274.21  Aligned_cols=275  Identities=23%  Similarity=0.316  Sum_probs=242.2

Q ss_pred             CCCCCCcccccchhhhccCCC-CccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEE
Q 021300            2 GQAPEQEHPKNAFGWAAKDTS-GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVT   79 (314)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~   79 (314)
                      |++..++..-++++|+.++.| +.+++.++++|.....+|+||..|+.|||+|++.++|.|+. +.+|.+-|.|++|.|+
T Consensus        11 ssa~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv   90 (354)
T KOG0025|consen   11 SSASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVV   90 (354)
T ss_pred             ccccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEE
Confidence            456678888999999999886 67888999999998889999999999999999999999984 5789999999999999


Q ss_pred             EeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcc
Q 021300           80 EVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLD  159 (314)
Q Consensus        80 ~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~  159 (314)
                      .+|+++++|++||+|+..                                  ....|+|++|.+.+++.++++++.++.+
T Consensus        91 ~vGs~vkgfk~Gd~VIp~----------------------------------~a~lGtW~t~~v~~e~~Li~vd~~~pl~  136 (354)
T KOG0025|consen   91 AVGSNVKGFKPGDWVIPL----------------------------------SANLGTWRTEAVFSESDLIKVDKDIPLA  136 (354)
T ss_pred             EecCCcCccCCCCeEeec----------------------------------CCCCccceeeEeecccceEEcCCcCChh
Confidence            999999999999999753                                  2467999999999999999999999999


Q ss_pred             cccccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHH---HHHcCCcEEecC
Q 021300          160 ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGADSFLVS  235 (314)
Q Consensus       160 ~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~---~~~~ga~~~v~~  235 (314)
                      .||++.++..|||++|...-++++||+|+-.|+ +.+|.+.+|+||++|.+.+-++|+.+..+++   ++.+||+.++..
T Consensus       137 ~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTe  216 (354)
T KOG0025|consen  137 SAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITE  216 (354)
T ss_pred             hhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecH
Confidence            999999999999999999999999999988898 9999999999999999999999987766555   456799998764


Q ss_pred             CCH---HHHHHH--cCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC-CCcccchhhhhcCceeEe-eeccccccC
Q 021300          236 RDQ---DEMQAA--MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGEEEDS-WWQHDWGDE  308 (314)
Q Consensus       236 ~~~---~~~~~~--~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~i~-~~~~~~~~~  308 (314)
                      .+-   +..+..  .....+.|+|+|+.. .....+.|.+||+.+.+|.++ .|+.++...++++++.+. ||++.|..+
T Consensus       217 eel~~~~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~  295 (354)
T KOG0025|consen  217 EELRDRKMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKE  295 (354)
T ss_pred             HHhcchhhhhhhccCCCceEEEeccCchh-HHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhc
Confidence            432   121111  226899999999986 889999999999999998776 799999999999999998 999999988


Q ss_pred             CCC
Q 021300          309 GDS  311 (314)
Q Consensus       309 ~~~  311 (314)
                      ..+
T Consensus       296 ~~~  298 (354)
T KOG0025|consen  296 HKS  298 (354)
T ss_pred             cCC
Confidence            754

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=3.4e-38  Score=290.22  Aligned_cols=278  Identities=29%  Similarity=0.408  Sum_probs=229.7

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcC-CCC----------CCCCCcccccccEEEE
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE-WGN----------TIYPIVPGHEIVGVVT   79 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~-~~~----------~~~p~~~G~e~~G~V~   79 (314)
                      ||++++..   ++.+++++++.|+|+++||+||+.++++|++|+....+. ...          ..+|.++|||++|+|+
T Consensus         1 mka~~~~~---~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~   77 (351)
T cd08233           1 MKAARYHG---RKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVV   77 (351)
T ss_pred             CceEEEec---CCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEE
Confidence            67777754   345889999999999999999999999999998765432 110          1368899999999999


Q ss_pred             EeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcc
Q 021300           80 EVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLD  159 (314)
Q Consensus        80 ~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~  159 (314)
                      ++|+++++|++||+|+..+.. +|++|.+|++|.++.|++..+  .+.    ....|+|++|+.++...++++|++++++
T Consensus        78 ~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~g~~a~~~~~~~~~~~~lP~~~~~~  150 (351)
T cd08233          78 EVGSGVTGFKVGDRVVVEPTI-KCGTCGACKRGLYNLCDSLGF--IGL----GGGGGGFAEYVVVPAYHVHKLPDNVPLE  150 (351)
T ss_pred             EeCCCCCCCCCCCEEEECCCC-CCCCChHHhCcCcccCCCCce--ecc----CCCCCceeeEEEechHHeEECcCCCCHH
Confidence            999999999999999876544 899999999999999987532  110    0126899999999999999999999999


Q ss_pred             cccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCH
Q 021300          160 ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQ  238 (314)
Q Consensus       160 ~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~  238 (314)
                      +++.+ ....+||+++. ...+++|++|+|+|+|.+|++++|+|+.+|+ +++++++++++. ++++++|++.++++++.
T Consensus       151 ~aa~~-~~~~ta~~~l~-~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~-~~~~~~ga~~~i~~~~~  227 (351)
T cd08233         151 EAALV-EPLAVAWHAVR-RSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARR-ELAEELGATIVLDPTEV  227 (351)
T ss_pred             Hhhhc-cHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHhCCCEEECCCcc
Confidence            88755 57789999994 5568999999999999999999999999999 777777777666 45578999999988775


Q ss_pred             HH---HHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300          239 DE---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       239 ~~---~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~  301 (314)
                      +.   +.+..+  ++|++||++|....+..++++++++|+++.+|....+.+++...++.+++++.+.
T Consensus       228 ~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~  295 (351)
T cd08233         228 DVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGS  295 (351)
T ss_pred             CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEE
Confidence            43   333333  5999999999766689999999999999999987766788888888888888743

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=1.2e-37  Score=288.80  Aligned_cols=285  Identities=25%  Similarity=0.354  Sum_probs=227.6

Q ss_pred             ccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 021300            9 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKF   88 (314)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   88 (314)
                      .+||+..+..  +++.++++++|.|++.++||+|||.++++|++|++.+.|.+. ..+|.++|||++|+|+++|++++.+
T Consensus         6 ~~~~a~~~~~--~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~   82 (373)
T cd08299           6 IKCKAAVLWE--PKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTV   82 (373)
T ss_pred             ceeEEEEEec--CCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccC
Confidence            4577766654  444588999999999999999999999999999999888663 3578899999999999999999999


Q ss_pred             CCCCEEEecccccCCCCCccccCCCCCCCCcccccc-cccc-------------CCCCccCcccceEEeecCCceEECCC
Q 021300           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY-ANKY-------------HDGTITYGGYSDIMVADEHFVVRIPE  154 (314)
Q Consensus        89 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~~~~-------------~~~~~~~g~~~~~~~v~~~~~~~~p~  154 (314)
                      ++||+|++.+ ..+|++|.+|++|.++.|+.....- .+..             .......|+|+||+.++.+.++++|+
T Consensus        83 ~~Gd~V~~~~-~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~  161 (373)
T cd08299          83 KPGDKVIPLF-VPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDA  161 (373)
T ss_pred             CCCCEEEECC-CCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCC
Confidence            9999998655 5699999999999999998753210 0100             01111368999999999999999999


Q ss_pred             CCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEe
Q 021300          155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFL  233 (314)
Q Consensus       155 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v  233 (314)
                      ++++++++.+++++.++|+++....++++|++|+|+|+|++|++++++++.+|+ +|+++++++++++.+ +++|++.++
T Consensus       162 ~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~lGa~~~i  240 (373)
T cd08299         162 AAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KELGATECI  240 (373)
T ss_pred             CCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCceEe
Confidence            999999999999999999998777778999999999889999999999999999 788888888777555 789999888


Q ss_pred             cCCCH-----HHHHHHc-CCccEEEEccCCcccHHHHHHhh-ccCCEEEEEcCCCCC--cccchhhhhcCceeEe
Q 021300          234 VSRDQ-----DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLL-KSQGKLVLVGAPEKP--LELPAFSLLMGEEEDS  299 (314)
Q Consensus       234 ~~~~~-----~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l-~~~G~~v~~G~~~~~--~~~~~~~~~~~~~~i~  299 (314)
                      +..+.     ..+.++. +++|+++|++|....+..++..+ +.+|+++.+|.....  .+++...+ .+++++.
T Consensus       241 ~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~  314 (373)
T cd08299         241 NPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLL-LTGRTWK  314 (373)
T ss_pred             cccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHH-hcCCeEE
Confidence            76542     2233333 37999999999766677767665 579999999986543  34443323 3455665

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=3.4e-37  Score=282.12  Aligned_cols=276  Identities=22%  Similarity=0.293  Sum_probs=221.1

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      ||++++..   ++.+++++++.|+|.++||+||+.++++|++|+..+.+.++...+|.++|||++|+|+++|++++.+++
T Consensus         1 m~a~~~~~---~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   77 (339)
T PRK10083          1 MKSIVIEK---PNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARI   77 (339)
T ss_pred             CeEEEEec---CCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCC
Confidence            56666654   446889999999999999999999999999999988887654467899999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  170 (314)
                      ||+|++.+.. +|+.|.+|.+|++++|.+..+.       +....|+|++|+.++...++++|+++++++++ +...+.+
T Consensus        78 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~  148 (339)
T PRK10083         78 GERVAVDPVI-SCGHCYPCSIGKPNVCTSLVVL-------GVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTI  148 (339)
T ss_pred             CCEEEEcccc-CCCCCccccCcCcccCCCCceE-------EEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHH
Confidence            9999877665 6999999999999999865321       12246899999999999999999999998876 5567778


Q ss_pred             hhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHH-CCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcC---
Q 021300          171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG---  246 (314)
Q Consensus       171 a~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~-~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~---  246 (314)
                      +|.+.. ...+++|++|+|+|+|++|++++|+++. +|+++++++...+.+.++++++|++.++++++.+....+.+   
T Consensus       149 a~~~~~-~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~g~  227 (339)
T PRK10083        149 AANVTG-RTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEKGI  227 (339)
T ss_pred             HHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhcCCC
Confidence            886554 4558999999999999999999999996 69975554444444557778999999998876544333332   


Q ss_pred             CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300          247 TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       247 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~  299 (314)
                      ++|++||++|....+..++++++++|+++.+|..+.+..++...+..+.+++.
T Consensus       228 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  280 (339)
T PRK10083        228 KPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIF  280 (339)
T ss_pred             CCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEE
Confidence            46799999997666899999999999999999765444444444444555544

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=6.4e-37  Score=283.24  Aligned_cols=285  Identities=27%  Similarity=0.407  Sum_probs=232.5

Q ss_pred             cccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      +||++++...+  ..+++++.+.|++.++||+|||.++++|++|+....+.++ ..+|.++|+|++|+|+++|+++..++
T Consensus         2 ~~~a~~~~~~~--~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~   78 (365)
T cd08278           2 KTTAAVVREPG--GPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLK   78 (365)
T ss_pred             ccEEeeeccCC--CcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCC
Confidence            47888776633  3478899999999999999999999999999998887665 45688999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccc-cccccCCC---------------CccCcccceEEeecCCceEECC
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT-YANKYHDG---------------TITYGGYSDIMVADEHFVVRIP  153 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~~~~~~~---------------~~~~g~~~~~~~v~~~~~~~~p  153 (314)
                      +||+|++.+ . .|+.|.+|..|..++|.+.... +.+...++               ....|+|++|+.++...++++|
T Consensus        79 ~Gd~V~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP  156 (365)
T cd08278          79 PGDHVVLSF-A-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVD  156 (365)
T ss_pred             CCCEEEEcc-c-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECC
Confidence            999998754 3 8999999999999999875421 11111000               1235899999999999999999


Q ss_pred             CCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEE
Q 021300          154 EGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSF  232 (314)
Q Consensus       154 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~  232 (314)
                      +++++++++.+++.+.||+.++.....+++|++|||+|+|.+|++++|+|+.+|++ ++++++++++. ++.+++|++.+
T Consensus       157 ~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~-~~~~~~g~~~~  235 (365)
T cd08278         157 KDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRL-ELAKELGATHV  235 (365)
T ss_pred             CCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHHHHcCCcEE
Confidence            99999999999999999999987777789999999998899999999999999995 66666665554 66688999998


Q ss_pred             ecCCCHH---HHHHHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC--CCcccchhhhhcCceeEee
Q 021300          233 LVSRDQD---EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE--KPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       233 v~~~~~~---~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~--~~~~~~~~~~~~~~~~i~~  300 (314)
                      +++++.+   .+.+.. .++|+++|++|+...+..++++++++|+++.+|...  ....++...++.++.++.+
T Consensus       236 i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  309 (365)
T cd08278         236 INPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRG  309 (365)
T ss_pred             ecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEE
Confidence            8876643   333333 479999999997667899999999999999999753  3456777666667777763

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=9e-37  Score=280.77  Aligned_cols=262  Identities=21%  Similarity=0.260  Sum_probs=217.8

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      |+++++..++   .+++.+.+.|.+.++||+|||.++++|++|++.+.+.+.....|.++|||++|+|+++|++++++++
T Consensus         1 mka~~~~~~~---~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~   77 (351)
T cd08285           1 MKAFAMLGIG---KVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKP   77 (351)
T ss_pred             CceEEEccCC---ccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCC
Confidence            6778886643   3778889999999999999999999999999888776554466899999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC--ceEECCCCCCcccccccchhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCAG  168 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~  168 (314)
                      ||+|+..+.. +|++|..|..|.++.|.+...+    +..+....|+|++|+.++..  .++++|+++++++++.++..+
T Consensus        78 Gd~V~~~~~~-~~~~c~~c~~g~~~~~~~~~~~----~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~  152 (351)
T cd08285          78 GDRVIVPAIT-PDWRSVAAQRGYPSQSGGMLGG----WKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMM  152 (351)
T ss_pred             CCEEEEcCcC-CCCCCHHHHCcCcccCcCCCCC----ccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccch
Confidence            9999876554 8999999999999999875311    11123457999999999874  899999999999999998999


Q ss_pred             hhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHH
Q 021300          169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAA  244 (314)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~  244 (314)
                      .|+|+++.. ..+++|++|||+|+|++|++++|+|+.+|+. ++++++.+++ .++++++|++.++++++.+.   +...
T Consensus       153 ~ta~~~~~~-~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~-~~~~~~~g~~~~v~~~~~~~~~~i~~~  230 (351)
T cd08285         153 STGFHGAEL-ANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNR-VELAKEYGATDIVDYKNGDVVEQILKL  230 (351)
T ss_pred             hhHHHHHHc-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHH-HHHHHHcCCceEecCCCCCHHHHHHHH
Confidence            999999754 4589999999998899999999999999995 5555566544 57778899999988766433   3333


Q ss_pred             c--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300          245 M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       245 ~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      .  .++|+++|++|+...+..++++++++|+++.+|....
T Consensus       231 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  270 (351)
T cd08285         231 TGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGE  270 (351)
T ss_pred             hCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCC
Confidence            3  3699999999986668999999999999999998764

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=2.8e-36  Score=278.95  Aligned_cols=274  Identities=26%  Similarity=0.380  Sum_probs=223.9

Q ss_pred             CCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEeccccc
Q 021300           22 SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVG  101 (314)
Q Consensus        22 ~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~  101 (314)
                      +..+++++++.|.+.+++|+||+.++++|+.|++.+.+.+. ..+|.++|||++|+|+++|++++.+++||+|++.+.. 
T Consensus        10 ~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~-   87 (365)
T cd05279          10 GKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFGP-   87 (365)
T ss_pred             CCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCCEEEEcCCC-
Confidence            33488999999999999999999999999999998887654 3567899999999999999999999999999876654 


Q ss_pred             CCCCCccccCCCCCCCCccccc-cccccCC-------------CCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300          102 SCRSCDSCAIDLENYCPKVIMT-YANKYHD-------------GTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (314)
Q Consensus       102 ~c~~c~~c~~g~~~~c~~~~~~-~~~~~~~-------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~  167 (314)
                      .|++|.+|.+|.+++|.+..+. .+|....             .....|+|++|+.++.+.++++|+++++++++.++++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~  167 (365)
T cd05279          88 QCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCG  167 (365)
T ss_pred             CCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHHHhhHhccc
Confidence            8999999999999999886432 1121111             1123579999999999999999999999999999999


Q ss_pred             hhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCH--HH---H
Q 021300          168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQ--DE---M  241 (314)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~--~~---~  241 (314)
                      +.++|+++.....+++|+++||+|+|++|++++++|+.+|++ ++++++++++. ++++++|++.+++.++.  +.   +
T Consensus       168 ~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~-~~~~~~g~~~~v~~~~~~~~~~~~l  246 (365)
T cd05279         168 FSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKF-EKAKQLGATECINPRDQDKPIVEVL  246 (365)
T ss_pred             hhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHHHHhCCCeecccccccchHHHHH
Confidence            999999987777789999999998899999999999999997 44555566555 55588999988887654  32   3


Q ss_pred             HHHc-CCccEEEEccCCcccHHHHHHhhc-cCCEEEEEcCCC--CCcccchhhhhcCceeEe
Q 021300          242 QAAM-GTMDGIIDTVSAVHPLMPLIGLLK-SQGKLVLVGAPE--KPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       242 ~~~~-~~~d~v~d~~g~~~~~~~~~~~l~-~~G~~v~~G~~~--~~~~~~~~~~~~~~~~i~  299 (314)
                      .++. +++|+++|++|....+..++++++ ++|+++.+|...  ....++...+ .+..++.
T Consensus       247 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~  307 (365)
T cd05279         247 TEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIK  307 (365)
T ss_pred             HHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEE
Confidence            3333 479999999987566899999999 999999999754  4567777776 5566665

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=3.4e-36  Score=275.28  Aligned_cols=278  Identities=27%  Similarity=0.498  Sum_probs=231.5

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      ||++++...+..  .++++.+.|.+.++||+|||.++++|++|+..+.+.++. ..|.++|||++|+|+++|++++.|++
T Consensus         1 mka~~~~~~~~~--~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~   77 (338)
T PRK09422          1 MKAAVVNKDHTG--DVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKV   77 (338)
T ss_pred             CeEEEecCCCCC--ceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCC
Confidence            677777654332  227889999999999999999999999999888776542 34678999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  170 (314)
                      ||+|++.+.+.+|+.|.+|..+..++|.+....       +....|++++|+.++...++++|+++++++++.+++...|
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~t  150 (338)
T PRK09422         78 GDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNA-------GYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVT  150 (338)
T ss_pred             CCEEEEccCCCCCCCChhhcCCCcccCCCcccc-------CccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhH
Confidence            999998888889999999999999999876421       2345799999999999999999999999999999999999


Q ss_pred             hhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHH-CCCeEEEEeCChhhHHHHHHHcCCcEEecCCC-H---HHHHHHc
Q 021300          171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAIERLGADSFLVSRD-Q---DEMQAAM  245 (314)
Q Consensus       171 a~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~-~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~-~---~~~~~~~  245 (314)
                      ||+++. ...+++|++|||+|+|++|++++++++. .|++++++++++++++.+ +++|++.+++++. .   +.+.+..
T Consensus       151 a~~~~~-~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~v~~~~  228 (338)
T PRK09422        151 TYKAIK-VSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALA-KEVGADLTINSKRVEDVAKIIQEKT  228 (338)
T ss_pred             HHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHH-HHcCCcEEecccccccHHHHHHHhc
Confidence            999984 4558999999999999999999999998 499999999988877666 7899999888754 2   3444555


Q ss_pred             CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       246 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                      +++|.++++.++...+..++++++++|+++.+|.......++...+..+..++.+
T Consensus       229 ~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  283 (338)
T PRK09422        229 GGAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVG  283 (338)
T ss_pred             CCCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEE
Confidence            6789665555555569999999999999999997655556666666667777653

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.3e-36  Score=273.01  Aligned_cols=280  Identities=28%  Similarity=0.401  Sum_probs=233.0

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      ||+++... ..+..+++++++.|.+++++|+|||.++++|+.|+..+.+.+.....|.++|+|++|+|+++|++++.|++
T Consensus         1 ~~~~~~~~-~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   79 (306)
T cd08258           1 MKALVKTG-PGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKV   79 (306)
T ss_pred             CeeEEEec-CCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCC
Confidence            45666654 34466889999999999999999999999999999888776533345789999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  170 (314)
                      ||+|+..+.+++|+.|..|.++.++.|+.... +      +....|+|++|+.++...++++|+++++++++ ++....+
T Consensus        80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~  151 (306)
T cd08258          80 GDRVVSETTFSTCGRCPYCRRGDYNLCPHRKG-I------GTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAV  151 (306)
T ss_pred             CCEEEEccCcCCCCCCcchhCcCcccCCCCce-e------eecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHH
Confidence            99999888888999999999999999987421 1      23456899999999999999999999999886 7778889


Q ss_pred             hhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC-ChhhHHHHHHHcCCcEEecCCCHHH---HHHHc-
Q 021300          171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSFLVSRDQDE---MQAAM-  245 (314)
Q Consensus       171 a~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~-~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~-  245 (314)
                      +|+++.....+++|++|||.|+|.+|.+++++|+..|++++++.+ +.++..++++++|++.+ ++...+.   +.+.. 
T Consensus       152 a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~  230 (306)
T cd08258         152 AVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITD  230 (306)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcC
Confidence            999987777789999999988899999999999999999877643 33444567788999877 7665443   33333 


Q ss_pred             -CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC-CCcccchhhhhcCceeEee
Q 021300          246 -GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       246 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~i~~  300 (314)
                       .++|+++|++|....+...++.|+++|+++.+|... .+..++...++.+++++.+
T Consensus       231 ~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g  287 (306)
T cd08258         231 GDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIG  287 (306)
T ss_pred             CCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEE
Confidence             369999999986656889999999999999999876 3567788888889999883

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=5.6e-36  Score=274.08  Aligned_cols=277  Identities=34%  Similarity=0.498  Sum_probs=232.4

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG---NTIYPIVPGHEIVGVVTEVGSKVSK   87 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~   87 (314)
                      ||++++...+  ..+++.+.+.|++.+++|+||+.++++|+.|+..+.+.+.   ...+|.++|+|++|+|+++|+++.+
T Consensus         1 ~ka~~~~~~~--~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~   78 (340)
T cd05284           1 MKAARLYEYG--KPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDG   78 (340)
T ss_pred             CeeeEeccCC--CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCc
Confidence            6777777643  3477888999999999999999999999999998877654   2356789999999999999999999


Q ss_pred             CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (314)
Q Consensus        88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~  167 (314)
                      +++||+|+..+.. +|+.|..|..|..++|++..+.       +....|+|++|+.++.+.++++|+++++++++.+++.
T Consensus        79 ~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~  150 (340)
T cd05284          79 LKEGDPVVVHPPW-GCGTCRYCRRGEENYCENARFP-------GIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADA  150 (340)
T ss_pred             CcCCCEEEEcCCC-CCCCChHHhCcCcccCCCCccc-------CccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcch
Confidence            9999999876665 8999999999999999987642       2345799999999999999999999999999999999


Q ss_pred             hhhhhhhhHhc-CCCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCcEEecCCCH--HHHHH
Q 021300          168 GITVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQ--DEMQA  243 (314)
Q Consensus       168 ~~ta~~~l~~~-~~~~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~--~~~~~  243 (314)
                      +.|||+++... ..+.+|++|||+|+|.+|++++++|+..| .+++++++++++.+.+ +++|++.+++++..  +.+.+
T Consensus       151 ~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~  229 (340)
T cd05284         151 GLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLA-ERLGADHVLNASDDVVEEVRE  229 (340)
T ss_pred             HHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHH-HHhCCcEEEcCCccHHHHHHH
Confidence            99999999776 45789999999999889999999999999 7999888888777555 78999998887764  33334


Q ss_pred             HcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300          244 AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       244 ~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~  299 (314)
                      ..+  ++|+++|++|+...+..++++++++|+++.+|..+. ..++....+.++.++.
T Consensus       230 ~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~  286 (340)
T cd05284         230 LTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVI  286 (340)
T ss_pred             HhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEE
Confidence            443  699999999975568999999999999999997654 4455555455666665

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=3.4e-36  Score=268.60  Aligned_cols=228  Identities=26%  Similarity=0.329  Sum_probs=189.6

Q ss_pred             cccccccEEEEEeCCCCC------CCCCCCEEEecccccCCCCCccccCCCCCCCCcccccccccc--CCCCccCcccce
Q 021300           69 VPGHEIVGVVTEVGSKVS------KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY--HDGTITYGGYSD  140 (314)
Q Consensus        69 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~--~~~~~~~g~~~~  140 (314)
                      ++|||++|+|+++|++++      ++++||||++.+.. +|++|.+|..|++|+|++....  |..  ..+....|+|+|
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~--g~~~~~~~~~~~G~~ae   77 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTV-PCGRCFRCRRGLPQKCDSLRKY--GHEALDSGWPLSGGYAE   77 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCC-CCCCChhhhCcCcccCCChhhc--CcccccCCcccccccee
Confidence            589999999999999999      89999999876654 8999999999999999875432  111  012235799999


Q ss_pred             EEeecCC-ceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChh
Q 021300          141 IMVADEH-FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPS  218 (314)
Q Consensus       141 ~~~v~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~  218 (314)
                      |+.+++. .++++|+++++++++++++.+.|+|+++++.. ..+|++|||+|+|++|++++|+||.+|++ +++++++++
T Consensus        78 y~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~-~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~  156 (280)
T TIGR03366        78 HCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAG-DLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPD  156 (280)
T ss_pred             eEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhcc-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence            9999987 79999999999999999999999999997766 47999999999999999999999999997 766655655


Q ss_pred             hHHHHHHHcCCcEEecCCCH-HHHHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC--CCcccchhhhhc
Q 021300          219 KKSEAIERLGADSFLVSRDQ-DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE--KPLELPAFSLLM  293 (314)
Q Consensus       219 ~~~~~~~~~ga~~~v~~~~~-~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~--~~~~~~~~~~~~  293 (314)
                      + .++++++|++.+++..+. +.+.+++.  ++|++||++|....+..++++++++|+++.+|...  .+.+++...++.
T Consensus       157 r-~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~  235 (280)
T TIGR03366       157 R-RELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVR  235 (280)
T ss_pred             H-HHHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHh
Confidence            4 477789999998876553 33444443  69999999998877899999999999999999753  356788889999


Q ss_pred             CceeEeee
Q 021300          294 GEEEDSWW  301 (314)
Q Consensus       294 ~~~~i~~~  301 (314)
                      +++++.++
T Consensus       236 ~~~~i~g~  243 (280)
T TIGR03366       236 RWLTIRGV  243 (280)
T ss_pred             CCcEEEec
Confidence            99998843

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=2.9e-36  Score=272.64  Aligned_cols=247  Identities=21%  Similarity=0.249  Sum_probs=192.8

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccC-hhhhhhHhcCCCC---CCCCCcccccccEEEEEeCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGIC-HSDLHMIKNEWGN---TIYPIVPGHEIVGVVTEVGSKVS   86 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~-~~d~~~~~~~~~~---~~~p~~~G~e~~G~V~~vG~~v~   86 (314)
                      |+++++.   +++.+++++++.|+|+++||||||.+++|| ++|.+.+.|.++.   ..+|.++|||++|+|+++|+++ 
T Consensus         2 ~ka~~~~---~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-   77 (308)
T TIGR01202         2 TQAIVLS---GPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-   77 (308)
T ss_pred             ceEEEEe---CCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-
Confidence            5666664   355689999999999999999999999996 6999888886542   3579999999999999999998 


Q ss_pred             CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccch
Q 021300           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC  166 (314)
Q Consensus        87 ~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~  166 (314)
                      +|++||||++.     |..|..|..                     ...|+|+||+.++++.++++|++++++. +.+. 
T Consensus        78 ~~~vGdrV~~~-----~~~c~~~~~---------------------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-  129 (308)
T TIGR01202        78 GFRPGDRVFVP-----GSNCYEDVR---------------------GLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-  129 (308)
T ss_pred             CCCCCCEEEEe-----Ccccccccc---------------------ccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-
Confidence            69999999752     333332211                     1258999999999999999999998865 4443 


Q ss_pred             hhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEe-CChhhHHHHHHHcCCcEEecCCCHHHHHHHc
Q 021300          167 AGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAIERLGADSFLVSRDQDEMQAAM  245 (314)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~-~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~  245 (314)
                      ...+||+++.+..  .++++++|+|+|++|++++|+|+.+|++++++. +.++++ +.++.   ..++++.+.     ..
T Consensus       130 ~~~~a~~~~~~~~--~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl-~~a~~---~~~i~~~~~-----~~  198 (308)
T TIGR01202       130 LAATARHAVAGAE--VKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRR-DGATG---YEVLDPEKD-----PR  198 (308)
T ss_pred             HHHHHHHHHHhcc--cCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH-Hhhhh---ccccChhhc-----cC
Confidence            4689999997642  468999999999999999999999999755544 444433 33232   334443321     23


Q ss_pred             CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       246 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                      .++|++||++|+...+..++++++++|+++.+|.+.++.+++...++.+++++.+
T Consensus       199 ~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~  253 (308)
T TIGR01202       199 RDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRI  253 (308)
T ss_pred             CCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEE
Confidence            4799999999997678999999999999999998776677888888888888774

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=2.1e-35  Score=275.70  Aligned_cols=286  Identities=20%  Similarity=0.246  Sum_probs=230.6

Q ss_pred             CCcccccchhhhc--cCCC-CccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCC----------CCCCCCCcccc
Q 021300            6 EQEHPKNAFGWAA--KDTS-GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW----------GNTIYPIVPGH   72 (314)
Q Consensus         6 ~~~~~~~~~~~~~--~~~~-~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~----------~~~~~p~~~G~   72 (314)
                      -.|.+|+++++..  ++.+ ..+++++++.|.++++||+|||.+++||++|++.+.+..          +....+.++||
T Consensus         8 ~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~   87 (393)
T cd08246           8 VVPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGS   87 (393)
T ss_pred             cCchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCcccccc
Confidence            4677899988753  2333 357888999999999999999999999999988776641          11112358999


Q ss_pred             cccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEEC
Q 021300           73 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI  152 (314)
Q Consensus        73 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~  152 (314)
                      |++|+|+++|++++.+++||+|++.+.. .|+.|..|.+|..++|+...+  +|.    ....|+|++|+.++...++++
T Consensus        88 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~c~~~~~~~~~~~~~--~g~----~~~~g~~a~y~~v~~~~l~~i  160 (393)
T cd08246          88 DASGIVWAVGEGVKNWKVGDEVVVHCSV-WDGNDPERAGGDPMFDPSQRI--WGY----ETNYGSFAQFALVQATQLMPK  160 (393)
T ss_pred             ceEEEEEEeCCCCCcCCCCCEEEEeccc-cccCccccccccccccccccc--ccc----cCCCCcceeEEEechHHeEEC
Confidence            9999999999999999999999876554 799999999999999986432  221    124699999999999999999


Q ss_pred             CCCCCcccccccchhhhhhhhhhHhc--CCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC
Q 021300          153 PEGTPLDATAPLLCAGITVYSPLRFY--GLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA  229 (314)
Q Consensus       153 p~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga  229 (314)
                      |+++++++++.+++.+.|||+++...  .++++|++++|+|+ |++|++++++++.+|++++++++++++.+ +++++|+
T Consensus       161 P~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~-~~~~~G~  239 (393)
T cd08246         161 PKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAE-YCRALGA  239 (393)
T ss_pred             CCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHH-HHHHcCC
Confidence            99999999999999999999998754  56899999999997 99999999999999999988888877765 4467999


Q ss_pred             cEEecCCCH-------------------------HHHHHHcC---CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          230 DSFLVSRDQ-------------------------DEMQAAMG---TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       230 ~~~v~~~~~-------------------------~~~~~~~~---~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      +.+++++..                         ..+.++.+   ++|++||++|+. .+..++++++++|+++.+|...
T Consensus       240 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~  318 (393)
T cd08246         240 EGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA-TFPTSVFVCDRGGMVVICAGTT  318 (393)
T ss_pred             CEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH-hHHHHHHHhccCCEEEEEcccC
Confidence            988876331                         12333433   699999999985 5899999999999999998754


Q ss_pred             C-CcccchhhhhcCceeEee
Q 021300          282 K-PLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       282 ~-~~~~~~~~~~~~~~~i~~  300 (314)
                      . +..++...++.+++++.+
T Consensus       319 ~~~~~~~~~~l~~~~~~i~g  338 (393)
T cd08246         319 GYNHTYDNRYLWMRQKRIQG  338 (393)
T ss_pred             CCCCCCcHHHHhhheeEEEe
Confidence            3 345666667777777653

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=2.7e-35  Score=272.24  Aligned_cols=284  Identities=26%  Similarity=0.403  Sum_probs=232.1

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      ||++.+...+.  .+++++++.|++.++||+|||.++++|+.|+..+.+.++ ..+|.++|+|++|+|+++|++++.+++
T Consensus         1 m~a~~~~~~~~--~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~   77 (363)
T cd08279           1 MRAAVLHEVGK--PLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKP   77 (363)
T ss_pred             CeEEEEecCCC--CceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCC
Confidence            67888876543  478889999999999999999999999999998887665 356789999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccc-------------cccCCCCccCcccceEEeecCCceEECCCCCC
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-------------NKYHDGTITYGGYSDIMVADEHFVVRIPEGTP  157 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~-------------~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~  157 (314)
                      ||+|+..+ .++|++|.+|.+++.++|.+..+..+             |.........|+|++|+.++.+.++++|++++
T Consensus        78 Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~  156 (363)
T cd08279          78 GDHVVLSW-IPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIP  156 (363)
T ss_pred             CCEEEECC-CCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCC
Confidence            99997654 44999999999999999987532111             11111113468999999999999999999999


Q ss_pred             cccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCC
Q 021300          158 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSR  236 (314)
Q Consensus       158 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~  236 (314)
                      +++++.+++.+.+||.++.....+++|+++||+|+|.+|++++++++..|++ ++++++++++.+ +.+++|++.+++++
T Consensus       157 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~-~~~~~g~~~vv~~~  235 (363)
T cd08279         157 LDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLE-LARRFGATHTVNAS  235 (363)
T ss_pred             hHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHH-HHHHhCCeEEeCCC
Confidence            9999999999999999987777789999999998899999999999999996 777777776664 55789999988877


Q ss_pred             CHH---HHHHHc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC--CCcccchhhhhcCceeEe
Q 021300          237 DQD---EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE--KPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       237 ~~~---~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~--~~~~~~~~~~~~~~~~i~  299 (314)
                      ..+   .+.+..  +++|+++|+++....+...+++++++|+++.+|...  ....++..++..+.+.+.
T Consensus       236 ~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  305 (363)
T cd08279         236 EDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQ  305 (363)
T ss_pred             CccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEE
Confidence            643   333443  369999999996656899999999999999998764  345667766665555544

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=2.6e-35  Score=274.44  Aligned_cols=284  Identities=24%  Similarity=0.280  Sum_probs=225.9

Q ss_pred             ccchhhhccCCCCccceeeeeecCCC-CCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATG-EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~-~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      |+++.+.   +++.+++.+++.|.|. +++|+||+.++++|++|...+.|.++..++|.++|||++|+|+++|+++++++
T Consensus         1 m~a~~~~---~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   77 (386)
T cd08283           1 MKALVWH---GKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLK   77 (386)
T ss_pred             CeeEEEe---cCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCC
Confidence            6677764   3466889999999984 99999999999999999999988776556789999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccc--cc--------cccCC---CCccCcccceEEeecCC--ceEECCC
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT--YA--------NKYHD---GTITYGGYSDIMVADEH--FVVRIPE  154 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~--~~--------~~~~~---~~~~~g~~~~~~~v~~~--~~~~~p~  154 (314)
                      +||+|++.+.. +||+|.+|+.+.+++|++....  +.        +....   .....|+|++|+.++.+  .++++|+
T Consensus        78 ~Gd~V~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~  156 (386)
T cd08283          78 VGDRVVVPFTI-ACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPD  156 (386)
T ss_pred             CCCEEEEcCcC-CCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCC
Confidence            99999876665 6999999999999999875221  00        11100   01236899999999987  8999999


Q ss_pred             CCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEe
Q 021300          155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFL  233 (314)
Q Consensus       155 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v  233 (314)
                      ++++++++.++....+||+++ ....+.+|++|||+|+|++|++++++|+..|+ +++++++++++. +++++++...++
T Consensus       157 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~-~~~~~~~~~~vi  234 (386)
T cd08283         157 DLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERL-EMARSHLGAETI  234 (386)
T ss_pred             CCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHHHcCCcEEE
Confidence            999999999999999999999 55668999999999889999999999999998 588887887766 455667433566


Q ss_pred             cCCCHH-H---HHHHcC--CccEEEEccCCc---------------------ccHHHHHHhhccCCEEEEEcCCCC-Ccc
Q 021300          234 VSRDQD-E---MQAAMG--TMDGIIDTVSAV---------------------HPLMPLIGLLKSQGKLVLVGAPEK-PLE  285 (314)
Q Consensus       234 ~~~~~~-~---~~~~~~--~~d~v~d~~g~~---------------------~~~~~~~~~l~~~G~~v~~G~~~~-~~~  285 (314)
                      ++...+ .   +.+...  ++|++||++|+.                     ..+..++++++++|+++.+|..+. ...
T Consensus       235 ~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~  314 (386)
T cd08283         235 NFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNK  314 (386)
T ss_pred             cCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCc
Confidence            665542 3   333333  699999999753                     247889999999999999997654 344


Q ss_pred             cchhhhhcCceeEee
Q 021300          286 LPAFSLLMGEEEDSW  300 (314)
Q Consensus       286 ~~~~~~~~~~~~i~~  300 (314)
                      ++...++.++.++..
T Consensus       315 ~~~~~~~~~~~~i~~  329 (386)
T cd08283         315 FPIGAAMNKGLTLRM  329 (386)
T ss_pred             cCHHHHHhCCcEEEe
Confidence            555556667776663

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.5e-35  Score=269.52  Aligned_cols=278  Identities=28%  Similarity=0.420  Sum_probs=233.1

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      ||++++..++.+  +++.+.+.|.+.+++|+||+.+++||+.|+..+.+..+...+|.++|+|++|+|+++|++++.+++
T Consensus         1 m~a~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~   78 (345)
T cd08260           1 MRAAVYEEFGEP--LEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRV   78 (345)
T ss_pred             CeeEEEecCCCC--cEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCC
Confidence            788888765443  888899999999999999999999999999988887665567889999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC--ceEECCCCCCcccccccchhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCAG  168 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~  168 (314)
                      ||+|+. +...+|++|.+|..|..++|.+....       +....|+|++|+.++..  .++++|++++.++++.+++..
T Consensus        79 Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~  150 (345)
T cd08260          79 GDRVTV-PFVLGCGTCPYCRAGDSNVCEHQVQP-------GFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRF  150 (345)
T ss_pred             CCEEEE-CCCCCCCCCccccCcCcccCCCCccc-------ccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccch
Confidence            999976 55568999999999999999985321       22236899999999974  999999999999999999999


Q ss_pred             hhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCC-HHH---HHHH
Q 021300          169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-QDE---MQAA  244 (314)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~-~~~---~~~~  244 (314)
                      .+||+++....++.++++++|+|+|.+|++++++|+..|++++++++++++.+.+ +++|++.+++.+. .+.   +.+.
T Consensus       151 ~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~  229 (345)
T cd08260         151 ATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGARVIAVDIDDDKLELA-RELGAVATVNASEVEDVAAAVRDL  229 (345)
T ss_pred             HHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHhCCCEEEccccchhHHHHHHHH
Confidence            9999998766778999999999999999999999999999999998988887666 6799999988876 433   2233


Q ss_pred             c-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC---cccchhhhhcCceeEe
Q 021300          245 M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP---LELPAFSLLMGEEEDS  299 (314)
Q Consensus       245 ~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~---~~~~~~~~~~~~~~i~  299 (314)
                      . +++|++||++|+...+...+++++++|+++.+|.....   ..++...++.++..+.
T Consensus       230 ~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~  288 (345)
T cd08260         230 TGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIV  288 (345)
T ss_pred             hCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEE
Confidence            3 37999999998655688899999999999999976532   3555555556666665

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=2.1e-35  Score=270.99  Aligned_cols=279  Identities=24%  Similarity=0.364  Sum_probs=225.3

Q ss_pred             ccchhhhccCCCCccceeeeeecCC-CCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ||++.+..   ++.+++.+++.|.| .++||+|||.++++|+.|+..+.+.++..+.|.++|+|++|+|+++|+++++++
T Consensus         1 ~ka~~~~~---~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~   77 (347)
T cd05278           1 MKALVYLG---PGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLK   77 (347)
T ss_pred             CceEEEec---CCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccC
Confidence            56666654   33478889999999 999999999999999999998888776567789999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC--ceEECCCCCCcccccccchh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCA  167 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~  167 (314)
                      +||+|+.. ..++|+.|.+|.+|...+|++..+...    .+....|+|++|+.++.+  .++++|+++++++++.+++.
T Consensus        78 ~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~  152 (347)
T cd05278          78 PGDRVSVP-CITFCGRCRFCRRGYHAHCENGLWGWK----LGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDI  152 (347)
T ss_pred             CCCEEEec-CCCCCCCChhHhCcCcccCcCCCcccc----cccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcch
Confidence            99999865 445999999999999999988543221    122357899999999987  99999999999999999999


Q ss_pred             hhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHH
Q 021300          168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQA  243 (314)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~  243 (314)
                      +.|||+++ ...++++|++|||.|+|.+|++++|+|+.+|. +++++.+++++. ++++++|++.+++++..+.   +..
T Consensus       153 ~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~i~~  230 (347)
T cd05278         153 LPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERL-DLAKEAGATDIINPKNGDIVEQILE  230 (347)
T ss_pred             hhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHH-HHHHHhCCcEEEcCCcchHHHHHHH
Confidence            99999998 45668999999998889999999999999997 777776665444 5667899999888776543   333


Q ss_pred             Hc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccch-hhhhcCceeEe
Q 021300          244 AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA-FSLLMGEEEDS  299 (314)
Q Consensus       244 ~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~-~~~~~~~~~i~  299 (314)
                      ..  +++|++||+++....+..++++|+++|+++.+|.......... ...+.+++.+.
T Consensus       231 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  289 (347)
T cd05278         231 LTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFK  289 (347)
T ss_pred             HcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEE
Confidence            33  3699999999875468999999999999999987654322212 22234555555

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.4e-35  Score=271.20  Aligned_cols=278  Identities=19%  Similarity=0.250  Sum_probs=219.6

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC---------CCCCCcccccccEEEEEe
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN---------TIYPIVPGHEIVGVVTEV   81 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~---------~~~p~~~G~e~~G~V~~v   81 (314)
                      ||++++.   +++.+++++.+.|++.+++|+||+.++++|+.|+..+.|....         .++|.++|+|++|+|+++
T Consensus         1 mka~~~~---~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~v   77 (350)
T cd08256           1 MRAVVCH---GPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVEL   77 (350)
T ss_pred             CeeEEEe---cCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEe
Confidence            6777774   3445889999999999999999999999999999888775311         146778999999999999


Q ss_pred             CCCCC--CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC-ceEECCCCCCc
Q 021300           82 GSKVS--KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH-FVVRIPEGTPL  158 (314)
Q Consensus        82 G~~v~--~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~-~~~~~p~~~~~  158 (314)
                      |+.++  +|++||+|+..+ ..+|++|..|++|..++|....+  ++.   .....|+|++|+.++++ .++++|+++++
T Consensus        78 G~~v~~~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~g~---~~~~~g~~~~~~~~~~~~~~~~lP~~~~~  151 (350)
T cd08256          78 GEGAEERGVKVGDRVISEQ-IVPCWNCRFCNRGQYWMCQKHDL--YGF---QNNVNGGMAEYMRFPKEAIVHKVPDDIPP  151 (350)
T ss_pred             CCCcccCCCCCCCEEEECC-cCCCCCChHHhCcCcccCcCccc--eee---ccCCCCcceeeEEcccccceEECCCCCCH
Confidence            99999  899999997654 44999999999999999975432  221   11256899999999987 67899999999


Q ss_pred             ccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH
Q 021300          159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ  238 (314)
Q Consensus       159 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~  238 (314)
                      ++++.+ .++.++|+++ ....+++|++|+|.|+|.+|++++++|+.+|++++++++..+++.++.+++|++.+++++..
T Consensus       152 ~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~  229 (350)
T cd08256         152 EDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEV  229 (350)
T ss_pred             HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCc
Confidence            998877 8889999998 45568999999997789999999999999998655444444444577788999988887653


Q ss_pred             ---HHHHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhh-hcCceeEe
Q 021300          239 ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSL-LMGEEEDS  299 (314)
Q Consensus       239 ---~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~-~~~~~~i~  299 (314)
                         +.+.+..+  ++|++||++|+...+..++++++++|+++.+|.......++...+ ..+++.+.
T Consensus       230 ~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~  296 (350)
T cd08256         230 DVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVL  296 (350)
T ss_pred             CHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEE
Confidence               33444443  599999999975568889999999999999997655445444433 23444444

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=2.6e-35  Score=270.37  Aligned_cols=279  Identities=27%  Similarity=0.359  Sum_probs=230.6

Q ss_pred             ccchhhhccCCCCccceeeeeecCC-CCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      |+++++...   +.+++++++.|+| .++||+|||+++++|+.|+.++.|.++...+|.++|||++|+|+++|+++++++
T Consensus         1 m~a~~~~~~---~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~   77 (345)
T cd08286           1 MKALVYHGP---GKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFK   77 (345)
T ss_pred             CceEEEecC---CceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccC
Confidence            567776543   3488899999986 899999999999999999999988766555688999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC--ceEECCCCCCcccccccchh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCA  167 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~  167 (314)
                      +||+|++.+.. .|++|.+|..+.++.|....+.      .+....|++++|+.++..  .++++|++++.++++.+++.
T Consensus        78 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~  150 (345)
T cd08286          78 VGDRVLISCIS-SCGTCGYCRKGLYSHCESGGWI------LGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDI  150 (345)
T ss_pred             CCCEEEECCcC-CCCCChHHHCcCcccCCCcccc------cccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccch
Confidence            99999876555 7999999999999999875432      123456899999999987  89999999999999999999


Q ss_pred             hhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHH
Q 021300          168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQA  243 (314)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~  243 (314)
                      +.+||.++.....+.+|+++||+|+|.+|.+++|+++.+| .+++++++++.+ ..+.+++|++.++++...+.   +.+
T Consensus       151 ~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~-~~~~~~~g~~~~v~~~~~~~~~~i~~  229 (345)
T cd08286         151 LPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNR-LEVAKKLGATHTVNSAKGDAIEQVLE  229 (345)
T ss_pred             hHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHH-HHHHHHhCCCceeccccccHHHHHHH
Confidence            9999998766667899999999988999999999999999 688776666555 45667899999888775433   233


Q ss_pred             HcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          244 AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       244 ~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                      ...  ++|++||++|....+..+++.++++|+++.+|....+..++...++.+++++..
T Consensus       230 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~  288 (345)
T cd08286         230 LTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITT  288 (345)
T ss_pred             HhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEe
Confidence            332  699999999876668889999999999999997655566666666667777753

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.5e-35  Score=267.22  Aligned_cols=272  Identities=26%  Similarity=0.375  Sum_probs=224.9

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      |+++++...+ ...+++++.+.|+++++||+||+.++++|++|+..+.+ .....+|.++|||++|+|+++|++++.+++
T Consensus         1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~-~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~   78 (325)
T cd08264           1 MKALVFEKSG-IENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINA-VKVKPMPHIPGAEFAGVVEEVGDHVKGVKK   78 (325)
T ss_pred             CeeEEeccCC-CCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhC-CCCCCCCeecccceeEEEEEECCCCCCCCC
Confidence            5677775533 56688888888889999999999999999999887764 222245778999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  170 (314)
                      ||+|++.+.. +|+.|++|..|.++.|.+..+.       +....|+|++|+.++...++++|+++++++++.+++.+.+
T Consensus        79 Gd~V~~~~~~-~~~~c~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~  150 (325)
T cd08264          79 GDRVVVYNRV-FDGTCDMCLSGNEMLCRNGGII-------GVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALT  150 (325)
T ss_pred             CCEEEECCCc-CCCCChhhcCCCccccCcccee-------eccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHH
Confidence            9999887766 8999999999999999875321       2335789999999999999999999999999999999999


Q ss_pred             hhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH-HHHHHHcCCc
Q 021300          171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-DEMQAAMGTM  248 (314)
Q Consensus       171 a~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~-~~~~~~~~~~  248 (314)
                      ||+++.. .++++|++++|+|+ |++|++++++|+.+|++++++++    . +..+++|++.+++.++. +.+.++.+++
T Consensus       151 a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~-~~~~~~g~~~~~~~~~~~~~l~~~~~~~  224 (325)
T cd08264         151 AYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----K-DWLKEFGADEVVDYDEVEEKVKEITKMA  224 (325)
T ss_pred             HHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----H-HHHHHhCCCeeecchHHHHHHHHHhCCC
Confidence            9999976 56899999999998 99999999999999999888763    2 34477999888877642 3344444789


Q ss_pred             cEEEEccCCcccHHHHHHhhccCCEEEEEcCCC-CCcccchhhhhcCceeEe
Q 021300          249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       249 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~i~  299 (314)
                      |+++|++|+. .+..++++|+++|+++.+|... ....++...+..++.++.
T Consensus       225 d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~  275 (325)
T cd08264         225 DVVINSLGSS-FWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISII  275 (325)
T ss_pred             CEEEECCCHH-HHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEE
Confidence            9999999986 5899999999999999998753 345666666666666655

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=4.7e-35  Score=269.19  Aligned_cols=278  Identities=31%  Similarity=0.460  Sum_probs=228.8

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC------------CCCCCCcccccccEEE
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG------------NTIYPIVPGHEIVGVV   78 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~------------~~~~p~~~G~e~~G~V   78 (314)
                      ||++.+...+  ..+++++.|.|++.++||+||+.++++|++|+..+.+.++            ...+|.++|+|++|+|
T Consensus         1 ~~a~~~~~~~--~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V   78 (350)
T cd08240           1 MKAAAVVEPG--KPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEV   78 (350)
T ss_pred             CeeEEeccCC--CCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEE
Confidence            6677666543  3378889999999999999999999999999998877543            1245678999999999


Q ss_pred             EEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCc
Q 021300           79 TEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPL  158 (314)
Q Consensus        79 ~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~  158 (314)
                      +++|++++++++||+|+..+.. .|++|..|.++.++.|.+....       +....|++++|+.++.+.++++|+++++
T Consensus        79 ~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~~p~~~s~  150 (350)
T cd08240          79 VAVGPDAADVKVGDKVLVYPWI-GCGECPVCLAGDENLCAKGRAL-------GIFQDGGYAEYVIVPHSRYLVDPGGLDP  150 (350)
T ss_pred             EeeCCCCCCCCCCCEEEECCcC-CCCCChHHHCcCcccCCCCCce-------eeeccCcceeeEEecHHHeeeCCCCCCH
Confidence            9999999999999999877666 8999999999999999764211       2235689999999999999999999999


Q ss_pred             ccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCC
Q 021300          159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRD  237 (314)
Q Consensus       159 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~  237 (314)
                      ++++.+++.+.|||+++.....+++|++|+|+|+|++|++++|+|+..|+ ++++++.++++.. ..+++|++.+++.++
T Consensus       151 ~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~-~~~~~g~~~~~~~~~  229 (350)
T cd08240         151 ALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLE-AAKAAGADVVVNGSD  229 (350)
T ss_pred             HHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHH-HHHHhCCcEEecCCC
Confidence            99999999999999999888767789999999889999999999999999 6777777766664 447899988888765


Q ss_pred             HH---HHHHHcC-CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300          238 QD---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       238 ~~---~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~  299 (314)
                      .+   .+.+..+ ++|++||++|....+..++++|+++|+++.+|.......++...+..++.++.
T Consensus       230 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~  295 (350)
T cd08240         230 PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQ  295 (350)
T ss_pred             ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEE
Confidence            43   3333333 79999999997667899999999999999999876544455544555666665

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-35  Score=267.29  Aligned_cols=274  Identities=27%  Similarity=0.389  Sum_probs=226.7

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      |+++++...+  +.+++++.+.|.+.++|++||+.++++|+.|+....+.++...+|.++|+|++|+|+++|++++.+++
T Consensus         1 m~a~~~~~~~--~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~   78 (334)
T PRK13771          1 MKAVILPGFK--QGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKP   78 (334)
T ss_pred             CeeEEEcCCC--CCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCC
Confidence            6677766543  34888999999999999999999999999999888776654566789999999999999999989999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  170 (314)
                      ||+|++.+. .+|++|++|..|.++.|+.....       +....|+|++|+.++...++++|+++++++++.+++.+.+
T Consensus        79 G~~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~  150 (334)
T PRK13771         79 GDRVASLLY-APDGTCEYCRSGEEAYCKNRLGY-------GEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGM  150 (334)
T ss_pred             CCEEEECCC-CCCcCChhhcCCCcccCcccccc-------ccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHH
Confidence            999987655 49999999999999999885431       2335799999999999999999999999999999999999


Q ss_pred             hhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH-HHHHHHcCCc
Q 021300          171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-DEMQAAMGTM  248 (314)
Q Consensus       171 a~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~-~~~~~~~~~~  248 (314)
                      +|+++... .++++++++|+|+ |.+|++++++++..|++++++++++++.+.+ +++ ++.+++.++. +.+.+. +++
T Consensus       151 a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~v~~~-~~~  226 (334)
T PRK13771        151 VYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV-SKY-ADYVIVGSKFSEEVKKI-GGA  226 (334)
T ss_pred             HHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHH-HHHhcCchhHHHHHHhc-CCC
Confidence            99999877 6899999999998 9999999999999999999999988877655 667 7666665421 223333 479


Q ss_pred             cEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCc--ccchhhhhcCceeEe
Q 021300          249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL--ELPAFSLLMGEEEDS  299 (314)
Q Consensus       249 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~--~~~~~~~~~~~~~i~  299 (314)
                      |+++|++|+.. ...+++.++++|+++.+|......  .++...+..+++++.
T Consensus       227 d~~ld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  278 (334)
T PRK13771        227 DIVIETVGTPT-LEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEII  278 (334)
T ss_pred             cEEEEcCChHH-HHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEE
Confidence            99999999874 889999999999999999764322  244444455666665

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=1.6e-34  Score=263.90  Aligned_cols=279  Identities=34%  Similarity=0.483  Sum_probs=235.3

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ||++.+..++++. +.+.+.+.|.+.+++|+||+.++++|+.|.....+.+. ...+|.++|+|++|+|+++|++++.++
T Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~   79 (338)
T cd08254           1 MKAWRFHKGSKGL-LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFK   79 (338)
T ss_pred             CeeEEEecCCCCc-eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCC
Confidence            6778887766665 67788899999999999999999999999998887665 235678899999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||+|+..+.+ +|+.|++|..++.++|......       +....|++++|+.++.+.++++|+++++++++.++..+.
T Consensus        80 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~  151 (338)
T cd08254          80 VGDRVAVPAVI-PCGACALCRRGRGNLCLNQGMP-------GLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVL  151 (338)
T ss_pred             CCCEEEECCCC-CCCCChhhhCcCcccCCCCCcc-------ccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHH
Confidence            99999876654 8999999999999999654221       334578999999999999999999999999999999999


Q ss_pred             hhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHH--HHc--
Q 021300          170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ--AAM--  245 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~--~~~--  245 (314)
                      +||+++.....+++++++||.|+|.+|++++++|+..|++++++++++++.+.+ +++|++.+++..+.+...  ...  
T Consensus       152 ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~  230 (338)
T cd08254         152 TPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLELA-KELGADEVLNSLDDSPKDKKAAGLG  230 (338)
T ss_pred             HHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHhCCCEEEcCCCcCHHHHHHHhcC
Confidence            999999888878999999998889999999999999999999888888877655 778998888776542211  222  


Q ss_pred             CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300          246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       246 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~  299 (314)
                      +++|+++|++|....+..++++|+++|+++.+|.......++...+..++.++.
T Consensus       231 ~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  284 (338)
T cd08254         231 GGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRII  284 (338)
T ss_pred             CCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEE
Confidence            369999999987667899999999999999999766556667777777777665

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=1.2e-34  Score=270.94  Aligned_cols=284  Identities=19%  Similarity=0.252  Sum_probs=229.5

Q ss_pred             Ccccccchhhhc--cCCC-CccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCC----------CCCCCC-Ccccc
Q 021300            7 QEHPKNAFGWAA--KDTS-GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW----------GNTIYP-IVPGH   72 (314)
Q Consensus         7 ~~~~~~~~~~~~--~~~~-~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~----------~~~~~p-~~~G~   72 (314)
                      +++.||++.+..  +++| +.+++.+++.|.|.++||+||+.++++|..|.+...+..          +....| .++||
T Consensus         4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~   83 (398)
T TIGR01751         4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS   83 (398)
T ss_pred             cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence            567799999965  5554 568889999999999999999999999999987654432          101223 37999


Q ss_pred             cccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEEC
Q 021300           73 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI  152 (314)
Q Consensus        73 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~  152 (314)
                      |++|+|+++|++++.+++||+|++.+.. +|++|.+|..|.+++|+...+  .|.    ....|+|++|+.++...++++
T Consensus        84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~g~----~~~~g~~ae~~~v~~~~~~~v  156 (398)
T TIGR01751        84 DASGVVWRVGPGVTRWKVGDEVVASCLQ-VDLTAPDGRVGDPMLSSEQRI--WGY----ETNFGSFAEFALVKDYQLMPK  156 (398)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEEcccc-ccCCchhhccCcccccccccc--ccc----cCCCccceEEEEechHHeEEC
Confidence            9999999999999999999999866544 899999999999999976432  111    124789999999999999999


Q ss_pred             CCCCCcccccccchhhhhhhhhhHh--cCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC
Q 021300          153 PEGTPLDATAPLLCAGITVYSPLRF--YGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA  229 (314)
Q Consensus       153 p~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga  229 (314)
                      |+++++++++.+++...+||+++..  ...+.+|++++|+|+ |.+|++++++++.+|++++++++++++.+ .++++|+
T Consensus       157 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~-~~~~~g~  235 (398)
T TIGR01751       157 PKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAE-YCRELGA  235 (398)
T ss_pred             CCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHH-HHHHcCC
Confidence            9999999999999999999999865  455789999999998 99999999999999999988887776664 4467999


Q ss_pred             cEEecCCCHH-------------------------HHHHHc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300          230 DSFLVSRDQD-------------------------EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       230 ~~~v~~~~~~-------------------------~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      +.++++++.+                         .+.+..  +++|++|||+|.. .+..++++++++|+++.+|....
T Consensus       236 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~  314 (398)
T TIGR01751       236 EAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRA-TFPTSVFVCRRGGMVVICGGTTG  314 (398)
T ss_pred             CEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHhhccCCEEEEEccccC
Confidence            9988865421                         122233  2699999999975 48899999999999999998654


Q ss_pred             -CcccchhhhhcCceeEe
Q 021300          283 -PLELPAFSLLMGEEEDS  299 (314)
Q Consensus       283 -~~~~~~~~~~~~~~~i~  299 (314)
                       +..++...+..+++.+.
T Consensus       315 ~~~~~~~~~~~~~~~~~~  332 (398)
T TIGR01751       315 YNHDYDNRYLWMRQKRIQ  332 (398)
T ss_pred             CCCCcCHHHHhhcccEEE
Confidence             35566666666776665

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.2e-34  Score=263.75  Aligned_cols=280  Identities=33%  Similarity=0.561  Sum_probs=236.6

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ||++++..++ +..+++.+++.|.+.++||+||+.++++|+.|..++.+.++. ...|.++|+|++|+|+++|++++.++
T Consensus         1 m~a~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~   79 (341)
T cd08297           1 MKAAVVEEFG-EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLK   79 (341)
T ss_pred             CceEEeeccC-CCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCC
Confidence            7888887655 557889999999999999999999999999999888776542 24567899999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||+|+..+...+|+.|++|..+..+.|+.....       +....|++++|+.++.+.++++|+++++++++.++....
T Consensus        80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~  152 (341)
T cd08297          80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS-------GYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGV  152 (341)
T ss_pred             CCCEEEEecCCCCCCCCccccCCCcccCCCcccc-------ccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchH
Confidence            9999988777779999999999999999875321       234568999999999999999999999999999999999


Q ss_pred             hhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHHc
Q 021300          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAM  245 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~  245 (314)
                      |||+++... .+++++++||+|+ +.+|++++++|+.+|++++++++++++.+.+ +++|++.++++++.+.   +.+..
T Consensus       153 ta~~~~~~~-~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~  230 (341)
T cd08297         153 TVYKALKKA-GLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KELGADAFVDFKKSDDVEAVKELT  230 (341)
T ss_pred             HHHHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCcEEEcCCCccHHHHHHHHh
Confidence            999998775 5899999999997 7799999999999999999999998877655 7899999888876533   33443


Q ss_pred             --CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-cccchhhhhcCceeEee
Q 021300          246 --GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGEEEDSW  300 (314)
Q Consensus       246 --~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~~~~~~~~~~~~~~i~~  300 (314)
                        +++|+++|+.+.......++++++++|+++.+|..+.. .+++...++.++.++.+
T Consensus       231 ~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  288 (341)
T cd08297         231 GGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVG  288 (341)
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEE
Confidence              36999999887666789999999999999999976542 36666666677777763

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=1.4e-34  Score=265.06  Aligned_cols=276  Identities=23%  Similarity=0.329  Sum_probs=221.5

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCC---CCCCCCCcccccccEEEEEeCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW---GNTIYPIVPGHEIVGVVTEVGSKVSK   87 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~v~~   87 (314)
                      ||++++..  .+..+++.+++.|+|.++||+||++++++|++|+.++.+..   ....+|.++|||++|+|+++|++++.
T Consensus         1 ~~~~~~~~--~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~   78 (341)
T PRK05396          1 MKALVKLK--AEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTG   78 (341)
T ss_pred             CceEEEec--CCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCc
Confidence            56676654  33568999999999999999999999999999998765531   12346789999999999999999999


Q ss_pred             CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (314)
Q Consensus        88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~  167 (314)
                      +++||+|+..+.. +|++|.+|..+.+|+|+...+.       +...+|+|++|+.++.+.++++|+++++++++. ...
T Consensus        79 ~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~-~~~  149 (341)
T PRK05396         79 FKVGDRVSGEGHI-VCGHCRNCRAGRRHLCRNTKGV-------GVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAI-FDP  149 (341)
T ss_pred             CCCCCEEEECCCC-CCCCChhhhCcChhhCCCccee-------eecCCCcceeeEEechHHeEECcCCCCHHHhHh-hhH
Confidence            9999999877555 8999999999999999875321       233579999999999999999999999988874 355


Q ss_pred             hhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHH
Q 021300          168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQA  243 (314)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~  243 (314)
                      +.++++++..  ...+|++++|.|+|.+|++++|+++.+|+ +++++.+++++ .++.+++|++.++++++.+   .+.+
T Consensus       150 ~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~-~~~~~~lg~~~~~~~~~~~~~~~~~~  226 (341)
T PRK05396        150 FGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYR-LELARKMGATRAVNVAKEDLRDVMAE  226 (341)
T ss_pred             HHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHH-HHHHHHhCCcEEecCccccHHHHHHH
Confidence            5666655433  24689999998889999999999999999 56666555554 4667889999988877643   3333


Q ss_pred             Hc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          244 AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       244 ~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                      ..  +++|++||+.|....+..++++++++|+++.+|..+....++...++.+++++.+
T Consensus       227 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~  285 (341)
T PRK05396        227 LGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKG  285 (341)
T ss_pred             hcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEE
Confidence            43  3799999999987678999999999999999998765555666777778887763

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=3.2e-34  Score=265.10  Aligned_cols=270  Identities=25%  Similarity=0.365  Sum_probs=212.1

Q ss_pred             CCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC---CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEecc
Q 021300           22 SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG---NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC   98 (314)
Q Consensus        22 ~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~   98 (314)
                      ++.+++++.+.|.+.++||+|||.++++|++|+..+.+...   ....|.++|||++|+|+++|+++++|++||+|++.+
T Consensus        26 ~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~  105 (364)
T PLN02702         26 VNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEP  105 (364)
T ss_pred             CCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEcC
Confidence            34578888888999999999999999999999988765321   123577899999999999999999999999998766


Q ss_pred             cccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhc
Q 021300           99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFY  178 (314)
Q Consensus        99 ~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~  178 (314)
                      .+ +|++|..|.+|.++.|++..+  .+    .....|+|++|+.++...++++|+++++++++.. ..+.++|+++ ..
T Consensus       106 ~~-~~~~c~~c~~g~~~~c~~~~~--~~----~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~-~~  176 (364)
T PLN02702        106 GI-SCWRCNLCKEGRYNLCPEMKF--FA----TPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHAC-RR  176 (364)
T ss_pred             CC-CCCCCcchhCcCcccCCCccc--cC----CCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHHH-Hh
Confidence            65 899999999999999987422  11    1124689999999999999999999999888742 2344577777 44


Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCC--CH---HHHHHH----cCCcc
Q 021300          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR--DQ---DEMQAA----MGTMD  249 (314)
Q Consensus       179 ~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~--~~---~~~~~~----~~~~d  249 (314)
                      .++.+|++++|+|+|++|++++++++.+|++.+++++..+.+.++++++|++.+++..  ..   +.+.++    .+++|
T Consensus       177 ~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  256 (364)
T PLN02702        177 ANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGID  256 (364)
T ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCCCCC
Confidence            5589999999998899999999999999996444444444455677889998876542  22   223222    13699


Q ss_pred             EEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       250 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                      ++||++|+...+..++++++++|+++.+|....+..++...+..+++++.+
T Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~  307 (364)
T PLN02702        257 VSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVG  307 (364)
T ss_pred             EEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEE
Confidence            999999976668999999999999999997544455566677777777763

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.6e-34  Score=261.94  Aligned_cols=257  Identities=34%  Similarity=0.549  Sum_probs=220.5

Q ss_pred             ccchhhhccCC--CCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 021300           11 KNAFGWAAKDT--SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKF   88 (314)
Q Consensus        11 ~~~~~~~~~~~--~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   88 (314)
                      |+++++...+.  +..+++++.+.|.+.++||+||+.++++|++|+..+.|.++...+|.++|||++|+|+++|+++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF   80 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence            56677765443  2357777888888999999999999999999999888876555678899999999999999999999


Q ss_pred             CCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhh
Q 021300           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG  168 (314)
Q Consensus        89 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~  168 (314)
                      ++||+|.+.+...+|++|.+|..+.++.|+...+.       +....|+|++|+.++...++++|+++++.+++.+++.+
T Consensus        81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~  153 (329)
T cd08298          81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT-------GYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAG  153 (329)
T ss_pred             cCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc-------ccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhh
Confidence            99999988877789999999999999999877532       22356899999999999999999999999999999999


Q ss_pred             hhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCc
Q 021300          169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM  248 (314)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~  248 (314)
                      .+||+++ ...++++|++++|+|+|++|++++++++..|++++++++++++++.+ +++|++.+++....     ..+++
T Consensus       154 ~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----~~~~v  226 (329)
T cd08298         154 IIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQELA-RELGADWAGDSDDL-----PPEPL  226 (329)
T ss_pred             HHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEcCChHHHHHH-HHhCCcEEeccCcc-----CCCcc
Confidence            9999999 56778999999999999999999999999999999998888777555 78999887766542     12469


Q ss_pred             cEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       249 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      |+++++.+....+..++++++++|+++.+|...
T Consensus       227 D~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~  259 (329)
T cd08298         227 DAAIIFAPVGALVPAALRAVKKGGRVVLAGIHM  259 (329)
T ss_pred             cEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCC
Confidence            999998776667899999999999999988543

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.4e-34  Score=262.13  Aligned_cols=274  Identities=28%  Similarity=0.418  Sum_probs=223.3

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      |+++.+..+   +.+++.+.+.|++.++||+|||.++++|+.|+....+.++...+|.++|+|++|+|+++|++++.|++
T Consensus         1 ~~a~~~~~~---~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~   77 (337)
T cd08261           1 MKALVCEKP---GRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKV   77 (337)
T ss_pred             CeEEEEeCC---CceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCC
Confidence            566666543   45888999999999999999999999999999988876655556789999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  170 (314)
                      ||+|+..+. .+|+.|..|..+++|.|......       +....|+|++|+.++++ ++++|+++++++++.+ ..+.+
T Consensus        78 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~  147 (337)
T cd08261          78 GDRVVVDPY-ISCGECYACRKGRPNCCENLQVL-------GVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAI  147 (337)
T ss_pred             CCEEEECCC-CCCCCChhhhCcCcccCCCCCee-------eecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHH
Confidence            999976544 48999999999999999543211       12246899999999999 9999999999998866 56778


Q ss_pred             hhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHHcC-
Q 021300          171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG-  246 (314)
Q Consensus       171 a~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~~~~-  246 (314)
                      +++++ ....+.+|+++||+|+|.+|.+++|+|+.+|++++++++++++...+ +++|++.++++...+   .+.+..+ 
T Consensus       148 a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~-~~~g~~~v~~~~~~~~~~~l~~~~~~  225 (337)
T cd08261         148 GAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGARVIVVDIDDERLEFA-RELGADDTINVGDEDVAARLRELTDG  225 (337)
T ss_pred             HHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEECCCHHHHHHH-HHhCCCEEecCcccCHHHHHHHHhCC
Confidence            88887 45668999999999889999999999999999999998887777544 789999999887653   3333333 


Q ss_pred             -CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300          247 -TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       247 -~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~  299 (314)
                       ++|+++|++|+...+..++++|+++|+++.+|....+..++...+..+++.+.
T Consensus       226 ~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~  279 (337)
T cd08261         226 EGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTIL  279 (337)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEE
Confidence             59999999987656899999999999999998765544555555555555554

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=6e-34  Score=259.58  Aligned_cols=276  Identities=46%  Similarity=0.791  Sum_probs=228.6

Q ss_pred             chhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCC
Q 021300           13 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD   92 (314)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd   92 (314)
                      ++++..++  ..+++.+.+.|.+.+++|+||+.++++|+.|...+.+.+....+|.++|+|++|+|+++|++++++++||
T Consensus         2 ~~~~~~~~--~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd   79 (330)
T cd08245           2 AAVVHAAG--GPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGD   79 (330)
T ss_pred             eEEEecCC--CCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCC
Confidence            44454432  3588899999999999999999999999999998887665456788999999999999999999999999


Q ss_pred             EEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhh
Q 021300           93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVY  172 (314)
Q Consensus        93 ~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~  172 (314)
                      +|++.+...+|++|.+|.++.++.|++..+.       +....|++++|+.++...++++|+++++++++.+++...+||
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~  152 (330)
T cd08245          80 RVGVGWLVGSCGRCEYCRRGLENLCQKAVNT-------GYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVY  152 (330)
T ss_pred             EEEEccccCCCCCChhhhCcCcccCcCcccc-------CcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHH
Confidence            9987766678999999999999999985432       122468999999999999999999999999999999999999


Q ss_pred             hhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEE
Q 021300          173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII  252 (314)
Q Consensus       173 ~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~  252 (314)
                      .++.. ..+++|+++||+|+|.+|++++++++..|.+++++++++++.+.+ +++|++.+++....+......+++|+++
T Consensus       153 ~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~d~vi  230 (330)
T cd08245         153 SALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGFETVAITRSPDKRELA-RKLGADEVVDSGAELDEQAAAGGADVIL  230 (330)
T ss_pred             HHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhCCcEEeccCCcchHHhccCCCCEEE
Confidence            99976 458999999999888899999999999999999999998887665 7789988887765444333335799999


Q ss_pred             EccCCcccHHHHHHhhccCCEEEEEcCCCCC-cccchhhhhcCceeEe
Q 021300          253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGEEEDS  299 (314)
Q Consensus       253 d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~~~~~~~~~~~~~~i~  299 (314)
                      ++++.......++++++++|+++.+|..... ..+...+++.++.++.
T Consensus       231 ~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~  278 (330)
T cd08245         231 VTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIA  278 (330)
T ss_pred             ECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEE
Confidence            9988766789999999999999999875432 2333445555666664

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=2.3e-34  Score=270.05  Aligned_cols=266  Identities=20%  Similarity=0.298  Sum_probs=202.5

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhH-hcCC-CC-----CCCCCcccccccEEEEEeCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMI-KNEW-GN-----TIYPIVPGHEIVGVVTEVGS   83 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~-~~~~-~~-----~~~p~~~G~e~~G~V~~vG~   83 (314)
                      |+++++..   +..++++++|.|+|+++||+|||.++|||++|++.+ .+.. +.     ..+|+++|||++|+|+++|+
T Consensus         3 ~~a~~~~~---~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~   79 (410)
T cd08238           3 TKAWRMYG---KGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK   79 (410)
T ss_pred             cEEEEEEc---CCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence            55555543   335889999999999999999999999999999876 3432 11     24688999999999999999


Q ss_pred             CCC-CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC----ceEECCCCCCc
Q 021300           84 KVS-KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH----FVVRIPEGTPL  158 (314)
Q Consensus        84 ~v~-~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~----~~~~~p~~~~~  158 (314)
                      +++ +|++||||++.+.. .|++|.+|. +         +        +....|+|+||+.++.+    .++++|+++++
T Consensus        80 ~v~~~~~vGdrV~~~~~~-~c~~~~~c~-~---------~--------g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~  140 (410)
T cd08238          80 KWQGKYKPGQRFVIQPAL-ILPDGPSCP-G---------Y--------SYTYPGGLATYHIIPNEVMEQDCLLIYEGDGY  140 (410)
T ss_pred             CccCCCCCCCEEEEcCCc-CCCCCCCCC-C---------c--------cccCCCcceEEEEecHHhccCCeEECCCCCCH
Confidence            998 59999999876655 688888772 1         0        12357999999999986    68999999999


Q ss_pred             cccccc-c--hhhhhhhhhh--------HhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCC---eEEEEeCChhhHHHH
Q 021300          159 DATAPL-L--CAGITVYSPL--------RFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGV---KVTVISTSPSKKSEA  223 (314)
Q Consensus       159 ~~aa~~-~--~~~~ta~~~l--------~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~---~vi~v~~~~~~~~~~  223 (314)
                      ++++.+ +  +. .+++.++        .....+++|++|+|+|+ |++|++++|+|+.+|+   +|++++.++++++.+
T Consensus       141 ~~aal~epl~~~-~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a  219 (410)
T cd08238         141 AEASLVEPLSCV-IGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA  219 (410)
T ss_pred             HHHhhcchHHHH-HHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence            988743 3  22 2233332        23455899999999985 9999999999999764   788888888777544


Q ss_pred             HHHc--------CCc-EEecCCC-H---HHHHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCC-CC--Ccc
Q 021300          224 IERL--------GAD-SFLVSRD-Q---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP-EK--PLE  285 (314)
Q Consensus       224 ~~~~--------ga~-~~v~~~~-~---~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~-~~--~~~  285 (314)
                       +++        |++ .++++.+ .   +.+.++++  ++|++||++|....+..++++++++|+++.++.. ..  +.+
T Consensus       220 -~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~  298 (410)
T cd08238         220 -QRLFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAP  298 (410)
T ss_pred             -HHhccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCcccc
Confidence             565        666 4666543 2   23444444  6999999998877799999999999988877543 22  357


Q ss_pred             cchhhhhcCceeEee
Q 021300          286 LPAFSLLMGEEEDSW  300 (314)
Q Consensus       286 ~~~~~~~~~~~~i~~  300 (314)
                      ++...++.+++++.+
T Consensus       299 ~~~~~~~~~~~~i~g  313 (410)
T cd08238         299 LNFYNVHYNNTHYVG  313 (410)
T ss_pred             ccHHHhhhcCcEEEE
Confidence            788888889998884

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.4e-34  Score=265.44  Aligned_cols=266  Identities=24%  Similarity=0.391  Sum_probs=216.1

Q ss_pred             ccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCC------C-CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEe
Q 021300           24 VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW------G-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV   96 (314)
Q Consensus        24 ~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~------~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~   96 (314)
                      .+++++++.|+++++||+|||+++++|++|+..+.+..      + ...+|.++|||++|+|+++|++++.|++||+|++
T Consensus        38 ~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~  117 (384)
T cd08265          38 ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTA  117 (384)
T ss_pred             CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEE
Confidence            38899999999999999999999999999998776321      1 1356789999999999999999999999999987


Q ss_pred             cccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCC-------Ccccccccchhhh
Q 021300           97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGT-------PLDATAPLLCAGI  169 (314)
Q Consensus        97 ~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~-------~~~~aa~~~~~~~  169 (314)
                      .+.. +|+.|..|..|.++.|..+...       |....|+|++|+.++.+.++++|+.+       +++ ++.++.++.
T Consensus       118 ~~~~-~~~~~~~c~~~~~~~~~~~~~~-------g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~  188 (384)
T cd08265         118 EEMM-WCGMCRACRSGSPNHCKNLKEL-------GFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTS  188 (384)
T ss_pred             CCCC-CCCCChhhhCcCcccCCCccee-------eecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHH
Confidence            7665 9999999999999999875421       22347999999999999999999863       444 556777889


Q ss_pred             hhhhhhHhc-CCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCH------HHH
Q 021300          170 TVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQ------DEM  241 (314)
Q Consensus       170 ta~~~l~~~-~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~------~~~  241 (314)
                      +||+++... .++++|++|||+|+|++|++++++|+..|+ +++++++.++ +.++++++|++.++++++.      +.+
T Consensus       189 ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~-~~~~~~~~g~~~~v~~~~~~~~~~~~~v  267 (384)
T cd08265         189 VAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEE-RRNLAKEMGADYVFNPTKMRDCLSGEKV  267 (384)
T ss_pred             HHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHH-HHHHHHHcCCCEEEcccccccccHHHHH
Confidence            999998655 578999999999889999999999999999 6777777766 5577789999998887632      334


Q ss_pred             HHHcC--CccEEEEccCCc-ccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300          242 QAAMG--TMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       242 ~~~~~--~~d~v~d~~g~~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~  299 (314)
                      .++..  ++|+++|++|+. ..+..++++|+++|+++.+|.......++...+..+..++.
T Consensus       268 ~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~  328 (384)
T cd08265         268 MEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIV  328 (384)
T ss_pred             HHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEE
Confidence            44443  699999999863 35788999999999999999765555555556666666665

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.1e-34  Score=263.09  Aligned_cols=284  Identities=27%  Similarity=0.451  Sum_probs=230.3

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCC---
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSK---   87 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~---   87 (314)
                      |+++++...+  ..+++.+++.|.+.++||+||+.+++||++|+..+.+.++. .+|.++|||++|+|+.+|+++++   
T Consensus         1 ~~a~~~~~~~--~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~   77 (367)
T cd08263           1 MKAAVLKGPN--PPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYG   77 (367)
T ss_pred             CeeEEEecCC--CCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCc
Confidence            6777876643  34788899999999999999999999999999988876653 67889999999999999999988   


Q ss_pred             CCCCCEEEecccccCCCCCccccCCCCCCCCccc-ccc-cccc-------------CCCCccCcccceEEeecCCceEEC
Q 021300           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVI-MTY-ANKY-------------HDGTITYGGYSDIMVADEHFVVRI  152 (314)
Q Consensus        88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~-~~~-~~~~-------------~~~~~~~g~~~~~~~v~~~~~~~~  152 (314)
                      |++||+|+..+ ..+|+.|.+|..+..++|++.. |.+ ++..             .......|++++|+.++.+.++++
T Consensus        78 ~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  156 (367)
T cd08263          78 LSVGDRVVGSF-IMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPL  156 (367)
T ss_pred             CCCCCEEEEcC-CCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEEC
Confidence            99999997644 4499999999999999999753 111 0000             000124689999999999999999


Q ss_pred             CCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcE
Q 021300          153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADS  231 (314)
Q Consensus       153 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~  231 (314)
                      |+++++++++.+++.+.|||.++.....+.+++++||+|+|.+|++++++|+.+|++ +++++.++++.. .++++|++.
T Consensus       157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~-~~~~~g~~~  235 (367)
T cd08263         157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLA-KAKELGATH  235 (367)
T ss_pred             CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHH-HHHHhCCce
Confidence            999999999999999999999998877789999999998899999999999999998 777777776664 447899999


Q ss_pred             EecCCCHHH---HHHHc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC--CcccchhhhhcCceeEe
Q 021300          232 FLVSRDQDE---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGEEEDS  299 (314)
Q Consensus       232 ~v~~~~~~~---~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~--~~~~~~~~~~~~~~~i~  299 (314)
                      +++++..+.   +.+..  .++|++||++++......++++|+++|+++.+|....  ...++...++.++.++.
T Consensus       236 v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  310 (367)
T cd08263         236 TVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKII  310 (367)
T ss_pred             EecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEE
Confidence            998876543   33333  3699999999986458899999999999999987542  34555566555666654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=3.3e-34  Score=260.89  Aligned_cols=251  Identities=22%  Similarity=0.290  Sum_probs=205.1

Q ss_pred             ccchhhhccCCC---CccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCC
Q 021300           11 KNAFGWAAKDTS---GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVS   86 (314)
Q Consensus        11 ~~~~~~~~~~~~---~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~   86 (314)
                      ||++++..+++|   +.+++.++|.|+|+++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~   80 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL   80 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence            678888776655   56888899999999999999999999999999988886642 35789999999999999999999


Q ss_pred             C-CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccc
Q 021300           87 K-FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL  165 (314)
Q Consensus        87 ~-~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~  165 (314)
                      + |++||+|+..+                                  ...|+|++|+.++++.++++|+++++++++.++
T Consensus        81 ~~~~vGd~V~~~~----------------------------------~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~  126 (324)
T cd08291          81 AQSLIGKRVAFLA----------------------------------GSYGTYAEYAVADAQQCLPLPDGVSFEQGASSF  126 (324)
T ss_pred             ccCCCCCEEEecC----------------------------------CCCCcchheeeecHHHeEECCCCCCHHHHhhhc
Confidence            6 99999997421                                  014899999999999999999999999999888


Q ss_pred             hhhhhhhhhhHhcCCCCCCCEEEEE-c-CChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---
Q 021300          166 CAGITVYSPLRFYGLDKPGMHVGVV-G-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---  240 (314)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~vlI~-G-ag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---  240 (314)
                      +...|||.++.. ... ++++++|+ | +|++|++++|+|+.+|++++++++++++++. ++++|++.+++++..++   
T Consensus       127 ~~~~ta~~~~~~-~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~  203 (324)
T cd08291         127 VNPLTALGMLET-ARE-EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDL-LKKIGAEYVLNSSDPDFLED  203 (324)
T ss_pred             ccHHHHHHHHHh-hcc-CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHcCCcEEEECCCccHHHH
Confidence            888999865543 333 56666665 4 5999999999999999999998888777644 47899999998876543   


Q ss_pred             HHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-c-ccchhhhhcCceeEe
Q 021300          241 MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-L-ELPAFSLLMGEEEDS  299 (314)
Q Consensus       241 ~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~-~~~~~~~~~~~~~i~  299 (314)
                      +.+...  ++|++||++|+.. ....+++++++|+++.+|...+. . .++...++.+++++.
T Consensus       204 v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  265 (324)
T cd08291         204 LKELIAKLNATIFFDAVGGGL-TGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIE  265 (324)
T ss_pred             HHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEE
Confidence            334433  6999999999875 78889999999999999976432 2 366677777888876

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=1.2e-33  Score=259.10  Aligned_cols=279  Identities=24%  Similarity=0.331  Sum_probs=223.8

Q ss_pred             ccchhhhccCCCCccceeeeeecCCC-CCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATG-EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~-~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      |+++++..   ++.++++++++|+|. ++||+|||.++++|+.|+....+.++ ..+|.++|+|++|+|+++|++++.++
T Consensus         1 ~~a~~~~~---~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~   76 (344)
T cd08284           1 MKAVVFKG---PGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLK   76 (344)
T ss_pred             CeeEEEec---CCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccC
Confidence            56666653   346889999999985 99999999999999999988877655 34578899999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC--ceEECCCCCCcccccccchh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCA  167 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~  167 (314)
                      +||+|+..+.. +|++|.+|.++..+.|++......   .......|++++|+.++.+  .++++|+++++++++.+++.
T Consensus        77 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~  152 (344)
T cd08284          77 VGDRVVSPFTI-ACGECFYCRRGQSGRCAKGGLFGY---AGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDI  152 (344)
T ss_pred             CCCEEEEcccC-CCCCChHHhCcCcccCCCCccccc---cccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCc
Confidence            99999876654 899999999999999987532100   0011236899999999864  99999999999999999999


Q ss_pred             hhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCH---HHHHH
Q 021300          168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQ---DEMQA  243 (314)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~---~~~~~  243 (314)
                      +.|||+++.. ..+++|++|||+|+|.+|++++++|+.+|+ +++++++.+++. .+++++|+.. ++.+..   ..+.+
T Consensus       153 ~~ta~~~~~~-~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~-~~~~~~g~~~-~~~~~~~~~~~l~~  229 (344)
T cd08284         153 LPTGYFGAKR-AQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERL-ERAAALGAEP-INFEDAEPVERVRE  229 (344)
T ss_pred             hHHHHhhhHh-cCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHH-HHHHHhCCeE-EecCCcCHHHHHHH
Confidence            9999999976 557999999999889999999999999997 788876665554 5667899763 455443   33444


Q ss_pred             Hc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC-CCcccchhhhhcCceeEee
Q 021300          244 AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       244 ~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~i~~  300 (314)
                      +.  +++|++||++|+...+...+++++++|+++.+|... ....++....+.+++.+.+
T Consensus       230 ~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  289 (344)
T cd08284         230 ATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRF  289 (344)
T ss_pred             HhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEE
Confidence            43  369999999997666899999999999999999875 3344555556667777653

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=2.5e-33  Score=257.04  Aligned_cols=268  Identities=28%  Similarity=0.396  Sum_probs=216.6

Q ss_pred             CccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcC-CC--CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEeccc
Q 021300           23 GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE-WG--NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM   99 (314)
Q Consensus        23 ~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~-~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~   99 (314)
                      ..+++++.+.|.+.++||+|||.++++|+.|+..+.+. .+  ....|.++|+|++|+|+++|+++++|++||+|++.+.
T Consensus         8 ~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~   87 (343)
T cd05285           8 GDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPG   87 (343)
T ss_pred             CceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEccc
Confidence            55888899999999999999999999999998876432 11  1245778999999999999999999999999987654


Q ss_pred             ccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhcC
Q 021300          100 VGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYG  179 (314)
Q Consensus       100 ~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~  179 (314)
                      . +|++|.+|..|.+++|++..+..      .....|+|++|+.++.+.++++|+++++++++.+ ..+.+|++++ ...
T Consensus        88 ~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~  158 (343)
T cd05285          88 V-PCRTCEFCKSGRYNLCPDMRFAA------TPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRA  158 (343)
T ss_pred             c-CCCCChhHhCcCcccCcCccccc------cccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-Hhc
Confidence            4 99999999999999998643311      1124689999999999999999999999998766 5778899887 456


Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHH------HHHHHcC--CccE
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQD------EMQAAMG--TMDG  250 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~------~~~~~~~--~~d~  250 (314)
                      .+++|++++|+|+|.+|++++|+|+.+|++ ++++++++++. ++.+++|++.++++++.+      .+.+...  ++|+
T Consensus       159 ~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~  237 (343)
T cd05285         159 GVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRL-EFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDV  237 (343)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH-HHHHHcCCcEEeccccccchhHHHHHHHHhCCCCCCE
Confidence            689999999998899999999999999997 77776776665 455789999988877543      2334433  5999


Q ss_pred             EEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       251 v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                      +||++|....+...+++++++|+++.+|.......++...+..+.+.+.+
T Consensus       238 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  287 (343)
T cd05285         238 VIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRG  287 (343)
T ss_pred             EEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEE
Confidence            99999986558999999999999999997655455555556666666653

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=2.2e-33  Score=260.52  Aligned_cols=262  Identities=28%  Similarity=0.349  Sum_probs=210.3

Q ss_pred             ccchhhhccCCCCccceeeeeecCC-CCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      |+++++.   +++.+++++++.|.+ .++||+|||+++++|+.|++...|.++ ..+|.++|||++|+|+++|++++.++
T Consensus         1 m~~~~~~---~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~   76 (375)
T cd08282           1 MKAVVYG---GPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLK   76 (375)
T ss_pred             CceEEEe---cCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCC
Confidence            5666663   345688999999996 799999999999999999998888765 45689999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccc---cCCCCccCcccceEEeecCC--ceEECCCCCCcc---cc
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK---YHDGTITYGGYSDIMVADEH--FVVRIPEGTPLD---AT  161 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~---~~~~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~---~a  161 (314)
                      +||+|++.+.. +|+.|..|.+|.+++|.+..+.+.+.   +.......|+|++|+.++..  .++++|++++++   ++
T Consensus        77 ~Gd~V~~~~~~-~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~  155 (375)
T cd08282          77 VGDRVVVPFNV-ACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDY  155 (375)
T ss_pred             CCCEEEEeCCC-CCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhhe
Confidence            99999765544 79999999999999998743222110   11112246899999999975  899999999998   56


Q ss_pred             cccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 021300          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (314)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~  240 (314)
                      +.++..+.++|+++ ....+++|++|+|+|+|++|++++|+++.+|+ +++++++.+++. ++.+++|++ .+++++.+.
T Consensus       156 a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~-~~~~~~g~~-~v~~~~~~~  232 (375)
T cd08282         156 LMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERL-DLAESIGAI-PIDFSDGDP  232 (375)
T ss_pred             eeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHcCCe-EeccCcccH
Confidence            77888899999999 45568999999999889999999999999998 687766665554 666789984 456655433


Q ss_pred             ---HHHHc-CCccEEEEccCCcc-----------cHHHHHHhhccCCEEEEEcCC
Q 021300          241 ---MQAAM-GTMDGIIDTVSAVH-----------PLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       241 ---~~~~~-~~~d~v~d~~g~~~-----------~~~~~~~~l~~~G~~v~~G~~  280 (314)
                         +.++. +++|+++|++|...           ++..++++++++|+++.+|..
T Consensus       233 ~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~  287 (375)
T cd08282         233 VEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVY  287 (375)
T ss_pred             HHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEecc
Confidence               33333 36999999998763           378899999999999988864

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.7e-33  Score=255.56  Aligned_cols=266  Identities=22%  Similarity=0.315  Sum_probs=216.9

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      ||++++..   ++.+++++++.|+++++||+|||.++++|+.|.....+.++   .|.++|+|++|+|+++|++   +++
T Consensus         1 ~~a~~~~~---~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~   71 (319)
T cd08242           1 MKALVLDG---GLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELV   71 (319)
T ss_pred             CeeEEEeC---CCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCC
Confidence            56777754   34588999999999999999999999999999988877553   5788999999999999988   679


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCC-ccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT-ITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      ||+|...+.. +|++|.+|.+|.+++|.+....       +. ...|++++|+.++.++++++|+++++++++.+ ....
T Consensus        72 G~~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~  142 (319)
T cd08242          72 GKRVVGEINI-ACGRCEYCRRGLYTHCPNRTVL-------GIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLA  142 (319)
T ss_pred             CCeEEECCCc-CCCCChhhhCcCcccCCCCccc-------CccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHH
Confidence            9999766555 7999999999999999875321       11 24689999999999999999999999888753 3445


Q ss_pred             hhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCcc
Q 021300          170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD  249 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d  249 (314)
                      ++|.++ ...++++|+++||+|+|.+|++++|+|+.+|++++++++++++.+.+ +++|++.+++++..    ...+++|
T Consensus       143 ~~~~~~-~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~----~~~~~~d  216 (319)
T cd08242         143 AALEIL-EQVPITPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLALA-RRLGVETVLPDEAE----SEGGGFD  216 (319)
T ss_pred             HHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHcCCcEEeCcccc----ccCCCCC
Confidence            666655 44558999999999889999999999999999998888887777555 56999887776542    1124699


Q ss_pred             EEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       250 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                      +++|++|+...+..++++++++|+++..+.......++...+..++.++.+
T Consensus       217 ~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~  267 (319)
T cd08242         217 VVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVG  267 (319)
T ss_pred             EEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEE
Confidence            999999886668899999999999999877665666777666667777653

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=1.3e-33  Score=256.43  Aligned_cols=252  Identities=24%  Similarity=0.340  Sum_probs=211.8

Q ss_pred             ccchhhhccCCC-CccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 021300           11 KNAFGWAAKDTS-GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKF   88 (314)
Q Consensus        11 ~~~~~~~~~~~~-~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~   88 (314)
                      ||++++..++++ +.+++.+++.|.+.++||+|||.++++|+.|+..+.|.++ .+..|.++|||++|+|+++|++++.+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   80 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL   80 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence            677777665443 4578899999999999999999999999999998877654 24568899999999999999999999


Q ss_pred             CCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhh
Q 021300           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG  168 (314)
Q Consensus        89 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~  168 (314)
                      ++||+|+..                                   ...|+|++|+.++...++++|+++++++++.+++..
T Consensus        81 ~~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~  125 (324)
T cd08292          81 QVGQRVAVA-----------------------------------PVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMP  125 (324)
T ss_pred             CCCCEEEec-----------------------------------cCCCcceeEEEEchHHeEECCCCCCHHHhhhccccH
Confidence            999999742                                   136899999999999999999999999999998889


Q ss_pred             hhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHH
Q 021300          169 ITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAA  244 (314)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~  244 (314)
                      .++|+++.. ..+++|++|||+|+ |.+|++++|+|+.+|++++++++++++++.+. ++|++.++++++.+.   +.+.
T Consensus       126 ~ta~~~~~~-~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~i~~~  203 (324)
T cd08292         126 LSALMLLDF-LGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELR-ALGIGPVVSTEQPGWQDKVREA  203 (324)
T ss_pred             HHHHHHHHh-hCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-hcCCCEEEcCCCchHHHHHHHH
Confidence            999999865 56899999999987 99999999999999999999999988876664 589999888876543   3444


Q ss_pred             cC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC-CCcccchhhhhcCceeEee
Q 021300          245 MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       245 ~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~i~~  300 (314)
                      +.  ++|++||++|+. ....++++++++|+++.+|... ....++....+.++.++.+
T Consensus       204 ~~~~~~d~v~d~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  261 (324)
T cd08292         204 AGGAPISVALDSVGGK-LAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRG  261 (324)
T ss_pred             hCCCCCcEEEECCCCh-hHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEE
Confidence            43  699999999987 4889999999999999999753 2345565556667777763

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=3e-33  Score=255.97  Aligned_cols=271  Identities=25%  Similarity=0.391  Sum_probs=216.4

Q ss_pred             CCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHh-cCCC--CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEecc
Q 021300           22 SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIK-NEWG--NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC   98 (314)
Q Consensus        22 ~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~-~~~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~   98 (314)
                      ++.+++++.+.|+++++||+|||.++++|++|..... +.++  ....|.++|+|++|+|+++|++++.|++||+|++.+
T Consensus         6 ~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~   85 (339)
T cd08232           6 AGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNP   85 (339)
T ss_pred             CCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEcc
Confidence            4568889999999999999999999999999987763 3221  124577899999999999999999999999997664


Q ss_pred             cccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhc
Q 021300           99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFY  178 (314)
Q Consensus        99 ~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~  178 (314)
                      . ++|++|.+|..|..+.|.++.+.  +....-....|+|++|+.++.+.++++|+++++++++. ..++.++|+++...
T Consensus        86 ~-~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~  161 (339)
T cd08232          86 S-RPCGTCDYCRAGRPNLCLNMRFL--GSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRA  161 (339)
T ss_pred             C-CcCCCChHHhCcCcccCccccce--eeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhc
Confidence            4 48999999999999999986321  11000012479999999999999999999999998865 57788999999877


Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHH---cCCccEEEEc
Q 021300          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA---MGTMDGIIDT  254 (314)
Q Consensus       179 ~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~---~~~~d~v~d~  254 (314)
                      ..+ +|++|||.|+|.+|.+++|+|+.+|+ +++++++++++.. +++++|++.++++++.+ +...   .+++|+++|+
T Consensus       162 ~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~-~~~~~g~~~vi~~~~~~-~~~~~~~~~~vd~vld~  238 (339)
T cd08232         162 GDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLA-VARAMGADETVNLARDP-LAAYAADKGDFDVVFEA  238 (339)
T ss_pred             CCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH-HHHHcCCCEEEcCCchh-hhhhhccCCCccEEEEC
Confidence            765 99999998889999999999999999 7777777766554 67889999988887654 2222   2359999999


Q ss_pred             cCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300          255 VSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       255 ~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~  299 (314)
                      +|....+...++.|+++|+++.+|..+.+..++...++.+.+++.
T Consensus       239 ~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  283 (339)
T cd08232         239 SGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLR  283 (339)
T ss_pred             CCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEE
Confidence            997555889999999999999998655444444555555666654

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.2e-33  Score=257.05  Aligned_cols=266  Identities=25%  Similarity=0.306  Sum_probs=210.0

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC-----------CCCCCCcccccccEEEE
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-----------NTIYPIVPGHEIVGVVT   79 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~-----------~~~~p~~~G~e~~G~V~   79 (314)
                      ||++++..+    .+++++++.|++.++||+|||.++++|+.|++.+.|...           ...+|.++|+|++|+|+
T Consensus         1 m~a~~~~~~----~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~   76 (341)
T cd08262           1 MRAAVFRDG----PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVV   76 (341)
T ss_pred             CceEEEeCC----ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEE
Confidence            577776542    588899999999999999999999999999988876221           22457899999999999


Q ss_pred             EeCCCCCC-CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCc
Q 021300           80 EVGSKVSK-FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPL  158 (314)
Q Consensus        80 ~vG~~v~~-~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~  158 (314)
                      ++|+++++ |++||+|+..+. ..|+.|..|..|..                 ....|+|++|+.++.+.++++|+++++
T Consensus        77 ~vG~~v~~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~-----------------~~~~g~~~~~~~v~~~~~~~lP~~~s~  138 (341)
T cd08262          77 DYGPGTERKLKVGTRVTSLPL-LLCGQGASCGIGLS-----------------PEAPGGYAEYMLLSEALLLRVPDGLSM  138 (341)
T ss_pred             EeCCCCcCCCCCCCEEEecCC-cCCCCChhhhCCCC-----------------cCCCCceeeeEEechHHeEECCCCCCH
Confidence            99999997 999999987655 48999999943211                 124689999999999999999999999


Q ss_pred             ccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH
Q 021300          159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ  238 (314)
Q Consensus       159 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~  238 (314)
                      ++++ ++..+.+||+++ ....+++|++|||+|+|.+|.+++|+++.+|++++++++..++..++++++|++.+++++..
T Consensus       139 ~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~  216 (341)
T cd08262         139 EDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAAD  216 (341)
T ss_pred             HHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCc
Confidence            8876 667888999986 45668999999999889999999999999999866656555555567788999888887654


Q ss_pred             HH------HHHHc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          239 DE------MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       239 ~~------~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                      +.      +....  +++|+++|++|+...+..++++++++|+++.+|.......+.......+++.+.+
T Consensus       217 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~  286 (341)
T cd08262         217 SPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQF  286 (341)
T ss_pred             CHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEE
Confidence            21      12222  3699999999875457889999999999999997654333333333456666653

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=3e-33  Score=256.60  Aligned_cols=277  Identities=23%  Similarity=0.292  Sum_probs=220.0

Q ss_pred             ccchhhhccCCCCccceeeeeecCC-CCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ||++.+..   ++.+++.+.+.|.| +++||+||+.++++|++|+..+.|.++ ...|.++|||++|+|+++|+++..++
T Consensus         1 m~~~~~~~---~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~   76 (345)
T cd08287           1 MRATVIHG---PGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP-TRAPAPIGHEFVGVVEEVGSEVTSVK   76 (345)
T ss_pred             CceeEEec---CCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC-CCCCcccccceEEEEEEeCCCCCccC
Confidence            56777753   44588999999996 899999999999999999988877654 34578999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC--ceEECCCCCCccccc-----
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATA-----  162 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa-----  162 (314)
                      +||+|++. ....|+.|..|..|..+.|.+..+.       +....|+|++|+.++..  .++++|++++++.+.     
T Consensus        77 ~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~  148 (345)
T cd08287          77 PGDFVIAP-FAISDGTCPFCRAGFTTSCVHGGFW-------GAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLL  148 (345)
T ss_pred             CCCEEEec-cccCCCCChhhhCcCcccCCCCCcc-------cCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhH
Confidence            99999753 4457999999999999999864321       23467999999999874  999999999873221     


Q ss_pred             ccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH--
Q 021300          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE--  240 (314)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~--  240 (314)
                      .+...+.+||+++. ...+++|++++|.|+|.+|++++|+|+..|+++++++.+.+.+.++.+++|++.++++...+.  
T Consensus       149 ~l~~~~~~a~~~~~-~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~  227 (345)
T cd08287         149 ALSDVMGTGHHAAV-SAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVA  227 (345)
T ss_pred             hhhcHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHH
Confidence            22356788999886 445899999999888999999999999999974444444444557778899999998876543  


Q ss_pred             -HHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          241 -MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       241 -~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                       +.+..+  ++|+++|++|+...+..+++.++++|+++.+|.+..+..++....+.++.++..
T Consensus       228 ~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (345)
T cd08287         228 RVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAG  290 (345)
T ss_pred             HHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEE
Confidence             334433  699999999876678999999999999999997765556666455667777653

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.9e-33  Score=253.91  Aligned_cols=275  Identities=29%  Similarity=0.428  Sum_probs=224.8

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      |+++++..  .+..+.++++|.|.+.+++|+|||.++++|+.|+....+.++....|.++|+|++|+|+++|++++.+++
T Consensus         1 m~a~~~~~--~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~   78 (332)
T cd08259           1 MKAAILHK--PNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKP   78 (332)
T ss_pred             CeEEEEec--CCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCC
Confidence            56677654  3445788899999999999999999999999999988887665567889999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  170 (314)
                      ||+|+..+.. +|+.|.+|..+.++.|++.  ..+     +....|++++|+.++...++++|+++++++++.+++.+.+
T Consensus        79 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~t  150 (332)
T cd08259          79 GDRVILYYYI-PCGKCEYCLSGEENLCRNR--AEY-----GEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGT  150 (332)
T ss_pred             CCEEEECCCC-CCcCChhhhCCCcccCCCc--ccc-----ccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHH
Confidence            9999876544 7999999999999999874  211     2345789999999999999999999999999999999999


Q ss_pred             hhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH-HHHHHHcCCc
Q 021300          171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-DEMQAAMGTM  248 (314)
Q Consensus       171 a~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~-~~~~~~~~~~  248 (314)
                      ||++++. ..+.+++++||+|+ |++|++++++++..|++++++++++++.+.+ ++++.+.+++..+. +.+.+. .++
T Consensus       151 a~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~  227 (332)
T cd08259         151 AVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KELGADYVIDGSKFSEDVKKL-GGA  227 (332)
T ss_pred             HHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCCcEEEecHHHHHHHHhc-cCC
Confidence            9999987 66899999999997 9999999999999999999999887776555 67888777765431 222222 279


Q ss_pred             cEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-cccchhhhhcCceeEe
Q 021300          249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGEEEDS  299 (314)
Q Consensus       249 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~~~~~~~~~~~~~~i~  299 (314)
                      |++++++|... ...++++++++|+++.+|..... ..++......++..+.
T Consensus       228 d~v~~~~g~~~-~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~  278 (332)
T cd08259         228 DVVIELVGSPT-IEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRII  278 (332)
T ss_pred             CEEEECCChHH-HHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEE
Confidence            99999999875 88999999999999999875432 2233333334555544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=3.4e-33  Score=255.97  Aligned_cols=275  Identities=25%  Similarity=0.373  Sum_probs=225.2

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      ||++.+...   +.+.+++.+.|++.+++|+|||.++++|+.|+..+.+.++....|.++|+|++|+|+++|++++.|++
T Consensus         1 ~~~~~~~~~---~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~   77 (343)
T cd08235           1 MKAAVLHGP---NDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKV   77 (343)
T ss_pred             CeEEEEecC---CceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCC
Confidence            566666543   34788899999999999999999999999999988776543345789999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCc-----eEECCCCCCcccccccc
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF-----VVRIPEGTPLDATAPLL  165 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-----~~~~p~~~~~~~aa~~~  165 (314)
                      ||+|+..+. .+|++|..|..|..++|+...+.       +....|+|++|+.++...     ++++|+++++++++.+ 
T Consensus        78 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-  148 (343)
T cd08235          78 GDRVFVAPH-VPCGECHYCLRGNENMCPNYKKF-------GNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-  148 (343)
T ss_pred             CCEEEEccC-CCCCCChHHHCcCcccCCCccee-------ccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-
Confidence            999987654 47889999999999999875432       234579999999999988     9999999999998765 


Q ss_pred             hhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHHH---H
Q 021300          166 CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDE---M  241 (314)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~  241 (314)
                      ..+.+||+++... .+++|++|+|+|+|.+|++++++|+..|++ ++++++++++...+ +++|.+.++++++++.   +
T Consensus       149 ~~~~~a~~~l~~~-~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~-~~~g~~~~~~~~~~~~~~~i  226 (343)
T cd08235         149 EPLACCINAQRKA-GIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFA-KKLGADYTIDAAEEDLVEKV  226 (343)
T ss_pred             hHHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCcEEecCCccCHHHHH
Confidence            7888999999765 689999999998899999999999999998 87777777777555 6789999888877543   3


Q ss_pred             HHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC--CcccchhhhhcCceeEe
Q 021300          242 QAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGEEEDS  299 (314)
Q Consensus       242 ~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~--~~~~~~~~~~~~~~~i~  299 (314)
                      .+...  ++|+++|++++...+..++++++++|+++.+|....  ...++......++..+.
T Consensus       227 ~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~  288 (343)
T cd08235         227 RELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITIT  288 (343)
T ss_pred             HHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEE
Confidence            33333  599999999976568899999999999999987543  24455555566666664

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.2e-33  Score=254.12  Aligned_cols=279  Identities=24%  Similarity=0.327  Sum_probs=227.8

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      |+++.+...+.+..+++.+.+.|.+.+++|+||+.++++|++|+..+.|.... ..+|.++|||++|+|+++|+++..|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK   80 (342)
T ss_pred             CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence            56777765455667888888888899999999999999999999888775542 35678999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||+|++.+.. +|++|.+|.++.+|.|+...+  .     |....|++++|+.++.+.++++|+.+++++++.+++.+.
T Consensus        81 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~-----g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~  152 (342)
T cd08266          81 PGQRVVIYPGI-SCGRCEYCLAGRENLCAQYGI--L-----GEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFL  152 (342)
T ss_pred             CCCEEEEcccc-ccccchhhccccccccccccc--c-----ccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHH
Confidence            99999876554 799999999999999987422  1     234578999999999999999999999999999999999


Q ss_pred             hhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHH---HHc
Q 021300          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ---AAM  245 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~---~~~  245 (314)
                      ++|+++.....++++++++|+|+ +.+|++++++++..|++++++++++++...+ +.++.+.+++..+.+...   +..
T Consensus       153 ~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  231 (342)
T cd08266         153 TAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KELGADYVIDYRKEDFVREVRELT  231 (342)
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCeEEecCChHHHHHHHHHh
Confidence            99999877677899999999998 7999999999999999999998888777555 667887777766644322   222


Q ss_pred             --CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEe
Q 021300          246 --GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDS  299 (314)
Q Consensus       246 --~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~  299 (314)
                        +++|++++++|... +...++.++++|+++.+|.... ...++....+.++..+.
T Consensus       232 ~~~~~d~~i~~~g~~~-~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~  287 (342)
T cd08266         232 GKRGVDVVVEHVGAAT-WEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSIL  287 (342)
T ss_pred             CCCCCcEEEECCcHHH-HHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEE
Confidence              36999999999864 8899999999999999987653 23444434455555554

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=7.8e-33  Score=253.67  Aligned_cols=274  Identities=26%  Similarity=0.419  Sum_probs=223.0

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      |+++++...   +.+++++.+.|+++++||+||+.++++|+.|+....+.+. ...|.++|+|++|+|+.+|++++.|++
T Consensus         1 ~~a~~~~~~---~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~   76 (343)
T cd08236           1 MKALVLTGP---GDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAV   76 (343)
T ss_pred             CeeEEEecC---CceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCC
Confidence            577777654   2478888999999999999999999999999988777553 345788999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  170 (314)
                      ||+|+..+.. .|++|.+|..|.++.|+...+.       +....|+|++|+.++.+.++++|+++++++++.+ ....+
T Consensus        77 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~t  147 (343)
T cd08236          77 GDRVAVNPLL-PCGKCEYCKKGEYSLCSNYDYI-------GSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAV  147 (343)
T ss_pred             CCEEEEcCCC-CCCCChhHHCcChhhCCCcceE-------ecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHH
Confidence            9999765444 7999999999999999885321       2346789999999999999999999999998877 56789


Q ss_pred             hhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHH--HHHHHcC-
Q 021300          171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQAAMG-  246 (314)
Q Consensus       171 a~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~--~~~~~~~-  246 (314)
                      ||+++. ...+++|++|+|+|+|.+|.+++|+|+.+|++ ++++++++++...+ +++|++.++++++..  .+....+ 
T Consensus       148 a~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~~~~~  225 (343)
T cd08236         148 ALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVA-RELGADDTINPKEEDVEKVRELTEG  225 (343)
T ss_pred             HHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCCEEecCccccHHHHHHHhCC
Confidence            999987 45589999999998899999999999999997 88888887766544 789998888876543  3333333 


Q ss_pred             -CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCccc---chhhhhcCceeEe
Q 021300          247 -TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLEL---PAFSLLMGEEEDS  299 (314)
Q Consensus       247 -~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~---~~~~~~~~~~~i~  299 (314)
                       ++|+++|++|....+..++++|+++|+++.+|....+..+   +...++.++.++.
T Consensus       226 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  282 (343)
T cd08236         226 RGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQ  282 (343)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEE
Confidence             5999999998766689999999999999999976543222   3334456666665

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=4.2e-33  Score=255.65  Aligned_cols=222  Identities=17%  Similarity=0.134  Sum_probs=182.9

Q ss_pred             CCCccceeeeeecCCC-CCeEEEEEeeeccChhhhhhHhcCC---CCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEe
Q 021300           21 TSGVLSPFHFSRRATG-EKDVTFKVTHCGICHSDLHMIKNEW---GNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV   96 (314)
Q Consensus        21 ~~~~~~~~~~~~p~~~-~~eVlVkv~a~~l~~~d~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~   96 (314)
                      .++.+++.+++.|+|. ++||||||.++|||+.|...+....   ....+|.++|||++|+|+++|+++++|++||+|+.
T Consensus        19 ~~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~   98 (345)
T cd08293          19 VAENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTS   98 (345)
T ss_pred             CccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEe
Confidence            3567888899999875 9999999999999999864332111   11356789999999999999999999999999963


Q ss_pred             cccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCccc----ccccchhhhhhh
Q 021300           97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDA----TAPLLCAGITVY  172 (314)
Q Consensus        97 ~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~----aa~~~~~~~ta~  172 (314)
                                                           ..++|+||+.++++.++++|+++++.+    ++.++.++.|||
T Consensus        99 -------------------------------------~~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~  141 (345)
T cd08293          99 -------------------------------------FNWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTAL  141 (345)
T ss_pred             -------------------------------------cCCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHH
Confidence                                                 114699999999999999999865433    446777899999


Q ss_pred             hhhHhcCCCCCC--CEEEEEcC-ChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHHc
Q 021300          173 SPLRFYGLDKPG--MHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM  245 (314)
Q Consensus       173 ~~l~~~~~~~~g--~~vlI~Ga-g~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~~~  245 (314)
                      +++.....+++|  ++|||+|+ |++|++++|+|+++|+ +|+++++++++.+.+.+++|++.++++.+.+   .+.++.
T Consensus       142 ~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~  221 (345)
T cd08293         142 IGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELC  221 (345)
T ss_pred             HHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHC
Confidence            999777767876  99999997 9999999999999999 7999988888776666669999999887643   344444


Q ss_pred             -CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCC
Q 021300          246 -GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       246 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                       +++|++||++|+.. +..++++|+++|+++.+|..
T Consensus       222 ~~gvd~vid~~g~~~-~~~~~~~l~~~G~iv~~G~~  256 (345)
T cd08293         222 PEGVDVYFDNVGGEI-SDTVISQMNENSHIILCGQI  256 (345)
T ss_pred             CCCceEEEECCCcHH-HHHHHHHhccCCEEEEEeee
Confidence             37999999999875 79999999999999999853

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=9.5e-33  Score=252.79  Aligned_cols=250  Identities=21%  Similarity=0.190  Sum_probs=199.1

Q ss_pred             ccchhhhccCCCCccceeeeee----cCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccc--cEEEEEeCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSR----RATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEI--VGVVTEVGS   83 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~----p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~--~G~V~~vG~   83 (314)
                      ++++.... ++++.|++.+.+.    |+|++|||||||++++||+.|++.+.|.... ...|+++|++.  .|++..+|+
T Consensus         8 ~~~~~~~~-~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~   86 (338)
T cd08295           8 LKAYVTGF-PKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDS   86 (338)
T ss_pred             EecCCCCC-CCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEec
Confidence            45555444 3466788888877    8999999999999999999999988775432 25678899754  566666889


Q ss_pred             CCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecC-CceEECC-CCCCcc-c
Q 021300           84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADE-HFVVRIP-EGTPLD-A  160 (314)
Q Consensus        84 ~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~-~~~~~~p-~~~~~~-~  160 (314)
                      ++++|++||+|+.                                      .|+|+||++++. ..++++| +.++++ +
T Consensus        87 ~v~~~~vGd~V~~--------------------------------------~g~~aey~~v~~~~~~~~lp~~~~~~~~~  128 (338)
T cd08295          87 GNPDFKVGDLVWG--------------------------------------FTGWEEYSLIPRGQDLRKIDHTDVPLSYY  128 (338)
T ss_pred             CCCCCCCCCEEEe--------------------------------------cCCceeEEEecchhceeecCCCCCCHHHH
Confidence            9999999999962                                      268999999999 7999995 678876 7


Q ss_pred             ccccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCC-H
Q 021300          161 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-Q  238 (314)
Q Consensus       161 aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~-~  238 (314)
                      ++++++++.|||+++.....+++|++|||+|+ |++|++++|+|+.+|++++++++++++.+.+.+++|++.++++.+ .
T Consensus       129 aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~  208 (338)
T cd08295         129 LGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEP  208 (338)
T ss_pred             HHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcc
Confidence            88899999999999977777899999999997 999999999999999999988888877755544499999888643 2


Q ss_pred             H---HHHHHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-c-----ccchhhhhcCceeEee
Q 021300          239 D---EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-L-----ELPAFSLLMGEEEDSW  300 (314)
Q Consensus       239 ~---~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~-----~~~~~~~~~~~~~i~~  300 (314)
                      +   .+.+.. +++|++||++|+. .+..++++++++|+++.+|..++. .     .++...+..+++++.+
T Consensus       209 ~~~~~i~~~~~~gvd~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g  279 (338)
T cd08295         209 DLDAALKRYFPNGIDIYFDNVGGK-MLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQG  279 (338)
T ss_pred             cHHHHHHHhCCCCcEEEEECCCHH-HHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeE
Confidence            2   333333 3799999999985 589999999999999999975432 1     1344556667777663

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.9e-32  Score=250.23  Aligned_cols=252  Identities=19%  Similarity=0.277  Sum_probs=204.9

Q ss_pred             cchhhhcc---CCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 021300           12 NAFGWAAK---DTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKF   88 (314)
Q Consensus        12 ~~~~~~~~---~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   88 (314)
                      |++.+...   ++++.++..++|.|+|+++||+|||+++++|+.|..++.+..+...+|.++|+|++|+|+++|+++++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (336)
T TIGR02817         1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF   80 (336)
T ss_pred             CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            35556664   667888899999999999999999999999999998887765545678899999999999999999999


Q ss_pred             CCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhh
Q 021300           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG  168 (314)
Q Consensus        89 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~  168 (314)
                      ++||+|+...                                .....|+|++|+.++.+.++++|+++++++++.+++..
T Consensus        81 ~~Gd~V~~~~--------------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~  128 (336)
T TIGR02817        81 KPGDEVWYAG--------------------------------DIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTS  128 (336)
T ss_pred             CCCCEEEEcC--------------------------------CCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHH
Confidence            9999997311                                01236899999999999999999999999999999999


Q ss_pred             hhhhhhhHhcCCCCC-----CCEEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCCcEEecCCCH--H
Q 021300          169 ITVYSPLRFYGLDKP-----GMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQ--D  239 (314)
Q Consensus       169 ~ta~~~l~~~~~~~~-----g~~vlI~Ga-g~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~--~  239 (314)
                      .|||+++....++++     |++|||+|+ |++|++++|+|+.+ |++++++++++++.+.+ +++|++.++++...  .
T Consensus       129 ~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~  207 (336)
T TIGR02817       129 ITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV-LELGAHHVIDHSKPLKA  207 (336)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH-HHcCCCEEEECCCCHHH
Confidence            999999977666776     999999987 99999999999998 99999998888777555 78999998875441  2


Q ss_pred             HHHHHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300          240 EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       240 ~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~  299 (314)
                      .+++.. +++|+++|++++...+...+++++++|+++.++..   ..++...+..++..+.
T Consensus       208 ~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---~~~~~~~~~~~~~~~~  265 (336)
T TIGR02817       208 QLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDP---AELDISPFKRKSISLH  265 (336)
T ss_pred             HHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEccc---ccccchhhhhcceEEE
Confidence            333333 36999999987655689999999999999998532   2344444444444443

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.6e-32  Score=250.75  Aligned_cols=269  Identities=23%  Similarity=0.292  Sum_probs=211.0

Q ss_pred             ccchhhhccCCCCccceee-eeecCCCCCeEEEEEeeeccChhhhhhHhcCCC--------------------CCCCCCc
Q 021300           11 KNAFGWAAKDTSGVLSPFH-FSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG--------------------NTIYPIV   69 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~-~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~--------------------~~~~p~~   69 (314)
                      ||++.+...+.+..+++.+ .+.|.+.+++|+|||.++++|++|+.+..|.++                    ...+|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            5677776555455555543 477788999999999999999999988776542                    2356889


Q ss_pred             ccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCce
Q 021300           70 PGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV  149 (314)
Q Consensus        70 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~  149 (314)
                      +|||++|+|+++|+++++|++||+|++.+.. +|+.|..|..     |..          .+....|++++|+.++...+
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~-----~~~----------~~~~~~g~~~~~~~v~~~~~  144 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARIGERVLVDPSI-RDPPEDDPAD-----IDY----------IGSERDGGFAEYTVVPAENA  144 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCCCCEEEEecCc-CCCCcccccc-----ccc----------cCCCCCccceEEEEecHHHc
Confidence            9999999999999999999999999765444 5776665421     110          11224689999999999999


Q ss_pred             EECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC
Q 021300          150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG  228 (314)
Q Consensus       150 ~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g  228 (314)
                      +++|+++++++++.+++.+.|||+++. ...+++|+++||+|+ |++|++++++++.+|+++++++++. ++ +.++++|
T Consensus       145 ~~ip~~~~~~~~a~l~~~~~ta~~~~~-~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~-~~~~~~g  221 (350)
T cd08274         145 YPVNSPLSDVELATFPCSYSTAENMLE-RAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KE-EAVRALG  221 (350)
T ss_pred             eeCCCCCCHHHHHhcccHHHHHHHHHh-hcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hh-HHHHhcC
Confidence            999999999999999999999999984 455899999999998 9999999999999999998887664 55 4457899


Q ss_pred             CcEEecCCCHHHH-HHHc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-cccchhhhhcCceeEe
Q 021300          229 ADSFLVSRDQDEM-QAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGEEEDS  299 (314)
Q Consensus       229 a~~~v~~~~~~~~-~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~~~~~~~~~~~~~~i~  299 (314)
                      ++.+++....... .+..  .++|++||++|+. .+..++++++++|+++.+|....+ ..++...++.++.++.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  295 (350)
T cd08274         222 ADTVILRDAPLLADAKALGGEPVDVVADVVGGP-LFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLF  295 (350)
T ss_pred             CeEEEeCCCccHHHHHhhCCCCCcEEEecCCHH-HHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEE
Confidence            9766555443221 2222  3699999999986 489999999999999999976544 5677777677777765

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=2.9e-32  Score=249.87  Aligned_cols=275  Identities=21%  Similarity=0.329  Sum_probs=215.3

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCC---CCCCCCCcccccccEEEEEeCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW---GNTIYPIVPGHEIVGVVTEVGSKVSK   87 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~v~~   87 (314)
                      ||++.+...+  ..+++.+.+.|+|.++|++|||.++++|+.|...+.+..   +...+|.++|+|++|+|+.+|++++.
T Consensus         1 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~   78 (341)
T cd05281           1 MKAIVKTKAG--PGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTR   78 (341)
T ss_pred             CcceEEecCC--CceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCC
Confidence            5666666533  258889999999999999999999999999988754421   12245678999999999999999999


Q ss_pred             CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (314)
Q Consensus        88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~  167 (314)
                      +++||+|+..+.+ +|+.|.+|..+++|+|+...  +.+     ....|+|++|+.++.+.++++|++++.+.+ .++..
T Consensus        79 ~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~  149 (341)
T cd05281          79 VKVGDYVSAETHI-VCGKCYQCRTGNYHVCQNTK--ILG-----VDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEP  149 (341)
T ss_pred             CCCCCEEEECCcc-CCCCChHHHCcCcccCcccc--eEe-----ccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhH
Confidence            9999999876444 99999999999999997642  222     235689999999999999999999988544 56777


Q ss_pred             hhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHH--HHHH
Q 021300          168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE--MQAA  244 (314)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~--~~~~  244 (314)
                      +.++++++.  ...++|++|||.|+|.+|++++++++.+|+ +++++.+++ ++..+.+++|++.+++++..+.  +.+.
T Consensus       150 ~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~  226 (341)
T cd05281         150 LGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNP-YRLELAKKMGADVVINPREEDVVEVKSV  226 (341)
T ss_pred             HHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCH-HHHHHHHHhCcceeeCcccccHHHHHHH
Confidence            788888775  235899999998889999999999999999 677775554 4446777899988887655433  3333


Q ss_pred             cC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchh-hhhcCceeEe
Q 021300          245 MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAF-SLLMGEEEDS  299 (314)
Q Consensus       245 ~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~-~~~~~~~~i~  299 (314)
                      .+  ++|++||++|.......++++|+++|+++.+|..+....++.. .+..++..+.
T Consensus       227 ~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  284 (341)
T cd05281         227 TDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQ  284 (341)
T ss_pred             cCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEE
Confidence            33  6999999998766688999999999999999876544444332 3555666554

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-32  Score=250.93  Aligned_cols=251  Identities=19%  Similarity=0.172  Sum_probs=196.5

Q ss_pred             ccchhhhccC----CCCccceeee---eec-CCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccc--cccEEEEE
Q 021300           11 KNAFGWAAKD----TSGVLSPFHF---SRR-ATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGH--EIVGVVTE   80 (314)
Q Consensus        11 ~~~~~~~~~~----~~~~~~~~~~---~~p-~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~--e~~G~V~~   80 (314)
                      .|.+.+....    .+..|++++.   +.| ++++|||||||.++++|+.|...+.+.......|+++|+  |++|+|..
T Consensus         9 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~v~~   88 (348)
T PLN03154          9 NKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGVSKV   88 (348)
T ss_pred             ceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEEEEE
Confidence            4555554432    3456777663   555 347999999999999999987654332222245889998  88999999


Q ss_pred             eCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCc--eE--ECCCCC
Q 021300           81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF--VV--RIPEGT  156 (314)
Q Consensus        81 vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~--~~--~~p~~~  156 (314)
                      +|+++++|++||+|+                                      ..|+|+||+.++...  ++  ++|+++
T Consensus        89 vg~~v~~~~~Gd~V~--------------------------------------~~~~~aey~~v~~~~~~~~~~~~P~~~  130 (348)
T PLN03154         89 VDSDDPNFKPGDLIS--------------------------------------GITGWEEYSLIRSSDNQLRKIQLQDDI  130 (348)
T ss_pred             EecCCCCCCCCCEEE--------------------------------------ecCCcEEEEEEeccccceEEccCcCCC
Confidence            999999999999996                                      236799999998753  54  459999


Q ss_pred             Ccc-cccccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEec
Q 021300          157 PLD-ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV  234 (314)
Q Consensus       157 ~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~  234 (314)
                      +++ +++.++++..|||+++.....+++|++|||+|+ |++|++++|+||.+|++++++++++++.+.+.+++|++.+++
T Consensus       131 ~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~  210 (348)
T PLN03154        131 PLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFN  210 (348)
T ss_pred             CHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEE
Confidence            986 677899999999999977777899999999998 999999999999999999888888877755544799999998


Q ss_pred             CCCH-H---HHHHHcC-CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-c-----ccchhhhhcCceeEee
Q 021300          235 SRDQ-D---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-L-----ELPAFSLLMGEEEDSW  300 (314)
Q Consensus       235 ~~~~-~---~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~-----~~~~~~~~~~~~~i~~  300 (314)
                      +++. +   .+.+..+ ++|++||++|+. .+..++++++++|+++.+|..++. .     .++...++.+++++.+
T Consensus       211 ~~~~~~~~~~i~~~~~~gvD~v~d~vG~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g  286 (348)
T PLN03154        211 YKEEPDLDAALKRYFPEGIDIYFDNVGGD-MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQG  286 (348)
T ss_pred             CCCcccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEE
Confidence            7642 2   3333333 799999999986 589999999999999999976432 2     1355667778888763

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=5.4e-32  Score=247.07  Aligned_cols=274  Identities=28%  Similarity=0.439  Sum_probs=222.1

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      ||++++..+   +.+++.+++.|++.++||+|||.++++|+.|.....|.++. .+|.++|+|++|+|+++|++++++++
T Consensus         1 ~~a~~~~~~---~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~   76 (334)
T cd08234           1 MKALVYEGP---GELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKV   76 (334)
T ss_pred             CeeEEecCC---CceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCC
Confidence            567776543   35888999999999999999999999999999988876653 47889999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  170 (314)
                      ||+|+..+.. .|++|.+|..+..+.|+...+.       +....|++++|+.++.+.++++|+++++.+++.+ ..+.+
T Consensus        77 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~  147 (334)
T cd08234          77 GDRVAVDPNI-YCGECFYCRRGRPNLCENLTAV-------GVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSC  147 (334)
T ss_pred             CCEEEEcCCc-CCCCCccccCcChhhCCCccee-------ccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHH
Confidence            9999876655 5999999999999999876421       2235689999999999999999999999988765 67788


Q ss_pred             hhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHHHH--HHHc-C
Q 021300          171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDEM--QAAM-G  246 (314)
Q Consensus       171 a~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~--~~~~-~  246 (314)
                      +++++ ...++++|+++||+|+|.+|.+++++|+..|++ ++++++++++...+ +++|++.+++.+..+..  .... +
T Consensus       148 a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~  225 (334)
T cd08234         148 AVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELA-KKLGATETVDPSREDPEAQKEDNPY  225 (334)
T ss_pred             HHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCeEEecCCCCCHHHHHHhcCC
Confidence            89888 556689999999998899999999999999997 77777777766555 78898888877654322  2222 3


Q ss_pred             CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC--CcccchhhhhcCceeEe
Q 021300          247 TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGEEEDS  299 (314)
Q Consensus       247 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~--~~~~~~~~~~~~~~~i~  299 (314)
                      ++|+++|++|.......++++|+++|+++.+|....  ...++...+..+++.+.
T Consensus       226 ~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  280 (334)
T cd08234         226 GFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTII  280 (334)
T ss_pred             CCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEE
Confidence            699999999876668899999999999999987643  34455555444555554

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=3.2e-32  Score=247.94  Aligned_cols=237  Identities=20%  Similarity=0.189  Sum_probs=191.1

Q ss_pred             hccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEe
Q 021300           17 AAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV   96 (314)
Q Consensus        17 ~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~   96 (314)
                      ..++.++.+++.+.+.|+|++|||||||.++++|+.+.   .|.+.....|.++|.|++|+|+++|+   .|++||||+.
T Consensus        11 ~~~~~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~   84 (325)
T TIGR02825        11 VGYPTDSDFELKTVELPPLNNGEVLLEALFLSVDPYMR---VAAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLA   84 (325)
T ss_pred             CCCCCCCceEEEeccCCCCCCCcEEEEEEEEecCHHHh---cccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEE
Confidence            44466788889999999999999999999999999654   33333334578999999999999874   5999999972


Q ss_pred             cccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEEC----CCCCCcccc-cccchhhhhh
Q 021300           97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI----PEGTPLDAT-APLLCAGITV  171 (314)
Q Consensus        97 ~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~----p~~~~~~~a-a~~~~~~~ta  171 (314)
                                                            .++|++|+.++...+.++    |++++++++ +++++++.||
T Consensus        85 --------------------------------------~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA  126 (325)
T TIGR02825        85 --------------------------------------SPGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTA  126 (325)
T ss_pred             --------------------------------------ecCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHH
Confidence                                                  136899999999888777    899999987 6789999999


Q ss_pred             hhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH-H---HHHHHc-
Q 021300          172 YSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-D---EMQAAM-  245 (314)
Q Consensus       172 ~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~-~---~~~~~~-  245 (314)
                      |+++.....+++|++|||+|+ |++|++++|+|+..|++++++++++++.+.+ +++|++.++++++. +   .+.... 
T Consensus       127 ~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~lGa~~vi~~~~~~~~~~~~~~~~~  205 (325)
T TIGR02825       127 YFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKLGFDVAFNYKTVKSLEETLKKASP  205 (325)
T ss_pred             HHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeccccccHHHHHHHhCC
Confidence            999877777899999999996 9999999999999999999988888776555 78999999988753 2   233333 


Q ss_pred             CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-----Ccc--cchhhhhcCceeEe
Q 021300          246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-----PLE--LPAFSLLMGEEEDS  299 (314)
Q Consensus       246 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-----~~~--~~~~~~~~~~~~i~  299 (314)
                      +++|++||++|+.. +..++++++++|+++.+|....     +..  .....++.+++++.
T Consensus       206 ~gvdvv~d~~G~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~  265 (325)
T TIGR02825       206 DGYDCYFDNVGGEF-SNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRME  265 (325)
T ss_pred             CCeEEEEECCCHHH-HHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEe
Confidence            36999999999875 7999999999999999997532     111  12334555666665

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=1.6e-31  Score=244.86  Aligned_cols=265  Identities=22%  Similarity=0.293  Sum_probs=210.5

Q ss_pred             CccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCC---CCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEeccc
Q 021300           23 GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW---GNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM   99 (314)
Q Consensus        23 ~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~   99 (314)
                      ..+++++++.|.|+++||+|||.++++|+.|+..+.+..   ....+|.++|+|++|+|+++|+++++|++||+|+..+.
T Consensus         9 ~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~   88 (340)
T TIGR00692         9 YGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETH   88 (340)
T ss_pred             CCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCc
Confidence            347888999999999999999999999999988765431   12245778999999999999999999999999976544


Q ss_pred             ccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhcC
Q 021300          100 VGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYG  179 (314)
Q Consensus       100 ~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~  179 (314)
                      . .|+.|..|..+..+.|++..+.       +....|+|++|+.++.+.++++|++++++++ +++..+.++++++.  .
T Consensus        89 ~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~~--~  157 (340)
T TIGR00692        89 I-VCGKCYACRRGQYHVCQNTKIF-------GVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTVL--A  157 (340)
T ss_pred             C-CCCCChhhhCcChhhCcCcceE-------eecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHHH--c
Confidence            4 8999999999999999986432       1225689999999999999999999998654 56778888888762  3


Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHHc--CCccEEEE
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAM--GTMDGIID  253 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~--~~~d~v~d  253 (314)
                      ..++|++++|.|+|++|.+++|+++.+|++ ++++.++ +++.++.+++|++.++++...+.   +.+..  +++|+++|
T Consensus       158 ~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~-~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld  236 (340)
T TIGR00692       158 GPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPN-EYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLE  236 (340)
T ss_pred             cCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCC-HHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEE
Confidence            368999999988899999999999999997 6666444 45556668899988887765433   33333  36999999


Q ss_pred             ccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchh-hhhcCceeEe
Q 021300          254 TVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAF-SLLMGEEEDS  299 (314)
Q Consensus       254 ~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~-~~~~~~~~i~  299 (314)
                      ++|....+...+++|+++|+++.+|.......++.. .++.+...+.
T Consensus       237 ~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~  283 (340)
T TIGR00692       237 MSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIY  283 (340)
T ss_pred             CCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEE
Confidence            998766688999999999999999976443344333 4555666654

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=1.3e-31  Score=245.30  Aligned_cols=253  Identities=24%  Similarity=0.298  Sum_probs=208.5

Q ss_pred             ccchhhhccCCC-CccceeeeeecCCCC-CeEEEEEeeeccChhhhhhHhcCCCCC-C----CCCcccccccEEEEEeCC
Q 021300           11 KNAFGWAAKDTS-GVLSPFHFSRRATGE-KDVTFKVTHCGICHSDLHMIKNEWGNT-I----YPIVPGHEIVGVVTEVGS   83 (314)
Q Consensus        11 ~~~~~~~~~~~~-~~~~~~~~~~p~~~~-~eVlVkv~a~~l~~~d~~~~~~~~~~~-~----~p~~~G~e~~G~V~~vG~   83 (314)
                      ||++.+...+.+ +.+++++.|.|+|.+ +||+||+.++++|+.|...+.+..+.. .    .|.++|||++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            778888765443 357888999999888 999999999999999999887765422 2    677999999999999999


Q ss_pred             CCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccc
Q 021300           84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAP  163 (314)
Q Consensus        84 ~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~  163 (314)
                      ++..|++||+|+...                                  ...|+|++|+.++...++++|+++++++++.
T Consensus        81 ~v~~~~~Gd~V~~~~----------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~  126 (341)
T cd08290          81 GVKSLKPGDWVIPLR----------------------------------PGLGTWRTHAVVPADDLIKVPNDVDPEQAAT  126 (341)
T ss_pred             CCCCCCCCCEEEecC----------------------------------CCCccchheEeccHHHeEeCCCCCCHHHHHH
Confidence            999999999997421                                  1258999999999999999999999999999


Q ss_pred             cchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh----hhHHHHHHHcCCcEEecCCCH
Q 021300          164 LLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP----SKKSEAIERLGADSFLVSRDQ  238 (314)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~----~~~~~~~~~~ga~~~v~~~~~  238 (314)
                      +++.+.|+|+++.....+++|++|||+|+ |++|++++++|+..|+++++++++.    ++. +.++++|++.+++++..
T Consensus       127 ~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~  205 (341)
T cd08290         127 LSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELK-ERLKALGADHVLTEEEL  205 (341)
T ss_pred             hhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHH-HHHHhcCCCEEEeCccc
Confidence            99999999999987777899999999987 9999999999999999999888876    334 44478999998877653


Q ss_pred             ---H---HHHHHcC-CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEe
Q 021300          239 ---D---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDS  299 (314)
Q Consensus       239 ---~---~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~  299 (314)
                         +   .+....+ ++|++||++|+.. +..++++++++|+++.+|.... +..++....+.++.++.
T Consensus       206 ~~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  273 (341)
T cd08290         206 RSLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLR  273 (341)
T ss_pred             ccccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEE
Confidence               2   2333333 6999999999875 7789999999999999986542 34566656666777766

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.1e-31  Score=234.00  Aligned_cols=249  Identities=34%  Similarity=0.508  Sum_probs=207.9

Q ss_pred             eEEEEEeeeccChhhhhhHhcCCC-CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCC
Q 021300           39 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYC  117 (314)
Q Consensus        39 eVlVkv~a~~l~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c  117 (314)
                      ||+|||.++++|+.|+..+.+..+ ....|.++|+|++|+|+++|++++.|++||+|+..+.. .|+.|.+|..    .|
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~----~~   75 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNL-GCGTCELCRE----LC   75 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCC-CCCCCHHHHh----hC
Confidence            689999999999999998887664 34567899999999999999999999999999876554 8999999997    67


Q ss_pred             CccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHH
Q 021300          118 PKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGH  197 (314)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~  197 (314)
                      +...+.       +....|++++|+.++.+.++++|+++++++++.++..+.+||+++.....+++|+++||+|+|++|+
T Consensus        76 ~~~~~~-------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~  148 (271)
T cd05188          76 PGGGIL-------GEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGL  148 (271)
T ss_pred             CCCCEe-------ccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHH
Confidence            665432       3446799999999999999999999999999999999999999998888779999999999866999


Q ss_pred             HHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHH----cCCccEEEEccCCcccHHHHHHhhccCCE
Q 021300          198 VAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA----MGTMDGIIDTVSAVHPLMPLIGLLKSQGK  273 (314)
Q Consensus       198 ~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~----~~~~d~v~d~~g~~~~~~~~~~~l~~~G~  273 (314)
                      +++++++..|.+++++++++++.+.+ +++|++.+++..+.+....+    .+++|+++++++.......++++++++|+
T Consensus       149 ~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~  227 (271)
T cd05188         149 LAAQLAKAAGARVIVTDRSDEKLELA-KELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGR  227 (271)
T ss_pred             HHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCE
Confidence            99999999999999998887776554 77888888877665433322    24799999999984458999999999999


Q ss_pred             EEEEcCCCCCcccc-hhhhhcCceeEee
Q 021300          274 LVLVGAPEKPLELP-AFSLLMGEEEDSW  300 (314)
Q Consensus       274 ~v~~G~~~~~~~~~-~~~~~~~~~~i~~  300 (314)
                      ++.+|......... ....+.+++++.+
T Consensus       228 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (271)
T cd05188         228 IVVVGGTSGGPPLDDLRRLLFKELTIIG  255 (271)
T ss_pred             EEEEccCCCCCCcccHHHHHhcceEEEE
Confidence            99999876433332 4556777888763

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=1.5e-31  Score=243.51  Aligned_cols=245  Identities=19%  Similarity=0.159  Sum_probs=194.2

Q ss_pred             cccchhhhcc--CCC--CccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCC
Q 021300           10 PKNAFGWAAK--DTS--GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKV   85 (314)
Q Consensus        10 ~~~~~~~~~~--~~~--~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   85 (314)
                      .|+++.+...  +++  ..+++++.+.|+|+++||||||++++||+.|.....   ....+|.++|+|++|+|++   .+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~---~~~~~p~v~G~e~~G~V~~---~~   75 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSK---RLNEGDTMIGTQVAKVIES---KN   75 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhcccc---cCCCCCcEecceEEEEEec---CC
Confidence            4788888772  343  778899999999999999999999999988754221   1124688999999999995   45


Q ss_pred             CCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC---ceEECCCCCC--c--
Q 021300           86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH---FVVRIPEGTP--L--  158 (314)
Q Consensus        86 ~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~---~~~~~p~~~~--~--  158 (314)
                      +.|++||||+.                                      .++|++|+.++..   .++++|++++  +  
T Consensus        76 ~~~~~Gd~V~~--------------------------------------~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~  117 (329)
T cd08294          76 SKFPVGTIVVA--------------------------------------SFGWRTHTVSDGKDQPDLYKLPADLPDDLPP  117 (329)
T ss_pred             CCCCCCCEEEe--------------------------------------eCCeeeEEEECCccccceEECCccccccCCh
Confidence            67999999962                                      2468999999999   9999999998  2  


Q ss_pred             -ccccccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCC
Q 021300          159 -DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR  236 (314)
Q Consensus       159 -~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~  236 (314)
                       ..++.+++++.|||+++....++++|+++||+|+ |++|++++|+|+.+|++++++++++++.+.+ +++|++.+++++
T Consensus       118 ~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l-~~~Ga~~vi~~~  196 (329)
T cd08294         118 SLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL-KELGFDAVFNYK  196 (329)
T ss_pred             HHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeCC
Confidence             2224678899999999977777899999999986 9999999999999999999888888776444 679999999987


Q ss_pred             CHHHH---HHHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC---C----cccchhhhhcCceeEee
Q 021300          237 DQDEM---QAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK---P----LELPAFSLLMGEEEDSW  300 (314)
Q Consensus       237 ~~~~~---~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~---~----~~~~~~~~~~~~~~i~~  300 (314)
                      +.+..   .+.. +++|++||++|+. .+..++++++++|+++.+|....   +    .......++.+++++.+
T Consensus       197 ~~~~~~~v~~~~~~gvd~vld~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  270 (329)
T cd08294         197 TVSLEEALKEAAPDGIDCYFDNVGGE-FSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEG  270 (329)
T ss_pred             CccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEE
Confidence            75443   3333 3799999999985 58999999999999999986422   1    12223445667777663

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=99.98  E-value=4.4e-31  Score=240.45  Aligned_cols=237  Identities=24%  Similarity=0.333  Sum_probs=205.2

Q ss_pred             cccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      .|+++.+..++.+..+++++++.|.++++||+|||.++|+|++|+....+.++...+|.++|+|++|+|+.+|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~   80 (327)
T PRK10754          1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK   80 (327)
T ss_pred             CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence            48889998888888899999999999999999999999999999988877665455788999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||+|+...                                  ...|+|++|+.++.+.++++|+++++++++.+++...
T Consensus        81 ~Gd~V~~~~----------------------------------~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~  126 (327)
T PRK10754         81 VGDRVVYAQ----------------------------------SALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGL  126 (327)
T ss_pred             CCCEEEECC----------------------------------CCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHH
Confidence            999996311                                  1348899999999999999999999999998889999


Q ss_pred             hhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHHc
Q 021300          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM  245 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~~~  245 (314)
                      ++|.++.....+++|++++|+|+ |.+|++++++++.+|++++.++++++++..+ +++|++.+++.+..+   .+.+..
T Consensus       127 ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~  205 (327)
T PRK10754        127 TVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA-KKAGAWQVINYREENIVERVKEIT  205 (327)
T ss_pred             HHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHCCCCEEEcCCCCcHHHHHHHHc
Confidence            99999887777899999999976 9999999999999999999999888877555 789998888776543   333443


Q ss_pred             C--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300          246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       246 ~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      .  ++|+++|++|+. .....++.++++|+++.+|....
T Consensus       206 ~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~  243 (327)
T PRK10754        206 GGKKVRVVYDSVGKD-TWEASLDCLQRRGLMVSFGNASG  243 (327)
T ss_pred             CCCCeEEEEECCcHH-HHHHHHHHhccCCEEEEEccCCC
Confidence            3  699999999986 48889999999999999997653

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=99.98  E-value=2.6e-30  Score=234.74  Aligned_cols=256  Identities=23%  Similarity=0.273  Sum_probs=206.8

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ||++++..++++.++++++++.|.+.++||+|||.++++|++|+..+.|.++. ...|.++|||++|+|+++  +++.|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~   78 (325)
T cd05280           1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR   78 (325)
T ss_pred             CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence            67888887666567899999999999999999999999999999888776542 235788999999999999  456799


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||+|+..+.                             ..+....|+|++|+.++.+.++++|+++++++++.+++.+.
T Consensus        79 ~Gd~V~~~~~-----------------------------~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~  129 (325)
T cd05280          79 EGDEVLVTGY-----------------------------DLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGF  129 (325)
T ss_pred             CCCEEEEccc-----------------------------ccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHH
Confidence            9999974210                             01223468999999999999999999999999999999999


Q ss_pred             hhhhhhHhcCCC--C-CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH--HHHH
Q 021300          170 TVYSPLRFYGLD--K-PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQA  243 (314)
Q Consensus       170 ta~~~l~~~~~~--~-~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~--~~~~  243 (314)
                      ++|.++....+.  . .+++|+|+|+ |.+|++++++|+.+|++++++++++++++.+ +++|++.+++.++.+  ....
T Consensus       130 ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~  208 (325)
T cd05280         130 TAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL-KSLGASEVLDREDLLDESKKP  208 (325)
T ss_pred             HHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEEEcchhHHHHHHHH
Confidence            999998665433  4 4579999998 9999999999999999999998888777555 789999988876542  2222


Q ss_pred             Hc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEe
Q 021300          244 AM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDS  299 (314)
Q Consensus       244 ~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~  299 (314)
                      .. +++|+++|++|+. .+..++++++++|+++.+|.... +..++...+..++.++.
T Consensus       209 ~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~  265 (325)
T cd05280         209 LLKARWAGAIDTVGGD-VLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLL  265 (325)
T ss_pred             hcCCCccEEEECCchH-HHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEE
Confidence            22 3699999999986 58999999999999999997643 33455555555676665

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.98  E-value=3.3e-30  Score=234.88  Aligned_cols=273  Identities=26%  Similarity=0.321  Sum_probs=220.0

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ||++++...+....+++++.+.|.++++|++||+.++++|++|+....+.++. ...|.++|||++|+|+++|+.+++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK   80 (336)
T ss_pred             CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence            67888876655667888888888899999999999999999999988776542 34678999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||+|+..... .|      ..+.+..|...  .++     +....|++++|+.++.+.++++|+++++.+++.+++.+.
T Consensus        81 ~Gd~V~~~~~~-~~------~~~~~~~~~~~--~~~-----~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~  146 (336)
T cd08276          81 VGDRVVPTFFP-NW------LDGPPTAEDEA--SAL-----GGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGL  146 (336)
T ss_pred             CCCEEEEeccc-cc------ccccccccccc--ccc-----ccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHH
Confidence            99999764432 33      33444444321  111     233578999999999999999999999999999999999


Q ss_pred             hhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCC-HH---HHHHHc
Q 021300          170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-QD---EMQAAM  245 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~-~~---~~~~~~  245 (314)
                      +||+++.....+++|++++|+|+|++|++++++++..|++++++++++++++.+ +++|++.+++.+. ++   .+.+..
T Consensus       147 ~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~  225 (336)
T cd08276         147 TAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGARVIATSSSDEKLERA-KALGADHVINYRTTPDWGEEVLKLT  225 (336)
T ss_pred             HHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEcCCcccCHHHHHHHHc
Confidence            999999877778999999999889999999999999999999999888877666 4589988888765 32   344444


Q ss_pred             C--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-cccchhhhhcCceeEe
Q 021300          246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGEEEDS  299 (314)
Q Consensus       246 ~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~~~~~~~~~~~~~~i~  299 (314)
                      +  ++|+++|+++.. .+..++++++++|+++.+|..... ..+....++.++.++.
T Consensus       226 ~~~~~d~~i~~~~~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  281 (336)
T cd08276         226 GGRGVDHVVEVGGPG-TLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLR  281 (336)
T ss_pred             CCCCCcEEEECCChH-HHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEE
Confidence            3  799999999866 488999999999999999976542 3455666677777776

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=99.98  E-value=1.7e-30  Score=236.27  Aligned_cols=257  Identities=22%  Similarity=0.281  Sum_probs=205.2

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCC-CCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW-GNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ||++.+...+++..+++++.+.|.|.++||+||+.++++|++|.....+.. ....+|.++|||++|+|+++|  +++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~   78 (326)
T cd08289           1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK   78 (326)
T ss_pred             CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence            678888776666678889999999999999999999999999987654311 123568899999999999964  56799


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||+|+..+.                             ..+....|+|++|+.++.+.++++|+++++++++.+++...
T Consensus        79 ~Gd~V~~~~~-----------------------------~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~  129 (326)
T cd08289          79 PGDEVIVTSY-----------------------------DLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGF  129 (326)
T ss_pred             CCCEEEEccc-----------------------------ccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHH
Confidence            9999975321                             01223579999999999999999999999999999999999


Q ss_pred             hhhhhhHhcCC---CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH--HHHHH
Q 021300          170 TVYSPLRFYGL---DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ--DEMQA  243 (314)
Q Consensus       170 ta~~~l~~~~~---~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~--~~~~~  243 (314)
                      |||.++....+   ...+++|||+|+ |++|.+++++|+.+|++++++++++++.+.+ +++|++.+++.++.  +.+.+
T Consensus       130 ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~  208 (326)
T cd08289         130 TAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKLGAKEVIPREELQEESIKP  208 (326)
T ss_pred             HHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHcCCCEEEcchhHHHHHHHh
Confidence            99988754332   345789999998 9999999999999999999999998877555 78999888887654  22333


Q ss_pred             Hc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEee
Q 021300          244 AM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       244 ~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~~  300 (314)
                      .. .++|+++|++|+. .+...+++++++|+++.+|..+. ..+++...++.+++.+..
T Consensus       209 ~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~  266 (326)
T cd08289         209 LEKQRWAGAVDPVGGK-TLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLG  266 (326)
T ss_pred             hccCCcCEEEECCcHH-HHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEE
Confidence            33 3699999999985 58999999999999999997643 345455666667777763

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=99.98  E-value=2.7e-30  Score=234.51  Aligned_cols=253  Identities=26%  Similarity=0.302  Sum_probs=206.6

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC---CCCCCcccccccEEEEEeCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN---TIYPIVPGHEIVGVVTEVGSKVSK   87 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~---~~~p~~~G~e~~G~V~~vG~~v~~   87 (314)
                      ||++.+...+.+..+++.+.+.|.+.++||+|||.++++|+.|+....|..+.   ...|.++|+|++|+|+++|++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~   80 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP   80 (324)
T ss_pred             CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence            67777766555666777777778889999999999999999999888775432   355788999999999999999999


Q ss_pred             CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (314)
Q Consensus        88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~  167 (314)
                      +++||+|+....                                 ...|+|++|+.++...++++|+++++++++.+++.
T Consensus        81 ~~~Gd~V~~~~~---------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~  127 (324)
T cd08244          81 AWLGRRVVAHTG---------------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHD  127 (324)
T ss_pred             CCCCCEEEEccC---------------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcch
Confidence            999999974210                                 13689999999999999999999999999999999


Q ss_pred             hhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHH
Q 021300          168 GITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQA  243 (314)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~  243 (314)
                      +.||| ++.....++++++++|+|+ |.+|.+++++|+.+|++++++++++++.+.+ +++|++.++++++.+.   +.+
T Consensus       128 ~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~  205 (324)
T cd08244         128 GRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RALGADVAVDYTRPDWPDQVRE  205 (324)
T ss_pred             HHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCCEEEecCCccHHHHHHH
Confidence            99995 4444566899999999996 9999999999999999999998888877655 7899988888776543   333


Q ss_pred             HcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEe
Q 021300          244 AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDS  299 (314)
Q Consensus       244 ~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~  299 (314)
                      ..+  ++|+++|++|+.. ...++++++++|+++.+|.... +..++...++.++..+.
T Consensus       206 ~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~  263 (324)
T cd08244         206 ALGGGGVTVVLDGVGGAI-GRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVV  263 (324)
T ss_pred             HcCCCCceEEEECCChHh-HHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEE
Confidence            333  6999999999875 7899999999999999997653 23455455566666665

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=99.98  E-value=3.3e-30  Score=234.73  Aligned_cols=232  Identities=26%  Similarity=0.345  Sum_probs=200.4

Q ss_pred             cccchhhhccCC--CCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCC
Q 021300           10 PKNAFGWAAKDT--SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVS   86 (314)
Q Consensus        10 ~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~   86 (314)
                      .||++.+..+++  ++.+++++++.|.+.++||+|||.++++|+.|+....+.+.. ..+|.++|+|++|+|+++|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~   80 (329)
T cd08250           1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT   80 (329)
T ss_pred             CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence            388999988877  888999999999999999999999999999999988776542 46788999999999999999999


Q ss_pred             CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccch
Q 021300           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC  166 (314)
Q Consensus        87 ~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~  166 (314)
                      ++++||+|+.                                    ...|+|++|+.++.+.++++|+.  +.+++.+++
T Consensus        81 ~~~~Gd~V~~------------------------------------~~~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~  122 (329)
T cd08250          81 DFKVGDAVAT------------------------------------MSFGAFAEYQVVPARHAVPVPEL--KPEVLPLLV  122 (329)
T ss_pred             CCCCCCEEEE------------------------------------ecCcceeEEEEechHHeEECCCC--cchhhhccc
Confidence            9999999974                                    13589999999999999999987  356778999


Q ss_pred             hhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HH
Q 021300          167 AGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQ  242 (314)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~  242 (314)
                      ++.+||+++.....+++|++++|+|+ |.+|++++++++..|++++++++++++...+ +++|++.+++....+.   +.
T Consensus       123 ~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~  201 (329)
T cd08250         123 SGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSLGCDRPINYKTEDLGEVLK  201 (329)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHcCCceEEeCCCccHHHHHH
Confidence            99999999987777899999999996 9999999999999999999999888777666 7799988887665432   22


Q ss_pred             HHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          243 AAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       243 ~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      ... +++|++||++|+. .+..++++++++|+++.+|...
T Consensus       202 ~~~~~~vd~v~~~~g~~-~~~~~~~~l~~~g~~v~~g~~~  240 (329)
T cd08250         202 KEYPKGVDVVYESVGGE-MFDTCVDNLALKGRLIVIGFIS  240 (329)
T ss_pred             HhcCCCCeEEEECCcHH-HHHHHHHHhccCCeEEEEeccc
Confidence            222 3699999999975 5899999999999999998764

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=99.98  E-value=1.7e-30  Score=236.69  Aligned_cols=253  Identities=24%  Similarity=0.292  Sum_probs=210.3

Q ss_pred             cccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCC
Q 021300           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKF   88 (314)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~   88 (314)
                      +||++++...+....+++.+.+.|.+.++||+|||.++++|+.|.....+.++. ...|.++|+|++|+|+++|++++.+
T Consensus         1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~   80 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF   80 (334)
T ss_pred             CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            489999887666666777788888899999999999999999998888775532 3456789999999999999999999


Q ss_pred             CCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhh
Q 021300           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG  168 (314)
Q Consensus        89 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~  168 (314)
                      ++||+|+..                                   ..+|++++|+.++.+.++++|+++++++++.+++.+
T Consensus        81 ~~Gd~V~~~-----------------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~  125 (334)
T PTZ00354         81 KEGDRVMAL-----------------------------------LPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAF  125 (334)
T ss_pred             CCCCEEEEe-----------------------------------cCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHH
Confidence            999999631                                   135899999999999999999999999999999999


Q ss_pred             hhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH-H---HHH
Q 021300          169 ITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD-E---MQA  243 (314)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~-~---~~~  243 (314)
                      .+||+++.....+++|++++|+|+ |.+|++++++++..|++++++++++++.+.+ +++|++.+++....+ .   +.+
T Consensus       126 ~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~  204 (334)
T PTZ00354        126 LTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KKLAAIILIRYPDEEGFAPKVKK  204 (334)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEecCChhHHHHHHHH
Confidence            999999987777899999999996 9999999999999999988888888777666 679998888876543 2   333


Q ss_pred             Hc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-Ccc-cchhhhhcCceeEe
Q 021300          244 AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLE-LPAFSLLMGEEEDS  299 (314)
Q Consensus       244 ~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~-~~~~~~~~~~~~i~  299 (314)
                      ..  .++|++||++++. .+..++++++++|+++.+|...+ ... ++...+..+...+.
T Consensus       205 ~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (334)
T PTZ00354        205 LTGEKGVNLVLDCVGGS-YLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASII  263 (334)
T ss_pred             HhCCCCceEEEECCchH-HHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEE
Confidence            33  3699999999876 48899999999999999986543 222 66666666665665

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=99.98  E-value=4.1e-30  Score=233.59  Aligned_cols=256  Identities=24%  Similarity=0.292  Sum_probs=206.6

Q ss_pred             cchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           12 NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      |++++...+.+..++++++|.|.+.++||+||+.++++|+.|+..+.|.++. ..+|.++|||++|+|+.  .++..|++
T Consensus         1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~   78 (323)
T TIGR02823         1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE   78 (323)
T ss_pred             CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence            3455555566678899999999999999999999999999999888876542 25588999999999998  56678999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  170 (314)
                      ||+|+..+.                             ..+....|++++|+.++.+.++++|+++++++++.+++.+.+
T Consensus        79 Gd~V~~~~~-----------------------------~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~t  129 (323)
T TIGR02823        79 GDEVIVTGY-----------------------------GLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFT  129 (323)
T ss_pred             CCEEEEccC-----------------------------CCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHH
Confidence            999975320                             001234689999999999999999999999999999999999


Q ss_pred             hhhhhHhcCC--CCCCC-EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH-HHHHc
Q 021300          171 VYSPLRFYGL--DKPGM-HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE-MQAAM  245 (314)
Q Consensus       171 a~~~l~~~~~--~~~g~-~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~-~~~~~  245 (314)
                      ++.+++....  +.+|+ +++|+|+ |.+|.+++++|+.+|++++++++++++++.+ +++|++.+++.++.+. +....
T Consensus       130 a~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~  208 (323)
T TIGR02823       130 AALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYL-KELGASEVIDREDLSPPGKPLE  208 (323)
T ss_pred             HHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HhcCCcEEEccccHHHHHHHhc
Confidence            9888754433  78898 9999998 9999999999999999999888888877555 7899988888766543 33333


Q ss_pred             -CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEee
Q 021300          246 -GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       246 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~~  300 (314)
                       +++|.++|++|+. .+..++++++++|+++.+|.... +.+++...++.++.++.+
T Consensus       209 ~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  264 (323)
T TIGR02823       209 KERWAGAVDTVGGH-TLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLG  264 (323)
T ss_pred             CCCceEEEECccHH-HHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEE
Confidence             3699999999987 48999999999999999998643 344444555567777663

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=99.97  E-value=7.4e-30  Score=233.05  Aligned_cols=254  Identities=22%  Similarity=0.277  Sum_probs=207.9

Q ss_pred             ccchhhhccCCCC---ccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCC
Q 021300           11 KNAFGWAAKDTSG---VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSK   87 (314)
Q Consensus        11 ~~~~~~~~~~~~~---~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   87 (314)
                      |+++++...+.+.   .++.++++.|++.+++|+||+.++++|+.|+..+.+.++..++|.++|||++|+|+++|+++..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~   80 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL   80 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence            5778888766554   4677788889999999999999999999999887776554456789999999999999999999


Q ss_pred             CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (314)
Q Consensus        88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~  167 (314)
                      |++||+|.....                                ....|+|++|+.++...++++|+++++++++.+++.
T Consensus        81 ~~~Gd~V~~~~~--------------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~  128 (336)
T cd08252          81 FKVGDEVYYAGD--------------------------------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLT  128 (336)
T ss_pred             CCCCCEEEEcCC--------------------------------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhH
Confidence            999999974210                                124689999999999999999999999999999999


Q ss_pred             hhhhhhhhHhcCCCCC-----CCEEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCcEEecCCC--H
Q 021300          168 GITVYSPLRFYGLDKP-----GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRD--Q  238 (314)
Q Consensus       168 ~~ta~~~l~~~~~~~~-----g~~vlI~Ga-g~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~--~  238 (314)
                      +.++|.++.....+.+     |++++|+|+ |++|++++++++.+| ++++++++++++...+ +++|++.+++++.  .
T Consensus       129 ~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~  207 (336)
T cd08252         129 SLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWV-KELGADHVINHHQDLA  207 (336)
T ss_pred             HHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCcEEEeCCccHH
Confidence            9999999876666776     999999986 999999999999999 8999998888777555 7899998888764  1


Q ss_pred             HHHHHHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300          239 DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       239 ~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~  299 (314)
                      ..+.... +++|+++|++|+...+..++++++++|+++.+|...  ..++...+..++..+.
T Consensus       208 ~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~  267 (336)
T cd08252         208 EQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFH  267 (336)
T ss_pred             HHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEE
Confidence            2333333 369999999997556899999999999999998753  3445555545666665

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=99.97  E-value=2.5e-30  Score=236.87  Aligned_cols=241  Identities=26%  Similarity=0.327  Sum_probs=198.4

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      |+++++...+ +..+++++.+.|+|+++||+||+.++++|+.|+....+.+ ...+|.++|+|++|+|+.+|++++.+++
T Consensus         1 m~a~~~~~~~-~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~   78 (339)
T cd08249           1 QKAAVLTGPG-GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKV   78 (339)
T ss_pred             CceEEeccCC-CCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCC
Confidence            6778887654 6778999999999999999999999999999988765543 1235778999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  170 (314)
                      ||+|+..+.. .|+                          +....|+|++|+.++...++++|+++++++++.+++.+.+
T Consensus        79 Gd~V~~~~~~-~~~--------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~t  131 (339)
T cd08249          79 GDRVAGFVHG-GNP--------------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVT  131 (339)
T ss_pred             CCEEEEEecc-ccC--------------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHH
Confidence            9999753311 000                          1234789999999999999999999999999999999999


Q ss_pred             hhhhhHhcCCC----------CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH
Q 021300          171 VYSPLRFYGLD----------KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD  239 (314)
Q Consensus       171 a~~~l~~~~~~----------~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~  239 (314)
                      ||+++.....+          +++++++|+|+ |.+|++++++++.+|++++.++ ++++. +.++++|++.++++++.+
T Consensus       132 a~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~-~~~~~~g~~~v~~~~~~~  209 (339)
T cd08249         132 AALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNF-DLVKSLGADAVFDYHDPD  209 (339)
T ss_pred             HHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccH-HHHHhcCCCEEEECCCch
Confidence            99998765433          78999999997 9999999999999999998877 45555 444889999988887654


Q ss_pred             H---HHHHc-CCccEEEEccCCcccHHHHHHhhcc--CCEEEEEcCCCC
Q 021300          240 E---MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKS--QGKLVLVGAPEK  282 (314)
Q Consensus       240 ~---~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~--~G~~v~~G~~~~  282 (314)
                      .   +.+.. +++|+++|++|+...+..+++++++  +|+++.+|....
T Consensus       210 ~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~  258 (339)
T cd08249         210 VVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPE  258 (339)
T ss_pred             HHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCc
Confidence            3   33333 3699999999984468999999999  999999987654

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=99.97  E-value=1.5e-29  Score=229.48  Aligned_cols=239  Identities=27%  Similarity=0.340  Sum_probs=201.9

Q ss_pred             ccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCCCCCEEEecccccC
Q 021300           24 VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS  102 (314)
Q Consensus        24 ~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~  102 (314)
                      .+++++.+.|++.+++|+|||+++++|+.|...+.+.+.. +..|.++|+|++|+|+++|++++.+++||+|+..+    
T Consensus        13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~----   88 (323)
T cd05282          13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG----   88 (323)
T ss_pred             eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC----
Confidence            5777888899999999999999999999999887765532 35678999999999999999999999999997421    


Q ss_pred             CCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhcCCCC
Q 021300          103 CRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDK  182 (314)
Q Consensus       103 c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~  182 (314)
                                                     ..|+|++|+.++...++++|+++++++++.+++...++|+++.....+.
T Consensus        89 -------------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~  137 (323)
T cd05282          89 -------------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLP  137 (323)
T ss_pred             -------------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCC
Confidence                                           1588999999999999999999999999989899999999988777789


Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHHcC--CccEEEEccC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAMG--TMDGIIDTVS  256 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~~--~~d~v~d~~g  256 (314)
                      +|++++|+|+ |.+|++++++|+.+|++++++++++++.+.+ +++|++.+++++..+.   +.+...  ++|+++|++|
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g  216 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVG  216 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-HhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCC
Confidence            9999999987 9999999999999999999999988877555 7899999988876543   333333  6999999999


Q ss_pred             CcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEe
Q 021300          257 AVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDS  299 (314)
Q Consensus       257 ~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~  299 (314)
                      +.. ....+++++++|+++.+|.... +..++...+..++.++.
T Consensus       217 ~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~  259 (323)
T cd05282         217 GES-ATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVR  259 (323)
T ss_pred             CHH-HHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEE
Confidence            875 7788999999999999987654 34556555554666665

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=9.3e-30  Score=229.23  Aligned_cols=242  Identities=23%  Similarity=0.315  Sum_probs=198.7

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      ||++++...+ |..+++++.+.|.+.++||+||+.++++|+.|......    ...|.++|+|++|+|+++|+++..|++
T Consensus         1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~----~~~~~~~g~e~~G~v~~~G~~v~~~~~   75 (305)
T cd08270           1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAE----RPDGAVPGWDAAGVVERAAADGSGPAV   75 (305)
T ss_pred             CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhcc----CCCCCcccceeEEEEEEeCCCCCCCCC
Confidence            5677776543 66788889999999999999999999999999887542    223678999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  170 (314)
                      ||+|+..                                   ...|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus        76 Gd~V~~~-----------------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~t  120 (305)
T cd08270          76 GARVVGL-----------------------------------GAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVT  120 (305)
T ss_pred             CCEEEEe-----------------------------------cCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHH
Confidence            9999631                                   13689999999999999999999999999999999999


Q ss_pred             hhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCcc
Q 021300          171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD  249 (314)
Q Consensus       171 a~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d  249 (314)
                      ||+++...... +|++++|+|+ |.+|.+++++++..|++++.+++++++...+ +++|++..++... +   ...+++|
T Consensus       121 a~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~-~---~~~~~~d  194 (305)
T cd08270         121 ALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGL-RELGAAEVVVGGS-E---LSGAPVD  194 (305)
T ss_pred             HHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEeccc-c---ccCCCce
Confidence            99999877754 5999999998 9999999999999999999998887776555 6699876554322 1   1124799


Q ss_pred             EEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-Ccccchhhhhc--CceeEe
Q 021300          250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLM--GEEEDS  299 (314)
Q Consensus       250 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~--~~~~i~  299 (314)
                      +++|++|+. .+..++++++++|+++.+|.... ...++...+..  ++..+.
T Consensus       195 ~vl~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  246 (305)
T cd08270         195 LVVDSVGGP-QLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLY  246 (305)
T ss_pred             EEEECCCcH-HHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEE
Confidence            999999987 48999999999999999997643 34556655554  466655

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=99.97  E-value=6.7e-30  Score=234.69  Aligned_cols=235  Identities=26%  Similarity=0.329  Sum_probs=196.6

Q ss_pred             ccchhhhccCCCC-ccceeeeeecCC-CCCeEEEEEeeeccChhhhhhHhcCCC---------------CCCCCCccccc
Q 021300           11 KNAFGWAAKDTSG-VLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWG---------------NTIYPIVPGHE   73 (314)
Q Consensus        11 ~~~~~~~~~~~~~-~~~~~~~~~p~~-~~~eVlVkv~a~~l~~~d~~~~~~~~~---------------~~~~p~~~G~e   73 (314)
                      ||++++..+++++ .+++++.+.|+| .++||+|||+++++|+.|...+.+...               ....|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e   80 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD   80 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence            6777777655543 477889999999 499999999999999999988776321               23568899999


Q ss_pred             ccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECC
Q 021300           74 IVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP  153 (314)
Q Consensus        74 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p  153 (314)
                      ++|+|+++|++++++++||+|+..+..                                ...|+|++|+.++.+.++++|
T Consensus        81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~--------------------------------~~~g~~~~~~~v~~~~~~~lp  128 (350)
T cd08248          81 CSGVVVDIGSGVKSFEIGDEVWGAVPP--------------------------------WSQGTHAEYVVVPENEVSKKP  128 (350)
T ss_pred             eEEEEEecCCCcccCCCCCEEEEecCC--------------------------------CCCccceeEEEecHHHeecCC
Confidence            999999999999999999999753211                                136899999999999999999


Q ss_pred             CCCCcccccccchhhhhhhhhhHhcCCCC----CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC
Q 021300          154 EGTPLDATAPLLCAGITVYSPLRFYGLDK----PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG  228 (314)
Q Consensus       154 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~----~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g  228 (314)
                      +++++++++.+++.+.++|+++.....+.    +|++++|+|+ |.+|++++++++.+|++++++++. + +.++++++|
T Consensus       129 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~-~~~~~~~~g  206 (350)
T cd08248         129 KNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-D-AIPLVKSLG  206 (350)
T ss_pred             CCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-c-hHHHHHHhC
Confidence            99999999999999999999987777665    4999999996 999999999999999998887764 3 456778899


Q ss_pred             CcEEecCCCHHHHHHHc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCC
Q 021300          229 ADSFLVSRDQDEMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       229 a~~~v~~~~~~~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      ++.+++..+.+....+.  +++|++||++|.. ....++++++++|+++.+|..
T Consensus       207 ~~~~~~~~~~~~~~~l~~~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~  259 (350)
T cd08248         207 ADDVIDYNNEDFEEELTERGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSP  259 (350)
T ss_pred             CceEEECCChhHHHHHHhcCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCC
Confidence            98888877655444433  4699999999987 589999999999999999864

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=2.2e-29  Score=227.79  Aligned_cols=238  Identities=23%  Similarity=0.276  Sum_probs=197.4

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      ||++.+...+.+..+++.+.+.|.+.++||+||+.++++|+.|+....+.++....|.++|||++|+|+++|.  ..+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~   78 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP   78 (320)
T ss_pred             CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence            5677776545455677777888888999999999999999999998887665456688999999999999995  57999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  170 (314)
                      ||+|+....                             ..+....|+|++|+.++...++++|+++++++++.+++++.+
T Consensus        79 Gd~V~~~~~-----------------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~t  129 (320)
T cd08243          79 GQRVATAMG-----------------------------GMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYT  129 (320)
T ss_pred             CCEEEEecC-----------------------------CCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHH
Confidence            999974210                             001234589999999999999999999999999999999999


Q ss_pred             hhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCC--HHHHHHHcCC
Q 021300          171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD--QDEMQAAMGT  247 (314)
Q Consensus       171 a~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~--~~~~~~~~~~  247 (314)
                      ||+++.....+++|+++||+|+ |.+|++++++|+..|++++++++++++.+.+ +++|++.+++...  .+.+.+..++
T Consensus       130 a~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~~~~~  208 (320)
T cd08243         130 AWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KELGADEVVIDDGAIAEQLRAAPGG  208 (320)
T ss_pred             HHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEEEecCccHHHHHHHhCCC
Confidence            9999988877899999999997 9999999999999999999999888777555 7899988775432  2334444347


Q ss_pred             ccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       248 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      +|+++|++|+. .+..++++++++|+++.+|...
T Consensus       209 ~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~  241 (320)
T cd08243         209 FDKVLELVGTA-TLKDSLRHLRPGGIVCMTGLLG  241 (320)
T ss_pred             ceEEEECCChH-HHHHHHHHhccCCEEEEEccCC
Confidence            99999999986 5899999999999999999754

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=99.97  E-value=6.7e-29  Score=224.08  Aligned_cols=252  Identities=29%  Similarity=0.343  Sum_probs=209.4

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ||++++...+.+..+++.+.+.|.+.+++|+||+.++++|+.|+....+.++. ..+|.++|||++|+|+++|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (323)
T cd05276           1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK   80 (323)
T ss_pred             CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence            67788877666777888888888889999999999999999999887765532 35678999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||+|+..                                   ...|+|++|+.++.+.++++|+++++++++.++..+.
T Consensus        81 ~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~  125 (323)
T cd05276          81 VGDRVCAL-----------------------------------LAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFF  125 (323)
T ss_pred             CCCEEEEe-----------------------------------cCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHH
Confidence            99999741                                   2358999999999999999999999999999999999


Q ss_pred             hhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHHc
Q 021300          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAM  245 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~  245 (314)
                      ++|+++.....+.++++++|+|+ |.+|++++++++..|++++++++++++...+ +++|++.+++....+.   +....
T Consensus       126 ~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~  204 (323)
T cd05276         126 TAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALGADVAINYRTEDFAEEVKEAT  204 (323)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEeCCchhHHHHHHHHh
Confidence            99999877777899999999997 9999999999999999999988887777555 7789888887766543   22332


Q ss_pred             --CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEe
Q 021300          246 --GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDS  299 (314)
Q Consensus       246 --~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~  299 (314)
                        .++|++++++|+.. ....+++++++|+++.+|..+. ...++...++.++..+.
T Consensus       205 ~~~~~d~vi~~~g~~~-~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~  260 (323)
T cd05276         205 GGRGVDVILDMVGGDY-LARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLT  260 (323)
T ss_pred             CCCCeEEEEECCchHH-HHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEE
Confidence              36999999999875 8889999999999999987643 34555555555666665

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=99.97  E-value=1.9e-29  Score=229.02  Aligned_cols=223  Identities=26%  Similarity=0.367  Sum_probs=178.0

Q ss_pred             CCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCC----CCCCcccccccEE---EEEeC-CCCCCCCCC
Q 021300           20 DTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNT----IYPIVPGHEIVGV---VTEVG-SKVSKFKVG   91 (314)
Q Consensus        20 ~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~----~~p~~~G~e~~G~---V~~vG-~~v~~~~~G   91 (314)
                      +.+......+.++|.|.++|++||+.++++|+.|..++.+.+...    .+|.+++.++.|+   +...| ..+..+..|
T Consensus        15 ~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g   94 (347)
T KOG1198|consen   15 GGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHG   94 (347)
T ss_pred             CCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEee
Confidence            334444557899999999999999999999999999999877643    3665555555554   33334 233345556


Q ss_pred             CEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhh
Q 021300           92 DKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITV  171 (314)
Q Consensus        92 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta  171 (314)
                      |++.                                   .....|+|+||+++|...++++|++++++++|.+|.++.||
T Consensus        95 ~~~~-----------------------------------~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA  139 (347)
T KOG1198|consen   95 DAVV-----------------------------------AFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTA  139 (347)
T ss_pred             eEEe-----------------------------------eccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHH
Confidence            5554                                   34578999999999999999999999999999999999999


Q ss_pred             hhhhHhcC------CCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHH
Q 021300          172 YSPLRFYG------LDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA  244 (314)
Q Consensus       172 ~~~l~~~~------~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~  244 (314)
                      |.++.+..      ..++|++|||+|+ |++|++++|+|++.++..++++.+ ++..++++++|++.++|+++++..++.
T Consensus       140 ~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s-~e~~~l~k~lGAd~vvdy~~~~~~e~~  218 (347)
T KOG1198|consen  140 LSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACS-KEKLELVKKLGADEVVDYKDENVVELI  218 (347)
T ss_pred             HHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcc-cchHHHHHHcCCcEeecCCCHHHHHHH
Confidence            99999888      8899999999986 999999999999999544444444 444588899999999999998876665


Q ss_pred             cC----CccEEEEccCCcccHHHHHHhhccCCEEEEEcC
Q 021300          245 MG----TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       245 ~~----~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      ..    +||+||||+|+.. ......++...|+...++.
T Consensus       219 kk~~~~~~DvVlD~vg~~~-~~~~~~~l~~~g~~~~i~~  256 (347)
T KOG1198|consen  219 KKYTGKGVDVVLDCVGGST-LTKSLSCLLKGGGGAYIGL  256 (347)
T ss_pred             HhhcCCCccEEEECCCCCc-cccchhhhccCCceEEEEe
Confidence            54    7999999999974 7888888888876555543

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.97  E-value=1.1e-28  Score=223.04  Aligned_cols=257  Identities=26%  Similarity=0.343  Sum_probs=209.7

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      |+++++...+.+..+++.+++.|.+.+++|+||+.++++|++|.....+.+. ....|+++|||++|+|+++|+++..|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~   80 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK   80 (325)
T ss_pred             CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence            5677777655566688889999999999999999999999999988777553 245788999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||+|+..+.                          +    .....|++++|+.++.+.++++|+++++++++.++++..
T Consensus        81 ~Gd~v~~~~~--------------------------~----~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~  130 (325)
T cd08253          81 VGDRVWLTNL--------------------------G----WGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPAL  130 (325)
T ss_pred             CCCEEEEecc--------------------------c----cCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHH
Confidence            9999975320                          0    001368899999999999999999999999999999999


Q ss_pred             hhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHHc
Q 021300          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAM  245 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~  245 (314)
                      ++|+++.....+.+|++++|+|+ +.+|++++++++..|++++++++++++.+.+ +++|++.+++....+.   +.+..
T Consensus       131 ~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~  209 (325)
T cd08253         131 TAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQAGADAVFNYRAEDLADRILAAT  209 (325)
T ss_pred             HHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeCCCcCHHHHHHHHc
Confidence            99999987677899999999997 9999999999999999999999888777665 6789988887766543   33332


Q ss_pred             --CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300          246 --GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       246 --~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~  299 (314)
                        +++|+++++++... ....++.++++|+++.+|.......++...++.++..+.
T Consensus       210 ~~~~~d~vi~~~~~~~-~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~  264 (325)
T cd08253         210 AGQGVDVIIEVLANVN-LAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIR  264 (325)
T ss_pred             CCCceEEEEECCchHH-HHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEE
Confidence              36999999999875 788899999999999998754334455555444555444

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.97  E-value=2.7e-28  Score=221.61  Aligned_cols=257  Identities=23%  Similarity=0.303  Sum_probs=203.9

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ||++++...+.+..+++++.|.|.|+++||+|||.++++|+.|...+.+.+.. +.+|.++|||++|+|++  +++++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~   78 (324)
T cd08288           1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK   78 (324)
T ss_pred             CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence            67888877666667889999999999999999999999999999887776532 34578899999999999  7778899


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||+|+....               +              .+....|+|++|+.++.+.++++|+++++++++.+++.+.
T Consensus        79 ~Gd~V~~~~~---------------~--------------~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~  129 (324)
T cd08288          79 PGDRVVLTGW---------------G--------------VGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGF  129 (324)
T ss_pred             CCCEEEECCc---------------c--------------CCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHH
Confidence            9999975210               0              0112468999999999999999999999999999999999


Q ss_pred             hhhhhhH---hcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH-HHHH
Q 021300          170 TVYSPLR---FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE-MQAA  244 (314)
Q Consensus       170 ta~~~l~---~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~-~~~~  244 (314)
                      +++.++.   .....++|++++|+|+ |++|++++|+|+.+|+++++++.++++.+.+ +++|++.++++++.+. +..+
T Consensus       130 ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~  208 (324)
T cd08288         130 TAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYL-RSLGASEIIDRAELSEPGRPL  208 (324)
T ss_pred             HHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HhcCCCEEEEcchhhHhhhhh
Confidence            9887764   3343336789999998 9999999999999999999998888777555 7899999988876433 2333


Q ss_pred             c-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEee
Q 021300          245 M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       245 ~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~~  300 (314)
                      . +++|.++|++++. .+..++..++.+|+++.+|...+ +..++...++.++.++.+
T Consensus       209 ~~~~~~~~~d~~~~~-~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~  265 (324)
T cd08288         209 QKERWAGAVDTVGGH-TLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLG  265 (324)
T ss_pred             ccCcccEEEECCcHH-HHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEE
Confidence            3 3689999999975 37788899999999999997532 233444445466677663

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=2.2e-28  Score=220.86  Aligned_cols=238  Identities=26%  Similarity=0.345  Sum_probs=191.7

Q ss_pred             CCccceeeeeecCCCCCeEEEEEeeeccChhhhhhH-hcCCCC--CCCCCcccccccEEEEEeCCCCCCCCCCCEEEecc
Q 021300           22 SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMI-KNEWGN--TIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC   98 (314)
Q Consensus        22 ~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~-~~~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~   98 (314)
                      ++.+++++++.|++.++||+||+.++++|+.|+..+ .+....  +..|.++|+|++|+|+++|++++.+++||+|+.. 
T Consensus         4 ~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-   82 (312)
T cd08269           4 PGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGL-   82 (312)
T ss_pred             CCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEe-
Confidence            346889999999999999999999999999998877 654321  2347899999999999999999999999999741 


Q ss_pred             cccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhc
Q 021300           99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFY  178 (314)
Q Consensus        99 ~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~  178 (314)
                                                         ..|+|++|+.++.+.++++|+++  ..++.+..++.++++++. .
T Consensus        83 -----------------------------------~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~  124 (312)
T cd08269          83 -----------------------------------SGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-R  124 (312)
T ss_pred             -----------------------------------cCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-h
Confidence                                               35889999999999999999988  222222367788999887 5


Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHHcC--CccEEE
Q 021300          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG--TMDGII  252 (314)
Q Consensus       179 ~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~~~~--~~d~v~  252 (314)
                      ..+++|++++|+|+|.+|.+++++|+..|++ ++++++.+++. ++.+++|++.+++.+..+   .+.+...  ++|+++
T Consensus       125 ~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vl  203 (312)
T cd08269         125 GWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARL-ALARELGATEVVTDDSEAIVERVRELTGGAGADVVI  203 (312)
T ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH-HHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEE
Confidence            6689999999998899999999999999998 88877776665 466889998888765543   3333433  699999


Q ss_pred             EccCCcccHHHHHHhhccCCEEEEEcCCC-CCcccchhhhhcCceeEe
Q 021300          253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       253 d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~i~  299 (314)
                      |++|........+++|+++|+++.+|... .+..++...+..++..+.
T Consensus       204 d~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~  251 (312)
T cd08269         204 EAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLI  251 (312)
T ss_pred             ECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEE
Confidence            99987666889999999999999999754 334555555566666665

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.96  E-value=6.4e-28  Score=219.61  Aligned_cols=247  Identities=22%  Similarity=0.202  Sum_probs=195.0

Q ss_pred             cchhhhccC----CCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC---CCCCCcccccccEEEEEeCCC
Q 021300           12 NAFGWAAKD----TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN---TIYPIVPGHEIVGVVTEVGSK   84 (314)
Q Consensus        12 ~~~~~~~~~----~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~---~~~p~~~G~e~~G~V~~vG~~   84 (314)
                      +++++...+    .+..+++++.+.|++.+++|+|||.++++|+.|...+.+....   ...+.++|+|++|+|+++|++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~   82 (329)
T cd05288           3 RQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP   82 (329)
T ss_pred             cEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC
Confidence            455565544    4577888999999999999999999999999886655443211   123467899999999999964


Q ss_pred             CCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecC-CceEECCCCCC--cccc
Q 021300           85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADE-HFVVRIPEGTP--LDAT  161 (314)
Q Consensus        85 v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~-~~~~~~p~~~~--~~~a  161 (314)
                        ++++||+|+.                                      .++|++|+.++. +.++++|++++  +.++
T Consensus        83 --~~~~Gd~V~~--------------------------------------~~~~~~~~~v~~~~~~~~lP~~~~~~~~~~  122 (329)
T cd05288          83 --DFKVGDLVSG--------------------------------------FLGWQEYAVVDGASGLRKLDPSLGLPLSAY  122 (329)
T ss_pred             --CCCCCCEEec--------------------------------------ccceEEEEEecchhhcEECCcccCCCHHHH
Confidence              7999999962                                      247999999999 99999999985  4455


Q ss_pred             cc-cchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH
Q 021300          162 AP-LLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD  239 (314)
Q Consensus       162 a~-~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~  239 (314)
                      +. +++.+.++|+++.....+.+|+++||+|+ |++|++++++++..|++++++++++++...+.+.+|++.+++.++.+
T Consensus       123 ~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~  202 (329)
T cd05288         123 LGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPD  202 (329)
T ss_pred             HHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChh
Confidence            44 88999999999987777899999999996 99999999999999999999988887776554449999888887654


Q ss_pred             HH---HHHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-c-----ccchhhhhcCceeEe
Q 021300          240 EM---QAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-L-----ELPAFSLLMGEEEDS  299 (314)
Q Consensus       240 ~~---~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~-----~~~~~~~~~~~~~i~  299 (314)
                      ..   .+.. +++|++||++|+. .+..++++++++|+++.+|..... .     .++....+.++.++.
T Consensus       203 ~~~~v~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (329)
T cd05288         203 LAEALKEAAPDGIDVYFDNVGGE-ILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQ  271 (329)
T ss_pred             HHHHHHHhccCCceEEEEcchHH-HHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEE
Confidence            32   2332 4799999999986 589999999999999999875432 1     123445556677665

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=4.5e-28  Score=220.71  Aligned_cols=232  Identities=25%  Similarity=0.369  Sum_probs=195.6

Q ss_pred             cchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           12 NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      |++.+...+.+..+++++.+.|.|.+++|+||+.++++|+.|+..+.+.... ..+|+++|+|++|+|+.+|++++.|++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~   81 (331)
T cd08273           2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV   81 (331)
T ss_pred             eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence            5667777677778999999999999999999999999999999888776542 246889999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  170 (314)
                      ||+|...+                                   ..|++++|+.++.+.++++|+++++++++.+++.+.+
T Consensus        82 Gd~V~~~~-----------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~t  126 (331)
T cd08273          82 GDRVAALT-----------------------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVT  126 (331)
T ss_pred             CCEEEEeC-----------------------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHH
Confidence            99997421                                   2488999999999999999999999999999999999


Q ss_pred             hhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHH-HH-cCC
Q 021300          171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ-AA-MGT  247 (314)
Q Consensus       171 a~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~-~~-~~~  247 (314)
                      +|+++.....+++|++++|+|+ |.+|++++++++..|++++++++ +++. .+++++|++. ++....+... .. .++
T Consensus       127 a~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~-~~~~~~g~~~-~~~~~~~~~~~~~~~~~  203 (331)
T cd08273         127 AYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNH-AALRELGATP-IDYRTKDWLPAMLTPGG  203 (331)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHH-HHHHHcCCeE-EcCCCcchhhhhccCCC
Confidence            9999987777899999999997 99999999999999999988887 5555 5557899764 3443332222 12 247


Q ss_pred             ccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300          248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       248 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      +|++++++++.. +..++++++++|+++.+|....
T Consensus       204 ~d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~  237 (331)
T cd08273         204 VDVVFDGVGGES-YEESYAALAPGGTLVCYGGNSS  237 (331)
T ss_pred             ceEEEECCchHH-HHHHHHHhcCCCEEEEEccCCC
Confidence            999999999886 8899999999999999997653

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.96  E-value=1.4e-27  Score=215.19  Aligned_cols=248  Identities=28%  Similarity=0.336  Sum_probs=200.8

Q ss_pred             hhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCE
Q 021300           14 FGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDK   93 (314)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~   93 (314)
                      +.+...+.+..+++.+.+.|.+.++||+|||.++++|+.|+....+.++. .+|.++|||++|+|+.+|+++.++++||+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G~~   81 (320)
T cd05286           3 VRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVGDR   81 (320)
T ss_pred             EEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCCCE
Confidence            33333344455666677777889999999999999999999887775542 56778999999999999999999999999


Q ss_pred             EEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhh
Q 021300           94 VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYS  173 (314)
Q Consensus        94 V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~  173 (314)
                      |+..                                   ...|++++|+.++.+.++++|++++.++++.+++...++|+
T Consensus        82 V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~  126 (320)
T cd05286          82 VAYA-----------------------------------GPPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHY  126 (320)
T ss_pred             EEEe-----------------------------------cCCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHH
Confidence            9741                                   02588999999999999999999999999989999999999


Q ss_pred             hhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHHcC--C
Q 021300          174 PLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAMG--T  247 (314)
Q Consensus       174 ~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~~--~  247 (314)
                      ++.....+++|++++|+|+ |++|++++++++.+|++++++++++++.+.+ +++|++.+++....+.   +.....  +
T Consensus       127 ~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~  205 (320)
T cd05286         127 LLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAAGADHVINYRDEDFVERVREITGGRG  205 (320)
T ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHCCCCEEEeCCchhHHHHHHHHcCCCC
Confidence            9877777899999999996 9999999999999999999998888777665 7799988887766443   333332  6


Q ss_pred             ccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-cccchhhhhcCceeEe
Q 021300          248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGEEEDS  299 (314)
Q Consensus       248 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~~~~~~~~~~~~~~i~  299 (314)
                      +|++++++++. ....++++++++|+++.+|..... ..++...+..++..+.
T Consensus       206 ~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~  257 (320)
T cd05286         206 VDVVYDGVGKD-TFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLT  257 (320)
T ss_pred             eeEEEECCCcH-hHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEE
Confidence            99999999986 588999999999999999876532 2334433334555543

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=99.96  E-value=5.1e-28  Score=207.76  Aligned_cols=242  Identities=20%  Similarity=0.178  Sum_probs=190.6

Q ss_pred             CCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeC--CCCCCCCCCCEEEecc
Q 021300           21 TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVG--SKVSKFKVGDKVGVGC   98 (314)
Q Consensus        21 ~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG--~~v~~~~~Gd~V~~~~   98 (314)
                      .++++++++.++|+|++||||+|+.+.+++|.....+.. .+.=..|+-+|...+|.++...  |+.+.|++||.|.   
T Consensus        23 ~~d~F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d-~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~---   98 (340)
T COG2130          23 VPDDFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSD-APSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVV---   98 (340)
T ss_pred             CCCCceeEeccCCCCCcCceEEEEEEeccCHHHeecccC-CcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEE---
Confidence            357799999999999999999999999999843322211 1111335556666555444433  5677899999996   


Q ss_pred             cccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccc--cccchhhhhhhhhhH
Q 021300           99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDAT--APLLCAGITVYSPLR  176 (314)
Q Consensus        99 ~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a--a~~~~~~~ta~~~l~  176 (314)
                                                         ...+|++|..++.+.+.+++++.-...+  ..+.++..|||.+|.
T Consensus        99 -----------------------------------~~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl  143 (340)
T COG2130          99 -----------------------------------GVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLL  143 (340)
T ss_pred             -----------------------------------ecccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHH
Confidence                                               3358999999999999999866433222  377889999999999


Q ss_pred             hcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHc----CCccEE
Q 021300          177 FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM----GTMDGI  251 (314)
Q Consensus       177 ~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~----~~~d~v  251 (314)
                      +.++.|+|++|+|-+| |++|..+.|+||..|++|+.++..+++...+.+.+|.|.++|++.++....+.    .++|+.
T Consensus       144 ~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvy  223 (340)
T COG2130         144 DIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVY  223 (340)
T ss_pred             HhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEE
Confidence            9999999999999887 99999999999999999999999999998888789999999999986655544    489999


Q ss_pred             EEccCCcccHHHHHHhhccCCEEEEEcCCCC------Ccccch-hhhhcCceeEe-eec
Q 021300          252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK------PLELPA-FSLLMGEEEDS-WWQ  302 (314)
Q Consensus       252 ~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~------~~~~~~-~~~~~~~~~i~-~~~  302 (314)
                      ||++|+.. +..++..|..++|++++|.-++      +...+. ..++.++++++ |..
T Consensus       224 feNVGg~v-~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv  281 (340)
T COG2130         224 FENVGGEV-LDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIV  281 (340)
T ss_pred             EEcCCchH-HHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEe
Confidence            99999985 9999999999999999997432      112222 23444688887 444

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=1.5e-27  Score=216.03  Aligned_cols=253  Identities=25%  Similarity=0.317  Sum_probs=203.4

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ||++++...+.++.+++++.+.|.+.+++|+||+.++++|+.|.....+.... ...|.++|||++|+|+++|+++..|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (326)
T cd08272           1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR   80 (326)
T ss_pred             CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence            67888877666667888888888899999999999999999999887765431 24578899999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||+|.....                          +.    ....|++++|+.++...++++|+.+++++++.++..+.
T Consensus        81 ~Gd~V~~~~~--------------------------~~----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~  130 (326)
T cd08272          81 VGDEVYGCAG--------------------------GL----GGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGI  130 (326)
T ss_pred             CCCEEEEccC--------------------------Cc----CCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHH
Confidence            9999974210                          00    01368899999999999999999999999999999999


Q ss_pred             hhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH--HHHHHHcC
Q 021300          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ--DEMQAAMG  246 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~--~~~~~~~~  246 (314)
                      +||+++.....+++|++++|+|+ |.+|++++++++..|+++++++++ ++...+ +++|++.+++....  +.+.+...
T Consensus       131 ~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~  208 (326)
T cd08272         131 TAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFA-RSLGADPIIYYRETVVEYVAEHTG  208 (326)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHH-HHcCCCEEEecchhHHHHHHHhcC
Confidence            99999877777899999999986 999999999999999999988877 666444 77999888776654  22333333


Q ss_pred             --CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300          247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       247 --~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~  299 (314)
                        ++|+++|++++.. ....+++++++|+++.+|...   +.+......++..+.
T Consensus       209 ~~~~d~v~~~~~~~~-~~~~~~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~  259 (326)
T cd08272         209 GRGFDVVFDTVGGET-LDASFEAVALYGRVVSILGGA---THDLAPLSFRNATYS  259 (326)
T ss_pred             CCCCcEEEECCChHH-HHHHHHHhccCCEEEEEecCC---ccchhhHhhhcceEE
Confidence              6999999999864 888999999999999998753   222223334555544

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.96  E-value=1.4e-27  Score=219.79  Aligned_cols=236  Identities=22%  Similarity=0.273  Sum_probs=183.5

Q ss_pred             cchhhhccCCCCccceeeeeecC-CCCCeEEEEEeeeccChhhhhhHhcCCCCCC-CCCcccccccEEEEEeCCCCC-CC
Q 021300           12 NAFGWAAKDTSGVLSPFHFSRRA-TGEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVS-KF   88 (314)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~p~-~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~-~p~~~G~e~~G~V~~vG~~v~-~~   88 (314)
                      +++++...+++..++..+.+.|+ +.+++|+||+.++++|+.|+..+.+...... .|.++|+|++|+|+++|++++ .|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~   81 (352)
T cd08247           2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW   81 (352)
T ss_pred             ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence            45666665555444445555553 3999999999999999999887654222112 377899999999999999998 89


Q ss_pred             CCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC----ceEECCCCCCccccccc
Q 021300           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH----FVVRIPEGTPLDATAPL  164 (314)
Q Consensus        89 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~----~~~~~p~~~~~~~aa~~  164 (314)
                      ++||+|+.....                              .....|+|++|+.++..    .++++|+++++++++.+
T Consensus        82 ~~Gd~V~~~~~~------------------------------~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~  131 (352)
T cd08247          82 KVGDEVCGIYPH------------------------------PYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAW  131 (352)
T ss_pred             CCCCEEEEeecC------------------------------CCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHh
Confidence            999999743210                              00136899999999987    78999999999999999


Q ss_pred             chhhhhhhhhhHhcC-CCCCCCEEEEEcC-ChHHHHHHHHHHHC-CC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHH-
Q 021300          165 LCAGITVYSPLRFYG-LDKPGMHVGVVGL-GGLGHVAVKFAKAM-GV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD-  239 (314)
Q Consensus       165 ~~~~~ta~~~l~~~~-~~~~g~~vlI~Ga-g~vG~~a~~~a~~~-g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~-  239 (314)
                      +..+.|||+++.... .+++|++++|+|+ +.+|.+++++|+.. +. .++.+. ++++.. .++++|++.+++.++.+ 
T Consensus       132 ~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~-~~~~~g~~~~i~~~~~~~  209 (352)
T cd08247         132 PLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAE-LNKKLGADHFIDYDAHSG  209 (352)
T ss_pred             HHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHH-HHHHhCCCEEEecCCCcc
Confidence            999999999998776 6899999999998 89999999999987 44 455554 455554 55889998888866543 


Q ss_pred             --H----HHHHc--CCccEEEEccCCcccHHHHHHhhc---cCCEEEEEcC
Q 021300          240 --E----MQAAM--GTMDGIIDTVSAVHPLMPLIGLLK---SQGKLVLVGA  279 (314)
Q Consensus       240 --~----~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~---~~G~~v~~G~  279 (314)
                        .    +....  +++|++||++|+......++++++   ++|+++.++.
T Consensus       210 ~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~  260 (352)
T cd08247         210 VKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVG  260 (352)
T ss_pred             cchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeC
Confidence              2    22333  379999999998555888999999   9999998753

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=2.7e-27  Score=214.58  Aligned_cols=236  Identities=29%  Similarity=0.406  Sum_probs=195.7

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      ||++++..++....+++++.+.|++.+++|+|||.++++|+.|+....+......+|.++|||++|+|+.+|++++.+++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~   80 (325)
T cd08271           1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV   80 (325)
T ss_pred             CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence            67777765442236889999999999999999999999999999887765543334778999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  170 (314)
                      ||+|+..+.                                ....|++++|+.++.+.++++|+++++.+++.+++.+.+
T Consensus        81 Gd~V~~~~~--------------------------------~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~  128 (325)
T cd08271          81 GDRVAYHAS--------------------------------LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLT  128 (325)
T ss_pred             CCEEEeccC--------------------------------CCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHH
Confidence            999975321                                124688999999999999999999999999999999999


Q ss_pred             hhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHHcC
Q 021300          171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAMG  246 (314)
Q Consensus       171 a~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~~  246 (314)
                      +|+++.....+++|++++|+|+ |.+|++++++++..|++++++. .+++. +.++++|++.+++....+.   +.+...
T Consensus       129 a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~  206 (325)
T cd08271         129 AYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNF-EYVKSLGADHVIDYNDEDVCERIKEITG  206 (325)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHH-HHHHHcCCcEEecCCCccHHHHHHHHcC
Confidence            9999988777899999999998 8999999999999999988776 55555 4447789988887766433   333332


Q ss_pred             --CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       247 --~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                        ++|++++++++.. ...++++++++|+++.+|...
T Consensus       207 ~~~~d~vi~~~~~~~-~~~~~~~l~~~G~~v~~~~~~  242 (325)
T cd08271         207 GRGVDAVLDTVGGET-AAALAPTLAFNGHLVCIQGRP  242 (325)
T ss_pred             CCCCcEEEECCCcHh-HHHHHHhhccCCEEEEEcCCC
Confidence              6999999999875 677899999999999997543

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=3.6e-27  Score=213.54  Aligned_cols=257  Identities=26%  Similarity=0.350  Sum_probs=206.8

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ||++.+...+.+..+++.+.+.|.+.+++++|+|.++++|+.|.....+.+.. ..+|.++|||++|+|+.+|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA   80 (328)
T ss_pred             CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence            56666665455566777788888889999999999999999998877665442 24578899999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||+|...+..                              +....|++++|+.++.+.++++|+++++++++.+++.+.
T Consensus        81 ~Gd~V~~~~~~------------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  130 (328)
T cd08268          81 VGDRVSVIPAA------------------------------DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYL  130 (328)
T ss_pred             CCCEEEecccc------------------------------ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHH
Confidence            99999753210                              112458899999999999999999999999999999999


Q ss_pred             hhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHHc
Q 021300          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM  245 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~~~  245 (314)
                      ++|.++.....++++++++|+|+ |.+|++++++++..|+++++++++.++...+ +++|++.+++.+..+   .+.+..
T Consensus       131 ~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~  209 (328)
T cd08268         131 TAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LALGAAHVIVTDEEDLVAEVLRIT  209 (328)
T ss_pred             HHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEecCCccHHHHHHHHh
Confidence            99999987777899999999997 9999999999999999999999888777666 678988887776543   233333


Q ss_pred             C--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEe
Q 021300          246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDS  299 (314)
Q Consensus       246 ~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~  299 (314)
                      .  ++|++++++++. ....++++++++|+++.+|.... +..++....+.++..+.
T Consensus       210 ~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~  265 (328)
T cd08268         210 GGKGVDVVFDPVGGP-QFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFR  265 (328)
T ss_pred             CCCCceEEEECCchH-hHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEE
Confidence            3  699999999986 48889999999999999987542 23444443455666654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.96  E-value=5.1e-27  Score=212.31  Aligned_cols=252  Identities=29%  Similarity=0.340  Sum_probs=204.9

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      |+++.+...+.+..+++.+.+.|.+++++++|||.++++|+.|.....+.+.. ..+|.++|||++|+|+.+|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK   80 (325)
T ss_pred             CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence            56666655455556667777777789999999999999999998887665432 24578999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||+|+..                                   ...|++++|+.++...++++|+++++.+++.++....
T Consensus        81 ~Gd~V~~~-----------------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~  125 (325)
T TIGR02824        81 VGDRVCAL-----------------------------------VAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFF  125 (325)
T ss_pred             CCCEEEEc-----------------------------------cCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHH
Confidence            99999741                                   1348899999999999999999999999989999999


Q ss_pred             hhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHHc
Q 021300          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAM  245 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~  245 (314)
                      ++|+++.....+++|++++|+|+ |++|.+++++++..|++++++.+++++.+.+ +++|++.+++....+.   +....
T Consensus       126 ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~  204 (325)
T TIGR02824       126 TVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EALGADIAINYREEDFVEVVKAET  204 (325)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEecCchhHHHHHHHHc
Confidence            99999877777899999999997 9999999999999999999998888777544 7899888877765443   33333


Q ss_pred             C--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEe
Q 021300          246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDS  299 (314)
Q Consensus       246 ~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~  299 (314)
                      .  ++|++++++|+. .+..++++++++|+++.+|.... ...++...++.++.++.
T Consensus       205 ~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~  260 (325)
T TIGR02824       205 GGKGVDVILDIVGGS-YLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTIT  260 (325)
T ss_pred             CCCCeEEEEECCchH-HHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEE
Confidence            2  699999999976 48889999999999999987542 23555555556677765

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.95  E-value=4.6e-27  Score=211.14  Aligned_cols=237  Identities=30%  Similarity=0.424  Sum_probs=196.6

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG---NTIYPIVPGHEIVGVVTEVGSKVSK   87 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~   87 (314)
                      |+++.+...+....+++++.+.|.++++||+|||.++++|+.|+..+.+...   ...+|.++|||++|+|+.+|+++..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~   80 (309)
T cd05289           1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG   80 (309)
T ss_pred             CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence            5677776655555566777888889999999999999999999988877542   2345889999999999999999999


Q ss_pred             CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (314)
Q Consensus        88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~  167 (314)
                      +++||+|+..+..                                ...|++++|+.++...++++|+++++..++.+++.
T Consensus        81 ~~~G~~V~~~~~~--------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  128 (309)
T cd05289          81 FKVGDEVFGMTPF--------------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLA  128 (309)
T ss_pred             CCCCCEEEEccCC--------------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHH
Confidence            9999999743210                                13588999999999999999999999999989999


Q ss_pred             hhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHc-
Q 021300          168 GITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM-  245 (314)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~-  245 (314)
                      +.++|+++.....+.+|++++|+|+ |.+|++++++++..|++++++++++ +. +.++++|.+.+++....+...... 
T Consensus       129 ~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~-~~~~~~g~~~~~~~~~~~~~~~~~~  206 (309)
T cd05289         129 GLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NA-DFLRSLGADEVIDYTKGDFERAAAP  206 (309)
T ss_pred             HHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hH-HHHHHcCCCEEEeCCCCchhhccCC
Confidence            9999999988777899999999997 9999999999999999999888776 54 445789988888766544332122 


Q ss_pred             CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300          246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       246 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      +++|++++++++. ....++++++++|+++.+|....
T Consensus       207 ~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~  242 (309)
T cd05289         207 GGVDAVLDTVGGE-TLARSLALVKPGGRLVSIAGPPP  242 (309)
T ss_pred             CCceEEEECCchH-HHHHHHHHHhcCcEEEEEcCCCc
Confidence            3699999999988 48999999999999999987543

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08251 polyketide_synthase polyketide synthase

Probab=99.95  E-value=2e-26  Score=206.54  Aligned_cols=214  Identities=25%  Similarity=0.383  Sum_probs=183.3

Q ss_pred             ecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCcccc
Q 021300           32 RRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCA  110 (314)
Q Consensus        32 ~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~  110 (314)
                      +|++.+++|+||+.++++|+.|+..+.+.++. ..+|.++|+|++|+|+++|++++++++||+|+..+            
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~------------   69 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGT------------   69 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEec------------
Confidence            57889999999999999999999988776542 35688999999999999999999999999997422            


Q ss_pred             CCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEE
Q 021300          111 IDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV  190 (314)
Q Consensus       111 ~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~  190 (314)
                                           ....|+|++|+.++.+.++++|+++++++++.++..+.++|++++ ...+++|++++|+
T Consensus        70 ---------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~  127 (303)
T cd08251          70 ---------------------GESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGLAKGEHILIQ  127 (303)
T ss_pred             ---------------------CCCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCCCCCCEEEEe
Confidence                                 023589999999999999999999999999999999999999986 5568999999998


Q ss_pred             cC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHHcC--CccEEEEccCCcccHHHH
Q 021300          191 GL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAMG--TMDGIIDTVSAVHPLMPL  264 (314)
Q Consensus       191 Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~~--~~d~v~d~~g~~~~~~~~  264 (314)
                      |+ |.+|++++++++..|++++++++.+++...+ +++|++.+++....+.   +.+...  ++|+++|+++.. .....
T Consensus       128 ~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~-~~~~~  205 (303)
T cd08251         128 TATGGTGLMAVQLARLKGAEIYATASSDDKLEYL-KQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGE-AIQKG  205 (303)
T ss_pred             cCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHH-HHHHH
Confidence            76 9999999999999999999998888777666 7899998888766433   333333  699999999865 48889


Q ss_pred             HHhhccCCEEEEEcCCC
Q 021300          265 IGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       265 ~~~l~~~G~~v~~G~~~  281 (314)
                      +++++++|+++.+|..+
T Consensus       206 ~~~l~~~g~~v~~~~~~  222 (303)
T cd08251         206 LNCLAPGGRYVEIAMTA  222 (303)
T ss_pred             HHHhccCcEEEEEeccC
Confidence            99999999999998754

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=3e-26  Score=207.23  Aligned_cols=232  Identities=30%  Similarity=0.398  Sum_probs=186.8

Q ss_pred             hhccCCCCcc--ceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC---CCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           16 WAAKDTSGVL--SPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN---TIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        16 ~~~~~~~~~~--~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      |+.++++.++  ++.+.+.|++.++||+||++++++|+.|...+.+.++.   ...|.++|||++|+|+++|+++..+++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~   82 (319)
T cd08267           3 YTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKV   82 (319)
T ss_pred             eCCCCChhhhhhccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCC
Confidence            3444554444  77788999999999999999999999999887775521   235678999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  170 (314)
                      ||+|+....                                ....|++++|+.++.+.++++|++++.++++.+++.+.+
T Consensus        83 Gd~V~~~~~--------------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~  130 (319)
T cd08267          83 GDEVFGRLP--------------------------------PKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLT  130 (319)
T ss_pred             CCEEEEecc--------------------------------CCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHH
Confidence            999974221                                013588999999999999999999999999999999999


Q ss_pred             hhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHc--CC
Q 021300          171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM--GT  247 (314)
Q Consensus       171 a~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~--~~  247 (314)
                      ||+++.....+++|++++|+|+ |++|++++++++..|++++++++. ++. +.++++|++.+++.+..+......  ++
T Consensus       131 a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~  208 (319)
T cd08267         131 ALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNA-ELVRSLGADEVIDYTTEDFVALTAGGEK  208 (319)
T ss_pred             HHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHH-HHHHHcCCCEeecCCCCCcchhccCCCC
Confidence            9999988877899999999997 999999999999999999888864 555 455889998888766544322222  36


Q ss_pred             ccEEEEccCCc-ccHHHHHHhhccCCEEEEEcCCC
Q 021300          248 MDGIIDTVSAV-HPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       248 ~d~v~d~~g~~-~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      +|++++++|+. ......+..++++|+++.+|...
T Consensus       209 ~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~  243 (319)
T cd08267         209 YDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGP  243 (319)
T ss_pred             CcEEEECCCchHHHHHHhhhccCCCCEEEEecccc
Confidence            99999999843 22333444499999999999764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.95  E-value=7.2e-26  Score=204.46  Aligned_cols=251  Identities=30%  Similarity=0.420  Sum_probs=201.0

Q ss_pred             ccchhhhccCCCCccceeeeeecCCC-CCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATG-EKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKF   88 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~-~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~   88 (314)
                      |+++++...+.+..+++.+.+ |.+. +++++||+.++++|+.|+..+.+.+.. ...|.++|+|++|+|+.+|+++..+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~   79 (323)
T cd08241           1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF   79 (323)
T ss_pred             CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence            566666554455567777777 7666 499999999999999999887775532 2456789999999999999999999


Q ss_pred             CCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhh
Q 021300           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG  168 (314)
Q Consensus        89 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~  168 (314)
                      ++||+|+..+                                   ..|++++|+.++.+.++++|++++..+++.++...
T Consensus        80 ~~G~~V~~~~-----------------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~  124 (323)
T cd08241          80 KVGDRVVALT-----------------------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTY  124 (323)
T ss_pred             CCCCEEEEec-----------------------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHH
Confidence            9999997421                                   25889999999999999999999998888889999


Q ss_pred             hhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHH
Q 021300          169 ITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAA  244 (314)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~  244 (314)
                      .+||.++.....+++|++++|+|+ |.+|++++++++..|++++++++++++...+ +++|++.+++....+.   +...
T Consensus       125 ~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~  203 (323)
T cd08241         125 GTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA-RALGADHVIDYRDPDLRERVKAL  203 (323)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH-HHcCCceeeecCCccHHHHHHHH
Confidence            999999876667899999999998 9999999999999999999998888777555 6789888887765433   3333


Q ss_pred             cC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcc-cchhhhhcCceeEe
Q 021300          245 MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLE-LPAFSLLMGEEEDS  299 (314)
Q Consensus       245 ~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~-~~~~~~~~~~~~i~  299 (314)
                      ..  ++|.+++++|.. ....++++++++|+++.+|....... ++....+.++.++.
T Consensus       204 ~~~~~~d~v~~~~g~~-~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~  260 (323)
T cd08241         204 TGGRGVDVVYDPVGGD-VFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVV  260 (323)
T ss_pred             cCCCCcEEEEECccHH-HHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEE
Confidence            33  699999999985 48889999999999999997544332 33434455666655

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=6.9e-26  Score=206.37  Aligned_cols=229  Identities=29%  Similarity=0.420  Sum_probs=184.6

Q ss_pred             hhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCCCCCE
Q 021300           15 GWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFKVGDK   93 (314)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~   93 (314)
                      .+...+.+..+++.+.+.|.+++++|+||+.++++|+.|...+.+.+.. +..|.++|||++|+|+.+|+++.++++||+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~   83 (337)
T cd08275           4 VLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDR   83 (337)
T ss_pred             EEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCCCCE
Confidence            3333344455777777888889999999999999999999888775532 345778999999999999999999999999


Q ss_pred             EEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhh
Q 021300           94 VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYS  173 (314)
Q Consensus        94 V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~  173 (314)
                      |+..                                   ...|+|++|+.++.+.++++|+.+++++++.+++.+.++|+
T Consensus        84 V~~~-----------------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~  128 (337)
T cd08275          84 VMGL-----------------------------------TRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYY  128 (337)
T ss_pred             EEEe-----------------------------------cCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHH
Confidence            9742                                   13488999999999999999999999999999999999999


Q ss_pred             hhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC-hhhHHHHHHHcCCcEEecCCCHH---HHHHHc-CC
Q 021300          174 PLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIERLGADSFLVSRDQD---EMQAAM-GT  247 (314)
Q Consensus       174 ~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~-~~~~~~~~~~~ga~~~v~~~~~~---~~~~~~-~~  247 (314)
                      ++.....+++|++|+|+|+ |.+|++++++++.. ..+.++... +++. ..++++|++.+++.+..+   .+.+.. ++
T Consensus       129 ~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~-~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  206 (337)
T cd08275         129 ALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTV-PNVTVVGTASASKH-EALKENGVTHVIDYRTQDYVEEVKKISPEG  206 (337)
T ss_pred             HHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHc-cCcEEEEeCCHHHH-HHHHHcCCcEEeeCCCCcHHHHHHHHhCCC
Confidence            9877777899999999998 99999999999998 222223332 3344 444778998888776543   233333 36


Q ss_pred             ccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       248 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      +|+++|++|+.. ...++++++++|+++.+|...
T Consensus       207 ~d~v~~~~g~~~-~~~~~~~l~~~g~~v~~g~~~  239 (337)
T cd08275         207 VDIVLDALGGED-TRKSYDLLKPMGRLVVYGAAN  239 (337)
T ss_pred             ceEEEECCcHHH-HHHHHHhhccCcEEEEEeecC
Confidence            999999999874 888999999999999998754

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.94  E-value=4.6e-25  Score=195.95  Aligned_cols=204  Identities=27%  Similarity=0.358  Sum_probs=176.0

Q ss_pred             CeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCC
Q 021300           38 KDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYC  117 (314)
Q Consensus        38 ~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c  117 (314)
                      +||+||+.++++|+.|++...+..  ..+|.++|+|++|+|+++|++++.+++||+|...                    
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~--------------------   58 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGL--------------------   58 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEE--------------------
Confidence            589999999999999999887754  3567899999999999999999999999999741                    


Q ss_pred             CccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHH
Q 021300          118 PKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLG  196 (314)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG  196 (314)
                                      ..|+|++|+.++.+.++++|+.+++.+++.+++...++|.++.....+++|++++|+|+ |.+|
T Consensus        59 ----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g  122 (293)
T cd05195          59 ----------------APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVG  122 (293)
T ss_pred             ----------------ecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHH
Confidence                            25889999999999999999999999999999999999999877677899999999985 9999


Q ss_pred             HHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC--CcEEecCCCHHH---HHHHc--CCccEEEEccCCcccHHHHHHhhc
Q 021300          197 HVAVKFAKAMGVKVTVISTSPSKKSEAIERLG--ADSFLVSRDQDE---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLK  269 (314)
Q Consensus       197 ~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g--a~~~v~~~~~~~---~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~  269 (314)
                      ++++++++.+|++++++++++++...+ ++++  ++.+++....+.   +.+..  .++|+++|++|+. .+..++++++
T Consensus       123 ~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~  200 (293)
T cd05195         123 QAAIQLAQHLGAEVFATVGSEEKREFL-RELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGE-LLRASWRCLA  200 (293)
T ss_pred             HHHHHHHHHcCCEEEEEeCCHHHHHHH-HHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCch-HHHHHHHhcc
Confidence            999999999999999998888777555 4566  677787766543   33333  2699999999987 5999999999


Q ss_pred             cCCEEEEEcCCC
Q 021300          270 SQGKLVLVGAPE  281 (314)
Q Consensus       270 ~~G~~v~~G~~~  281 (314)
                      ++|+++.+|...
T Consensus       201 ~~g~~v~~g~~~  212 (293)
T cd05195         201 PFGRFVEIGKRD  212 (293)
T ss_pred             cCceEEEeeccc
Confidence            999999998754

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>smart00829 PKS_ER Enoylreductase

Probab=99.93  E-value=4.1e-24  Score=189.72  Aligned_cols=199  Identities=28%  Similarity=0.408  Sum_probs=171.1

Q ss_pred             EEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccc
Q 021300           42 FKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVI  121 (314)
Q Consensus        42 Vkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~  121 (314)
                      ||+.++++|+.|+..+.+.++   .|.++|+|++|+|+++|+.++.+++||+|...                        
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~------------------------   54 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL------------------------   54 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE------------------------
Confidence            899999999999998877543   36789999999999999999999999999741                        


Q ss_pred             cccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHH
Q 021300          122 MTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAV  200 (314)
Q Consensus       122 ~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~  200 (314)
                                  ..|+|++|+.++.+.++++|+++++++++.+++.+.++|.++.....+++|++++|+|+ |.+|++++
T Consensus        55 ------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~  122 (288)
T smart00829       55 ------------APGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAI  122 (288)
T ss_pred             ------------cCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHH
Confidence                        24889999999999999999999999999999999999999866667899999999986 99999999


Q ss_pred             HHHHHCCCeEEEEeCChhhHHHHHHHcCC--cEEecCCCHHH---HHHHcC--CccEEEEccCCcccHHHHHHhhccCCE
Q 021300          201 KFAKAMGVKVTVISTSPSKKSEAIERLGA--DSFLVSRDQDE---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGK  273 (314)
Q Consensus       201 ~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~~~v~~~~~~~---~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~  273 (314)
                      ++++..|++++++++++++...+ +++|+  +.++++.+.+.   +.+...  ++|+++|++++. .+..+++.++++|+
T Consensus       123 ~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~  200 (288)
T smart00829      123 QLAQHLGAEVFATAGSPEKRDFL-RELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGE-FLDASLRCLAPGGR  200 (288)
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHH-HHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHH-HHHHHHHhccCCcE
Confidence            99999999999999888877555 78998  77777766543   333322  699999999865 58889999999999


Q ss_pred             EEEEcCCC
Q 021300          274 LVLVGAPE  281 (314)
Q Consensus       274 ~v~~G~~~  281 (314)
                      ++.+|...
T Consensus       201 ~v~~g~~~  208 (288)
T smart00829      201 FVEIGKRD  208 (288)
T ss_pred             EEEEcCcC
Confidence            99999754

Enoylreductase in Polyketide synthases.

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.90  E-value=7.9e-24  Score=162.00  Aligned_cols=108  Identities=36%  Similarity=0.629  Sum_probs=93.4

Q ss_pred             CCeEEEEEeeeccChhhhhhHhc-CCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCC
Q 021300           37 EKDVTFKVTHCGICHSDLHMIKN-EWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLEN  115 (314)
Q Consensus        37 ~~eVlVkv~a~~l~~~d~~~~~~-~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~  115 (314)
                      |+||||||+++|||++|++++.+ .....+.|.++|||++|+|+++|+++++|++||+|++.+.. .|+.|.+|..+.++
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~c~~~~~~   79 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNI-GCGECEYCLSGRPN   79 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEE-ETSSSHHHHTTTGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeeccc-CccCchhhcCCccc
Confidence            79999999999999999999998 34556899999999999999999999999999999886666 59999999999999


Q ss_pred             CCCccccccccccCCCCccCcccceEEeecCCceEEC
Q 021300          116 YCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI  152 (314)
Q Consensus       116 ~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~  152 (314)
                      +|++....       +....|+|+||+.+++++++++
T Consensus        80 ~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   80 LCPNPEVL-------GLGLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             GTTTBEET-------TTSSTCSSBSEEEEEGGGEEEE
T ss_pred             cCCCCCEe-------EcCCCCcccCeEEEehHHEEEC
Confidence            99876543       3447899999999999999875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.90  E-value=3.3e-22  Score=177.85  Aligned_cols=175  Identities=32%  Similarity=0.478  Sum_probs=147.8

Q ss_pred             CCCCcccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEee
Q 021300           65 IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVA  144 (314)
Q Consensus        65 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v  144 (314)
                      .+|.++|+|++|+|+++|+++++|++||+|+.                                      .+.|++|+.+
T Consensus        19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~--------------------------------------~~~~~~~~~v   60 (277)
T cd08255          19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFC--------------------------------------FGPHAERVVV   60 (277)
T ss_pred             cCCcccCcceeEEEEEeCCCCCCCCCCCEEEe--------------------------------------cCCcceEEEc
Confidence            58899999999999999999999999999973                                      1358999999


Q ss_pred             cCCceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHH
Q 021300          145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEA  223 (314)
Q Consensus       145 ~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~  223 (314)
                      +.+.++++|+++++++++.+ +.+.+||+++. ...+++|++++|+|+|.+|++++++|+.+|++ ++++++++++.. +
T Consensus        61 ~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~-~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~-~  137 (277)
T cd08255          61 PANLLVPLPDGLPPERAALT-ALAATALNGVR-DAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRE-L  137 (277)
T ss_pred             CHHHeeECcCCCCHHHhHHH-HHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHH-H
Confidence            99999999999999998877 78899999986 45689999999998899999999999999998 888888877765 7


Q ss_pred             HHHcC-CcEEecCCCHHHHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC
Q 021300          224 IERLG-ADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP  283 (314)
Q Consensus       224 ~~~~g-a~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~  283 (314)
                      ++++| ++.++.... ..  ....++|++||+++....+...+++++++|+++.+|..+..
T Consensus       138 ~~~~g~~~~~~~~~~-~~--~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~  195 (277)
T cd08255         138 AEALGPADPVAADTA-DE--IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLK  195 (277)
T ss_pred             HHHcCCCccccccch-hh--hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC
Confidence            78888 565554332 11  11237999999988766688999999999999999986543

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.87  E-value=6.1e-22  Score=193.11  Aligned_cols=243  Identities=19%  Similarity=0.215  Sum_probs=199.1

Q ss_pred             CCCCccceeeeeec---CCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCC-------CcccccccEEEEEeCCCCCCCC
Q 021300           20 DTSGVLSPFHFSRR---ATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP-------IVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        20 ~~~~~~~~~~~~~p---~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p-------~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ++-..+++.+-+..   +..++.=+-.|-|+.||.+|+.+..|+.+....|       +.+|.|++|+-          +
T Consensus      1424 GDlsSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd----------~ 1493 (2376)
T KOG1202|consen 1424 GDLSSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRD----------A 1493 (2376)
T ss_pred             ccccceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeecccc----------C
Confidence            44455555555544   4467777999999999999999999988755444       78999999984          4


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      -|.||+                                   +....-++++.+.++.++++.+|+...+++|++.|+.+.
T Consensus      1494 ~GrRvM-----------------------------------~mvpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYs 1538 (2376)
T KOG1202|consen 1494 SGRRVM-----------------------------------GMVPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYS 1538 (2376)
T ss_pred             CCcEEE-----------------------------------EeeehhhhhhhhhcchhhhhhCCcccchhhcccCceEee
Confidence            599997                                   344567899999999999999999999999999999999


Q ss_pred             hhhhhhHhcCCCCCCCEEEEEc-CChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC---CcEEecCCCH---HHHH
Q 021300          170 TVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---ADSFLVSRDQ---DEMQ  242 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~G-ag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g---a~~~v~~~~~---~~~~  242 (314)
                      |+||||...++.|+|+++||++ +|++|++||.+|.++|++|+-++.+.++++.+.+.|+   ...+-|+++.   ..+.
T Consensus      1539 TaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl 1618 (2376)
T KOG1202|consen 1539 TAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVL 1618 (2376)
T ss_pred             eehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHH
Confidence            9999999999999999999985 5999999999999999999999999999999999887   4667777774   3444


Q ss_pred             HHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccch-hhhhcCceeEeeeccccccC
Q 021300          243 AAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA-FSLLMGEEEDSWWQHDWGDE  308 (314)
Q Consensus       243 ~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~  308 (314)
                      +.+.  ++|+|++....+- ++..++||+..||+..+|...-+.+-|+ +.+++++..+.+...+-..+
T Consensus      1619 ~~T~GrGVdlVLNSLaeEk-LQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvme 1686 (2376)
T KOG1202|consen 1619 WHTKGRGVDLVLNSLAEEK-LQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVME 1686 (2376)
T ss_pred             HHhcCCCeeeehhhhhHHH-HHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhc
Confidence            4444  7999999999886 9999999999999999998764444444 55666777777555444433

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.85  E-value=1.2e-19  Score=155.93  Aligned_cols=234  Identities=20%  Similarity=0.171  Sum_probs=177.2

Q ss_pred             cCCCCCeEEEEEeeeccChhhhhhHhcCCCCC--CCCCcccc----cccEEEEEeCCCCCCCCCCCEEEecccccCCCCC
Q 021300           33 RATGEKDVTFKVTHCGICHSDLHMIKNEWGNT--IYPIVPGH----EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSC  106 (314)
Q Consensus        33 p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~--~~p~~~G~----e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c  106 (314)
                      .++..++||||..+.+.+|...-.+.. ....  -.|+.+|.    .++|.|++  ++.+++++||.|...         
T Consensus        33 ~~~~s~~vlvknlYLS~DPymR~rM~~-~~~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~---------  100 (343)
T KOG1196|consen   33 VPLGSGEVLVKNLYLSCDPYMRIRMGK-PDPSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGI---------  100 (343)
T ss_pred             CCCCCccEEeEeeeecCCHHHHhhccC-CCcccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEe---------
Confidence            456889999999999998876543322 1111  11333322    67899999  577889999999621         


Q ss_pred             ccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC--ceEECCC--CCCcccc-cccchhhhhhhhhhHhcCCC
Q 021300          107 DSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPE--GTPLDAT-APLLCAGITVYSPLRFYGLD  181 (314)
Q Consensus       107 ~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~~p~--~~~~~~a-a~~~~~~~ta~~~l~~~~~~  181 (314)
                                                   =+|.||.++++.  ..++++.  ..+.... ..+.++..|||..+.+...+
T Consensus       101 -----------------------------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~p  151 (343)
T KOG1196|consen  101 -----------------------------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSP  151 (343)
T ss_pred             -----------------------------ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCC
Confidence                                         279999988764  3444443  3333333 26788899999999988889


Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH-HHHHHH----cCCccEEEEcc
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-DEMQAA----MGTMDGIIDTV  255 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~-~~~~~~----~~~~d~v~d~~  255 (314)
                      +.|++++|-|| |.+|+++.|+|+..|++|+..+.+.++..-+..+||.|..+|+.++ +....+    .+++|+.||++
T Consensus       152 k~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNV  231 (343)
T KOG1196|consen  152 KKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENV  231 (343)
T ss_pred             CCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEecc
Confidence            99999999887 9999999999999999999999999999888889999999999887 333333    24899999999


Q ss_pred             CCcccHHHHHHhhccCCEEEEEcCCCC---Ccc---cchhhhhcCceeEe-eeccccccC
Q 021300          256 SAVHPLMPLIGLLKSQGKLVLVGAPEK---PLE---LPAFSLLMGEEEDS-WWQHDWGDE  308 (314)
Q Consensus       256 g~~~~~~~~~~~l~~~G~~v~~G~~~~---~~~---~~~~~~~~~~~~i~-~~~~~~~~~  308 (314)
                      |+.. +...+..|+..||++.+|+-+.   +.+   -+...++.|+++++ |...++..+
T Consensus       232 GG~~-lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~  290 (343)
T KOG1196|consen  232 GGKM-LDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDK  290 (343)
T ss_pred             CcHH-HHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhh
Confidence            9985 8999999999999999998542   222   22356777999998 555555544

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.54  E-value=5.5e-14  Score=110.63  Aligned_cols=108  Identities=32%  Similarity=0.469  Sum_probs=94.9

Q ss_pred             hHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHHcC--CccEEEEccCCcccHHHHHHhh
Q 021300          194 GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLL  268 (314)
Q Consensus       194 ~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l  268 (314)
                      ++|++++|+|+..|++|++++++++++ ++++++|++.++++++.+   .++++++  ++|++|||+|+...+..+++++
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~-~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l   79 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKL-ELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL   79 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHH-HHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHH-HHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence            589999999999999999999988776 666899999999998864   4555555  5999999999877899999999


Q ss_pred             ccCCEEEEEcCCC-CCcccchhhhhcCceeEeeec
Q 021300          269 KSQGKLVLVGAPE-KPLELPAFSLLMGEEEDSWWQ  302 (314)
Q Consensus       269 ~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~i~~~~  302 (314)
                      +++|+++.+|.++ .+..++...++.+++++.++.
T Consensus        80 ~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~  114 (130)
T PF00107_consen   80 RPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSW  114 (130)
T ss_dssp             EEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEES
T ss_pred             ccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEc
Confidence            9999999999988 778999999999999998433

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.20  E-value=3.8e-10  Score=107.30  Aligned_cols=119  Identities=23%  Similarity=0.245  Sum_probs=90.3

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCH-------------HHH---HH
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQ-------------DEM---QA  243 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~-------------~~~---~~  243 (314)
                      ..++++|+|+|+|++|+++++.|+.+|++|++++.+++++ +.++++|++.+ ++..+.             +..   .+
T Consensus       162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rl-e~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        162 KVPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVA-EQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            3689999999999999999999999999999999988777 55578999854 444221             111   11


Q ss_pred             H-c---CCccEEEEccCCcc-----c-HHHHHHhhccCCEEEEEcCC-CCC--cccchhhhhc-CceeEee
Q 021300          244 A-M---GTMDGIIDTVSAVH-----P-LMPLIGLLKSQGKLVLVGAP-EKP--LELPAFSLLM-GEEEDSW  300 (314)
Q Consensus       244 ~-~---~~~d~v~d~~g~~~-----~-~~~~~~~l~~~G~~v~~G~~-~~~--~~~~~~~~~~-~~~~i~~  300 (314)
                      . .   +++|++|+|++.+.     . .+.+++.++++|+++++|.. ++.  .+++...++. +++++.+
T Consensus       241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~G  311 (509)
T PRK09424        241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIG  311 (509)
T ss_pred             HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEE
Confidence            1 2   47999999999632     4 49999999999999999985 453  4555556665 7877764

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.09  E-value=2.1e-09  Score=99.76  Aligned_cols=120  Identities=16%  Similarity=0.122  Sum_probs=94.8

Q ss_pred             hhhh-HhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccE
Q 021300          172 YSPL-RFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG  250 (314)
Q Consensus       172 ~~~l-~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~  250 (314)
                      +.++ +......+|++|+|+|.|++|+.+++.++.+|++|++++.++.+.. .++.+|++.+ +.      .+...++|+
T Consensus       189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~-~A~~~G~~~~-~~------~e~v~~aDV  260 (413)
T cd00401         189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICAL-QAAMEGYEVM-TM------EEAVKEGDI  260 (413)
T ss_pred             HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHH-HHHhcCCEEc-cH------HHHHcCCCE
Confidence            3444 3344457999999999999999999999999999999888877764 4467898543 11      133357999


Q ss_pred             EEEccCCcccHHHH-HHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300          251 IIDTVSAVHPLMPL-IGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       251 v~d~~g~~~~~~~~-~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~  301 (314)
                      ||+++|+...+... ++.++++|+++.+|..  +.+++...+..+.+++...
T Consensus       261 VI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~  310 (413)
T cd00401         261 FVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNI  310 (413)
T ss_pred             EEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEc
Confidence            99999988877775 9999999999999975  5678888888888887643

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.66  E-value=5.2e-07  Score=84.20  Aligned_cols=113  Identities=17%  Similarity=0.206  Sum_probs=84.9

Q ss_pred             hhhhhhhHhcCCC-CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCC
Q 021300          169 ITVYSPLRFYGLD-KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT  247 (314)
Q Consensus       169 ~ta~~~l~~~~~~-~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~  247 (314)
                      ..+|.++.+...+ ..|++++|+|.|.+|..+++.++.+|++|+++++++.+..++. ..|++. .+      +.+...+
T Consensus       196 ~s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-~~G~~v-~~------l~eal~~  267 (425)
T PRK05476        196 ESLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQAA-MDGFRV-MT------MEEAAEL  267 (425)
T ss_pred             hhhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-hcCCEe-cC------HHHHHhC
Confidence            3346666555333 4899999999999999999999999999999988877664443 446542 21      2234458


Q ss_pred             ccEEEEccCCcccHH-HHHHhhccCCEEEEEcCCCCCcccchh
Q 021300          248 MDGIIDTVSAVHPLM-PLIGLLKSQGKLVLVGAPEKPLELPAF  289 (314)
Q Consensus       248 ~d~v~d~~g~~~~~~-~~~~~l~~~G~~v~~G~~~~~~~~~~~  289 (314)
                      +|++|+++|+...+. ..+..|++++.++.+|......+++.+
T Consensus       268 aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~Eid~~~L  310 (425)
T PRK05476        268 GDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDNEIDVAAL  310 (425)
T ss_pred             CCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCCccChHHH
Confidence            999999999877565 688999999999999997655555543

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.63  E-value=1.7e-06  Score=77.76  Aligned_cols=111  Identities=18%  Similarity=0.253  Sum_probs=84.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~  261 (314)
                      -.|.+++|+|.|.+|+.+++.++.+|++|+++.+++++..++ +++|++.+ .   .+.+.+....+|+||++++.....
T Consensus       150 l~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~-~~~G~~~~-~---~~~l~~~l~~aDiVI~t~p~~~i~  224 (296)
T PRK08306        150 IHGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLARI-TEMGLSPF-H---LSELAEEVGKIDIIFNTIPALVLT  224 (296)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCCeee-c---HHHHHHHhCCCCEEEECCChhhhh
Confidence            368999999999999999999999999999999998776444 67887643 1   233445566899999998766545


Q ss_pred             HHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300          262 MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       262 ~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~  299 (314)
                      ...++.+++++.+++++..++...+.  ....++.++.
T Consensus       225 ~~~l~~~~~g~vIIDla~~pggtd~~--~a~~~Gv~~~  260 (296)
T PRK08306        225 KEVLSKMPPEALIIDLASKPGGTDFE--YAEKRGIKAL  260 (296)
T ss_pred             HHHHHcCCCCcEEEEEccCCCCcCee--ehhhCCeEEE
Confidence            67788899999999999887766653  3333444443

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.56  E-value=8.7e-07  Score=84.36  Aligned_cols=99  Identities=24%  Similarity=0.322  Sum_probs=76.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCC-C-------------HHH-------
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR-D-------------QDE-------  240 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~-~-------------~~~-------  240 (314)
                      .++++++|+|+|.+|+++++.++.+|++|+++++++++. +.++++|++.+.... +             .+.       
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rl-e~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVK-EQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            467999999999999999999999999999999998866 455779987633221 1             111       


Q ss_pred             HHHHcCCccEEEEcc---CCcc---cHHHHHHhhccCCEEEEEcCCC
Q 021300          241 MQAAMGTMDGIIDTV---SAVH---PLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       241 ~~~~~~~~d~v~d~~---g~~~---~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      +.+...++|++|+|+   |...   .....++.|++|+.+++++...
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~  287 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQ  287 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCC
Confidence            222335799999999   6533   5788899999999999998754

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.50  E-value=3.1e-08  Score=93.15  Aligned_cols=184  Identities=15%  Similarity=0.245  Sum_probs=118.8

Q ss_pred             cccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCc
Q 021300           69 VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF  148 (314)
Q Consensus        69 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~  148 (314)
                      .-|.|+++.+.+|++++++.-+|     .+.+  ||.|..|    ++.|.+....       |....+.|++++.+++ .
T Consensus        89 ~~~~~a~~hl~~Va~GldS~V~G-----E~qI--~gQvk~a----~~~a~~~~~~-------g~~l~~lf~~a~~~~k-~  149 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDSMVVG-----ETQI--LGQVKNA----YKVAQEEKTV-------GKVLERLFQKAFSVGK-R  149 (417)
T ss_pred             cCchHHHHHHHHHHhhhhhhhcC-----ChHH--HHHHHHH----HHHHHHcCCc-------hHHHHHHHHHHHHHhh-h
Confidence            57999999999999998874444     4444  8888888    6667665432       3456788999998876 4


Q ss_pred             eEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHc
Q 021300          149 VVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERL  227 (314)
Q Consensus       149 ~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~  227 (314)
                      +..- ..++..   .++....+.-.+....+ ..++++++|+|+|.+|..+++.++..| .+++++.++.++..++++++
T Consensus       150 vr~~-t~i~~~---~vSv~~~Av~la~~~~~-~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~  224 (417)
T TIGR01035       150 VRTE-TDISAG---AVSISSAAVELAERIFG-SLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL  224 (417)
T ss_pred             hhhh-cCCCCC---CcCHHHHHHHHHHHHhC-CccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            3321 112111   11111111112233333 367899999999999999999999999 58889999988877788888


Q ss_pred             CCcEEecCCCHHHHHHHcCCccEEEEccCCcccH--HHHHHh-hccC-C--EEEEEcCC
Q 021300          228 GADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL--MPLIGL-LKSQ-G--KLVLVGAP  280 (314)
Q Consensus       228 ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~--~~~~~~-l~~~-G--~~v~~G~~  280 (314)
                      |...+ ..   +...+...++|+||.|++....+  ...+.. +... +  .+++++.+
T Consensus       225 g~~~i-~~---~~l~~~l~~aDvVi~aT~s~~~ii~~e~l~~~~~~~~~~~~viDla~P  279 (417)
T TIGR01035       225 GGEAV-KF---EDLEEYLAEADIVISSTGAPHPIVSKEDVERALRERTRPLFIIDIAVP  279 (417)
T ss_pred             CCeEe-eH---HHHHHHHhhCCEEEECCCCCCceEcHHHHHHHHhcCCCCeEEEEeCCC
Confidence            87532 22   23334456899999999866432  122222 2221 2  56677754

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR00518 alaDH alanine dehydrogenase

Probab=98.46  E-value=3e-06  Score=78.46  Aligned_cols=99  Identities=21%  Similarity=0.261  Sum_probs=77.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEcc---CC--
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTV---SA--  257 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~---g~--  257 (314)
                      ++.+++|+|+|.+|+.+++.++.+|++|+++++++++.+++.+.++........+++.+.+....+|++|+++   +.  
T Consensus       166 ~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~~  245 (370)
T TIGR00518       166 EPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAKA  245 (370)
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCCC
Confidence            4566999999999999999999999999999999888777777777643334445556666667899999997   32  


Q ss_pred             cc-cHHHHHHhhccCCEEEEEcCCC
Q 021300          258 VH-PLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       258 ~~-~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      .. .....++.+++++.++.++...
T Consensus       246 p~lit~~~l~~mk~g~vIvDva~d~  270 (370)
T TIGR00518       246 PKLVSNSLVAQMKPGAVIVDVAIDQ  270 (370)
T ss_pred             CcCcCHHHHhcCCCCCEEEEEecCC
Confidence            11 2477888899999999998754

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.39  E-value=4.5e-06  Score=77.54  Aligned_cols=103  Identities=20%  Similarity=0.157  Sum_probs=78.0

Q ss_pred             hhhhHhc-CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccE
Q 021300          172 YSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG  250 (314)
Q Consensus       172 ~~~l~~~-~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~  250 (314)
                      +.++.+. .....|++|+|+|.|.+|+.+++.++.+|++|+++..++.+..++ ...|+.. ++.      .+...+.|+
T Consensus       182 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A-~~~G~~v-~~l------eeal~~aDV  253 (406)
T TIGR00936       182 IDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEA-AMDGFRV-MTM------EEAAKIGDI  253 (406)
T ss_pred             HHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHH-HhcCCEe-CCH------HHHHhcCCE
Confidence            3444333 334789999999999999999999999999999998888765444 4557632 211      123357899


Q ss_pred             EEEccCCcccHHH-HHHhhccCCEEEEEcCCCC
Q 021300          251 IIDTVSAVHPLMP-LIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       251 v~d~~g~~~~~~~-~~~~l~~~G~~v~~G~~~~  282 (314)
                      +|+++|+...+.. .+..+++++.++.+|....
T Consensus       254 VItaTG~~~vI~~~~~~~mK~GailiN~G~~~~  286 (406)
T TIGR00936       254 FITATGNKDVIRGEHFENMKDGAIVANIGHFDV  286 (406)
T ss_pred             EEECCCCHHHHHHHHHhcCCCCcEEEEECCCCc
Confidence            9999998876664 8889999999999998643

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PLN02494 adenosylhomocysteinase

Probab=98.36  E-value=5e-06  Score=78.03  Aligned_cols=109  Identities=16%  Similarity=0.191  Sum_probs=81.3

Q ss_pred             hhhhHhc-CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccE
Q 021300          172 YSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG  250 (314)
Q Consensus       172 ~~~l~~~-~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~  250 (314)
                      +.++.+. .....|++++|+|.|.+|..+++.++.+|++|+++.+++.+..++ ...|+..+ +      +.+....+|+
T Consensus       241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA-~~~G~~vv-~------leEal~~ADV  312 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQA-LMEGYQVL-T------LEDVVSEADI  312 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHH-HhcCCeec-c------HHHHHhhCCE
Confidence            4444333 334789999999999999999999999999999988887665444 35576532 1      1233456899


Q ss_pred             EEEccCCccc-HHHHHHhhccCCEEEEEcCCCCCcccch
Q 021300          251 IIDTVSAVHP-LMPLIGLLKSQGKLVLVGAPEKPLELPA  288 (314)
Q Consensus       251 v~d~~g~~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~  288 (314)
                      ++.++|+... ....++.|++++.++.+|.....++...
T Consensus       313 VI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~~eID~~a  351 (477)
T PLN02494        313 FVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLG  351 (477)
T ss_pred             EEECCCCccchHHHHHhcCCCCCEEEEcCCCCCccCHHH
Confidence            9999998765 4889999999999999999654444433

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.22  E-value=5.8e-06  Score=74.89  Aligned_cols=129  Identities=20%  Similarity=0.250  Sum_probs=87.7

Q ss_pred             CceEECCCCCCcccccccchhhhhhhhhhHhcCCC---CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHH
Q 021300          147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD---KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSE  222 (314)
Q Consensus       147 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~---~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~  222 (314)
                      ...+++|+.+..+.++... +...++.++......   .++.+|+|+|+|.+|..+++.++..|+ +++++.+++++..+
T Consensus       139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~  217 (311)
T cd05213         139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE  217 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            4666788888888776432 345555566444421   479999999999999999999998775 78888888888888


Q ss_pred             HHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHHHHHhhc--c-CC-EEEEEcCC
Q 021300          223 AIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLK--S-QG-KLVLVGAP  280 (314)
Q Consensus       223 ~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~--~-~G-~~v~~G~~  280 (314)
                      +++++|++. ++.   +...+....+|+||.+++...........++  + .+ .++.++.+
T Consensus       218 la~~~g~~~-~~~---~~~~~~l~~aDvVi~at~~~~~~~~~~~~~~~~~~~~~~viDlavP  275 (311)
T cd05213         218 LAKELGGNA-VPL---DELLELLNEADVVISATGAPHYAKIVERAMKKRSGKPRLIVDLAVP  275 (311)
T ss_pred             HHHHcCCeE-EeH---HHHHHHHhcCCEEEECCCCCchHHHHHHHHhhCCCCCeEEEEeCCC
Confidence            999999843 222   2233444579999999998764122222222  1 22 46677765

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=98.18  E-value=5.6e-05  Score=67.54  Aligned_cols=100  Identities=18%  Similarity=0.292  Sum_probs=77.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~  261 (314)
                      -.|++++|+|.|.+|.++++.++.+|++|+++.+++++..++ .++|...+ .   .+.+.+....+|+|++++......
T Consensus       149 l~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~-~~~g~~~~-~---~~~l~~~l~~aDiVint~P~~ii~  223 (287)
T TIGR02853       149 IHGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARI-TEMGLIPF-P---LNKLEEKVAEIDIVINTIPALVLT  223 (287)
T ss_pred             CCCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHCCCeee-c---HHHHHHHhccCCEEEECCChHHhC
Confidence            368999999999999999999999999999999988766554 45565432 1   233445566899999998755333


Q ss_pred             HHHHHhhccCCEEEEEcCCCCCccc
Q 021300          262 MPLIGLLKSQGKLVLVGAPEKPLEL  286 (314)
Q Consensus       262 ~~~~~~l~~~G~~v~~G~~~~~~~~  286 (314)
                      ...++.++++..++.++..++..+|
T Consensus       224 ~~~l~~~k~~aliIDlas~Pg~tdf  248 (287)
T TIGR02853       224 ADVLSKLPKHAVIIDLASKPGGTDF  248 (287)
T ss_pred             HHHHhcCCCCeEEEEeCcCCCCCCH
Confidence            5677888999999999987776666

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=98.13  E-value=4.8e-05  Score=65.06  Aligned_cols=111  Identities=15%  Similarity=0.284  Sum_probs=81.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC----cEEecCCCHHH----HHHH---cCCccE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA----DSFLVSRDQDE----MQAA---MGTMDG  250 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga----~~~v~~~~~~~----~~~~---~~~~d~  250 (314)
                      .++.++|.|+ +++|.+.++.+...|++++.+.|..+++++++.+++.    -..+|-.+.+.    +..+   .+.+|+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            3477888998 9999999999999999999999999999999999993    23345555543    2222   236999


Q ss_pred             EEEccCCc-------------------------ccHHHHHHhh--ccCCEEEEEcCCCCCcccchhhhhc
Q 021300          251 IIDTVSAV-------------------------HPLMPLIGLL--KSQGKLVLVGAPEKPLELPAFSLLM  293 (314)
Q Consensus       251 v~d~~g~~-------------------------~~~~~~~~~l--~~~G~~v~~G~~~~~~~~~~~~~~~  293 (314)
                      .+++.|..                         ......+..|  +..|.++.+|+-.+...++...+|.
T Consensus        85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~  154 (246)
T COG4221          85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYG  154 (246)
T ss_pred             EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccch
Confidence            99999843                         1233344444  4578999999977766666655443

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.13  E-value=1.9e-05  Score=69.32  Aligned_cols=131  Identities=24%  Similarity=0.306  Sum_probs=82.7

Q ss_pred             cceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC
Q 021300          138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS  216 (314)
Q Consensus       138 ~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~  216 (314)
                      |.+|.. +...++.++++++|..+. .+.+.. ....+...  ++++++||-+|+|. |..++.+++ .|+ +++.++.+
T Consensus        79 ~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~~~--~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis  151 (250)
T PRK00517         79 WEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALEKL--VLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDID  151 (250)
T ss_pred             CcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHHhh--cCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECC
Confidence            445544 667889999999888765 211111 12222222  47899999999987 888776655 566 59999999


Q ss_pred             hhhHHHHHHHc---CC-cEEecCCCHHHHHHHcCCccEEEEccCCc---ccHHHHHHhhccCCEEEEEcCCCC
Q 021300          217 PSKKSEAIERL---GA-DSFLVSRDQDEMQAAMGTMDGIIDTVSAV---HPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       217 ~~~~~~~~~~~---ga-~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      +...+.+.+.+   +. +.+.....       ...||+|+-+....   ..+..+.+.|+++|++++.|....
T Consensus       152 ~~~l~~A~~n~~~~~~~~~~~~~~~-------~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~~~  217 (250)
T PRK00517        152 PQAVEAARENAELNGVELNVYLPQG-------DLKADVIVANILANPLLELAPDLARLLKPGGRLILSGILEE  217 (250)
T ss_pred             HHHHHHHHHHHHHcCCCceEEEccC-------CCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECcHh
Confidence            87765554332   22 11111000       01599998766533   235678888999999999887543

>PRK08324 short chain dehydrogenase; Validated

Probab=98.09  E-value=3.4e-05  Score=77.36  Aligned_cols=133  Identities=20%  Similarity=0.218  Sum_probs=89.7

Q ss_pred             cccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhc--CCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEE
Q 021300          136 GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFY--GLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTV  212 (314)
Q Consensus       136 g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~  212 (314)
                      -++++|..+++..++.+ +..+.+++..            .+.  ....+|+++||.|+ |++|..+++.+...|++|++
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l------------~~~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl  451 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKL------------QRMPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVL  451 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhh------------hcCCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEE
Confidence            34577777777666666 5666666541            111  11246899999997 99999999999999999999


Q ss_pred             EeCChhhHHHHHHHcCC--c---EEecCCCHHHHHHH-------cCCccEEEEccCCc----------------------
Q 021300          213 ISTSPSKKSEAIERLGA--D---SFLVSRDQDEMQAA-------MGTMDGIIDTVSAV----------------------  258 (314)
Q Consensus       213 v~~~~~~~~~~~~~~ga--~---~~v~~~~~~~~~~~-------~~~~d~v~d~~g~~----------------------  258 (314)
                      ++++.++...+.+.++.  .   ...|-.+++.+.+.       .+++|++|+++|..                      
T Consensus       452 ~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~  531 (681)
T PRK08324        452 ADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT  531 (681)
T ss_pred             EeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            99998877777666653  1   12244454433322       24799999999831                      


Q ss_pred             ---ccHHHHHHhhcc---CCEEEEEcCCC
Q 021300          259 ---HPLMPLIGLLKS---QGKLVLVGAPE  281 (314)
Q Consensus       259 ---~~~~~~~~~l~~---~G~~v~~G~~~  281 (314)
                         ..++.+++.+++   +|+++.+++..
T Consensus       532 g~~~l~~~~~~~l~~~~~~g~iV~vsS~~  560 (681)
T PRK08324        532 GHFLVAREAVRIMKAQGLGGSIVFIASKN  560 (681)
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcc
Confidence               123344666655   68999998753

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=98.08  E-value=3.4e-05  Score=72.71  Aligned_cols=95  Identities=17%  Similarity=0.225  Sum_probs=75.1

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc
Q 021300          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (314)
Q Consensus       179 ~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~  258 (314)
                      +..-.|.+++|+|.|.+|..+++.++.+|++|+++.+++.+..++. ..|+..+       .+.++...+|+++.++|..
T Consensus       249 ~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~~~-------~leell~~ADIVI~atGt~  320 (476)
T PTZ00075        249 DVMIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQVV-------TLEDVVETADIFVTATGNK  320 (476)
T ss_pred             CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCceec-------cHHHHHhcCCEEEECCCcc
Confidence            4456899999999999999999999999999998888776553432 3465432       1234456799999999987


Q ss_pred             ccHH-HHHHhhccCCEEEEEcCCC
Q 021300          259 HPLM-PLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       259 ~~~~-~~~~~l~~~G~~v~~G~~~  281 (314)
                      ..+. ..++.|++++.++.+|...
T Consensus       321 ~iI~~e~~~~MKpGAiLINvGr~d  344 (476)
T PTZ00075        321 DIITLEHMRRMKNNAIVGNIGHFD  344 (476)
T ss_pred             cccCHHHHhccCCCcEEEEcCCCc
Confidence            7664 8999999999999999874

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=98.07  E-value=4.9e-06  Score=81.59  Aligned_cols=79  Identities=27%  Similarity=0.387  Sum_probs=58.2

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh--------------------hhHHHHHHHcCCcEEecCCC-HH
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP--------------------SKKSEAIERLGADSFLVSRD-QD  239 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~--------------------~~~~~~~~~~ga~~~v~~~~-~~  239 (314)
                      .++|++|+|+|+|++|+++++.++..|++|++++..+                    +...+.++++|++..++... .+
T Consensus       134 ~~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~~~  213 (564)
T PRK12771        134 PDTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVGED  213 (564)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEECCc
Confidence            5789999999999999999999999999998887431                    22334556789877666433 22


Q ss_pred             -HHHHHcCCccEEEEccCCcc
Q 021300          240 -EMQAAMGTMDGIIDTVSAVH  259 (314)
Q Consensus       240 -~~~~~~~~~d~v~d~~g~~~  259 (314)
                       .......++|.||+++|...
T Consensus       214 ~~~~~~~~~~D~Vi~AtG~~~  234 (564)
T PRK12771        214 ITLEQLEGEFDAVFVAIGAQL  234 (564)
T ss_pred             CCHHHHHhhCCEEEEeeCCCC
Confidence             12233457999999999653

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.00  E-value=1.6e-05  Score=62.95  Aligned_cols=96  Identities=20%  Similarity=0.345  Sum_probs=68.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCc--EEecCCCHHHHHHHcCCccEEEEccCCc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~--~~v~~~~~~~~~~~~~~~d~v~d~~g~~  258 (314)
                      -.+.+++|+|+|+.|.+++..+...|++ ++++.|+.++.+++.++++..  .++...+   +.+....+|++|.+++..
T Consensus        10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~---~~~~~~~~DivI~aT~~~   86 (135)
T PF01488_consen   10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED---LEEALQEADIVINATPSG   86 (135)
T ss_dssp             GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG---HCHHHHTESEEEE-SSTT
T ss_pred             cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH---HHHHHhhCCeEEEecCCC
Confidence            4689999999999999999999999995 999999999999999998533  2333333   224455799999999865


Q ss_pred             cc--HHHHHHhhcc-CCEEEEEcCC
Q 021300          259 HP--LMPLIGLLKS-QGKLVLVGAP  280 (314)
Q Consensus       259 ~~--~~~~~~~l~~-~G~~v~~G~~  280 (314)
                      ..  ....+....+ -+.+++++.+
T Consensus        87 ~~~i~~~~~~~~~~~~~~v~Dla~P  111 (135)
T PF01488_consen   87 MPIITEEMLKKASKKLRLVIDLAVP  111 (135)
T ss_dssp             STSSTHHHHTTTCHHCSEEEES-SS
T ss_pred             CcccCHHHHHHHHhhhhceeccccC
Confidence            31  2223332222 2688999865

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.79  E-value=0.00028  Score=59.29  Aligned_cols=96  Identities=29%  Similarity=0.347  Sum_probs=70.4

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHH---HHHcCCcEE-ecCCCHHHHHHHcCCccEEEEcc
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGADSF-LVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~---~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      .+++|++||=+|+|+ |+.++-+++..+ +|+.+.+.++=.+.+   .+.+|...+ +...|-..=......||.++-+.
T Consensus        69 ~~~~g~~VLEIGtGs-GY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~~~~aPyD~I~Vta  146 (209)
T COG2518          69 ELKPGDRVLEIGTGS-GYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKGWPEEAPYDRIIVTA  146 (209)
T ss_pred             CCCCCCeEEEECCCc-hHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccCCCCCCCcCEEEEee
Confidence            379999999999875 999999999888 999998887632222   467787433 33333111111123699999998


Q ss_pred             CCcccHHHHHHhhccCCEEEEE
Q 021300          256 SAVHPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       256 g~~~~~~~~~~~l~~~G~~v~~  277 (314)
                      +........++.|++||+++.-
T Consensus       147 aa~~vP~~Ll~QL~~gGrlv~P  168 (209)
T COG2518         147 AAPEVPEALLDQLKPGGRLVIP  168 (209)
T ss_pred             ccCCCCHHHHHhcccCCEEEEE
Confidence            8887789999999999998876

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.76  E-value=0.00017  Score=68.12  Aligned_cols=160  Identities=21%  Similarity=0.247  Sum_probs=101.4

Q ss_pred             cccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCc
Q 021300           69 VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF  148 (314)
Q Consensus        69 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~  148 (314)
                      .-|+|+++.+.+|++++.+.-+|+.-+       ||.|.    +-++.|.+...       .+....+.|++.+.+++  
T Consensus        91 ~~g~ea~~hl~~V~~GldS~V~GE~qI-------lgQvk----~a~~~a~~~g~-------~g~~l~~lf~~a~~~~k--  150 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDSMVLGEPQI-------LGQVK----DAYALAQEAGT-------VGTILNRLFQKAFSVAK--  150 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhhhhcCChHH-------HHHHH----HHHHHHHHcCC-------chHHHHHHHHHHHHHHh--
Confidence            469999999999999988755565432       22222    22333332211       12234556666555443  


Q ss_pred             eEECCCCCCcccccccchhhhhhhhhhHhcCC---CCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHH
Q 021300          149 VVRIPEGTPLDATAPLLCAGITVYSPLRFYGL---DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAI  224 (314)
Q Consensus       149 ~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~---~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~  224 (314)
                            .+..+.+. ...+...++.++.....   -.++.+++|+|+|.+|.++++.++..|+ +++++.+++++...++
T Consensus       151 ------~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la  223 (423)
T PRK00045        151 ------RVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELA  223 (423)
T ss_pred             ------hHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH
Confidence                  22222221 11123444445543321   2678999999999999999999999997 7888999988888888


Q ss_pred             HHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc
Q 021300          225 ERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (314)
Q Consensus       225 ~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~  259 (314)
                      +++|.+ +++.   +...+...++|+||.+++...
T Consensus       224 ~~~g~~-~~~~---~~~~~~l~~aDvVI~aT~s~~  254 (423)
T PRK00045        224 EEFGGE-AIPL---DELPEALAEADIVISSTGAPH  254 (423)
T ss_pred             HHcCCc-EeeH---HHHHHHhccCCEEEECCCCCC
Confidence            888864 2322   233344467999999998754

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=97.75  E-value=0.00014  Score=64.55  Aligned_cols=100  Identities=22%  Similarity=0.294  Sum_probs=66.9

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHH---HcCCcEE-ecCCCHHHHHHHcCCccEEEE
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIE---RLGADSF-LVSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~---~~ga~~~-v~~~~~~~~~~~~~~~d~v~d  253 (314)
                      .+++|++||.+|+|. |..+.++++..+.  +++.++.+++..+.+.+   .++.+.+ +...+...+....+.||+|+.
T Consensus        74 ~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~~~~~~fD~Vi~  152 (272)
T PRK11873         74 ELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALPVADNSVDVIIS  152 (272)
T ss_pred             cCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCCCCCCceeEEEE
Confidence            478999999999987 8888888887765  68899988877655533   2343222 111221111111246999886


Q ss_pred             cc------CCcccHHHHHHhhccCCEEEEEcCC
Q 021300          254 TV------SAVHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       254 ~~------g~~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      ..      .....+..+.+.|++||++++.+..
T Consensus       153 ~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~  185 (272)
T PRK11873        153 NCVINLSPDKERVFKEAFRVLKPGGRFAISDVV  185 (272)
T ss_pred             cCcccCCCCHHHHHHHHHHHcCCCcEEEEEEee
Confidence            53      1234588999999999999997654

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.75  E-value=0.00039  Score=60.92  Aligned_cols=114  Identities=11%  Similarity=0.195  Sum_probs=80.5

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE-----E--ecCCCHHHHHHHc----C---
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-----F--LVSRDQDEMQAAM----G---  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~-----~--v~~~~~~~~~~~~----~---  246 (314)
                      ..+.++||.|| +++|...+..+...|.+++++.|+.++.+++.+++.-..     +  +|-.+++.+.++.    .   
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            56789999998 999999999999999999999999999988888776321     2  2444554444332    2   


Q ss_pred             CccEEEEccCCcc-------------------------cHHHHHHhhc--cCCEEEEEcCCCCCcccchhhhhcCc
Q 021300          247 TMDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLVGAPEKPLELPAFSLLMGE  295 (314)
Q Consensus       247 ~~d~v~d~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~~~~~~~~~  295 (314)
                      .+|+.++++|-..                         .....+..|.  ..|.++.+|+..+..+.|...++.-.
T Consensus        84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~AT  159 (265)
T COG0300          84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSAT  159 (265)
T ss_pred             cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHH
Confidence            5999999998320                         1122333332  35899999998777777766554433

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.73  E-value=0.00076  Score=54.49  Aligned_cols=104  Identities=19%  Similarity=0.249  Sum_probs=71.7

Q ss_pred             hcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccC
Q 021300          177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVS  256 (314)
Q Consensus       177 ~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g  256 (314)
                      .....-.|.+++|+|-|-+|.-.++.++.+|++|++++.+|-+..++. .-|.+..       .+.+.....|++|-++|
T Consensus        16 ~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~v~-------~~~~a~~~adi~vtaTG   87 (162)
T PF00670_consen   16 ATNLMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFEVM-------TLEEALRDADIFVTATG   87 (162)
T ss_dssp             HH-S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-EEE--------HHHHTTT-SEEEE-SS
T ss_pred             cCceeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcEec-------CHHHHHhhCCEEEECCC
Confidence            344457899999999999999999999999999999999997766653 3365432       24456678999999999


Q ss_pred             Cccc-HHHHHHhhccCCEEEEEcCCCCCcccch
Q 021300          257 AVHP-LMPLIGLLKSQGKLVLVGAPEKPLELPA  288 (314)
Q Consensus       257 ~~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~  288 (314)
                      .... -...+..|+.+-.+..+|......+++.
T Consensus        88 ~~~vi~~e~~~~mkdgail~n~Gh~d~Eid~~~  120 (162)
T PF00670_consen   88 NKDVITGEHFRQMKDGAILANAGHFDVEIDVDA  120 (162)
T ss_dssp             SSSSB-HHHHHHS-TTEEEEESSSSTTSBTHHH
T ss_pred             CccccCHHHHHHhcCCeEEeccCcCceeEeecc
Confidence            8764 4678899999988888888665555544

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.73  E-value=0.00051  Score=66.45  Aligned_cols=104  Identities=17%  Similarity=0.179  Sum_probs=73.7

Q ss_pred             cCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc--------CC------c-EEecCCCHHHH
Q 021300          178 YGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--------GA------D-SFLVSRDQDEM  241 (314)
Q Consensus       178 ~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~--------ga------~-~~v~~~~~~~~  241 (314)
                      ..+.+.|.++||.|+ |.+|...++.+...|++|++++++.++...+.+.+        |.      . ...|-.+.+.+
T Consensus        74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI  153 (576)
T PLN03209         74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQI  153 (576)
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHH
Confidence            334689999999998 99999999999889999999999988766554322        21      1 12355666677


Q ss_pred             HHHcCCccEEEEccCCcc---------------cHHHHHHhhcc--CCEEEEEcCCC
Q 021300          242 QAAMGTMDGIIDTVSAVH---------------PLMPLIGLLKS--QGKLVLVGAPE  281 (314)
Q Consensus       242 ~~~~~~~d~v~d~~g~~~---------------~~~~~~~~l~~--~G~~v~~G~~~  281 (314)
                      .+..+++|+||.++|...               ....+++.+..  .++||.++...
T Consensus       154 ~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig  210 (576)
T PLN03209        154 GPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG  210 (576)
T ss_pred             HHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence            777788999999987531               12334444433  36899998754

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=97.69  E-value=0.00033  Score=61.80  Aligned_cols=98  Identities=19%  Similarity=0.235  Sum_probs=81.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEcc--CCc--
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTV--SAV--  258 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~--g~~--  258 (314)
                      +..+|.|+|+|.+|.-++.+|..+|++|.+.+.+.+|.+.+-..|+.+.-.-++.+..+.+...+.|++|.++  ++.  
T Consensus       167 ~~~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgaka  246 (371)
T COG0686         167 LPAKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKA  246 (371)
T ss_pred             CCccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCC
Confidence            3456778899999999999999999999999999999988877788765556778888888888999999875  211  


Q ss_pred             --ccHHHHHHhhccCCEEEEEcCC
Q 021300          259 --HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       259 --~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                        -+....++.|+|++.++++...
T Consensus       247 PkLvt~e~vk~MkpGsVivDVAiD  270 (371)
T COG0686         247 PKLVTREMVKQMKPGSVIVDVAID  270 (371)
T ss_pred             ceehhHHHHHhcCCCcEEEEEEEc
Confidence              2467789999999999999764

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.66  E-value=0.00057  Score=56.52  Aligned_cols=92  Identities=25%  Similarity=0.318  Sum_probs=70.4

Q ss_pred             EEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHHcCCccEEEEccCCc----cc
Q 021300          187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAV----HP  260 (314)
Q Consensus       187 vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~g~~----~~  260 (314)
                      |+|+|+ |.+|...++.+...|.+|++++|++++..+   ..+.+.+ .|..+++.+.+...++|.||.+.|..    ..
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~   77 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDA   77 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcccccc
Confidence            689998 999999999999999999999999987755   3344433 35677778888888999999999842    23


Q ss_pred             HHHHHHhhccCC--EEEEEcCCC
Q 021300          261 LMPLIGLLKSQG--KLVLVGAPE  281 (314)
Q Consensus       261 ~~~~~~~l~~~G--~~v~~G~~~  281 (314)
                      ....++.++..|  +++.++...
T Consensus        78 ~~~~~~a~~~~~~~~~v~~s~~~  100 (183)
T PF13460_consen   78 AKNIIEAAKKAGVKRVVYLSSAG  100 (183)
T ss_dssp             HHHHHHHHHHTTSSEEEEEEETT
T ss_pred             cccccccccccccccceeeeccc
Confidence            556666665544  788776543

...

>PRK12742 oxidoreductase; Provisional

Probab=97.59  E-value=0.0012  Score=56.77  Aligned_cols=99  Identities=19%  Similarity=0.284  Sum_probs=67.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-ChhhHHHHHHHcCCcEE-ecCCCHHHHHHH---cCCccEEEEccC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSF-LVSRDQDEMQAA---MGTMDGIIDTVS  256 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~-~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~---~~~~d~v~d~~g  256 (314)
                      ++.++||.|+ |++|...++.+...|++++++.+ .+++.+++.++++...+ .|..+.+.+.+.   .+.+|++|+++|
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag   84 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG   84 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence            4689999997 99999999999999999887765 44555566666665543 344454443332   246999999987


Q ss_pred             Ccc-------------------------cHHHHHHhhccCCEEEEEcCCC
Q 021300          257 AVH-------------------------PLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       257 ~~~-------------------------~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      ...                         ....++..++.+|+++.+++..
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~  134 (237)
T PRK12742         85 IAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN  134 (237)
T ss_pred             CCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence            421                         0123344556689999987754

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.55  E-value=0.00086  Score=59.27  Aligned_cols=113  Identities=17%  Similarity=0.297  Sum_probs=77.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcC-Cc-EEe---cCCCHHH-------HHHHc
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLG-AD-SFL---VSRDQDE-------MQAAM  245 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~g-a~-~~v---~~~~~~~-------~~~~~  245 (314)
                      ..|.+|+|.|| +++|.+.+.-....|++++.+++..++.++..+   +.+ .+ ..+   |-.+.+.       +....
T Consensus        10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f   89 (282)
T KOG1205|consen   10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF   89 (282)
T ss_pred             hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence            46788999998 999998888888899999888888776655422   333 33 222   2333332       23344


Q ss_pred             CCccEEEEccCCc-------------------------ccHHHHHHhhccC--CEEEEEcCCCCCcccchhhhhcC
Q 021300          246 GTMDGIIDTVSAV-------------------------HPLMPLIGLLKSQ--GKLVLVGAPEKPLELPAFSLLMG  294 (314)
Q Consensus       246 ~~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~--G~~v~~G~~~~~~~~~~~~~~~~  294 (314)
                      +++|+.+++.|-.                         .....+++.|++.  |+|+.+++-.+...+|...++.-
T Consensus        90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~A  165 (282)
T KOG1205|consen   90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSA  165 (282)
T ss_pred             CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccch
Confidence            6899999998822                         2345577777543  99999999888777777654443

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.53  E-value=0.0012  Score=61.06  Aligned_cols=99  Identities=25%  Similarity=0.299  Sum_probs=75.8

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcC--C-cEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLG--A-DSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~g--a-~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      .++||+|+|.+|+.+++.+...+ .+|++.+|+.++..++....+  . ...+|-.+.+.+.++..++|+||++.+....
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~~   81 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFVD   81 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchhh
Confidence            47899999999999999988888 799999999998888865532  2 3456778888888888888999999987654


Q ss_pred             HHHHHHhhccCCEEEEEcCCCCC
Q 021300          261 LMPLIGLLKSQGKLVLVGAPEKP  283 (314)
Q Consensus       261 ~~~~~~~l~~~G~~v~~G~~~~~  283 (314)
                      +..+-.+++.+=-+++......+
T Consensus        82 ~~i~ka~i~~gv~yvDts~~~~~  104 (389)
T COG1748          82 LTILKACIKTGVDYVDTSYYEEP  104 (389)
T ss_pred             HHHHHHHHHhCCCEEEcccCCch
Confidence            54444555666567776655443

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.52  E-value=0.0018  Score=54.64  Aligned_cols=99  Identities=16%  Similarity=0.217  Sum_probs=68.3

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHH---HHHcC-CcE--EecCCCHHHHHHHcCCccEE
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEA---IERLG-ADS--FLVSRDQDEMQAAMGTMDGI  251 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~---~~~~g-a~~--~v~~~~~~~~~~~~~~~d~v  251 (314)
                      .+.+++++|-+|+|. |.+++.+++..+  .+++.++.+++..+.+   .+.++ .+.  ++..+..+.+....+.+|.|
T Consensus        37 ~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~~D~V  115 (198)
T PRK00377         37 RLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEKFDRI  115 (198)
T ss_pred             CCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCCCCEE
Confidence            378999999999987 888899888754  5899999998766543   23456 322  22222234444445689999


Q ss_pred             EEccCCc---ccHHHHHHhhccCCEEEEEcC
Q 021300          252 IDTVSAV---HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       252 ~d~~g~~---~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      |...+..   ..+..+.+.|+++|+++..-.
T Consensus       116 ~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  146 (198)
T PRK00377        116 FIGGGSEKLKEIISASWEIIKKGGRIVIDAI  146 (198)
T ss_pred             EECCCcccHHHHHHHHHHHcCCCcEEEEEee
Confidence            9865432   246677888999999986433

>PRK05872 short chain dehydrogenase; Provisional

Probab=97.51  E-value=0.0026  Score=57.14  Aligned_cols=75  Identities=24%  Similarity=0.345  Sum_probs=57.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--cEE---ecCCCHHHHHHH-------cCCcc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DSF---LVSRDQDEMQAA-------MGTMD  249 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~~~---v~~~~~~~~~~~-------~~~~d  249 (314)
                      .|.++||.|+ |++|..+++.+...|++|+++.++.++.+++.++++.  +..   .|-.+.+.+...       .+.+|
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   87 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID   87 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999997 9999999999999999999999998888777777752  222   344554433222       25799


Q ss_pred             EEEEccCC
Q 021300          250 GIIDTVSA  257 (314)
Q Consensus       250 ~v~d~~g~  257 (314)
                      ++|++.|.
T Consensus        88 ~vI~nAG~   95 (296)
T PRK05872         88 VVVANAGI   95 (296)
T ss_pred             EEEECCCc
Confidence            99999984

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.51  E-value=0.0015  Score=56.26  Aligned_cols=99  Identities=22%  Similarity=0.345  Sum_probs=68.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC---cEE--ecCCCHHHHHHH-------cCCcc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA---DSF--LVSRDQDEMQAA-------MGTMD  249 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga---~~~--v~~~~~~~~~~~-------~~~~d  249 (314)
                      ++++++|.|+ |.+|..+++.+...|++|+++++++++..++.+++..   ...  .|-.+++.+.+.       .+++|
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   83 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID   83 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4689999997 9999999999999999999999998877665444321   121  233444332221       24689


Q ss_pred             EEEEccCCcc-----------------------cHHHHHHhhccCCEEEEEcCCC
Q 021300          250 GIIDTVSAVH-----------------------PLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       250 ~v~d~~g~~~-----------------------~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      .++.+.+...                       .++..++.++++|+++.+++..
T Consensus        84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  138 (238)
T PRK05786         84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS  138 (238)
T ss_pred             EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence            9999887421                       1344556667789999998754

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.50  E-value=0.001  Score=55.73  Aligned_cols=111  Identities=19%  Similarity=0.206  Sum_probs=79.1

Q ss_pred             CCCCEEEEEcC--ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-EEecCCCHHHHHHHc--------CCccE
Q 021300          182 KPGMHVGVVGL--GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAAM--------GTMDG  250 (314)
Q Consensus       182 ~~g~~vlI~Ga--g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~-~~v~~~~~~~~~~~~--------~~~d~  250 (314)
                      .....|||.|+  |++|.+.+.-....|+.|+++.|.-++...+..++|.. .-+|-.+++.+.+..        ++.|+
T Consensus         5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~   84 (289)
T KOG1209|consen    5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL   84 (289)
T ss_pred             cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence            45577899874  99999988888888999999999999998998888853 234555554433322        36899


Q ss_pred             EEEccCCccc------------------------HHH--HHHhhccCCEEEEEcCCCCCcccchhhhh
Q 021300          251 IIDTVSAVHP------------------------LMP--LIGLLKSQGKLVLVGAPEKPLELPAFSLL  292 (314)
Q Consensus       251 v~d~~g~~~~------------------------~~~--~~~~l~~~G~~v~~G~~~~~~~~~~~~~~  292 (314)
                      .++++|..-+                        +..  ...+++..|++|.+|+..+-.++|...++
T Consensus        85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iY  152 (289)
T KOG1209|consen   85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIY  152 (289)
T ss_pred             EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhh
Confidence            9998884310                        111  23355889999999998766666664433

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.47  E-value=0.00066  Score=56.31  Aligned_cols=109  Identities=18%  Similarity=0.259  Sum_probs=71.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc---
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---  258 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---  258 (314)
                      -.|.+|.|+|.|.+|...++.++.+|++|+++.+........ ...+...    .   .+.++....|+|+.+....   
T Consensus        34 l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~~~~~~~----~---~l~ell~~aDiv~~~~plt~~T  105 (178)
T PF02826_consen   34 LRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGA-DEFGVEY----V---SLDELLAQADIVSLHLPLTPET  105 (178)
T ss_dssp             STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHH-HHTTEEE----S---SHHHHHHH-SEEEE-SSSSTTT
T ss_pred             cCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhc-cccccee----e---ehhhhcchhhhhhhhhcccccc
Confidence            578999999999999999999999999999999998755322 3444321    1   2223444589988887621   


Q ss_pred             --ccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300          259 --HPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       259 --~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~  299 (314)
                        ..-...+..|+++..+|.++.. +-++-+...-.+++.++.
T Consensus       106 ~~li~~~~l~~mk~ga~lvN~aRG-~~vde~aL~~aL~~g~i~  147 (178)
T PF02826_consen  106 RGLINAEFLAKMKPGAVLVNVARG-ELVDEDALLDALESGKIA  147 (178)
T ss_dssp             TTSBSHHHHHTSTTTEEEEESSSG-GGB-HHHHHHHHHTTSEE
T ss_pred             ceeeeeeeeeccccceEEEeccch-hhhhhhHHHHHHhhccCc
Confidence              1245678899999999998873 223333333333444444

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=97.47  E-value=0.00086  Score=50.66  Aligned_cols=94  Identities=28%  Similarity=0.336  Sum_probs=64.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHH-HCCCeEEEEeCChhhHHHHHHHc---C--CcEEecCCCHHHHHHHcCCccEEEEcc-
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSKKSEAIERL---G--ADSFLVSRDQDEMQAAMGTMDGIIDTV-  255 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~-~~g~~vi~v~~~~~~~~~~~~~~---g--a~~~v~~~~~~~~~~~~~~~d~v~d~~-  255 (314)
                      ||.+||-+|+|. |..++.+++ ..+++++.++.+++..+.+.+..   +  ...-+...+........+.||+|+... 
T Consensus         1 p~~~vLDlGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~   79 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFLEPFDLVICSGF   79 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTSSCEEEEEECSG
T ss_pred             CCCEEEEEcCcC-CHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccCCCCCEEEECCC
Confidence            688999999875 778888888 46889999999998876666655   2  122222233222223344799999877 


Q ss_pred             CCc---------ccHHHHHHhhccCCEEEEE
Q 021300          256 SAV---------HPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       256 g~~---------~~~~~~~~~l~~~G~~v~~  277 (314)
                      ...         ..+..+.+.|+|+|+++.-
T Consensus        80 ~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~  110 (112)
T PF12847_consen   80 TLHFLLPLDERRRVLERIRRLLKPGGRLVIN  110 (112)
T ss_dssp             SGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence            221         1267788999999998863

...

>PRK06182 short chain dehydrogenase; Validated

Probab=97.45  E-value=0.0027  Score=56.15  Aligned_cols=74  Identities=22%  Similarity=0.297  Sum_probs=53.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHH-------cCCccEEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAA-------MGTMDGIID  253 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~-------~~~~d~v~d  253 (314)
                      ++.+++|.|+ |.+|...++.+...|++|+++.++.++..++. ..+...+ .|-.+++.+.+.       .+++|++|+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~   80 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN   80 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            3578999997 99999999999889999999999987765553 3344332 355555443332       247999999


Q ss_pred             ccCC
Q 021300          254 TVSA  257 (314)
Q Consensus       254 ~~g~  257 (314)
                      +.|.
T Consensus        81 ~ag~   84 (273)
T PRK06182         81 NAGY   84 (273)
T ss_pred             CCCc
Confidence            9884

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.43  E-value=0.0019  Score=57.87  Aligned_cols=98  Identities=27%  Similarity=0.253  Sum_probs=63.1

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHc---CCc-EEecCCCHHHHHHHcCCccEEEEcc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERL---GAD-SFLVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~---ga~-~~v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      .++|++||-+|+|. |..++.+++ .|+ +++.++.++...+.+.+..   +.. .+..... +......++||+|+.+.
T Consensus       157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~~~~~~~~~fDlVvan~  233 (288)
T TIGR00406       157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-YLEQPIEGKADVIVANI  233 (288)
T ss_pred             cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-ccccccCCCceEEEEec
Confidence            46889999999987 877777666 455 8999999887664443322   221 1111111 11112235799999765


Q ss_pred             CCc---ccHHHHHHhhccCCEEEEEcCCC
Q 021300          256 SAV---HPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       256 g~~---~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      ...   ..+..+.+.|+++|.++..|...
T Consensus       234 ~~~~l~~ll~~~~~~LkpgG~li~sgi~~  262 (288)
T TIGR00406       234 LAEVIKELYPQFSRLVKPGGWLILSGILE  262 (288)
T ss_pred             CHHHHHHHHHHHHHHcCCCcEEEEEeCcH
Confidence            432   23566788999999999988653

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.43  E-value=0.0018  Score=57.52  Aligned_cols=96  Identities=18%  Similarity=0.290  Sum_probs=73.6

Q ss_pred             ccchhhhhhhhhhHhcCCCCCCCEEEEEcCCh-HHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (314)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~-vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~  241 (314)
                      .+||+..+....+++...--.|.+++|+|.|. +|.-++.++...|++|++..+...                     .+
T Consensus       137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~l  195 (286)
T PRK14175        137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------DM  195 (286)
T ss_pred             CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hH
Confidence            46777777777777665446899999999855 999999999999999988765431                     22


Q ss_pred             HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      .+....+|+||-++|.+..+..  +.++++-.++.+|.+.
T Consensus       196 ~~~~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~  233 (286)
T PRK14175        196 ASYLKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP  233 (286)
T ss_pred             HHHHhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence            3445669999999998864444  4688999999999865

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.42  E-value=0.0026  Score=55.85  Aligned_cols=99  Identities=16%  Similarity=0.197  Sum_probs=68.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHH-------cCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~-------~~~~d~v  251 (314)
                      .+.++||.|+ |.+|...++.+...|++|+++.++.++.+++.++++....   .|-.+.+.+.++       .+.+|++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   84 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL   84 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4678999997 9999999999999999999999998777777777664321   244444333222       2468999


Q ss_pred             EEccCCcc------------------------cHHHHHHhh-ccCCEEEEEcCCC
Q 021300          252 IDTVSAVH------------------------PLMPLIGLL-KSQGKLVLVGAPE  281 (314)
Q Consensus       252 ~d~~g~~~------------------------~~~~~~~~l-~~~G~~v~~G~~~  281 (314)
                      +.+.|...                        ..+.+++.| +.+|+++.+++..
T Consensus        85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~  139 (261)
T PRK08265         85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSIS  139 (261)
T ss_pred             EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchh
Confidence            99987420                        122233444 5678999998753

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.41  E-value=0.0033  Score=57.48  Aligned_cols=75  Identities=21%  Similarity=0.353  Sum_probs=55.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.++||.|+ |++|.+.++.+...|++|+++.+++++.+++.++   .|.+..   .|-.+++.+.++       .+.+
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI   85 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999998 9999999999999999999999998877655443   354432   245555444433       2579


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|+++|.
T Consensus        86 D~lVnnAG~   94 (330)
T PRK06139         86 DVWVNNVGV   94 (330)
T ss_pred             CEEEECCCc
Confidence            999999983

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.39  E-value=0.00087  Score=55.83  Aligned_cols=74  Identities=16%  Similarity=0.200  Sum_probs=57.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC--CcEEecCCCHHHHHHH----c---CCccEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG--ADSFLVSRDQDEMQAA----M---GTMDGII  252 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g--a~~~v~~~~~~~~~~~----~---~~~d~v~  252 (314)
                      -|.+|||.|+ +++|+..++-...+|-+||+..|++++..+......  ...+.|-.|.+.++++    .   ...++++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli   83 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI   83 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence            4789999875 999999999999999999999999999988866655  2455566665533333    2   3589999


Q ss_pred             EccC
Q 021300          253 DTVS  256 (314)
Q Consensus       253 d~~g  256 (314)
                      +++|
T Consensus        84 NNAG   87 (245)
T COG3967          84 NNAG   87 (245)
T ss_pred             eccc
Confidence            9988

>PRK06500 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.0038  Score=54.08  Aligned_cols=75  Identities=20%  Similarity=0.316  Sum_probs=55.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHH-------HHHcCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEM-------QAAMGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~-------~~~~~~~d~v  251 (314)
                      ++.+++|.|+ |.+|...++.+...|++++++.++.+...++.++++.+..   .|..+.+.+       .+..+++|++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4678999997 9999999999999999999999987777777677775422   233333322       2223479999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      |.+.|.
T Consensus        85 i~~ag~   90 (249)
T PRK06500         85 FINAGV   90 (249)
T ss_pred             EECCCC
Confidence            999874

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.34  E-value=0.0043  Score=56.80  Aligned_cols=100  Identities=17%  Similarity=0.313  Sum_probs=68.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.+++|.|+ |++|..+++.+...|++|+++.+++++.+++.++   .|.+..   .|-.+++.+.++       .+.+
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i   86 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI   86 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            4678999997 9999999999999999999999988766555443   354332   344555433332       2479


Q ss_pred             cEEEEccCCcc-------------------------cHHHHHHhhcc--CCEEEEEcCCCC
Q 021300          249 DGIIDTVSAVH-------------------------PLMPLIGLLKS--QGKLVLVGAPEK  282 (314)
Q Consensus       249 d~v~d~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~G~~~~  282 (314)
                      |++|+++|...                         ....+++.+++  .|+++.+++..+
T Consensus        87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~  147 (334)
T PRK07109         87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA  147 (334)
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhh
Confidence            99999988421                         12234555644  589999987543

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.33  E-value=0.0044  Score=52.05  Aligned_cols=99  Identities=19%  Similarity=0.186  Sum_probs=65.7

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC----CcE-EecCCCHHHHHHHcCCccEEEEcc
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG----ADS-FLVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g----a~~-~v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      ..+.+++|+|+ |.+|..++..+...|++++++.++.++.+++.+.+.    ... ..+..+.+.+.+...++|+||.++
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at  105 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG  105 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence            46789999997 999998888888889999999999887777766543    221 223445555555667899999988


Q ss_pred             CCcccHHHHHH-hhccCCEEEEEcCC
Q 021300          256 SAVHPLMPLIG-LLKSQGKLVLVGAP  280 (314)
Q Consensus       256 g~~~~~~~~~~-~l~~~G~~v~~G~~  280 (314)
                      ........... ..+++-.++++..+
T Consensus       106 ~~g~~~~~~~~~~~~~~~vv~D~~~~  131 (194)
T cd01078         106 AAGVELLEKLAWAPKPLAVAADVNAV  131 (194)
T ss_pred             CCCceechhhhcccCceeEEEEccCC
Confidence            75532112222 22333346666554

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.30  E-value=0.003  Score=50.75  Aligned_cols=98  Identities=22%  Similarity=0.249  Sum_probs=68.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCcE-EecCCCHHHHHHHcCCccEEEEccCCcc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~ga~~-~v~~~~~~~~~~~~~~~d~v~d~~g~~~  259 (314)
                      ..+.+++|+|+|.+|...++.+...| .+++++.++.++.+++.++++... .....+   ..+..+++|+|+.+++...
T Consensus        17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dvvi~~~~~~~   93 (155)
T cd01065          17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD---LEELLAEADLIINTTPVGM   93 (155)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc---hhhccccCCEEEeCcCCCC
Confidence            45788999999999999999888886 688889999888888777777531 011112   1233567999999987653


Q ss_pred             c----HHHHHHhhccCCEEEEEcCCCC
Q 021300          260 P----LMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       260 ~----~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      .    .......++++..++.++..+.
T Consensus        94 ~~~~~~~~~~~~~~~~~~v~D~~~~~~  120 (155)
T cd01065          94 KPGDELPLPPSLLKPGGVVYDVVYNPL  120 (155)
T ss_pred             CCCCCCCCCHHHcCCCCEEEEcCcCCC
Confidence            1    1122345678888888876543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.0069  Score=53.34  Aligned_cols=99  Identities=13%  Similarity=0.214  Sum_probs=67.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCcE---EecCCCHHHHHHH------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADS---FLVSRDQDEMQAA------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----ga~~---~v~~~~~~~~~~~------~~~~  248 (314)
                      .|.++||.|+ +++|.+.++.+...|++|+++.++.++.+++.+++    +.+.   ..|-.+++.+.++      .+.+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i   86 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP   86 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence            4788999987 99999999999999999999999887766655443    3221   1244444333222      1469


Q ss_pred             cEEEEccCCcc-------------------------cHHHHHHhhcc--CCEEEEEcCCC
Q 021300          249 DGIIDTVSAVH-------------------------PLMPLIGLLKS--QGKLVLVGAPE  281 (314)
Q Consensus       249 d~v~d~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~G~~~  281 (314)
                      |+++.+.|...                         ....+++.|+.  .|+++.+++..
T Consensus        87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~  146 (263)
T PRK08339         87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVA  146 (263)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCcc
Confidence            99999987421                         13345556643  48999998754

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.27  E-value=0.0068  Score=53.56  Aligned_cols=72  Identities=19%  Similarity=0.227  Sum_probs=52.2

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHH-------cCCccEEEEcc
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAA-------MGTMDGIIDTV  255 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~-------~~~~d~v~d~~  255 (314)
                      .++||.|+ |++|...++.+...|++|++++++.++..++. ..+...+ .|..+.+.+.++       .+++|++|++.
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a   80 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA-AAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA   80 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            46889987 99999999999989999999999887665553 3454433 355555433322       24699999999


Q ss_pred             CC
Q 021300          256 SA  257 (314)
Q Consensus       256 g~  257 (314)
                      |.
T Consensus        81 g~   82 (274)
T PRK05693         81 GY   82 (274)
T ss_pred             CC
Confidence            83

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.26  E-value=0.0052  Score=50.39  Aligned_cols=97  Identities=21%  Similarity=0.278  Sum_probs=67.7

Q ss_pred             cccchhhhhhhhhhHhcCCCCCCCEEEEEcCCh-HHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 021300          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (314)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~-vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~  240 (314)
                      ...|+...++...++....--.|.+++|+|+|. +|..++..++..|++++++.+..+                     .
T Consensus        22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~---------------------~   80 (168)
T cd01080          22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK---------------------N   80 (168)
T ss_pred             CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch---------------------h
Confidence            344555555555555554346899999999986 599899999999998888777632                     1


Q ss_pred             HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       241 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      +.+....+|+||-+++....+..  +.++++-.++.++.+.
T Consensus        81 l~~~l~~aDiVIsat~~~~ii~~--~~~~~~~viIDla~pr  119 (168)
T cd01080          81 LKEHTKQADIVIVAVGKPGLVKG--DMVKPGAVVIDVGINR  119 (168)
T ss_pred             HHHHHhhCCEEEEcCCCCceecH--HHccCCeEEEEccCCC
Confidence            22344568999999988663333  3467777788888864

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.25  E-value=0.0058  Score=54.21  Aligned_cols=99  Identities=14%  Similarity=0.229  Sum_probs=67.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHH----HH---c-CCccEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQ----AA---M-GTMDGII  252 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~----~~---~-~~~d~v~  252 (314)
                      .+.++||.|+ |++|...++.+...|++|+++++++++..++. ..+.+.+ .|-.+.+.+.    +.   . +.+|+++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li   81 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF   81 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence            4578999998 99999999998889999999999988776664 3454433 3555543322    22   1 3689999


Q ss_pred             EccCCcc-------------------------cHHHHHHhhcc--CCEEEEEcCCCC
Q 021300          253 DTVSAVH-------------------------PLMPLIGLLKS--QGKLVLVGAPEK  282 (314)
Q Consensus       253 d~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~G~~~~  282 (314)
                      ++.|...                         ....+++.+++  .|+++.+++..+
T Consensus        82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~  138 (277)
T PRK05993         82 NNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILG  138 (277)
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhh
Confidence            9986321                         02345555643  478999977543

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.24  E-value=0.00093  Score=56.82  Aligned_cols=98  Identities=32%  Similarity=0.383  Sum_probs=63.9

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHH---HHHcCCc-EEecCCCHHHHHHHcCCccEEEEc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEA---IERLGAD-SFLVSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~---~~~~ga~-~~v~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      +++|++||-+|+|. |+.++-+++..|.  +|+.+.+.++-.+.+   .++++.+ ..+...+...-......||.++-+
T Consensus        70 l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~~apfD~I~v~  148 (209)
T PF01135_consen   70 LKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPEEAPFDRIIVT  148 (209)
T ss_dssp             C-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGGG-SEEEEEES
T ss_pred             cCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhccccCCCcCEEEEe
Confidence            89999999999875 8888888888764  688888887643333   3445553 223333322111223479999998


Q ss_pred             cCCcccHHHHHHhhccCCEEEEE-cC
Q 021300          255 VSAVHPLMPLIGLLKSQGKLVLV-GA  279 (314)
Q Consensus       255 ~g~~~~~~~~~~~l~~~G~~v~~-G~  279 (314)
                      .+........++.|++||+++.. +.
T Consensus       149 ~a~~~ip~~l~~qL~~gGrLV~pi~~  174 (209)
T PF01135_consen  149 AAVPEIPEALLEQLKPGGRLVAPIGQ  174 (209)
T ss_dssp             SBBSS--HHHHHTEEEEEEEEEEESS
T ss_pred             eccchHHHHHHHhcCCCcEEEEEEcc
Confidence            88777678899999999999985 44

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=97.24  E-value=0.0062  Score=51.68  Aligned_cols=113  Identities=16%  Similarity=0.060  Sum_probs=72.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~  261 (314)
                      .|.+|||+|+|.+|...++.+...|++|+++..... ...++.+ .|- ......+.+  .....++++||-++++...-
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~-~~~-i~~~~~~~~--~~dl~~~~lVi~at~d~~ln   83 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLAE-QGG-ITWLARCFD--ADILEGAFLVIAATDDEELN   83 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHH-cCC-EEEEeCCCC--HHHhCCcEEEEECCCCHHHH
Confidence            467999999999999999999999999998877643 3344433 332 111122211  12235799999999988645


Q ss_pred             HHHHHhhccCCEEEEEcCCCCCcccchhhhhcC-ceeEe
Q 021300          262 MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMG-EEEDS  299 (314)
Q Consensus       262 ~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~  299 (314)
                      .......+..|..+.+...+...+|-...+..+ .++|.
T Consensus        84 ~~i~~~a~~~~ilvn~~d~~e~~~f~~pa~~~~g~l~ia  122 (205)
T TIGR01470        84 RRVAHAARARGVPVNVVDDPELCSFIFPSIVDRSPVVVA  122 (205)
T ss_pred             HHHHHHHHHcCCEEEECCCcccCeEEEeeEEEcCCEEEE
Confidence            556666667788777655444444444444443 34444

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK07825 short chain dehydrogenase; Provisional

Probab=97.21  E-value=0.0071  Score=53.40  Aligned_cols=74  Identities=22%  Similarity=0.356  Sum_probs=54.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-CcE-EecCCCHHHHH-------HHcCCccEEEE
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADS-FLVSRDQDEMQ-------AAMGTMDGIID  253 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-a~~-~v~~~~~~~~~-------~~~~~~d~v~d  253 (314)
                      +.++||.|+ |++|...++.+...|++++++.+++++..++.++++ ... ..|-.+++.+.       +..+++|+++.
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN   84 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            578999998 999999999888899999999999887777766665 322 23445554322       22347999999


Q ss_pred             ccCC
Q 021300          254 TVSA  257 (314)
Q Consensus       254 ~~g~  257 (314)
                      +.|.
T Consensus        85 ~ag~   88 (273)
T PRK07825         85 NAGV   88 (273)
T ss_pred             CCCc
Confidence            9874

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.21  E-value=0.0045  Score=57.73  Aligned_cols=111  Identities=25%  Similarity=0.209  Sum_probs=72.7

Q ss_pred             cchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC-cEEecCCCHHHHH
Q 021300          164 LLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-DSFLVSRDQDEMQ  242 (314)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga-~~~v~~~~~~~~~  242 (314)
                      +..+-...+..+.....+++|++||-+|+| .|..+..+++..|++|+.++.+++..+.+.+.... ..-+...+.   .
T Consensus       148 L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~---~  223 (383)
T PRK11705        148 LEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDY---R  223 (383)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECch---h
Confidence            333444445544444457999999999986 47778888888899999999999887666554321 111111221   2


Q ss_pred             HHcCCccEEEE-----ccCC---cccHHHHHHhhccCCEEEEEc
Q 021300          243 AAMGTMDGIID-----TVSA---VHPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       243 ~~~~~~d~v~d-----~~g~---~~~~~~~~~~l~~~G~~v~~G  278 (314)
                      ...+.||.|+.     .+|.   ...+..+.+.|+|+|++++..
T Consensus       224 ~l~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        224 DLNGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             hcCCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            23457998864     3343   234778888999999988753

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.21  E-value=0.0029  Score=56.41  Aligned_cols=98  Identities=18%  Similarity=0.213  Sum_probs=67.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      ..+.+++|+|+|++|.+++..++..| .+++++.|+.++.+++.++++....+.. +.+ ..+....+|+|++++.....
T Consensus       121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~-~~~~~~~~DivInaTp~g~~  198 (278)
T PRK00258        121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLE-LQEELADFDLIINATSAGMS  198 (278)
T ss_pred             CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-ccc-chhccccCCEEEECCcCCCC
Confidence            46788999999999999999999999 5899999999888888777653210111 001 11233579999999864321


Q ss_pred             -----HHHHHHhhccCCEEEEEcCCC
Q 021300          261 -----LMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       261 -----~~~~~~~l~~~G~~v~~G~~~  281 (314)
                           .......++++..++++-..+
T Consensus       199 ~~~~~~~~~~~~l~~~~~v~DivY~P  224 (278)
T PRK00258        199 GELPLPPLPLSLLRPGTIVYDMIYGP  224 (278)
T ss_pred             CCCCCCCCCHHHcCCCCEEEEeecCC
Confidence                 112345677788888885533

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.21  E-value=0.0099  Score=51.45  Aligned_cols=75  Identities=21%  Similarity=0.305  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~~-------~~~~  248 (314)
                      ++.+++|.|+ |.+|...+..+...|++++++.+++++..++.+++   +.+.   ..|-.+++.+.++       .+++
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999997 99999999999989999999988877665554433   3222   2244555433332       2479


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|.++|.
T Consensus        86 d~vi~~ag~   94 (250)
T PRK12939         86 DGLVNNAGI   94 (250)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.19  E-value=0.0062  Score=58.04  Aligned_cols=76  Identities=17%  Similarity=0.253  Sum_probs=53.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC--hhhHHHHHHHcCCcEE-ecCCCHHHHHHH-------cCCccE
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS--PSKKSEAIERLGADSF-LVSRDQDEMQAA-------MGTMDG  250 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~--~~~~~~~~~~~ga~~~-v~~~~~~~~~~~-------~~~~d~  250 (314)
                      .+|.++||.|+ |++|...++.+...|++++++.+.  .+...++.++++...+ .|-.+++.+.++       .+++|+
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            35789999997 999999999999999999988774  3344555556665432 355555433322       236899


Q ss_pred             EEEccCC
Q 021300          251 IIDTVSA  257 (314)
Q Consensus       251 v~d~~g~  257 (314)
                      +|++.|.
T Consensus       288 vi~~AG~  294 (450)
T PRK08261        288 VVHNAGI  294 (450)
T ss_pred             EEECCCc
Confidence            9999983

>PRK06484 short chain dehydrogenase; Validated

Probab=97.18  E-value=0.0075  Score=58.55  Aligned_cols=101  Identities=18%  Similarity=0.271  Sum_probs=72.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE---EecCCCHHHHHHH-------cCCccE
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG  250 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~---~v~~~~~~~~~~~-------~~~~d~  250 (314)
                      ..|.++||.|+ +++|...++.+...|++|+++.+++++.+++.++++.+.   ..|-.+++.+.++       .+.+|+
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  346 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV  346 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46788999987 999999999999999999999999888877777776432   2344554433322       246999


Q ss_pred             EEEccCCcc--------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300          251 IIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       251 v~d~~g~~~--------------------------~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      +|.++|...                          ..+.++..|+.+|+++.+++..+
T Consensus       347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~  404 (520)
T PRK06484        347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS  404 (520)
T ss_pred             EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence            999987420                          12334455666799999987543

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.18  E-value=0.0081  Score=49.55  Aligned_cols=100  Identities=20%  Similarity=0.245  Sum_probs=70.4

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHH---HHHHcCCcE--EecCCCHHHHHHHcCCccEEEEc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSE---AIERLGADS--FLVSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~---~~~~~ga~~--~v~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      +++|+.++=+|+|. |..++++++.. ..+++++++++++.+.   -+++||.+.  ++.-..|+.+..+. .+|.+|--
T Consensus        32 ~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~-~~daiFIG  109 (187)
T COG2242          32 PRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP-SPDAIFIG  109 (187)
T ss_pred             CCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC-CCCEEEEC
Confidence            79999888788854 66777888544 4599999998876533   356788763  34444456555433 79999964


Q ss_pred             cCC--cccHHHHHHhhccCCEEEEEcCCCC
Q 021300          255 VSA--VHPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       255 ~g~--~~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      -|.  ...++.++..|+++|++|.-..+-+
T Consensus       110 Gg~~i~~ile~~~~~l~~ggrlV~naitlE  139 (187)
T COG2242         110 GGGNIEEILEAAWERLKPGGRLVANAITLE  139 (187)
T ss_pred             CCCCHHHHHHHHHHHcCcCCeEEEEeecHH
Confidence            442  2357889999999999999887633

>PRK06180 short chain dehydrogenase; Provisional

Probab=97.13  E-value=0.011  Score=52.30  Aligned_cols=74  Identities=19%  Similarity=0.244  Sum_probs=53.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE---EecCCCHHHHHHH-------cCCccEEE
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGII  252 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~---~v~~~~~~~~~~~-------~~~~d~v~  252 (314)
                      +.++||.|+ |.+|...++.+...|++|+++++++++...+.+..+...   ..|-.+++.+.+.       .+.+|+++
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv   83 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV   83 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            567999997 999999999998899999999999887766655444222   2244454433322       23689999


Q ss_pred             EccCC
Q 021300          253 DTVSA  257 (314)
Q Consensus       253 d~~g~  257 (314)
                      .+.|.
T Consensus        84 ~~ag~   88 (277)
T PRK06180         84 NNAGY   88 (277)
T ss_pred             ECCCc
Confidence            99885

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.13  E-value=0.0041  Score=55.73  Aligned_cols=99  Identities=12%  Similarity=0.173  Sum_probs=63.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCh---hhHHHHHHHcCC---c---EEecCCCHHHHHHHcCCccEE
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSP---SKKSEAIERLGA---D---SFLVSRDQDEMQAAMGTMDGI  251 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~---~~~~~~~~~~ga---~---~~v~~~~~~~~~~~~~~~d~v  251 (314)
                      ..+.+++|+|+|++|.+++..+...|++ ++++.|+.   ++.+++.+++..   .   ...+..+.+.+.+....+|++
T Consensus       124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil  203 (289)
T PRK12548        124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL  203 (289)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence            4578899999999999999888889985 88888886   556666555531   1   112333333444444578999


Q ss_pred             EEccCCcc-----cHHH-HHHhhccCCEEEEEcCC
Q 021300          252 IDTVSAVH-----PLMP-LIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       252 ~d~~g~~~-----~~~~-~~~~l~~~G~~v~~G~~  280 (314)
                      ++++.-..     .... ....+.++..++++-..
T Consensus       204 INaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~  238 (289)
T PRK12548        204 VNATLVGMKPNDGETNIKDTSVFRKDLVVADTVYN  238 (289)
T ss_pred             EEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecCC
Confidence            99885221     0111 23457777777777553

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.13  E-value=0.0065  Score=53.49  Aligned_cols=75  Identities=28%  Similarity=0.355  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHH-------cCC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~~-------~~~  247 (314)
                      .++.++||.|+ |.+|...++.+...|++|+++.+++++..+..+++   +.+.   ..|-.+++.+.+.       .++
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~   86 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP   86 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999987 99999999999999999999998877655443333   3221   1344444433322       236


Q ss_pred             ccEEEEccC
Q 021300          248 MDGIIDTVS  256 (314)
Q Consensus       248 ~d~v~d~~g  256 (314)
                      +|++|.+.|
T Consensus        87 iD~vi~~ag   95 (264)
T PRK07576         87 IDVLVSGAA   95 (264)
T ss_pred             CCEEEECCC
Confidence            899998876

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.12  E-value=0.01  Score=52.11  Aligned_cols=75  Identities=19%  Similarity=0.273  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE-E--ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS-F--LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~-~--v~~~~~~~~~~~-------~~~~  248 (314)
                      ++.++||.|+ |.+|...++.+...|++|+++.+++++.+++.+.+   +... +  .|..+++.+.+.       .+++
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   88 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL   88 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5788999997 99999999999999999999999887665554443   3221 1  344555443322       2479


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|+++|.
T Consensus        89 d~vi~~Ag~   97 (263)
T PRK07814         89 DIVVNNVGG   97 (263)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK07326 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.0094  Score=51.22  Aligned_cols=75  Identities=23%  Similarity=0.303  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC----cEE-ecCCCHHHHHH----H---cCCcc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA----DSF-LVSRDQDEMQA----A---MGTMD  249 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga----~~~-v~~~~~~~~~~----~---~~~~d  249 (314)
                      .+.+++|.|+ |.+|...++.+...|++|+++.+++++..++.+++..    ..+ .|-.+.+.+..    +   .+++|
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD   84 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4678999997 9999999999888899999999988777666665532    111 24444433322    2   23799


Q ss_pred             EEEEccCC
Q 021300          250 GIIDTVSA  257 (314)
Q Consensus       250 ~v~d~~g~  257 (314)
                      ++|.+.|.
T Consensus        85 ~vi~~ag~   92 (237)
T PRK07326         85 VLIANAGV   92 (237)
T ss_pred             EEEECCCC
Confidence            99998864

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.11  E-value=0.012  Score=52.02  Aligned_cols=100  Identities=15%  Similarity=0.191  Sum_probs=64.5

Q ss_pred             CCCEEEEEcCC---hHHHHHHHHHHHCCCeEEEEeCChh---hHHHHHHHcCCcEE--ecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGADSF--LVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Gag---~vG~~a~~~a~~~g~~vi~v~~~~~---~~~~~~~~~ga~~~--v~~~~~~~~~~~-------~~~  247 (314)
                      .|.++||.|++   ++|.+.++.+...|++|+++.++.+   +.+++.+++|....  .|-.+++.+.++       .+.
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK   85 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            46789999984   8999999999999999998877643   23344444554322  244454333222       247


Q ss_pred             ccEEEEccCCcc-----------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300          248 MDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       248 ~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      +|++++++|...                             ....++..|+.+|+++.+++..+
T Consensus        86 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~  149 (271)
T PRK06505         86 LDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGS  149 (271)
T ss_pred             CCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCc
Confidence            999999987321                             01223455666799998876543

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.10  E-value=0.0023  Score=57.12  Aligned_cols=76  Identities=25%  Similarity=0.267  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcE-EecCCCHHHHHHHcCCccEEEEccCCc
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~-~v~~~~~~~~~~~~~~~d~v~d~~g~~  258 (314)
                      .+.+++|+|+|+.+.+++..+...|+ +++++.|+.++.++++++++... +......+.+......+|+||+|++..
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g  201 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPAD  201 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCC
Confidence            57899999999999999999999997 79899999998888888775321 111111122223335799999998754

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.09  E-value=0.003  Score=56.14  Aligned_cols=116  Identities=20%  Similarity=0.221  Sum_probs=74.1

Q ss_pred             hhhhHhcC--CCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcE----EecCCCHHHHHHH
Q 021300          172 YSPLRFYG--LDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADS----FLVSRDQDEMQAA  244 (314)
Q Consensus       172 ~~~l~~~~--~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~----~v~~~~~~~~~~~  244 (314)
                      +.+|....  ...+|++++|+|+|+.+.+++..++..|+ +++++.|+.++.+++++.++...    .....+.+.   .
T Consensus       112 ~~~L~~~~~~~~~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~---~  188 (283)
T COG0169         112 LRALKEFGLPVDVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEG---L  188 (283)
T ss_pred             HHHHHhcCCCcccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccc---c
Confidence            44555433  23568999999999999999999999996 89999999999999988887422    111111111   0


Q ss_pred             cCCccEEEEccCCcccHH-----HHHHhhccCCEEEEEcCCCCCcccchhhhhc
Q 021300          245 MGTMDGIIDTVSAVHPLM-----PLIGLLKSQGKLVLVGAPEKPLELPAFSLLM  293 (314)
Q Consensus       245 ~~~~d~v~d~~g~~~~~~-----~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~  293 (314)
                      . .+|+++++++......     .....+++.-.+.++=..  |...++.....
T Consensus       189 ~-~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~--P~~TplL~~A~  239 (283)
T COG0169         189 E-EADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYN--PLETPLLREAR  239 (283)
T ss_pred             c-ccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccC--CCCCHHHHHHH
Confidence            1 5999999986321110     014566666666666443  23445544443

>PRK06196 oxidoreductase; Provisional

Probab=97.09  E-value=0.012  Score=53.23  Aligned_cols=75  Identities=23%  Similarity=0.295  Sum_probs=53.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-CcE-EecCCCHHHHHHH-------cCCccEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADS-FLVSRDQDEMQAA-------MGTMDGII  252 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-a~~-~v~~~~~~~~~~~-------~~~~d~v~  252 (314)
                      .|.++||.|+ |++|..++..+...|++|+++.+++++.+++.+++. ... ..|-.+.+.+.++       .+++|++|
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li  104 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI  104 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            4678999998 999999999988899999999999877666655443 221 1244454433322       24699999


Q ss_pred             EccCC
Q 021300          253 DTVSA  257 (314)
Q Consensus       253 d~~g~  257 (314)
                      .++|.
T Consensus       105 ~nAg~  109 (315)
T PRK06196        105 NNAGV  109 (315)
T ss_pred             ECCCC
Confidence            99873

>PRK07060 short chain dehydrogenase; Provisional

Probab=97.07  E-value=0.0053  Score=53.07  Aligned_cols=75  Identities=21%  Similarity=0.397  Sum_probs=57.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHHc---CCccEEEEccCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAM---GTMDGIIDTVSA  257 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~~---~~~d~v~d~~g~  257 (314)
                      .+.+++|.|+ |.+|...++.+...|++|+++.++.++.+++.++.+...+ .|..+.+.+.+..   +++|++|++.|.
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~   87 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGI   87 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence            5678999998 9999999999999999999999998877777666665433 3555554444332   468999999874

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.07  E-value=0.0074  Score=54.79  Aligned_cols=97  Identities=24%  Similarity=0.228  Sum_probs=66.8

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHH---HHHcCCcEEe-cCCCHHHHHHHcCCccEEEE
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEA---IERLGADSFL-VSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~---~~~~ga~~~v-~~~~~~~~~~~~~~~d~v~d  253 (314)
                      .++++++||.+|+|. |..++.+++..+.  .|+.++.+++..+.+   .++.|.+.+. ...+........+.||+|+.
T Consensus        77 ~i~~g~~VLDIG~Gt-G~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~~~~~fD~Ii~  155 (322)
T PRK13943         77 GLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVPEFAPYDVIFV  155 (322)
T ss_pred             CCCCCCEEEEEeCCc-cHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCChhhcccccCCccEEEE
Confidence            368999999999974 9999999998763  688888888754333   2345654332 22221111111246999999


Q ss_pred             ccCCcccHHHHHHhhccCCEEEEE
Q 021300          254 TVSAVHPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       254 ~~g~~~~~~~~~~~l~~~G~~v~~  277 (314)
                      +.+.........+.|+++|+++..
T Consensus       156 ~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        156 TVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             CCchHHhHHHHHHhcCCCCEEEEE
Confidence            888665566788999999998774

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=97.07  E-value=0.0017  Score=62.21  Aligned_cols=78  Identities=22%  Similarity=0.389  Sum_probs=56.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh--------------------hHHHHHHHcCCcEEecCCC-HH-
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--------------------KKSEAIERLGADSFLVSRD-QD-  239 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~--------------------~~~~~~~~~ga~~~v~~~~-~~-  239 (314)
                      +.+++|+|+|+|+.|+.++..++..|.+|+++...+.                    +..+..+++|.+..++... .+ 
T Consensus       139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  218 (467)
T TIGR01318       139 PTGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDI  218 (467)
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCcc
Confidence            4688999999999999999999999999988876541                    2334557788876554321 11 


Q ss_pred             HHHHHcCCccEEEEccCCcc
Q 021300          240 EMQAAMGTMDGIIDTVSAVH  259 (314)
Q Consensus       240 ~~~~~~~~~d~v~d~~g~~~  259 (314)
                      .+......+|.||.++|...
T Consensus       219 ~~~~~~~~~D~vilAtGa~~  238 (467)
T TIGR01318       219 SLDDLLEDYDAVFLGVGTYR  238 (467)
T ss_pred             CHHHHHhcCCEEEEEeCCCC
Confidence            22233357999999999653

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.05  E-value=0.014  Score=49.33  Aligned_cols=91  Identities=22%  Similarity=0.153  Sum_probs=62.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~  261 (314)
                      -.|.+++|+|.|.+|..+++.+...|++|+++++++++.+++.+.+++.. ++..+     .....+|+++-|.......
T Consensus        26 l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~-v~~~~-----l~~~~~Dv~vp~A~~~~I~   99 (200)
T cd01075          26 LEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATV-VAPEE-----IYSVDADVFAPCALGGVIN   99 (200)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE-Ecchh-----hccccCCEEEecccccccC
Confidence            46789999999999999999999999999999988888888877777643 33211     1122688888665433234


Q ss_pred             HHHHHhhccCCEEEEEcCC
Q 021300          262 MPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       262 ~~~~~~l~~~G~~v~~G~~  280 (314)
                      ...++.|+  .+++.-|..
T Consensus       100 ~~~~~~l~--~~~v~~~AN  116 (200)
T cd01075         100 DDTIPQLK--AKAIAGAAN  116 (200)
T ss_pred             HHHHHHcC--CCEEEECCc
Confidence            44445553  455544443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK06484 short chain dehydrogenase; Validated

Probab=97.02  E-value=0.013  Score=56.95  Aligned_cols=76  Identities=22%  Similarity=0.382  Sum_probs=57.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE---EecCCCHHHHHHH-------cCCccE
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG  250 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~---~v~~~~~~~~~~~-------~~~~d~  250 (314)
                      ..|.++||.|+ +++|.+.++.+...|++|+++.++.++..++.++++.+.   ..|-.+++.+.++       .+.+|+
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            35788999987 999999999999999999999999888878877776532   2344555433322       246999


Q ss_pred             EEEccCC
Q 021300          251 IIDTVSA  257 (314)
Q Consensus       251 v~d~~g~  257 (314)
                      +|++.|.
T Consensus        83 li~nag~   89 (520)
T PRK06484         83 LVNNAGV   89 (520)
T ss_pred             EEECCCc
Confidence            9999874

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.02  E-value=0.0064  Score=53.92  Aligned_cols=103  Identities=20%  Similarity=0.116  Sum_probs=68.6

Q ss_pred             hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC---cEEecCCCHHHHHHHcCCccE
Q 021300          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA---DSFLVSRDQDEMQAAMGTMDG  250 (314)
Q Consensus       174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga---~~~v~~~~~~~~~~~~~~~d~  250 (314)
                      ++........+.+++|+|+|++|.+++..+...|++++++.++.++.+++.+++..   ...+.   .+.  .....+|+
T Consensus       107 ~l~~~~~~~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~---~~~--~~~~~~Di  181 (270)
T TIGR00507       107 DLERLIPLRPNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFS---MDE--LPLHRVDL  181 (270)
T ss_pred             HHHhcCCCccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEec---hhh--hcccCccE
Confidence            34432323567899999999999999998888899999999998887777776542   12211   111  12246999


Q ss_pred             EEEccCCcc--cH---HHHHHhhccCCEEEEEcCCC
Q 021300          251 IIDTVSAVH--PL---MPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       251 v~d~~g~~~--~~---~~~~~~l~~~G~~v~~G~~~  281 (314)
                      +|++++...  ..   ......++++..++++...+
T Consensus       182 vInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p  217 (270)
T TIGR00507       182 IINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNP  217 (270)
T ss_pred             EEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCC
Confidence            999997531  01   11245577788888885543

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=97.01  E-value=0.0029  Score=51.89  Aligned_cols=97  Identities=23%  Similarity=0.290  Sum_probs=66.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecC-------------------C-CHHHHH
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS-------------------R-DQDEMQ  242 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~-------------------~-~~~~~~  242 (314)
                      +.-+++|+|+|.+|..|+.+++.+|+++++.+..+++.+++ +..++..+...                   . ....+.
T Consensus        19 ~p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~   97 (168)
T PF01262_consen   19 PPAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQL-ESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA   97 (168)
T ss_dssp             -T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHH-HHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred             CCeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhh-hcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence            34778999999999999999999999999999998877655 55665444331                   0 012333


Q ss_pred             HHcCCccEEEEcc---CC---cccHHHHHHhhccCCEEEEEcCC
Q 021300          243 AAMGTMDGIIDTV---SA---VHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       243 ~~~~~~d~v~d~~---g~---~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      +....+|+++-+.   +.   .-.....++.|+++..++++..-
T Consensus        98 ~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D  141 (168)
T PF01262_consen   98 EFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCD  141 (168)
T ss_dssp             HHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGG
T ss_pred             HHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEec
Confidence            3344689988643   11   12357788999999999999764

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.01  E-value=0.0066  Score=58.54  Aligned_cols=73  Identities=18%  Similarity=0.210  Sum_probs=54.7

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~  258 (314)
                      +.+|++++|+|.|..|++++++++..|++|++.+..+.+... ++++|+..+...+.++.    ...+|+|+.+.|.+
T Consensus         9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~-l~~~g~~~~~~~~~~~~----l~~~D~VV~SpGi~   81 (488)
T PRK03369          9 LLPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRP-HAERGVATVSTSDAVQQ----IADYALVVTSPGFR   81 (488)
T ss_pred             ccCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHhCCCEEEcCcchHhH----hhcCCEEEECCCCC
Confidence            567899999999999999999999999999998877665544 45678754322222222    24589999999865

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.00  E-value=0.011  Score=51.08  Aligned_cols=75  Identities=19%  Similarity=0.283  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC--CcE---EecCCCHHHHHHH-------cCCcc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG--ADS---FLVSRDQDEMQAA-------MGTMD  249 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g--a~~---~v~~~~~~~~~~~-------~~~~d  249 (314)
                      .+.++||.|+ |.+|...++.+...|++|+++.+++++..++.+.+.  .+.   ..|-.+++.+..+       .+.+|
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   83 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD   83 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4578999998 999999999998899999999999877666655443  211   1234444433322       23689


Q ss_pred             EEEEccCC
Q 021300          250 GIIDTVSA  257 (314)
Q Consensus       250 ~v~d~~g~  257 (314)
                      ++|.+.|.
T Consensus        84 ~vi~~ag~   91 (251)
T PRK07231         84 ILVNNAGT   91 (251)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.00  E-value=0.019  Score=49.94  Aligned_cols=75  Identities=21%  Similarity=0.313  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc---EEecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~---~~v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.++||.|+ |.+|...++.+...|++++++.+++++.+++.+++   +..   ...|-.+++.+.++       .+++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4578999997 99999999998889999999999987765554443   322   12244454433322       2469


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|.++|.
T Consensus        83 d~vi~~a~~   91 (258)
T PRK12429         83 DILVNNAGI   91 (258)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=96.99  E-value=0.021  Score=49.63  Aligned_cols=72  Identities=19%  Similarity=0.308  Sum_probs=52.0

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHH----H---cCCccEEEEc
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQA----A---MGTMDGIIDT  254 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~----~---~~~~d~v~d~  254 (314)
                      +++|.|+ |.+|...+..+...|++|+++++++++..++.+.++.+..   .|-.+.+.+.+    +   .+++|.++.+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~   81 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN   81 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            6889987 9999999999999999999999998877666655554322   23344433322    1   2479999998


Q ss_pred             cCC
Q 021300          255 VSA  257 (314)
Q Consensus       255 ~g~  257 (314)
                      +|.
T Consensus        82 ag~   84 (248)
T PRK10538         82 AGL   84 (248)
T ss_pred             CCc
Confidence            874

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.99  E-value=0.0071  Score=56.48  Aligned_cols=90  Identities=19%  Similarity=0.249  Sum_probs=62.8

Q ss_pred             EEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHc-C--C-cEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERL-G--A-DSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~-g--a-~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      |+|+|+|.+|..+++.+....-  ++++.+++.++.+++.+++ +  . ...+|-.+.+.+.++..+.|+|++|+|....
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~~   80 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFFG   80 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGGH
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccchh
Confidence            6889999999999999997764  8999999999887887652 2  2 2345667777788888899999999987644


Q ss_pred             HHHHHHhhccCCEEEE
Q 021300          261 LMPLIGLLKSQGKLVL  276 (314)
Q Consensus       261 ~~~~~~~l~~~G~~v~  276 (314)
                      ..-+-.+++.+-.+++
T Consensus        81 ~~v~~~~i~~g~~yvD   96 (386)
T PF03435_consen   81 EPVARACIEAGVHYVD   96 (386)
T ss_dssp             HHHHHHHHHHT-EEEE
T ss_pred             HHHHHHHHHhCCCeec
Confidence            4445555566666776

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK07832 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.02  Score=50.57  Aligned_cols=72  Identities=21%  Similarity=0.304  Sum_probs=50.4

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcE----EecCCCHHHHHHH-------cCCccE
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS----FLVSRDQDEMQAA-------MGTMDG  250 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~----~v~~~~~~~~~~~-------~~~~d~  250 (314)
                      +++|.|+ |++|..+++.+...|++|+++.++++..+++.++   .+...    ..|-.+++.+.+.       .+++|+
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV   81 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6889987 9999999999998999999998887765555433   23321    2355555433222       246899


Q ss_pred             EEEccCC
Q 021300          251 IIDTVSA  257 (314)
Q Consensus       251 v~d~~g~  257 (314)
                      +|.+.|.
T Consensus        82 lv~~ag~   88 (272)
T PRK07832         82 VMNIAGI   88 (272)
T ss_pred             EEECCCC
Confidence            9999974

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.009  Score=51.78  Aligned_cols=98  Identities=19%  Similarity=0.299  Sum_probs=62.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHH---cCCcE---EecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIER---LGADS---FLVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~~~~---~ga~~---~v~~~~~~~~~~~-------~~~  247 (314)
                      ++.++||.|+ |.+|...+..+...|++|+++.++.. +.+.+.++   .+.+.   ..|-.+++.+...       .++
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            4678999997 99999999998889999998888653 33333222   23321   1244555433322       136


Q ss_pred             ccEEEEccCCc-------------------ccHHHHHHhhccCCEEEEEcCC
Q 021300          248 MDGIIDTVSAV-------------------HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       248 ~d~v~d~~g~~-------------------~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      +|+++.+.|..                   ..+..+.+.+..+|+++.+++.
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~  136 (248)
T PRK07806         85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH  136 (248)
T ss_pred             CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence            89999888642                   1234455555567899988763

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.98  E-value=0.017  Score=51.21  Aligned_cols=100  Identities=16%  Similarity=0.215  Sum_probs=66.6

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCh---hhHHHHHHHcCCcEE--ecCCCHHHHHH----H---cCC
Q 021300          183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERLGADSF--LVSRDQDEMQA----A---MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga---g~vG~~a~~~a~~~g~~vi~v~~~~---~~~~~~~~~~ga~~~--v~~~~~~~~~~----~---~~~  247 (314)
                      .|.++||.|+   +++|.++++.+...|++|+++.++.   ++.+++.++++....  .|-.+++.+.+    +   .+.
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~   83 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK   83 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4678999986   4899999999988999999888874   234445455554322  34455433222    2   247


Q ss_pred             ccEEEEccCCcc-----------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300          248 MDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       248 ~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      +|++++++|...                             ....+++.|+++|+++.+++..+
T Consensus        84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~  147 (274)
T PRK08415         84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGG  147 (274)
T ss_pred             CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCC
Confidence            999999988410                             12345566777899999876543

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.96  E-value=0.0094  Score=56.06  Aligned_cols=96  Identities=14%  Similarity=0.225  Sum_probs=67.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      -.+.+++|+|+|.+|.+++..+...|+ +++++.|+.++.+.+.++++...++.   .+...+....+|+||.|++.++.
T Consensus       179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~---~~~l~~~l~~aDiVI~aT~a~~~  255 (414)
T PRK13940        179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY---LSELPQLIKKADIIIAAVNVLEY  255 (414)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec---HHHHHHHhccCCEEEECcCCCCe
Confidence            567899999999999999999999996 78888899888888888886222222   23334555679999999997653


Q ss_pred             HHHHHHhhccC-CEEEEEcCCC
Q 021300          261 LMPLIGLLKSQ-GKLVLVGAPE  281 (314)
Q Consensus       261 ~~~~~~~l~~~-G~~v~~G~~~  281 (314)
                      +-. .+.++.. =.+++++.|.
T Consensus       256 vi~-~~~~~~~~~~~iDLavPR  276 (414)
T PRK13940        256 IVT-CKYVGDKPRVFIDISIPQ  276 (414)
T ss_pred             eEC-HHHhCCCCeEEEEeCCCC
Confidence            211 1112211 1367787763

>PRK07062 short chain dehydrogenase; Provisional

Probab=96.96  E-value=0.018  Score=50.57  Aligned_cols=75  Identities=20%  Similarity=0.283  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CC-cE---EecCCCHHHHHH----H---cC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GA-DS---FLVSRDQDEMQA----A---MG  246 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----ga-~~---~v~~~~~~~~~~----~---~~  246 (314)
                      .|.++||.|+ +++|...++.+...|++|+++.+++++.+++.+++    +. +.   ..|-.+++.+.+    +   .+
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4678999987 99999999999999999999999887655544332    21 21   124455443322    2   24


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      .+|++++++|.
T Consensus        87 ~id~li~~Ag~   97 (265)
T PRK07062         87 GVDMLVNNAGQ   97 (265)
T ss_pred             CCCEEEECCCC
Confidence            69999999984

>PRK07063 short chain dehydrogenase; Provisional

Probab=96.96  E-value=0.012  Score=51.44  Aligned_cols=75  Identities=20%  Similarity=0.273  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-----CCcE---EecCCCHHHHHHH-------cC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GADS---FLVSRDQDEMQAA-------MG  246 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~-----ga~~---~v~~~~~~~~~~~-------~~  246 (314)
                      .+.++||.|+ |++|...++.+...|++|+++.+++++.+++.+++     +.+.   ..|-.+++.+...       .+
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   85 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG   85 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4678999987 99999999999999999999999887766665543     2221   1244444333222       24


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      .+|++|.+.|.
T Consensus        86 ~id~li~~ag~   96 (260)
T PRK07063         86 PLDVLVNNAGI   96 (260)
T ss_pred             CCcEEEECCCc
Confidence            79999999883

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=96.96  E-value=0.00022  Score=55.41  Aligned_cols=50  Identities=40%  Similarity=0.502  Sum_probs=36.4

Q ss_pred             cCCcEEecCCCHHHHHHHcCCccEEEEccC--CcccHHHHHHhhccCCEEEEEcC
Q 021300          227 LGADSFLVSRDQDEMQAAMGTMDGIIDTVS--AVHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       227 ~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g--~~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      |||+.++|+++.++  ...+++|+|||++|  ....+..++++| ++|+++.++.
T Consensus         1 LGAd~vidy~~~~~--~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~   52 (127)
T PF13602_consen    1 LGADEVIDYRDTDF--AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG   52 (127)
T ss_dssp             CT-SEEEETTCSHH--HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S
T ss_pred             CCcCEEecCCCccc--cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC
Confidence            68999999997776  33468999999999  554446667777 9999999984

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.96  E-value=0.0091  Score=53.28  Aligned_cols=74  Identities=19%  Similarity=0.328  Sum_probs=52.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcC----CcEEecCCCHHHHHHHcCCccEEEEccC
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLG----ADSFLVSRDQDEMQAAMGTMDGIIDTVS  256 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~g----a~~~v~~~~~~~~~~~~~~~d~v~d~~g  256 (314)
                      ..+.+++|+|+|+.+.+++..+...|+ +++++.|+.++.+++++++.    ...+. ..+..........+|+|++++.
T Consensus       125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~-~~~~~~~~~~~~~~divINaTp  203 (283)
T PRK14027        125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV-GVDARGIEDVIAAADGVVNATP  203 (283)
T ss_pred             cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE-ecCHhHHHHHHhhcCEEEEcCC
Confidence            457899999999999999998888897 78889999888888877653    21121 1121112223346999999985

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.95  E-value=0.02  Score=50.58  Aligned_cols=74  Identities=19%  Similarity=0.258  Sum_probs=52.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHH-------cCCccEEE
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGII  252 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~-------~~~~d~v~  252 (314)
                      +.++||.|+ |.+|...++.+...|++|+++.+++++..++.+.++....   .|-.+++.+...       .+.+|.+|
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            457899987 9999999998888899999999998877666655543221   233444332221       24789999


Q ss_pred             EccCC
Q 021300          253 DTVSA  257 (314)
Q Consensus       253 d~~g~  257 (314)
                      .++|.
T Consensus        83 ~~ag~   87 (275)
T PRK08263         83 NNAGY   87 (275)
T ss_pred             ECCCC
Confidence            99884

>PRK08267 short chain dehydrogenase; Provisional

Probab=96.95  E-value=0.019  Score=50.19  Aligned_cols=73  Identities=18%  Similarity=0.261  Sum_probs=53.0

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-Cc---EEecCCCHHHHHH----H----cCCccEE
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-AD---SFLVSRDQDEMQA----A----MGTMDGI  251 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-a~---~~v~~~~~~~~~~----~----~~~~d~v  251 (314)
                      .++||.|+ |.+|...++.+...|++|+++.++.+..+++.+.++ ..   ...|-.+.+.+.+    .    .+++|++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            46899987 999999999888899999999999887777766554 21   1234455443332    2    3468999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      +.++|.
T Consensus        82 i~~ag~   87 (260)
T PRK08267         82 FNNAGI   87 (260)
T ss_pred             EECCCC
Confidence            999884

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.95  E-value=0.0083  Score=52.36  Aligned_cols=75  Identities=21%  Similarity=0.283  Sum_probs=55.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHH-------cCCccEEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAA-------MGTMDGIID  253 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~-------~~~~d~v~d  253 (314)
                      .|.++||.|+ |.+|...++.+...|+++++++++..+.+.+.++++...+ .|-.+++.+.+.       .+.+|+++.
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   85 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN   85 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5789999998 9999999999999999999999988776666666654322 355555433322       246899999


Q ss_pred             ccCC
Q 021300          254 TVSA  257 (314)
Q Consensus       254 ~~g~  257 (314)
                      ++|.
T Consensus        86 ~ag~   89 (255)
T PRK06057         86 NAGI   89 (255)
T ss_pred             CCCc
Confidence            9874

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=96.94  E-value=0.016  Score=50.60  Aligned_cols=75  Identities=25%  Similarity=0.394  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.++||.|+ |.+|...++.+...|++|+++.+++++.+++.+++   |....   .|-.+++.+.++       .+.+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999997 99999999999889999999999877665554443   32211   244444433332       2468


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|.+.|.
T Consensus        89 d~li~~ag~   97 (255)
T PRK07523         89 DILVNNAGM   97 (255)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.93  E-value=0.012  Score=50.33  Aligned_cols=75  Identities=21%  Similarity=0.381  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE-ecCCCHHHHHH-------HcCCccE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF-LVSRDQDEMQA-------AMGTMDG  250 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~-v~~~~~~~~~~-------~~~~~d~  250 (314)
                      ++.++||.|+ |.+|..+++.+...|++|+++++++++..+..+++   +...+ .|-.+.+.+.+       ..+++|+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            4689999998 99999999999888999999999776544433332   33221 23344332222       2247999


Q ss_pred             EEEccCC
Q 021300          251 IIDTVSA  257 (314)
Q Consensus       251 v~d~~g~  257 (314)
                      ++.+.|.
T Consensus        86 vi~~ag~   92 (239)
T PRK12828         86 LVNIAGA   92 (239)
T ss_pred             EEECCcc
Confidence            9998874

>PRK09291 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.014  Score=50.75  Aligned_cols=73  Identities=15%  Similarity=0.116  Sum_probs=52.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCc---EEecCCCHHHHHHHc-CCccEEEEcc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGAD---SFLVSRDQDEMQAAM-GTMDGIIDTV  255 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~ga~---~~v~~~~~~~~~~~~-~~~d~v~d~~  255 (314)
                      +.++||.|+ |.+|..+++.+...|++++++++++++..++.+   ..+.+   ...|-.+++.+.... .++|++|.+.
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a   81 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA   81 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence            357999997 999999999999999999999998765544432   22322   123555555555443 4899999998


Q ss_pred             C
Q 021300          256 S  256 (314)
Q Consensus       256 g  256 (314)
                      |
T Consensus        82 g   82 (257)
T PRK09291         82 G   82 (257)
T ss_pred             C
Confidence            7

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.92  E-value=0.0086  Score=51.08  Aligned_cols=97  Identities=30%  Similarity=0.306  Sum_probs=64.2

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHH---HcCCcE-EecCCCHHHHHHHcCCccEEEE
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIE---RLGADS-FLVSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~---~~ga~~-~v~~~~~~~~~~~~~~~d~v~d  253 (314)
                      .+++|++||-+|+|. |..+..+++..+  .+++.++.+++..+.+.+   +.|.+. -+...+........+.||.|+-
T Consensus        73 ~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~~~~~~fD~I~~  151 (212)
T PRK13942         73 DLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGYEENAPYDRIYV  151 (212)
T ss_pred             CCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCcCCCcCEEEE
Confidence            478999999999865 777778887765  589999998876544433   334321 1111221110011246999887


Q ss_pred             ccCCcccHHHHHHhhccCCEEEEE
Q 021300          254 TVSAVHPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       254 ~~g~~~~~~~~~~~l~~~G~~v~~  277 (314)
                      ............+.|+++|+++..
T Consensus       152 ~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        152 TAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             CCCcccchHHHHHhhCCCcEEEEE
Confidence            655555678899999999998875

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.90  E-value=0.0048  Score=55.14  Aligned_cols=96  Identities=19%  Similarity=0.253  Sum_probs=64.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCC----cEEecCCCHHHHHHHcCCccEEEEccC
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA----DSFLVSRDQDEMQAAMGTMDGIIDTVS  256 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga----~~~v~~~~~~~~~~~~~~~d~v~d~~g  256 (314)
                      ..+.+++|+|+|++|.+++..+...|+ +++++.++.++.+.+++.++.    ..+....   .+.+....+|+||+|+.
T Consensus       125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~~~aDiVInaTp  201 (284)
T PRK12549        125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAALAAADGLVHATP  201 (284)
T ss_pred             ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhhCCCCEEEECCc
Confidence            456889999999999999999999998 788999998888888776642    1222211   12223356999999964


Q ss_pred             Cc--c--cHHHHHHhhccCCEEEEEcCC
Q 021300          257 AV--H--PLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       257 ~~--~--~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      ..  .  ........+++...++++-..
T Consensus       202 ~Gm~~~~~~~~~~~~l~~~~~v~DivY~  229 (284)
T PRK12549        202 TGMAKHPGLPLPAELLRPGLWVADIVYF  229 (284)
T ss_pred             CCCCCCCCCCCCHHHcCCCcEEEEeeeC
Confidence            21  0  011123456777667666543

>PRK09242 tropinone reductase; Provisional

Probab=96.88  E-value=0.027  Score=49.14  Aligned_cols=75  Identities=12%  Similarity=0.246  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-----CCcEE---ecCCCHHHHH-------HHcC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GADSF---LVSRDQDEMQ-------AAMG  246 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~-----ga~~~---v~~~~~~~~~-------~~~~  246 (314)
                      .|.++||.|+ |.+|...++.+...|++++++.++.++.+++.+++     +.+..   .|-.+++.+.       +..+
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4788999997 99999999999999999999999887766665443     22221   2444443322       2234


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      ++|+++.+.|.
T Consensus        88 ~id~li~~ag~   98 (257)
T PRK09242         88 GLHILVNNAGG   98 (257)
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.88  E-value=0.026  Score=49.21  Aligned_cols=75  Identities=16%  Similarity=0.308  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.++||.|+ |.+|...++.+...|++|+++.+++++..++.++   .+.+..   .|-.+.+.+.+.       .+.+
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999998 9999999999999999999999988665555443   343322   233444433222       2468


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |+++.+.|.
T Consensus        86 d~vi~~ag~   94 (262)
T PRK13394         86 DILVSNAGI   94 (262)
T ss_pred             CEEEECCcc
Confidence            999999874

>PRK09186 flagellin modification protein A; Provisional

Probab=96.88  E-value=0.015  Score=50.68  Aligned_cols=74  Identities=23%  Similarity=0.310  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCc---E-EecCCCHHHHHHHc-------C
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GAD---S-FLVSRDQDEMQAAM-------G  246 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----ga~---~-~v~~~~~~~~~~~~-------~  246 (314)
                      .+.++||.|+ |.+|...+..+...|++++++.+++++.+++.+++    +..   . ..|-.+++.+.++.       +
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4688999997 99999999999999999999998887766655444    222   1 22545554433322       3


Q ss_pred             CccEEEEccC
Q 021300          247 TMDGIIDTVS  256 (314)
Q Consensus       247 ~~d~v~d~~g  256 (314)
                      .+|+++.+.+
T Consensus        83 ~id~vi~~A~   92 (256)
T PRK09186         83 KIDGAVNCAY   92 (256)
T ss_pred             CccEEEECCc
Confidence            5899999985

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.87  E-value=0.0081  Score=52.50  Aligned_cols=77  Identities=19%  Similarity=0.312  Sum_probs=55.8

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc----EEecCCCHHHHHHH-------cCCcc
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD----SFLVSRDQDEMQAA-------MGTMD  249 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~----~~v~~~~~~~~~~~-------~~~~d  249 (314)
                      .++.++||.|+ |.+|...++.+...|++|+++.++++..+++.+.+...    ...|-.+++.+.+.       .+++|
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   88 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD   88 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            57789999998 99999999999999999999999877766665544322    22344555433322       24799


Q ss_pred             EEEEccCCc
Q 021300          250 GIIDTVSAV  258 (314)
Q Consensus       250 ~v~d~~g~~  258 (314)
                      +||.+.|..
T Consensus        89 ~vi~~ag~~   97 (264)
T PRK12829         89 VLVNNAGIA   97 (264)
T ss_pred             EEEECCCCC
Confidence            999998754

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.87  E-value=0.0086  Score=52.53  Aligned_cols=75  Identities=23%  Similarity=0.300  Sum_probs=54.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHH-------HcCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQA-------AMGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~-------~~~~~d~v  251 (314)
                      ++.++||.|+ +++|...++.+...|++|+++.+++++.+++.++++....   .|-.+++.+..       ..+.+|++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   84 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF   84 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4678999987 9999999999999999999999998887777666653211   23344432222       12469999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      |+++|.
T Consensus        85 i~~ag~   90 (263)
T PRK06200         85 VGNAGI   90 (263)
T ss_pred             EECCCC
Confidence            999873

>PLN00203 glutamyl-tRNA reductase

Probab=96.87  E-value=0.011  Score=57.20  Aligned_cols=98  Identities=24%  Similarity=0.354  Sum_probs=68.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc-
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-  260 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~-  260 (314)
                      .+.+|+|+|+|.+|.++++.+...|+ +++++.++.++.+.+.++++...+ .....+...+....+|+||.+++.... 
T Consensus       265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~~dl~~al~~aDVVIsAT~s~~pv  343 (519)
T PLN00203        265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPLDEMLACAAEADVVFTSTSSETPL  343 (519)
T ss_pred             CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecHhhHHHHHhcCCEEEEccCCCCCe
Confidence            37899999999999999999999997 799999999988888887752211 112223334455689999999876532 


Q ss_pred             -HHHHHHhhcc----CC---EEEEEcCCC
Q 021300          261 -LMPLIGLLKS----QG---KLVLVGAPE  281 (314)
Q Consensus       261 -~~~~~~~l~~----~G---~~v~~G~~~  281 (314)
                       ....++.+.+    .|   .+++++.|.
T Consensus       344 I~~e~l~~~~~~~~~~~~~~~~IDLAvPR  372 (519)
T PLN00203        344 FLKEHVEALPPASDTVGGKRLFVDISVPR  372 (519)
T ss_pred             eCHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence             3334444322    12   488888874

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.86  E-value=0.012  Score=52.55  Aligned_cols=98  Identities=15%  Similarity=0.161  Sum_probs=59.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCh---hhHHHHHHHcCCc-----EEecCCCHHHHHHHcCCccEEE
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP---SKKSEAIERLGAD-----SFLVSRDQDEMQAAMGTMDGII  252 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~---~~~~~~~~~~ga~-----~~v~~~~~~~~~~~~~~~d~v~  252 (314)
                      ..+.+++|+|+|+.+.+++..+...|+ +++++.|++   ++.+.++++++..     .+....+.+.+......+|+|+
T Consensus       122 ~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivI  201 (288)
T PRK12749        122 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILT  201 (288)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEE
Confidence            466799999999999887777777887 788888884   4667777766531     1212111112223345799999


Q ss_pred             EccCCcc------cHHHHHHhhccCCEEEEEcC
Q 021300          253 DTVSAVH------PLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       253 d~~g~~~------~~~~~~~~l~~~G~~v~~G~  279 (314)
                      +++....      ........++++..+.++-.
T Consensus       202 NaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY  234 (288)
T PRK12749        202 NGTKVGMKPLENESLVNDISLLHPGLLVTECVY  234 (288)
T ss_pred             ECCCCCCCCCCCCCCCCcHHHCCCCCEEEEecC
Confidence            9885321      01112344566666666644

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.86  E-value=0.013  Score=52.15  Aligned_cols=94  Identities=18%  Similarity=0.202  Sum_probs=65.4

Q ss_pred             chhhhhhhhhhHhcCCCCCCCEEEEEcCCh-HHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHH
Q 021300          165 LCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA  243 (314)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~-vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~  243 (314)
                      +++-......++....--.|.+++|+|+|. +|...+.++...|++|++.-+...   .+.                  +
T Consensus       140 p~T~~gii~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~---~L~------------------~  198 (283)
T PRK14192        140 SATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ---NLP------------------E  198 (283)
T ss_pred             CCcHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch---hHH------------------H
Confidence            444333344455555457899999999976 999999999999998777665321   221                  2


Q ss_pred             HcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          244 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       244 ~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      ....+|+++.++|.+..+  -.+.++++-.++.+|..+
T Consensus       199 ~~~~aDIvI~AtG~~~~v--~~~~lk~gavViDvg~n~  234 (283)
T PRK14192        199 LVKQADIIVGAVGKPELI--KKDWIKQGAVVVDAGFHP  234 (283)
T ss_pred             HhccCCEEEEccCCCCcC--CHHHcCCCCEEEEEEEee
Confidence            225689999999876532  245689999999998754

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.85  E-value=0.022  Score=43.53  Aligned_cols=97  Identities=19%  Similarity=0.278  Sum_probs=64.3

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHH---HHcCCc--EEecCCCHHHHHHHcCCccEEEEc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAI---ERLGAD--SFLVSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~---~~~ga~--~~v~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      +.++++++-+|+|. |..+..+++..+ .+++.++.++...+.+.   +.++..  .++..+..+......+.+|+|+-.
T Consensus        17 ~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~   95 (124)
T TIGR02469        17 LRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPDRVFIG   95 (124)
T ss_pred             CCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCCEEEEC
Confidence            56788888899876 888888998764 68999998877654442   334432  222221111122234579999975


Q ss_pred             cCCc---ccHHHHHHhhccCCEEEEEc
Q 021300          255 VSAV---HPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       255 ~g~~---~~~~~~~~~l~~~G~~v~~G  278 (314)
                      .+..   ..+..+.+.|+++|+++...
T Consensus        96 ~~~~~~~~~l~~~~~~Lk~gG~li~~~  122 (124)
T TIGR02469        96 GSGGLLQEILEAIWRRLRPGGRIVLNA  122 (124)
T ss_pred             CcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence            4332   24778999999999998764

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.85  E-value=0.017  Score=49.73  Aligned_cols=106  Identities=13%  Similarity=0.206  Sum_probs=68.2

Q ss_pred             hhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe---EEEEeCC----hhhH-------HHHHHHcCCcEEec
Q 021300          169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK---VTVISTS----PSKK-------SEAIERLGADSFLV  234 (314)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~---vi~v~~~----~~~~-------~~~~~~~ga~~~v~  234 (314)
                      .....+++..+.--.+.+++|+|+|..|..++..+...|++   ++++.+.    .++.       .++.+.++... ..
T Consensus        10 AG~~~al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~   88 (226)
T cd05311          10 AGLLNALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG   88 (226)
T ss_pred             HHHHHHHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc
Confidence            33444565554335678999999999999999999888975   7788877    3332       34455544221 11


Q ss_pred             CCCHHHHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcC
Q 021300          235 SRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       235 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                         .+ +.+...++|++|.+++........++.|.++..++.+..
T Consensus        89 ---~~-l~~~l~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~lsn  129 (226)
T cd05311          89 ---GT-LKEALKGADVFIGVSRPGVVKKEMIKKMAKDPIVFALAN  129 (226)
T ss_pred             ---CC-HHHHHhcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeCC
Confidence               11 222334599999999733323567788888777776653

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.85  E-value=0.018  Score=52.26  Aligned_cols=94  Identities=20%  Similarity=0.252  Sum_probs=66.2

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHHcCCccEEEEccCCcc----
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAAMGTMDGIIDTVSAVH----  259 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v-~~~~~~~~~~~~~~~d~v~d~~g~~~----  259 (314)
                      +|+|.|+ |.+|...++.+...|.+|++++|+.++...+ +..+.+.+. |-.+++.+.+...++|+||.+++...    
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l-~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~   80 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL-KEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY   80 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH-hhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence            6899998 9999999999988999999999987654333 334554332 45667777777778999999875321    


Q ss_pred             --------cHHHHHHhhccCC--EEEEEcCC
Q 021300          260 --------PLMPLIGLLKSQG--KLVLVGAP  280 (314)
Q Consensus       260 --------~~~~~~~~l~~~G--~~v~~G~~  280 (314)
                              ....+++.++..|  +++.++..
T Consensus        81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             chhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence                    1234555555544  78888764

>PRK05876 short chain dehydrogenase; Provisional

Probab=96.82  E-value=0.025  Score=50.14  Aligned_cols=75  Identities=20%  Similarity=0.313  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~~-------~~~~  248 (314)
                      .|.++||.|+ |++|...+..+...|++|+++.++.++.+++.+++   +.+.   ..|-.+++.+.++       .+.+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV   84 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999987 99999999999999999999998877666555443   3322   1244444433322       2468


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|++.|.
T Consensus        85 d~li~nAg~   93 (275)
T PRK05876         85 DVVFSNAGI   93 (275)
T ss_pred             CEEEECCCc
Confidence            999999873

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.79  E-value=0.033  Score=48.85  Aligned_cols=100  Identities=14%  Similarity=0.192  Sum_probs=64.1

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCC---hhhHHHHHHHcC-CcE---EecCCCHHHHH----HH---c
Q 021300          183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTS---PSKKSEAIERLG-ADS---FLVSRDQDEMQ----AA---M  245 (314)
Q Consensus       183 ~g~~vlI~Ga---g~vG~~a~~~a~~~g~~vi~v~~~---~~~~~~~~~~~g-a~~---~v~~~~~~~~~----~~---~  245 (314)
                      .|.+++|.|+   +++|.++++.+...|++|+++.+.   .++.+++.+++. ...   ..|-.+++.+.    ++   .
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            4678999986   599999999988899999888654   234555555552 221   12444443322    22   2


Q ss_pred             CCccEEEEccCCcc-----------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300          246 GTMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       246 ~~~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      +.+|++++++|...                             ....+++.|+++|+++.+++..+
T Consensus        86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  151 (257)
T PRK08594         86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGG  151 (257)
T ss_pred             CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCC
Confidence            46999999886310                             01234555667899999987543

>PRK06128 oxidoreductase; Provisional

Probab=96.79  E-value=0.032  Score=50.07  Aligned_cols=99  Identities=13%  Similarity=0.177  Sum_probs=63.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh--h---HHHHHHHcCCcEE---ecCCCHHHHHHH-------cC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS--K---KSEAIERLGADSF---LVSRDQDEMQAA-------MG  246 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~--~---~~~~~~~~ga~~~---v~~~~~~~~~~~-------~~  246 (314)
                      .|.++||.|+ |++|...+..+...|++|+++.+..+  +   ..+..++.+.+..   .|-.+++.+.++       .+
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  133 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG  133 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence            4678999987 99999999999989999987765432  1   2222334454322   244444333222       24


Q ss_pred             CccEEEEccCCcc--------------------------cHHHHHHhhccCCEEEEEcCCC
Q 021300          247 TMDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       247 ~~d~v~d~~g~~~--------------------------~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      ++|++|.++|...                          .++.+++.|+++|+++.+++..
T Consensus       134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~  194 (300)
T PRK06128        134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQ  194 (300)
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcc
Confidence            7999999987320                          1233445556788999987753

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.78  E-value=0.002  Score=57.16  Aligned_cols=97  Identities=31%  Similarity=0.295  Sum_probs=57.2

Q ss_pred             hcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCC-c-EEecCCCHHHHHHHcCCccEE
Q 021300          177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGA-D-SFLVSRDQDEMQAAMGTMDGI  251 (314)
Q Consensus       177 ~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~ga-~-~~v~~~~~~~~~~~~~~~d~v  251 (314)
                      ...++++|++||-+|+| -|..+..+++..|++|+.++.++++.+.+.+   +.|. + .-+...+.   ..+...||.|
T Consensus        56 ~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~---~~~~~~fD~I  131 (273)
T PF02353_consen   56 EKLGLKPGDRVLDIGCG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDY---RDLPGKFDRI  131 (273)
T ss_dssp             TTTT--TT-EEEEES-T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-G---GG---S-SEE
T ss_pred             HHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeec---cccCCCCCEE
Confidence            34458999999999987 4667788888889999999999887765533   3342 1 11222221   2334488886


Q ss_pred             EE-----ccCCc---ccHHHHHHhhccCCEEEEE
Q 021300          252 ID-----TVSAV---HPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       252 ~d-----~~g~~---~~~~~~~~~l~~~G~~v~~  277 (314)
                      +-     .+|..   ..+..+.+.|+|+|++++-
T Consensus       132 vSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq  165 (273)
T PF02353_consen  132 VSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ  165 (273)
T ss_dssp             EEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred             EEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence            54     44432   2378888999999998754

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.78  E-value=0.041  Score=48.20  Aligned_cols=99  Identities=19%  Similarity=0.254  Sum_probs=64.1

Q ss_pred             CCCEEEEEcCC---hHHHHHHHHHHHCCCeEEEEeCChhh---HHHHHHHcCCcEE--ecCCCHHHHHH-------HcCC
Q 021300          183 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSPSK---KSEAIERLGADSF--LVSRDQDEMQA-------AMGT  247 (314)
Q Consensus       183 ~g~~vlI~Gag---~vG~~a~~~a~~~g~~vi~v~~~~~~---~~~~~~~~ga~~~--v~~~~~~~~~~-------~~~~  247 (314)
                      .|.++||.|++   ++|.+.++.+...|++|+++.++.+.   .+++.++++....  .|-.+++.+.+       ..+.
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   88 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR   88 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence            57889999863   89999999998899999988887532   3444445443222  23344432222       2246


Q ss_pred             ccEEEEccCCcc-----------------------------cHHHHHHhhccCCEEEEEcCCC
Q 021300          248 MDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       248 ~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      +|+++.++|...                             ..+.++..|+.+|+++.+++..
T Consensus        89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~  151 (258)
T PRK07533         89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG  151 (258)
T ss_pred             CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence            899999987321                             1233556667779998887654

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.78  E-value=0.029  Score=49.24  Aligned_cols=75  Identities=15%  Similarity=0.243  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCChh---hHHHHHHHcCCcEE--ecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGADSF--LVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g--~vG~~a~~~a~~~g~~vi~v~~~~~---~~~~~~~~~ga~~~--v~~~~~~~~~~~-------~~~  247 (314)
                      .|.++||.|+ +  ++|.+.++.+...|++|++..+++.   ..+++.++.|....  .|-.+++.+.++       .+.
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS   86 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5678899987 4  7999998888888999988877632   23344444453322  355555433322       246


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|+++++.|.
T Consensus        87 iDilVnnag~   96 (260)
T PRK06603         87 FDFLLHGMAF   96 (260)
T ss_pred             ccEEEEcccc
Confidence            9999998873

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.78  E-value=0.026  Score=52.62  Aligned_cols=96  Identities=27%  Similarity=0.403  Sum_probs=72.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      -.+.++||+|+|-+|..++..+...|. ++++.-|..++..++++++|+..+-    .+.+......+|+||-+++.+..
T Consensus       176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~----l~el~~~l~~~DvVissTsa~~~  251 (414)
T COG0373         176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVA----LEELLEALAEADVVISSTSAPHP  251 (414)
T ss_pred             cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeec----HHHHHHhhhhCCEEEEecCCCcc
Confidence            477899999999999999999999995 8888899999999999999965431    23334445679999999987642


Q ss_pred             ---HHHHHHhhcc-CC-EEEEEcCCC
Q 021300          261 ---LMPLIGLLKS-QG-KLVLVGAPE  281 (314)
Q Consensus       261 ---~~~~~~~l~~-~G-~~v~~G~~~  281 (314)
                         -....+.++. .. -+++++.|.
T Consensus       252 ii~~~~ve~a~~~r~~~livDiavPR  277 (414)
T COG0373         252 IITREMVERALKIRKRLLIVDIAVPR  277 (414)
T ss_pred             ccCHHHHHHHHhcccCeEEEEecCCC
Confidence               2334445543 23 577888874

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.76  E-value=0.014  Score=49.49  Aligned_cols=113  Identities=15%  Similarity=0.043  Sum_probs=68.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      -.|.+|||+|+|.+|...++.+...|++++++.+... ...++.+. +. .......  .......++|+||-++++.. 
T Consensus         8 l~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~-~~-i~~~~~~--~~~~~l~~adlViaaT~d~e-   82 (202)
T PRK06718          8 LSNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEE-GK-IRWKQKE--FEPSDIVDAFLVIAATNDPR-   82 (202)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhC-CC-EEEEecC--CChhhcCCceEEEEcCCCHH-
Confidence            3568999999999999999888889999988876532 22333322 21 1111111  11122357999999999886 


Q ss_pred             HHHHHHhhccCCEEEEEcCCCCCcccchhhhhc-CceeEe
Q 021300          261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLM-GEEEDS  299 (314)
Q Consensus       261 ~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~-~~~~i~  299 (314)
                      .+..+...+..+.++.+...+...+|-...+.. ..++|.
T Consensus        83 lN~~i~~~a~~~~lvn~~d~~~~~~f~~Pa~~~~g~l~ia  122 (202)
T PRK06718         83 VNEQVKEDLPENALFNVITDAESGNVVFPSALHRGKLTIS  122 (202)
T ss_pred             HHHHHHHHHHhCCcEEECCCCccCeEEEeeEEEcCCeEEE
Confidence            555555554556666665544444555444443 334443

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.76  E-value=0.012  Score=53.55  Aligned_cols=101  Identities=20%  Similarity=0.252  Sum_probs=70.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHH-HHCCC-eEEEEeCChhhHHHHHHHc----CCcEEecCCCHHHHHHHcCCccEEEEcc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFA-KAMGV-KVTVISTSPSKKSEAIERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a-~~~g~-~vi~v~~~~~~~~~~~~~~----ga~~~v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      +...+++|+|+|..|...+..+ ...+. ++.++.+++++.+++.+++    +.+.. ...+   ..+.....|+|+.++
T Consensus       125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~~~---~~~~~~~aDiVi~aT  200 (325)
T PRK08618        125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VVNS---ADEAIEEADIIVTVT  200 (325)
T ss_pred             CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-EeCC---HHHHHhcCCEEEEcc
Confidence            5567899999999998777554 34566 7778888888887777654    43322 2233   233446799999999


Q ss_pred             CCcccHHHHHHhhccCCEEEEEcCCC-CCcccch
Q 021300          256 SAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPA  288 (314)
Q Consensus       256 g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~  288 (314)
                      ++.+.+ .. ..+++|-.++.+|... +..++|.
T Consensus       201 ~s~~p~-i~-~~l~~G~hV~~iGs~~p~~~E~~~  232 (325)
T PRK08618        201 NAKTPV-FS-EKLKKGVHINAVGSFMPDMQELPS  232 (325)
T ss_pred             CCCCcc-hH-HhcCCCcEEEecCCCCcccccCCH
Confidence            877533 34 8889988999999864 3456665

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.73  E-value=0.02  Score=48.50  Aligned_cols=96  Identities=28%  Similarity=0.294  Sum_probs=64.1

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHH---HcCCc---EEecCCCHHHHHHHcCCccEE
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIE---RLGAD---SFLVSRDQDEMQAAMGTMDGI  251 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~---~~ga~---~~v~~~~~~~~~~~~~~~d~v  251 (314)
                      .++++++||=+|+|. |..++.+++..+  .+++.++.+++..+.+.+   +.+..   .++..+..+.. ...+.||.|
T Consensus        69 ~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~-~~~~~fD~I  146 (205)
T PRK13944         69 EPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGL-EKHAPFDAI  146 (205)
T ss_pred             CCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCC-ccCCCccEE
Confidence            368999999999865 777777777663  589999999876544433   33432   22222211111 113479999


Q ss_pred             EEccCCcccHHHHHHhhccCCEEEEE
Q 021300          252 IDTVSAVHPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       252 ~d~~g~~~~~~~~~~~l~~~G~~v~~  277 (314)
                      +-+.........+.+.|++||+++..
T Consensus       147 i~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        147 IVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             EEccCcchhhHHHHHhcCcCcEEEEE
Confidence            87766555567888999999999774

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.72  E-value=0.039  Score=48.13  Aligned_cols=99  Identities=14%  Similarity=0.220  Sum_probs=62.8

Q ss_pred             CCCEEEEEcCC---hHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC-c--E-EecCCCHHHHH----HH---cCCc
Q 021300          183 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-D--S-FLVSRDQDEMQ----AA---MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Gag---~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga-~--~-~v~~~~~~~~~----~~---~~~~  248 (314)
                      .|.+++|.|++   ++|.+.++.+...|++|+++.++. +..+..+++.. .  . -.|-.+++.+.    ++   .+.+
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            46889999874   899999999999999999888774 33333344321 1  1 12334443222    22   2469


Q ss_pred             cEEEEccCCcc-----------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300          249 DGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       249 d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      |++++++|...                             ..+.+++.|+.+|+++.+++..+
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~  147 (252)
T PRK06079         85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGS  147 (252)
T ss_pred             CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCc
Confidence            99999987320                             12234556667799988876543

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.72  E-value=0.03  Score=48.83  Aligned_cols=75  Identities=19%  Similarity=0.264  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcCCcE---EecCCCHHHHHHH-------cCCccE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG  250 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~~~~~ga~~---~v~~~~~~~~~~~-------~~~~d~  250 (314)
                      .|.++||.|+ +++|.+.++.+...|++|+++.+... +..+..++.+.+.   ..|-.+++.+.++       .+.+|+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~   86 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI   86 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5788999987 99999999999999999988877543 2223334455432   2344454433322       246999


Q ss_pred             EEEccCC
Q 021300          251 IIDTVSA  257 (314)
Q Consensus       251 v~d~~g~  257 (314)
                      ++++.|.
T Consensus        87 lv~~ag~   93 (251)
T PRK12481         87 LINNAGI   93 (251)
T ss_pred             EEECCCc
Confidence            9999873

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=96.71  E-value=0.016  Score=51.73  Aligned_cols=131  Identities=24%  Similarity=0.288  Sum_probs=77.5

Q ss_pred             CCceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHH
Q 021300          146 EHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAI  224 (314)
Q Consensus       146 ~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~  224 (314)
                      ....+++..++.|...    ....|++..-..-..+++|.++|=+|+|+ |.+++..+|. |+ +++.++.++-..+...
T Consensus       129 ~~~~i~lDPGlAFGTG----~HpTT~lcL~~Le~~~~~g~~vlDvGcGS-GILaIAa~kL-GA~~v~g~DiDp~AV~aa~  202 (300)
T COG2264         129 DELNIELDPGLAFGTG----THPTTSLCLEALEKLLKKGKTVLDVGCGS-GILAIAAAKL-GAKKVVGVDIDPQAVEAAR  202 (300)
T ss_pred             CceEEEEccccccCCC----CChhHHHHHHHHHHhhcCCCEEEEecCCh-hHHHHHHHHc-CCceEEEecCCHHHHHHHH
Confidence            3667778877766433    34444443222222357999999899865 7777777765 66 6888888775543332


Q ss_pred             H---HcCCcEEecCCCHHHHHHHc-CCccEEEEccCCc---ccHHHHHHhhccCCEEEEEcCCCC
Q 021300          225 E---RLGADSFLVSRDQDEMQAAM-GTMDGIIDTVSAV---HPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       225 ~---~~ga~~~v~~~~~~~~~~~~-~~~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      +   .-+.+..+.....+...... +.||+|+-++=..   ...+...+.++++|++++.|-...
T Consensus       203 eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl~~  267 (300)
T COG2264         203 ENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGILED  267 (300)
T ss_pred             HHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeehHh
Confidence            2   12222100001111112223 4799999877321   235667788999999999998653

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.71  E-value=0.0024  Score=47.86  Aligned_cols=93  Identities=23%  Similarity=0.215  Sum_probs=62.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHH
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM  262 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~  262 (314)
                      .|.+|||+|+|.+|..-++.+...|++++++....+   .. +  +--.... +.  . .....++++|+-++++...-.
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~~---~~-~--~~i~~~~-~~--~-~~~l~~~~lV~~at~d~~~n~   75 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEIE---FS-E--GLIQLIR-RE--F-EEDLDGADLVFAATDDPELNE   75 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSEH---HH-H--TSCEEEE-SS----GGGCTTESEEEE-SS-HHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchh---hh-h--hHHHHHh-hh--H-HHHHhhheEEEecCCCHHHHH
Confidence            578899999999999999999999999999998861   11 1  2211211 11  1 233567999999999987555


Q ss_pred             HHHHhhccCCEEEEEcCCCCCcc
Q 021300          263 PLIGLLKSQGKLVLVGAPEKPLE  285 (314)
Q Consensus       263 ~~~~~l~~~G~~v~~G~~~~~~~  285 (314)
                      ......+..|.++.+...+...+
T Consensus        76 ~i~~~a~~~~i~vn~~D~p~~~d   98 (103)
T PF13241_consen   76 AIYADARARGILVNVVDDPELCD   98 (103)
T ss_dssp             HHHHHHHHTTSEEEETT-CCCCS
T ss_pred             HHHHHHhhCCEEEEECCCcCCCe
Confidence            56666677899888877655433

>PRK06197 short chain dehydrogenase; Provisional

Probab=96.70  E-value=0.03  Score=50.34  Aligned_cols=75  Identities=25%  Similarity=0.258  Sum_probs=51.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----C-CcE---EecCCCHHHHHHH-------c
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----G-ADS---FLVSRDQDEMQAA-------M  245 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----g-a~~---~v~~~~~~~~~~~-------~  245 (314)
                      ..|.++||.|+ |++|..+++.+...|++++++.++.++.+++.+++    + .+.   ..|-.+.+.+.++       .
T Consensus        14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            35688999987 99999999988888999999999877654443332    1 221   1244444333322       2


Q ss_pred             CCccEEEEccC
Q 021300          246 GTMDGIIDTVS  256 (314)
Q Consensus       246 ~~~d~v~d~~g  256 (314)
                      +++|++|.++|
T Consensus        94 ~~iD~li~nAg  104 (306)
T PRK06197         94 PRIDLLINNAG  104 (306)
T ss_pred             CCCCEEEECCc
Confidence            36999999987

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=96.70  E-value=0.041  Score=47.91  Aligned_cols=75  Identities=19%  Similarity=0.396  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.++||.|+ |++|...++.+...|++++++.+++++..++.+++   +....   .|-.+++.+.+.       .+.+
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   87 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI   87 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999987 99999999999999999999999877665554443   32221   244444433322       2469


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |+++.+.|.
T Consensus        88 d~vi~~ag~   96 (254)
T PRK08085         88 DVLINNAGI   96 (254)
T ss_pred             CEEEECCCc
Confidence            999999974

>PRK09072 short chain dehydrogenase; Provisional

Probab=96.69  E-value=0.035  Score=48.62  Aligned_cols=75  Identities=19%  Similarity=0.320  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc--CCc-EE--ecCCCHHHHHHH------cCCccE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--GAD-SF--LVSRDQDEMQAA------MGTMDG  250 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~--ga~-~~--v~~~~~~~~~~~------~~~~d~  250 (314)
                      ++.++||.|+ |.+|...++.+...|++|+++++++++..++.+++  +.. ..  .|-.+++.+..+      .+.+|.
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~   83 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV   83 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence            4678999987 99999999999889999999999987776665543  211 11  234444332222      246899


Q ss_pred             EEEccCC
Q 021300          251 IIDTVSA  257 (314)
Q Consensus       251 v~d~~g~  257 (314)
                      ++.++|.
T Consensus        84 lv~~ag~   90 (263)
T PRK09072         84 LINNAGV   90 (263)
T ss_pred             EEECCCC
Confidence            9999874

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=96.65  E-value=0.047  Score=46.98  Aligned_cols=75  Identities=24%  Similarity=0.329  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHH-------cCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~-------~~~~d~v  251 (314)
                      ++.++||.|+ |.+|...++.+...|+.|++..++.++.+++.+.++....   .|-.+.+.+.++       .+++|.+
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL   84 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999997 9999999999988999888888887777666655553221   233444333322       2469999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      |.+.|.
T Consensus        85 i~~ag~   90 (245)
T PRK12936         85 VNNAGI   90 (245)
T ss_pred             EECCCC
Confidence            999884

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.64  E-value=0.0056  Score=54.06  Aligned_cols=109  Identities=21%  Similarity=0.223  Sum_probs=73.2

Q ss_pred             hhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCc-EE-ecCCCHHHHHH
Q 021300          169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGAD-SF-LVSRDQDEMQA  243 (314)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~ga~-~~-v~~~~~~~~~~  243 (314)
                      ..++..+....+++||++||=+|+|- |.+++..|+..|++|+.++-++++...+.+   +.|.. .+ +..   ...+.
T Consensus        58 ~~k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l---~d~rd  133 (283)
T COG2230          58 RAKLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRL---QDYRD  133 (283)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEe---ccccc
Confidence            33444454556699999999999865 667889999999999999999987655544   34533 11 101   11122


Q ss_pred             HcCCccEEE-----EccCCc---ccHHHHHHhhccCCEEEEEcCCC
Q 021300          244 AMGTMDGII-----DTVSAV---HPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       244 ~~~~~d~v~-----d~~g~~---~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      ..+.||-|+     +.+|..   .-+..+.+.|+++|++.+...+.
T Consensus       134 ~~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~  179 (283)
T COG2230         134 FEEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG  179 (283)
T ss_pred             cccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence            334477754     455542   24778899999999988876543

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.63  E-value=0.012  Score=52.79  Aligned_cols=75  Identities=21%  Similarity=0.371  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.++||.|+ |++|...++.+...|++|++++++.++.+++.+++   +.+..   .|-.+++.+.+.       .+.+
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  118 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV  118 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4578999987 99999999999889999999999987766654443   32221   244444433322       2479


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |+++.++|.
T Consensus       119 d~li~~AG~  127 (293)
T PRK05866        119 DILINNAGR  127 (293)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.63  E-value=0.038  Score=48.92  Aligned_cols=100  Identities=14%  Similarity=0.170  Sum_probs=64.1

Q ss_pred             CCCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCh---hhHHHHHHHcCCcE--EecCCCHHHHHH----H---cC
Q 021300          182 KPGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERLGADS--FLVSRDQDEMQA----A---MG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga---g~vG~~a~~~a~~~g~~vi~v~~~~---~~~~~~~~~~ga~~--~v~~~~~~~~~~----~---~~  246 (314)
                      -.|.++||.|+   +++|.+.++.+...|++|+++.+++   ++.+++.++++...  -.|-.+++.+.+    +   .+
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   87 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG   87 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence            45678999986   5899999999999999998877653   33445555556322  224444433222    2   24


Q ss_pred             CccEEEEccCCcc-----------------------------cHHHHHHhhccCCEEEEEcCCC
Q 021300          247 TMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       247 ~~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      .+|++++++|...                             ..+.+++.++.+|+++.+++..
T Consensus        88 ~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~  151 (272)
T PRK08159         88 KLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYG  151 (272)
T ss_pred             CCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence            6899999987320                             1222345566679998887654

>PRK12367 short chain dehydrogenase; Provisional

Probab=96.63  E-value=0.014  Score=50.86  Aligned_cols=74  Identities=22%  Similarity=0.337  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc--EEecCCCHHHHHHHcCCccEEEEccCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~--~~v~~~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      .|.+++|.|+ |++|...++.+...|++|+++.++.....+... .+..  ...|-.+.+.+.+..+.+|++|+++|.
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~   89 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND-ESPNEWIKWECGKEESLDKQLASLDVLILNHGI   89 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc-cCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence            3678999987 999999999998999999998887632222111 1111  223555566666666789999999974

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.61  E-value=0.018  Score=50.50  Aligned_cols=74  Identities=27%  Similarity=0.289  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE---EecCCCHHHHH----HH---cCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQ----AA---MGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~---~v~~~~~~~~~----~~---~~~~d~v  251 (314)
                      ++.+++|.|+ |++|...++.+...|++|+++.++.++.+++.+..+.+.   ..|-.+.+.+.    +.   .+.+|++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   83 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL   83 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4678999987 999999999999999999999998877766655444321   12444433222    22   2468999


Q ss_pred             EEccC
Q 021300          252 IDTVS  256 (314)
Q Consensus       252 ~d~~g  256 (314)
                      +.+.|
T Consensus        84 i~~Ag   88 (262)
T TIGR03325        84 IPNAG   88 (262)
T ss_pred             EECCC
Confidence            99987

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07574 formate dehydrogenase; Provisional

Probab=96.60  E-value=0.019  Score=53.46  Aligned_cols=90  Identities=20%  Similarity=0.260  Sum_probs=63.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH-
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL-  261 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~-  261 (314)
                      .|.+|.|+|.|.+|...++.++.+|.+|+++.+..... +..+.++....   .   .+.++....|+|+-+....... 
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~-~~~~~~g~~~~---~---~l~ell~~aDvV~l~lPlt~~T~  263 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPE-EVEQELGLTYH---V---SFDSLVSVCDVVTIHCPLHPETE  263 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCch-hhHhhcCceec---C---CHHHHhhcCCEEEEcCCCCHHHH
Confidence            57889999999999999999999999999998775322 22234454321   1   2345556789988887633212 


Q ss_pred             ----HHHHHhhccCCEEEEEcC
Q 021300          262 ----MPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       262 ----~~~~~~l~~~G~~v~~G~  279 (314)
                          ...+..|+++..+|.++.
T Consensus       264 ~li~~~~l~~mk~ga~lIN~aR  285 (385)
T PRK07574        264 HLFDADVLSRMKRGSYLVNTAR  285 (385)
T ss_pred             HHhCHHHHhcCCCCcEEEECCC
Confidence                346778888888888876

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.60  E-value=0.02  Score=48.91  Aligned_cols=97  Identities=30%  Similarity=0.351  Sum_probs=63.0

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHH---HHcCCcEE-ecCCCHHHHHHHcCCccEEEE
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAI---ERLGADSF-LVSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~---~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d  253 (314)
                      .+++|++||-+|+|. |..++.+++..+.  +|+.++.+++....+.   +++|.+.+ +...+..........||+|+-
T Consensus        74 ~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Ii~  152 (215)
T TIGR00080        74 ELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGWEPLAPYDRIYV  152 (215)
T ss_pred             CCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCCcccCCCCEEEE
Confidence            378999999999865 7777788887653  6889998877654443   33443321 112221111111247999886


Q ss_pred             ccCCcccHHHHHHhhccCCEEEEE
Q 021300          254 TVSAVHPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       254 ~~g~~~~~~~~~~~l~~~G~~v~~  277 (314)
                      ............+.|+++|+++..
T Consensus       153 ~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       153 TAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             cCCcccccHHHHHhcCcCcEEEEE
Confidence            655555577888999999998875

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.59  E-value=0.0076  Score=46.93  Aligned_cols=86  Identities=20%  Similarity=0.326  Sum_probs=55.0

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCeEEEEe-CChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHH
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP  263 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~-~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~  263 (314)
                      -+|-|+|+|.+|......++..|..+..+. ++.+..+++.+.++...+.+.      .+....+|++|-++.+.. +..
T Consensus        11 l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~------~~~~~~aDlv~iavpDda-I~~   83 (127)
T PF10727_consen   11 LKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDL------EEILRDADLVFIAVPDDA-IAE   83 (127)
T ss_dssp             -EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----T------TGGGCC-SEEEE-S-CCH-HHH
T ss_pred             cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccc------ccccccCCEEEEEechHH-HHH
Confidence            568899999999999999999999888765 444456666656665544332      234567999999999885 888


Q ss_pred             HHHhhccC-----CEEEEE
Q 021300          264 LIGLLKSQ-----GKLVLV  277 (314)
Q Consensus       264 ~~~~l~~~-----G~~v~~  277 (314)
                      +...|...     |+++.-
T Consensus        84 va~~La~~~~~~~g~iVvH  102 (127)
T PF10727_consen   84 VAEQLAQYGAWRPGQIVVH  102 (127)
T ss_dssp             HHHHHHCC--S-TT-EEEE
T ss_pred             HHHHHHHhccCCCCcEEEE
Confidence            88887654     655443

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.59  E-value=0.019  Score=51.27  Aligned_cols=95  Identities=19%  Similarity=0.148  Sum_probs=72.1

Q ss_pred             ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (314)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~  241 (314)
                      .+||+..+....++..+.--.|.+|.|+|. +.+|.-.+.++...|++|++..+....                     .
T Consensus       138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~---------------------l  196 (301)
T PRK14194        138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTD---------------------A  196 (301)
T ss_pred             CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCC---------------------H
Confidence            467777777777777664468999999998 699999999999999999888655432                     2


Q ss_pred             HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCC
Q 021300          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      .+.....|+|+-++|....+...+  +++|..++.+|..
T Consensus       197 ~e~~~~ADIVIsavg~~~~v~~~~--ik~GaiVIDvgin  233 (301)
T PRK14194        197 KALCRQADIVVAAVGRPRLIDADW--LKPGAVVIDVGIN  233 (301)
T ss_pred             HHHHhcCCEEEEecCChhcccHhh--ccCCcEEEEeccc
Confidence            234455888999998876555444  8889999999854

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.58  E-value=0.013  Score=47.45  Aligned_cols=111  Identities=14%  Similarity=0.030  Sum_probs=64.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~  261 (314)
                      -.|.+|+|+|+|.+|..-++.+...|++|+++.  ++..+++. +++.-. ...+..  ...-..++|+|+-++++.. .
T Consensus        11 l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIs--p~~~~~l~-~l~~i~-~~~~~~--~~~dl~~a~lViaaT~d~e-~   83 (157)
T PRK06719         11 LHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVS--PEICKEMK-ELPYIT-WKQKTF--SNDDIKDAHLIYAATNQHA-V   83 (157)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEc--CccCHHHH-hccCcE-EEeccc--ChhcCCCceEEEECCCCHH-H
Confidence            467899999999999998888888999998884  33334443 344211 111111  1112357999999999886 5


Q ss_pred             HHHHHhhccCCEEEEEcCCCCCcccchhhhhc-CceeEe
Q 021300          262 MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLM-GEEEDS  299 (314)
Q Consensus       262 ~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~-~~~~i~  299 (314)
                      +..+...++.+.++.....+...+|-...... .+..+.
T Consensus        84 N~~i~~~a~~~~~vn~~d~~~~~~f~~pa~v~~~~l~ia  122 (157)
T PRK06719         84 NMMVKQAAHDFQWVNVVSDGTESSFHTPGVIRNDEYVVT  122 (157)
T ss_pred             HHHHHHHHHHCCcEEECCCCCcCcEEeeeEEEECCeEEE
Confidence            56555554433344443333334444434333 334443

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.57  E-value=0.027  Score=49.95  Aligned_cols=95  Identities=20%  Similarity=0.197  Sum_probs=72.1

Q ss_pred             ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (314)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~  241 (314)
                      ..||+..+.+..++....--.|.+++|+|. ..+|.-...+++..+++|++.-+....                     +
T Consensus       138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~---------------------l  196 (285)
T PRK10792        138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKN---------------------L  196 (285)
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCC---------------------H
Confidence            457777777777877664457999999997 669999999999999999877554221                     2


Q ss_pred             HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCC
Q 021300          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      ++....+|+++.++|.+..+.  -+.++++-.++.+|-.
T Consensus       197 ~~~~~~ADIvi~avG~p~~v~--~~~vk~gavVIDvGin  233 (285)
T PRK10792        197 RHHVRNADLLVVAVGKPGFIP--GEWIKPGAIVIDVGIN  233 (285)
T ss_pred             HHHHhhCCEEEEcCCCccccc--HHHcCCCcEEEEcccc
Confidence            344556899999999886433  3788999999999943

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=96.56  E-value=0.044  Score=47.80  Aligned_cols=98  Identities=17%  Similarity=0.170  Sum_probs=63.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-CCcEE-ecCCC-HHHHHHHc-CCccEEEEccCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-GADSF-LVSRD-QDEMQAAM-GTMDGIIDTVSA  257 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~-ga~~~-v~~~~-~~~~~~~~-~~~d~v~d~~g~  257 (314)
                      .+.++||+|+ |.+|...++.+...|.+|+++.+++++........ ++..+ .|..+ .+.+.+.. .++|++|.+.|.
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~   95 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGF   95 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCC
Confidence            4578999997 99999999988888999999998876554332211 23222 23333 33333444 579999998774


Q ss_pred             cc-------------cHHHHHHhhccC--CEEEEEcCC
Q 021300          258 VH-------------PLMPLIGLLKSQ--GKLVLVGAP  280 (314)
Q Consensus       258 ~~-------------~~~~~~~~l~~~--G~~v~~G~~  280 (314)
                      ..             ....+++.++..  ++++.++..
T Consensus        96 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~  133 (251)
T PLN00141         96 RRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI  133 (251)
T ss_pred             CcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence            21             134455555443  688888764

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.55  E-value=0.059  Score=46.93  Aligned_cols=75  Identities=17%  Similarity=0.309  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHH-------cCCccEEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAA-------MGTMDGIID  253 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~-------~~~~d~v~d  253 (314)
                      .+.+++|.|+ |++|...++.+...|++|+++.+..++..+..++.+...+ .|-.+++.+.++       .+++|++|.
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~   85 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN   85 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4678999987 9999999999988999998876654433222233343222 244454433322       246999999


Q ss_pred             ccCC
Q 021300          254 TVSA  257 (314)
Q Consensus       254 ~~g~  257 (314)
                      +.|.
T Consensus        86 ~ag~   89 (255)
T PRK06463         86 NAGI   89 (255)
T ss_pred             CCCc
Confidence            9874

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=96.55  E-value=0.02  Score=48.87  Aligned_cols=96  Identities=19%  Similarity=0.170  Sum_probs=63.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe----------------cCCCH-HHHHHH
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL----------------VSRDQ-DEMQAA  244 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v----------------~~~~~-~~~~~~  244 (314)
                      .++.+||+.|+|. |.-++.+|+ .|.+|+.++.++...+.+.++.+.....                ...|. +.-.+.
T Consensus        33 ~~~~rvLd~GCG~-G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~  110 (213)
T TIGR03840        33 PAGARVFVPLCGK-SLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAAD  110 (213)
T ss_pred             CCCCeEEEeCCCc-hhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCccc
Confidence            5778999999875 777777775 6999999999998887765544432100                00000 000111


Q ss_pred             cCCccEEEEccCC--------cccHHHHHHhhccCCEEEEEcC
Q 021300          245 MGTMDGIIDTVSA--------VHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       245 ~~~~d~v~d~~g~--------~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      .+.||.++|...-        ...+..+.++|+++|++++++.
T Consensus       111 ~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~  153 (213)
T TIGR03840       111 LGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL  153 (213)
T ss_pred             CCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence            2468999997541        1236788999999998666644

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK05717 oxidoreductase; Validated

Probab=96.54  E-value=0.022  Score=49.65  Aligned_cols=76  Identities=18%  Similarity=0.330  Sum_probs=54.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHH----HH---cCCccE
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQ----AA---MGTMDG  250 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~----~~---~~~~d~  250 (314)
                      ..|.+++|.|+ |.+|...+..+...|++|+++.++.++..++.++++....   .|-.+.+.+.    ++   .+.+|+
T Consensus         8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717          8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            45788999987 9999999999988999999998887766666666653321   2344444332    22   236899


Q ss_pred             EEEccCC
Q 021300          251 IIDTVSA  257 (314)
Q Consensus       251 v~d~~g~  257 (314)
                      +|.+.|.
T Consensus        88 li~~ag~   94 (255)
T PRK05717         88 LVCNAAI   94 (255)
T ss_pred             EEECCCc
Confidence            9999874

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.54  E-value=0.06  Score=39.38  Aligned_cols=86  Identities=20%  Similarity=0.351  Sum_probs=60.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHCC---CeEEEE-eCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMG---VKVTVI-STSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g---~~vi~v-~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~  261 (314)
                      ++.|+|+|.+|.+.+.-+...|   .+++++ .+++++.+++.++++..... ....+.+    +..|+||-++-... +
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~----~~advvilav~p~~-~   74 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA-DDNEEAA----QEADVVILAVKPQQ-L   74 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES-EEHHHHH----HHTSEEEE-S-GGG-H
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc-CChHHhh----ccCCEEEEEECHHH-H
Confidence            4778899999999999999999   788855 99999999999999865432 1222332    35999999998765 4


Q ss_pred             HHHHHhh---ccCCEEEEE
Q 021300          262 MPLIGLL---KSQGKLVLV  277 (314)
Q Consensus       262 ~~~~~~l---~~~G~~v~~  277 (314)
                      ...++.+   .++..++++
T Consensus        75 ~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   75 PEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             HHHHHHHHHHHTTSEEEEE
T ss_pred             HHHHHHHhhccCCCEEEEe
Confidence            5554444   455666655

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.53  E-value=0.025  Score=51.19  Aligned_cols=90  Identities=19%  Similarity=0.293  Sum_probs=63.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc-
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-  260 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~-  260 (314)
                      -.|.+|.|+|.|.+|...++.++.+|.+|+++.+..++..      +.+.+.   ..+.+.++....|+|+.+...... 
T Consensus       134 l~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~---~~~~l~e~l~~aDvvv~~lPlt~~T  204 (312)
T PRK15469        134 REDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA---GREELSAFLSQTRVLINLLPNTPET  204 (312)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec---ccccHHHHHhcCCEEEECCCCCHHH
Confidence            3678999999999999999999999999999887543211      222221   223445666678888888764322 


Q ss_pred             ----HHHHHHhhccCCEEEEEcCC
Q 021300          261 ----LMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       261 ----~~~~~~~l~~~G~~v~~G~~  280 (314)
                          -...++.|+++..+|.+|..
T Consensus       205 ~~li~~~~l~~mk~ga~lIN~aRG  228 (312)
T PRK15469        205 VGIINQQLLEQLPDGAYLLNLARG  228 (312)
T ss_pred             HHHhHHHHHhcCCCCcEEEECCCc
Confidence                13467788888888888773

>PRK06101 short chain dehydrogenase; Provisional

Probab=96.53  E-value=0.051  Score=46.95  Aligned_cols=72  Identities=17%  Similarity=0.051  Sum_probs=48.9

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-CcE-EecCCCHHHHHHHc----CCccEEEEccC
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADS-FLVSRDQDEMQAAM----GTMDGIIDTVS  256 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-a~~-~v~~~~~~~~~~~~----~~~d~v~d~~g  256 (314)
                      .+++|.|+ |++|...+..+...|++|+++++++++.+++.+... ... ..|-.+++.+.++.    ...|.++.+.|
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag   80 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG   80 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence            46888887 999999888888889999999999877766654332 211 23445555444432    24577776665

>PRK06940 short chain dehydrogenase; Provisional

Probab=96.51  E-value=0.046  Score=48.41  Aligned_cols=95  Identities=21%  Similarity=0.325  Sum_probs=60.9

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHH------cCCccEEE
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA------MGTMDGII  252 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~~------~~~~d~v~  252 (314)
                      .+++|.|+|++|...+..+. .|++|+++++++++.+++.+++   +.+.   -.|-.+++.+.++      .+.+|+++
T Consensus         3 k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~li   81 (275)
T PRK06940          3 EVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGLV   81 (275)
T ss_pred             CEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEEE
Confidence            46788888999999998885 7999999999877655554433   3322   1244444332222      24699999


Q ss_pred             EccCCcc------------------cHHHHHHhhccCCEEEEEcCC
Q 021300          253 DTVSAVH------------------PLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       253 d~~g~~~------------------~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      .++|...                  .+..+.+.++++|+++.+++.
T Consensus        82 ~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~  127 (275)
T PRK06940         82 HTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ  127 (275)
T ss_pred             ECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence            9998431                  123344555667777777654

>PRK06181 short chain dehydrogenase; Provisional

Probab=96.50  E-value=0.034  Score=48.64  Aligned_cols=74  Identities=15%  Similarity=0.287  Sum_probs=50.8

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHH-------cCCcc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTMD  249 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~~-------~~~~d  249 (314)
                      +.++||.|+ |.+|..+++.+...|++|+++.+++...+++.+++   +...   ..|..+.+.+...       .+++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            357899987 99999999999889999999999876655544332   3322   1244444333222       23689


Q ss_pred             EEEEccCC
Q 021300          250 GIIDTVSA  257 (314)
Q Consensus       250 ~v~d~~g~  257 (314)
                      ++|.+.|.
T Consensus        81 ~vi~~ag~   88 (263)
T PRK06181         81 ILVNNAGI   88 (263)
T ss_pred             EEEECCCc
Confidence            99999874

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.49  E-value=0.035  Score=49.26  Aligned_cols=96  Identities=16%  Similarity=0.190  Sum_probs=71.6

Q ss_pred             cccchhhhhhhhhhHhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 021300          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (314)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag-~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~  240 (314)
                      ..+||+..+....++....--.|.+++|+|.| .+|.-.+.++...|++|++.-....                     .
T Consensus       135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~---------------------~  193 (285)
T PRK14191        135 GFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK---------------------D  193 (285)
T ss_pred             CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH---------------------H
Confidence            34677777777777766644579999999984 9999999999999999877633221                     1


Q ss_pred             HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCC
Q 021300          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       241 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      +.+....+|+++-++|.+..+.  -+.+++|..++.+|..
T Consensus       194 l~~~~~~ADIvV~AvG~p~~i~--~~~vk~GavVIDvGi~  231 (285)
T PRK14191        194 LSFYTQNADIVCVGVGKPDLIK--ASMVKKGAVVVDIGIN  231 (285)
T ss_pred             HHHHHHhCCEEEEecCCCCcCC--HHHcCCCcEEEEeecc
Confidence            2344566899999999886332  4567999999999974

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.49  E-value=0.021  Score=50.67  Aligned_cols=100  Identities=16%  Similarity=0.151  Sum_probs=65.8

Q ss_pred             hhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccE
Q 021300          172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG  250 (314)
Q Consensus       172 ~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~  250 (314)
                      ..+++..+ ...+.+++|+|+|+.+.+++..++..|+ +++++.|+.++.+++++.++...    .  +..  ....+|+
T Consensus       111 ~~~L~~~~-~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~----~--~~~--~~~~~dl  181 (272)
T PRK12550        111 AKLLASYQ-VPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW----R--PDL--GGIEADI  181 (272)
T ss_pred             HHHHHhcC-CCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc----h--hhc--ccccCCE
Confidence            34454433 3456689999999999999999998998 69999999998888887765321    0  111  1235899


Q ss_pred             EEEccCCcc-------cHHHHHHhhccCCEEEEEcCC
Q 021300          251 IIDTVSAVH-------PLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       251 v~d~~g~~~-------~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      +++|+....       ...-....+.+...++++-..
T Consensus       182 vINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~  218 (272)
T PRK12550        182 LVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVAL  218 (272)
T ss_pred             EEECCccccCCCCccccCCCCHHHcCCCCEEEEeecC
Confidence            999985221       001123446666667766543

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=96.48  E-value=0.027  Score=52.83  Aligned_cols=75  Identities=20%  Similarity=0.257  Sum_probs=54.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC--Cc-EEecCCCHHHHHHHcCCccEEEEccCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG--AD-SFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g--a~-~~v~~~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      .|.+++|.|+ |++|.+.++.+...|++|+++++++++..+..+..+  .. ...|-.+++.+.+..+++|++|.+.|.
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi  255 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI  255 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence            4679999997 999999999888899999999988765533322222  11 123556666666667789999998874

>PRK05854 short chain dehydrogenase; Provisional

Probab=96.47  E-value=0.021  Score=51.72  Aligned_cols=75  Identities=20%  Similarity=0.195  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----C-CcE---EecCCCHHHHHHH-------cC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----G-ADS---FLVSRDQDEMQAA-------MG  246 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----g-a~~---~v~~~~~~~~~~~-------~~  246 (314)
                      .|.+++|.|+ +++|..+++.+...|++|+++.++.++.+++.+++    + ...   ..|-.+.+.++++       .+
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4678999998 99999999999889999999999987665554433    2 221   1344555433322       24


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      .+|++|+++|.
T Consensus        93 ~iD~li~nAG~  103 (313)
T PRK05854         93 PIHLLINNAGV  103 (313)
T ss_pred             CccEEEECCcc
Confidence            69999999873

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.47  E-value=0.035  Score=48.58  Aligned_cols=77  Identities=19%  Similarity=0.318  Sum_probs=53.5

Q ss_pred             CCCCCEEEEEcC-C-hHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH----cCCcEE----ecCCCHHHHHHH------
Q 021300          181 DKPGMHVGVVGL-G-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGADSF----LVSRDQDEMQAA------  244 (314)
Q Consensus       181 ~~~g~~vlI~Ga-g-~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~----~ga~~~----v~~~~~~~~~~~------  244 (314)
                      +..+.++||.|+ | ++|.++++.+...|++|+++.++.++.++..++    ++...+    .|-.+++.+.++      
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            456789999987 6 799999999999999999988887665544332    343222    244444433322      


Q ss_pred             -cCCccEEEEccCC
Q 021300          245 -MGTMDGIIDTVSA  257 (314)
Q Consensus       245 -~~~~d~v~d~~g~  257 (314)
                       .+.+|++|.+.|.
T Consensus        94 ~~g~id~li~~ag~  107 (262)
T PRK07831         94 RLGRLDVLVNNAGL  107 (262)
T ss_pred             HcCCCCEEEECCCC
Confidence             2468999999984

>PLN03139 formate dehydrogenase; Provisional

Probab=96.46  E-value=0.024  Score=52.76  Aligned_cols=91  Identities=18%  Similarity=0.188  Sum_probs=63.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~  261 (314)
                      -.|.+|.|+|.|.+|...++.++.+|.+++++.+..... +..+++|+...      +.+.++....|+|+-+.......
T Consensus       197 L~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~-~~~~~~g~~~~------~~l~ell~~sDvV~l~lPlt~~T  269 (386)
T PLN03139        197 LEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDP-ELEKETGAKFE------EDLDAMLPKCDVVVINTPLTEKT  269 (386)
T ss_pred             CCCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcch-hhHhhcCceec------CCHHHHHhhCCEEEEeCCCCHHH
Confidence            368899999999999999999999999998887764322 23344554321      12334556688888877632211


Q ss_pred             -----HHHHHhhccCCEEEEEcC
Q 021300          262 -----MPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       262 -----~~~~~~l~~~G~~v~~G~  279 (314)
                           ...++.|+++..+|.++.
T Consensus       270 ~~li~~~~l~~mk~ga~lIN~aR  292 (386)
T PLN03139        270 RGMFNKERIAKMKKGVLIVNNAR  292 (386)
T ss_pred             HHHhCHHHHhhCCCCeEEEECCC
Confidence                 346778888888888876

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.46  E-value=0.02  Score=49.82  Aligned_cols=76  Identities=25%  Similarity=0.309  Sum_probs=53.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc---EEecCCCHHHHHHH-------cCC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~---~~v~~~~~~~~~~~-------~~~  247 (314)
                      ..+.+++|.|+ |.+|..++..+...|++|+++.+++++.+++.+.+   +.+   ...|-.+++.+.+.       .+.
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            45789999997 99999999999999999999999987766654432   211   12244444333322       246


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|.+.|.
T Consensus        87 ~d~li~~ag~   96 (258)
T PRK06949         87 IDILVNNSGV   96 (258)
T ss_pred             CCEEEECCCC
Confidence            8999999883

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=96.45  E-value=0.0092  Score=59.55  Aligned_cols=76  Identities=22%  Similarity=0.331  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh--------------------hHHHHHHHcCCcEEecCCC-HH-H
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--------------------KKSEAIERLGADSFLVSRD-QD-E  240 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~--------------------~~~~~~~~~ga~~~v~~~~-~~-~  240 (314)
                      .+++|+|+|+|+.|+.++..++..|.+|+++.+.+.                    ...+..+++|.+..++..- .+ .
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~~  388 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDIT  388 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcCC
Confidence            489999999999999999999999999999987652                    1335557788876555432 11 2


Q ss_pred             HHHHcCCccEEEEccCCc
Q 021300          241 MQAAMGTMDGIIDTVSAV  258 (314)
Q Consensus       241 ~~~~~~~~d~v~d~~g~~  258 (314)
                      +.++...+|.||.++|..
T Consensus       389 ~~~l~~~~DaV~latGa~  406 (639)
T PRK12809        389 FSDLTSEYDAVFIGVGTY  406 (639)
T ss_pred             HHHHHhcCCEEEEeCCCC
Confidence            334456799999999864

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.44  E-value=0.021  Score=49.80  Aligned_cols=75  Identities=12%  Similarity=0.211  Sum_probs=53.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~~-------~~~~  248 (314)
                      .|.++||.|+ +++|...++.+...|++|+++.++.++.+++.+++   +.+.   ..|-.+++.+.++       .+.+
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4788999997 99999999999999999999999887766665543   3221   2344444433222       2479


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |+++.+.|.
T Consensus        88 d~lv~~ag~   96 (253)
T PRK05867         88 DIAVCNAGI   96 (253)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.43  E-value=0.044  Score=45.75  Aligned_cols=97  Identities=23%  Similarity=0.258  Sum_probs=61.2

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHH---HHHcCCcEE-ecCCCHHHHHHHcCCccEEEEcc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEA---IERLGADSF-LVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~---~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      ++++.+||-+|+|. |..+..+++.. +++++.++.+++..+.+   .++.+.+.+ +...+...... .+.||+|+-..
T Consensus        43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~~~~-~~~fDlV~~~~  120 (187)
T PRK00107         43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEEFGQ-EEKFDVVTSRA  120 (187)
T ss_pred             cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhhCCC-CCCccEEEEcc
Confidence            45689999999854 55666666644 67999999988655333   334454322 11222222222 34799999653


Q ss_pred             CC--cccHHHHHHhhccCCEEEEEcC
Q 021300          256 SA--VHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       256 g~--~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      ..  ...+..+.+.|+++|+++.+-.
T Consensus       121 ~~~~~~~l~~~~~~LkpGG~lv~~~~  146 (187)
T PRK00107        121 VASLSDLVELCLPLLKPGGRFLALKG  146 (187)
T ss_pred             ccCHHHHHHHHHHhcCCCeEEEEEeC
Confidence            22  2346678899999999998843

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.41  E-value=0.019  Score=48.66  Aligned_cols=96  Identities=18%  Similarity=0.277  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------hhHHHHH---HHcC-CcEEe--c-C
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP-------------------SKKSEAI---ERLG-ADSFL--V-S  235 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~-------------------~~~~~~~---~~~g-a~~~v--~-~  235 (314)
                      ...+|+|+|+|++|..+++.+...|. ++++++.+.                   .+.+.+.   +++. ...+.  + .
T Consensus        20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~   99 (202)
T TIGR02356        20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER   99 (202)
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence            34779999999999999999999998 777777652                   1111111   2222 11111  1 1


Q ss_pred             CCHHHHHHHcCCccEEEEccCCcccHHHHHHhhccCCE-EEEEc
Q 021300          236 RDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGK-LVLVG  278 (314)
Q Consensus       236 ~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~-~v~~G  278 (314)
                      -+.+.+.+....+|+||+|+.+...-...-+.....++ ++..+
T Consensus       100 i~~~~~~~~~~~~D~Vi~~~d~~~~r~~l~~~~~~~~ip~i~~~  143 (202)
T TIGR02356       100 VTAENLELLINNVDLVLDCTDNFATRYLINDACVALGTPLISAA  143 (202)
T ss_pred             CCHHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence            12234445567899999999877533333334344444 44433

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK12747 short chain dehydrogenase; Provisional

Probab=96.40  E-value=0.059  Score=46.81  Aligned_cols=100  Identities=15%  Similarity=0.245  Sum_probs=61.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEe-CChhhHHHHHHHc---CCcEE---ecCCCHHH----HHHH------
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAIERL---GADSF---LVSRDQDE----MQAA------  244 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~-~~~~~~~~~~~~~---ga~~~---v~~~~~~~----~~~~------  244 (314)
                      .+.++||.|+ +++|.++++.+...|+++++.. +..++.+++.+++   +.+..   .|-.+.+.    +.++      
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            4678999987 9999999999999999988765 4444444433322   32211   12233221    1111      


Q ss_pred             -cC--CccEEEEccCCcc-------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300          245 -MG--TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       245 -~~--~~d~v~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                       .+  ++|+++.++|...                         .+..+++.+++.|+++.+++..+
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~  148 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  148 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence             12  6999999987320                         12234556667799999987643

>PRK06194 hypothetical protein; Provisional

Probab=96.40  E-value=0.029  Score=49.84  Aligned_cols=75  Identities=19%  Similarity=0.375  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.++||.|+ |++|...++.+...|++|+++.++.+...+..+++   +.+..   .|-.+.+.+.++       .+.+
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   84 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV   84 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999987 99999999998889999999998876655554443   33221   244444433332       2368


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|.++|.
T Consensus        85 d~vi~~Ag~   93 (287)
T PRK06194         85 HLLFNNAGV   93 (287)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK07985 oxidoreductase; Provisional

Probab=96.39  E-value=0.071  Score=47.75  Aligned_cols=100  Identities=17%  Similarity=0.142  Sum_probs=62.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh--hhHHHH---HHHcCCcE---EecCCCHHHHHH-------Hc
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP--SKKSEA---IERLGADS---FLVSRDQDEMQA-------AM  245 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~--~~~~~~---~~~~ga~~---~v~~~~~~~~~~-------~~  245 (314)
                      -.+.++||.|+ |++|...++.+...|++|+++.++.  +..+++   .++.+.+.   ..|-.+++.+.+       ..
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  126 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL  126 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            35678999997 9999999999999999998876542  222233   22334322   124444433322       22


Q ss_pred             CCccEEEEccCCc--------------------------ccHHHHHHhhccCCEEEEEcCCC
Q 021300          246 GTMDGIIDTVSAV--------------------------HPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       246 ~~~d~v~d~~g~~--------------------------~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      +++|+++.+.|..                          ..+..+++.|+.+|+++.+++..
T Consensus       127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~  188 (294)
T PRK07985        127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQ  188 (294)
T ss_pred             CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCch
Confidence            4689999988731                          01223445556789999987753

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=96.39  E-value=0.067  Score=46.87  Aligned_cols=100  Identities=15%  Similarity=0.166  Sum_probs=61.7

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCChh------hHHHHHHHcCCcE--EecCCCHHHHHHH-------
Q 021300          183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS------KKSEAIERLGADS--FLVSRDQDEMQAA-------  244 (314)
Q Consensus       183 ~g~~vlI~Ga---g~vG~~a~~~a~~~g~~vi~v~~~~~------~~~~~~~~~ga~~--~v~~~~~~~~~~~-------  244 (314)
                      .|.+++|.|+   +++|.+.++.+...|++|++..++.+      ...++.++.+...  ..|-.+++.+.++       
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            4678999986   48999999999889999987754322      2223322222111  1344444333222       


Q ss_pred             cCCccEEEEccCCcc-----------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300          245 MGTMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       245 ~~~~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      .+.+|+++++.|...                             ..+.+++.|+++|+++.+++..+
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~  151 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGG  151 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence            246999999987320                             12345666777899998876543

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.39  E-value=0.052  Score=46.74  Aligned_cols=74  Identities=20%  Similarity=0.425  Sum_probs=49.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v-~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      +.++||.|+ |.+|...+..+...|++++++ .+++++..++.+.+   +....   .|-.+++.+.+.       .+++
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI   84 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            468999997 999999998888889999888 77766554444332   22221   244444433322       1379


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|.+.|.
T Consensus        85 d~vi~~ag~   93 (247)
T PRK05565         85 DILVNNAGI   93 (247)
T ss_pred             CEEEECCCc
Confidence            999998874

>PLN02928 oxidoreductase family protein

Probab=96.39  E-value=0.031  Score=51.38  Aligned_cols=97  Identities=19%  Similarity=0.222  Sum_probs=64.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-----CcEEecC-CCHHHHHHHcCCccEEEEcc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-----ADSFLVS-RDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-----a~~~v~~-~~~~~~~~~~~~~d~v~d~~  255 (314)
                      -.|.++.|+|.|.+|..+++.++.+|++|+++.+...+...  ..++     ...+++. ...+.+.++....|+|+.+.
T Consensus       157 l~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l  234 (347)
T PLN02928        157 LFGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPE--DGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC  234 (347)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhh--hhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence            45889999999999999999999999999998876322111  1111     0111110 11223445566789999887


Q ss_pred             CCcc-----cHHHHHHhhccCCEEEEEcCC
Q 021300          256 SAVH-----PLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       256 g~~~-----~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      ....     .-...+..|+++..+|.+|..
T Consensus       235 Plt~~T~~li~~~~l~~Mk~ga~lINvaRG  264 (347)
T PLN02928        235 TLTKETAGIVNDEFLSSMKKGALLVNIARG  264 (347)
T ss_pred             CCChHhhcccCHHHHhcCCCCeEEEECCCc
Confidence            5321     124578889999999998863

>PRK06701 short chain dehydrogenase; Provisional

Probab=96.38  E-value=0.079  Score=47.37  Aligned_cols=100  Identities=15%  Similarity=0.216  Sum_probs=62.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhh-HHHHH---HHcCCcEE---ecCCCHHHHHHH-------cC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAI---ERLGADSF---LVSRDQDEMQAA-------MG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~-~~~~~---~~~ga~~~---v~~~~~~~~~~~-------~~  246 (314)
                      -++.++||.|+ |.+|...+..+...|++|+++.+...+ .+.+.   +..+.+..   .|-.+.+.+.++       .+
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            45788999997 999999999888899999988876432 22222   22243322   233343332221       24


Q ss_pred             CccEEEEccCCcc--------------------------cHHHHHHhhccCCEEEEEcCCC
Q 021300          247 TMDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       247 ~~d~v~d~~g~~~--------------------------~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      .+|++|.++|...                          .+..+++.+++.|+++.+++..
T Consensus       124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~  184 (290)
T PRK06701        124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSIT  184 (290)
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence            6899999887421                          0122344556678999988743

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.38  E-value=0.032  Score=49.59  Aligned_cols=96  Identities=20%  Similarity=0.265  Sum_probs=71.9

Q ss_pred             ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (314)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~  241 (314)
                      .+||+..+....++....--.|.+++|+|. ..+|.-.+.++...|++|++.-....                     .+
T Consensus       137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~---------------------~l  195 (285)
T PRK14189        137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTR---------------------DL  195 (285)
T ss_pred             CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCC---------------------CH
Confidence            467776777777777664568999999997 66699999999999999987432211                     12


Q ss_pred             HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      .+....+|+++-++|.+..+..  +.++++-.++.+|...
T Consensus       196 ~~~~~~ADIVV~avG~~~~i~~--~~ik~gavVIDVGin~  233 (285)
T PRK14189        196 AAHTRQADIVVAAVGKRNVLTA--DMVKPGATVIDVGMNR  233 (285)
T ss_pred             HHHhhhCCEEEEcCCCcCccCH--HHcCCCCEEEEccccc
Confidence            3445568999999998764433  8899999999999753

>PLN02253 xanthoxin dehydrogenase

Probab=96.37  E-value=0.031  Score=49.43  Aligned_cols=75  Identities=21%  Similarity=0.338  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--cE---EecCCCHHHHHHH-------cCCcc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DS---FLVSRDQDEMQAA-------MGTMD  249 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~~---~v~~~~~~~~~~~-------~~~~d  249 (314)
                      .+.++||.|+ |.+|.+.++.+...|++|+++.+.++..+++.++++.  +.   ..|-.+++.+.+.       .+++|
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id   96 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD   96 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            4678999987 9999999998888999999998887766666555532  11   1344555443332       24799


Q ss_pred             EEEEccCC
Q 021300          250 GIIDTVSA  257 (314)
Q Consensus       250 ~v~d~~g~  257 (314)
                      ++++++|.
T Consensus        97 ~li~~Ag~  104 (280)
T PLN02253         97 IMVNNAGL  104 (280)
T ss_pred             EEEECCCc
Confidence            99999874

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.37  E-value=0.034  Score=45.75  Aligned_cols=91  Identities=25%  Similarity=0.343  Sum_probs=63.2

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe--cCCCHHHHHHHcCCccEEEEccCCc--c-
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL--VSRDQDEMQAAMGTMDGIIDTVSAV--H-  259 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v--~~~~~~~~~~~~~~~d~v~d~~g~~--~-  259 (314)
                      +|.|+|+ |-+|...++-|+.+|-.|++++|++.+....    ....++  |--+++.+.+...++|+||++.|..  . 
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~   77 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDN   77 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----ccceeecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence            5788998 9999999999999999999999999866432    111111  1122334446667999999998754  1 


Q ss_pred             ------cHHHHHHhhccC--CEEEEEcCC
Q 021300          260 ------PLMPLIGLLKSQ--GKLVLVGAP  280 (314)
Q Consensus       260 ------~~~~~~~~l~~~--G~~v~~G~~  280 (314)
                            ..+.++..|+.-  -|+..+|.-
T Consensus        78 ~~~~~k~~~~li~~l~~agv~RllVVGGA  106 (211)
T COG2910          78 DELHSKSIEALIEALKGAGVPRLLVVGGA  106 (211)
T ss_pred             hHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence                  133466677653  478888763

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.37  E-value=0.038  Score=49.93  Aligned_cols=92  Identities=18%  Similarity=0.264  Sum_probs=62.2

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc--
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP--  260 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~--  260 (314)
                      .+|.|+|+|.+|.+.+..++..|.  +|+++++++++.+.+ ++.|....+.. +.   .+....+|+||.|+.....  
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a-~~~g~~~~~~~-~~---~~~~~~aDvViiavp~~~~~~   81 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARA-RELGLGDRVTT-SA---AEAVKGADLVILCVPVGASGA   81 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHH-HhCCCCceecC-CH---HHHhcCCCEEEECCCHHHHHH
Confidence            579999999999999998888874  788888888766554 45675221111 11   2234579999999986531  


Q ss_pred             -HHHHHHhhccCCEEEEEcCCC
Q 021300          261 -LMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       261 -~~~~~~~l~~~G~~v~~G~~~  281 (314)
                       +......++++..++.+|...
T Consensus        82 v~~~l~~~l~~~~iv~dvgs~k  103 (307)
T PRK07502         82 VAAEIAPHLKPGAIVTDVGSVK  103 (307)
T ss_pred             HHHHHHhhCCCCCEEEeCccch
Confidence             233344566777777777643

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.37  E-value=0.095  Score=46.14  Aligned_cols=74  Identities=15%  Similarity=0.254  Sum_probs=47.3

Q ss_pred             CCCEEEEEcCC---hHHHHHHHHHHHCCCeEEEEeCCh---hhHHHHHHHcCCc--EEecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERLGAD--SFLVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Gag---~vG~~a~~~a~~~g~~vi~v~~~~---~~~~~~~~~~ga~--~~v~~~~~~~~~~~-------~~~  247 (314)
                      .|.++||.|++   ++|.++++.+...|+++++..++.   +..+++.++.+..  ...|-.+++.+.++       .+.
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   84 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK   84 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence            46789999873   799999998888999998877763   2223333333321  11344554433322       246


Q ss_pred             ccEEEEccC
Q 021300          248 MDGIIDTVS  256 (314)
Q Consensus       248 ~d~v~d~~g  256 (314)
                      +|++|+++|
T Consensus        85 iD~linnAg   93 (262)
T PRK07984         85 FDGFVHSIG   93 (262)
T ss_pred             CCEEEECCc
Confidence            899999997

>PRK07791 short chain dehydrogenase; Provisional

Probab=96.36  E-value=0.074  Score=47.43  Aligned_cols=76  Identities=25%  Similarity=0.341  Sum_probs=50.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh---------hhHHHHHHHc---CCcEE---ecCCCHHHHH---
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP---------SKKSEAIERL---GADSF---LVSRDQDEMQ---  242 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~---------~~~~~~~~~~---ga~~~---v~~~~~~~~~---  242 (314)
                      -.+.++||.|+ +++|.+.++.+...|++++++.+..         ++..++.+++   +.+..   .|-.+++.+.   
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            45788999987 9999999998888999998887654         4444443333   33322   2444443322   


Q ss_pred             -HH---cCCccEEEEccCC
Q 021300          243 -AA---MGTMDGIIDTVSA  257 (314)
Q Consensus       243 -~~---~~~~d~v~d~~g~  257 (314)
                       ++   .+.+|++|++.|.
T Consensus        84 ~~~~~~~g~id~lv~nAG~  102 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHHhcCCCCEEEECCCC
Confidence             22   2479999999874

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.35  E-value=0.071  Score=42.25  Aligned_cols=96  Identities=15%  Similarity=0.076  Sum_probs=69.4

Q ss_pred             ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (314)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~  241 (314)
                      .+|+........++..+.--.|.+++|+|. ..+|.-.+.++...|+++++..+.....+                    
T Consensus         7 ~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~--------------------   66 (140)
T cd05212           7 FVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQ--------------------   66 (140)
T ss_pred             ccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHH--------------------
Confidence            456666666666766664468999999997 99999999999999999988765443222                    


Q ss_pred             HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                       +....+|+++-++|....+  --+.+++|-.++.+|...
T Consensus        67 -~~v~~ADIVvsAtg~~~~i--~~~~ikpGa~Vidvg~~~  103 (140)
T cd05212          67 -SKVHDADVVVVGSPKPEKV--PTEWIKPGATVINCSPTK  103 (140)
T ss_pred             -HHHhhCCEEEEecCCCCcc--CHHHcCCCCEEEEcCCCc
Confidence             2334578888888877533  245688888888887654

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK07478 short chain dehydrogenase; Provisional

Probab=96.35  E-value=0.033  Score=48.52  Aligned_cols=75  Identities=21%  Similarity=0.326  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.++||.|+ |++|...+..+...|++|+++.+++++.+++.+++   +.+..   .|-.+++.+.++       .+.+
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL   84 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999987 99999999999889999999999887766665443   33222   244444433322       2479


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|.++|.
T Consensus        85 d~li~~ag~   93 (254)
T PRK07478         85 DIAFNNAGT   93 (254)
T ss_pred             CEEEECCCC
Confidence            999999874

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=96.35  E-value=0.12  Score=40.26  Aligned_cols=90  Identities=14%  Similarity=0.357  Sum_probs=62.0

Q ss_pred             EEEEcC-ChHHHHHHHHHHHCC--CeEEEEe--CChhhHHHHHHHcCCcEEecCCCH--HHHH-----------------
Q 021300          187 VGVVGL-GGLGHVAVKFAKAMG--VKVTVIS--TSPSKKSEAIERLGADSFLVSRDQ--DEMQ-----------------  242 (314)
Q Consensus       187 vlI~Ga-g~vG~~a~~~a~~~g--~~vi~v~--~~~~~~~~~~~~~ga~~~v~~~~~--~~~~-----------------  242 (314)
                      |.|+|+ |++|..+..+.+.+.  .+++..+  ++-+...+.+++|....++..++.  +.++                 
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~   80 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE   80 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence            578999 999999999999987  4666554  455677788888988776655543  1222                 


Q ss_pred             ---HHc--CCccEEEEccCCcccHHHHHHhhccCCEEEE
Q 021300          243 ---AAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVL  276 (314)
Q Consensus       243 ---~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~  276 (314)
                         ++.  ..+|+++.++.+...+...+.+++.+-++.+
T Consensus        81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL  119 (129)
T PF02670_consen   81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL  119 (129)
T ss_dssp             HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred             HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence               111  2689999998777778888888887765543

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=96.34  E-value=0.1  Score=45.39  Aligned_cols=76  Identities=22%  Similarity=0.305  Sum_probs=52.5

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc--E-EecCCCHHHHHH----H---cCC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD--S-FLVSRDQDEMQA----A---MGT  247 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~--~-~v~~~~~~~~~~----~---~~~  247 (314)
                      -+|.+++|.|+ |.+|...++.+...|++++++.++++...++.++   .+..  . ..|-.+++.+..    +   .+.
T Consensus         9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   88 (256)
T PRK06124          9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR   88 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            35789999987 9999999998888899999999987765554433   3422  1 124444433222    2   246


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|.++.+.|.
T Consensus        89 id~vi~~ag~   98 (256)
T PRK06124         89 LDILVNNVGA   98 (256)
T ss_pred             CCEEEECCCC
Confidence            8999999884

>PRK05884 short chain dehydrogenase; Provisional

Probab=96.33  E-value=0.031  Score=47.92  Aligned_cols=71  Identities=23%  Similarity=0.265  Sum_probs=52.5

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHH----cCCccEEEEccC
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAA----MGTMDGIIDTVS  256 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~----~~~~d~v~d~~g  256 (314)
                      +++|.|+ |.+|...++.+...|++++++.++.++.+++.++++...+ .|-.+++.+.++    .+.+|+++++.|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence            5888887 9999999999988999999999998877777666655433 344555443332    236899999865

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=96.33  E-value=0.023  Score=51.61  Aligned_cols=74  Identities=20%  Similarity=0.225  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC---cE---EecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA---DS---FLVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga---~~---~v~~~~~~~~~~~-------~~~~  248 (314)
                      ++.+++|.|+ |++|...++.+...|++|+++.++.++.+++.+++..   ..   ..|-.+.+.+.+.       .+.+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            4678999987 9999999998888999999999988877666665531   11   1244444433322       1359


Q ss_pred             cEEEEccC
Q 021300          249 DGIIDTVS  256 (314)
Q Consensus       249 d~v~d~~g  256 (314)
                      |++|+++|
T Consensus        85 D~li~nAg   92 (322)
T PRK07453         85 DALVCNAA   92 (322)
T ss_pred             cEEEECCc
Confidence            99999987

>PRK07890 short chain dehydrogenase; Provisional

Probab=96.33  E-value=0.027  Score=49.08  Aligned_cols=76  Identities=21%  Similarity=0.304  Sum_probs=53.5

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc---EEecCCCHHHHHHH-------cCC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~---~~v~~~~~~~~~~~-------~~~  247 (314)
                      -++.+++|.|+ |.+|...+..+...|++|+++.+++++.+.+.+++   +.+   ...|-.+++.+...       .+.
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            35688999997 99999999999999999999999887665655443   222   12344444333221       246


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|.+.|.
T Consensus        83 ~d~vi~~ag~   92 (258)
T PRK07890         83 VDALVNNAFR   92 (258)
T ss_pred             ccEEEECCcc
Confidence            8999999874

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.33  E-value=0.026  Score=49.89  Aligned_cols=76  Identities=17%  Similarity=0.265  Sum_probs=54.7

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC----Cc-EEecCCCHH-------HHHHHcCCc
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG----AD-SFLVSRDQD-------EMQAAMGTM  248 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g----a~-~~v~~~~~~-------~~~~~~~~~  248 (314)
                      ..|+.|||.|+ +++|.+.++-...+|+++++.+.+.+...+..++..    +. ...|-.+.+       .+++-.+.+
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V  115 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV  115 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence            57999999987 999988888777889999899888776666555443    32 333444443       333444579


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++++++|-
T Consensus       116 ~ILVNNAGI  124 (300)
T KOG1201|consen  116 DILVNNAGI  124 (300)
T ss_pred             eEEEecccc
Confidence            999999983

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.32  E-value=0.035  Score=50.82  Aligned_cols=107  Identities=21%  Similarity=0.286  Sum_probs=69.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc---
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~---  259 (314)
                      .|.++.|+|.|.+|...++.++.+|.+|+++.+.....  ..+.++...    .   .+.++....|+|+-++....   
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~~~~~----~---~l~ell~~aDiV~l~lP~t~~T~  219 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPE--AEKELGAEY----R---PLEELLRESDFVSLHVPLTKETY  219 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChh--hHHHcCCEe----c---CHHHHHhhCCEEEEeCCCChHHh
Confidence            68899999999999999999999999999888765432  223444421    1   12344556888888876332   


Q ss_pred             --cHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300          260 --PLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       260 --~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~  299 (314)
                        .-...+..|+++..++.++.. +.++-+...-.+++.+|.
T Consensus       220 ~~i~~~~~~~mk~ga~lIN~aRg-~~vd~~aL~~aL~~g~i~  260 (333)
T PRK13243        220 HMINEERLKLMKPTAILVNTARG-KVVDTKALVKALKEGWIA  260 (333)
T ss_pred             hccCHHHHhcCCCCeEEEECcCc-hhcCHHHHHHHHHcCCeE
Confidence              123567788888888888763 223333333333444444

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=96.32  E-value=0.027  Score=48.23  Aligned_cols=94  Identities=18%  Similarity=0.125  Sum_probs=60.3

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe---------cCCC-----HHHH---HH
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL---------VSRD-----QDEM---QA  243 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v---------~~~~-----~~~~---~~  243 (314)
                      +.++.+||+.|+|. |.-++.+|. .|.+|+.++.++...+.+.++.+.....         ....     .|..   ..
T Consensus        35 ~~~~~rvL~~gCG~-G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~~~  112 (218)
T PRK13255         35 LPAGSRVLVPLCGK-SLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALTAA  112 (218)
T ss_pred             CCCCCeEEEeCCCC-hHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCCcc
Confidence            45678999999874 777777775 6999999999998887765554432100         0000     0111   01


Q ss_pred             HcCCccEEEEccCC--------cccHHHHHHhhccCCEEEE
Q 021300          244 AMGTMDGIIDTVSA--------VHPLMPLIGLLKSQGKLVL  276 (314)
Q Consensus       244 ~~~~~d~v~d~~g~--------~~~~~~~~~~l~~~G~~v~  276 (314)
                      ..+.||.|+|...-        ...+..+.++|+++|++.+
T Consensus       113 ~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l  153 (218)
T PRK13255        113 DLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLL  153 (218)
T ss_pred             cCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEE
Confidence            12368999996631        1237788899999987544

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.32  E-value=0.036  Score=47.91  Aligned_cols=75  Identities=21%  Similarity=0.440  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcE---EecCCCHHHHH----HH---cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQ----AA---MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~---~v~~~~~~~~~----~~---~~~~  248 (314)
                      ++.++||.|+ |++|..+++.+...|++++++.++.++..++.++   .+.+.   ..|-.+++.+.    ..   .+.+
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4788999997 9999999999999999999999887665555433   24332   22333433322    22   2468


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |.+|.++|.
T Consensus        84 d~vi~~ag~   92 (253)
T PRK08217         84 NGLINNAGI   92 (253)
T ss_pred             CEEEECCCc
Confidence            999999873

>PRK06914 short chain dehydrogenase; Provisional

Probab=96.32  E-value=0.077  Score=46.88  Aligned_cols=74  Identities=19%  Similarity=0.277  Sum_probs=50.8

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCC--cE---EecCCCHHHHHH---H---cCCc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGA--DS---FLVSRDQDEMQA---A---MGTM  248 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga--~~---~v~~~~~~~~~~---~---~~~~  248 (314)
                      +.++||.|+ |.+|...+..+...|++|++++++++...++.+.   .+.  ..   ..|..+++.+..   .   .+++
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i   82 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI   82 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence            467899997 9999999999888999999999987765554332   221  11   224455443322   2   2468


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |+++.+.|.
T Consensus        83 d~vv~~ag~   91 (280)
T PRK06914         83 DLLVNNAGY   91 (280)
T ss_pred             eEEEECCcc
Confidence            999999874

>PRK07340 ornithine cyclodeaminase; Validated

Probab=96.32  E-value=0.026  Score=50.97  Aligned_cols=102  Identities=18%  Similarity=0.151  Sum_probs=72.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHH-CCC-eEEEEeCChhhHHHHHHHcCCc--EEecCCCHHHHHHHcCCccEEEEccCC
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~-~g~-~vi~v~~~~~~~~~~~~~~ga~--~~v~~~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      +...+++|+|+|..|...++.+.. .+. ++.+..+++++.+++++++...  .+. .   +...+....+|+|+.++.+
T Consensus       123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~---~~~~~av~~aDiVitaT~s  198 (304)
T PRK07340        123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P---LDGEAIPEAVDLVVTATTS  198 (304)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E---CCHHHHhhcCCEEEEccCC
Confidence            566889999999999998888864 565 7888999998888888877531  111 1   2223445689999999976


Q ss_pred             cccHHHHHHhhccCCEEEEEcCCC-CCcccchh
Q 021300          258 VHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAF  289 (314)
Q Consensus       258 ~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~  289 (314)
                      ...+-..  .+++|--++.+|... +..+++..
T Consensus       199 ~~Pl~~~--~~~~g~hi~~iGs~~p~~~El~~~  229 (304)
T PRK07340        199 RTPVYPE--AARAGRLVVAVGAFTPDMAELAPR  229 (304)
T ss_pred             CCceeCc--cCCCCCEEEecCCCCCCcccCCHH
Confidence            5433333  378888888889764 44566643

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=96.31  E-value=0.099  Score=44.78  Aligned_cols=114  Identities=12%  Similarity=-0.054  Sum_probs=68.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      -.+.+|||+|+|.++.-=+..+...|++|+++...-. +..++.+ .|.-..+ ....+  .....++++||-++++...
T Consensus        23 ~~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~-~~~i~~~-~r~~~--~~dl~g~~LViaATdD~~v   98 (223)
T PRK05562         23 SNKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKK-YGNLKLI-KGNYD--KEFIKDKHLIVIATDDEKL   98 (223)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHh-CCCEEEE-eCCCC--hHHhCCCcEEEECCCCHHH
Confidence            3577899999999998888888889999988876532 3334432 2321222 11111  1123579999999999874


Q ss_pred             HHHHHHhhccCCEEEEEcCCCCCcccchhhhhcC-ceeEe
Q 021300          261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMG-EEEDS  299 (314)
Q Consensus       261 ~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~  299 (314)
                      -.......+..+.++.+...+...+|-...+..+ .++|.
T Consensus        99 N~~I~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~Ia  138 (223)
T PRK05562         99 NNKIRKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFA  138 (223)
T ss_pred             HHHHHHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEE
Confidence            4444444455576666654444444544444443 45554

>PRK08219 short chain dehydrogenase; Provisional

Probab=96.30  E-value=0.092  Score=44.58  Aligned_cols=72  Identities=14%  Similarity=0.171  Sum_probs=50.7

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-CcE-EecCCCHHHHHHHcC---CccEEEEccCC
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADS-FLVSRDQDEMQAAMG---TMDGIIDTVSA  257 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-a~~-~v~~~~~~~~~~~~~---~~d~v~d~~g~  257 (314)
                      .++||.|+ |.+|...+..+... .+|+++.++.++..++.+... ... ..|-.+++.+.+...   +.|.+|.++|.
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~   81 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV   81 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence            57899987 99999888877777 999999998877666544432 222 124445555554433   69999999874

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=96.28  E-value=0.038  Score=48.21  Aligned_cols=75  Identities=20%  Similarity=0.341  Sum_probs=53.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHH-------cCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~-------~~~~d~v  251 (314)
                      .+.++||.|+ |.+|...++.+...|++|+++.++.++.+++.++++....   .|-.+++.+.++       .+.+|++
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3578999997 9999999999999999999999998877777666553211   233344332222       2468999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      +.+.|.
T Consensus        85 i~~ag~   90 (257)
T PRK07067         85 FNNAAL   90 (257)
T ss_pred             EECCCc
Confidence            998873

>PRK07069 short chain dehydrogenase; Validated

Probab=96.28  E-value=0.067  Score=46.27  Aligned_cols=95  Identities=17%  Similarity=0.243  Sum_probs=61.2

Q ss_pred             EEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC-hhhHHHHHHHcC----CcE----EecCCCHHHHHH-------HcCCcc
Q 021300          187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIERLG----ADS----FLVSRDQDEMQA-------AMGTMD  249 (314)
Q Consensus       187 vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~-~~~~~~~~~~~g----a~~----~v~~~~~~~~~~-------~~~~~d  249 (314)
                      ++|.|+ |.+|...++.+...|++|+++.++ .++.+++.+++.    ...    ..|-.+++.+.+       ..+++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            788887 999999999998899999999887 555545544432    111    124445443322       234689


Q ss_pred             EEEEccCCcc-------------------------cHHHHHHhhcc--CCEEEEEcCCC
Q 021300          250 GIIDTVSAVH-------------------------PLMPLIGLLKS--QGKLVLVGAPE  281 (314)
Q Consensus       250 ~v~d~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~G~~~  281 (314)
                      +++.+.|...                         ....+++.++.  .|+++.+++..
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~  140 (251)
T PRK07069         82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVA  140 (251)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChh
Confidence            9999987321                         12345555543  47899887753

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.28  E-value=0.055  Score=46.44  Aligned_cols=75  Identities=19%  Similarity=0.302  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      ++.++||.|+ |.+|...++.+...|.+|+++.+++++...+...   .+.+..   .|-.+++.+...       .+.+
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4578999998 9999999999988999999999987765444332   333222   244444332221       2468


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |.++.++|.
T Consensus        84 d~vi~~ag~   92 (246)
T PRK05653         84 DILVNNAGI   92 (246)
T ss_pred             CEEEECCCc
Confidence            999999864

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.28  E-value=0.024  Score=51.97  Aligned_cols=76  Identities=22%  Similarity=0.377  Sum_probs=49.8

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCh---------------------hhHH---HHHHHcCCc----EEec
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP---------------------SKKS---EAIERLGAD----SFLV  234 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~---------------------~~~~---~~~~~~ga~----~~v~  234 (314)
                      ..+|+|+|+|++|..++..+...|. ++++++++.                     .+.+   +.++++..+    .+..
T Consensus        24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~~  103 (338)
T PRK12475         24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVVT  103 (338)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEec
Confidence            4679999999999999999999998 677776653                     1111   122233221    1211


Q ss_pred             CCCHHHHHHHcCCccEEEEccCCcc
Q 021300          235 SRDQDEMQAAMGTMDGIIDTVSAVH  259 (314)
Q Consensus       235 ~~~~~~~~~~~~~~d~v~d~~g~~~  259 (314)
                      .-.++.+.++..++|+|+|++.+..
T Consensus       104 ~~~~~~~~~~~~~~DlVid~~D~~~  128 (338)
T PRK12475        104 DVTVEELEELVKEVDLIIDATDNFD  128 (338)
T ss_pred             cCCHHHHHHHhcCCCEEEEcCCCHH
Confidence            2223455666678999999998765

>PRK04457 spermidine synthase; Provisional

Probab=96.27  E-value=0.085  Score=46.56  Aligned_cols=95  Identities=17%  Similarity=0.190  Sum_probs=64.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCC----c--EEecCCCHHHHHHHcCCccEEEEc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGA----D--SFLVSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga----~--~~v~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      .++.+||++|+|. |..+..+++.. +.++++++.+++-.+.+.+.++.    +  .++..+..+.+....+.+|+|+-.
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~Da~~~l~~~~~~yD~I~~D  143 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEADGAEYIAVHRHSTDVILVD  143 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECCHHHHHHhCCCCCCEEEEe
Confidence            4567899999865 77777887776 56899999998877655555542    1  233333345555555679998732


Q ss_pred             c--CC--------cccHHHHHHhhccCCEEEEE
Q 021300          255 V--SA--------VHPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       255 ~--g~--------~~~~~~~~~~l~~~G~~v~~  277 (314)
                      .  +.        ...+..+.+.|+++|+++.-
T Consensus       144 ~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin  176 (262)
T PRK04457        144 GFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN  176 (262)
T ss_pred             CCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence            2  11        23477888999999999874

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.27  E-value=0.096  Score=45.29  Aligned_cols=75  Identities=20%  Similarity=0.324  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCChhhHHHHHHH---cCCcEE---ecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v-~~~~~~~~~~~~~---~ga~~~---v~~~~~~~~~~~-------~~~  247 (314)
                      ++.++||.|+ |.+|...+..+...|++++++ .++.++.+++.++   .+....   .|-.+++.+..+       .+.
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 999999999999999998764 5665554444332   343222   233444433222       246


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|.+.|.
T Consensus        83 id~vi~~ag~   92 (250)
T PRK08063         83 LDVFVNNAAS   92 (250)
T ss_pred             CCEEEECCCC
Confidence            8999999873

>PRK12937 short chain dehydrogenase; Provisional

Probab=96.26  E-value=0.14  Score=44.02  Aligned_cols=99  Identities=16%  Similarity=0.227  Sum_probs=62.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhh-HHHHHH---HcCCcEE---ecCCCHHHHHHH-------cC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIE---RLGADSF---LVSRDQDEMQAA-------MG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~-~~~~~~---~~ga~~~---v~~~~~~~~~~~-------~~  246 (314)
                      .++.++||.|+ |.+|...++.+...|++++++.++... ..++.+   +.+....   .|-.+++.+.+.       .+
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG   82 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            35678999987 999999999999999998877665332 222222   2343211   233444333222       24


Q ss_pred             CccEEEEccCCcc-------------------------cHHHHHHhhccCCEEEEEcCC
Q 021300          247 TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       247 ~~d~v~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      ++|++|.+.|...                         .+..+++.++.+|+++.++..
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~  141 (245)
T PRK12937         83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTS  141 (245)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeec
Confidence            7999999987421                         122344555667899999764

>PRK05650 short chain dehydrogenase; Provisional

Probab=96.26  E-value=0.078  Score=46.63  Aligned_cols=72  Identities=24%  Similarity=0.377  Sum_probs=49.6

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHH-------HcCCccEE
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQA-------AMGTMDGI  251 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~-------~~~~~d~v  251 (314)
                      ++||.|+ |.+|...++.+...|++|++++++.++.+++.+.+   +.+..   .|-.+++.+.+       ..+++|++
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l   81 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI   81 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6889987 99999999988889999999999887665554332   33321   23333332222       22479999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      |.+.|.
T Consensus        82 I~~ag~   87 (270)
T PRK05650         82 VNNAGV   87 (270)
T ss_pred             EECCCC
Confidence            999884

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=96.25  E-value=0.028  Score=51.33  Aligned_cols=102  Identities=18%  Similarity=0.241  Sum_probs=69.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHH-HCCC-eEEEEeCChhhHHHHHHHc----CCcEEecCCCHHHHHHHcCCccEEEEcc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAK-AMGV-KVTVISTSPSKKSEAIERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~-~~g~-~vi~v~~~~~~~~~~~~~~----ga~~~v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      +...+++|+|+|..+.+.+..+. ..+. ++.++.+++++.+++++++    |.+. ....+   +.+....+|+|+.++
T Consensus       127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v-~~~~~---~~~av~~aDiVvtaT  202 (326)
T TIGR02992       127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDV-TAATD---PRAAMSGADIIVTTT  202 (326)
T ss_pred             CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceE-EEeCC---HHHHhccCCEEEEec
Confidence            45678999999999988888776 4675 7889999998888877765    4322 22222   234446799999999


Q ss_pred             CCcccHHHHHHhhccCCEEEEEcCCC-CCcccch
Q 021300          256 SAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPA  288 (314)
Q Consensus       256 g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~  288 (314)
                      ++... --..+.++++-.+..+|... .+.+++.
T Consensus       203 ~s~~p-~i~~~~l~~g~~i~~vg~~~p~~rEld~  235 (326)
T TIGR02992       203 PSETP-ILHAEWLEPGQHVTAMGSDAEHKNEIDP  235 (326)
T ss_pred             CCCCc-EecHHHcCCCcEEEeeCCCCCCceecCH
Confidence            76531 11234678877788888653 3445554

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.24  E-value=0.039  Score=49.13  Aligned_cols=100  Identities=24%  Similarity=0.261  Sum_probs=69.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-EEe-------cCCCHHHHH----HH---c
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFL-------VSRDQDEMQ----AA---M  245 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~-~~v-------~~~~~~~~~----~~---~  245 (314)
                      ++--+++|.|+ .++|++.+..++..|+.|.++.++.++.+++.++++-. .+.       |-.+.+.+.    ++   .
T Consensus        31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~  110 (331)
T KOG1210|consen   31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE  110 (331)
T ss_pred             CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc
Confidence            55577888865 99999999999999999999999999999998888732 211       112222222    22   2


Q ss_pred             CCccEEEEccCCc-------------------------ccHHHHHHhhcc---CCEEEEEcCCC
Q 021300          246 GTMDGIIDTVSAV-------------------------HPLMPLIGLLKS---QGKLVLVGAPE  281 (314)
Q Consensus       246 ~~~d~v~d~~g~~-------------------------~~~~~~~~~l~~---~G~~v~~G~~~  281 (314)
                      ..+|.+|.|.|..                         .+....+..|+.   .|+++++++..
T Consensus       111 ~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~  174 (331)
T KOG1210|consen  111 GPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQL  174 (331)
T ss_pred             CCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhh
Confidence            4689999999843                         123344555543   35999998753

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=96.23  E-value=0.089  Score=45.57  Aligned_cols=73  Identities=21%  Similarity=0.264  Sum_probs=50.7

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHH-------HHHcCCccE
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEM-------QAAMGTMDG  250 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~-------~~~~~~~d~  250 (314)
                      .++||.|+ |.+|...+..+...|++|+++++++++.+.+.+.+   +...   ..|-.+++.+       .+..++.|+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   81 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI   81 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            57899997 99999999998888999999999887665554432   3221   1244555422       222346899


Q ss_pred             EEEccCC
Q 021300          251 IIDTVSA  257 (314)
Q Consensus       251 v~d~~g~  257 (314)
                      +|.+.+.
T Consensus        82 vi~~a~~   88 (255)
T TIGR01963        82 LVNNAGI   88 (255)
T ss_pred             EEECCCC
Confidence            9998864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=96.23  E-value=0.067  Score=43.14  Aligned_cols=73  Identities=23%  Similarity=0.351  Sum_probs=47.4

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCC-eEEEEeCC--hhhHHHHHHHc---CCcEEe---cCCCHHHHH-------HHcCC
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTS--PSKKSEAIERL---GADSFL---VSRDQDEMQ-------AAMGT  247 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~-~vi~v~~~--~~~~~~~~~~~---ga~~~v---~~~~~~~~~-------~~~~~  247 (314)
                      +++||.|+ +++|...++.+...|+ +++++.++  .++..++.+++   +....+   |-.+++.++       +..+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            36889997 9999999988888876 66677777  45555554433   432222   333443222       22347


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|.+.|.
T Consensus        81 ld~li~~ag~   90 (167)
T PF00106_consen   81 LDILINNAGI   90 (167)
T ss_dssp             ESEEEEECSC
T ss_pred             cccccccccc
Confidence            9999999884

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=96.22  E-value=0.06  Score=45.78  Aligned_cols=114  Identities=17%  Similarity=0.056  Sum_probs=75.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh-hhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~-~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      -.|.+|||+|+|.+|.-=+.++...|++++++.... ++...+.++.+.+.+ . ..  .-.+....+++||-++++...
T Consensus        10 l~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~-~-~~--~~~~~~~~~~lviaAt~d~~l   85 (210)
T COG1648          10 LEGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWI-E-RE--FDAEDLDDAFLVIAATDDEEL   85 (210)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchh-h-cc--cChhhhcCceEEEEeCCCHHH
Confidence            357789999999999998999999999999988776 455555544442221 1 11  111222349999999999876


Q ss_pred             HHHHHHhhccCCEEEEEcCCCCCcccchhh-hhcCceeEe
Q 021300          261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFS-LLMGEEEDS  299 (314)
Q Consensus       261 ~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~-~~~~~~~i~  299 (314)
                      -.......++.+.++.+...+...++-+-. +-...+.|.
T Consensus        86 n~~i~~~a~~~~i~vNv~D~p~~~~f~~Pa~~~r~~l~ia  125 (210)
T COG1648          86 NERIAKAARERRILVNVVDDPELCDFIFPAIVDRGPLQIA  125 (210)
T ss_pred             HHHHHHHHHHhCCceeccCCcccCceecceeeccCCeEEE
Confidence            666777777888888887655544444433 333444443

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.22  E-value=0.038  Score=48.26  Aligned_cols=74  Identities=20%  Similarity=0.260  Sum_probs=52.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--c--E-EecCCCHHHHHHH-------cCCccE
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--D--S-FLVSRDQDEMQAA-------MGTMDG  250 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~--~-~v~~~~~~~~~~~-------~~~~d~  250 (314)
                      +.++||.|+ |.+|...+..+...|+++++++++.++..++.+++..  +  . ..|-.+++.+.+.       .+.+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            357999987 9999999999998999999999998877666655432  1  1 1244444433332       235899


Q ss_pred             EEEccCC
Q 021300          251 IIDTVSA  257 (314)
Q Consensus       251 v~d~~g~  257 (314)
                      ++.++|.
T Consensus        82 lv~~ag~   88 (257)
T PRK07024         82 VIANAGI   88 (257)
T ss_pred             EEECCCc
Confidence            9999873

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=96.18  E-value=0.088  Score=48.78  Aligned_cols=76  Identities=12%  Similarity=0.133  Sum_probs=47.1

Q ss_pred             CCCCEEEEEcC-ChHHHH--HHHHHHHCCCeEEEEeCCh---h------------hHHHHHHHcCCcEE-e--cCCCHHH
Q 021300          182 KPGMHVGVVGL-GGLGHV--AVKFAKAMGVKVTVISTSP---S------------KKSEAIERLGADSF-L--VSRDQDE  240 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~--a~~~a~~~g~~vi~v~~~~---~------------~~~~~~~~~ga~~~-v--~~~~~~~  240 (314)
                      ..|.++||.|+ +++|++  .++.+ ..|++++++....   +            ...+++++.|.... +  |-.+++.
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            44678899987 899999  45555 7899988877322   1            12344556675422 2  3333322


Q ss_pred             -------HHHHcCCccEEEEccCCc
Q 021300          241 -------MQAAMGTMDGIIDTVSAV  258 (314)
Q Consensus       241 -------~~~~~~~~d~v~d~~g~~  258 (314)
                             +.+..+++|+++++++..
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccC
Confidence                   222235799999998755

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.18  E-value=0.038  Score=44.83  Aligned_cols=96  Identities=21%  Similarity=0.314  Sum_probs=61.7

Q ss_pred             cccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 021300          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (314)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~  240 (314)
                      ..+|++..+.+..++....--.|.+++|+|. ..+|.-...+++..|++|++.-...+..++                  
T Consensus        14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~------------------   75 (160)
T PF02882_consen   14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE------------------   75 (160)
T ss_dssp             SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH------------------
T ss_pred             CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc------------------
Confidence            4567777777777877665578999999997 789999999999999999876555433332                  


Q ss_pred             HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCC
Q 021300          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       241 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                         ....+|+|+-++|.+..+  --+.++++..++.+|..
T Consensus        76 ---~~~~ADIVVsa~G~~~~i--~~~~ik~gavVIDvG~~  110 (160)
T PF02882_consen   76 ---ITRRADIVVSAVGKPNLI--KADWIKPGAVVIDVGIN  110 (160)
T ss_dssp             ---HHTTSSEEEE-SSSTT-B---GGGS-TTEEEEE--CE
T ss_pred             ---eeeeccEEeeeecccccc--ccccccCCcEEEecCCc
Confidence               334578888888876532  23467888888888864

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=96.18  E-value=0.046  Score=49.69  Aligned_cols=108  Identities=22%  Similarity=0.275  Sum_probs=71.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccC-Cccc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVS-AVHP  260 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g-~~~~  260 (314)
                      -.|.++-|+|.|.+|.+.++.++.+|++++...+.+.  .+..+.+++.++      + +.++....|++.-+.. +..+
T Consensus       144 l~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~--~~~~~~~~~~y~------~-l~ell~~sDii~l~~Plt~~T  214 (324)
T COG1052         144 LRGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN--PEAEKELGARYV------D-LDELLAESDIISLHCPLTPET  214 (324)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC--hHHHhhcCceec------c-HHHHHHhCCEEEEeCCCChHH
Confidence            4589999999999999999999999999999998864  334345555543      1 3455566788766554 2221


Q ss_pred             ----HHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300          261 ----LMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       261 ----~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~  299 (314)
                          -...+..|++++.+|-+|.- +-++-...--.+++.+|.
T Consensus       215 ~hLin~~~l~~mk~ga~lVNtaRG-~~VDe~ALi~AL~~g~i~  256 (324)
T COG1052         215 RHLINAEELAKMKPGAILVNTARG-GLVDEQALIDALKSGKIA  256 (324)
T ss_pred             hhhcCHHHHHhCCCCeEEEECCCc-cccCHHHHHHHHHhCCcc
Confidence                24467788888888888773 223333333333444444

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.18  E-value=0.066  Score=46.04  Aligned_cols=71  Identities=23%  Similarity=0.405  Sum_probs=55.2

Q ss_pred             EEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhh-HHHHHHHcCCcEE-ecCCCHHHHHHHcCCccEEEEccCC
Q 021300          187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       187 vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~-~~~~~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      |+|+|+ |.+|...++.+...+.+|.+++|++.. .....+..|++.+ .|..+++.+.+...++|.||.+++.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~   74 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPP   74 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence            689998 999999999999988999999998642 2233356788644 3566778888888899999999983

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.17  E-value=0.043  Score=49.08  Aligned_cols=95  Identities=18%  Similarity=0.199  Sum_probs=70.9

Q ss_pred             ccchhhhhhhhhhHhcCCCCCCCEEEEEc-CChHHHHHHHHHHHCCCeEEEEe-CChhhHHHHHHHcCCcEEecCCCHHH
Q 021300          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAIERLGADSFLVSRDQDE  240 (314)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~G-ag~vG~~a~~~a~~~g~~vi~v~-~~~~~~~~~~~~~ga~~~v~~~~~~~  240 (314)
                      .+||+..+.+..|+....--.|.+|+|+| .+.+|.-.+.++...|++|++.. ++. .                     
T Consensus       137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~-~---------------------  194 (296)
T PRK14188        137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR-D---------------------  194 (296)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC-C---------------------
Confidence            46777777777777665446899999999 59999999999999999998874 332 1                     


Q ss_pred             HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       241 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      +.+.....|+|+-++|....+...+  +++|..++.+|...
T Consensus       195 l~e~~~~ADIVIsavg~~~~v~~~~--lk~GavVIDvGin~  233 (296)
T PRK14188        195 LPAVCRRADILVAAVGRPEMVKGDW--IKPGATVIDVGINR  233 (296)
T ss_pred             HHHHHhcCCEEEEecCChhhcchhe--ecCCCEEEEcCCcc
Confidence            1234455889999999876444433  88999999998753

>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain

Probab=96.17  E-value=0.089  Score=42.21  Aligned_cols=98  Identities=20%  Similarity=0.339  Sum_probs=62.2

Q ss_pred             EEEEEcCChHHHHHHHHHHHC-CCeEEEEeC--ChhhHHHHHH---HcCC---cE---------------EecCCCHHHH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVIST--SPSKKSEAIE---RLGA---DS---------------FLVSRDQDEM  241 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~--~~~~~~~~~~---~~ga---~~---------------~v~~~~~~~~  241 (314)
                      +|.|+|.|.+|...++.+... +.+++++..  +++....+.+   ..|.   +.               ++..++|..+
T Consensus         2 kv~I~G~GriGr~v~~~~~~~~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~~   81 (149)
T smart00846        2 KVGINGFGRIGRLVLRALLERPDIEVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPANL   81 (149)
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCEEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHHC
Confidence            578899999999888887754 567776554  3333344433   1121   10               1112334444


Q ss_pred             HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC
Q 021300          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP  283 (314)
Q Consensus       242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~  283 (314)
                      .+..-++|+|+||+|.-.....+...+..|-+-|+++.+..+
T Consensus        82 ~w~~~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap~~~  123 (149)
T smart00846       82 PWKELGVDIVVECTGKFTTREKASAHLKAGAKKVIISAPAKD  123 (149)
T ss_pred             cccccCCeEEEeccccccchHHHHHHHHcCCCEEEeCCCCCC
Confidence            444457999999999755566677888888788888877543

GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.

>PRK05855 short chain dehydrogenase; Validated

Probab=96.14  E-value=0.067  Score=52.35  Aligned_cols=76  Identities=22%  Similarity=0.241  Sum_probs=53.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcE---EecCCCHHHHHHH-------cCC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~---~v~~~~~~~~~~~-------~~~  247 (314)
                      -.+.++||.|+ |++|...++.+...|++|+++.++.++.+++.+.   .|.+.   -.|-.+++.+.++       .+.
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  392 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV  392 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            34678999987 9999999999998999999999988766555443   24322   1344554433322       246


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus       393 id~lv~~Ag~  402 (582)
T PRK05855        393 PDIVVNNAGI  402 (582)
T ss_pred             CcEEEECCcc
Confidence            9999999984

>PRK14982 acyl-ACP reductase; Provisional

Probab=96.14  E-value=0.048  Score=49.82  Aligned_cols=94  Identities=20%  Similarity=0.265  Sum_probs=66.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHH-CCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~-~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~  258 (314)
                      -.+.+|+|+|+ |.+|..+++.+.. .|. +++++.++.++..++.++++...+      ..+.+....+|+|+.+++..
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i------~~l~~~l~~aDiVv~~ts~~  226 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI------LSLEEALPEADIVVWVASMP  226 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH------HhHHHHHccCCEEEECCcCC
Confidence            57789999998 9999998888864 464 888888888887777776652221      12334556799999998875


Q ss_pred             ccHHHHHHhhccCCEEEEEcCCC
Q 021300          259 HPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       259 ~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      .....-...+++.-.+++++.|.
T Consensus       227 ~~~~I~~~~l~~~~~viDiAvPR  249 (340)
T PRK14982        227 KGVEIDPETLKKPCLMIDGGYPK  249 (340)
T ss_pred             cCCcCCHHHhCCCeEEEEecCCC
Confidence            43212224557778888888874

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=96.13  E-value=0.088  Score=49.28  Aligned_cols=100  Identities=19%  Similarity=0.240  Sum_probs=64.9

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHH------HHHHHc-CCcEE-ecCCCHHHHHHHcC----C
Q 021300          181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS------EAIERL-GADSF-LVSRDQDEMQAAMG----T  247 (314)
Q Consensus       181 ~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~------~~~~~~-ga~~~-v~~~~~~~~~~~~~----~  247 (314)
                      -..+.+|||.|+ |.+|..+++.+...|.+|++++++.....      +..+.. +...+ .|..+++.+.+...    +
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~  136 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP  136 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence            367789999998 99999999999889999999998764321      111122 23322 35556665555433    6


Q ss_pred             ccEEEEccCCcc------------cHHHHHHhhccC--CEEEEEcCC
Q 021300          248 MDGIIDTVSAVH------------PLMPLIGLLKSQ--GKLVLVGAP  280 (314)
Q Consensus       248 ~d~v~d~~g~~~------------~~~~~~~~l~~~--G~~v~~G~~  280 (314)
                      +|+||+|.+...            ....+++.++..  +++|.++..
T Consensus       137 ~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~  183 (390)
T PLN02657        137 VDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI  183 (390)
T ss_pred             CcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence            999999886421            122344544443  478888764

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=96.13  E-value=0.037  Score=49.22  Aligned_cols=117  Identities=15%  Similarity=0.200  Sum_probs=78.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CC---cEEecCCCHH----HHHHHcC--C
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GA---DSFLVSRDQD----EMQAAMG--T  247 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----ga---~~~v~~~~~~----~~~~~~~--~  247 (314)
                      +-|++.+|.|+ .++|.+-+.-+..+|.+++++.|+.+++++..++.    ++   ..++|...++    .+++...  .
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~  126 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD  126 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence            56788899998 88997666555558999999999999987776655    32   1234544433    3333333  3


Q ss_pred             ccEEEEccCCcc---------------------------cHHHHHHhh--ccCCEEEEEcCCCCCcccchhhhhcCceeE
Q 021300          248 MDGIIDTVSAVH---------------------------PLMPLIGLL--KSQGKLVLVGAPEKPLELPAFSLLMGEEED  298 (314)
Q Consensus       248 ~d~v~d~~g~~~---------------------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i  298 (314)
                      +-+.++++|-..                           ..+..+..|  +..|.++.+|+..+-.++|....+.-.+..
T Consensus       127 VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~  206 (312)
T KOG1014|consen  127 VGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAF  206 (312)
T ss_pred             eEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHH
Confidence            566888887321                           111222223  467999999998888888888877766553

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=96.12  E-value=0.068  Score=49.07  Aligned_cols=75  Identities=21%  Similarity=0.252  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC----CcE-EecCCCHHHHHHHcC--CccEEEEc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG----ADS-FLVSRDQDEMQAAMG--TMDGIIDT  254 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g----a~~-~v~~~~~~~~~~~~~--~~d~v~d~  254 (314)
                      .|.++||.|+ |.+|...++.+...|.+|+++.+.........+.++    ... ..|-.+.+.+.++..  ++|+||++
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~   82 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL   82 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence            4688999997 999999999999999999998877654333322222    111 124445555555433  57999999


Q ss_pred             cCC
Q 021300          255 VSA  257 (314)
Q Consensus       255 ~g~  257 (314)
                      ++.
T Consensus        83 A~~   85 (349)
T TIGR02622        83 AAQ   85 (349)
T ss_pred             Ccc
Confidence            873

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK06483 dihydromonapterin reductase; Provisional

Probab=96.11  E-value=0.047  Score=46.91  Aligned_cols=74  Identities=15%  Similarity=0.129  Sum_probs=51.0

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHH----HH---cCCccEEEEc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQ----AA---MGTMDGIIDT  254 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~----~~---~~~~d~v~d~  254 (314)
                      +.++||.|+ +++|...++.+...|++|+++.+++++..+..+..++..+ .|-.+++.+.    +.   .+++|+++.+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~   81 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN   81 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence            457899987 9999999999988999999999887654444445554322 2434443322    22   2469999999


Q ss_pred             cCC
Q 021300          255 VSA  257 (314)
Q Consensus       255 ~g~  257 (314)
                      .|.
T Consensus        82 ag~   84 (236)
T PRK06483         82 ASD   84 (236)
T ss_pred             Ccc
Confidence            874

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=96.09  E-value=0.11  Score=45.31  Aligned_cols=73  Identities=27%  Similarity=0.330  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcE---EecCCCHHHHH----HH---cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQ----AA---MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~---~v~~~~~~~~~----~~---~~~~  248 (314)
                      .+.++||.|+ |++|...++.+...|++|+++.+++. ..++.++   .+.+.   ..|-.+++.+.    ++   .+.+
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI   85 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999987 99999999999989999999888753 2233333   24332   12444443222    22   2469


Q ss_pred             cEEEEccC
Q 021300          249 DGIIDTVS  256 (314)
Q Consensus       249 d~v~d~~g  256 (314)
                      |+++.++|
T Consensus        86 d~lv~nAg   93 (260)
T PRK12823         86 DVLINNVG   93 (260)
T ss_pred             eEEEECCc
Confidence            99999987

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.09  E-value=0.05  Score=47.32  Aligned_cols=74  Identities=20%  Similarity=0.311  Sum_probs=51.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE-Ee--cCCCHHHHHHH-------cCCcc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS-FL--VSRDQDEMQAA-------MGTMD  249 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~-~v--~~~~~~~~~~~-------~~~~d  249 (314)
                      |.++||.|+ |++|...++.+...|++|+++.++.++.+++.+++   +.+. ++  |-.+++.+.++       .+.+|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            467899987 99999999999999999999998877665554433   2221 22  44444333222       24689


Q ss_pred             EEEEccCC
Q 021300          250 GIIDTVSA  257 (314)
Q Consensus       250 ~v~d~~g~  257 (314)
                      +++++.|.
T Consensus        81 ~lI~~ag~   88 (252)
T PRK07677         81 ALINNAAG   88 (252)
T ss_pred             EEEECCCC
Confidence            99999873

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.09  E-value=0.038  Score=47.57  Aligned_cols=75  Identities=21%  Similarity=0.362  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.+++|.|+ |.+|...+..+...|++|+++.+++++..++.+++   +....   .|-.+++.+.+.       .+.+
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI   85 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence            3578999987 99999999988889999999999877655544333   32221   233444433222       2479


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|.+.|.
T Consensus        86 d~vi~~ag~   94 (239)
T PRK07666         86 DILINNAGI   94 (239)
T ss_pred             cEEEEcCcc
Confidence            999999874

>PRK08589 short chain dehydrogenase; Validated

Probab=96.07  E-value=0.048  Score=48.15  Aligned_cols=74  Identities=15%  Similarity=0.330  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHH-------HcCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQA-------AMGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~-------~~~~~  248 (314)
                      .+.++||.|+ +++|...++.+...|++|+++.++ ++..++.+++   +.+.   ..|-.+++.+.+       ..+.+
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   83 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV   83 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            4678999997 999999999988899999999988 5544444433   3221   234444433322       22468


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|++.|.
T Consensus        84 d~li~~Ag~   92 (272)
T PRK08589         84 DVLFNNAGV   92 (272)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK06125 short chain dehydrogenase; Provisional

Probab=96.06  E-value=0.044  Score=47.87  Aligned_cols=75  Identities=20%  Similarity=0.326  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCcE-E--ecCCCHHHHHHH---cCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADS-F--LVSRDQDEMQAA---MGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----ga~~-~--v~~~~~~~~~~~---~~~~d~v  251 (314)
                      .+.++||.|+ +++|...++.+...|++|+++.+++++.+++.+++    +.+. +  .|-.+++.+.++   .+.+|++
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l   85 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL   85 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence            4688999987 99999999999889999999999887665554433    3221 1  244444443332   3479999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      |.+.|.
T Consensus        86 v~~ag~   91 (259)
T PRK06125         86 VNNAGA   91 (259)
T ss_pred             EECCCC
Confidence            999873

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=96.04  E-value=0.16  Score=43.89  Aligned_cols=74  Identities=23%  Similarity=0.281  Sum_probs=47.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-ChhhHHHHHH---HcCCcEE---ecCCCHHHHHH-------HcCCc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIE---RLGADSF---LVSRDQDEMQA-------AMGTM  248 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~-~~~~~~~~~~---~~ga~~~---v~~~~~~~~~~-------~~~~~  248 (314)
                      +.++||.|+ |.+|...++.+...|+++++..+ ...+..+..+   ..+.+..   .|-.+.+.+.+       ..+++
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   82 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEI   82 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            567899987 99999999999999999887543 3333333322   2344332   34444433222       22479


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |+++.+.|.
T Consensus        83 d~li~~ag~   91 (246)
T PRK12938         83 DVLVNNAGI   91 (246)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.04  E-value=0.061  Score=49.12  Aligned_cols=105  Identities=19%  Similarity=0.237  Sum_probs=67.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc---
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~---  259 (314)
                      .|.+|.|+|.|.+|...++.++.+|.+|+++++.+......     ..    ..  +.+.++....|+|+.+.....   
T Consensus       145 ~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~-----~~----~~--~~l~ell~~aDiVil~lP~t~~t~  213 (330)
T PRK12480        145 KNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDF-----LT----YK--DSVKEAIKDADIISLHVPANKESY  213 (330)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhh-----hh----cc--CCHHHHHhcCCEEEEeCCCcHHHH
Confidence            67889999999999999999999999999998876432211     00    00  123345567888888876442   


Q ss_pred             --cHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300          260 --PLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       260 --~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~  299 (314)
                        .....+..|+++..+|.++.. .-++-+...-.++..++.
T Consensus       214 ~li~~~~l~~mk~gavlIN~aRG-~~vd~~aL~~aL~~g~i~  254 (330)
T PRK12480        214 HLFDKAMFDHVKKGAILVNAARG-AVINTPDLIAAVNDGTLL  254 (330)
T ss_pred             HHHhHHHHhcCCCCcEEEEcCCc-cccCHHHHHHHHHcCCee
Confidence              123456778888888888763 223333333333444443

>PRK12743 oxidoreductase; Provisional

Probab=96.04  E-value=0.16  Score=44.24  Aligned_cols=74  Identities=18%  Similarity=0.220  Sum_probs=48.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC-hhhHHHHH---HHcCCcEE---ecCCCHHHHHH-------HcCCc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAI---ERLGADSF---LVSRDQDEMQA-------AMGTM  248 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~-~~~~~~~~---~~~ga~~~---v~~~~~~~~~~-------~~~~~  248 (314)
                      +.++||.|+ +.+|..+++.+...|++|+++.+. .+..+++.   +..+.+..   .|-.+++.+..       ..+.+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            468999987 999999999999999999887654 33333332   23453321   34444433222       22468


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|.+.|.
T Consensus        82 d~li~~ag~   90 (256)
T PRK12743         82 DVLVNNAGA   90 (256)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.03  E-value=0.074  Score=51.20  Aligned_cols=72  Identities=25%  Similarity=0.281  Sum_probs=50.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhh----HHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCC
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK----KSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~----~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      ..+.+++|+|+|.+|+.++.+++..|.+|++++..+..    ..+..++.|.+....... .    ....+|+|+.+.|.
T Consensus        14 ~~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~-~----~~~~~D~Vv~s~Gi   88 (480)
T PRK01438         14 WQGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGP-T----LPEDTDLVVTSPGW   88 (480)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc-c----ccCCCCEEEECCCc
Confidence            45789999999999999999999999999988865431    123345567655433222 1    23468999988885


Q ss_pred             c
Q 021300          258 V  258 (314)
Q Consensus       258 ~  258 (314)
                      .
T Consensus        89 ~   89 (480)
T PRK01438         89 R   89 (480)
T ss_pred             C
Confidence            3

>PRK05875 short chain dehydrogenase; Provisional

Probab=96.03  E-value=0.057  Score=47.61  Aligned_cols=75  Identities=21%  Similarity=0.345  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-----Cc-EE--ecCCCHHHHHHH-------cC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-----AD-SF--LVSRDQDEMQAA-------MG  246 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-----a~-~~--v~~~~~~~~~~~-------~~  246 (314)
                      ++.++||.|+ |.+|...++.+...|++|+++.+++++.+...+++.     .+ .+  .|-.+++.+.+.       .+
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG   85 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999997 999999999999999999999988766554444331     11 11  233444333222       23


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      .+|++|.+.|.
T Consensus        86 ~~d~li~~ag~   96 (276)
T PRK05875         86 RLHGVVHCAGG   96 (276)
T ss_pred             CCCEEEECCCc
Confidence            68999999873

>PRK07774 short chain dehydrogenase; Provisional

Probab=96.03  E-value=0.052  Score=46.99  Aligned_cols=75  Identities=20%  Similarity=0.314  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc---EEecCCCHHHHHH-------HcCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQA-------AMGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~---~~v~~~~~~~~~~-------~~~~~  248 (314)
                      .+.++||.|+ |.+|...++.+...|++++++.++++...++.+++   +..   ...|-.+.+.+..       ..+++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999998 99999999999889999999999876554444332   221   1234444433222       22469


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|.++|.
T Consensus        85 d~vi~~ag~   93 (250)
T PRK07774         85 DYLVNNAAI   93 (250)
T ss_pred             CEEEECCCC
Confidence            999999884

>PRK06138 short chain dehydrogenase; Provisional

Probab=96.03  E-value=0.056  Score=46.80  Aligned_cols=75  Identities=17%  Similarity=0.284  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc--CCcE-E--ecCCCHHHHHHH-------cCCcc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--GADS-F--LVSRDQDEMQAA-------MGTMD  249 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~--ga~~-~--v~~~~~~~~~~~-------~~~~d  249 (314)
                      ++.++||.|+ |.+|...++.+...|++++++.++.++..+..+++  +... .  .|-.+++.+.+.       .+++|
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   83 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD   83 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4678999987 99999999988888999999999877665554443  3221 1  244444433332       24799


Q ss_pred             EEEEccCC
Q 021300          250 GIIDTVSA  257 (314)
Q Consensus       250 ~v~d~~g~  257 (314)
                      +++.+.|.
T Consensus        84 ~vi~~ag~   91 (252)
T PRK06138         84 VLVNNAGF   91 (252)
T ss_pred             EEEECCCC
Confidence            99999884

>PRK12746 short chain dehydrogenase; Provisional

Probab=96.02  E-value=0.086  Score=45.77  Aligned_cols=75  Identities=16%  Similarity=0.211  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCChhhHHHHHHHc---CCcE---EecCCCHHHHHH----Hc-----
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIERL---GADS---FLVSRDQDEMQA----AM-----  245 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v-~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~----~~-----  245 (314)
                      .+.+++|.|+ |.+|...++.+...|+++++. .++.++.+++.+++   +...   ..|-.+++.+.+    ..     
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   84 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI   84 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence            3578999997 999999999988889988775 56665544444333   2221   124445443222    11     


Q ss_pred             ----CCccEEEEccCC
Q 021300          246 ----GTMDGIIDTVSA  257 (314)
Q Consensus       246 ----~~~d~v~d~~g~  257 (314)
                          ..+|++|.+.|.
T Consensus        85 ~~~~~~id~vi~~ag~  100 (254)
T PRK12746         85 RVGTSEIDILVNNAGI  100 (254)
T ss_pred             ccCCCCccEEEECCCC
Confidence                258999999874

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.01  E-value=0.16  Score=43.63  Aligned_cols=75  Identities=20%  Similarity=0.324  Sum_probs=48.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhh-HHHHHH---HcCCcEEe---cCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIE---RLGADSFL---VSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~-~~~~~~---~~ga~~~v---~~~~~~~~~~~-------~~~  247 (314)
                      .+.++||.|+ |.+|...+..+...|++|+++.+++.. .....+   ..+.+..+   |-.+++.+.+.       ..+
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4568999997 999999999999899999888776543 222222   22332221   44444433222       136


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|.++.++|.
T Consensus        84 id~vi~~ag~   93 (248)
T PRK05557         84 VDILVNNAGI   93 (248)
T ss_pred             CCEEEECCCc
Confidence            8999999874

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.01  E-value=0.078  Score=46.93  Aligned_cols=95  Identities=16%  Similarity=0.216  Sum_probs=71.1

Q ss_pred             ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (314)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~  241 (314)
                      ..||+..+....++....--.|.+++|+|. ..+|.-...++...|++|++..+....                     +
T Consensus       131 ~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~---------------------L  189 (279)
T PRK14178        131 FAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTEN---------------------L  189 (279)
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhH---------------------H
Confidence            467777777777777664468999999997 699999999999999998877654322                     2


Q ss_pred             HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCC
Q 021300          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      .+....+|+++-++|.+..+.  -+.+++|..++.+|..
T Consensus       190 ~~~~~~ADIvI~Avgk~~lv~--~~~vk~GavVIDVgi~  226 (279)
T PRK14178        190 KAELRQADILVSAAGKAGFIT--PDMVKPGATVIDVGIN  226 (279)
T ss_pred             HHHHhhCCEEEECCCcccccC--HHHcCCCcEEEEeecc
Confidence            344456899999998665333  3347999999999975

>PRK06436 glycerate dehydrogenase; Provisional

Probab=96.00  E-value=0.05  Score=49.05  Aligned_cols=86  Identities=20%  Similarity=0.288  Sum_probs=59.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc-
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-  260 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~-  260 (314)
                      -.|.++.|+|.|.+|...+++++.+|.+|+++.+....       .+....  ..   .+.++....|+|+.+...... 
T Consensus       120 L~gktvgIiG~G~IG~~vA~~l~afG~~V~~~~r~~~~-------~~~~~~--~~---~l~ell~~aDiv~~~lp~t~~T  187 (303)
T PRK06436        120 LYNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVN-------DGISSI--YM---EPEDIMKKSDFVLISLPLTDET  187 (303)
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcc-------cCcccc--cC---CHHHHHhhCCEEEECCCCCchh
Confidence            46899999999999999999999999999999876321       122211  11   233445567888887764321 


Q ss_pred             ----HHHHHHhhccCCEEEEEcC
Q 021300          261 ----LMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       261 ----~~~~~~~l~~~G~~v~~G~  279 (314)
                          -...+..|+++..+|.+|.
T Consensus       188 ~~li~~~~l~~mk~ga~lIN~sR  210 (303)
T PRK06436        188 RGMINSKMLSLFRKGLAIINVAR  210 (303)
T ss_pred             hcCcCHHHHhcCCCCeEEEECCC
Confidence                2446777888888887766

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=96.00  E-value=0.036  Score=55.73  Aligned_cols=107  Identities=21%  Similarity=0.225  Sum_probs=68.3

Q ss_pred             cceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhcCC--CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEe
Q 021300          138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL--DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS  214 (314)
Q Consensus       138 ~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~--~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~  214 (314)
                      ...|..+++.-.+.+ +..+.|++=.            +....  .-.+.++||.|+ |++|...++.+...|++|+++.
T Consensus       379 ~~~~~~~~~~~~f~~-eyw~~e~~kl------------~~~~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~  445 (676)
T TIGR02632       379 VSEYVSLPEQEAFDI-EYWPLEEAKL------------RRMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLAD  445 (676)
T ss_pred             ccceecCchhhccch-hhhhhhHHhh------------ccCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEe
Confidence            355666666666666 5555555421            11111  124789999987 9999999999988999999999


Q ss_pred             CChhhHHHHHHHc----CCc----EEecCCCHHHHHHH-------cCCccEEEEccCC
Q 021300          215 TSPSKKSEAIERL----GAD----SFLVSRDQDEMQAA-------MGTMDGIIDTVSA  257 (314)
Q Consensus       215 ~~~~~~~~~~~~~----ga~----~~v~~~~~~~~~~~-------~~~~d~v~d~~g~  257 (314)
                      ++.+..+++.+++    +..    ...|-.+++.+.+.       .+++|++|.++|.
T Consensus       446 r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~  503 (676)
T TIGR02632       446 LNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGI  503 (676)
T ss_pred             CCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence            9877665554433    321    11244444433332       2479999999984

>PRK06398 aldose dehydrogenase; Validated

Probab=96.00  E-value=0.077  Score=46.43  Aligned_cols=69  Identities=16%  Similarity=0.207  Sum_probs=47.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-EEecCCCHHHHHHH-------cCCccEEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID  253 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~-~~v~~~~~~~~~~~-------~~~~d~v~d  253 (314)
                      .|.++||.|+ +++|...+..+...|++|+++.++..+..      ... ...|-.+++.+.++       .+.+|++|+
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~   78 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN------DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN   78 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC------ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4678999997 99999999999999999999888754321      111 11244444333222       246999999


Q ss_pred             ccCC
Q 021300          254 TVSA  257 (314)
Q Consensus       254 ~~g~  257 (314)
                      +.|.
T Consensus        79 ~Ag~   82 (258)
T PRK06398         79 NAGI   82 (258)
T ss_pred             CCCC
Confidence            8873

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.99  E-value=0.04  Score=44.88  Aligned_cols=87  Identities=23%  Similarity=0.326  Sum_probs=54.3

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHHHH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLI  265 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~  265 (314)
                      +|-++|.|.+|...++-+...|.+++++.+++++.+++.+. |+..+  ....+    +....|+||-++.+.......+
T Consensus         3 ~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~-g~~~~--~s~~e----~~~~~dvvi~~v~~~~~v~~v~   75 (163)
T PF03446_consen    3 KIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEA-GAEVA--DSPAE----AAEQADVVILCVPDDDAVEAVL   75 (163)
T ss_dssp             EEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHT-TEEEE--SSHHH----HHHHBSEEEE-SSSHHHHHHHH
T ss_pred             EEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHh-hhhhh--hhhhh----HhhcccceEeecccchhhhhhh
Confidence            67889999999999999999999999999999888777544 64332  11122    2233578887777644344433


Q ss_pred             H------hhccCCEEEEEcC
Q 021300          266 G------LLKSQGKLVLVGA  279 (314)
Q Consensus       266 ~------~l~~~G~~v~~G~  279 (314)
                      .      .++++..++.++.
T Consensus        76 ~~~~i~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   76 FGENILAGLRPGKIIIDMST   95 (163)
T ss_dssp             HCTTHGGGS-TTEEEEE-SS
T ss_pred             hhhHHhhccccceEEEecCC
Confidence            3      3344455555544

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK07402 precorrin-6B methylase; Provisional

Probab=95.99  E-value=0.19  Score=42.06  Aligned_cols=100  Identities=16%  Similarity=0.158  Sum_probs=60.8

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHH---HcCCcE--EecCCCHHHHHHHcCCccEEEE
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIE---RLGADS--FLVSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~---~~ga~~--~v~~~~~~~~~~~~~~~d~v~d  253 (314)
                      .++++++||=+|+|. |..++.+++.. +.+++.++.+++..+.+.+   +++.+.  ++..+..+.+......+|.++-
T Consensus        37 ~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~d~v~~  115 (196)
T PRK07402         37 RLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAPDRVCI  115 (196)
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCCCEEEE
Confidence            467888888788743 55566666654 5799999999877655533   345432  2222222333333334455443


Q ss_pred             ccCC--cccHHHHHHhhccCCEEEEEcCC
Q 021300          254 TVSA--VHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       254 ~~g~--~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      ..+.  ...+..+.+.|+++|+++.....
T Consensus       116 ~~~~~~~~~l~~~~~~LkpgG~li~~~~~  144 (196)
T PRK07402        116 EGGRPIKEILQAVWQYLKPGGRLVATASS  144 (196)
T ss_pred             ECCcCHHHHHHHHHHhcCCCeEEEEEeec
Confidence            3222  23477888899999999888653

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=95.99  E-value=0.057  Score=47.18  Aligned_cols=72  Identities=19%  Similarity=0.289  Sum_probs=50.3

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE--EecCCCHHHHHHH-------cCCccEEE
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS--FLVSRDQDEMQAA-------MGTMDGII  252 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~--~v~~~~~~~~~~~-------~~~~d~v~  252 (314)
                      ++||.|+ +++|...++.+...|++|+++.+++++.+++.+++   +...  ..|-.+++.+.++       .+.+|++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            6889987 99999999999889999999999887665554443   2111  1244444333222       24799999


Q ss_pred             EccCC
Q 021300          253 DTVSA  257 (314)
Q Consensus       253 d~~g~  257 (314)
                      .+.|.
T Consensus        82 ~naG~   86 (259)
T PRK08340         82 WNAGN   86 (259)
T ss_pred             ECCCC
Confidence            99874

>PRK06179 short chain dehydrogenase; Provisional

Probab=95.98  E-value=0.074  Score=46.72  Aligned_cols=71  Identities=23%  Similarity=0.320  Sum_probs=49.1

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE-EecCCCHHHHHHH-------cCCccEEEEc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAA-------MGTMDGIIDT  254 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~-~v~~~~~~~~~~~-------~~~~d~v~d~  254 (314)
                      +.+++|.|+ |.+|...++.+...|++|++++++.++....   .+... ..|-.+++.+.++       .+.+|++|.+
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~   80 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN   80 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            467899987 9999999999888999999999886543221   13322 2344555433332       2468999999


Q ss_pred             cCC
Q 021300          255 VSA  257 (314)
Q Consensus       255 ~g~  257 (314)
                      .|.
T Consensus        81 ag~   83 (270)
T PRK06179         81 AGV   83 (270)
T ss_pred             CCC
Confidence            984

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.98  E-value=0.18  Score=43.53  Aligned_cols=99  Identities=15%  Similarity=0.159  Sum_probs=61.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh-hhHHHH---HHHcCCcE-E--ecCCCHHHHHH-------HcCCc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEA---IERLGADS-F--LVSRDQDEMQA-------AMGTM  248 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~-~~~~~~---~~~~ga~~-~--v~~~~~~~~~~-------~~~~~  248 (314)
                      +.++||.|+ |.+|...++.+...|+++++..+.. ++....   .++.+.+. +  .|-.+++.+..       ..+.+
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVA   85 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence            578999987 9999999998888999987776543 222222   22333321 1  24444432222       12478


Q ss_pred             cEEEEccCCcc-------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300          249 DGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       249 d~v~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      |.+|.+.|...                         ..+.+.+.++..|+++.+++..+
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~  144 (252)
T PRK06077         86 DILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG  144 (252)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence            99999998310                         12234555667789999987543

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=95.98  E-value=0.024  Score=43.74  Aligned_cols=91  Identities=16%  Similarity=0.181  Sum_probs=57.7

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeCChh-hHHHHHHHcC----C-cEEecCCCHHHHHHHcCCccEEEEccCC
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPS-KKSEAIERLG----A-DSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~-g~~vi~v~~~~~-~~~~~~~~~g----a-~~~v~~~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      +|.|+|+ |-+|...++++..+ ..+++.+..++. ....+...++    . +..+...+.+.    ...+|+||.|+++
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Dvvf~a~~~   76 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEE----LSDVDVVFLALPH   76 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHH----HTTESEEEE-SCH
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhH----hhcCCEEEecCch
Confidence            5889997 99999999999976 446555554443 3333333332    2 22222222222    2789999999998


Q ss_pred             cccHHHHHHhhccCCEEEEEcCC
Q 021300          258 VHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       258 ~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      ....+..-.+++++-+++.++..
T Consensus        77 ~~~~~~~~~~~~~g~~ViD~s~~   99 (121)
T PF01118_consen   77 GASKELAPKLLKAGIKVIDLSGD   99 (121)
T ss_dssp             HHHHHHHHHHHHTTSEEEESSST
T ss_pred             hHHHHHHHHHhhCCcEEEeCCHH
Confidence            76555555666788889988664

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=95.98  E-value=0.064  Score=47.39  Aligned_cols=74  Identities=22%  Similarity=0.342  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.+++|.|+ |++|...++.+...|++|+++.++.+..+++.+++   +.+.   ..|-.+++.+..+       .+.+
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC   88 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999987 99999999999999999999999877665554443   3321   1233444332221       2479


Q ss_pred             cEEEEccC
Q 021300          249 DGIIDTVS  256 (314)
Q Consensus       249 d~v~d~~g  256 (314)
                      |++|.++|
T Consensus        89 d~li~~ag   96 (278)
T PRK08277         89 DILINGAG   96 (278)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK08643 acetoin reductase; Validated

Probab=95.97  E-value=0.049  Score=47.43  Aligned_cols=74  Identities=20%  Similarity=0.355  Sum_probs=51.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHH-------HcCCcc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQA-------AMGTMD  249 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~-------~~~~~d  249 (314)
                      +.++||.|+ |.+|...++.+...|++|+++.++.++.+++.+++   +.+..   .|-.+++.+.+       ..+++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            468899987 99999999999999999999999877665554443   22221   24444433222       224799


Q ss_pred             EEEEccCC
Q 021300          250 GIIDTVSA  257 (314)
Q Consensus       250 ~v~d~~g~  257 (314)
                      ++|.+.|.
T Consensus        82 ~vi~~ag~   89 (256)
T PRK08643         82 VVVNNAGV   89 (256)
T ss_pred             EEEECCCC
Confidence            99999874

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=95.97  E-value=0.058  Score=49.07  Aligned_cols=95  Identities=17%  Similarity=0.238  Sum_probs=63.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHCC----CeEEEEeCC--hhhHHHHHHHcCC--------------------c--EEecCCC
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMG----VKVTVISTS--PSKKSEAIERLGA--------------------D--SFLVSRD  237 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g----~~vi~v~~~--~~~~~~~~~~~ga--------------------~--~~v~~~~  237 (314)
                      +|.|.|.|.+|..+.+.+...+    ..++.+...  .+....+. +++.                    +  .+...++
T Consensus         1 ~IaInGfGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll-~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~   79 (325)
T TIGR01532         1 RVAINGFGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLL-RYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT   79 (325)
T ss_pred             CEEEECCCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHH-hhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence            4778999999999999887653    566665542  22222332 2221                    1  1122233


Q ss_pred             HHHHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          238 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       238 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      ++.+.+...++|+||+|+|.......+...++.|++.|+++.+.
T Consensus        80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP~  123 (325)
T TIGR01532        80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHPG  123 (325)
T ss_pred             hhhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCCC
Confidence            44444444589999999998877888899999999999998874

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=95.96  E-value=0.12  Score=47.85  Aligned_cols=92  Identities=13%  Similarity=0.325  Sum_probs=66.8

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHC--CCeEEEEe--CChhhHHHHHHHcCCcEEecCCCH--HHHH---------------
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAM--GVKVTVIS--TSPSKKSEAIERLGADSFLVSRDQ--DEMQ---------------  242 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~--g~~vi~v~--~~~~~~~~~~~~~ga~~~v~~~~~--~~~~---------------  242 (314)
                      .+|.|+|+ |++|..++...+..  ..+++.++  ++.++..+.+++|+.+.++..++.  ..++               
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~   81 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE   81 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence            46899997 99999999998876  45777765  566678888899998766554432  1111               


Q ss_pred             ---HHc--CCccEEEEccCCcccHHHHHHhhccCCEEEE
Q 021300          243 ---AAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVL  276 (314)
Q Consensus       243 ---~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~  276 (314)
                         ++.  ..+|+|+.++++...+...+.+++.|-++.+
T Consensus        82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL  120 (385)
T PRK05447         82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL  120 (385)
T ss_pred             HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence               111  1489999999877678888888877766555

>PRK14967 putative methyltransferase; Provisional

Probab=95.95  E-value=0.16  Score=43.63  Aligned_cols=95  Identities=27%  Similarity=0.253  Sum_probs=61.2

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHH---HcCCcEEecCCCHHHHHHH-cCCccEEEEcc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIE---RLGADSFLVSRDQDEMQAA-MGTMDGIIDTV  255 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~---~~ga~~~v~~~~~~~~~~~-~~~~d~v~d~~  255 (314)
                      ++++++||-+|+|. |..+..+++. ++ +++.++.++.....+.+   ..+.+..+...+.  .... .+.||+|+.+.
T Consensus        34 ~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~--~~~~~~~~fD~Vi~np  109 (223)
T PRK14967         34 LGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDW--ARAVEFRPFDVVVSNP  109 (223)
T ss_pred             cCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECch--hhhccCCCeeEEEECC
Confidence            67889999999987 8888888875 55 89999998876543322   2343322222222  1112 34799999763


Q ss_pred             CCc---------------------------ccHHHHHHhhccCCEEEEEcC
Q 021300          256 SAV---------------------------HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       256 g~~---------------------------~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      +-.                           ..+..+.+.|+++|+++++-.
T Consensus       110 Py~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~~  160 (223)
T PRK14967        110 PYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQS  160 (223)
T ss_pred             CCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence            211                           123457789999999998744

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=95.94  E-value=0.066  Score=48.71  Aligned_cols=98  Identities=14%  Similarity=0.158  Sum_probs=64.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHHcCC---cE-EecCCCHHHHHHHcCCccEEEEcc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERLGA---DS-FLVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~~~ga---~~-~v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      .|.++||.|+ |.+|...++.+...|  .+|++++++..+...+.+.+..   .. ..|-.+++.+.+...++|+||.++
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A   82 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA   82 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence            3678999987 999999888877765  5888887776554444444432   11 125566666666667899999988


Q ss_pred             CCcc-----------------cHHHHHHhhccC--CEEEEEcCC
Q 021300          256 SAVH-----------------PLMPLIGLLKSQ--GKLVLVGAP  280 (314)
Q Consensus       256 g~~~-----------------~~~~~~~~l~~~--G~~v~~G~~  280 (314)
                      |...                 ....+++.+.+.  ++++.++..
T Consensus        83 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~  126 (324)
T TIGR03589        83 ALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTD  126 (324)
T ss_pred             ccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            7421                 122344445443  588888764

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=95.94  E-value=0.051  Score=46.94  Aligned_cols=75  Identities=23%  Similarity=0.324  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcE---EecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~---~v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.++||.|+ |.+|...+..+...|++|++++++.++...+.+.   .+.+.   ..|-.+++.+.+.       .+.+
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL   84 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4578999997 9999999998888899999999986654444332   23221   1244444433332       2368


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |.+|.+.|.
T Consensus        85 d~vi~~ag~   93 (251)
T PRK12826         85 DILVANAGI   93 (251)
T ss_pred             CEEEECCCC
Confidence            999999864

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.92  E-value=0.069  Score=45.94  Aligned_cols=74  Identities=12%  Similarity=0.200  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcEE---ecCCCHHHHHH-------HcC-C
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSF---LVSRDQDEMQA-------AMG-T  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~~---v~~~~~~~~~~-------~~~-~  247 (314)
                      .|.+++|.|+ +++|.+.+..+...|++|+++.++.++.+++.++   .+.+..   .|..+++.+.+       ..+ .
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA   83 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999987 9999999999998999999999988776665443   343321   24444433322       224 6


Q ss_pred             ccEEEEccC
Q 021300          248 MDGIIDTVS  256 (314)
Q Consensus       248 ~d~v~d~~g  256 (314)
                      +|++|.+.|
T Consensus        84 iD~li~nag   92 (227)
T PRK08862         84 PDVLVNNWT   92 (227)
T ss_pred             CCEEEECCc
Confidence            999999986

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=95.91  E-value=0.058  Score=49.56  Aligned_cols=86  Identities=14%  Similarity=0.045  Sum_probs=57.2

Q ss_pred             hhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHH----HHHHcCC------cEE-ecCCC
Q 021300          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSE----AIERLGA------DSF-LVSRD  237 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~----~~~~~ga------~~~-v~~~~  237 (314)
                      |||.-++... ...+.+|||.|+ |-+|...+..+...|.+|+++++.......    +.+..+.      ..+ .|-.+
T Consensus         2 ~~~~~~~~~~-~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d   80 (348)
T PRK15181          2 TAYEELRTKL-VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK   80 (348)
T ss_pred             chhhhhhhcc-cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCC
Confidence            5666665544 466689999997 999999999999999999999875432211    1111111      111 13344


Q ss_pred             HHHHHHHcCCccEEEEccC
Q 021300          238 QDEMQAAMGTMDGIIDTVS  256 (314)
Q Consensus       238 ~~~~~~~~~~~d~v~d~~g  256 (314)
                      .+.+.++..++|+||.+++
T Consensus        81 ~~~l~~~~~~~d~ViHlAa   99 (348)
T PRK15181         81 FTDCQKACKNVDYVLHQAA   99 (348)
T ss_pred             HHHHHHHhhCCCEEEECcc
Confidence            5555666668999999886

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.90  E-value=0.073  Score=46.21  Aligned_cols=75  Identities=20%  Similarity=0.253  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcE---EecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~---~v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.+++|.|+ |.+|...++.+...|++|+++.+++++..++.+.   .+.+.   ..|-.+.+.+..+       .+.+
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   85 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL   85 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            4688999997 9999999998888999999999987765444333   33321   1233444332222       2468


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |+++.+.|.
T Consensus        86 d~li~~ag~   94 (253)
T PRK06172         86 DYAFNNAGI   94 (253)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK07035 short chain dehydrogenase; Provisional

Probab=95.88  E-value=0.077  Score=46.04  Aligned_cols=75  Identities=19%  Similarity=0.293  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHH----HH---cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQ----AA---MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~----~~---~~~~  248 (314)
                      .+.++||.|+ |.+|...++.+...|++|+++.++.++.+.+.+++   +...   -.|..+.+.+.    +.   .+.+
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   86 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL   86 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999987 99999999999999999999999877665555443   3221   12444443322    22   2468


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |+++.+.|.
T Consensus        87 d~li~~ag~   95 (252)
T PRK07035         87 DILVNNAAA   95 (252)
T ss_pred             CEEEECCCc
Confidence            999998873

>PRK07856 short chain dehydrogenase; Provisional

Probab=95.88  E-value=0.16  Score=44.04  Aligned_cols=70  Identities=24%  Similarity=0.284  Sum_probs=48.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--cE-EecCCCHHHHHHH-------cCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DS-FLVSRDQDEMQAA-------MGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~~-~v~~~~~~~~~~~-------~~~~d~v  251 (314)
                      .+.++||.|+ |++|...++.+...|++++++.++.++     +..+.  .. ..|-.+++.+.+.       .+.+|++
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   79 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4788999987 999999999999899999999888654     11222  21 2344444333322       2468999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      |.+.|.
T Consensus        80 i~~ag~   85 (252)
T PRK07856         80 VNNAGG   85 (252)
T ss_pred             EECCCC
Confidence            999873

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=95.87  E-value=0.11  Score=44.18  Aligned_cols=120  Identities=19%  Similarity=0.283  Sum_probs=79.0

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC----C-cEEecCCCH-------HHHHHH---cCC
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG----A-DSFLVSRDQ-------DEMQAA---MGT  247 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g----a-~~~v~~~~~-------~~~~~~---~~~  247 (314)
                      |.++++.|+ |++|+.....+...|+.+.++..+.+..+..+ +|.    . ..++..-|.       +..++.   .+.
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a-kL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~   83 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA-KLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT   83 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH-HHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence            788988875 99999998888889999988888877654443 333    2 223322221       222222   346


Q ss_pred             ccEEEEccCCc-----------------ccHHHHHHhhc-----cCCEEEEEcCCCCCcccchhhhhcCcee-Eeeeccc
Q 021300          248 MDGIIDTVSAV-----------------HPLMPLIGLLK-----SQGKLVLVGAPEKPLELPAFSLLMGEEE-DSWWQHD  304 (314)
Q Consensus       248 ~d~v~d~~g~~-----------------~~~~~~~~~l~-----~~G~~v~~G~~~~~~~~~~~~~~~~~~~-i~~~~~~  304 (314)
                      .|++++..|-.                 .+...+++.+.     ++|.+|-+++-.+-.+.|...++.-.++ +..+.++
T Consensus        84 iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTRS  163 (261)
T KOG4169|consen   84 IDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTRS  163 (261)
T ss_pred             eEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeeehh
Confidence            89999987721                 23445556553     5789999998777777777777777776 4443444

>PRK06720 hypothetical protein; Provisional

Probab=95.86  E-value=0.1  Score=42.85  Aligned_cols=75  Identities=20%  Similarity=0.275  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHH-------HcCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQA-------AMGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~-------~~~~~  248 (314)
                      .|.+++|.|+ +++|...+..+...|++++++.++.+..++..+++   +.+.   -.|..+.+.+.+       ..+.+
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i   94 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI   94 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4678899987 88999999988888999999998876554443333   4332   123334332222       22469


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++++++|.
T Consensus        95 DilVnnAG~  103 (169)
T PRK06720         95 DMLFQNAGL  103 (169)
T ss_pred             CEEEECCCc
Confidence            999999884

>PLN02214 cinnamoyl-CoA reductase

Probab=95.86  E-value=0.12  Score=47.28  Aligned_cols=98  Identities=21%  Similarity=0.273  Sum_probs=63.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHH-HHHHHcC---Cc-EE--ecCCCHHHHHHHcCCccEEEE
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS-EAIERLG---AD-SF--LVSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~-~~~~~~g---a~-~~--v~~~~~~~~~~~~~~~d~v~d  253 (314)
                      ..+.+|||.|+ |.+|...+..+...|.+|++++++.+... ...+.+.   .. .+  .|-.+++.+.+...++|+||.
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   87 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH   87 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence            45678999998 99999999999989999999988765321 1112221   11 11  234455666666678999999


Q ss_pred             ccCCcc------------cHHHHHHhhccCC--EEEEEcC
Q 021300          254 TVSAVH------------PLMPLIGLLKSQG--KLVLVGA  279 (314)
Q Consensus       254 ~~g~~~------------~~~~~~~~l~~~G--~~v~~G~  279 (314)
                      +++...            ....+++.+++.|  +++.+++
T Consensus        88 ~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS  127 (342)
T PLN02214         88 TASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSS  127 (342)
T ss_pred             ecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecc
Confidence            987321            1233455554443  7887765

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=95.86  E-value=0.08  Score=46.18  Aligned_cols=75  Identities=23%  Similarity=0.330  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.++||.|+ |.+|...++.+...|++|++++++.++.+.+.+.+   +...   ..|-.+++.+.+.       .+.+
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i   90 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV   90 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5688999997 99999999999889999999999877655554332   3221   2244554443221       2468


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |.+|.++|.
T Consensus        91 d~vi~~ag~   99 (259)
T PRK08213         91 DILVNNAGA   99 (259)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=95.85  E-value=0.094  Score=47.76  Aligned_cols=89  Identities=18%  Similarity=0.213  Sum_probs=60.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHH-HCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc-
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-  259 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~-~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~-  259 (314)
                      -.|.++.|+|.|.+|...++.++ .+|.+|+...+....  +....++...    .   .+.++....|+|.-+..-.. 
T Consensus       143 L~gktvGIiG~G~IG~~va~~l~~~fgm~V~~~~~~~~~--~~~~~~~~~~----~---~l~ell~~sDvv~lh~plt~~  213 (323)
T PRK15409        143 VHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHK--EAEERFNARY----C---DLDTLLQESDFVCIILPLTDE  213 (323)
T ss_pred             CCCCEEEEEcccHHHHHHHHHHHhcCCCEEEEECCCCch--hhHHhcCcEe----c---CHHHHHHhCCEEEEeCCCChH
Confidence            36799999999999999999998 899999887765321  2223444421    1   23345556788777665221 


Q ss_pred             ----cHHHHHHhhccCCEEEEEcC
Q 021300          260 ----PLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       260 ----~~~~~~~~l~~~G~~v~~G~  279 (314)
                          .-...+..|+++..+|.++.
T Consensus       214 T~~li~~~~l~~mk~ga~lIN~aR  237 (323)
T PRK15409        214 THHLFGAEQFAKMKSSAIFINAGR  237 (323)
T ss_pred             HhhccCHHHHhcCCCCeEEEECCC
Confidence                12347778888888888876

>PRK07074 short chain dehydrogenase; Provisional

Probab=95.85  E-value=0.065  Score=46.66  Aligned_cols=74  Identities=22%  Similarity=0.269  Sum_probs=53.1

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC---cE-EecCCCHHHHHHH-------cCCccEE
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA---DS-FLVSRDQDEMQAA-------MGTMDGI  251 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga---~~-~v~~~~~~~~~~~-------~~~~d~v  251 (314)
                      +.++||.|+ |.+|...+..+...|++++++.+++++.+++.+++..   .. -.|-.+.+.+...       .+++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            457999998 9999999998888899999999988877666665432   11 2344555443322       1368999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      +.+.|.
T Consensus        82 i~~ag~   87 (257)
T PRK07074         82 VANAGA   87 (257)
T ss_pred             EECCCC
Confidence            999974

>PRK08317 hypothetical protein; Provisional

Probab=95.85  E-value=0.064  Score=45.97  Aligned_cols=100  Identities=26%  Similarity=0.345  Sum_probs=63.2

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHHc---CCcEEecCCCHHHHHHHcCCccEEEE
Q 021300          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERL---GADSFLVSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       179 ~~~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~~~---ga~~~v~~~~~~~~~~~~~~~d~v~d  253 (314)
                      ..+.++++||-+|+|. |..+..+++..+  .+++.++.++.....+.+..   +...-+...+........+.||+|+-
T Consensus        15 ~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~   93 (241)
T PRK08317         15 LAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFDAVRS   93 (241)
T ss_pred             cCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCCCCCCCceEEEE
Confidence            3478899999999976 888888888763  58999998887665553331   11111111111111112346888775


Q ss_pred             ccC-----C-cccHHHHHHhhccCCEEEEEcC
Q 021300          254 TVS-----A-VHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       254 ~~g-----~-~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      ...     + ...+..+.++|+++|.++....
T Consensus        94 ~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  125 (241)
T PRK08317         94 DRVLQHLEDPARALAEIARVLRPGGRVVVLDT  125 (241)
T ss_pred             echhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence            321     1 2357788999999999988753

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=95.84  E-value=0.069  Score=49.58  Aligned_cols=74  Identities=9%  Similarity=0.107  Sum_probs=50.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHHcCCccEEEEccC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVS  256 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~g  256 (314)
                      ..+.+|||.|+ |.+|...+..+...|.+|+++++........ ..++...+ .|-.+.+.+.+...++|+||++++
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa   94 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSE-DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA   94 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccc-ccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence            46689999998 9999999999999999999988754321111 01122211 244445555555568999999985

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.84  E-value=0.087  Score=45.53  Aligned_cols=75  Identities=20%  Similarity=0.283  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcCCcEE---ecCCCHHHHH----HH---cCCccE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADSF---LVSRDQDEMQ----AA---MGTMDG  250 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~~~~~ga~~~---v~~~~~~~~~----~~---~~~~d~  250 (314)
                      .|.++||.|+ |.+|...+..+...|++|+++.++.. +..+..++.+.+..   .|-.+++.+.    +.   .+.+|+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   83 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4788999997 99999999999999999999888653 22233344443221   2334443322    22   246999


Q ss_pred             EEEccCC
Q 021300          251 IIDTVSA  257 (314)
Q Consensus       251 v~d~~g~  257 (314)
                      ++.+.|.
T Consensus        84 li~~ag~   90 (248)
T TIGR01832        84 LVNNAGI   90 (248)
T ss_pred             EEECCCC
Confidence            9999874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.84  E-value=0.075  Score=47.20  Aligned_cols=96  Identities=16%  Similarity=0.239  Sum_probs=71.8

Q ss_pred             ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (314)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~  241 (314)
                      .+||+..+....++....--.|.++.|+|. +.+|.-.+.++...|++|++.-....                     .+
T Consensus       137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~---------------------~l  195 (284)
T PRK14179        137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTR---------------------NL  195 (284)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCC---------------------CH
Confidence            457777777777776664468999999997 99999999999999999987622111                     12


Q ss_pred             HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      .+....+|+|+-++|....+...  .+++|-.++.+|...
T Consensus       196 ~~~~~~ADIVI~avg~~~~v~~~--~ik~GavVIDvgin~  233 (284)
T PRK14179        196 AEVARKADILVVAIGRGHFVTKE--FVKEGAVVIDVGMNR  233 (284)
T ss_pred             HHHHhhCCEEEEecCccccCCHH--HccCCcEEEEeccee
Confidence            33455689999999988755554  489999999998753

>PRK06482 short chain dehydrogenase; Provisional

Probab=95.83  E-value=0.083  Score=46.61  Aligned_cols=73  Identities=19%  Similarity=0.254  Sum_probs=52.3

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE---EecCCCHHHHHHH-------cCCccEEEE
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGIID  253 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~---~v~~~~~~~~~~~-------~~~~d~v~d  253 (314)
                      .++||.|+ |.+|...++.+...|.+|+++.+++++.+++.+..+...   ..|-.+.+.+.+.       .+++|++|.
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS   82 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46899987 999999999888899999999999877766655544321   1344444333221       246899999


Q ss_pred             ccCC
Q 021300          254 TVSA  257 (314)
Q Consensus       254 ~~g~  257 (314)
                      ++|.
T Consensus        83 ~ag~   86 (276)
T PRK06482         83 NAGY   86 (276)
T ss_pred             CCCC
Confidence            9874

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=95.83  E-value=0.2  Score=38.12  Aligned_cols=90  Identities=22%  Similarity=0.317  Sum_probs=60.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHC--CCeEE-EEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAM--GVKVT-VISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM  262 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~--g~~vi-~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~  262 (314)
                      ++.|+|.|..|......++..  +.+++ ++++++++.+.+.++++... +  .+.+.+.+ ...+|+|+-++.......
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~~-~--~~~~~ll~-~~~~D~V~I~tp~~~h~~   77 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIPV-Y--TDLEELLA-DEDVDAVIIATPPSSHAE   77 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSEE-E--SSHHHHHH-HTTESEEEEESSGGGHHH
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhcccc-h--hHHHHHHH-hhcCCEEEEecCCcchHH
Confidence            578999999998888666655  44666 44566667777788889873 2  33222211 137999999998876566


Q ss_pred             HHHHhhccCCEEEEEcCC
Q 021300          263 PLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       263 ~~~~~l~~~G~~v~~G~~  280 (314)
                      .+..+++.|- -+++-.|
T Consensus        78 ~~~~~l~~g~-~v~~EKP   94 (120)
T PF01408_consen   78 IAKKALEAGK-HVLVEKP   94 (120)
T ss_dssp             HHHHHHHTTS-EEEEESS
T ss_pred             HHHHHHHcCC-EEEEEcC
Confidence            6777776555 5666443

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=95.82  E-value=0.06  Score=43.49  Aligned_cols=90  Identities=21%  Similarity=0.222  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc---
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~---  259 (314)
                      .+.+|.|+|-|.-|.+.++-+|..|.+|++..+...+..+.+++-|.+..       .+.+...+.|+|+-.+.+..   
T Consensus         3 ~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~-------~~~eAv~~aDvV~~L~PD~~q~~   75 (165)
T PF07991_consen    3 KGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVM-------SVAEAVKKADVVMLLLPDEVQPE   75 (165)
T ss_dssp             CTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECC-------EHHHHHHC-SEEEE-S-HHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeec-------cHHHHHhhCCEEEEeCChHHHHH
Confidence            47899999999999999999999999999999988766677788887532       23344556999998887653   


Q ss_pred             cH-HHHHHhhccCCEEEEEcC
Q 021300          260 PL-MPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       260 ~~-~~~~~~l~~~G~~v~~G~  279 (314)
                      .. ......|+++-.+++...
T Consensus        76 vy~~~I~p~l~~G~~L~fahG   96 (165)
T PF07991_consen   76 VYEEEIAPNLKPGATLVFAHG   96 (165)
T ss_dssp             HHHHHHHHHS-TT-EEEESSS
T ss_pred             HHHHHHHhhCCCCCEEEeCCc
Confidence            12 334456777777666544

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PRK07904 short chain dehydrogenase; Provisional

Probab=95.81  E-value=0.057  Score=47.18  Aligned_cols=77  Identities=17%  Similarity=0.215  Sum_probs=51.0

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeCChhh-HHHHHHHc---CC-c-EE--ecCCCHHH----HHHHc-
Q 021300          181 DKPGMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSK-KSEAIERL---GA-D-SF--LVSRDQDE----MQAAM-  245 (314)
Q Consensus       181 ~~~g~~vlI~Ga-g~vG~~a~~~a~~~-g~~vi~v~~~~~~-~~~~~~~~---ga-~-~~--v~~~~~~~----~~~~~-  245 (314)
                      +..+.++||.|+ |++|...++.+... |++|+++.+++++ .+++.+++   +. + .+  .|-.+++.    +.++. 
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   84 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA   84 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence            467789999998 99999999877766 4899999998765 44444433   32 2 11  23334332    23322 


Q ss_pred             -CCccEEEEccCC
Q 021300          246 -GTMDGIIDTVSA  257 (314)
Q Consensus       246 -~~~d~v~d~~g~  257 (314)
                       +.+|+++.+.|.
T Consensus        85 ~g~id~li~~ag~   97 (253)
T PRK07904         85 GGDVDVAIVAFGL   97 (253)
T ss_pred             cCCCCEEEEeeec
Confidence             479999988764

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=95.80  E-value=0.083  Score=46.32  Aligned_cols=75  Identities=17%  Similarity=0.282  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.++||.|+ +++|...+..+...|++++++.+++++.+++.+.+   +.+..   .|-.+.+.+...       .+.+
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI   88 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5678999987 99999999888889999999988877665554433   43321   244444332222       2468


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |.++.+.|.
T Consensus        89 d~li~~ag~   97 (265)
T PRK07097         89 DILVNNAGI   97 (265)
T ss_pred             CEEEECCCC
Confidence            999999874

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.80  E-value=0.13  Score=43.94  Aligned_cols=37  Identities=32%  Similarity=0.393  Sum_probs=33.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS  218 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~  218 (314)
                      -.|.+++|.|.|.+|..+++++...|++++.+.+...
T Consensus        21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g   57 (217)
T cd05211          21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDG   57 (217)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence            4689999999999999999999999998888877766

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=95.80  E-value=0.093  Score=45.18  Aligned_cols=74  Identities=16%  Similarity=0.300  Sum_probs=58.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH-HcCCcEE-ecCCCHHHHHHH-cCCccEEEEccCCcc
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE-RLGADSF-LVSRDQDEMQAA-MGTMDGIIDTVSAVH  259 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~-~~ga~~~-v~~~~~~~~~~~-~~~~d~v~d~~g~~~  259 (314)
                      +++|+|+|.+|...++.+...|..|+++++++++.++... ++....+ .+..+++.++++ ...+|+++-++|+..
T Consensus         2 ~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~   78 (225)
T COG0569           2 KIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE   78 (225)
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH
Confidence            5789999999999999999999999999999998877433 4555443 344556776666 458999999999854

>PLN02780 ketoreductase/ oxidoreductase

Probab=95.79  E-value=0.052  Score=49.36  Aligned_cols=45  Identities=20%  Similarity=0.299  Sum_probs=38.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER  226 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~  226 (314)
                      +.|.+++|.|+ +++|.+.++.+...|++|+++.+++++.+++.++
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~   96 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDS   96 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
Confidence            35889999998 9999999988888899999999998877666544

>PRK08177 short chain dehydrogenase; Provisional

Probab=95.78  E-value=0.062  Score=45.88  Aligned_cols=72  Identities=18%  Similarity=0.184  Sum_probs=49.6

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-Cc-EEecCCCHHHHHHH----c-CCccEEEEccC
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-AD-SFLVSRDQDEMQAA----M-GTMDGIIDTVS  256 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-a~-~~v~~~~~~~~~~~----~-~~~d~v~d~~g  256 (314)
                      .+++|.|+ |.+|...+..+...|++|+++++++++..++ ++++ .. ...|-.+++.+.++    . +++|++|.++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-HhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            46889987 9999999988888999999999987766554 3333 22 12344454433332    2 26999999886


Q ss_pred             C
Q 021300          257 A  257 (314)
Q Consensus       257 ~  257 (314)
                      .
T Consensus        81 ~   81 (225)
T PRK08177         81 I   81 (225)
T ss_pred             c
Confidence            4

>PLN03075 nicotianamine synthase; Provisional

Probab=95.77  E-value=0.084  Score=47.18  Aligned_cols=104  Identities=17%  Similarity=0.135  Sum_probs=66.4

Q ss_pred             hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCChhhHHHHHHHcCC----cE--EecCCCHHHHHHHc
Q 021300          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERLGA----DS--FLVSRDQDEMQAAM  245 (314)
Q Consensus       174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~--g~~vi~v~~~~~~~~~~~~~~ga----~~--~v~~~~~~~~~~~~  245 (314)
                      .+..... .++++|+-+|+|+.++.++.+++.+  +.+++.++.+++..+.+.+.+..    ..  -+...+........
T Consensus       115 ~L~~~~~-~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l  193 (296)
T PLN03075        115 LLSQHVN-GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESL  193 (296)
T ss_pred             HHHHhhc-CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhccccc
Confidence            3433332 4778999999999999888888754  45788999998877555444422    11  11112211111113


Q ss_pred             CCccEEEEccC-------CcccHHHHHHhhccCCEEEEEc
Q 021300          246 GTMDGIIDTVS-------AVHPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       246 ~~~d~v~d~~g-------~~~~~~~~~~~l~~~G~~v~~G  278 (314)
                      ++||+||-.+=       -...+..+.+.|++||.++.=.
T Consensus       194 ~~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        194 KEYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             CCcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            57999988741       1234678888999999988765

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.76  E-value=0.1  Score=46.34  Aligned_cols=95  Identities=18%  Similarity=0.220  Sum_probs=71.4

Q ss_pred             ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (314)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~  241 (314)
                      ..||+..+....++....--.|.+++|+|. ..+|.-.+.++...|++|++.-.....                     +
T Consensus       143 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~---------------------l  201 (287)
T PRK14176        143 LVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDD---------------------L  201 (287)
T ss_pred             CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCC---------------------H
Confidence            467777777777777664468999999997 669999999999999998776543222                     2


Q ss_pred             HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCC
Q 021300          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      .+....+|+++.++|.+..+  --+.++++-.++.+|..
T Consensus       202 ~~~~~~ADIvv~AvG~p~~i--~~~~vk~gavVIDvGin  238 (287)
T PRK14176        202 KKYTLDADILVVATGVKHLI--KADMVKEGAVIFDVGIT  238 (287)
T ss_pred             HHHHhhCCEEEEccCCcccc--CHHHcCCCcEEEEeccc
Confidence            33445688999999987643  34588999999999974

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.76  E-value=0.11  Score=50.04  Aligned_cols=72  Identities=17%  Similarity=0.242  Sum_probs=51.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCC
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      -.+.+|+|+|.|..|++++.+++..|+.|++.++......++.+++|.......+.++.+    ..+|+|+-+.|-
T Consensus        13 ~~~~~v~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~----~~~d~vV~Spgi   84 (473)
T PRK00141         13 ELSGRVLVAGAGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEASDQL----DSFSLVVTSPGW   84 (473)
T ss_pred             ccCCeEEEEccCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCchhHh----cCCCEEEeCCCC
Confidence            456789999999999999999999999998888765554444556676554332333332    367888887764

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=95.76  E-value=0.22  Score=43.12  Aligned_cols=69  Identities=19%  Similarity=0.203  Sum_probs=47.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE---EecCCCHHHHHHH-------cCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~---~v~~~~~~~~~~~-------~~~~d~v  251 (314)
                      ++.++||.|+ |.+|...+..+...|++++++.++.     + +..+...   -.|-.+++.+.+.       .+.+|++
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----L-TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL   80 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----h-hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999987 9999999999988999999998875     1 1223221   1233444333332       2468999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      |.+.|.
T Consensus        81 i~~ag~   86 (252)
T PRK08220         81 VNAAGI   86 (252)
T ss_pred             EECCCc
Confidence            999874

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=95.76  E-value=0.18  Score=43.27  Aligned_cols=73  Identities=16%  Similarity=0.198  Sum_probs=47.1

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-ChhhHHHHHHHc---CCcE---EecCCCHHHHH-------HHcCCcc
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERL---GADS---FLVSRDQDEMQ-------AAMGTMD  249 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~-~~~~~~~~~~~~---ga~~---~v~~~~~~~~~-------~~~~~~d  249 (314)
                      .++||.|+ |.+|...++.+...|++++++.+ ++++.++..++.   +...   ..|..+++.+.       +..+.+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            36889987 99999999999999999988887 444443333322   2211   12444443322       2234699


Q ss_pred             EEEEccCC
Q 021300          250 GIIDTVSA  257 (314)
Q Consensus       250 ~v~d~~g~  257 (314)
                      .+|.+.|.
T Consensus        81 ~vi~~ag~   88 (242)
T TIGR01829        81 VLVNNAGI   88 (242)
T ss_pred             EEEECCCC
Confidence            99999874

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07577 short chain dehydrogenase; Provisional

Probab=95.76  E-value=0.12  Score=44.11  Aligned_cols=68  Identities=21%  Similarity=0.200  Sum_probs=47.0

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-EEecCCCHHHHHH----Hc--CCccEEEEcc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQA----AM--GTMDGIIDTV  255 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~-~~v~~~~~~~~~~----~~--~~~d~v~d~~  255 (314)
                      +.++||.|+ |.+|...++.+...|.+|+++.++.+..      +..+ ...|-.+++.+..    +.  .++|++|.+.
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a   76 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNV   76 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence            568999998 9999999999999999999998876531      1222 1234444433322    21  2689999998


Q ss_pred             CC
Q 021300          256 SA  257 (314)
Q Consensus       256 g~  257 (314)
                      |.
T Consensus        77 g~   78 (234)
T PRK07577         77 GI   78 (234)
T ss_pred             CC
Confidence            74

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=95.73  E-value=0.21  Score=43.66  Aligned_cols=76  Identities=20%  Similarity=0.218  Sum_probs=49.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHH---HcCCcE---EecCCCHHHHHHH-------cC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIE---RLGADS---FLVSRDQDEMQAA-------MG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~~~---~~ga~~---~v~~~~~~~~~~~-------~~  246 (314)
                      -.+.++||.|+ |.+|...++.+...|++++++.++.. ....+.+   ..+...   ..|-.+.+.+.++       .+
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g   84 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG   84 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35789999987 99999999999999999888777533 2222222   234321   2244444433222       24


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      .+|+++.+.|.
T Consensus        85 ~id~lv~~ag~   95 (261)
T PRK08936         85 TLDVMINNAGI   95 (261)
T ss_pred             CCCEEEECCCC
Confidence            68999999874

>PRK06841 short chain dehydrogenase; Provisional

Probab=95.73  E-value=0.099  Score=45.38  Aligned_cols=74  Identities=23%  Similarity=0.370  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC-c---EEecCCCHHHHHHH-------cCCccE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-D---SFLVSRDQDEMQAA-------MGTMDG  250 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga-~---~~v~~~~~~~~~~~-------~~~~d~  250 (314)
                      .+.++||.|+ |.+|...++.+...|++|+++.++.+.. +..+++.. .   ...|-.+++.+.+.       .+.+|+
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4678999997 9999999999988999999998876543 33333322 1   11344444333222       246899


Q ss_pred             EEEccCC
Q 021300          251 IIDTVSA  257 (314)
Q Consensus       251 v~d~~g~  257 (314)
                      ++.++|.
T Consensus        93 vi~~ag~   99 (255)
T PRK06841         93 LVNSAGV   99 (255)
T ss_pred             EEECCCC
Confidence            9999874

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=95.71  E-value=0.1  Score=45.11  Aligned_cols=100  Identities=25%  Similarity=0.305  Sum_probs=71.4

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCC---c-EEecCCCHHHHHHHcCCccEEEEcc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGA---D-SFLVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~ga---~-~~v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      .++|++||=+++|. |-.|..+++..| ++|++++-++..+....++..-   . .-+...+...+.--.+.||+|.-+.
T Consensus        49 ~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LPf~D~sFD~vt~~f  127 (238)
T COG2226          49 IKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLPFPDNSFDAVTISF  127 (238)
T ss_pred             CCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCCCCCCccCEEEeee
Confidence            46899999887764 889999999886 5999999999887666655542   1 1123344444433345799988776


Q ss_pred             CC------cccHHHHHHhhccCCEEEEEcCCC
Q 021300          256 SA------VHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       256 g~------~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      |-      ...+..+.+.|+|+|+++.+-...
T Consensus       128 glrnv~d~~~aL~E~~RVlKpgG~~~vle~~~  159 (238)
T COG2226         128 GLRNVTDIDKALKEMYRVLKPGGRLLVLEFSK  159 (238)
T ss_pred             hhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence            62      235888999999999999886654

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.70  E-value=0.071  Score=45.48  Aligned_cols=34  Identities=26%  Similarity=0.455  Sum_probs=28.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS  216 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~  216 (314)
                      ...+|+|+|+|++|..+++.+...|. ++++++.+
T Consensus        27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            34679999999999999999999998 57676665

>PRK00811 spermidine synthase; Provisional

Probab=95.70  E-value=0.16  Score=45.42  Aligned_cols=96  Identities=19%  Similarity=0.159  Sum_probs=60.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcC-----C--c---EEecCCCHHHHHHHcCCccE
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLG-----A--D---SFLVSRDQDEMQAAMGTMDG  250 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~g-----a--~---~~v~~~~~~~~~~~~~~~d~  250 (314)
                      ...++||++|+|. |..+..+++..+. ++++++.+++-.+.+.+.+.     .  +   .++..+....+....+.||+
T Consensus        75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDv  153 (283)
T PRK00811         75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAETENSFDV  153 (283)
T ss_pred             CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhhCCCcccE
Confidence            4567899998865 6667777776554 78888888776544433332     1  1   12222223444443457999


Q ss_pred             EEEccCCc----------ccHHHHHHhhccCCEEEEEc
Q 021300          251 IIDTVSAV----------HPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       251 v~d~~g~~----------~~~~~~~~~l~~~G~~v~~G  278 (314)
                      |+-....+          ..+..+.+.|+++|.++.-.
T Consensus       154 Ii~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~  191 (283)
T PRK00811        154 IIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS  191 (283)
T ss_pred             EEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence            88654221          12467889999999998753

>TIGR00438 rrmJ cell division protein FtsJ

Probab=95.69  E-value=0.13  Score=42.72  Aligned_cols=97  Identities=20%  Similarity=0.185  Sum_probs=58.7

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHC-C-CeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHH---HHHHH--cCCcc
Q 021300          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAM-G-VKVTVISTSPSKKSEAIERLGADSF-LVSRDQD---EMQAA--MGTMD  249 (314)
Q Consensus       178 ~~~~~~g~~vlI~Gag~vG~~a~~~a~~~-g-~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~---~~~~~--~~~~d  249 (314)
                      ...+++|++||.+|+|+-+.. ..+++.. + .+++.++.++..     +..+.+.+ .+..+.+   .+.+.  .+++|
T Consensus        27 ~~~i~~g~~VLDiG~GtG~~~-~~l~~~~~~~~~v~~vDis~~~-----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D  100 (188)
T TIGR00438        27 FKLIKPGDTVLDLGAAPGGWS-QVAVEQVGGKGRVIAVDLQPMK-----PIENVDFIRGDFTDEEVLNKIRERVGDDKVD  100 (188)
T ss_pred             hcccCCCCEEEEecCCCCHHH-HHHHHHhCCCceEEEEeccccc-----cCCCceEEEeeCCChhHHHHHHHHhCCCCcc
Confidence            445789999999998775543 4444433 3 478888888753     11234322 1333322   22222  23699


Q ss_pred             EEEEcc-----CC------------cccHHHHHHhhccCCEEEEEcCC
Q 021300          250 GIIDTV-----SA------------VHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       250 ~v~d~~-----g~------------~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      +|+...     |.            ...+..+.++|+++|+++.....
T Consensus       101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~~~  148 (188)
T TIGR00438       101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKVFQ  148 (188)
T ss_pred             EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEEcc
Confidence            999532     21            23467789999999999986543

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=95.69  E-value=0.095  Score=48.16  Aligned_cols=76  Identities=20%  Similarity=0.289  Sum_probs=54.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc--CC--cEE-ecCCCHHHHHHHcCCccEEEEcc
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--GA--DSF-LVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~--ga--~~~-v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      ..+.+|||.|+ |.+|...++.+...|.+|+++.++......+.+.+  +.  ..+ .|-.+.+.+.++..++|.||.++
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A   87 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA   87 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence            56789999997 99999999999989999999888776554444333  11  111 23344556666666799999988


Q ss_pred             CC
Q 021300          256 SA  257 (314)
Q Consensus       256 g~  257 (314)
                      +.
T Consensus        88 ~~   89 (353)
T PLN02896         88 AS   89 (353)
T ss_pred             cc
Confidence            63

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.69  E-value=0.041  Score=55.12  Aligned_cols=77  Identities=22%  Similarity=0.364  Sum_probs=53.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh--------------------hHHHHHHHcCCcEEecCCC-HH-
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--------------------KKSEAIERLGADSFLVSRD-QD-  239 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~--------------------~~~~~~~~~ga~~~v~~~~-~~-  239 (314)
                      ..|.+|+|+|+|+.|+.++..++..|.+|+++.+.+.                    +..+..+++|.+...+..- .+ 
T Consensus       325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~i  404 (654)
T PRK12769        325 KSDKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDI  404 (654)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCcC
Confidence            3688999999999999999999999999999986532                    1234456778654433211 11 


Q ss_pred             HHHHHcCCccEEEEccCCc
Q 021300          240 EMQAAMGTMDGIIDTVSAV  258 (314)
Q Consensus       240 ~~~~~~~~~d~v~d~~g~~  258 (314)
                      .+..+...||.||.++|..
T Consensus       405 ~~~~~~~~~DavilAtGa~  423 (654)
T PRK12769        405 SLESLLEDYDAVFVGVGTY  423 (654)
T ss_pred             CHHHHHhcCCEEEEeCCCC
Confidence            1223335799999998853

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=95.68  E-value=0.089  Score=46.40  Aligned_cols=100  Identities=17%  Similarity=0.183  Sum_probs=63.1

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHHcC------CcEE-ecCCCHHHHHHHcCCccE
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERLG------ADSF-LVSRDQDEMQAAMGTMDG  250 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~~~g------a~~~-v~~~~~~~~~~~~~~~d~  250 (314)
                      .++++++||-+|+|. |..+..+++..+  .+++.++.+++..+.+.++..      .+.+ +...+...+....+.||.
T Consensus        70 ~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~lp~~~~sfD~  148 (261)
T PLN02233         70 GAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATDLPFDDCYFDA  148 (261)
T ss_pred             CCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccccCCCCCCCEeE
Confidence            368899999999865 556777777654  589999999987766644322      1111 111111111111236999


Q ss_pred             EEEccCC------cccHHHHHHhhccCCEEEEEcCC
Q 021300          251 IIDTVSA------VHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       251 v~d~~g~------~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      |+-..+-      ...+..+.+.|+|||+++.+-..
T Consensus       149 V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~  184 (261)
T PLN02233        149 ITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN  184 (261)
T ss_pred             EEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence            8764331      12478899999999999887543

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=95.68  E-value=0.073  Score=48.52  Aligned_cols=91  Identities=21%  Similarity=0.235  Sum_probs=64.6

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-------CCc---EEecCCCHHHHHHHcCCccEEEEc
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-------GAD---SFLVSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~-------ga~---~~v~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      .+|.|+|+|.+|.+.+..+...|.+|.++.+++++.+.+.+..       |..   .+....+   ..+....+|+|+-+
T Consensus         5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~---~~e~~~~aD~Vi~~   81 (328)
T PRK14618          5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTAD---PEEALAGADFAVVA   81 (328)
T ss_pred             CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCC---HHHHHcCCCEEEEE
Confidence            4689999999999999999888999999999887766664321       210   0111122   22334679999999


Q ss_pred             cCCcccHHHHHHhhccCCEEEEEcC
Q 021300          255 VSAVHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       255 ~g~~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      +.... +...++.++++-.++.+..
T Consensus        82 v~~~~-~~~v~~~l~~~~~vi~~~~  105 (328)
T PRK14618         82 VPSKA-LRETLAGLPRALGYVSCAK  105 (328)
T ss_pred             CchHH-HHHHHHhcCcCCEEEEEee
Confidence            98885 6788888888777776633

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=95.68  E-value=0.013  Score=52.44  Aligned_cols=134  Identities=30%  Similarity=0.367  Sum_probs=73.0

Q ss_pred             cceEEeecCCceEECCCCCCcccccccchhhhhhh--hhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEe
Q 021300          138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVY--SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVIS  214 (314)
Q Consensus       138 ~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~--~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~  214 (314)
                      |.+|-.-+...++.+++++.|....    ...|..  ..+...  .++|++||=+|+|+ |.+++..++ +|+ +|+.++
T Consensus       120 w~~~~~~~~~~~I~idPg~AFGTG~----H~TT~lcl~~l~~~--~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~D  191 (295)
T PF06325_consen  120 WEEYPEPPDEIVIEIDPGMAFGTGH----HPTTRLCLELLEKY--VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAID  191 (295)
T ss_dssp             T----SSTTSEEEEESTTSSS-SSH----CHHHHHHHHHHHHH--SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEE
T ss_pred             CcccCCCCCcEEEEECCCCcccCCC----CHHHHHHHHHHHHh--ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEec
Confidence            4444223446677888777765543    323322  223333  48899999888643 555555555 477 788888


Q ss_pred             CChhhHHHHHH---HcCC-cEEecCCCHHHHHHHcCCccEEEEccCCcc---cHHHHHHhhccCCEEEEEcCCCC
Q 021300          215 TSPSKKSEAIE---RLGA-DSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---PLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       215 ~~~~~~~~~~~---~~ga-~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~---~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      .++...+.+.+   .-+. +.+......+.   ..+.||+|+-++-...   .+....+.|+++|.+++.|....
T Consensus       192 iDp~Av~~a~~N~~~N~~~~~~~v~~~~~~---~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~~  263 (295)
T PF06325_consen  192 IDPLAVEAARENAELNGVEDRIEVSLSEDL---VEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGILEE  263 (295)
T ss_dssp             SSCHHHHHHHHHHHHTT-TTCEEESCTSCT---CCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEGG
T ss_pred             CCHHHHHHHHHHHHHcCCCeeEEEEEeccc---ccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccHH
Confidence            88765433322   2232 22211111111   1267999998776442   13345567889999999998754

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.67  E-value=0.062  Score=49.25  Aligned_cols=76  Identities=25%  Similarity=0.416  Sum_probs=49.4

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCh---------------------hhHH---HHHHHcCCcE-E---ec
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP---------------------SKKS---EAIERLGADS-F---LV  234 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~---------------------~~~~---~~~~~~ga~~-~---v~  234 (314)
                      ..+|+|+|+|++|..+++.+...|. ++++++.+.                     .+.+   +.++++..+. +   ..
T Consensus        24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~  103 (339)
T PRK07688         24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQ  103 (339)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence            3679999999999999999999998 777777652                     1111   1123333211 1   11


Q ss_pred             CCCHHHHHHHcCCccEEEEccCCcc
Q 021300          235 SRDQDEMQAAMGTMDGIIDTVSAVH  259 (314)
Q Consensus       235 ~~~~~~~~~~~~~~d~v~d~~g~~~  259 (314)
                      .-.++.+.++..++|+|+|++.+..
T Consensus       104 ~~~~~~~~~~~~~~DlVid~~Dn~~  128 (339)
T PRK07688        104 DVTAEELEELVTGVDLIIDATDNFE  128 (339)
T ss_pred             cCCHHHHHHHHcCCCEEEEcCCCHH
Confidence            1123445566678999999998775

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.67  E-value=0.12  Score=45.82  Aligned_cols=96  Identities=16%  Similarity=0.207  Sum_probs=71.8

Q ss_pred             ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (314)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~  241 (314)
                      .+||+..+.+..++....--.|.+++|+|. ..+|.=...++...|++|++.-+....                     +
T Consensus       137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~---------------------l  195 (278)
T PRK14172        137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKN---------------------L  195 (278)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence            467777777777776664468999999996 999999999999999988776543222                     2


Q ss_pred             HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      .+....+|+++-++|.+..+  --+.+++|-.++.+|-..
T Consensus       196 ~~~~~~ADIvIsAvGkp~~i--~~~~ik~gavVIDvGin~  233 (278)
T PRK14172        196 KEVCKKADILVVAIGRPKFI--DEEYVKEGAIVIDVGTSS  233 (278)
T ss_pred             HHHHhhCCEEEEcCCCcCcc--CHHHcCCCcEEEEeeccc
Confidence            33445589999999988633  345689999999998754

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.67  E-value=0.087  Score=43.44  Aligned_cols=92  Identities=18%  Similarity=0.312  Sum_probs=53.2

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCh------------------hhHHHH---HHHcC-CcEEec---CCCHH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP------------------SKKSEA---IERLG-ADSFLV---SRDQD  239 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~------------------~~~~~~---~~~~g-a~~~v~---~~~~~  239 (314)
                      +|+|+|+|++|...++.+...|. ++++++.+.                  .+.+.+   ++++. ...+..   .-+.+
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~~   80 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDEN   80 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecChh
Confidence            48899999999999999988898 577777653                  111111   12222 112111   11123


Q ss_pred             HHHHHcCCccEEEEccCCcccHHHHHHhhccC-CEEEEE
Q 021300          240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLV  277 (314)
Q Consensus       240 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~  277 (314)
                      ...+...++|+||+|+.+...-....+.+.+. ++-...
T Consensus        81 ~~~~~l~~~DlVi~~~d~~~~r~~i~~~~~~~~~ip~i~  119 (174)
T cd01487          81 NLEGLFGDCDIVVEAFDNAETKAMLAESLLGNKNKPVVC  119 (174)
T ss_pred             hHHHHhcCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEE
Confidence            33445568999999988765333344544443 543333

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=95.63  E-value=0.061  Score=48.74  Aligned_cols=75  Identities=20%  Similarity=0.233  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCC--c-EE--ecCCCHHHHHHHcCCccEEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGA--D-SF--LVSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga--~-~~--v~~~~~~~~~~~~~~~d~v~d  253 (314)
                      .|.++||.|+ |.+|...+..+...|++|+++.++........+.   .+.  . .+  .|-.+.+.+.+...++|+||.
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   83 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH   83 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence            4688999997 9999999999998999998887776543322111   121  1 11  244555566666668999999


Q ss_pred             ccCC
Q 021300          254 TVSA  257 (314)
Q Consensus       254 ~~g~  257 (314)
                      +++.
T Consensus        84 ~A~~   87 (325)
T PLN02989         84 TASP   87 (325)
T ss_pred             eCCC
Confidence            9873

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.62  E-value=0.12  Score=45.03  Aligned_cols=75  Identities=17%  Similarity=0.249  Sum_probs=50.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHH---HHHcCCcE---EecCCCHHHHHHH-------cCC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGADS---FLVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~---~~~~ga~~---~v~~~~~~~~~~~-------~~~  247 (314)
                      ..|.++||.|+ +.+|...++.+...|++++++.++ ++.+++   .++.+.+.   ..|-.+.+.+...       .+.
T Consensus        13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   91 (258)
T PRK06935         13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK   91 (258)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999997 999999999999999999998887 333333   23334322   1244444433222       246


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|+++.+.|.
T Consensus        92 id~li~~ag~  101 (258)
T PRK06935         92 IDILVNNAGT  101 (258)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.61  E-value=0.16  Score=39.83  Aligned_cols=94  Identities=21%  Similarity=0.277  Sum_probs=55.7

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------hh----HHHHHHHcCCcEEec---CC
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP-------------------SK----KSEAIERLGADSFLV---SR  236 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~-------------------~~----~~~~~~~~ga~~~v~---~~  236 (314)
                      ..+|+|+|+|++|..++..+...|. ++++++...                   .+    .+++.+..+...+..   .-
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~   81 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI   81 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence            3689999999999999999988898 676776431                   01    122222222222211   11


Q ss_pred             CHHHHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEE
Q 021300          237 DQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       237 ~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~  277 (314)
                      +.+...+..+++|+||+|+.+...-..+.+..+..++-+..
T Consensus        82 ~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i~  122 (135)
T PF00899_consen   82 DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGIPFID  122 (135)
T ss_dssp             SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT-EEEE
T ss_pred             ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCCCEEE
Confidence            23444455568999999999876444555555555553333

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.60  E-value=0.079  Score=45.65  Aligned_cols=75  Identities=13%  Similarity=0.229  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.+++|.|+ |.+|..++..+...|.+|+++.+++++..++.+.+   +...   ..|-.+++.+...       .+..
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4568999987 99999999999989999999999887665554432   2221   1233444332222       2469


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |+++.+.|.
T Consensus        85 d~lv~~ag~   93 (241)
T PRK07454         85 DVLINNAGM   93 (241)
T ss_pred             CEEEECCCc
Confidence            999999884

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.60  E-value=0.086  Score=49.11  Aligned_cols=77  Identities=23%  Similarity=0.346  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC-------------------hhhHHHHHHHc----CCcEEecC---
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS-------------------PSKKSEAIERL----GADSFLVS---  235 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~-------------------~~~~~~~~~~~----ga~~~v~~---  235 (314)
                      ...+|+|+|+|++|..++..+...|. ++++++.+                   ..+.+.+.+++    +...+...   
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~  213 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQER  213 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence            45789999999999999999999998 67777665                   12222222222    22122111   


Q ss_pred             CCHHHHHHHcCCccEEEEccCCcc
Q 021300          236 RDQDEMQAAMGTMDGIIDTVSAVH  259 (314)
Q Consensus       236 ~~~~~~~~~~~~~d~v~d~~g~~~  259 (314)
                      -+.+.+.++..++|+|++|+.+..
T Consensus       214 ~~~~~~~~~~~~~D~Vv~~~d~~~  237 (376)
T PRK08762        214 VTSDNVEALLQDVDVVVDGADNFP  237 (376)
T ss_pred             CChHHHHHHHhCCCEEEECCCCHH
Confidence            122344455568999999999865

>PRK08017 oxidoreductase; Provisional

Probab=95.59  E-value=0.11  Score=45.09  Aligned_cols=72  Identities=19%  Similarity=0.291  Sum_probs=51.4

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHH----HH---c-CCccEEEEc
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQ----AA---M-GTMDGIIDT  254 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~----~~---~-~~~d~v~d~  254 (314)
                      +++||.|+ |.+|...++.+...|++++++.++.++.+.+ ++.+++.+ .|..+.+.+.    ..   . +.+|.++.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM-NSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH-HhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            47999998 9999999999999999999999988776555 45565443 2444443222    21   1 458889988


Q ss_pred             cCC
Q 021300          255 VSA  257 (314)
Q Consensus       255 ~g~  257 (314)
                      .|.
T Consensus        82 ag~   84 (256)
T PRK08017         82 AGF   84 (256)
T ss_pred             CCC
Confidence            774

>PRK06198 short chain dehydrogenase; Provisional

Probab=95.59  E-value=0.081  Score=46.10  Aligned_cols=76  Identities=18%  Similarity=0.279  Sum_probs=52.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHH---HcCCcE---EecCCCHHHHHHH-------cC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIE---RLGADS---FLVSRDQDEMQAA-------MG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~---~~ga~~---~v~~~~~~~~~~~-------~~  246 (314)
                      ..+.+++|.|+ |.+|...++.+...|++ |+++.++.++...+.+   +.+...   .+|-.+++.+.++       .+
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG   83 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            35678999997 99999999999999998 8888887665543332   334332   2344555433322       24


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      ++|++|.+.|.
T Consensus        84 ~id~li~~ag~   94 (260)
T PRK06198         84 RLDALVNAAGL   94 (260)
T ss_pred             CCCEEEECCCc
Confidence            69999999974

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=95.58  E-value=0.063  Score=43.41  Aligned_cols=88  Identities=18%  Similarity=0.299  Sum_probs=59.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC----------cEEecCCCHHHHHHHcCCccEEEEcc
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA----------DSFLVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga----------~~~v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      +|.|+|+|..|.+++..+...|.+|.+..++++..+.+.+.-..          +.+..+.   .+.+..++.|+++-++
T Consensus         1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~---dl~~a~~~ad~Iiiav   77 (157)
T PF01210_consen    1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATT---DLEEALEDADIIIIAV   77 (157)
T ss_dssp             EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEES---SHHHHHTT-SEEEE-S
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCccccccc---CHHHHhCcccEEEecc
Confidence            58899999999999999999999999999999877766543221          1111122   2334557899999999


Q ss_pred             CCcccHHHHHHhhcc---CCEEEEE
Q 021300          256 SAVHPLMPLIGLLKS---QGKLVLV  277 (314)
Q Consensus       256 g~~~~~~~~~~~l~~---~G~~v~~  277 (314)
                      .+.. ....++.+++   .+..+..
T Consensus        78 Ps~~-~~~~~~~l~~~l~~~~~ii~  101 (157)
T PF01210_consen   78 PSQA-HREVLEQLAPYLKKGQIIIS  101 (157)
T ss_dssp             -GGG-HHHHHHHHTTTSHTT-EEEE
T ss_pred             cHHH-HHHHHHHHhhccCCCCEEEE
Confidence            8775 6667776665   4554444

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=95.58  E-value=0.11  Score=47.25  Aligned_cols=88  Identities=23%  Similarity=0.203  Sum_probs=61.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~  261 (314)
                      -.+.+|.|+|.|.+|.+.++-++..|.+|++..+...+..+.+++.|....    +   ..+.....|+|+-++.... .
T Consensus        15 L~gktIgIIG~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~----s---~~eaa~~ADVVvLaVPd~~-~   86 (330)
T PRK05479         15 IKGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVL----T---VAEAAKWADVIMILLPDEV-Q   86 (330)
T ss_pred             hCCCEEEEEeeHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeC----C---HHHHHhcCCEEEEcCCHHH-H
Confidence            457889999999999999999999999998877776655566666676421    2   2345567899999998654 2


Q ss_pred             HHH-----HHhhccCCEEEEE
Q 021300          262 MPL-----IGLLKSQGKLVLV  277 (314)
Q Consensus       262 ~~~-----~~~l~~~G~~v~~  277 (314)
                      ...     ...++++..+++.
T Consensus        87 ~~V~~~~I~~~Lk~g~iL~~a  107 (330)
T PRK05479         87 AEVYEEEIEPNLKEGAALAFA  107 (330)
T ss_pred             HHHHHHHHHhcCCCCCEEEEC
Confidence            333     3345555555433

>PLN02366 spermidine synthase

Probab=95.57  E-value=0.15  Score=46.10  Aligned_cols=95  Identities=20%  Similarity=0.229  Sum_probs=58.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHH-cCC------c---EEecCCCHHHHHHH-cCCcc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIER-LGA------D---SFLVSRDQDEMQAA-MGTMD  249 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~-~ga------~---~~v~~~~~~~~~~~-~~~~d  249 (314)
                      ...++||++|+|. |..+..+++..+. ++.+++.+++-. +++++ +..      +   .++..+....+.+. .+.||
T Consensus        90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi-~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yD  167 (308)
T PLN02366         90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVI-DVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYD  167 (308)
T ss_pred             CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHH-HHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCC
Confidence            5578999998865 5566777887654 677777776544 33333 321      1   11222222344444 34699


Q ss_pred             EEEEccCCc----------ccHHHHHHhhccCCEEEEEc
Q 021300          250 GIIDTVSAV----------HPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       250 ~v~d~~g~~----------~~~~~~~~~l~~~G~~v~~G  278 (314)
                      +||--...+          ..+..+.+.|+++|.++.-+
T Consensus       168 vIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~  206 (308)
T PLN02366        168 AIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA  206 (308)
T ss_pred             EEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence            988654331          23677889999999997654

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=95.56  E-value=0.078  Score=47.97  Aligned_cols=74  Identities=22%  Similarity=0.252  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---C----CcEE-ecCCCHHHHHHHcCCccEEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---G----ADSF-LVSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---g----a~~~-v~~~~~~~~~~~~~~~d~v~d  253 (314)
                      .|.+|||.|+ |.+|...+..+...|.+|+++.++..+...+.+.+   +    ...+ .|-.+++.+.++..++|+||.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   83 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH   83 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence            4679999997 99999999988888999998888765432221111   1    1111 133444556666668999999


Q ss_pred             ccC
Q 021300          254 TVS  256 (314)
Q Consensus       254 ~~g  256 (314)
                      +++
T Consensus        84 ~A~   86 (322)
T PLN02986         84 TAS   86 (322)
T ss_pred             eCC
Confidence            886

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=95.56  E-value=0.075  Score=51.77  Aligned_cols=96  Identities=19%  Similarity=0.106  Sum_probs=64.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc---
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~---  259 (314)
                      .+.+++|+|+|++|.+++..+...|++++++.++.++.+++.++++... +...+  ........+|+++++++...   
T Consensus       378 ~~k~vlIlGaGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~~-~~~~~--~~~~~~~~~diiINtT~vGm~~~  454 (529)
T PLN02520        378 AGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQA-LTLAD--LENFHPEEGMILANTTSVGMQPN  454 (529)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCce-eeHhH--hhhhccccCeEEEecccCCCCCC
Confidence            4678999999999999999999999999999998888888887776432 22211  11112235789998875321   


Q ss_pred             --cHHHHHHhhccCCEEEEEcCCC
Q 021300          260 --PLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       260 --~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                        ........+++.+.++++-..+
T Consensus       455 ~~~~pl~~~~l~~~~~v~D~vY~P  478 (529)
T PLN02520        455 VDETPISKHALKHYSLVFDAVYTP  478 (529)
T ss_pred             CCCCcccHhhCCCCCEEEEeccCC
Confidence              0111234567777777775543

>PRK06932 glycerate dehydrogenase; Provisional

Probab=95.56  E-value=0.077  Score=48.14  Aligned_cols=84  Identities=20%  Similarity=0.256  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc---
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~---  259 (314)
                      .|.++.|+|-|.+|...++.++.+|++|+.+.+.....      ....       ...+.++....|+|+-+..-..   
T Consensus       146 ~gktvgIiG~G~IG~~va~~l~~fg~~V~~~~~~~~~~------~~~~-------~~~l~ell~~sDiv~l~~Plt~~T~  212 (314)
T PRK06932        146 RGSTLGVFGKGCLGTEVGRLAQALGMKVLYAEHKGASV------CREG-------YTPFEEVLKQADIVTLHCPLTETTQ  212 (314)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCcccc------cccc-------cCCHHHHHHhCCEEEEcCCCChHHh
Confidence            57899999999999999999999999998876542110      0000       0123344445666666554211   


Q ss_pred             --cHHHHHHhhccCCEEEEEcC
Q 021300          260 --PLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       260 --~~~~~~~~l~~~G~~v~~G~  279 (314)
                        .-...+..|+++..+|.+|.
T Consensus       213 ~li~~~~l~~mk~ga~lIN~aR  234 (314)
T PRK06932        213 NLINAETLALMKPTAFLINTGR  234 (314)
T ss_pred             cccCHHHHHhCCCCeEEEECCC
Confidence              12345666666666666665

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=95.55  E-value=0.13  Score=46.38  Aligned_cols=90  Identities=20%  Similarity=0.230  Sum_probs=63.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc-
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-  260 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~-  260 (314)
                      -.|.+|.|+|-|.+|...++.++.+|.+|++..+.. +.....+..|+.. .      .+.++....|+|+-+..+... 
T Consensus        14 LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~~-~s~~~A~~~G~~v-~------sl~Eaak~ADVV~llLPd~~t~   85 (335)
T PRK13403         14 LQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPG-KSFEVAKADGFEV-M------SVSEAVRTAQVVQMLLPDEQQA   85 (335)
T ss_pred             hCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECcc-hhhHHHHHcCCEE-C------CHHHHHhcCCEEEEeCCChHHH
Confidence            467899999999999999999999999999887663 3334445566632 1      234566679999998876432 


Q ss_pred             --H-HHHHHhhccCCEEEEEcC
Q 021300          261 --L-MPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       261 --~-~~~~~~l~~~G~~v~~G~  279 (314)
                        + ...+..|+++..+++...
T Consensus        86 ~V~~~eil~~MK~GaiL~f~hg  107 (335)
T PRK13403         86 HVYKAEVEENLREGQMLLFSHG  107 (335)
T ss_pred             HHHHHHHHhcCCCCCEEEECCC
Confidence              1 235666777776666544

>TIGR00417 speE spermidine synthase

Probab=95.55  E-value=0.2  Score=44.32  Aligned_cols=97  Identities=21%  Similarity=0.147  Sum_probs=57.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCC---------cEEecCCCHHHHHHHcCCccEE
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA---------DSFLVSRDQDEMQAAMGTMDGI  251 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga---------~~~v~~~~~~~~~~~~~~~d~v  251 (314)
                      +.+.+||++|+|. |..+..+++.... ++++++.+++-.+.+.+.+..         -.++..+..+.+....+.||+|
T Consensus        71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~~~~yDvI  149 (270)
T TIGR00417        71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADTENTFDVI  149 (270)
T ss_pred             CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhCCCCccEE
Confidence            3456999998865 4455666666534 777787776655444332211         1122222233444445689998


Q ss_pred             EEccCC----------cccHHHHHHhhccCCEEEEEcC
Q 021300          252 IDTVSA----------VHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       252 ~d~~g~----------~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      +-....          ...+..+.+.|+++|.++....
T Consensus       150 i~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~~  187 (270)
T TIGR00417       150 IVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQSE  187 (270)
T ss_pred             EEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcCC
Confidence            754321          1225678899999999998743

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.55  E-value=0.073  Score=43.26  Aligned_cols=76  Identities=21%  Similarity=0.408  Sum_probs=58.8

Q ss_pred             CCCEEEEEc-CChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH----HH---HHH---HcCCccEE
Q 021300          183 PGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ----DE---MQA---AMGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~G-ag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~----~~---~~~---~~~~~d~v  251 (314)
                      +|-..||.| ++++|.+++..+...|+.+++.+-...+-.+.++++|.+.++.+.+.    |.   +..   ..+..|..
T Consensus         8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~   87 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL   87 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence            455567776 59999999999999999999999888888899999999888876653    21   111   12358999


Q ss_pred             EEccCCc
Q 021300          252 IDTVSAV  258 (314)
Q Consensus       252 ~d~~g~~  258 (314)
                      ++|.|..
T Consensus        88 vncagia   94 (260)
T KOG1199|consen   88 VNCAGIA   94 (260)
T ss_pred             eecccee
Confidence            9999954

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=95.55  E-value=0.13  Score=46.52  Aligned_cols=35  Identities=43%  Similarity=0.649  Sum_probs=32.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      -.|.++.|+|-|.+|...++.++.+|++|+.+.+.
T Consensus       143 L~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~  177 (311)
T PRK08410        143 IKGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTS  177 (311)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCC
Confidence            36899999999999999999999999999998875

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.53  E-value=0.12  Score=45.62  Aligned_cols=98  Identities=26%  Similarity=0.408  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhh-------------------H---HHHHHHcCC-cEEecCC--
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSK-------------------K---SEAIERLGA-DSFLVSR--  236 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~-------------------~---~~~~~~~ga-~~~v~~~--  236 (314)
                      ...+|+|+|+|++|..++..+...|. ++++++.+.-.                   .   .+..+++.. ..+....  
T Consensus        29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~  108 (268)
T PRK15116         29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF  108 (268)
T ss_pred             cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence            45789999999999999999999995 77777654111                   0   111122221 1111111  


Q ss_pred             -CHHHHHHHc-CCccEEEEccCCcccHHHHHHhhcc-CCEEEEEcCC
Q 021300          237 -DQDEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKS-QGKLVLVGAP  280 (314)
Q Consensus       237 -~~~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~-~G~~v~~G~~  280 (314)
                       .++...++. ..+|+||||+.+...-..+.+..+. +=.++..|..
T Consensus       109 i~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGa  155 (268)
T PRK15116        109 ITPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGA  155 (268)
T ss_pred             cChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCc
Confidence             233333443 4799999999975433334444443 3446666554

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=95.53  E-value=0.09  Score=44.68  Aligned_cols=99  Identities=26%  Similarity=0.207  Sum_probs=60.8

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCcEE-ecCCCHHHHHHHcCCccEEEEc
Q 021300          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADSF-LVSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       179 ~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      ..++++++||-+|+|. |..+..+++.. .+++.++.+++....+.+   +++.+.+ +...+........+.||+|+-.
T Consensus        74 l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~~~  151 (212)
T PRK00312         74 LELKPGDRVLEIGTGS-GYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGWPAYAPFDRILVT  151 (212)
T ss_pred             cCCCCCCEEEEECCCc-cHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCCCcCCCcCEEEEc
Confidence            3468999999998864 55555566653 488888888776544433   3343221 1111110000112469998876


Q ss_pred             cCCcccHHHHHHhhccCCEEEEEcC
Q 021300          255 VSAVHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       255 ~g~~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      ...........+.|+++|+++..-.
T Consensus       152 ~~~~~~~~~l~~~L~~gG~lv~~~~  176 (212)
T PRK00312        152 AAAPEIPRALLEQLKEGGILVAPVG  176 (212)
T ss_pred             cCchhhhHHHHHhcCCCcEEEEEEc
Confidence            5555556778899999999877643

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.51  E-value=0.17  Score=44.99  Aligned_cols=96  Identities=21%  Similarity=0.229  Sum_probs=72.1

Q ss_pred             ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (314)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~  241 (314)
                      .+||+..+....++....--.|.+++|+|. ..+|.-...++...+++|++.-....                     .+
T Consensus       137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~---------------------~l  195 (284)
T PRK14190        137 FLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTK---------------------NL  195 (284)
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCch---------------------hH
Confidence            467777777777777664468999999996 99999999999999999987543221                     22


Q ss_pred             HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      .+....+|+++-++|.+..  ---+.+++|..++.+|...
T Consensus       196 ~~~~~~ADIvI~AvG~p~~--i~~~~ik~gavVIDvGi~~  233 (284)
T PRK14190        196 AELTKQADILIVAVGKPKL--ITADMVKEGAVVIDVGVNR  233 (284)
T ss_pred             HHHHHhCCEEEEecCCCCc--CCHHHcCCCCEEEEeeccc
Confidence            3445568999999998763  2355678999999999763

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.50  E-value=0.12  Score=49.22  Aligned_cols=89  Identities=26%  Similarity=0.369  Sum_probs=60.2

Q ss_pred             EEEEEc-CChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc---H
Q 021300          186 HVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP---L  261 (314)
Q Consensus       186 ~vlI~G-ag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~---~  261 (314)
                      +|.|+| .|.+|.+.+..++..|.+|+++++++++..++++++|+..   ..+.   .+....+|+||-++.....   +
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~---~~~~---~e~~~~aDvVIlavp~~~~~~vl   75 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY---ANDN---IDAAKDADIVIISVPINVTEDVI   75 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee---ccCH---HHHhccCCEEEEecCHHHHHHHH
Confidence            588888 5999999999999999999999998877666667777631   1111   1233467888888775431   2


Q ss_pred             HHHHHhhccCCEEEEEcCC
Q 021300          262 MPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       262 ~~~~~~l~~~G~~v~~G~~  280 (314)
                      ......++++..++.+++.
T Consensus        76 ~~l~~~l~~~~iViDvsSv   94 (437)
T PRK08655         76 KEVAPHVKEGSLLMDVTSV   94 (437)
T ss_pred             HHHHhhCCCCCEEEEcccc
Confidence            2333344566677777753

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.49  E-value=0.095  Score=44.27  Aligned_cols=33  Identities=27%  Similarity=0.475  Sum_probs=28.4

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS  216 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~  216 (314)
                      ..+|+|+|+|++|..+++.+...|. ++++++.+
T Consensus        21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            3679999999999999999999998 67777765

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.49  E-value=0.11  Score=49.49  Aligned_cols=72  Identities=26%  Similarity=0.350  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh-hhHHHH---HHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP-SKKSEA---IERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~-~~~~~~---~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~  258 (314)
                      .+.+++|+|+|.+|+.++..+...|++|+++++.. +...+.   .++.|.+.+. .+..+   +..+.+|+|+.++|..
T Consensus         4 ~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~-~~~~~---~~~~~~d~vv~~~g~~   79 (450)
T PRK14106          4 KGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVL-GEYPE---EFLEGVDLVVVSPGVP   79 (450)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEe-CCcch---hHhhcCCEEEECCCCC
Confidence            46889999998899999999999999999998874 222221   2344655332 22222   3345799999998853

>PRK08703 short chain dehydrogenase; Provisional

Probab=95.48  E-value=0.12  Score=44.40  Aligned_cols=44  Identities=23%  Similarity=0.310  Sum_probs=36.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER  226 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~  226 (314)
                      ++.+++|.|+ |++|...++.+...|++|+++.+++++..++.++
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~   49 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDA   49 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH
Confidence            4578999997 9999999999998999999999988766555443

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.48  E-value=0.14  Score=45.38  Aligned_cols=95  Identities=21%  Similarity=0.253  Sum_probs=71.6

Q ss_pred             ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (314)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~  241 (314)
                      .+||+..+....++....--.|.+++|+|. ..+|.=...++...+++|++.-.....                     +
T Consensus       138 ~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~---------------------l  196 (284)
T PRK14177        138 YLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQN---------------------L  196 (284)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence            457766666667776664568999999996 999999999999999998775533322                     2


Q ss_pred             HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCC
Q 021300          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      ++....+|+++-++|.+..+  --+.+++|-.++.+|..
T Consensus       197 ~~~~~~ADIvIsAvGk~~~i--~~~~ik~gavVIDvGin  233 (284)
T PRK14177        197 PSIVRQADIIVGAVGKPEFI--KADWISEGAVLLDAGYN  233 (284)
T ss_pred             HHHHhhCCEEEEeCCCcCcc--CHHHcCCCCEEEEecCc
Confidence            23445689999999988632  36788999999999975

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.48  E-value=0.016  Score=55.26  Aligned_cols=94  Identities=16%  Similarity=0.160  Sum_probs=58.0

Q ss_pred             cCCCCCCCEEE----EEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-EEecCCCHHHHHHHcCCccEE
Q 021300          178 YGLDKPGMHVG----VVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAAMGTMDGI  251 (314)
Q Consensus       178 ~~~~~~g~~vl----I~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~-~~v~~~~~~~~~~~~~~~d~v  251 (314)
                      ..++++|+.+|    |+|+ |++|.+++|+++..|++|+.+.+.+.+. ...+..+.+ .++|....+....+...    
T Consensus        28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~l~~~----  102 (450)
T PRK08261         28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTW-AAGWGDRFGALVFDATGITDPADLKAL----  102 (450)
T ss_pred             ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccc-ccCcCCcccEEEEECCCCCCHHHHHHH----
Confidence            34467888887    7765 9999999999999999998876655422 111122333 33443332111111100    


Q ss_pred             EEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300          252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       252 ~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                            ...+...++.|.++|+++.++....
T Consensus       103 ------~~~~~~~l~~l~~~griv~i~s~~~  127 (450)
T PRK08261        103 ------YEFFHPVLRSLAPCGRVVVLGRPPE  127 (450)
T ss_pred             ------HHHHHHHHHhccCCCEEEEEccccc
Confidence                  0135667788888999999987653

>PRK08251 short chain dehydrogenase; Provisional

Probab=95.48  E-value=0.13  Score=44.36  Aligned_cols=73  Identities=21%  Similarity=0.299  Sum_probs=50.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-----CCcE---EecCCCHHHHH-------HHcCC
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GADS---FLVSRDQDEMQ-------AAMGT  247 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~-----ga~~---~v~~~~~~~~~-------~~~~~  247 (314)
                      +.++||.|+ |++|...++.+...|++++++++++++..++.+.+     +...   -.|..+++.+.       +..++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            467899987 99999988888888999999999887765554332     2211   12444443322       22347


Q ss_pred             ccEEEEccC
Q 021300          248 MDGIIDTVS  256 (314)
Q Consensus       248 ~d~v~d~~g  256 (314)
                      +|++|.+.|
T Consensus        82 id~vi~~ag   90 (248)
T PRK08251         82 LDRVIVNAG   90 (248)
T ss_pred             CCEEEECCC
Confidence            999999987

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=95.47  E-value=0.12  Score=47.14  Aligned_cols=33  Identities=39%  Similarity=0.654  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST  215 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~  215 (314)
                      .|.++-|+|.|.+|...++.++.+|.+|+++++
T Consensus       141 ~gkTvGIiG~G~IG~~va~~l~afgm~v~~~d~  173 (324)
T COG0111         141 AGKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDP  173 (324)
T ss_pred             cCCEEEEECCCHHHHHHHHHHHhCCCeEEEECC
Confidence            388999999999999999999999999999998

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=95.45  E-value=0.18  Score=49.14  Aligned_cols=89  Identities=22%  Similarity=0.307  Sum_probs=64.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc---
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~---  259 (314)
                      .|.++.|+|.|.+|...++.++.+|.+|+++++....  +..+.+|....       .+.++....|+|+-+.....   
T Consensus       139 ~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~--~~~~~~g~~~~-------~l~ell~~aDiV~l~lP~t~~t~  209 (526)
T PRK13581        139 YGKTLGIIGLGRIGSEVAKRAKAFGMKVIAYDPYISP--ERAAQLGVELV-------SLDELLARADFITLHTPLTPETR  209 (526)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCh--hHHHhcCCEEE-------cHHHHHhhCCEEEEccCCChHhh
Confidence            5889999999999999999999999999999875332  12235565432       13345566899888876431   


Q ss_pred             -cH-HHHHHhhccCCEEEEEcCC
Q 021300          260 -PL-MPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       260 -~~-~~~~~~l~~~G~~v~~G~~  280 (314)
                       .+ ...+..|+++..++.++..
T Consensus       210 ~li~~~~l~~mk~ga~lIN~aRG  232 (526)
T PRK13581        210 GLIGAEELAKMKPGVRIINCARG  232 (526)
T ss_pred             cCcCHHHHhcCCCCeEEEECCCC
Confidence             12 4577888999999988773

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=95.44  E-value=0.1  Score=46.10  Aligned_cols=104  Identities=17%  Similarity=0.063  Sum_probs=64.9

Q ss_pred             hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC-cEE-ecCCCHHHHHHHcCCccEE
Q 021300          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-DSF-LVSRDQDEMQAAMGTMDGI  251 (314)
Q Consensus       174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga-~~~-v~~~~~~~~~~~~~~~d~v  251 (314)
                      ++... .++++.+||=+|+|. |..+..+++..+++++.++.++.....+.+.+.. +.+ +...+........+.||+|
T Consensus        44 ~l~~l-~l~~~~~VLDiGcG~-G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~~~~~~~~FD~V  121 (263)
T PTZ00098         44 ILSDI-ELNENSKVLDIGSGL-GGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDILKKDFPENTFDMI  121 (263)
T ss_pred             HHHhC-CCCCCCEEEEEcCCC-ChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCcccCCCCCCCeEEE
Confidence            34444 368999999898864 5556777777788999999998877666554432 111 1111111100112469998


Q ss_pred             EEcc-----C---CcccHHHHHHhhccCCEEEEEcC
Q 021300          252 IDTV-----S---AVHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       252 ~d~~-----g---~~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      +..-     .   -...+..+.+.|+|+|+++....
T Consensus       122 ~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~  157 (263)
T PTZ00098        122 YSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY  157 (263)
T ss_pred             EEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            8621     1   12246778899999999998754

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=95.44  E-value=0.14  Score=44.93  Aligned_cols=94  Identities=22%  Similarity=0.262  Sum_probs=60.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCC-cE-EecCCCHHHHH-HHcCCccEEEEcc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGA-DS-FLVSRDQDEMQ-AAMGTMDGIIDTV  255 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga-~~-~v~~~~~~~~~-~~~~~~d~v~d~~  255 (314)
                      .++.+||=+|+|. |..+..+++. |.+|+.++.+++....+.+.   .|. +. -+...+...+. ...+.||+|+-..
T Consensus        43 ~~~~~vLDiGcG~-G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~~l~~~~~~~fD~V~~~~  120 (255)
T PRK11036         43 PRPLRVLDAGGGE-GQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQDIAQHLETPVDLILFHA  120 (255)
T ss_pred             CCCCEEEEeCCCc-hHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCHHHHhhhcCCCCCEEEehh
Confidence            4567888888864 6777777774 88999999998876555433   232 11 12223332222 2345799988542


Q ss_pred             C-----C-cccHHHHHHhhccCCEEEEE
Q 021300          256 S-----A-VHPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       256 g-----~-~~~~~~~~~~l~~~G~~v~~  277 (314)
                      .     + ...+..+.+.|+++|+++.+
T Consensus       121 vl~~~~~~~~~l~~~~~~LkpgG~l~i~  148 (255)
T PRK11036        121 VLEWVADPKSVLQTLWSVLRPGGALSLM  148 (255)
T ss_pred             HHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence            2     1 12477889999999999875

>PRK08291 ectoine utilization protein EutC; Validated

Probab=95.42  E-value=0.11  Score=47.50  Aligned_cols=102  Identities=20%  Similarity=0.293  Sum_probs=66.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHH-CCC-eEEEEeCChhhHHHHHHHc----CCcEEecCCCHHHHHHHcCCccEEEEcc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~-~g~-~vi~v~~~~~~~~~~~~~~----ga~~~v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      +...+++|+|+|..|.+.+..+.. .+. ++.++.+++++.+++++++    |.. +....+   ..+.....|+|+.++
T Consensus       130 ~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~~d---~~~al~~aDiVi~aT  205 (330)
T PRK08291        130 EDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVARD---VHEAVAGADIIVTTT  205 (330)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEeCC---HHHHHccCCEEEEee
Confidence            455789999999999887777764 564 7888999988888887755    332 222233   233445689999998


Q ss_pred             CCcccHHHHHHhhccCCEEEEEcCC-CCCcccch
Q 021300          256 SAVHPLMPLIGLLKSQGKLVLVGAP-EKPLELPA  288 (314)
Q Consensus       256 g~~~~~~~~~~~l~~~G~~v~~G~~-~~~~~~~~  288 (314)
                      .....+- -...++++-.+..+|.. +.+.+++.
T Consensus       206 ~s~~p~i-~~~~l~~g~~v~~vg~d~~~~rEld~  238 (330)
T PRK08291        206 PSEEPIL-KAEWLHPGLHVTAMGSDAEHKNEIAP  238 (330)
T ss_pred             CCCCcEe-cHHHcCCCceEEeeCCCCCCcccCCH
Confidence            7653211 12346777777777764 34455554

>PRK08628 short chain dehydrogenase; Provisional

Probab=95.41  E-value=0.11  Score=45.12  Aligned_cols=74  Identities=20%  Similarity=0.271  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcE---EecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~---~v~~~~~~~~~~~-------~~~~  248 (314)
                      .|.++||.|+ |.+|...++.+...|++++++.++++.. ++.++   .+...   ..|-.+++.+...       .+.+
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI   84 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999997 9999999999988999999998887654 33333   23221   2234444333222       2468


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|.++|.
T Consensus        85 d~vi~~ag~   93 (258)
T PRK08628         85 DGLVNNAGV   93 (258)
T ss_pred             CEEEECCcc
Confidence            999999983

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.40  E-value=0.077  Score=46.17  Aligned_cols=77  Identities=26%  Similarity=0.426  Sum_probs=47.9

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhh-------------------HH---HHHHHcCCc-EEec---CC
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSK-------------------KS---EAIERLGAD-SFLV---SR  236 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~-------------------~~---~~~~~~ga~-~~v~---~~  236 (314)
                      +.+|+|+|+|++|..+++.+...|. ++++++.+.-+                   .+   +.++++..+ .+..   .-
T Consensus        24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i  103 (240)
T TIGR02355        24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKL  103 (240)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            3779999999999999999999997 66666543211                   11   112222211 1111   11


Q ss_pred             CHHHHHHHcCCccEEEEccCCccc
Q 021300          237 DQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       237 ~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      +.+.+.++..++|+|+||+.+...
T Consensus       104 ~~~~~~~~~~~~DlVvd~~D~~~~  127 (240)
T TIGR02355       104 DDAELAALIAEHDIVVDCTDNVEV  127 (240)
T ss_pred             CHHHHHHHhhcCCEEEEcCCCHHH
Confidence            223445556789999999998763

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=95.40  E-value=0.12  Score=45.87  Aligned_cols=77  Identities=19%  Similarity=0.302  Sum_probs=54.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC---Cc---E---EecCCCHHH--------HHH
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---AD---S---FLVSRDQDE--------MQA  243 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g---a~---~---~v~~~~~~~--------~~~  243 (314)
                      -.|.++||.|+ .++|.+++..+...|++|++..+++++.++..+++.   ..   .   ..|-...+.        +++
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            46788899987 999999999999999999999999988766655432   21   1   123332222        112


Q ss_pred             HcCCccEEEEccCCc
Q 021300          244 AMGTMDGIIDTVSAV  258 (314)
Q Consensus       244 ~~~~~d~v~d~~g~~  258 (314)
                      ..+++|+.+++.|..
T Consensus        86 ~~GkidiLvnnag~~  100 (270)
T KOG0725|consen   86 FFGKIDILVNNAGAL  100 (270)
T ss_pred             hCCCCCEEEEcCCcC
Confidence            245799999998843

>PRK06487 glycerate dehydrogenase; Provisional

Probab=95.38  E-value=0.11  Score=47.12  Aligned_cols=35  Identities=29%  Similarity=0.548  Sum_probs=31.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      -.|.++.|+|.|.+|...++.++.+|++|+++.+.
T Consensus       146 l~gktvgIiG~G~IG~~vA~~l~~fgm~V~~~~~~  180 (317)
T PRK06487        146 LEGKTLGLLGHGELGGAVARLAEAFGMRVLIGQLP  180 (317)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCC
Confidence            35789999999999999999999999999988764

>PRK07102 short chain dehydrogenase; Provisional

Probab=95.38  E-value=0.13  Score=44.34  Aligned_cols=73  Identities=12%  Similarity=0.135  Sum_probs=49.9

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCcE-E--ecCCCHHHHHH----HcCCccEEE
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADS-F--LVSRDQDEMQA----AMGTMDGII  252 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----ga~~-~--v~~~~~~~~~~----~~~~~d~v~  252 (314)
                      .+++|.|+ |++|...++.+...|++|+++++++++...+.+.+    +... +  .|-.+++.+.+    ....+|+++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv   81 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL   81 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence            47899987 99999999999989999999999887665554432    1111 1  23344433333    333689999


Q ss_pred             EccCC
Q 021300          253 DTVSA  257 (314)
Q Consensus       253 d~~g~  257 (314)
                      .++|.
T Consensus        82 ~~ag~   86 (243)
T PRK07102         82 IAVGT   86 (243)
T ss_pred             ECCcC
Confidence            88774

>PLN02244 tocopherol O-methyltransferase

Probab=95.37  E-value=0.11  Score=47.81  Aligned_cols=96  Identities=22%  Similarity=0.226  Sum_probs=61.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCC-cE-EecCCCHHHHHHHcCCccEEEEccC
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGA-DS-FLVSRDQDEMQAAMGTMDGIIDTVS  256 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~ga-~~-~v~~~~~~~~~~~~~~~d~v~d~~g  256 (314)
                      +++++||=+|+|. |..+..+++..|++++.++.++...+.+.+   +.+. +. -+...+........+.||+|+-.-.
T Consensus       117 ~~~~~VLDiGCG~-G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~~~~~~~FD~V~s~~~  195 (340)
T PLN02244        117 KRPKRIVDVGCGI-GGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQPFEDGQFDLVWSMES  195 (340)
T ss_pred             CCCCeEEEecCCC-CHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccCCCCCCCccEEEECCc
Confidence            6889998899864 667778888789999999999876544432   2232 11 1111121111112346999886432


Q ss_pred             C------cccHHHHHHhhccCCEEEEEc
Q 021300          257 A------VHPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       257 ~------~~~~~~~~~~l~~~G~~v~~G  278 (314)
                      .      ...+..+.+.|++||++++..
T Consensus       196 ~~h~~d~~~~l~e~~rvLkpGG~lvi~~  223 (340)
T PLN02244        196 GEHMPDKRKFVQELARVAAPGGRIIIVT  223 (340)
T ss_pred             hhccCCHHHHHHHHHHHcCCCcEEEEEE
Confidence            1      124678899999999999864

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=95.37  E-value=0.17  Score=49.38  Aligned_cols=91  Identities=26%  Similarity=0.316  Sum_probs=63.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc-
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-  260 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~-  260 (314)
                      -.|.++.|+|.|.+|...++.++.+|++|+++++....  +..+++|...+      +.+.++....|+|+-+...... 
T Consensus       136 l~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~--~~~~~~g~~~~------~~l~ell~~aDvV~l~lPlt~~T  207 (525)
T TIGR01327       136 LYGKTLGVIGLGRIGSIVAKRAKAFGMKVLAYDPYISP--ERAEQLGVELV------DDLDELLARADFITVHTPLTPET  207 (525)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCh--hHHHhcCCEEc------CCHHHHHhhCCEEEEccCCChhh
Confidence            36789999999999999999999999999998874221  22245564321      1234555678998887763311 


Q ss_pred             ----HHHHHHhhccCCEEEEEcCC
Q 021300          261 ----LMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       261 ----~~~~~~~l~~~G~~v~~G~~  280 (314)
                          -...+..|+++..++.++..
T Consensus       208 ~~li~~~~l~~mk~ga~lIN~aRG  231 (525)
T TIGR01327       208 RGLIGAEELAKMKKGVIIVNCARG  231 (525)
T ss_pred             ccCcCHHHHhcCCCCeEEEEcCCC
Confidence                13567788888888888773

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.35  E-value=0.17  Score=44.97  Aligned_cols=97  Identities=19%  Similarity=0.211  Sum_probs=72.4

Q ss_pred             cccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 021300          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (314)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~  240 (314)
                      ..+||+..+.+..++....--.|.+++|+|. ..+|.=...++...+++|++.-......                    
T Consensus       136 ~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl--------------------  195 (282)
T PRK14180        136 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDL--------------------  195 (282)
T ss_pred             CcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCH--------------------
Confidence            3467777777777777664568999999996 8999999999998999987654433222                    


Q ss_pred             HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       241 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                       ++.+..+|+++-++|.+..+.  -+.+++|-.++.+|...
T Consensus       196 -~~~~k~ADIvIsAvGkp~~i~--~~~vk~gavVIDvGin~  233 (282)
T PRK14180        196 -KSHTTKADILIVAVGKPNFIT--ADMVKEGAVVIDVGINH  233 (282)
T ss_pred             -HHHhhhcCEEEEccCCcCcCC--HHHcCCCcEEEEecccc
Confidence             233455899999999886332  47889999999999753

>PRK06141 ornithine cyclodeaminase; Validated

Probab=95.34  E-value=0.35  Score=43.84  Aligned_cols=103  Identities=26%  Similarity=0.204  Sum_probs=67.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHH-CC-CeEEEEeCChhhHHHHHHHcCCc--EEecCCCHHHHHHHcCCccEEEEccCC
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKA-MG-VKVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~-~g-~~vi~v~~~~~~~~~~~~~~ga~--~~v~~~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      +...+++|+|+|..|...+..+.. .+ .++.++.+++++.+++++++...  .+....+   ..+....+|+|+.++++
T Consensus       123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~---~~~av~~aDIVi~aT~s  199 (314)
T PRK06141        123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTD---LEAAVRQADIISCATLS  199 (314)
T ss_pred             CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCC---HHHHHhcCCEEEEeeCC
Confidence            567889999999999988764443 55 48999999999888888776321  1122222   22344679999998876


Q ss_pred             cccHHHHHHhhccCCEEEEEcCCC-CCcccch
Q 021300          258 VHPLMPLIGLLKSQGKLVLVGAPE-KPLELPA  288 (314)
Q Consensus       258 ~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~  288 (314)
                      ...+ .-.+.++++-.+..+|... ...+++.
T Consensus       200 ~~pv-l~~~~l~~g~~i~~ig~~~~~~~El~~  230 (314)
T PRK06141        200 TEPL-VRGEWLKPGTHLDLVGNFTPDMRECDD  230 (314)
T ss_pred             CCCE-ecHHHcCCCCEEEeeCCCCcccccCCH
Confidence            5321 1125678877666777643 3345554

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.34  E-value=0.2  Score=52.34  Aligned_cols=76  Identities=20%  Similarity=0.290  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHC-CCe-------------EEEEeCChhhHHHHHHHc-CCcE-EecCCCHHHHHHHcC
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAM-GVK-------------VTVISTSPSKKSEAIERL-GADS-FLVSRDQDEMQAAMG  246 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~-g~~-------------vi~v~~~~~~~~~~~~~~-ga~~-~v~~~~~~~~~~~~~  246 (314)
                      ...+|+|+|+|.+|..++..+... +++             |++.+.+.++.+++++.+ +++. .+|..+.+.+.++..
T Consensus       568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~  647 (1042)
T PLN02819        568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS  647 (1042)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence            466899999999999999888754 334             666666777777777766 4433 345677776666656


Q ss_pred             CccEEEEccCCc
Q 021300          247 TMDGIIDTVSAV  258 (314)
Q Consensus       247 ~~d~v~d~~g~~  258 (314)
                      ++|+|+.++...
T Consensus       648 ~~DaVIsalP~~  659 (1042)
T PLN02819        648 QVDVVISLLPAS  659 (1042)
T ss_pred             CCCEEEECCCch
Confidence            799999998754

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=95.33  E-value=0.13  Score=43.21  Aligned_cols=94  Identities=19%  Similarity=0.169  Sum_probs=58.0

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCcEE-ecCCCHHHHHHHcCCccEEEEccC
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADSF-LVSRDQDEMQAAMGTMDGIIDTVS  256 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~g  256 (314)
                      ..++.+||-+|+|. |..+..+++. |.+|++++.++...+.+.+   ..+...+ +...+.... ...+.||+|+....
T Consensus        28 ~~~~~~vLDiGcG~-G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~I~~~~~  104 (197)
T PRK11207         28 VVKPGKTLDLGCGN-GRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNL-TFDGEYDFILSTVV  104 (197)
T ss_pred             cCCCCcEEEECCCC-CHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhC-CcCCCcCEEEEecc
Confidence            45678899999875 7777788774 8899999999875544332   2232211 111111111 12346999987643


Q ss_pred             C--------cccHHHHHHhhccCCEEEEE
Q 021300          257 A--------VHPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       257 ~--------~~~~~~~~~~l~~~G~~v~~  277 (314)
                      -        ...+..+.+.|+++|+++.+
T Consensus       105 ~~~~~~~~~~~~l~~i~~~LkpgG~~~~~  133 (197)
T PRK11207        105 LMFLEAKTIPGLIANMQRCTKPGGYNLIV  133 (197)
T ss_pred             hhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            1        12366788889999996554

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=95.33  E-value=0.13  Score=49.52  Aligned_cols=73  Identities=15%  Similarity=0.269  Sum_probs=53.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~  259 (314)
                      ..+.+++|+|+|++|.+++..+...|++++++.++.++.+++.++++... +...+   ... ...+|++++|+....
T Consensus       330 ~~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~~-~~~~~---~~~-l~~~DiVInatP~g~  402 (477)
T PRK09310        330 LNNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGKA-FPLES---LPE-LHRIDIIINCLPPSV  402 (477)
T ss_pred             cCCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccce-echhH---hcc-cCCCCEEEEcCCCCC
Confidence            46788999999999999999999999999888888887777776655322 22111   111 246999999987543

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=95.32  E-value=0.3  Score=44.11  Aligned_cols=37  Identities=24%  Similarity=0.302  Sum_probs=30.4

Q ss_pred             CCCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCChhh
Q 021300          182 KPGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPSK  219 (314)
Q Consensus       182 ~~g~~vlI~Ga---g~vG~~a~~~a~~~g~~vi~v~~~~~~  219 (314)
                      -.|.++||.|+   +++|.++++.+...|++|++ .+..++
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~   46 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPA   46 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcch
Confidence            35789999988   88999999999999999988 554333

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=95.31  E-value=0.27  Score=45.19  Aligned_cols=91  Identities=15%  Similarity=0.169  Sum_probs=58.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCh-hhHHHHHHHcCCcE---------------EecCCCHHHHHHHcCCc
Q 021300          186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSP-SKKSEAIERLGADS---------------FLVSRDQDEMQAAMGTM  248 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~-~~~~~~~~~~ga~~---------------~v~~~~~~~~~~~~~~~  248 (314)
                      +|.|+|.|.+|...++.+... +.+++.+.... +....+++++|.+.               +....+   ..++..++
T Consensus         3 kVaI~G~GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~---~~el~~~v   79 (341)
T PRK04207          3 KVGVNGYGTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGT---IEDLLEKA   79 (341)
T ss_pred             EEEEECCCHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCC---hhHhhccC
Confidence            588999999999988887754 56888776643 33444455454321               111122   22333579


Q ss_pred             cEEEEccCCcccHHHHHHhhccCCEEEEEcC
Q 021300          249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       249 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      |+|+||++.......+..+++.|-++++-|.
T Consensus        80 DVVIdaT~~~~~~e~a~~~~~aGk~VI~~~~  110 (341)
T PRK04207         80 DIVVDATPGGVGAKNKELYEKAGVKAIFQGG  110 (341)
T ss_pred             CEEEECCCchhhHHHHHHHHHCCCEEEEcCC
Confidence            9999999987666666667777756666655

>PRK08309 short chain dehydrogenase; Provisional

Probab=95.31  E-value=0.57  Score=38.69  Aligned_cols=96  Identities=20%  Similarity=0.193  Sum_probs=57.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--cE-E--ecCCCHHHHHHH-------cCCccEEEE
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DS-F--LVSRDQDEMQAA-------MGTMDGIID  253 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~~-~--v~~~~~~~~~~~-------~~~~d~v~d  253 (314)
                      +++|.|++++|...++.+...|++|++.++++++.+++...++.  .. .  .|..+++.+.+.       .+.+|.+|+
T Consensus         2 ~vlVtGGtG~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv~   81 (177)
T PRK08309          2 HALVIGGTGMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAVA   81 (177)
T ss_pred             EEEEECcCHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence            57888884455556666666799999999988776666544431  11 1  356665433322       246899998


Q ss_pred             ccCCcccHHHHHHhhccCC------EEEEE-cCCCC
Q 021300          254 TVSAVHPLMPLIGLLKSQG------KLVLV-GAPEK  282 (314)
Q Consensus       254 ~~g~~~~~~~~~~~l~~~G------~~v~~-G~~~~  282 (314)
                      .+-... ......+.+..|      +++.+ |+...
T Consensus        82 ~vh~~~-~~~~~~~~~~~gv~~~~~~~~h~~gs~~~  116 (177)
T PRK08309         82 WIHSSA-KDALSVVCRELDGSSETYRLFHVLGSAAS  116 (177)
T ss_pred             eccccc-hhhHHHHHHHHccCCCCceEEEEeCCcCC
Confidence            876543 445555555444      34444 66553

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=95.29  E-value=0.17  Score=44.10  Aligned_cols=75  Identities=17%  Similarity=0.314  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcE---EecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~---~v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.++||.|+ +.+|...+..+...|++++++.++.+..+++.++   .+.+.   ..|-.+.+.+.+.       .+.+
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   89 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV   89 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4788999987 9999999999999999999998887665544333   23322   2344444433221       2468


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |+++.+.|.
T Consensus        90 d~li~~ag~   98 (255)
T PRK06113         90 DILVNNAGG   98 (255)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.29  E-value=0.12  Score=45.25  Aligned_cols=75  Identities=15%  Similarity=0.298  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCh--hhHHHHHHHcCCc--E-EecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP--SKKSEAIERLGAD--S-FLVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga---g~vG~~a~~~a~~~g~~vi~v~~~~--~~~~~~~~~~ga~--~-~v~~~~~~~~~~~-------~~~  247 (314)
                      .+.+++|.|+   +++|.+.++.+...|++|+++.++.  +..+++.++++..  . ..|-.+++.+.++       .+.
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999885   7999999998888999999887653  3345555555432  1 1344444332222       247


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++++++|.
T Consensus        86 iD~li~nAG~   95 (256)
T PRK07889         86 LDGVVHSIGF   95 (256)
T ss_pred             CcEEEEcccc
Confidence            9999998874

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=95.28  E-value=0.29  Score=44.21  Aligned_cols=91  Identities=16%  Similarity=0.185  Sum_probs=59.9

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHc-------CCcEEecCCCHHHHHHHcCCccEEEEccC
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERL-------GADSFLVSRDQDEMQAAMGTMDGIIDTVS  256 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~-------ga~~~v~~~~~~~~~~~~~~~d~v~d~~g  256 (314)
                      +|.|+|+|.+|..++..+...|.  +++++++++++.+.++..+       +....+...+.+    ...++|++|.++|
T Consensus         2 kI~IIGaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~----~l~~aDIVIitag   77 (306)
T cd05291           2 KVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYS----DCKDADIVVITAG   77 (306)
T ss_pred             EEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHH----HhCCCCEEEEccC
Confidence            68899999999999998888884  7888998877766555544       222112222221    2368999999998


Q ss_pred             Ccc---------------cHHH---HHHhhccCCEEEEEcCC
Q 021300          257 AVH---------------PLMP---LIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       257 ~~~---------------~~~~---~~~~l~~~G~~v~~G~~  280 (314)
                      .+.               .+..   .+....+.+.++.++.|
T Consensus        78 ~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP  119 (306)
T cd05291          78 APQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNP  119 (306)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCh
Confidence            631               1222   23334567888888754

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK07775 short chain dehydrogenase; Provisional

Probab=95.28  E-value=0.18  Score=44.52  Aligned_cols=74  Identities=19%  Similarity=0.291  Sum_probs=50.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcEE---ecCCCHHHHHHH-------cCCcc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MGTMD  249 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~~---v~~~~~~~~~~~-------~~~~d  249 (314)
                      ..+++|.|+ |.+|...++.+...|++|+++.++.++..++.++   .+....   .|-.+.+.+.++       .+++|
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   89 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIE   89 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            457899997 9999999999988999999988877655444332   243322   244444433322       24689


Q ss_pred             EEEEccCC
Q 021300          250 GIIDTVSA  257 (314)
Q Consensus       250 ~v~d~~g~  257 (314)
                      .+|.++|.
T Consensus        90 ~vi~~Ag~   97 (274)
T PRK07775         90 VLVSGAGD   97 (274)
T ss_pred             EEEECCCc
Confidence            99999874

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.26  E-value=0.15  Score=40.43  Aligned_cols=94  Identities=23%  Similarity=0.320  Sum_probs=53.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhH----------------------HHHHHHcC-CcEEecC---CCH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKK----------------------SEAIERLG-ADSFLVS---RDQ  238 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~----------------------~~~~~~~g-a~~~v~~---~~~  238 (314)
                      +|+|+|+|++|...++.+...|. ++++++...-+.                      .+..+++. ...+...   -..
T Consensus         1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~   80 (143)
T cd01483           1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE   80 (143)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh
Confidence            48899999999999999999998 666665441111                      11112222 1111111   111


Q ss_pred             HHHHHHcCCccEEEEccCCcccHHHHHHhhccCCE-EEEEcC
Q 021300          239 DEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGK-LVLVGA  279 (314)
Q Consensus       239 ~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~-~v~~G~  279 (314)
                      +...+...++|+|++|..+........+..+..+. ++..|.
T Consensus        81 ~~~~~~~~~~diVi~~~d~~~~~~~l~~~~~~~~i~~i~~~~  122 (143)
T cd01483          81 DNLDDFLDGVDLVIDAIDNIAVRRALNRACKELGIPVIDAGG  122 (143)
T ss_pred             hhHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence            22234456899999999886543444455555554 444444

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK08328 hypothetical protein; Provisional

Probab=95.26  E-value=0.14  Score=44.37  Aligned_cols=32  Identities=38%  Similarity=0.664  Sum_probs=27.0

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeC
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVIST  215 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~  215 (314)
                      +.+|+|+|+|++|..+++.+...|. ++++++.
T Consensus        27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~   59 (231)
T PRK08328         27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDE   59 (231)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            4679999999999999999999998 5666653

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=95.24  E-value=0.13  Score=44.43  Aligned_cols=77  Identities=16%  Similarity=0.286  Sum_probs=51.7

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc--EEe--cCC--CHHH-------HHH
Q 021300          181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD--SFL--VSR--DQDE-------MQA  243 (314)
Q Consensus       181 ~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~--~~v--~~~--~~~~-------~~~  243 (314)
                      ..++.++||.|+ |.+|...++.+...|++|+++.++.++..++.+++   +..  .++  +-.  +.+.       +.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            457889999987 99999999988888999999999887654544333   221  111  221  2222       222


Q ss_pred             HcCCccEEEEccCC
Q 021300          244 AMGTMDGIIDTVSA  257 (314)
Q Consensus       244 ~~~~~d~v~d~~g~  257 (314)
                      ..+.+|.+|.++|.
T Consensus        89 ~~~~id~vi~~Ag~  102 (247)
T PRK08945         89 QFGRLDGVLHNAGL  102 (247)
T ss_pred             HhCCCCEEEECCcc
Confidence            23469999998864

>PRK08303 short chain dehydrogenase; Provisional

Probab=95.24  E-value=0.17  Score=45.72  Aligned_cols=74  Identities=20%  Similarity=0.242  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh----------hhHHHHH---HHcCCcEE---ecCCCHHHHHH--
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP----------SKKSEAI---ERLGADSF---LVSRDQDEMQA--  243 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~----------~~~~~~~---~~~ga~~~---v~~~~~~~~~~--  243 (314)
                      .|.++||.|+ +++|.++++.+...|++|+++.++.          ++.+++.   +..+....   .|-.+++.+..  
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   86 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV   86 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            4678999987 9999999999999999999988863          2333332   33343222   23344433222  


Q ss_pred             -----HcCCccEEEEcc-C
Q 021300          244 -----AMGTMDGIIDTV-S  256 (314)
Q Consensus       244 -----~~~~~d~v~d~~-g  256 (314)
                           ..+.+|++|+++ |
T Consensus        87 ~~~~~~~g~iDilVnnA~g  105 (305)
T PRK08303         87 ERIDREQGRLDILVNDIWG  105 (305)
T ss_pred             HHHHHHcCCccEEEECCcc
Confidence                 224699999988 6

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.24  E-value=0.17  Score=44.20  Aligned_cols=78  Identities=31%  Similarity=0.438  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChh-------------------hHH---HHHHHcCC-cEEecC---
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS-------------------KKS---EAIERLGA-DSFLVS---  235 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~-------------------~~~---~~~~~~ga-~~~v~~---  235 (314)
                      ...+|+|+|+|++|..+++.+...|. ++++++.+.-                   +.+   +.++++.. ..+...   
T Consensus        31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~  110 (245)
T PRK05690         31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINAR  110 (245)
T ss_pred             cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEecc
Confidence            34789999999999999999999997 6666654311                   111   11122221 111111   


Q ss_pred             CCHHHHHHHcCCccEEEEccCCccc
Q 021300          236 RDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       236 ~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      -+++...+....+|+||+|+.+...
T Consensus       111 i~~~~~~~~~~~~DiVi~~~D~~~~  135 (245)
T PRK05690        111 LDDDELAALIAGHDLVLDCTDNVAT  135 (245)
T ss_pred             CCHHHHHHHHhcCCEEEecCCCHHH
Confidence            1123344555689999999987753

>PRK01581 speE spermidine synthase; Validated

Probab=95.23  E-value=0.31  Score=44.84  Aligned_cols=96  Identities=15%  Similarity=0.128  Sum_probs=60.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcC-----------Cc--EEecCCCHHHHHHHcCC
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLG-----------AD--SFLVSRDQDEMQAAMGT  247 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~g-----------a~--~~v~~~~~~~~~~~~~~  247 (314)
                      ....+|||+|+| .|..+..+++..+ .++++++.+++-. ++++++.           ..  .++..+..+++....+.
T Consensus       149 ~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVI-elAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~~~~~  226 (374)
T PRK01581        149 IDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMI-NMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSSPSSL  226 (374)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHH-HHHHhccccchhccccCCCCceEEEECcHHHHHHhcCCC
Confidence            445699999975 4667777777654 4787888777655 4445421           01  12222223445444557


Q ss_pred             ccEEEEccCCc-----------ccHHHHHHhhccCCEEEEEcC
Q 021300          248 MDGIIDTVSAV-----------HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       248 ~d~v~d~~g~~-----------~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      ||+||--..++           ..+..+.+.|+++|.++.-..
T Consensus       227 YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~  269 (374)
T PRK01581        227 YDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQSN  269 (374)
T ss_pred             ccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence            99988665332           136678899999999877644

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.23  E-value=0.31  Score=44.29  Aligned_cols=85  Identities=16%  Similarity=0.170  Sum_probs=54.2

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH----------cCCc------EEecCCCHHHHHHHcCCc
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----------LGAD------SFLVSRDQDEMQAAMGTM  248 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~----------~ga~------~~v~~~~~~~~~~~~~~~  248 (314)
                      .+|.|+|+|.+|...++.+...|.+|++++.+++...++.+.          .+..      .+-..   ..+.+...++
T Consensus         8 ~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~---~~l~~av~~a   84 (321)
T PRK07066          8 KTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFV---ATIEACVADA   84 (321)
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceec---CCHHHHhcCC
Confidence            579999999999999999999999999999988755443221          1110      00000   1123445689


Q ss_pred             cEEEEccCCcc-----cHHHHHHhhccCC
Q 021300          249 DGIIDTVSAVH-----PLMPLIGLLKSQG  272 (314)
Q Consensus       249 d~v~d~~g~~~-----~~~~~~~~l~~~G  272 (314)
                      |+|++++....     .+..+.+.++++-
T Consensus        85 DlViEavpE~l~vK~~lf~~l~~~~~~~a  113 (321)
T PRK07066         85 DFIQESAPEREALKLELHERISRAAKPDA  113 (321)
T ss_pred             CEEEECCcCCHHHHHHHHHHHHHhCCCCe
Confidence            99999987542     2333444555543

>PRK08264 short chain dehydrogenase; Validated

Probab=95.21  E-value=0.13  Score=44.09  Aligned_cols=71  Identities=25%  Similarity=0.329  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCc--E-EecCCCHHHHHHHc---CCccEEEEc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGAD--S-FLVSRDQDEMQAAM---GTMDGIIDT  254 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~--~-~v~~~~~~~~~~~~---~~~d~v~d~  254 (314)
                      .+.+++|.|+ |.+|...++.+...|+ +|+++.+++++..+    .+.+  . ..|-.+++.+.+..   +.+|++|.+
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   80 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN   80 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence            4578999987 9999999999999999 99999988765432    3322  1 13445555444433   358999999


Q ss_pred             cCC
Q 021300          255 VSA  257 (314)
Q Consensus       255 ~g~  257 (314)
                      .|.
T Consensus        81 ag~   83 (238)
T PRK08264         81 AGI   83 (238)
T ss_pred             CCc
Confidence            886

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=95.21  E-value=0.18  Score=43.47  Aligned_cols=74  Identities=20%  Similarity=0.341  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      ++.++||.|+ |.+|...++.+...|++|++++++.++..++.+.+   +.+..   .|-.+.+.+.++       .+.+
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3678999997 99999999999999999999998877665553332   32221   233444333322       2468


Q ss_pred             cEEEEccC
Q 021300          249 DGIIDTVS  256 (314)
Q Consensus       249 d~v~d~~g  256 (314)
                      |++|.+.|
T Consensus        82 d~vi~~ag   89 (250)
T TIGR03206        82 DVLVNNAG   89 (250)
T ss_pred             CEEEECCC
Confidence            99999987

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=95.21  E-value=0.13  Score=46.54  Aligned_cols=74  Identities=26%  Similarity=0.360  Sum_probs=57.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHH--HHHHcC-Cc---EE--ecCCCHHHHHHHcCCccEEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSE--AIERLG-AD---SF--LVSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~--~~~~~g-a~---~~--v~~~~~~~~~~~~~~~d~v~d  253 (314)
                      .+.+|+|.|| |-+|...+..+..+|++|..++|+++....  .++++. +.   .+  -|-.+++.+.+...++|.||.
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH   84 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH   84 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence            5788999998 999999999999999999999999886433  355665 32   11  233455677777889999999


Q ss_pred             ccC
Q 021300          254 TVS  256 (314)
Q Consensus       254 ~~g  256 (314)
                      ++.
T Consensus        85 ~As   87 (327)
T KOG1502|consen   85 TAS   87 (327)
T ss_pred             eCc
Confidence            876

>PRK04148 hypothetical protein; Provisional

Probab=95.18  E-value=0.5  Score=37.04  Aligned_cols=97  Identities=16%  Similarity=0.175  Sum_probs=61.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecC-CCHHHHHHHcCCccEEEEccCCccc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS-RDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~-~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      +.+.+++++|.| .|...+..++..|.+|++++.++...+.+ ++.+.+.+.+. -+++  .++-+++|+++..-.....
T Consensus        15 ~~~~kileIG~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a-~~~~~~~v~dDlf~p~--~~~y~~a~liysirpp~el   90 (134)
T PRK04148         15 GKNKKIVELGIG-FYFKVAKKLKESGFDVIVIDINEKAVEKA-KKLGLNAFVDDLFNPN--LEIYKNAKLIYSIRPPRDL   90 (134)
T ss_pred             ccCCEEEEEEec-CCHHHHHHHHHCCCEEEEEECCHHHHHHH-HHhCCeEEECcCCCCC--HHHHhcCCEEEEeCCCHHH
Confidence            567889999998 78755556667899999999999877656 45565544332 1111  1344678999988776664


Q ss_pred             HHHHHHhhcc-CCEEEEEcCCCC
Q 021300          261 LMPLIGLLKS-QGKLVLVGAPEK  282 (314)
Q Consensus       261 ~~~~~~~l~~-~G~~v~~G~~~~  282 (314)
                      ....+++.++ +..++..-..++
T Consensus        91 ~~~~~~la~~~~~~~~i~~l~~e  113 (134)
T PRK04148         91 QPFILELAKKINVPLIIKPLSGE  113 (134)
T ss_pred             HHHHHHHHHHcCCCEEEEcCCCC
Confidence            4445555444 444555433333

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=95.17  E-value=0.2  Score=44.40  Aligned_cols=87  Identities=17%  Similarity=0.258  Sum_probs=55.6

Q ss_pred             CEEEEEcCChHHHHHHHHHHH--CCCeEE-EEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300          185 MHVGVVGLGGLGHVAVKFAKA--MGVKVT-VISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~--~g~~vi-~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~  261 (314)
                      -+|.|+|.|.+|...++.+..  .+.+++ +.++++++.+++.+++|....+  .+.+.   +....|+|++|++.....
T Consensus         7 irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~--~~~ee---ll~~~D~Vvi~tp~~~h~   81 (271)
T PRK13302          7 LRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPV--VPLDQ---LATHADIVVEAAPASVLR   81 (271)
T ss_pred             eEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCccc--CCHHH---HhcCCCEEEECCCcHHHH
Confidence            468899999999988877765  366776 4456666666777777743222  22222   234578888888876545


Q ss_pred             HHHHHhhccCCEEEE
Q 021300          262 MPLIGLLKSQGKLVL  276 (314)
Q Consensus       262 ~~~~~~l~~~G~~v~  276 (314)
                      +....+|+.+--++.
T Consensus        82 e~~~~aL~aGk~Vi~   96 (271)
T PRK13302         82 AIVEPVLAAGKKAIV   96 (271)
T ss_pred             HHHHHHHHcCCcEEE
Confidence            555666665544443

>PRK06114 short chain dehydrogenase; Provisional

Probab=95.17  E-value=0.21  Score=43.47  Aligned_cols=75  Identities=17%  Similarity=0.250  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhh-HHHHHH---HcCCcE---EecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIE---RLGADS---FLVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~-~~~~~~---~~ga~~---~v~~~~~~~~~~~-------~~~  247 (314)
                      .+.++||.|+ +++|..+++.+...|++++++.++.++ ..++.+   ..+.+.   ..|-.+++.+.+.       .+.
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 999999999999999999998876532 233322   224322   1233444332222       246


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|.+.|.
T Consensus        87 id~li~~ag~   96 (254)
T PRK06114         87 LTLAVNAAGI   96 (254)
T ss_pred             CCEEEECCCC
Confidence            8999999984

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.16  E-value=0.55  Score=40.89  Aligned_cols=33  Identities=18%  Similarity=0.209  Sum_probs=28.0

Q ss_pred             CCCCEEEEEcCC---hHHHHHHHHHHHCCCeEEEEe
Q 021300          182 KPGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVIS  214 (314)
Q Consensus       182 ~~g~~vlI~Gag---~vG~~a~~~a~~~g~~vi~v~  214 (314)
                      -+|.++||.|++   ++|...+..+...|++++++.
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~   39 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTY   39 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEe
Confidence            357899999983   799999999999999998864

>PRK09135 pteridine reductase; Provisional

Probab=95.14  E-value=0.15  Score=43.82  Aligned_cols=74  Identities=15%  Similarity=0.208  Sum_probs=48.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHc----CCc---EEecCCCHHHHHHH-------cC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERL----GAD---SFLVSRDQDEMQAA-------MG  246 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~~~~~----ga~---~~v~~~~~~~~~~~-------~~  246 (314)
                      .+.++||.|+ |.+|..+++.+...|++|+++.++.. ...++.+.+    +..   ...|-.+.+.+..+       .+
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4578999997 99999999998889999999988643 233332222    111   12244444433322       24


Q ss_pred             CccEEEEccC
Q 021300          247 TMDGIIDTVS  256 (314)
Q Consensus       247 ~~d~v~d~~g  256 (314)
                      .+|++|.++|
T Consensus        85 ~~d~vi~~ag   94 (249)
T PRK09135         85 RLDALVNNAS   94 (249)
T ss_pred             CCCEEEECCC
Confidence            6899999987

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.14  E-value=0.17  Score=48.20  Aligned_cols=73  Identities=21%  Similarity=0.215  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHH---HHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS---EAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~---~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~  258 (314)
                      .|.+++|+|+|.+|++++.+++..|++|++.+.......   ...++.|.+.....+..+.   ...++|+|+.+.|-.
T Consensus         4 ~~k~v~v~G~g~~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~~~~---~~~~~d~vV~s~gi~   79 (447)
T PRK02472          4 QNKKVLVLGLAKSGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHPLEL---LDEDFDLMVKNPGIP   79 (447)
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCCHHH---hcCcCCEEEECCCCC
Confidence            367899999988999999999999999999876542211   2224556654432333222   122589999988743

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.14  E-value=0.22  Score=44.23  Aligned_cols=96  Identities=17%  Similarity=0.187  Sum_probs=71.3

Q ss_pred             ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (314)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~  241 (314)
                      .+||+..+....++....--.|.+++|+|. ..+|.=...++...+++|++.-.....                     +
T Consensus       135 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~---------------------l  193 (282)
T PRK14169        135 VVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRN---------------------L  193 (282)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCC---------------------H
Confidence            467777777777776664468999999996 899999999999999988765333221                     2


Q ss_pred             HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      .+....+|+++-++|.+..  ---+.+++|-.++.+|...
T Consensus       194 ~~~~~~ADIvI~AvG~p~~--i~~~~vk~GavVIDvGin~  231 (282)
T PRK14169        194 KQLTKEADILVVAVGVPHF--IGADAVKPGAVVIDVGISR  231 (282)
T ss_pred             HHHHhhCCEEEEccCCcCc--cCHHHcCCCcEEEEeeccc
Confidence            2344558899999998863  2356889999999999754

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=95.14  E-value=0.15  Score=46.17  Aligned_cols=74  Identities=23%  Similarity=0.230  Sum_probs=52.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCC---cE---EecCCCHHHHH----HH---cCCc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGA---DS---FLVSRDQDEMQ----AA---MGTM  248 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~ga---~~---~v~~~~~~~~~----~~---~~~~  248 (314)
                      +.++||.|+ +++|...++.+...| ++|+++.++.++.+++.+++..   ..   ..|-.+.+.+.    ++   .+++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            568899998 999999998888889 8999999988777666666542   11   13444443322    22   2469


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|.++|.
T Consensus        83 D~lI~nAG~   91 (314)
T TIGR01289        83 DALVCNAAV   91 (314)
T ss_pred             CEEEECCCc
Confidence            999999873

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=95.12  E-value=0.19  Score=43.98  Aligned_cols=74  Identities=16%  Similarity=0.205  Sum_probs=48.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-ChhhHHHHHHH----cCCcE---EecCCCHHHHHHH-------cC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIER----LGADS---FLVSRDQDEMQAA-------MG  246 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~-~~~~~~~~~~~----~ga~~---~v~~~~~~~~~~~-------~~  246 (314)
                      +|.++||.|+ +++|...+..+...|++|+++.+ ++++.+.+.++    .+.+.   ..|-.+++.+.++       .+
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   86 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            5789999997 99999999999999999988765 34433333322    23321   1244444433222       24


Q ss_pred             CccEEEEccC
Q 021300          247 TMDGIIDTVS  256 (314)
Q Consensus       247 ~~d~v~d~~g  256 (314)
                      .+|+++.++|
T Consensus        87 ~id~lv~nAg   96 (260)
T PRK08416         87 RVDFFISNAI   96 (260)
T ss_pred             CccEEEECcc
Confidence            6899999885

>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]

Probab=95.11  E-value=0.32  Score=45.18  Aligned_cols=60  Identities=25%  Similarity=0.297  Sum_probs=44.5

Q ss_pred             cccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh
Q 021300          158 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS  218 (314)
Q Consensus       158 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~  218 (314)
                      .++|.+..+.+.+- .++...+.--.|.+|.|-|.|.+|..+++.+...|++++++.++..
T Consensus       182 r~~aTg~Gv~~~~~-~a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GAkvva~sds~g  241 (411)
T COG0334         182 RSEATGYGVFYAIR-EALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGAKVVAVSDSKG  241 (411)
T ss_pred             CCcccceehHHHHH-HHHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence            34444444443333 4455444225899999999999999999999888999999998877

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.11  E-value=0.21  Score=44.43  Aligned_cols=96  Identities=21%  Similarity=0.253  Sum_probs=70.9

Q ss_pred             ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (314)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~  241 (314)
                      .+||+..+....|+..+.--.|.+++|+|. ..+|.=...++...+++|++.-+....                     +
T Consensus       134 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~---------------------l  192 (287)
T PRK14173        134 LEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQD---------------------L  192 (287)
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence            467777777777776664457999999996 999999999999899988765433222                     2


Q ss_pred             HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      .+....+|+++-++|.+..+  --+.+++|-.++.+|...
T Consensus       193 ~~~~~~ADIvIsAvGkp~~i--~~~~vk~GavVIDVGin~  230 (287)
T PRK14173        193 PAVTRRADVLVVAVGRPHLI--TPEMVRPGAVVVDVGINR  230 (287)
T ss_pred             HHHHhhCCEEEEecCCcCcc--CHHHcCCCCEEEEccCcc
Confidence            23445588999999987633  356788899999998764

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=95.11  E-value=0.17  Score=44.64  Aligned_cols=85  Identities=21%  Similarity=0.313  Sum_probs=57.2

Q ss_pred             EEEEEcCChHHHHHHHHHHHCC---CeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMG---VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM  262 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g---~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~  262 (314)
                      ++.|+|+|.+|...+..+...|   .+++++++++++.+++.+.+|... .  .+.+   +.....|+||-++.... +.
T Consensus         4 ~I~iIG~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~-~--~~~~---~~~~~advVil~v~~~~-~~   76 (267)
T PRK11880          4 KIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRA-A--TDNQ---EAAQEADVVVLAVKPQV-ME   76 (267)
T ss_pred             EEEEEechHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCee-c--CChH---HHHhcCCEEEEEcCHHH-HH
Confidence            5889999999998888877777   578888998887777766666532 1  1211   22346889998887654 55


Q ss_pred             HHHHhhcc--CCEEEEE
Q 021300          263 PLIGLLKS--QGKLVLV  277 (314)
Q Consensus       263 ~~~~~l~~--~G~~v~~  277 (314)
                      ..++.+++  +..++.+
T Consensus        77 ~v~~~l~~~~~~~vvs~   93 (267)
T PRK11880         77 EVLSELKGQLDKLVVSI   93 (267)
T ss_pred             HHHHHHHhhcCCEEEEe
Confidence            66655554  2344444

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=95.10  E-value=0.16  Score=44.94  Aligned_cols=86  Identities=14%  Similarity=0.220  Sum_probs=49.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHHH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  264 (314)
                      +|.|+|.|.+|...++..... +.++..+...+.......+.++.. +....+.+.+   ...+|+|++|++.....+.+
T Consensus         3 rVgIiG~G~iG~~~~~~l~~~~~~~l~~v~~~~~~~~~~~~~~~~~-~~~~~d~~~l---~~~~DvVve~t~~~~~~e~~   78 (265)
T PRK13303          3 KVAMIGFGAIGAAVLELLEHDPDLRVDWVIVPEHSIDAVRRALGEA-VRVVSSVDAL---PQRPDLVVECAGHAALKEHV   78 (265)
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCceEEEEEEcCCCHHHHhhhhccC-CeeeCCHHHh---ccCCCEEEECCCHHHHHHHH
Confidence            688999999999888877765 456655553333222332333221 1122333322   34678888888766545556


Q ss_pred             HHhhccCCEEE
Q 021300          265 IGLLKSQGKLV  275 (314)
Q Consensus       265 ~~~l~~~G~~v  275 (314)
                      ..+|+.|--++
T Consensus        79 ~~aL~aGk~Vv   89 (265)
T PRK13303         79 VPILKAGIDCA   89 (265)
T ss_pred             HHHHHcCCCEE
Confidence            66665544444

>PRK08278 short chain dehydrogenase; Provisional

Probab=95.10  E-value=0.22  Score=44.01  Aligned_cols=75  Identities=24%  Similarity=0.349  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhh-------HHHHH---HHcCCcEE---ecCCCHHHHHHH----
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-------KSEAI---ERLGADSF---LVSRDQDEMQAA----  244 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~-------~~~~~---~~~ga~~~---v~~~~~~~~~~~----  244 (314)
                      .+.++||.|+ |++|...++.+...|++++++.++.+.       ..++.   +..+.+..   .|-.+++.+.+.    
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   84 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA   84 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            4578999997 999999999998899999999887542       22222   23343321   344444433322    


Q ss_pred             ---cCCccEEEEccCC
Q 021300          245 ---MGTMDGIIDTVSA  257 (314)
Q Consensus       245 ---~~~~d~v~d~~g~  257 (314)
                         .+.+|++|.++|.
T Consensus        85 ~~~~g~id~li~~ag~  100 (273)
T PRK08278         85 VERFGGIDICVNNASA  100 (273)
T ss_pred             HHHhCCCCEEEECCCC
Confidence               2479999999874

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.08  E-value=0.11  Score=46.36  Aligned_cols=75  Identities=20%  Similarity=0.268  Sum_probs=50.2

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc------CCcE-EecCCC----------HHHHHHHcCC
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL------GADS-FLVSRD----------QDEMQAAMGT  247 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~------ga~~-~v~~~~----------~~~~~~~~~~  247 (314)
                      .+|.|+|+|.+|...++.+...|.+|+++++++++.+++.+..      +.+. .++..+          .+.+.+....
T Consensus         2 ~~V~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~   81 (288)
T PRK09260          2 EKLVVVGAGVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVAD   81 (288)
T ss_pred             cEEEEECccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhcC
Confidence            4688999999999999988888999999999988776654321      1100 000000          0112234457


Q ss_pred             ccEEEEccCCcc
Q 021300          248 MDGIIDTVSAVH  259 (314)
Q Consensus       248 ~d~v~d~~g~~~  259 (314)
                      .|+||+|+....
T Consensus        82 aD~Vi~avpe~~   93 (288)
T PRK09260         82 ADLVIEAVPEKL   93 (288)
T ss_pred             CCEEEEeccCCH
Confidence            999999998653

>PRK06924 short chain dehydrogenase; Provisional

Probab=95.07  E-value=0.28  Score=42.37  Aligned_cols=44  Identities=23%  Similarity=0.262  Sum_probs=33.9

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh-hhHHHHHHHcC
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAIERLG  228 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~-~~~~~~~~~~g  228 (314)
                      +++||.|+ |.+|...++.+...|++|+++.+.+ ++...+.++.+
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~   47 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYN   47 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccC
Confidence            36889987 9999999999988899999999876 44444444333

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=95.06  E-value=0.14  Score=43.48  Aligned_cols=44  Identities=25%  Similarity=0.438  Sum_probs=34.1

Q ss_pred             EEEEEcCChHHHHHHHHHHHC--CC-eEEEEeCChhhHHHHHHHcCC
Q 021300          186 HVGVVGLGGLGHVAVKFAKAM--GV-KVTVISTSPSKKSEAIERLGA  229 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~--g~-~vi~v~~~~~~~~~~~~~~ga  229 (314)
                      +|.|+|+|.+|...+.+.+.-  .. .+++.+++.++..++.+.++.
T Consensus         2 ~vgiVGcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~   48 (255)
T COG1712           2 KVGIVGCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGR   48 (255)
T ss_pred             eEEEEeccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCC
Confidence            477899999999999998853  45 566777888888777777665

>PRK04266 fibrillarin; Provisional

Probab=95.06  E-value=0.39  Score=41.39  Aligned_cols=97  Identities=20%  Similarity=0.198  Sum_probs=59.2

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHc----CCcEEe-cCCCHHHHHHHcCCccEEEE
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERL----GADSFL-VSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~----ga~~~v-~~~~~~~~~~~~~~~d~v~d  253 (314)
                      .+++|++||=+|+|+ |..+..+++..+ .+|+.++.+++..+.+.+..    +...+. +...+.....+.+.+|+++-
T Consensus        69 ~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~~~~~l~~~~D~i~~  147 (226)
T PRK04266         69 PIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPERYAHVVEKVDVIYQ  147 (226)
T ss_pred             CCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcchhhhccccCCEEEE
Confidence            478999998888754 445566666653 58999999987655443321    122221 11111111223356999996


Q ss_pred             ccCCcc----cHHHHHHhhccCCEEEEE
Q 021300          254 TVSAVH----PLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       254 ~~g~~~----~~~~~~~~l~~~G~~v~~  277 (314)
                      ......    .+..+.+.|++||+++..
T Consensus       148 d~~~p~~~~~~L~~~~r~LKpGG~lvI~  175 (226)
T PRK04266        148 DVAQPNQAEIAIDNAEFFLKDGGYLLLA  175 (226)
T ss_pred             CCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence            444321    256788899999999983

>PLN02583 cinnamoyl-CoA reductase

Probab=95.06  E-value=0.53  Score=42.17  Aligned_cols=74  Identities=19%  Similarity=0.191  Sum_probs=49.0

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh--hHHHHHHHc---C--CcEE-ecCCCHHHHHHHcCCccEEE
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS--KKSEAIERL---G--ADSF-LVSRDQDEMQAAMGTMDGII  252 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~--~~~~~~~~~---g--a~~~-v~~~~~~~~~~~~~~~d~v~  252 (314)
                      .++.+|||.|+ |.+|...+..+...|.+|+++.++..  +.....+.+   +  ...+ .|-.+.+.+.....++|.|+
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~   83 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLF   83 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence            35678999998 99999999999999999999888532  222222333   1  1111 24445555666666788888


Q ss_pred             Ecc
Q 021300          253 DTV  255 (314)
Q Consensus       253 d~~  255 (314)
                      ...
T Consensus        84 ~~~   86 (297)
T PLN02583         84 CCF   86 (297)
T ss_pred             EeC
Confidence            654

>PTZ00146 fibrillarin; Provisional

Probab=95.04  E-value=0.39  Score=42.89  Aligned_cols=103  Identities=16%  Similarity=0.167  Sum_probs=63.9

Q ss_pred             hhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHH----cCCcEEecC-CCHHHHHHHc
Q 021300          173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIER----LGADSFLVS-RDQDEMQAAM  245 (314)
Q Consensus       173 ~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~~----~ga~~~v~~-~~~~~~~~~~  245 (314)
                      ..+.... +++|++||=+|+|+ |..+..++...+  .+|++++.+++..+++.+.    .+...++.. ..++......
T Consensus       123 ~g~~~l~-IkpG~~VLDLGaG~-G~~t~~lAdiVG~~G~VyAVD~s~r~~~dLl~~ak~r~NI~~I~~Da~~p~~y~~~~  200 (293)
T PTZ00146        123 GGVANIP-IKPGSKVLYLGAAS-GTTVSHVSDLVGPEGVVYAVEFSHRSGRDLTNMAKKRPNIVPIIEDARYPQKYRMLV  200 (293)
T ss_pred             CCcceec-cCCCCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCCEEEECCccChhhhhccc
Confidence            3455454 79999999899865 667778888775  3799988775433333322    233333322 1233233334


Q ss_pred             CCccEEEEccCCcc----cHHHHHHhhccCCEEEEE
Q 021300          246 GTMDGIIDTVSAVH----PLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       246 ~~~d~v~d~~g~~~----~~~~~~~~l~~~G~~v~~  277 (314)
                      +.+|+||-.+....    ....+..+|+++|++++.
T Consensus       201 ~~vDvV~~Dva~pdq~~il~~na~r~LKpGG~~vI~  236 (293)
T PTZ00146        201 PMVDVIFADVAQPDQARIVALNAQYFLKNGGHFIIS  236 (293)
T ss_pred             CCCCEEEEeCCCcchHHHHHHHHHHhccCCCEEEEE
Confidence            57999988765433    133567799999999884

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=95.04  E-value=0.21  Score=43.46  Aligned_cols=74  Identities=16%  Similarity=0.178  Sum_probs=49.8

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH----cCC-cE---EecCCCHHHHHH----H---cCC
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGA-DS---FLVSRDQDEMQA----A---MGT  247 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~----~ga-~~---~v~~~~~~~~~~----~---~~~  247 (314)
                      +.++||.|+ |.+|...++.+...|++++++.++..+.+++.++    .+. ..   ..|-.+.+.+..    +   .+.
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            467999987 9999999999988999999999887655444333    221 11   123344433222    1   247


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|+++.+.|.
T Consensus        82 id~vv~~ag~   91 (259)
T PRK12384         82 VDLLVYNAGI   91 (259)
T ss_pred             CCEEEECCCc
Confidence            8999999873

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.04  E-value=0.18  Score=42.07  Aligned_cols=113  Identities=16%  Similarity=0.190  Sum_probs=76.6

Q ss_pred             ccchhhhhhhhhhHhcCC---------CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE
Q 021300          163 PLLCAGITVYSPLRFYGL---------DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF  232 (314)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~---------~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~  232 (314)
                      .+||+..+....|+....         --.|.+++|+|. ..+|.=...++...|++|++...+.-..  . ...+  ..
T Consensus        32 ~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~--~-~~~~--~~  106 (197)
T cd01079          32 ILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV--F-TRGE--SI  106 (197)
T ss_pred             ccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc--c-cccc--cc
Confidence            467777777777765542         268999999996 8999999999999999998775433111  0 0000  00


Q ss_pred             ecCC----C-HHHHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          233 LVSR----D-QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       233 v~~~----~-~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      -.+.    + +..+.+....+|+|+-++|.+. +.---+.+++|-.++.+|...
T Consensus       107 ~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~-~~i~~d~ik~GavVIDVGi~~  159 (197)
T cd01079         107 RHEKHHVTDEEAMTLDCLSQSDVVITGVPSPN-YKVPTELLKDGAICINFASIK  159 (197)
T ss_pred             ccccccccchhhHHHHHhhhCCEEEEccCCCC-CccCHHHcCCCcEEEEcCCCc
Confidence            0011    1 1235567788999999999886 323367889999999999763

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.03  E-value=0.15  Score=44.73  Aligned_cols=75  Identities=16%  Similarity=0.278  Sum_probs=49.2

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCC---hhhHHHHHHHcCCcE--EecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTS---PSKKSEAIERLGADS--FLVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga---g~vG~~a~~~a~~~g~~vi~v~~~---~~~~~~~~~~~ga~~--~v~~~~~~~~~~~-------~~~  247 (314)
                      .+.++||.|+   +++|.+.++.+...|++|+++.+.   .++.+++.++++...  -.|-.+++.+.++       .+.
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG   84 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence            4688999983   689999998888899999887543   344445555555322  1344444333322       247


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|+++++.|.
T Consensus        85 iD~lvnnAG~   94 (260)
T PRK06997         85 LDGLVHSIGF   94 (260)
T ss_pred             CcEEEEcccc
Confidence            9999999874

>PRK03612 spermidine synthase; Provisional

Probab=95.03  E-value=0.23  Score=48.37  Aligned_cols=96  Identities=20%  Similarity=0.154  Sum_probs=60.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHH---cC--------Cc--EEecCCCHHHHHHHcCC
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIER---LG--------AD--SFLVSRDQDEMQAAMGT  247 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~---~g--------a~--~~v~~~~~~~~~~~~~~  247 (314)
                      +++++||++|+|. |..+..+++... .+++.++.+++-.+.+ ++   +.        ..  .++..+..+.+....+.
T Consensus       296 ~~~~rVL~IG~G~-G~~~~~ll~~~~v~~v~~VEid~~vi~~a-r~~~~l~~~~~~~~~dprv~vi~~Da~~~l~~~~~~  373 (521)
T PRK03612        296 ARPRRVLVLGGGD-GLALREVLKYPDVEQVTLVDLDPAMTELA-RTSPALRALNGGALDDPRVTVVNDDAFNWLRKLAEK  373 (521)
T ss_pred             CCCCeEEEEcCCc-cHHHHHHHhCCCcCeEEEEECCHHHHHHH-HhCCcchhhhccccCCCceEEEEChHHHHHHhCCCC
Confidence            4568899998753 556667777544 5888888887766444 44   11        01  12222223444444568


Q ss_pred             ccEEEEccCCcc-----------cHHHHHHhhccCCEEEEEcC
Q 021300          248 MDGIIDTVSAVH-----------PLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       248 ~d~v~d~~g~~~-----------~~~~~~~~l~~~G~~v~~G~  279 (314)
                      ||+|+-...+..           .++.+.+.|+++|.++.-..
T Consensus       374 fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~~~  416 (521)
T PRK03612        374 FDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQST  416 (521)
T ss_pred             CCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEecC
Confidence            999886544321           25678899999999887643

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=95.02  E-value=0.18  Score=42.06  Aligned_cols=72  Identities=17%  Similarity=0.298  Sum_probs=52.8

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--cEEe---cCCCHHH----HHHH---cCCccEE
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DSFL---VSRDQDE----MQAA---MGTMDGI  251 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~~~v---~~~~~~~----~~~~---~~~~d~v  251 (314)
                      ...+|.|+ +++|.+..|.+...|+++.+.+.+.+..++.++.+|.  ++.-   |-.+++.    +++.   .+..+++
T Consensus        15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvl   94 (256)
T KOG1200|consen   15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVL   94 (256)
T ss_pred             ceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcEE
Confidence            34566776 9999999999999999999999998888888888875  3322   2222222    2222   2469999


Q ss_pred             EEccC
Q 021300          252 IDTVS  256 (314)
Q Consensus       252 ~d~~g  256 (314)
                      ++|.|
T Consensus        95 VncAG   99 (256)
T KOG1200|consen   95 VNCAG   99 (256)
T ss_pred             EEcCc
Confidence            99998

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.02  E-value=0.24  Score=44.33  Aligned_cols=96  Identities=19%  Similarity=0.132  Sum_probs=69.6

Q ss_pred             ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (314)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~  241 (314)
                      ..||+..+....++....--.|.+++|+|. ..+|.=...++...|++|++.-......                     
T Consensus       137 ~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l---------------------  195 (297)
T PRK14186        137 LRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDL---------------------  195 (297)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCH---------------------
Confidence            356666666667776664468999999996 8999999999999999987764332222                     


Q ss_pred             HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      .+....+|+++-++|.+..  ---+.+++|-.++.+|...
T Consensus       196 ~~~~~~ADIvIsAvGkp~~--i~~~~ik~gavVIDvGin~  233 (297)
T PRK14186        196 ASITREADILVAAAGRPNL--IGAEMVKPGAVVVDVGIHR  233 (297)
T ss_pred             HHHHhhCCEEEEccCCcCc--cCHHHcCCCCEEEEecccc
Confidence            2334458889999987763  2356788898999998653

>PRK06953 short chain dehydrogenase; Provisional

Probab=94.99  E-value=0.17  Score=43.07  Aligned_cols=72  Identities=21%  Similarity=0.240  Sum_probs=50.3

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-EEecCCCHHHHHHH----c-CCccEEEEccCC
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAA----M-GTMDGIIDTVSA  257 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~-~~v~~~~~~~~~~~----~-~~~d~v~d~~g~  257 (314)
                      ++++|.|+ |.+|...++.+...|+++++++++++..+++. ..+.. ...|-.+.+.+.++    . +++|+++.+.|.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~   80 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ-ALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV   80 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH-hccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence            46888887 99999999988888999999999877665553 34443 22344444443332    2 258999998875

>PRK07578 short chain dehydrogenase; Provisional

Probab=94.98  E-value=0.42  Score=39.82  Aligned_cols=84  Identities=18%  Similarity=0.249  Sum_probs=53.6

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHH---cCCccEEEEccCCc---
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA---MGTMDGIIDTVSAV---  258 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~---~~~~d~v~d~~g~~---  258 (314)
                      ++||.|+ +++|...+..+... .+|+++.+++..           .-.|-.+++.++..   .+++|+++.+.|..   
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~-----------~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~~   69 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSGD-----------VQVDITDPASIRALFEKVGKVDAVVSAAGKVHFA   69 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCc-----------eEecCCChHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence            5888887 99999888877766 888888876431           11344444433332   24688888888732   


Q ss_pred             ----------------------ccHHHHHHhhccCCEEEEEcCCC
Q 021300          259 ----------------------HPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       259 ----------------------~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                                            ...+.+.+.++++|+++.+++..
T Consensus        70 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~  114 (199)
T PRK07578         70 PLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGIL  114 (199)
T ss_pred             chhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccc
Confidence                                  11233344556789999887643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	314
1yqd_A	366	Sinapyl Alcohol Dehydrogenase Complexed With Nadp+		1e-126
2cf5_A	357	Crystal Structures Of The Arabidopsis Cinnamyl Alco		3e-61
1uuf_A	369	Crystal Structure Of A Zinc-Type Alcohol Dehydrogen		5e-57
3two_A	348	The Crystal Structure Of Cad From Helicobacter Pylo		2e-51
1ps0_A	360	Crystal Structure Of The Nadp(H)-Dependent Cinnamyl		1e-41
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		6e-31
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		3e-29
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		3e-29
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		1e-28
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		3e-25
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		4e-24
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		8e-22
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		1e-21
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		5e-15
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		6e-15
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		8e-15
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		1e-14
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		1e-13
1h2b_A	359	Crystal Structure Of The Alcohol Dehydrogenase From		4e-13
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		9e-12
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		9e-12
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		4e-11
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		4e-11
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		9e-11
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		1e-09
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		2e-09
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		4e-09
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		6e-09
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		7e-09
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		8e-09
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		1e-08
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		1e-08
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		2e-08
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		3e-08
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		3e-08
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		5e-08
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		5e-08
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		6e-08
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		6e-08
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		9e-08
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		1e-07
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		2e-07
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		2e-07
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		2e-07
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		2e-07
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		2e-07
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		2e-07
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		2e-07
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		3e-07
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		3e-07
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		3e-07
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		4e-07
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		4e-07
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		4e-07
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		6e-07
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		6e-07
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		8e-07
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		1e-06
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		1e-06
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		1e-06
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		2e-06
4a2c_A	346	Crystal Structure Of Galactitol-1-Phosphate Dehydro		2e-06
1kol_A	398	Crystal Structure Of Formaldehyde Dehydrogenase Len		4e-06
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		4e-06
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		8e-06
3ip1_A	404	Structure Of Putative Alcohol Dehydrogenase (Tm_042		9e-06
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		1e-05
1jqb_A	351	Alcohol Dehydrogenase From Clostridium Beijerinckii		1e-05
1ped_A	351	Bacterial Secondary Alcohol Dehydrogenase (Apo-Form		1e-05
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		2e-05
2b83_A	351	A Single Amino Acid Substitution In The Clostridium		2e-05
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		3e-05
2dph_A	398	Crystal Structure Of Formaldehyde Dismutase Length		4e-05
3m6i_A	363	L-Arabinitol 4-Dehydrogenase Length = 363		9e-05
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		4e-04
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		8e-04

>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366

Iteration: 1
 Score =  449 bits (1155), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 210/296 (70%), Positives = 247/296 (83%)
Query: 1   MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
           M ++PE+EHP  AFGWAA+D SG LSPF+FSRRATGE+DV FKV +CG+CHSDLH IKN+
Sbjct: 5   MSKSPEEEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKND 64
Query: 61  WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
           WG ++YP+VPGHEIVG VTEVGSKV K  VGDKVGVGC+VG+C SC+SCA DLENYCPK+
Sbjct: 65  WGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKM 124
Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
           I+TYA+ YHDGTITYGGYS+ MVA+E +++R P+  PLD  APLLCAGITVYSPL+++GL
Sbjct: 125 ILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGL 184
Query: 181 DKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
           D+PG                KFAKA G KVTVISTSPSKK EA++  GADSFLVSRDQ++
Sbjct: 185 DEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQ 244
Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           MQAA GT+DGIIDTVSAVHPL+PL GLLKS GKL+LVGAPEKPLELPAFSL+ G +
Sbjct: 245 MQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRK 300

>pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol Dehydrogenases, Atcad5 Length = 357

Iteration: 1
 Score =  231 bits (590), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 139/289 (48%), Positives = 185/289 (64%)
Query: 8   EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP 67
           E  +   GWAA+D SG+LSP+ ++ R TG +DV  ++  CGICH+DLH  KN+ G + YP
Sbjct: 5   EAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYP 64
Query: 68  IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK 127
           +VPGHE+VG V EVGS VSKF VGD VGVGC+VG C  C  C  DLE YCPK I +Y + 
Sbjct: 65  MVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDV 124
Query: 128 YHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXX 187
           Y +G  T GG++   V  + FVV+IPEG  ++  APLLCAG+TVYSPL  +GL +PG+  
Sbjct: 125 YINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRG 184
Query: 188 XXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT 247
                        K AKAMG  VTVIS+S  K+ EA++ LGAD +++  DQ +M     +
Sbjct: 185 GILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADS 244
Query: 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
           +D +IDTV   H L P + LLK  GKL+L+G    PL+     L++G +
Sbjct: 245 LDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRK 293

>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369

Iteration: 1
 Score =  217 bits (553), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 123/272 (45%), Positives = 158/272 (58%), Gaps = 5/272 (1%)
Query: 25  LSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSK 84
           L P   +RR  G  DV  ++ +CG+CHSDLH +++EW  T+YP VPGHEIVG V  VG +
Sbjct: 35  LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQ 94
Query: 85  VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT-ITYGGYSDIMV 143
           V K+  GD VGVGC+V SC+ C+ C   LENYC  +  TY +   D    T GGYS  +V
Sbjct: 95  VEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIV 154
Query: 144 ADEHFVVRIPE-GTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKF 202
             E +V+RI      L A APLLCAGIT YSPLR +    PG                K 
Sbjct: 155 VHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAG-PGKKVGVVGIGGLGHMGIKL 213
Query: 203 AKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 262
           A AMG  V   +TS +K+ EA + LGAD  + SR+ DEM A + + D I++TV+A H L 
Sbjct: 214 AHAMGAHVVAFTTSEAKR-EAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLD 272
Query: 263 PLIGLLKSQGKLVLVGAPEKPLELP-AFSLLM 293
               LLK  G + LVGAP  P + P  F+L+M
Sbjct: 273 DFTTLLKRDGTMTLVGAPATPHKSPEVFNLIM 304

>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348

Iteration: 1
 Score =  199 bits (505), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 111/281 (39%), Positives = 155/281 (55%), Gaps = 12/281 (4%)
Query: 15  GWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEI 74
           G+A         P  FSR A G +DV   + + GICHSD+H   +EW   IYP++PGHEI
Sbjct: 7   GFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEI 66
Query: 75  VGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY--ANKYHDGT 132
            G++ EVG  V KFK+GD VGVGC V SC++C  C    E +C KV+ TY   + +HD  
Sbjct: 67  AGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNE 126
Query: 133 ITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXX 192
              GGYS+ +V DE++V+ + +  PL+  APLLCAGIT YSPL+F  + K G        
Sbjct: 127 PHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSKVTK-GTKVGVAGF 185
Query: 193 XXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII 252
                   K+A AMG +V+V + +  KK +A+  +G   F     Q + +     +D II
Sbjct: 186 GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-MGVKHFYTDPKQCKEE-----LDFII 239
Query: 253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLEL-PAFSLL 292
            T+   + L   + LL   G L LVG P  P+E+ P  S+ 
Sbjct: 240 STIPTHYDLKDYLKLLTYNGDLALVGLP--PVEVAPVLSVF 278

>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae Length = 360

Iteration: 1
 Score =  166 bits (421), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/268 (38%), Positives = 142/268 (52%), Gaps = 17/268 (6%)
Query: 37  EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKV-SKFKVGDKVG 95
           + D+  K+  CG+C SD+H     WGN   P+V GHEIVG V ++G K  S  KVG +VG
Sbjct: 33  DHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVG 92
Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
           VG  V SC  CD C  D E YC K + TY+  Y DG ++ GGY++ +   EHFVV IPE 
Sbjct: 93  VGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPEN 152
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVIST 215
            P    APLLC G+TVYSPL   G   PG                  +KAMG +  VIS 
Sbjct: 153 IPSHLAAPLLCGGLTVYSPLVRNGCG-PGKKVGIVGLGGIGSMGTLISKAMGAETYVISR 211
Query: 216 SPSKKSEAIERLGADSFLVSRDQ-DEMQAAMGTMDGIIDTVSAV----HPLMPLIGLLKS 270
           S  K+ +A+ ++GAD ++ + ++ D  +    T D I+   S++      +MP    +K 
Sbjct: 212 SSRKREDAM-KMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMP--KAMKV 268
Query: 271 QGKLVLVGAPE-------KPLELPAFSL 291
            G++V +  PE       KP  L A S+
Sbjct: 269 GGRIVSISIPEQHEMLSLKPYGLKAVSI 296

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score =  131 bits (329), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 128/262 (48%), Gaps = 13/262 (4%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           G   V  K+   G+CH+DLH    +W      P +PGHE VG V+ VGS VS+ K GD+V
Sbjct: 26  GPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRV 85
Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
           GV  +  +C  C+ C    E  C K       + + G    GGY + +VAD ++V  +P+
Sbjct: 86  GVPWLYSACGYCEHCLQGWETLCEK-------QQNTGYSVNGGYGEYVVADPNYVGLLPD 138
Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVIS 214
                  AP+LCAG+TVY  L+     +PG                ++A+AMG++V  + 
Sbjct: 139 KVGFVEIAPILCAGVTVYKGLKVTD-TRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVD 197
Query: 215 TSPSKKSEAIERLGADSFLVSRDQDE---MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQ 271
              +K + A  RLGA+  + +RD D    +Q  +G   G++ T  +       IG+++  
Sbjct: 198 IDDAKLNLA-RRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKAFSQAIGMVRRG 256
Query: 272 GKLVLVGAPEKPLELPAFSLLM 293
           G + L G P      P F +++
Sbjct: 257 GTIALNGLPPGDFGTPIFDVVL 278

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score =  125 bits (314), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 124/259 (47%), Gaps = 13/259 (5%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
           +V  ++  CG+CH+DLH    +W      P++PGHE VG+V EVG  V+  KVGD+VG+ 
Sbjct: 27  EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIP 86
Query: 98  CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTP 157
            +  +C  CD C    E  C        ++ + G    GGY++   A   +VV+IP+   
Sbjct: 87  WLYSACGHCDYCLSGQETLC-------EHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLS 139
Query: 158 LDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSP 217
            +  AP+ CAG+T Y  L+  G  KPG                ++AKAMG+ V  +    
Sbjct: 140 FEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIGGFGHVAVQYAKAMGLNVVAVDIG- 197
Query: 218 SKKSEAIERLGADSFLVSRDQDE---MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKL 274
            +K E  + LGAD  +    +D    M+  +G +   + T  +          ++  G  
Sbjct: 198 DEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGAC 257
Query: 275 VLVGAPEKPLELPAFSLLM 293
           VLVG P + + +P F  ++
Sbjct: 258 VLVGLPPEEMPIPIFDTVL 276

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score =  125 bits (314), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 124/259 (47%), Gaps = 13/259 (5%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
           +V  ++  CG+CH+DLH    +W      P++PGHE VG+V EVG  V+  KVGD+VG+ 
Sbjct: 27  EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIP 86
Query: 98  CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTP 157
            +  +C  CD C    E  C        ++ + G    GGY++   A   +VV+IP+   
Sbjct: 87  WLYSACGHCDYCLSGQETLC-------EHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLS 139
Query: 158 LDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSP 217
            +  AP+ CAG+T Y  L+  G  KPG                ++AKAMG+ V  +    
Sbjct: 140 FEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIG- 197
Query: 218 SKKSEAIERLGADSFLVSRDQDE---MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKL 274
            +K E  + LGAD  +    +D    M+  +G +   + T  +          ++  G  
Sbjct: 198 DEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGAC 257
Query: 275 VLVGAPEKPLELPAFSLLM 293
           VLVG P + + +P F  ++
Sbjct: 258 VLVGLPPEEMPIPIFDTVL 276

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score =  124 bits (310), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 126/262 (48%), Gaps = 13/262 (4%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           G   V  K+   G+CH+DLH  + +W      P +PGHE VG V  VGS V++ K GD+V
Sbjct: 30  GPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVKEGDRV 89
Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
           G+  +  +C  C+ C    E  C        ++ + G    GGY++ ++AD ++V  +P+
Sbjct: 90  GIPWLYTACGCCEHCLTGWETLC-------ESQQNTGYSVNGGYAEYVLADPNYVGILPK 142
Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVIS 214
                  AP+LCAG+TVY  L+     +PG                ++A+AMG+ V  I 
Sbjct: 143 NVEFAEIAPILCAGVTVYKGLKQTN-ARPGQWVAISGIGGLGHVAVQYARAMGLHVAAID 201
Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQAA---MGTMDGIIDTVSAVHPLMPLIGLLKSQ 271
                K E   +LGA   + +R +D ++A    +G   G++ T  +       IG+ +  
Sbjct: 202 ID-DAKLELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRG 260
Query: 272 GKLVLVGAPEKPLELPAFSLLM 293
           G + LVG P      P F +++
Sbjct: 261 GTIALVGLPPGDFPTPIFDVVL 282

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 118/249 (47%), Gaps = 14/249 (5%)
Query: 38  KDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96
            ++   V + G+CH+DLH    +W   +  P+V GHE  GVV  +G  V  +K+GD  G+
Sbjct: 31  NELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGI 90
Query: 97  GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGT 156
             + GSC +C+ C +  E+ CP   ++     HDG+     +     AD      IP+GT
Sbjct: 91  KWLNGSCMACEYCELGNESNCPHADLS--GYTHDGS-----FQQYATADAVQAAHIPQGT 143
Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTS 216
            L   AP+LCAGITVY  L+   L                    ++AKAMG +V  I   
Sbjct: 144 DLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGG 203
Query: 217 PSKKSEAIERLGADSFL-VSRDQDEMQAAMGTMD----GIIDTVSAVHPLMPLIGLLKSQ 271
             K+ E    +G + F+  ++++D + A +   D    G+I+   +   +      +++ 
Sbjct: 204 EGKE-ELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRAN 262
Query: 272 GKLVLVGAP 280
           G  VLVG P
Sbjct: 263 GTTVLVGMP 271

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 122/264 (46%), Gaps = 15/264 (5%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           G   +   +   G+CH+DLH  + +W      P +PGHE VG V+ VGS V   K GD+V
Sbjct: 49  GPGQIQVAIQASGVCHTDLHAAEGDWPVKPNPPFIPGHEGVGFVSAVGSGVKHVKEGDRV 108
Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
           G+  +  +C  C  C    E  C + + T       G    GG+++ +VAD +FV  +P+
Sbjct: 109 GIPWLYTACGHCRHCLGGWETLCEEQLNT-------GYSVNGGFAEYVVADPNFVGHLPK 161
Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVIS 214
               +  AP+LCAG+TVY  L+     KPG                ++A+AMG+ V  + 
Sbjct: 162 NIDFNEIAPVLCAGVTVYKGLKVTD-TKPGDWVVISGIGGLGHMAVQYARAMGLNVAAVD 220
Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLK 269
               +K +   RLGA   + ++   +  A +     G   G++ T  +       +G++ 
Sbjct: 221 ID-DRKLDLARRLGATVTVNAKTVADPAAYIRKETDGGAQGVLVTAVSPKAFEQALGMVA 279
Query: 270 SQGKLVLVGAPEKPLELPAFSLLM 293
             G + L G P     L  F++++
Sbjct: 280 RGGTVSLNGLPPGDFPLSIFNMVL 303

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score =  100 bits (250), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 141/300 (47%), Gaps = 34/300 (11%)
Query: 33  RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           RA    +    + +CG+CH+DLH+   ++GN    ++ GHE +G+V E+G+ VS  +VGD
Sbjct: 22  RAIKPNEALLDMEYCGVCHTDLHVAAGDYGNKAGTVL-GHEGIGIVKEIGADVSSLQVGD 80
Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSD--IMVADEHFVV 150
           +V V      C  C+ C    E +C +V        + G    GG ++  I+VAD  + V
Sbjct: 81  RVSVAWFFEGCGHCEYCVSGNETFCREV-------KNAGYSVDGGMAEEAIVVAD--YAV 131
Query: 151 RIPEGT-PLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK-AMGV 208
           ++P+G  P++A++ + CAG+T Y  ++  G+ KPG                ++AK   G 
Sbjct: 132 KVPDGLDPIEASS-ITCAGVTTYKAIKVSGV-KPGDWQVIFGAGGLGNLAIQYAKNVFGA 189
Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQD------EMQAAMGTMDGIIDTVSAVHPLM 262
           KV  +  +  K + A +++GAD  + S D +      ++   +G    I+  V+ +    
Sbjct: 190 KVIAVDINQDKLNLA-KKIGADVIINSGDVNPVDEIKKITGGLGVQSAIVCAVARI-AFE 247
Query: 263 PLIGLLKSQGKLVLVGAP--EKPLELPAFSL--------LMGEEEDSWWQHDWGDEGDSR 312
             +  LK  GK+V V  P  E  L +P            L+G   D      +G EG  +
Sbjct: 248 QAVASLKPMGKMVAVALPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKVK 307

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 141/300 (47%), Gaps = 34/300 (11%)
Query: 33  RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           RA    +    + +CG+CH+DLH+   ++GN    ++ GHE +G+V E+G+ VS  +VGD
Sbjct: 22  RAIKPNEALLDMEYCGVCHTDLHVAAGDFGNKAGTVL-GHEGIGIVKEIGADVSSLQVGD 80
Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSD--IMVADEHFVV 150
           +V V      C  C+ C    E +C +V        + G    GG ++  I+VAD  + V
Sbjct: 81  RVSVAWFFEGCGHCEYCVSGNETFCREV-------KNAGYSVDGGMAEEAIVVAD--YAV 131
Query: 151 RIPEGT-PLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK-AMGV 208
           ++P+G  P++A++ + CAG+T Y  ++  G+ KPG                ++AK   G 
Sbjct: 132 KVPDGLDPIEASS-ITCAGVTTYKAIKVSGV-KPGDWQVIFGAGGLGNLAIQYAKNVFGA 189
Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQD------EMQAAMGTMDGIIDTVSAVHPLM 262
           KV  +  +  K + A +++GAD  + S D +      ++   +G    I+  V+ +    
Sbjct: 190 KVIAVDINQDKLNLA-KKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCAVARI-AFE 247
Query: 263 PLIGLLKSQGKLVLVGAP--EKPLELPAFSL--------LMGEEEDSWWQHDWGDEGDSR 312
             +  LK  GK+V V  P  E  L +P            L+G   D      +G EG  +
Sbjct: 248 QAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKVK 307

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 78.6 bits (192), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 112/257 (43%), Gaps = 29/257 (11%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGN--------TIYPIVPGHEIVGVVTEVGSKVSKFKV 90
            V  KV   G+CHSD+HM +  +GN           P+  GHEI G + EVG +V  +  
Sbjct: 27  QVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 91  GDKVGVGCMVGSCRSCDSCAIDLENYC--PKVIMTYANKYHDGTITYGGYSD-IMVADEH 147
           GD V V  + G   +C  C I  E+ C  P+ +         G    G Y++ ++V    
Sbjct: 87  GDLVAVNPLQGEG-NCYYCRIGEEHLCDSPRWL---------GINFDGAYAEYVIVPHYK 136
Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 207
           ++ ++     ++A APL C+GIT Y  +R   LD                   + AKA+ 
Sbjct: 137 YMYKLRRLNAVEA-APLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVS 195
Query: 208 VKVTVISTSPSKKS-EAIERLGADSFLVSRDQDEMQAAMGT-----MDGIIDTVSAVHPL 261
              T+I     +++ EA +R GAD  + +  QD +           +D +ID   +   L
Sbjct: 196 -GATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYSEKTL 254
Query: 262 MPLIGLLKSQGKLVLVG 278
                 L  QGK V+VG
Sbjct: 255 SVYPKALAKQGKYVMVG 271

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 78.2 bits (191), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 112/257 (43%), Gaps = 29/257 (11%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGN--------TIYPIVPGHEIVGVVTEVGSKVSKFKV 90
            V  KV   G+CHSD+HM +  +GN           P+  GHEI G + EVG +V  +  
Sbjct: 27  QVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 91  GDKVGVGCMVGSCRSCDSCAIDLENYC--PKVIMTYANKYHDGTITYGGYSD-IMVADEH 147
           GD V V    G   +C  C I  E+ C  P+ +         G    G Y++ ++V    
Sbjct: 87  GDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL---------GINFDGAYAEYVIVPHYK 136
Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 207
           ++ ++     ++A APL C+GIT Y  +R   LD                   + AKA+ 
Sbjct: 137 YMYKLRRLNAVEA-APLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVS 195
Query: 208 VKVTVISTSPSKKS-EAIERLGADSFLVSRDQDEMQAAMGT-----MDGIIDTVSAVHPL 261
              T+I     +++ EA +R GAD  + +  QD +           +D +ID  ++   L
Sbjct: 196 -GATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTL 254
Query: 262 MPLIGLLKSQGKLVLVG 278
                 L  QGK V+VG
Sbjct: 255 SVYPKALAKQGKYVMVG 271

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 77.8 bits (190), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 113/256 (44%), Gaps = 27/256 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGN--------TIYPIVPGHEIVGVVTEVGSKVSKFKV 90
            V  K+   G+CHSD+HM +  +GN           P+  GHEI G + EVG +V  +  
Sbjct: 27  QVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGRIEEVGDEVVGYSK 86
Query: 91  GDKVGVGCMVGSCRSCDSCAIDLENYC--PKVIMTYANKYHDGTITYGGYSDIMVADEHF 148
           GD V V    G   +C  C I  E+ C  P+    +    +DG   Y  Y  ++V    +
Sbjct: 87  GDLVAVNPWEGEG-NCYYCRIGEEHLCDSPR----WLGINYDG--AYAEY--VLVPHYKY 137
Query: 149 VVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGV 208
           + ++   + ++A APL C+G+T Y  +R   LD                   + AKA+  
Sbjct: 138 LYKLRRLSAVEA-APLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQIAKAVS- 195
Query: 209 KVTVISTSPSKKS-EAIERLGADSFLVSRDQDEMQAAMGTM-----DGIIDTVSAVHPLM 262
             T+I     +++ EA +R GAD  + +  QD +            D +ID  ++   L 
Sbjct: 196 GATIIGVDVREEALEAAKRAGADYVINASSQDPVSEIRRITQGKGADAVIDLNNSEKTLS 255
Query: 263 PLIGLLKSQGKLVLVG 278
               +L  QGK V+VG
Sbjct: 256 IYPYVLAKQGKYVMVG 271

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 111/257 (43%), Gaps = 29/257 (11%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGN--------TIYPIVPGHEIVGVVTEVGSKVSKFKV 90
            V  KV   G+CHSD+HM +  +GN           P+  GHEI G + EVG +V  +  
Sbjct: 27  QVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 91  GDKVGVGCMVGSCRSCDSCAIDLENYC--PKVIMTYANKYHDGTITYGGYSD-IMVADEH 147
           GD V V    G   +C  C I  E+ C  P+ +         G    G Y++ ++V    
Sbjct: 87  GDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL---------GINFDGAYAEYVIVPHYK 136
Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 207
           ++ ++     ++A APL C+GIT Y  +R   LD                   + AKA+ 
Sbjct: 137 YMYKLRRLNAVEA-APLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVS 195
Query: 208 VKVTVISTSPSKKS-EAIERLGADSFLVSRDQDEMQAAMGT-----MDGIIDTVSAVHPL 261
              T+I     +++ EA +R GAD  + +  QD +           +D +ID   +   L
Sbjct: 196 -GATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYSEKTL 254
Query: 262 MPLIGLLKSQGKLVLVG 278
                 L  QGK V+VG
Sbjct: 255 SVYPKALAKQGKYVMVG 271

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 106/256 (41%), Gaps = 27/256 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGN--------TIYPIVPGHEIVGVVTEVGSKVSKFKV 90
            V  KV   G+CHSD+H  +  +GN           P+  GHEI G + EVG +V  +  
Sbjct: 27  QVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 91  GDKVGVGCMVGSCRSCDSCAIDLENYC--PKVIMTYANKYHDGTITYGGYSD-IMVADEH 147
           GD V V    G   +C  C I  E+ C  P+ +         G    G Y++ ++V    
Sbjct: 87  GDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL---------GINFDGAYAEYVIVPHYK 136
Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 207
           +  ++     ++A APL C+GIT Y  +R   LD                   + AKA+ 
Sbjct: 137 YXYKLRRLNAVEA-APLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAVQIAKAVS 195
Query: 208 VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT-----MDGIIDTVSAVHPLM 262
               +      +  EA +R GAD  + +  QD +           +D +ID  ++   L 
Sbjct: 196 GATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLS 255
Query: 263 PLIGLLKSQGKLVLVG 278
                L  QGK V VG
Sbjct: 256 VYPKALAKQGKYVXVG 271

>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 109/265 (41%), Gaps = 35/265 (13%)
Query: 33  RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVP---GHEIVGVVTEVGSKVSKFK 89
           R  G  DV  ++   G+CH+DLH+++  W   + P +P   GHE VG + EV   V   +
Sbjct: 37  RLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE 96
Query: 90  VGDKVGVGCMV--GSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH 147
            GD V +   V  G+C +C +     + +C        N    G    GG+++ M     
Sbjct: 97  KGDPVILHPAVTDGTCLACRAGE---DMHC-------ENLEFPGLNIDGGFAEFMRTSHR 146
Query: 148 FVVRIPEGT---PLDATAPLLCAGITVYSPLRFYGLD-KPGMXXXXXXXXXXXXXXXKFA 203
            V+++P+      L   APL  AGIT Y  ++       PG                +  
Sbjct: 147 SVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLL 206
Query: 204 KAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 263
           K M     +      +K +  ERLGAD  + +R +D ++  M    G       V+  M 
Sbjct: 207 KVMTPATVIALDVKEEKLKLAERLGADHVVDAR-RDPVKQVMELTRG-----RGVNVAMD 260
Query: 264 LIG----------LLKSQGKLVLVG 278
            +G          LL   G+L++VG
Sbjct: 261 FVGSQATVDYTPYLLGRMGRLIIVG 285

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score = 67.4 bits (163), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGDK 93
           G  ++  KVT  G+CHSD+ ++        Y  P+  GHE VG V E+G  V+ F VGD 
Sbjct: 24  GPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDA 83
Query: 94  VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADE-HFVVRI 152
           V V    G C +C +CA   ENYC +           G  + G  ++ M+ D    +V I
Sbjct: 84  VAVYGPWG-CGACHACARGRENYCTRA--ADLGITPPGLGSPGSMAEYMIVDSARHLVPI 140
Query: 153 PEGTPLDATAPLLCAGITVYSPL-RFYGLDKPG 184
            +  P+ A APL  AG+T Y  + R   L  PG
Sbjct: 141 GDLDPV-AAAPLTDAGLTPYHAISRVLPLLGPG 172

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 67.4 bits (163), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 116/269 (43%), Gaps = 34/269 (12%)
Query: 38  KDVTFKVTHCGICHSDLHMIKNEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           ++V  ++   G+C +DL + K       +  PI+ GHE  G + EVG +++K K GD V 
Sbjct: 29  EEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVG-ELAKVKKGDNVV 87
Query: 96  VGCMVG--SCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIM-VADEHFVVRI 152
           V    G  +CR C        N C        N+   G  T GG+S+ M V    ++V++
Sbjct: 88  VYATWGDLTCRYCREGKF---NICK-------NQIIPGQTTNGGFSEYMLVKSSRWLVKL 137
Query: 153 PEGTPLDATAPLLCAGITVYSPLR-----FYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 207
              +P++A APL  AG T    +R          +P                 +  KA+ 
Sbjct: 138 NSLSPVEA-APLADAGTTSMGAIRQALPFISKFAEP--VVIVNGIGGLAVYTIQILKALM 194
Query: 208 VKVTVISTSPSKKSE--AIERLGADSFLVSRDQDEMQAAMGTMDGI-----IDTVSAVHP 260
             +T++  S SKK    A+E LGAD   VS  +D         DG+     ID V     
Sbjct: 195 KNITIVGISRSKKHRDFALE-LGAD--YVSEMKDAESLINKLTDGLGASIAIDLVGTEET 251
Query: 261 LMPLIGLLKSQGKLVLVGAPEKPLELPAF 289
              L  LL  +G ++LVG   K + L AF
Sbjct: 252 TYNLGKLLAQEGAIILVGMEGKRVSLEAF 280

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 38  KDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
           K+V  K+   GIC +D H+IK    +  +P++ GHE  G+V  +G  V+  K GDKV + 
Sbjct: 34  KEVRIKILATGICRTDDHVIKGTMVSK-FPVIVGHEATGIVESIGEGVTTVKPGDKV-IP 91
Query: 98  CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY-------------GGYSDIMVA 144
             +  CR C++C     N C +  +T      DGT  +               +++  V 
Sbjct: 92  LFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVV 151
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG 184
           DE  V +I +  P +    + C   T Y      G  KPG
Sbjct: 152 DESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPG 191

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 38  KDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
           K+V  K+   GIC +D H+IK    +  +P++ GHE  G+V  +G  V+  K GDKV + 
Sbjct: 34  KEVRIKILATGICRTDDHVIKGTMVSK-FPVIVGHEATGIVESIGEGVTTVKPGDKV-IP 91
Query: 98  CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY-------------GGYSDIMVA 144
             +  CR C++C     N C +  +T      DGT  +               +++  V 
Sbjct: 92  LFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFLNTSTFTEYTVV 151
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG 184
           DE  V +I +  P +    + C   T Y      G  KPG
Sbjct: 152 DESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPG 191

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 92/235 (39%), Gaps = 24/235 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+ +  +CH+D +    +    ++P + GHE  G+V  VG  V++ + GD V + C
Sbjct: 35  EVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHV-IPC 93
Query: 99  MVGSCRSCDSCAIDLENYCPKV-------IMTYANK----------YH-DGTITYGGYSD 140
               CR C  C     N C KV       IM    K          YH  GT T+  Y+ 
Sbjct: 94  YQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYT- 152
Query: 141 IMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXX 200
             V  +  V +I    PLD    L C   T    +      +PG                
Sbjct: 153 --VVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVA 210
Query: 201 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE--MQAAMGTMDGIID 253
           + AK  G    +     SKK E  ++ G + F+  +D D+   +  +   DG +D
Sbjct: 211 EGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVD 265

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 107/273 (39%), Gaps = 28/273 (10%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  D+  KV  CGIC +D H++  E+ +T  P+  GHE  G+V E GS V     G ++ 
Sbjct: 46  GPDDLLVKVEACGICGTDRHLLHGEFPST-PPVTLGHEFCGIVVEAGSAVRDIAPGARI- 103
Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
            G    SC  C  C     N C        N    G    GG+++ ++        IP  
Sbjct: 104 TGDPNISCGRCPQCQAGRVNLC-------RNLRAIGIHRDGGFAEYVLVPRKQAFEIP-- 154
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLD----KPGMXXXXXXXXXXXXXXXKFAKAMGVKVT 211
             LD      C  +        +G+D    K G                + A+  G    
Sbjct: 155 LTLDPVHGAFCEPLACC----LHGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTV 210
Query: 212 VISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT-------MDGIIDTVSAVHPLMPL 264
           ++ST  + K    E +GA + +     D ++A  G        +D +I+       +   
Sbjct: 211 ILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQS 270
Query: 265 IGLLKSQGKLVLVGA-PE-KPLELPAFSLLMGE 295
             L K+ G +V++G  P+ + +E+  F +L  E
Sbjct: 271 TRLAKAGGTVVILGVLPQGEKVEIEPFDILFRE 303

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 114/276 (41%), Gaps = 27/276 (9%)
Query: 40  VTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99
           +  ++   G+C SD+HM + E      PI+ GHE  G V EV  +      G+ +  G +
Sbjct: 45  ILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLN-GELLKPGDL 103
Query: 100 VG-----SCRSCDSCAIDLENY-CPKVIMTYANKYHDGTITY----GGYSDIMVAD-EHF 148
           +      +C  C  C +  E Y CP   +   N+   G   Y    G YS  +V D E  
Sbjct: 104 IVWNRGITCGECYWCKVSKEPYLCPNRKVYGINR---GCSEYPHLRGCYSSHIVLDPETD 160
Query: 149 VVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGV 208
           V+++ E   LD  A  +C+G T Y     Y     G                  A+++G 
Sbjct: 161 VLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGA 220
Query: 209 K-VTVISTSPSKKSEAIERLGADSFLVSRD---QDEMQAAMGTMDG-----IIDTVSAVH 259
           + V VI+ SP++   A E +GAD  L  R+   ++  +A M    G     I++      
Sbjct: 221 ENVIVIAGSPNRLKLA-EEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSR 279
Query: 260 PLMPLIGLLKSQGKLVLVG--APEKPLELPAFSLLM 293
            L+    LL+  G   + G   P+ P+    +  L+
Sbjct: 280 ALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLV 315

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 109/277 (39%), Gaps = 25/277 (9%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GICH+D H++      T  P++ GHE  G+V  VG  V+  K GDKV +  
Sbjct: 35  EVRIKMVAVGICHTDDHVVSGNL-VTPLPVILGHEAAGIVESVGEGVTTVKPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGTITY-------------GGYSDIMVA 144
               C  C  C     NYC K  +        DGT  +               +S   V 
Sbjct: 93  FTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK 204
           DE+ V +I   +PL+    + C   T Y          PG                   K
Sbjct: 153 DENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCK 212
Query: 205 AMG-VKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGTM-DGIID----TVSA 257
           A G  ++  +  +  K ++A E LGA   +  +D +  +Q  +  M DG +D     +  
Sbjct: 213 AAGAARIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGR 271
Query: 258 VHPLMP-LIGLLKSQGKLVLVGAPEKPLELPAFSLLM 293
           +  +M  L+   ++ G  V+VG P     L    +L+
Sbjct: 272 LDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLL 308

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 91/235 (38%), Gaps = 24/235 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  KV +  +CH+D +    +    ++P V GHE  G+V  VG  V++ + GD V + C
Sbjct: 53  EVRVKVLYTALCHTDAYTWSGKDPEGLFPCVLGHEAAGIVESVGEGVTEVQPGDHV-IPC 111
Query: 99  MVGSCRSCDSCAIDLENYCPKV-------IMTYANK----------YH-DGTITYGGYSD 140
               CR C  C     N C KV       +M    K          YH  GT T+  Y+ 
Sbjct: 112 YQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYT- 170
Query: 141 IMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXX 200
             V  +  V +I    PL+    L C   T    +      +PG                
Sbjct: 171 --VVHDVSVAKIDPVAPLEKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVA 228
Query: 201 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE--MQAAMGTMDGIID 253
           + AKA G    +     SKK +  +  G   F+  ++ ++   Q  +   DG +D
Sbjct: 229 EGAKAAGASRIIGIDIDSKKFDRAKNFGVTEFINPKEHEQPIQQVIVDLTDGGVD 283

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 111/275 (40%), Gaps = 34/275 (12%)
Query: 32  RRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVG 91
           R+  G+ +V  KV   G+CH+DL +++++      P V GHE  G++  +G  V++ +VG
Sbjct: 27  RQPQGD-EVLVKVVATGMCHTDL-IVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVG 84
Query: 92  DKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYS----DIMVADEH 147
           D V +    G C  C  C      YC +    +  +   G  + G ++    D  V ++H
Sbjct: 85  DHVVLS--YGYCGKCTQCNTGNPAYCSE----FFGRNFSGADSEGNHALCTHDQGVVNDH 138
Query: 148 F----------------VVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD-KPGMXXXXX 190
           F                 V++ +  P++   PL C GI   +      L   P       
Sbjct: 139 FFAQSSFATYALSRENNTVKVTKDVPIELLGPLGC-GIQTGAGACINALKVTPASSFVTW 197
Query: 191 XXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
                       AK  G  + +       + E  ++LGA   + S+ QD + A     DG
Sbjct: 198 GAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDG 257
Query: 251 ----IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281
                +++  +   L   +  L   GK+ +VGAP+
Sbjct: 258 GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQ 292

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  KV   GIC SD H+ +       YP V GHE  GV+  VG  V   +VG++V V  
Sbjct: 46  EVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVESARVGERVAVDP 105
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGT 156
           +V SC  C  C+I   N C  + +        G    GG+S+  V       +IPE  
Sbjct: 106 VV-SCGHCYPCSIGKPNVCTTLAVL-------GVHADGGFSEYAVVPAKNAWKIPEAV 155

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 112/263 (42%), Gaps = 22/263 (8%)
Query: 37  EKDVTFKVTHCGICHSDLHMIKN-EWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGDK 93
           E +V  ++ + GIC SD+H  ++    + I   P+V GHE  G V +VG  V   K GD+
Sbjct: 28  EDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDR 87
Query: 94  VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP 153
           V V   V  CR C  C     N CP   +T+     D     G  +   V    F  ++P
Sbjct: 88  VAVEPGV-PCRRCQFCKEGKYNLCPD--LTFCATPPDD----GNLARYYVHAADFCHKLP 140
Query: 154 EGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVI 213
           +   L+  A L    + V++  R  G+ + G                  AKA G  V   
Sbjct: 141 DNVSLEEGALLEPLSVGVHA-CRRAGV-QLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCT 198
Query: 214 STSPSKKSEAIERLGADSFLV--------SRDQDEMQAAMGTMDGIIDTVSAVHPLMPL- 264
           + SP ++ E  +  GAD  LV        S   + +++A+G +  +    S     + + 
Sbjct: 199 ARSP-RRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIG 257
Query: 265 IGLLKSQGKLVLVGAPEKPLELP 287
           I + ++ G L+LVG   + + +P
Sbjct: 258 INITRTGGTLMLVGMGSQMVTVP 280

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 63/150 (42%), Gaps = 20/150 (13%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTI--YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96
           +V  K+   GIC SD H++    GN +   P++ GHE  G+V  VG  V+  K GDKV +
Sbjct: 35  EVRIKMVAAGICRSDEHVVS---GNLVTPLPVILGHEAAGIVESVGEGVTTVKPGDKV-I 90
Query: 97  GCMVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGTITY-------------GGYSDIM 142
                 C  C  C     NYC K  +        DGT  +               +S   
Sbjct: 91  PLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQDGTRRFTCSGKPIHHFVGVSTFSQYT 150
Query: 143 VADEHFVVRIPEGTPLDATAPLLCAGITVY 172
           V DE+ V +I   +PL+    + C   T Y
Sbjct: 151 VVDENAVAKIDAASPLEKVCLIGCGFSTGY 180

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 105/284 (36%), Gaps = 40/284 (14%)
Query: 38  KDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
            ++  K+   G+CH+DL+ +        +P+V GHE  G+V  VG  V++F+ G+KV + 
Sbjct: 34  NEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKV-IP 92
Query: 98  CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD--------------------GTITYGG 137
             +  C  C  C     N C K    +AN+  D                    GT T+  
Sbjct: 93  LFISQCGECRFCQSPKTNQCVK---GWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQ 149
Query: 138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXX 197
           Y+   V ++  V +I    PLD    L C   T +         +PG             
Sbjct: 150 YT---VVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGL 206
Query: 198 XXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE------MQAAMGTMDGI 251
                  + G K  +       K E  +  GA  F+   D  E       +   G +D  
Sbjct: 207 AAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFS 266
Query: 252 IDTVSAVHPLM-PLIGLLKSQGKLVLVG------APEKPLELPA 288
           ++ V  V  +   L   LK  G  VLVG         +P++L A
Sbjct: 267 LECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIA 310

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 114/292 (39%), Gaps = 30/292 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC +D H++      T  P++ GHE  G+V  VG  V+  K GDKV +  
Sbjct: 35  EVRIKMVAVGICRTDDHVVSGNL-VTPLPVILGHEAAGIVESVGEGVTTVKPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGTITY-------------GGYSDIMVA 144
               C  C  C     NYC K  +        DGT  +               +S   V 
Sbjct: 93  FTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK 204
           DE+ V +I   +PL+    + C   T Y          PG                   K
Sbjct: 153 DENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCK 212
Query: 205 AMG-VKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGTM-DGIID----TVSA 257
           A G  ++  +  +  K ++A E LGA   +  +D +  +Q  +  M DG +D     +  
Sbjct: 213 AAGAARIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGR 271
Query: 258 VHPLMP-LIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGEEEDSWWQHDWG 306
           +  +M  L+   ++ G  V+VG P   + L +    LL G    +W    +G
Sbjct: 272 LDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGR---TWKGAVYG 320

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 108/277 (38%), Gaps = 25/277 (9%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC +D H++      T  P++ GHE  G+V  VG  V+  K GDKV +  
Sbjct: 35  EVRIKMVAVGICRTDDHVVSGNL-VTPLPVILGHEAAGIVESVGEGVTTVKPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGTITY-------------GGYSDIMVA 144
               C  C  C     NYC K  +        DGT  +               +S   V 
Sbjct: 93  FTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK 204
           DE+ V +I   +PL+    + C   T Y          PG                   K
Sbjct: 153 DENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCK 212
Query: 205 AMG-VKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGTM-DGIID----TVSA 257
           A G  ++  +  +  K ++A E LGA   +  +D +  +Q  +  M DG +D     +  
Sbjct: 213 AAGAARIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGR 271
Query: 258 VHPLMP-LIGLLKSQGKLVLVGAPEKPLELPAFSLLM 293
           +  +M  L+   ++ G  V+VG P     L    +L+
Sbjct: 272 LDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLL 308

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 109/277 (39%), Gaps = 25/277 (9%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC +D H++      T  P++ GHE  G+V  VG  V+  K GDKV +  
Sbjct: 35  EVRIKMVAVGICGTDDHVVSGTM-VTPLPVILGHEAAGIVESVGEGVTTVKPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGTITY-------------GGYSDIMVA 144
            +  C  C  C     NYC K  +        DGT  +               +S   V 
Sbjct: 93  AIPQCGKCRICKNPESNYCLKNDVSNPQGTLQDGTSRFTCRRKPIHHFLGISTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK 204
           DE+ V +I   +PL+    + C   T Y          PG                   K
Sbjct: 153 DENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCK 212
Query: 205 AMG-VKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGTM-DGIID----TVSA 257
           A G  ++  +  +  K ++A E LGA   +  +D +  +Q  +  M DG +D     +  
Sbjct: 213 AAGAARIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGR 271
Query: 258 VHPLMP-LIGLLKSQGKLVLVGAPEKPLELPAFSLLM 293
           +  +M  L+   ++ G  V+VG P     L    +L+
Sbjct: 272 LDTMMASLLCCHEACGTSVIVGVPPDSQNLSMNPMLL 308

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 114/292 (39%), Gaps = 30/292 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC +D H++      T  P++ GHE  G+V  VG  V+  K GDKV +  
Sbjct: 35  EVRIKMVAVGICGTDDHVVSGNL-VTPLPVILGHEAAGIVESVGEGVTTVKPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGTITY-------------GGYSDIMVA 144
               C  C  C     NYC K  +        DGT  +               +S   V 
Sbjct: 93  FTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK 204
           DE+ V +I   +PL+    + C   T Y          PG                   K
Sbjct: 153 DENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCK 212
Query: 205 AMG-VKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGTM-DGIID----TVSA 257
           A G  ++  +  +  K ++A E LGA   +  +D +  +Q  +  M DG +D     +  
Sbjct: 213 AAGAARIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGR 271
Query: 258 VHPLMP-LIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGEEEDSWWQHDWG 306
           +  +M  L+   ++ G  V+VG P   + L +    LL G    +W    +G
Sbjct: 272 LDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGR---TWKGAVYG 320

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 15/147 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD H++       + P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVAAGICRSDDHVVSGTLVAPL-PVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY-------------GGYSDIMVAD 145
            +  C  C  C     N C K +        DGT  +               +S   V D
Sbjct: 93  FIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVD 152
Query: 146 EHFVVRIPEGTPLDATAPLLCAGITVY 172
           E  V +I   +PL+    + C   T Y
Sbjct: 153 EISVAKIDAASPLEKVCLVGCGFSTGY 179

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 15/147 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD H++       + P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVAAGICRSDDHVVSGTLVAPL-PVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY-------------GGYSDIMVAD 145
            +  C  C  C     N C K +        DGT  +               +S   V D
Sbjct: 93  FIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVD 152
Query: 146 EHFVVRIPEGTPLDATAPLLCAGITVY 172
           E  V +I   +PL+    + C   T Y
Sbjct: 153 EISVAKIDAASPLEKVCLVGCGFSTGY 179

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  ++    +CH+D  +I +++    +P++ GHE  G+V  +G  V+  K GDKV +  
Sbjct: 37  EVRIQIIATSLCHTDATVIDSKFEGLAFPVIVGHEAAGIVESIGPGVTNVKPGDKV-IPL 95
Query: 99  MVGSCRSCDSCAIDLENYCPKV 120
               CR C  C   L N C K+
Sbjct: 96  YAPLCRKCKFCLSPLTNLCGKI 117

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD  ++K E   + +P++ GHE VGVV  +G+ V+  K GDKV +  
Sbjct: 36  EVRIKILASGICGSDSSVLK-EIIPSKFPVILGHEAVGVVESIGAGVTCVKPGDKV-IPL 93
Query: 99  MVGSCRSCDSCAIDLENYCPK 119
            V  C SC +C     N+C K
Sbjct: 94  FVPQCGSCRACKSSNSNFCEK 114

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 62/148 (41%), Gaps = 15/148 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+    +CH+D + +        +P++ GHE  G+V  VG  V+K K GD V +  
Sbjct: 34  EVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGT----------ITYGG---YSDIMVA 144
            +  C  C  C     N C K+ +T       DGT          + Y G   +S+  V 
Sbjct: 93  YIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
            +  V +I    PLD    L C   T Y
Sbjct: 153 ADISVAKIDPLAPLDKVCLLGCGISTGY 180

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 62/148 (41%), Gaps = 15/148 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+    +CH+D + +        +P++ GHE  G+V  VG  V+K K GD V +  
Sbjct: 33  EVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTV-IPL 91
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGT----------ITYGG---YSDIMVA 144
            +  C  C  C     N C K+ +T       DGT          + Y G   +S+  V 
Sbjct: 92  YIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVV 151
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
            +  V +I    PLD    L C   T Y
Sbjct: 152 ADISVAKIDPLAPLDKVCLLGCGISTGY 179

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 62/148 (41%), Gaps = 15/148 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+    +CH+D + +        +P++ GHE  G+V  VG  V+K K GD V +  
Sbjct: 34  EVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGT----------ITYGG---YSDIMVA 144
            +  C  C  C     N C K+ +T       DGT          + Y G   +S+  V 
Sbjct: 93  YIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
            +  V +I    PLD    L C   T Y
Sbjct: 153 ADISVAKIDPLAPLDKVCLLGCGISTGY 180

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD H++      T  P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
               C  C  C     N+C K  ++       DGT  +               +S   V 
Sbjct: 93  FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
           DE  V +I   +PL+    + C   T Y
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGY 180

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD H++      T  P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
               C  C  C     N+C K  ++       DGT  +               +S   V 
Sbjct: 93  FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
           DE  V +I   +PL+    + C   T Y
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGY 180

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD H++      T  P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
               C  C  C     N+C K  ++       DGT  +               +S   V 
Sbjct: 93  FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
           DE  V +I   +PL+    + C   T Y
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGY 180

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD H++      T  P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
               C  C  C     N+C K  ++       DGT  +               +S   V 
Sbjct: 93  FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
           DE  V +I   +PL+    + C   T Y
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGY 180

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD H++      T  P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
               C  C  C     N+C K  ++       DGT  +               +S   V 
Sbjct: 93  FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
           DE  V +I   +PL+    + C   T Y
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGY 180

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD H++      T  P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
               C  C  C     N+C K  ++       DGT  +               +S   V 
Sbjct: 93  FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
           DE  V +I   +PL+    + C   T Y
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGY 180

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD H++      T  P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
               C  C  C     N+C K  ++       DGT  +               +S   V 
Sbjct: 93  ATPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
           DE  V +I   +PL+    + C   T Y
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGY 180

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 42/232 (18%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  KV    IC +DLH+ + NEW  +    P + GHE+ G V EVG  V   +VGD
Sbjct: 28  GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVEDLQVGD 87
Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVAD------- 145
            + V   +  C  C +C  +  + C    +   +   DG   +  Y+ +   +       
Sbjct: 88  YISVETHI-VCGKCYACKHNRYHVCQNTKIFGVDM--DGVFAH--YAIVPAKNAWKNPKD 142
Query: 146 ---EHFVVRIPEGTPLDATAPLLCAG----ITVYSPLRFYGLDKPGMXXXXXXXXXXXXX 198
              E+  ++ P G  +D       AG    IT   PL   G+                  
Sbjct: 143 MPPEYAALQEPLGNAVDTVLAGPIAGRSTLITGAGPLGLLGI------------------ 184
Query: 199 XXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
               AKA G    ++S     + +  +++GAD  +   ++D ++  M   DG
Sbjct: 185 --AVAKASGAYPVIVSEPSEFRRKLAKKVGADYVVNPFEEDPVKFVMDITDG 234

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD H++      T  P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
               C  C  C     N+C K  ++       DGT  +               +S   V 
Sbjct: 93  WTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
           DE  V +I   +PL+    + C   T Y
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGY 180

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD H++      T  P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
               C  C  C     N+C K  ++       DGT  +               +S   V 
Sbjct: 93  WTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
           DE  V +I   +PL+    + C   T Y
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGY 180

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 88/222 (39%), Gaps = 22/222 (9%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  KV    IC +DLH+ + NEW  +    P + GHE+ G V E+G  V   +VGD
Sbjct: 27  GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGD 86
Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
            V V   +  C  C +C     + C        N    G  T G +++  V     + + 
Sbjct: 87  YVSVETHI-VCGKCYACRRGQYHVC-------QNTKIFGVDTDGVFAEYAVVPAQNIWKN 138
Query: 153 PEGTPLDATA---PLLCAGITVYS-PLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGV 208
           P+  P +      PL  A  TV + P+        G                  AKA G 
Sbjct: 139 PKSIPPEYATLQEPLGNAVDTVLAGPIS-------GKSVLITGAGPLGLLGIAVAKASGA 191
Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
              ++S     + E  +++GAD  +   ++D ++      DG
Sbjct: 192 YPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVXDITDG 233

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 88/222 (39%), Gaps = 22/222 (9%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  KV    IC +DLH+ + NEW  +    P + GHE+ G V E+G  V   +VGD
Sbjct: 28  GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGD 87
Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
            V V   +  C  C +C     + C        N    G  T G +++  V     + + 
Sbjct: 88  YVSVETHI-VCGKCYACRRGQYHVC-------QNTKIFGVDTDGVFAEYAVVPAQNIWKN 139
Query: 153 PEGTPLDATA---PLLCAGITVYS-PLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGV 208
           P+  P +      PL  A  TV + P+        G                  AKA G 
Sbjct: 140 PKSIPPEYATLQEPLGNAVDTVLAGPIS-------GKSVLITGAGPLGLLGIAVAKASGA 192
Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
              ++S     + E  +++GAD  +   ++D ++      DG
Sbjct: 193 YPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVXDITDG 234

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  +V    +CH+D++   +     ++P+V GHE  G+V  VG  V+ FK GDKV +  
Sbjct: 35  EVRIQVIATCVCHTDINA-TDPKKKALFPVVLGHECAGIVESVGPGVTNFKPGDKV-IPF 92
Query: 99  MVGSCRSCDSCAIDLENYCPKV 120
               C+ C  C   L N C K+
Sbjct: 93  FAPQCKRCKLCLSPLTNLCGKL 114

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 11/141 (7%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEW--GNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  ++  +V    IC +DLH+ K + W  G    P+V GHE  GVV  VG  V + +VGD
Sbjct: 24  GPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGD 83
Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
            V +   +  C +C +C     + C        N    G    GG+++ +V         
Sbjct: 84  HVSLESHI-VCHACPACRTGNYHVC-------LNTQILGVDRDGGFAEYVVVPAENAWVN 135
Query: 153 PEGTPLDATAPLLCAGITVYS 173
           P+  P +  A L   G  V++
Sbjct: 136 PKDLPFEVAAILEPFGNAVHT 156

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 60/148 (40%), Gaps = 16/148 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD  ++      T  P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVATGICRSDDQVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
               C  C  C     N+C K  ++       DGT  +               +S   V 
Sbjct: 93  FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
           DE  V +I   +PL+    + C   T Y
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGY 180

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 15/148 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+    +CH+D + +        +P++ GH   G+V  VG  V+K K GD V +  
Sbjct: 33  EVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKAGDTV-IPL 91
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGT----------ITYGG---YSDIMVA 144
            +  C  C  C     N C K+ +T       DGT          + Y G   +S+  V 
Sbjct: 92  YIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVV 151
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
            +  V +I    PLD    L C   T Y
Sbjct: 152 ADISVAKIDPLAPLDKVCLLGCGISTGY 179

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 79/207 (38%), Gaps = 36/207 (17%)
Query: 24  VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGS 83
           VL    F   A G + V  +    G+   D +     +     P   G E  GVV  VG 
Sbjct: 15  VLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGD 74
Query: 84  KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMV 143
           +V++FKVGD+V  G                                  T   G YS++ V
Sbjct: 75  EVTRFKVGDRVAYG----------------------------------TGPLGAYSEVHV 100
Query: 144 ADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG-MXXXXXXXXXXXXXXXKF 202
             E  +V++ +    +  A L+  G+TV   LR     KPG +               ++
Sbjct: 101 LPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQW 160
Query: 203 AKAMGVKVTVISTSPSKKSEAIERLGA 229
           AKA+G K+    +SP K + A + LGA
Sbjct: 161 AKALGAKLIGTVSSPEKAAHA-KALGA 186

>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 11/124 (8%)
Query: 37  EKDVTFKVTHCGICHSDL-HMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           + +V  K+   G+C SDL  + KN  G   YPI  GHE  G +  VGS V     GD V 
Sbjct: 25  QDEVRVKIASSGLCGSDLPRIFKN--GAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVA 82
Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
              ++  C +C  C     + C K           G+   GG+++ +V     V  +P  
Sbjct: 83  CVPLL-PCFTCPECLKGFYSQCAKYDFI-------GSRRDGGFAEYIVVKRKNVFALPTD 134
Query: 156 TPLD 159
            P++
Sbjct: 135 MPIE 138

>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase Length = 398

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 37  EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96
           E  V  KV    IC SD HM++      +  +V GHEI G V E G  V   ++GD V V
Sbjct: 33  EHGVILKVVSTNICGSDQHMVRGRTTAQV-GLVLGHEITGEVIEKGRDVENLQIGDLVSV 91
Query: 97  GCMV--GSCRSC 106
              V  G CRSC
Sbjct: 92  PFNVACGRCRSC 103

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 85/209 (40%), Gaps = 13/209 (6%)
Query: 35  TGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
            GE D+  +     + + D  +++   G +  +P VP  +  GVV  VG  V++F+ GD+
Sbjct: 51  AGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVPASDXSGVVEAVGKSVTRFRPGDR 110
Query: 94  VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP 153
           V      G           L+   P    T A +   G    G  S+ +V  E + V  P
Sbjct: 111 VISTFAPGW----------LDGLRPGTGRTPAYETLGGA-HPGVLSEYVVLPEGWFVAAP 159
Query: 154 EGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVI 213
           +       + L CAG+T +  L   G  + G                + AKA G +V V 
Sbjct: 160 KSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVT 219
Query: 214 STSPSKKSEAIERLGADSFLVSRDQDEMQ 242
           S+S  K   A   LGAD  +   ++D ++
Sbjct: 220 SSSREKLDRAFA-LGADHGINRLEEDWVE 247

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 12  NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPG 71
           N  GW  K+           R   G  D   +      C SD+H +          ++ G
Sbjct: 10  NKLGWIEKE-----------RPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILG 58
Query: 72  HEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYHD 130
           HE VG V EVGS+V  FK GD+V V C     RS +  A   + +   ++  +  + + D
Sbjct: 59  HEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQA-GFQQHSNGMLAGWKFSNFKD 117
Query: 131 GTITYGGYSDIMVADEHFVVRIPEGTPLD 159
           G   +G Y  +  AD +  + +P+  PL+
Sbjct: 118 G--VFGEYFHVNDADMNLAI-LPKDMPLE 143

>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From Thermotoga Maritima Length = 404

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/232 (21%), Positives = 83/232 (35%), Gaps = 26/232 (11%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEW-------GNTIYPIVPGHEIVGVVTEVGSKVSKFKVG 91
           ++  KV  CGIC SD+H  + +        G T +P+  GHE  GVV E G +    +  
Sbjct: 57  EIIIKVKACGICGSDVHXAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTN 116
Query: 92  DKVGVGCMVGS-----CRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADE 146
            +  +G  V +     C  C  CA    N+C        N    G    G +++ +  D 
Sbjct: 117 KRFEIGEPVCAEEXLWCGHCRPCAEGFPNHC-------ENLNELGFNVDGAFAEYVKVDA 169
Query: 147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFY-------GLDKPGMXXXXXXXXXXXXXX 199
            +   + E   +     L  AG  V      Y       G  +PG               
Sbjct: 170 KYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAA 229
Query: 200 XKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI 251
               K  G    ++S     +    + LGAD  +    ++ ++A +   +G+
Sbjct: 230 VAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGL 281

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  +V    +C +D++   +     ++P+V GHE  G+V  VG  V+ FK GDKV +  
Sbjct: 35  EVRIQVIATCVCPTDINA-TDPKKKALFPVVLGHECAGIVESVGPGVTNFKPGDKV-IPF 92
Query: 99  MVGSCRSCDSCAIDLENYCPKV 120
               C+ C  C   L N C K+
Sbjct: 93  FAPQCKRCKLCLSPLTNLCGKL 114

>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 12  NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPG 71
           N  GW  K+           R   G  D   +      C SD+H +          ++ G
Sbjct: 10  NKLGWIEKE-----------RPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILG 58
Query: 72  HEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYHD 130
           HE VG V EVGS+V  FK GD+V V C     RS +  A   + +   ++  +  + + D
Sbjct: 59  HEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQA-GFQQHSNGMLAGWKFSNFKD 117
Query: 131 GTITYGGYSDIMVADEHFVVRIPEGTPLD 159
           G   +G Y  +  AD +  + +P+  PL+
Sbjct: 118 G--VFGEYFHVNDADMNLAI-LPKDMPLE 143

>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 12  NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPG 71
           N  GW  K+           R   G  D   +      C SD+H +          ++ G
Sbjct: 10  NKLGWIEKE-----------RPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILG 58
Query: 72  HEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYHD 130
           HE VG V EVGS+V  FK GD+V V C     RS +  A   + +   ++  +  + + D
Sbjct: 59  HEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQA-GFQQHSNGMLAGWKFSNFKD 117
Query: 131 GTITYGGYSDIMVADEHFVVRIPEGTPLD 159
           G   +G Y  +  AD +  + +P+  PL+
Sbjct: 118 G--VFGEYFHVNDADMNLAI-LPKDMPLE 143

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 21/254 (8%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  ++   GIC SD+H  +    GN I   P+V GHE  G V +VGS V   K GD
Sbjct: 30  GPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGD 89
Query: 93  KVGVGCMVGSCRSCDS-CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVR 151
           +V +    G+ R  D  C +   N  P +    A    DG +           +  F  +
Sbjct: 90  RVAI--EPGAPRENDEFCKMGRYNLSPSIFFC-ATPPDDGNLC-----RFYKHNAAFCYK 141
Query: 152 IPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVT 211
           +P+    +  A +    + +++  R  G    G                  AKAMG    
Sbjct: 142 LPDNVTFEEGALIEPLSVGIHACRR--GGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQV 199
Query: 212 VISTSPSKKSEAIERLGADSFL-VSRDQDE-----MQAAMGTMDGI-IDTVSAVHPLMPL 264
           V++   + +    + +GAD  L +S++  +     ++  +G    + I+   A   +   
Sbjct: 200 VVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAG 259
Query: 265 IGLLKSQGKLVLVG 278
           I   +S G LVLVG
Sbjct: 260 IYATRSGGTLVLVG 273

>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 14/148 (9%)
Query: 12  NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPG 71
           N  GW  K+           R   G  D   +      C SD+H +          ++ G
Sbjct: 10  NKLGWIEKE-----------RPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILG 58
Query: 72  HEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDG 131
           HE VG V EVGS+V  FK GD+V V C     RS +  A   ++    +     + + DG
Sbjct: 59  HEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFPQHSNGMLAGWKFSNFKDG 118
Query: 132 TITYGGYSDIMVADEHFVVRIPEGTPLD 159
              +G Y  +  AD +  + +P+  PL+
Sbjct: 119 --VFGEYFHVNDADMNLAI-LPKDMPLE 143

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 111/265 (41%), Gaps = 43/265 (16%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIKN-EWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  K+   GIC SD+H  ++   G+ +   P+V GHE  G V +VGS V   + GD
Sbjct: 29  GPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVLGHEASGTVVKVGSLVRHLQPGD 88
Query: 93  KVGVGCMVGSCRSCDS-CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVR 151
           +V +    G+ R  D  C I   N  P +    A    DG +           + +F  +
Sbjct: 89  RVAI--QPGAPRQTDEFCKIGRYNLSPTIFFC-ATPPDDGNLC-----RFYKHNANFCYK 140
Query: 152 IPEGTPLDATA---PLLC-------AGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXK 201
           +P+    +  A   PL         AG+T+ + +   G    G+                
Sbjct: 141 LPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVNLLA----------- 189
Query: 202 FAKAMG-VKVTVISTSPSKKSEAIERLGADSFL-VSRDQDE-----MQAAMGTMDGI-ID 253
            AKAMG  +V V   S S+ S+A E +GAD  L +S +  E     ++  +G+   + I+
Sbjct: 190 -AKAMGAAQVVVTDLSASRLSKAKE-VGADFILEISNESPEEIAKKVEGLLGSKPEVTIE 247
Query: 254 TVSAVHPLMPLIGLLKSQGKLVLVG 278
                  +   I    S G LVLVG
Sbjct: 248 CTGVETSIQAGIYATHSGGTLVLVG 272

>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase Length = 398

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Query: 29  HFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI--VPGHEIVGVVTEVGSKVS 86
           H +R+   E  V  KV    IC SD H+ +   G  I P   V GHEI G V E GS V 
Sbjct: 26  HNNRKL--EHAVILKVVSTNICGSDQHIYR---GRFIVPKGHVLGHEITGEVVEKGSDVE 80
Query: 87  KFKVGDKVGVGCMV--GSCRSC-----DSCAIDLEN 115
              +GD V V   V  G CR+C     D C  +L N
Sbjct: 81  LMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVN 116

>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase Length = 363

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 37  EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI------VPGHEIVGVVTEVGSKVSKFKV 90
           E +VT  V   GIC SD+H  K+     I P+      V GHE  G V  V   V   KV
Sbjct: 40  EGEVTVAVRSTGICGSDVHFWKH---GCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKV 96
Query: 91  GDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
           GD+V +   V  C +C+ C     N C +V
Sbjct: 97  GDRVAIEPQV-ICNACEPCLTGRYNGCERV 125

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 100/254 (39%), Gaps = 21/254 (8%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  +    GIC SD+H  +    GN I   P V GHE  G V +VGS V   K GD
Sbjct: 30  GPNEVLLRXHSVGICGSDVHYWEYGRIGNFIVKKPXVLGHEASGTVEKVGSSVKHLKPGD 89
Query: 93  KVGVGCMVGSCRSCDS-CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVR 151
           +V +    G+ R  D  C     N  P +    A    DG +           +  F  +
Sbjct: 90  RVAI--EPGAPRENDEFCKXGRYNLSPSIFFC-ATPPDDGNLC-----RFYKHNAAFCYK 141
Query: 152 IPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVT 211
           +P+    +  A +    + +++  R  G    G                  AKA G    
Sbjct: 142 LPDNVTFEEGALIEPLSVGIHACRR--GGVTLGHKVLVCGAGPIGXVTLLVAKAXGAAQV 199
Query: 212 VISTSPSKKSEAIERLGADSFL-VSRDQDE-----MQAAMGTMDGI-IDTVSAVHPLMPL 264
           V++   + +    + +GAD  L +S++  +     ++  +G    + I+   A   +   
Sbjct: 200 VVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAG 259
Query: 265 IGLLKSQGKLVLVG 278
           I   +S G LVLVG
Sbjct: 260 IYATRSGGTLVLVG 273

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 65/295 (22%), Positives = 110/295 (37%), Gaps = 63/295 (21%)
Query: 23  GVLSPFHFSRRATGEK---DVTFKVTHCGICHSDLHMIKNEWGNT-IYPIVPGHEIVGVV 78
           G L+     R+A  E    ++  +V  CG+   DL + +    N    P+VPG E  G+V
Sbjct: 13  GGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIV 72
Query: 79  TEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGY 138
             +G  V  +++GD+V                           M + N        Y  +
Sbjct: 73  EALGDSVKGYEIGDRV---------------------------MAFVN--------YNAW 97
Query: 139 SDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXX 198
           ++++     FV +IP+       A      +T Y  L      + GM             
Sbjct: 98  AEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQ 157
Query: 199 XXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ-----AAMGTMDGIID 253
                 +    VTV  T+ + K EAI+   + + L  R+ D +Q     +A G +D ++D
Sbjct: 158 AVAQLCSTVPNVTVFGTASTFKHEAIK--DSVTHLFDRNADYVQEVKRISAEG-VDIVLD 214
Query: 254 TVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEED------SWWQ 302
            +   +    L  LLK  G  +L G+          +++ GE +       SWWQ
Sbjct: 215 CLCGDNTGKGL-SLLKPLGTYILYGSS---------NMVTGETKSFFSFAKSWWQ 259

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	314
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	0.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	0.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	0.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	1e-179
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	1e-173
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	1e-134
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	1e-132
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	1e-132
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	8e-69
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	4e-68
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	5e-68
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	7e-65
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	2e-43
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	1e-42
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	2e-42
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	2e-41
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	1e-39
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	1e-38
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	1e-37
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	8e-37
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	3e-36
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	2e-35
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	4e-35
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	7e-35
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	1e-34
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	2e-34
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	2e-34
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	7e-34
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	4e-32
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	6e-32
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	2e-31
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	3e-29
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	1e-28
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	3e-27
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	1e-26
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	3e-26
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	5e-25
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	6e-25
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	8e-25
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	5e-24
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	7e-23
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	1e-22
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	7e-22
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	1e-21
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	1e-21
3gms_A	340	Putative NADPH:quinone reductase; structural genom	2e-21
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	5e-21
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	1e-20
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	2e-20
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	2e-19
4eye_A	342	Probable oxidoreductase; structural genomics, niai	5e-19
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	4e-18
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	6e-18
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	1e-17
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	2e-17
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	2e-16
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	4e-16
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	9e-16
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	2e-14
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	3e-14
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	2e-11
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	2e-11
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	7e-10
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	5e-08
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	7e-08
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	2e-06
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	9e-05
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	1e-04
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	1e-04
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	2e-04
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	2e-04
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	2e-04
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	3e-04
1id1_A	153	Putative potassium channel protein; RCK domain, E.	5e-04
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	6e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score =  546 bits (1410), Expect = 0.0
 Identities = 223/294 (75%), Positives = 261/294 (88%)

Query: 1   MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
           M ++PE+EHP  AFGWAA+D SG LSPF+FSRRATGE+DV FKV +CG+CHSDLH IKN+
Sbjct: 5   MSKSPEEEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKND 64

Query: 61  WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
           WG ++YP+VPGHEIVG VTEVGSKV K  VGDKVGVGC+VG+C SC+SCA DLENYCPK+
Sbjct: 65  WGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKM 124

Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
           I+TYA+ YHDGTITYGGYS+ MVA+E +++R P+  PLD  APLLCAGITVYSPL+++GL
Sbjct: 125 ILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGL 184

Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
           D+PG H+G+VGLGGLGHVAVKFAKA G KVTVISTSPSKK EA++  GADSFLVSRDQ++
Sbjct: 185 DEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQ 244

Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMG 294
           MQAA GT+DGIIDTVSAVHPL+PL GLLKS GKL+LVGAPEKPLELPAFSL+ G
Sbjct: 245 MQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAG 298

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score =  527 bits (1361), Expect = 0.0
 Identities = 147/287 (51%), Positives = 196/287 (68%)

Query: 8   EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP 67
           E  +   GWAA+D SG+LSP+ ++ R TG +DV  ++  CGICH+DLH  KN+ G + YP
Sbjct: 5   EAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYP 64

Query: 68  IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK 127
           +VPGHE+VG V EVGS VSKF VGD VGVGC+VG C  C  C  DLE YCPK I +Y + 
Sbjct: 65  MVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDV 124

Query: 128 YHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHV 187
           Y +G  T GG++   V  + FVV+IPEG  ++  APLLCAG+TVYSPL  +GL +PG+  
Sbjct: 125 YINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRG 184

Query: 188 GVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT 247
           G++GLGG+GH+ VK AKAMG  VTVIS+S  K+ EA++ LGAD +++  DQ +M     +
Sbjct: 185 GILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADS 244

Query: 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMG 294
           +D +IDTV   H L P + LLK  GKL+L+G    PL+     L++G
Sbjct: 245 LDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLG 291

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score =  504 bits (1301), Expect = 0.0
 Identities = 133/295 (45%), Positives = 174/295 (58%), Gaps = 5/295 (1%)

Query: 3   QAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG 62
            +  ++         A      L P   +RR  G  DV  ++ +CG+CHSDLH +++EW 
Sbjct: 13  TSLYKKAGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWA 72

Query: 63  NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIM 122
            T+YP VPGHEIVG V  VG +V K+  GD VGVGC+V SC+ C+ C   LENYC  +  
Sbjct: 73  GTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTG 132

Query: 123 TYANKYHDGT-ITYGGYSDIMVADEHFVVRIPEG-TPLDATAPLLCAGITVYSPLRFYGL 180
           TY +   D    T GGYS  +V  E +V+RI      L A APLLCAGIT YSPLR +  
Sbjct: 133 TYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQA 192

Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
             PG  VGVVG+GGLGH+ +K A AMG  V   +TS +K+  A + LGAD  + SR+ DE
Sbjct: 193 -GPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KALGADEVVNSRNADE 250

Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELP-AFSLLMG 294
           M A + + D I++TV+A H L     LLK  G + LVGAP  P + P  F+L+M 
Sbjct: 251 MAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMK 305

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score =  499 bits (1287), Expect = e-179
 Identities = 108/293 (36%), Positives = 157/293 (53%), Gaps = 8/293 (2%)

Query: 8   EHPKNAFGWAAKDTSGV--LSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTI 65
            +P+   G A +            +  +   + D+  K+  CG+C SD+H     WGN  
Sbjct: 2   SYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMK 61

Query: 66  YPIVPGHEIVGVVTEVGSKV-SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY 124
            P+V GHEIVG V ++G K  S  KVG +VGVG  V SC  CD C  D E YC K + TY
Sbjct: 62  MPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTY 121

Query: 125 ANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG 184
           +  Y DG ++ GGY++ +   EHFVV IPE  P    APLLC G+TVYSPL   G   PG
Sbjct: 122 SQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNGC-GPG 180

Query: 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-DEMQA 243
             VG+VGLGG+G +    +KAMG +  VIS S  K+ +A+ ++GAD ++ + ++ D  + 
Sbjct: 181 KKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADHYIATLEEGDWGEK 239

Query: 244 AMGTMDGIIDTVSAVHPL--MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMG 294
              T D I+   S++  +    +   +K  G++V +  PE+   L      + 
Sbjct: 240 YFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLK 292

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score =  482 bits (1243), Expect = e-173
 Identities = 118/288 (40%), Positives = 161/288 (55%), Gaps = 11/288 (3%)

Query: 10  PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIV 69
              + G+A         P  FSR A G +DV   + + GICHSD+H   +EW   IYP++
Sbjct: 2   RVQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMI 61

Query: 70  PGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY--ANK 127
           PGHEI G++ EVG  V KFK+GD VGVGC V SC++C  C    E +C KV+ TY   + 
Sbjct: 62  PGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDS 121

Query: 128 YHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHV 187
           +HD     GGYS+ +V DE++V+ + +  PL+  APLLCAGIT YSPL+F  +   G  V
Sbjct: 122 FHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSKV-TKGTKV 180

Query: 188 GVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT 247
           GV G GGLG +AVK+A AMG +V+V + +  KK +A+  +G   F     Q         
Sbjct: 181 GVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-SMGVKHFYTDPKQ-----CKEE 234

Query: 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLE--LPAFSLLM 293
           +D II T+   + L   + LL   G L LVG P   +   L  F  + 
Sbjct: 235 LDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIH 282

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  384 bits (988), Expect = e-134
 Identities = 89/285 (31%), Positives = 135/285 (47%), Gaps = 13/285 (4%)

Query: 15  GWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHE 73
               +     L      +      +V  ++  CG+CH+DLH    +W      P++PGHE
Sbjct: 3   AAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHE 62

Query: 74  IVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI 133
            VG+V EVG  V+  KVGD+VG+  +  +C  CD C    E  C             G  
Sbjct: 63  GVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA-------GYS 115

Query: 134 TYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLG 193
             GGY++   A   +VV+IP+    +  AP+ CAG+T Y  L+  G  KPG  V + G+G
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIG 174

Query: 194 GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGTMDG 250
           GLGHVAV++AKAMG+ V  +     K   A + LGAD  +    +D    M+  +G +  
Sbjct: 175 GLGHVAVQYAKAMGLNVVAVDIGDEKLELA-KELGADLVVNPLKEDAAKFMKEKVGGVHA 233

Query: 251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGE 295
            + T  +          ++  G  VLVG P + + +P F  ++  
Sbjct: 234 AVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNG 278

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  379 bits (975), Expect = e-132
 Identities = 94/283 (33%), Positives = 142/283 (50%), Gaps = 13/283 (4%)

Query: 17  AAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIV 75
             +     L+         G   V  K+   G+CH+DLH    +W      P +PGHE V
Sbjct: 7   VVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGV 66

Query: 76  GVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY 135
           G V+ VGS VS+ K GD+VGV  +  +C  C+ C    E  C K   T       G    
Sbjct: 67  GYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNT-------GYSVN 119

Query: 136 GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGL 195
           GGY + +VAD ++V  +P+       AP+LCAG+TVY  L+     +PG  V + G+GGL
Sbjct: 120 GGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVTDT-RPGQWVVISGIGGL 178

Query: 196 GHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGTMDGII 252
           GHVAV++A+AMG++V  +    +K + A  RLGA+  + +RD D    +Q  +G   G++
Sbjct: 179 GHVAVQYARAMGLRVAAVDIDDAKLNLA-RRLGAEVAVNARDTDPAAWLQKEIGGAHGVL 237

Query: 253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGE 295
            T  +       IG+++  G + L G P      P F +++  
Sbjct: 238 VTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKG 280

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  378 bits (972), Expect = e-132
 Identities = 85/293 (29%), Positives = 133/293 (45%), Gaps = 17/293 (5%)

Query: 10  PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPI 68
           P+   G    ++ G L             ++   V + G+CH+DLH    +W      P+
Sbjct: 3   PETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPL 62

Query: 69  VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY 128
           V GHE  GVV  +G  V  +K+GD  G+  + GSC +C+ C +  E+ CP   ++     
Sbjct: 63  VGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLS----- 117

Query: 129 HDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVG 188
             G    G +     AD      IP+GT L   AP+LCAGITVY  L+   L   G  V 
Sbjct: 118 --GYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANL-MAGHWVA 174

Query: 189 VVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE-----MQ 242
           + G  GGLG +AV++AKAMG +V  I     K+      +G + F+    + +     ++
Sbjct: 175 ISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSIGGEVFIDFTKEKDIVGAVLK 233

Query: 243 AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMG 294
           A  G   G+I+   +   +      +++ G  VLVG P         F+ ++ 
Sbjct: 234 ATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVK 286

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  217 bits (554), Expect = 8e-69
 Identities = 71/269 (26%), Positives = 106/269 (39%), Gaps = 18/269 (6%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGN--TIYPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
             ++V  ++   G+C +DL + K          PI+ GHE  G + EVG  ++K K GD 
Sbjct: 27  QGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGE-LAKVKKGDN 85

Query: 94  VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP 153
           V V        +C  C     N C   I+        G  T GG+S+ M+      +   
Sbjct: 86  VVVY-ATWGDLTCRYCREGKFNICKNQIIP-------GQTTNGGFSEYMLVKSSRWLVKL 137

Query: 154 EGTPLDATAPLLCAGITVYSPLR---FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKV 210
                   APL  AG T    +R    +        V V G+GGL    ++  KA+   +
Sbjct: 138 NSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNI 197

Query: 211 TVISTSPSK-KSEAIERLGADSFLVSRDQDE--MQAAMGTM-DGIIDTVSAVHPLMPLIG 266
           T++  S SK   +    LGAD     +D +    +   G      ID V        L  
Sbjct: 198 TIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTEETTYNLGK 257

Query: 267 LLKSQGKLVLVGAPEKPLELPAFSLLMGE 295
           LL  +G ++LVG   K + L AF   +  
Sbjct: 258 LLAQEGAIILVGMEGKRVSLEAFDTAVWN 286

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  215 bits (549), Expect = 4e-68
 Identities = 81/275 (29%), Positives = 116/275 (42%), Gaps = 25/275 (9%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTI--------YPIVPGHEIVGVVTEVGSKVSK 87
               V  KV   G+CHSD+HM +  +GN           P+  GHEI G + EVG +V  
Sbjct: 24  KGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVG 83

Query: 88  FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH 147
           +  GD V V    G   +C  C I  E+ C             G    G Y++ ++   +
Sbjct: 84  YSKGDLVAVNPWQG-EGNCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHY 135

Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAM 206
             +           APL C+GIT Y  +R   L  P   + VVG  GGLG +AV+ AKA+
Sbjct: 136 KYMYKLRRLNAVEAAPLTCSGITTYRAVRKASL-DPTKTLLVVGAGGGLGTMAVQIAKAV 194

Query: 207 -GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHP 260
            G  +  +        EA +R GAD  + +  QD +           +D +ID  ++   
Sbjct: 195 SGATIIGVDVREEAV-EAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKT 253

Query: 261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGE 295
           L      L  QGK V+VG     L   A  + + E
Sbjct: 254 LSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSE 288

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  215 bits (550), Expect = 5e-68
 Identities = 74/275 (26%), Positives = 122/275 (44%), Gaps = 22/275 (8%)

Query: 33  RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIY---PIVPGHEIVGVVTEVGSKVSKFK 89
           R  G  DV  ++   G+CH+DLH+++  W   +    P   GHE VG + EV   V   +
Sbjct: 37  RLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE 96

Query: 90  VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149
            GD V +     +  +C +C    + +C  +          G    GG+++ M      V
Sbjct: 97  KGDPVIL-HPAVTDGTCLACRAGEDMHCENLEFP-------GLNIDGGFAEFMRTSHRSV 148

Query: 150 VRIPEGTPLDAT---APLLCAGITVYSPLRFYGLD-KPGMHVGVVGLGGLGHVAVKFAKA 205
           +++P+    +     APL  AGIT Y  ++       PG +V +VG+GGLGH+AV+  K 
Sbjct: 149 IKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKV 208

Query: 206 MG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQAAMGTM--DGIIDTVSAVHP 260
           M    V  +     K  +  ERLGAD  + +R     ++         +  +D V +   
Sbjct: 209 MTPATVIALDVKEEKL-KLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQAT 267

Query: 261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGE 295
           +     LL   G+L++VG   + L  P   ++  E
Sbjct: 268 VDYTPYLLGRMGRLIIVGYGGE-LRFPTIRVISSE 301

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  206 bits (527), Expect = 7e-65
 Identities = 70/268 (26%), Positives = 111/268 (41%), Gaps = 12/268 (4%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWG--NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
           G  ++  KVT  G+CHSD+ ++           P+  GHE VG V E+G  V+ F VGD 
Sbjct: 24  GPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDA 83

Query: 94  VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP 153
           V V      C +C +CA   ENYC +           G  + G  ++ M+ D    +   
Sbjct: 84  VAV-YGPWGCGACHACARGRENYCTRAAD--LGITPPGLGSPGSMAEYMIVDSARHLVPI 140

Query: 154 EGTPLDATAPLLCAGITVYSPLRFYGLD-KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVT 211
                 A APL  AG+T Y  +        PG    V+G+GGLGHV ++  +A+   +V 
Sbjct: 141 GDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVI 200

Query: 212 VISTSPSKKSEAIERLGADSFLVSRDQ--DEMQAAMGTM--DGIIDTVSAVHPLMPLIGL 267
            +     +       +GAD+ + S     D ++   G      + D V A   +     +
Sbjct: 201 AVDLDDDRL-ALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQSTIDTAQQV 259

Query: 268 LKSQGKLVLVGAPEKPLELPAFSLLMGE 295
           +   G + +VG          F ++   
Sbjct: 260 VAVDGHISVVGIHAGAHAKVGFFMIPFG 287

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  151 bits (384), Expect = 2e-43
 Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 36/277 (12%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  D+  KV  CGIC +D H++  E+  +  P+  GHE  G+V E GS V     G ++ 
Sbjct: 46  GPDDLLVKVEACGICGTDRHLLHGEFP-STPPVTLGHEFCGIVVEAGSAVRDIAPGARI- 103

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
            G    SC  C  C     N C  +          G    GG+++ ++        IP  
Sbjct: 104 TGDPNISCGRCPQCQAGRVNLCRNLRAI-------GIHRDGGFAEYVLVPRKQAFEIPLT 156

Query: 156 TPLDATA---PLLCAGITVYSPLRFYGLDK----PGMHVGVVGLGGLGHVAVKFAKAMGV 208
                 A   PL C           +G+D      G  V ++G G +G + V+ A+  G 
Sbjct: 157 LDPVHGAFCEPLACC---------LHGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGA 207

Query: 209 -KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-------IIDTVSAVHP 260
             V + +   +K+  A E +GA + +     D ++A  G +         +I+       
Sbjct: 208 TTVILSTRQATKRRLA-EEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAET 266

Query: 261 LMPLIGLLKSQGKLVLVG--APEKPLELPAFSLLMGE 295
           +     L K+ G +V++G     + +E+  F +L  E
Sbjct: 267 VKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRE 303

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  149 bits (379), Expect = 1e-42
 Identities = 76/282 (26%), Positives = 117/282 (41%), Gaps = 25/282 (8%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS-----KFKV 90
               +  ++   G+C SD+HM + E      PI+ GHE  G V EV  +         K 
Sbjct: 41  PRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKP 100

Query: 91  GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY----GGYSD-IMVAD 145
           GD + V     +C  C  C +  E Y       Y    + G   Y    G YS  I++  
Sbjct: 101 GDLI-VWNRGITCGECYWCKVSKEPYLCPNRKVYG--INRGCSEYPHLRGCYSSHIVLDP 157

Query: 146 EHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA 205
           E  V+++ E   LD  A  +C+G T Y     Y     G  V + G G LG   V  A++
Sbjct: 158 ETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARS 217

Query: 206 MG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQAAMGTM------DGIIDTVS 256
           +G   V VI+ SP++   A E +GAD  L  R+    E + A+  +      D I++   
Sbjct: 218 LGAENVIVIAGSPNRLKLA-EEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATG 276

Query: 257 AVHPLMPLIGLLKSQGKLVLVG--APEKPLELPAFSLLMGEE 296
               L+    LL+  G   + G   P+ P+    +  L+ + 
Sbjct: 277 DSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKN 318

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  148 bits (376), Expect = 2e-42
 Identities = 68/273 (24%), Positives = 115/273 (42%), Gaps = 27/273 (9%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEWGNTI--YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  KV    IC +DLH+ + NEW  +    P + GHE+ G V E+G  V   +VGD
Sbjct: 28  GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEGIEVGD 87

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
            V V   +  C  C +C     + C    +        G  T G +++  V     + + 
Sbjct: 88  YVSVETHI-VCGKCYACRRGQYHVCQNTKIF-------GVDTDGVFAEYAVVPAQNIWKN 139

Query: 153 PEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV- 208
           P+  P +      PL  A   V + L        G  V + G G LG + +  AKA G  
Sbjct: 140 PKSIPPEYATLQEPLGNA---VDTVLAG---PISGKSVLITGAGPLGLLGIAVAKASGAY 193

Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMP 263
            V V   S  ++  A +++GAD  +   ++D ++  M   DG      ++   A   L  
Sbjct: 194 PVIVSEPSDFRRELA-KKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGAPKALEQ 252

Query: 264 LIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
            +  +   G++ L+G     + +   +L++ + 
Sbjct: 253 GLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKA 285

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  146 bits (370), Expect = 2e-41
 Identities = 63/263 (23%), Positives = 103/263 (39%), Gaps = 24/263 (9%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
            + +V  K+   G+C SDL  I    G   YPI  GHE  G +  VGS V     GD V 
Sbjct: 24  HQDEVRVKIASSGLCGSDLPRIFKN-GAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAV- 81

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
               +  C +C  C     + C K           G+   GG+++ +V     V  +P  
Sbjct: 82  ACVPLLPCFTCPECLKGFYSQCAKYDFI-------GSRRDGGFAEYIVVKRKNVFALPTD 134

Query: 156 TPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVT 211
            P++  A   P+      +++            +V ++G G +G +A++ A A+G   VT
Sbjct: 135 MPIEDGAFIEPITVG---LHAFHL--AQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVT 189

Query: 212 VISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLIG 266
            I  S  K + A +  GA     S +    Q      +      I++T      +   + 
Sbjct: 190 AIDISSEKLALA-KSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAGVPQTVELAVE 248

Query: 267 LLKSQGKLVLVGAPEKPLELPAF 289
           +     +L LVG   + L L + 
Sbjct: 249 IAGPHAQLALVGTLHQDLHLTSA 271

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  141 bits (358), Expect = 1e-39
 Identities = 55/270 (20%), Positives = 94/270 (34%), Gaps = 27/270 (10%)

Query: 33  RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP-----IVPGHEIVGVVTEVGSKVSK 87
           +      +  +  + GIC +D  ++  +   +  P     +V GHE +GVV E       
Sbjct: 22  KLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEES---YHG 78

Query: 88  FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH 147
           F  GD V        C  C +C +   ++C       A  +       G   +    D  
Sbjct: 79  FSQGDLVMPVNRR-GCGICRNCLVGRPDFCETGEFGEAGIHK----MDGFMREWWYDDPK 133

Query: 148 FVVRIPEGTPLDA--TAPLLCA---------GITVYSPLRFYGLDKPGMHVGVVGLGGLG 196
           ++V+IP+          PL                               V VVG G +G
Sbjct: 134 YLVKIPKSIEDIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIG 193

Query: 197 HVAVKFAKAMGVKVTVISTS--PSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDT 254
            +     +  G++V + +       +   IE    + +  S   D+++ ++G  D IID 
Sbjct: 194 VLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDA 253

Query: 255 V-SAVHPLMPLIGLLKSQGKLVLVGAPEKP 283
             + V+ L  +I LL   G L L G     
Sbjct: 254 TGADVNILGNVIPLLGRNGVLGLFGFSTSG 283

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  138 bits (351), Expect = 1e-38
 Identities = 76/275 (27%), Positives = 115/275 (41%), Gaps = 28/275 (10%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKN-EWGNTI--YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
            E +V  ++ + GIC SD+H  ++    + I   P+V GHE  G V +VG  V   K GD
Sbjct: 27  KEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGD 86

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
           +V V   V  CR C  C     N CP   +T+     D     G  +   V    F  ++
Sbjct: 87  RVAVEPGV-PCRRCQFCKEGKYNLCPD--LTFCATPPDD----GNLARYYVHAADFCHKL 139

Query: 153 PEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK 209
           P+   L+  A   PL      V++  R     + G  V V+G G +G V+V  AKA G  
Sbjct: 140 PDNVSLEEGALLEPLSVG---VHACRR--AGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF 194

Query: 210 VTVISTSPSKKSEAIERLGADSFLV--SRDQDEMQAAM-------GTMDGIIDTVSAVHP 260
           V   + SP +   A +  GAD  LV     ++E               +  ID       
Sbjct: 195 VVCTARSPRRLEVA-KNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKC 253

Query: 261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGE 295
           +   I + ++ G L+LVG   + + +P  +    E
Sbjct: 254 ITIGINITRTGGTLMLVGMGSQMVTVPLVNACARE 288

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  136 bits (344), Expect = 1e-37
 Identities = 56/271 (20%), Positives = 104/271 (38%), Gaps = 24/271 (8%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEWGNTI--YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  ++  +V    IC +DLH+ K + W       P+V GHE  GVV  VG  V + +VGD
Sbjct: 24  GPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGD 83

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
            V +   +  C +C +C     + C    +        G    GG+++ +V         
Sbjct: 84  HVSLESHI-VCHACPACRTGNYHVCLNTQIL-------GVDRDGGFAEYVVVPAENAWVN 135

Query: 153 PEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV- 208
           P+  P +  A   P   A   V++          G  V + G G +G +A    +A G  
Sbjct: 136 PKDLPFEVAAILEPFGNA---VHTVYAG-SG-VSGKSVLITGAGPIGLMAAMVVRASGAG 190

Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRD--QDEMQAAMGT-MDGIIDTVSAVHPLMPLI 265
            + V   +P + + A             +   + ++   G+ ++ +++       +   +
Sbjct: 191 PILVSDPNPYRLAFA-RPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGL 249

Query: 266 GLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
             L   G+  ++G P  P+       L+   
Sbjct: 250 MALIPGGEARILGIPSDPIRFDLAGELVMRG 280

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  133 bits (338), Expect = 8e-37
 Identities = 72/274 (26%), Positives = 111/274 (40%), Gaps = 27/274 (9%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKN-EWGNTI--YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  ++   GIC SD+H  +    GN I   P+V GHE  G V +VGS V   K GD
Sbjct: 30  GPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGD 89

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
           +V +        + + C +   N  P   + +     D     G        +  F  ++
Sbjct: 90  RVAIEPGA-PRENDEFCKMGRYNLSPS--IFFCATPPDD----GNLCRFYKHNAAFCYKL 142

Query: 153 PEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV- 208
           P+    +  A   PL      +++  R  G    G  V V G G +G V +  AKAMG  
Sbjct: 143 PDNVTFEEGALIEPLSVG---IHACRR--GGVTLGHKVLVCGAGPIGMVTLLVAKAMGAA 197

Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM-------GTMDGIIDTVSAVHPL 261
           +V V   S ++ S+A + +GAD  L    +   + A           +  I+   A   +
Sbjct: 198 QVVVTDLSATRLSKA-KEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASI 256

Query: 262 MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGE 295
              I   +S G LVLVG   +   +P     + E
Sbjct: 257 QAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIRE 290

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  133 bits (336), Expect = 3e-36
 Identities = 64/297 (21%), Positives = 117/297 (39%), Gaps = 46/297 (15%)

Query: 33  RATGEKDVTFKVTHCGICHSDLHMIK-NEWGNTI------YPIVPGHEIVGVVTEVGSKV 85
           R     ++  KV  CGIC SD+HM + +E G  +      +P+  GHE  GVV E G + 
Sbjct: 51  RIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEA 110

Query: 86  ------SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYS 139
                  +F++G+ V    M+  C  C  CA    N+C  +          G    G ++
Sbjct: 111 INRRTNKRFEIGEPVCAEEML-WCGHCRPCAEGFPNHCENLNEL-------GFNVDGAFA 162

Query: 140 DIMVADEHFVVRIPEGT-------PLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGV 189
           + +  D  +   + E            A +   P   A     + +   G  +PG +V +
Sbjct: 163 EYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVA---YNAVIVRGGGIRPGDNVVI 219

Query: 190 VGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM 248
           +G G +G  AV   K  G  KV +   S  +++ A + LGAD  +    ++ ++A +   
Sbjct: 220 LGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KELGADHVIDPTKENFVEAVLDYT 278

Query: 249 DG-----IIDTVSAVHPLMPLIGLLKSQGK-----LVLVGAPEKPLELPAFSLLMGE 295
           +G      ++       + P I  +  + +     + +V   +  + L      +  
Sbjct: 279 NGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRR 335

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  130 bits (330), Expect = 2e-35
 Identities = 67/278 (24%), Positives = 109/278 (39%), Gaps = 29/278 (10%)

Query: 43  KVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102
           +V    +C +D++    +    ++P+V GHE  G+V  VG  V+ FK GDKV +      
Sbjct: 39  QVIATCVCPTDINATDPKK-KALFPVVLGHECAGIVESVGPGVTNFKPGDKV-IPFFAPQ 96

Query: 103 CRSCDSCAIDLENYCPKVIMTYANKYH-----DGT--ITYGG-----------YSDIMVA 144
           C+ C  C   L N C K+              D T   T  G           +S   V 
Sbjct: 97  CKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVV 156

Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAK 204
            E  + R+ +   L+    + C   + Y          PG    V GLG +G  A+   K
Sbjct: 157 SEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCK 216

Query: 205 AMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDE-MQAAM-----GTMDGIIDTVSA 257
             G  ++  I  +  K  +A + LGA   L  R+ D+ +Q  +     G +D  +D    
Sbjct: 217 IAGASRIIAIDINGEKFPKA-KALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGT 275

Query: 258 VHPLMP-LIGLLKSQGKLVLVGAPEKPLELPAFSLLMG 294
              L   +   +   G   +VGA    + +P   +++G
Sbjct: 276 AQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILG 313

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  128 bits (325), Expect = 4e-35
 Identities = 59/251 (23%), Positives = 102/251 (40%), Gaps = 17/251 (6%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           G K+V  ++    + H D+ + K      +  P V G +  GVV  VG  V  F  GD+V
Sbjct: 26  GPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEV 85

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
            V     SC  C+ C    +N CP+  +        G   +G Y++ +V  E  +   P+
Sbjct: 86  -VINPGLSCGRCERCLAGEDNLCPRYQIL-------GEHRHGTYAEYVVLPEANLAPKPK 137

Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVI 213
               +  A +    +T +  +      +PG  V V+    G+   A++ AK  G +V   
Sbjct: 138 NLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIAT 197

Query: 214 STSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLIGLL 268
           + S  K     + LGAD  +     D  +       G     ++D   A++    +I   
Sbjct: 198 AGSEDKL-RRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTGALY-FEGVIKAT 255

Query: 269 KSQGKLVLVGA 279
            + G++ + GA
Sbjct: 256 ANGGRIAIAGA 266

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  129 bits (326), Expect = 7e-35
 Identities = 69/279 (24%), Positives = 110/279 (39%), Gaps = 26/279 (9%)

Query: 40  VTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99
           V  K+    +CH+D + +        +P++ GH   G+V  VG  V+K K GD V +   
Sbjct: 34  VRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKAGDTV-IPLY 92

Query: 100 VGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGT--ITYGG-----------YSDIMVAD 145
           +  C  C  C     N C K+ +T       DGT   T  G           +S+  V  
Sbjct: 93  IPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVA 152

Query: 146 EHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA 205
           +  V +I    PLD    L C   T Y         +PG    V GLGG+G   +   K 
Sbjct: 153 DISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKV 212

Query: 206 MGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE-MQAAM-----GTMDGIIDTVSAV 258
            G  ++  +  +  K + A +  GA   +  +D  + +Q  +     G +D   + +  V
Sbjct: 213 AGASRIIGVDINKDKFARA-KEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNV 271

Query: 259 HPLMPLIGLL-KSQGKLVLVG--APEKPLELPAFSLLMG 294
             +   +    K  G  V+VG  A  + +    F L+ G
Sbjct: 272 KVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTG 310

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  128 bits (325), Expect = 1e-34
 Identities = 65/283 (22%), Positives = 110/283 (38%), Gaps = 27/283 (9%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
              +V  KV   G+CH+DL +   ++     P V GHE  G++  +G  V++ +VGD   
Sbjct: 30  QGDEVLVKVVATGMCHTDLIVRDQKY-PVPLPAVLGHEGSGIIEAIGPNVTELQVGDH-- 86

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIM----------TYANKYHDGTITYGGY------S 139
           V    G C  C  C      YC +              +A   HD  +    +      +
Sbjct: 87  VVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFA 146

Query: 140 DIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVA 199
              ++ E+  V++ +  P++   PL C   T            P       G G +G  A
Sbjct: 147 TYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSA 206

Query: 200 VKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM----GTMDGIIDT 254
           +  AK  G   +  +    S+   A + LGA   + S+ QD + A      G ++  +++
Sbjct: 207 LLAAKVCGASIIIAVDIVESRLELAKQ-LGATHVINSKTQDPVAAIKEITDGGVNFALES 265

Query: 255 VSAVHPLMPLIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGE 295
             +   L   +  L   GK+ +VGAP      +     LL+G 
Sbjct: 266 TGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGG 308

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  127 bits (322), Expect = 2e-34
 Identities = 47/272 (17%), Positives = 87/272 (31%), Gaps = 20/272 (7%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTI---YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
              +   +    G+C +D  +I    G        +V GHE VGVV +     ++ + GD
Sbjct: 24  ESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVVVDPN--DTELEEGD 81

Query: 93  KVGVGCMVG-SCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVR 151
            V        +  + +    D  +  P  +             +G  S+   + E ++VR
Sbjct: 82  IVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVG----AHGYMSEFFTSPEKYLVR 137

Query: 152 IPEGTPLDATA--PLLCAGITVY-SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG- 207
           IP           P+      +  +       D       V+G G LG + +   K    
Sbjct: 138 IPRSQAELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK 197

Query: 208 --VKVTVISTS--PSKKSEAIERLGADSFLVSRD-QDEMQAAMGTMDGIIDTVSAVHPLM 262
               +  +     P    + IE L A      +   +++      MD I +        +
Sbjct: 198 GYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQMDFIYEATGFPKHAI 257

Query: 263 PLIGLLKSQGKLVLVG-APEKPLELPAFSLLM 293
             +  L   G   L+G   +   E+ A +   
Sbjct: 258 QSVQALAPNGVGALLGVPSDWAFEVDAGAFHR 289

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  128 bits (323), Expect = 2e-34
 Identities = 70/282 (24%), Positives = 110/282 (39%), Gaps = 25/282 (8%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
              ++  K+   G+CH+DL+ +        +P+V GHE  G+V  VG  V++F+ G+KV 
Sbjct: 32  HANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKV- 90

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGT--ITYGG-----------YSDI 141
           +   +  C  C  C     N C K     +           T  G           +S  
Sbjct: 91  IPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQY 150

Query: 142 MVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 201
            V ++  V +I    PLD    L C   T +         +PG    V GLG +G  AV 
Sbjct: 151 TVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVM 210

Query: 202 FAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE-MQAAM-----GTMDGIIDT 254
              + G  ++  +  +P K  +A +  GA  F+   D  E +   +     G +D  ++ 
Sbjct: 211 GCHSAGAKRIIAVDLNPDKFEKA-KVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLEC 269

Query: 255 VSAVHPLMP-LIGLLKSQGKLVLVG-APEKPLELPAFSLLMG 294
           V  V  +   L   LK  G  VLVG      +      L+ G
Sbjct: 270 VGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAG 311

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  126 bits (319), Expect = 7e-34
 Identities = 68/283 (24%), Positives = 113/283 (39%), Gaps = 27/283 (9%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
              +V  K+   GIC SD H++      T  P++ GHE  G+V  +G  V+  + GDKV 
Sbjct: 32  KAHEVRIKMVATGICRSDDHVVSGTLV-TPLPVIAGHEAAGIVESIGEGVTTVRPGDKV- 89

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY-HDGT--ITYGG-----------YSDI 141
           +      C  C  C     N+C K  ++       DGT   T  G           +S  
Sbjct: 90  IPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQY 149

Query: 142 MVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 201
            V DE  V +I   +PL+    + C   T Y           G    V GLGG+G   + 
Sbjct: 150 TVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIM 209

Query: 202 FAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM------GTMDGIIDT 254
             KA G  ++  +  +  K ++A + +GA   +  +D  +    +      G +D   + 
Sbjct: 210 GCKAAGAARIIGVDINKDKFAKA-KEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEV 268

Query: 255 VSAVHPLMPLIGLL-KSQGKLVLVG--APEKPLELPAFSLLMG 294
           +  +  ++  +    ++ G  V+VG     + L +    LL G
Sbjct: 269 IGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSG 311

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  121 bits (306), Expect = 4e-32
 Identities = 57/276 (20%), Positives = 100/276 (36%), Gaps = 30/276 (10%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKN-EWGNTI--YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
            E +VT  V   GIC SD+H  K+   G  I     V GHE  G V  V   V   KVGD
Sbjct: 39  KEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGD 98

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
           +V +   V  C +C+ C     N C +V               G     +     +  +I
Sbjct: 99  RVAIEPQV-ICNACEPCLTGRYNGCERVDFLSTPPVP------GLLRRYVNHPAVWCHKI 151

Query: 153 PEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV- 208
                 +  A   PL    + +    R     + G  V + G G +G + +  AKA G  
Sbjct: 152 GN-MSYENGAMLEPL---SVALAGLQRAG--VRLGDPVLICGAGPIGLITMLCAKAAGAC 205

Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRD----QDEMQAAMGTMDG-----IIDTVSAVH 259
            + +      +   A + +  +      +    ++  +  + +  G      ++      
Sbjct: 206 PLVITDIDEGRLKFA-KEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVES 264

Query: 260 PLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGE 295
            +   I  +K  GK+ ++G  +  +++P     + E
Sbjct: 265 SIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVRE 300

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  121 bits (305), Expect = 6e-32
 Identities = 77/279 (27%), Positives = 117/279 (41%), Gaps = 28/279 (10%)

Query: 40  VTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99
           V  K+   GIC SD  ++K     + +P++ GHE VGVV  +G+ V+  K GDKV +   
Sbjct: 37  VRIKILASGICGSDSSVLKEI-IPSKFPVILGHEAVGVVESIGAGVTCVKPGDKV-IPLF 94

Query: 100 VGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGT--ITYGG-----------YSDIMVAD 145
           V  C SC +C     N+C K  M        D T   T  G           +++  V  
Sbjct: 95  VPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVA 154

Query: 146 EHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA 205
           +  V +I    PL++   + C   T Y          PG    V GLGG+G  A+   KA
Sbjct: 155 DIAVAKIDPKAPLES-CLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKA 213

Query: 206 MG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDE-MQAAM-----GTMDGIIDTVSAV 258
            G  ++  + T   K  +A   LGA   L  +D D+ +   +     G +D  ++    +
Sbjct: 214 AGASRIIGVGTHKDKFPKA-IELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRI 272

Query: 259 HPL-MPLIGLLKSQGKLVLVG--APEKPLELPAFSLLMG 294
             +   L       G  V++G  +P + L L    LL G
Sbjct: 273 ETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTG 311

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  119 bits (301), Expect = 2e-31
 Identities = 60/265 (22%), Positives = 106/265 (40%), Gaps = 20/265 (7%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           GE D+  +     + + D  +++   G  + +P VP  ++ GVV  VG  V++F+ GD+V
Sbjct: 52  GEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVTRFRPGDRV 111

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
            +                       +          G    G  S+ +V  E + V  P+
Sbjct: 112 -ISTFAPGWLDGLRPGTGRTPAYETL----------GGAHPGVLSEYVVLPEGWFVAAPK 160

Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIS 214
                  + L CAG+T +  L   G  + G  V V G GG+    ++ AKA G +V V S
Sbjct: 161 SLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTS 220

Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLIGLLK 269
           +S  +K +    LGAD  +   ++D ++             I++       L   +  + 
Sbjct: 221 SSR-EKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAG-LGQSLKAVA 278

Query: 270 SQGKLVLVGAPEKPL-ELPAFSLLM 293
             G++ ++G  E      P   LL+
Sbjct: 279 PDGRISVIGVLEGFEVSGPVGPLLL 303

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  115 bits (289), Expect = 3e-29
 Identities = 45/252 (17%), Positives = 75/252 (29%), Gaps = 30/252 (11%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIY------------------PIVPGHEIVGV 77
              +V   V    I ++ +     E   T +                    V G +  GV
Sbjct: 61  APDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHDQPYHVLGSDCSGV 120

Query: 78  VTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGG 137
           V   G  V ++K GD V V          +           +               +GG
Sbjct: 121 VVRTGIGVRRWKPGDHVIVHPA--HVDEQEPATHGDGMLGTEQRAWG------FETNFGG 172

Query: 138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPL--RFYGLDKPGMHVGVVGL-GG 194
            ++  V     ++  P     +  A       T Y  L        K G  V + G  GG
Sbjct: 173 LAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGG 232

Query: 195 LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDT 254
           LG  A++F K  G     + +S  K+  A+  LG D  +   +             +++T
Sbjct: 233 LGSYAIQFVKNGGGIPVAVVSSAQKE-AAVRALGCDLVINRAELGITDDIADDPRRVVET 291

Query: 255 VSAVHPLMPLIG 266
              +  L+    
Sbjct: 292 GRKLAKLVVEKA 303

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  110 bits (278), Expect = 1e-28
 Identities = 46/238 (19%), Positives = 79/238 (33%), Gaps = 41/238 (17%)

Query: 53  DLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAID 112
           D   IK    N     VPG +  GV+ +VG+KV    +G +V                  
Sbjct: 45  DWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSKMLGRRV------------------ 86

Query: 113 LENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVY 172
                          YH     +G +++  V +   V+ +P+    +  A L C  +T +
Sbjct: 87  -----------A---YHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAW 132

Query: 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF 232
                  L      V +VG G + ++  +     G    V   S S       + G    
Sbjct: 133 QAFEKIPL-TKQREVLIVGFGAVNNLLTQMLNNAG--YVVDLVSASLSQALAAKRGVRHL 189

Query: 233 LVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFS 290
                Q   +        I D V++ +    L+  LK+ G ++ +         PAF+
Sbjct: 190 YREPSQVTQK-----YFAIFDAVNSQN-AAALVPSLKANGHIICIQDRIPAPIDPAFT 241

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  107 bits (269), Expect = 3e-27
 Identities = 53/223 (23%), Positives = 86/223 (38%), Gaps = 36/223 (16%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P   G++  G V E+GS V+   +GDKV                           M  A 
Sbjct: 68  PSGLGYDFSGEVIELGSDVNNVNIGDKV---------------------------MGIAG 100

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
                      Y++ + A    +++  E       A L  AG+T    L    + K G  
Sbjct: 101 FPDHP----CCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQALNQAEV-KQGDV 155

Query: 187 VGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
           V +    GG+GH+A++ AK  G   TVI+T+  +    ++ LGA+  +   ++D + A  
Sbjct: 156 VLIHAGAGGVGHLAIQLAKQKG--TTVITTASKRNHAFLKALGAEQCINYHEEDFLLAIS 213

Query: 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA 288
             +D +ID V      +  I  LK  G +V V        +  
Sbjct: 214 TPVDAVIDLVGG-DVGIQSIDCLKETGCIVSVPTITAGRVIEV 255

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  107 bits (270), Expect = 1e-26
 Identities = 45/225 (20%), Positives = 82/225 (36%), Gaps = 30/225 (13%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIY------------------PIVPGHEIVGV 77
           G  +    V    + ++ +H    E  +T                      V G ++ GV
Sbjct: 69  GPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVIGSDLAGV 128

Query: 78  VTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGG 137
           V   G  V+ ++ GD+V           C S  ++  +     ++    +       +GG
Sbjct: 129 VLRTGPGVNAWQAGDEV--------VAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGG 180

Query: 138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPL--RFYGLDKPGMHVGVVGL-GG 194
            ++I +   + ++  P+    +  A       T Y  L  R     K G +V + G  GG
Sbjct: 181 LAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGG 240

Query: 195 LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD 239
           LG  A +FA A G     + +SP K  E    +GA++ +    + 
Sbjct: 241 LGSYATQFALAGGANPICVVSSPQKA-EICRAMGAEAIIDRNAEG 284

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  105 bits (264), Expect = 3e-26
 Identities = 56/269 (20%), Positives = 93/269 (34%), Gaps = 46/269 (17%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
              DV  K+    I  SD++MI+  +G     P V G+E V  V  VGS V+  K GD V
Sbjct: 53  RGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWV 112

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
            +    G                                  G +    V  E  ++++P 
Sbjct: 113 -IPANAG---------------------------------LGTWRTEAVFSEEALIQVPS 138

Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI 213
             PL + A L     T Y  L  +   +PG  V       G+G   ++ A A+G++   +
Sbjct: 139 DIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINV 198

Query: 214 STSPSKKSEAIER---LGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLI 265
                   +  +R   LGA+  +   +    +      D       ++ V        L+
Sbjct: 199 VRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGG-KSSTELL 257

Query: 266 GLLKSQGKLVLVGAP-EKPLELPAFSLLM 293
             L   G +V  G   ++P+      L+ 
Sbjct: 258 RQLARGGTMVTYGGMAKQPVVASVSLLIF 286

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score =  101 bits (255), Expect = 5e-25
 Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 55/240 (22%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P V G + +GVV  VG++V+ F  GD V                                
Sbjct: 60  PRVLGFDAIGVVESVGNEVTMFNQGDIV-------------------------------- 87

Query: 127 KYHDGTITYGG-YSDIMVADEHFVVRIPEGTPLD----ATAPLLCAGITVY------SPL 175
            Y+ G+    G  ++  + +E  V + P+   +      + PL   GIT Y        +
Sbjct: 88  -YYSGSPDQNGSNAEYQLINERLVAKAPKN--ISAEQAVSLPL--TGITAYETLFDVFGI 142

Query: 176 RFYGLDKPGMHVGVV-GLGGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSFL 233
                +  G  + ++ G GG+G +A + AKA G  + VI+T S ++  E  +++GAD  L
Sbjct: 143 SRNRNENEGKTLLIINGAGGVGSIATQIAKAYG--LRVITTASRNETIEWTKKMGADIVL 200

Query: 234 VSRDQDEMQ---AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFS 290
             ++    Q     +  +D +  T +       +I L+K +G +  + A E   +L A  
Sbjct: 201 NHKESLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFENDQDLNALK 260

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  101 bits (254), Expect = 6e-25
 Identities = 48/220 (21%), Positives = 74/220 (33%), Gaps = 41/220 (18%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P + G ++ G V  VG +V  F+VGD V                                
Sbjct: 64  PAILGMDLAGTVVAVGPEVDSFRVGDAV--------------FG-------------LTG 96

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLD--ATAPLLCAGITVYSPLRFYGLDKPG 184
                    G ++     D   +   P    +   +  PL    IT +  L      + G
Sbjct: 97  GVGGLQ---GTHAQFAAVDARLLASKPAALTMRQASVLPL--VFITAWEGLVDRAQVQDG 151

Query: 185 MHVGV-VGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA 243
             V +  G GG+GHVA++ A A G    V +T+     E +  LGA     SR+ ++  A
Sbjct: 152 QTVLIQGGGGGVGHVAIQIALARG--ARVFATARGSDLEYVRDLGATPIDASREPEDYAA 209

Query: 244 AM---GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280
                   D + DT+     L      +K  G +V     
Sbjct: 210 EHTAGQGFDLVYDTLGGPV-LDASFSAVKRFGHVVSCLGW 248

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  101 bits (254), Expect = 8e-25
 Identities = 53/283 (18%), Positives = 93/283 (32%), Gaps = 47/283 (16%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  D   +      C SD+H +        + ++ GHE VG V EVGS+V  FK GD+V 
Sbjct: 23  GPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVV 82

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSD-------IMVADEHF 148
           V  +                +   +          G                +  AD   
Sbjct: 83  VPAIT-PDWRTSEVQRGYHQHSGGM--------LAGWKFSNVKDGVFGEFFHVNDAD-MN 132

Query: 149 VVRIPEGTPLDATAPL-----------LCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGH 197
           +  +P+  PL+A   +             A I            K G  V V+G+G +G 
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTGFHGAELANI------------KLGDTVCVIGIGPVGL 180

Query: 198 VAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI----- 251
           ++V  A  +G  ++  + +       A    GA   +  ++ D ++  +   DG      
Sbjct: 181 MSVAGANHLGAGRIFAVGSRKHCCDIA-LEYGATDIINYKNGDIVEQILKATDGKGVDKV 239

Query: 252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMG 294
           +     VH     + ++K    +  V    +   +       G
Sbjct: 240 VIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWG 282

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 99.8 bits (249), Expect = 5e-24
 Identities = 48/229 (20%), Positives = 74/229 (32%), Gaps = 42/229 (18%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P+  G ++ GVV E G  V  FK GD+V    +                           
Sbjct: 95  PLTLGRDVSGVVMECGLDVKYFKPGDEV-WAAV--------------------------- 126

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYG----LDK 182
                    G  S+ +V   + V   P+       A L    +T +S +   G     + 
Sbjct: 127 ----PPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNC 182

Query: 183 PGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD-- 239
            G  V ++G  GG+G  A++  KA      V +      SE + +LGAD  +  +     
Sbjct: 183 TGKRVLILGASGGVGTFAIQVMKAWD--AHVTAVCSQDASELVRKLGADDVIDYKSGSVE 240

Query: 240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA 288
           E   ++   D I+D V            LK       V      L    
Sbjct: 241 EQLKSLKPFDFILDNVGG-STETWAPDFLKKWSGATYVTLVTPFLLNMD 288

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 96.2 bits (240), Expect = 7e-23
 Identities = 46/294 (15%), Positives = 91/294 (30%), Gaps = 46/294 (15%)

Query: 10  PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPI 68
            K   G A +     L     +  A G   V  KV    I  SD+  IK ++G   +   
Sbjct: 22  TKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGR 81

Query: 69  VPGHEIVGVVTEVGSKV-SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK 127
             G E VG +   G +  +K  VG +V                                 
Sbjct: 82  PAGFEGVGTIVAGGDEPYAKSLVGKRVAFAT----------------------------- 112

Query: 128 YHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHV 187
              G   +G +++  VA+    + + +    +  A ++   +T  +        +     
Sbjct: 113 ---GLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVKQ-EGEKAF 168

Query: 188 GVV--GLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQ 242
            V+  G   L  + +  AK  G +  V      +    ++ +GA   L  +  D    ++
Sbjct: 169 -VMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQI-ALLKDIGAAHVLNEKAPDFEATLR 226

Query: 243 AAMGT--MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVG-APEKPLELPAFSLLM 293
             M        +D V+       +   +  + + ++ G        +     L+
Sbjct: 227 EVMKAEQPRIFLDAVTGPL-ASAIFNAMPKRARWIIYGRLDPDATVIREPGQLI 279

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 95.9 bits (239), Expect = 1e-22
 Identities = 45/269 (16%), Positives = 70/269 (26%), Gaps = 49/269 (18%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
               V  +V    I  SD  M              G +  G V  VGS V+  +VGD+V 
Sbjct: 35  PRDQVYVRVEAVAINPSDTSMRG---QFATPWAFLGTDYAGTVVAVGSDVTHIQVGDRV- 90

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
            G     C                            T   G +S   V       +IP+G
Sbjct: 91  YGAQNEMCP--------------------------RTPDQGAFSQYTVTRGRVWAKIPKG 124

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV-------------GLGGLGHVAVKF 202
              +  A L     T    ++  GL  P                    G      V ++ 
Sbjct: 125 LSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQM 184

Query: 203 AKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ----AAMGTMDGIIDTVSAV 258
            +  G     I+T      +  +  GA+     R  +  Q         +   +D ++ V
Sbjct: 185 LRLSGY--IPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNV 242

Query: 259 HPLMPLIGLLKSQGKLVLVGAPEKPLELP 287
                    +   G   +   P       
Sbjct: 243 ESTTFCFAAIGRAGGHYVSLNPFPEHAAT 271

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 93.4 bits (233), Expect = 7e-22
 Identities = 53/249 (21%), Positives = 93/249 (37%), Gaps = 45/249 (18%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
            + ++  +V  CG+   DL + +    N    P+VPG E  G+V  +G  V  +++GD+V
Sbjct: 29  QDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRV 88

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
                          A                      + Y  +++++     FV +IP+
Sbjct: 89  --------------MAF---------------------VNYNAWAEVVCTPVEFVYKIPD 113

Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVKFAKAMGVKVTVI 213
                  A      +T Y  L      + GM V V    GG+G    +    +     V 
Sbjct: 114 DMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVT-VF 172

Query: 214 STSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGT-MDGIIDTVSAVHPLMPLIGLLK 269
            T+ + K EAI+       L  R+ D   E++      +D ++D +   +     + LLK
Sbjct: 173 GTASTFKHEAIKDSVTH--LFDRNADYVQEVKRISAEGVDIVLDCLCGDN-TGKGLSLLK 229

Query: 270 SQGKLVLVG 278
             G  +L G
Sbjct: 230 PLGTYILYG 238

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 92.8 bits (231), Expect = 1e-21
 Identities = 51/235 (21%), Positives = 87/235 (37%), Gaps = 46/235 (19%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
             V G++  G+V+ VG  V+ F+ GD+V                                
Sbjct: 82  WKVIGYDAAGIVSAVGPDVTLFRPGDEV-------------------------------- 109

Query: 127 KYHDGTITYGG-YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPL-RFYGLDKPG 184
            ++ G+I   G  ++  + DE  V R P+       A L    IT +        ++KP 
Sbjct: 110 -FYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPV 168

Query: 185 MHVG-----VVGLGGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSFLVSRDQ 238
                    V G GG+G +AV+ A+     +TVI+T S  +  E ++ LGA   +     
Sbjct: 169 PGAAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVKSLGAHHVIDHSKP 227

Query: 239 DEMQAA---MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFS 290
              + A   +G    +  T         +  L+  QG+  L+  P    ++  F 
Sbjct: 228 LAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDPS-AFDIMLFK 281

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 92.2 bits (230), Expect = 1e-21
 Identities = 56/271 (20%), Positives = 102/271 (37%), Gaps = 56/271 (20%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI------VPGHEIVGVVTEVGSKVSKFK 89
            +  V  KV  CG+   + ++         Y         PG ++ GV+  VG   S FK
Sbjct: 56  KDHQVLIKVHACGVNPVETYIRSG-----TYSRKPLLPYTPGSDVAGVIEAVGDNASAFK 110

Query: 90  VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149
            GD+V     +                                   GGY++  +A +H V
Sbjct: 111 KGDRVFTSSTIS----------------------------------GGYAEYALAADHTV 136

Query: 150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGV 208
            ++PE       A +     T Y  L      K G  V V G  GG+G  A + A+A G 
Sbjct: 137 YKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYG- 195

Query: 209 KVTVISTSPSK-KSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLM 262
            + ++ T+ ++   + + + GA      R+ + +      +       II+ ++ V+ L 
Sbjct: 196 -LKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVN-LS 253

Query: 263 PLIGLLKSQGKLVLVGAPEKPLELPAFSLLM 293
             + LL   G++++VG+    +E+     + 
Sbjct: 254 KDLSLLSHGGRVIVVGSR-GTIEINPRDTMA 283

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 91.5 bits (228), Expect = 2e-21
 Identities = 47/267 (17%), Positives = 94/267 (35%), Gaps = 49/267 (18%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
            + +V  ++    I  SDL  I   + + I  P +PG+E VG+V  VG+ VS+  +G +V
Sbjct: 31  KDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFVSRELIGKRV 90

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
                           +                        G + + +     FVV IP+
Sbjct: 91  --------------LPL---------------------RGEGTWQEYVKTSADFVVPIPD 115

Query: 155 GTPLDATAPLLCAGITVYSPLR-FYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTV 212
                  A +    +T +        L +    + V      +GH+  + ++ +     +
Sbjct: 116 SIDDFTAAQMYINPLTAWVTCTETLNL-QRNDVLLVNACGSAIGHLFAQLSQILN--FRL 172

Query: 213 IST-SPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLIG 266
           I+    +K +E + RLGA   + +      +  M   +G      ID++        L  
Sbjct: 173 IAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGG-PDGNELAF 231

Query: 267 LLKSQGKLVLVGAPEKPLELPAFSLLM 293
            L+  G  + +G      ++    ++ 
Sbjct: 232 SLRPNGHFLTIGLLSGI-QVNWAEIVT 257

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score = 91.6 bits (228), Expect = 5e-21
 Identities = 61/236 (25%), Positives = 88/236 (37%), Gaps = 30/236 (12%)

Query: 34  ATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
              E  V  KV    IC SD HM++         +V GHEI G V E G  V   ++GD 
Sbjct: 30  KKIEHGVILKVVSTNICGSDQHMVRGR-TTAQVGLVLGHEITGEVIEKGRDVENLQIGDL 88

Query: 94  VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSD-----------IM 142
           V V   V +C  C SC       C  V     N    G     GY D           ++
Sbjct: 89  VSVPFNV-ACGRCRSCKEMHTGVCLTV-----NPARAGGA--YGYVDMGDWTGGQAEYVL 140

Query: 143 V--ADEHFVVRIPEGTPLDATAP--LLCAGI--TVYSPLRFYGLDKPGMHVGVVGLGGLG 196
           V  AD   ++++P+              + I  T Y      G+  PG  V V G G +G
Sbjct: 141 VPYAD-FNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAGV-GPGSTVYVAGAGPVG 198

Query: 197 HVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI 251
             A   A+ +G   V V   +P++ + A +  G +   +S D    +     +   
Sbjct: 199 LAAAASARLLGAAVVIVGDLNPARLAHA-KAQGFEIADLSLDTPLHEQIAALLGEP 253

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 89.7 bits (223), Expect = 1e-20
 Identities = 47/294 (15%), Positives = 92/294 (31%), Gaps = 72/294 (24%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIK----------NEWGNTIYPIVPGHEIVGVVTEVGSKV 85
              +V  K     +  SD++ I+            +G T      G+E +  V +VGS V
Sbjct: 32  APNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNV 91

Query: 86  SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVAD 145
           S  + GD                           VI ++ N        +G +    + +
Sbjct: 92  SSLEAGD--------------------------WVIPSHVN--------FGTWRTHALGN 117

Query: 146 EHFVVRI-----------PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV--GL 192
           +   +++           P G  ++  A +    +T Y  L  Y    PG    +   G 
Sbjct: 118 DDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGT 177

Query: 193 GGLGHVAVKFAKAMGVKV-TVISTSPSK--KSEAIERLGADSFLVSRDQDEMQAAM---- 245
             +G  A +  K +     +VI   P+      +++ LGA   +     +  +       
Sbjct: 178 SAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKE 237

Query: 246 ------GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLL 292
                 G     ++ V        +   L + G ++  G     P+ +P    +
Sbjct: 238 WIKQSGGEAKLALNCVGG-KSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYI 290

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score = 90.0 bits (224), Expect = 2e-20
 Identities = 60/236 (25%), Positives = 92/236 (38%), Gaps = 34/236 (14%)

Query: 43  KVTHCGICHSDLHMIKNEWGNTIYP--IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMV 100
           KV    IC SD H+ +   G  I P   V GHEI G V E GS V    +GD V V   V
Sbjct: 38  KVVSTNICGSDQHIYR---GRFIVPKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNV 94

Query: 101 GSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI---TYGGYSD-----IMV--ADEHFVV 150
            +C  C +C     + C        N   D         G+S      ++V  AD + ++
Sbjct: 95  -ACGRCRNCKEARSDVCEN---NLVNPDADLGAFGFDLKGWSGGQAEYVLVPYAD-YMLL 149

Query: 151 RIPEGTPLDATAP--LLCAGI--TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM 206
           +  +            L + I  T +      G+ KPG HV + G G +G  A   A+ +
Sbjct: 150 KFGDKEQAMEKIKDLTLISDILPTGFHGCVSAGV-KPGSHVYIAGAGPVGRCAAAGARLL 208

Query: 207 GVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM------DGIIDTV 255
           G   V V   +P +        G ++ +  R+   ++  +  +      D  +D V
Sbjct: 209 GAACVIVGDQNPERLKLL-SDAGFET-IDLRNSAPLRDQIDQILGKPEVDCGVDAV 262

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 86.5 bits (215), Expect = 2e-19
 Identities = 60/254 (23%), Positives = 95/254 (37%), Gaps = 53/254 (20%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI------VPGHEIVGVVTEVGSKVSKFK 89
           GE +V  +    G+   D+   +       YP       + G E+ G +  VG  VS + 
Sbjct: 54  GEGEVLVRAEAIGVNRPDIAQRQG-----SYPPPKDASPILGLELSGEIVGVGPGVSGYA 108

Query: 90  VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149
           VGDKV              C +                        G Y++  +     +
Sbjct: 109 VGDKV--------------CGL---------------------ANGGAYAEYCLLPAGQI 133

Query: 150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVKFAKAMGV 208
           +  P+G      A L     TV++ L        G  V +  G  G+G  A++ A+A G 
Sbjct: 134 LPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA 193

Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGT-MDGIIDTVSAVHPLMPL 264
           +V   + S  K  EA ERLGA   +  R +D    ++A  G  +D I+D + A +     
Sbjct: 194 EVYATAGSTGKC-EACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAAY-FERN 251

Query: 265 IGLLKSQGKLVLVG 278
           I  L   G L ++ 
Sbjct: 252 IASLAKDGCLSIIA 265

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 85.0 bits (211), Expect = 5e-19
 Identities = 50/209 (23%), Positives = 73/209 (34%), Gaps = 49/209 (23%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI------VPGHEIVGVVTEVGSKVSKFK 89
           G   V   V   G+C  D  M K E     Y +      VPG E  GVV     + S  K
Sbjct: 47  GPNVVVVDVKAAGVCFPDYLMTKGE-----YQLKMEPPFVPGIETAGVVRSAP-EGSGIK 100

Query: 90  VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149
            GD+V               A                         GGY++ +      +
Sbjct: 101 PGDRV--------------MAF---------------------NFIGGYAERVAVAPSNI 125

Query: 150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGV 208
           +  P          L+    T+Y      G  + G  V V+G  GG+G  A++ AK MG 
Sbjct: 126 LPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA 185

Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRD 237
           KV  +    +  +E ++ +GAD  L   +
Sbjct: 186 KVIAVVNRTA-ATEFVKSVGADIVLPLEE 213

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 82.3 bits (204), Expect = 4e-18
 Identities = 47/206 (22%), Positives = 75/206 (36%), Gaps = 38/206 (18%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
            E ++  +    GI   D ++    +     P   G E  G+V++VGS V   K GD+V 
Sbjct: 27  AENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVV 86

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
                                       YA          G YS +          +P  
Sbjct: 87  ----------------------------YA------QSALGAYSSVHNIIADKAAILPAA 112

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS 214
              +  A     G+TVY  LR     KP          GG+G +A ++AKA+G    +I 
Sbjct: 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALG--AKLIG 170

Query: 215 TSPSK-KSEAIERLGADSFLVSRDQD 239
           T  +  K+++  + GA   +  R++D
Sbjct: 171 TVGTAQKAQSALKAGAWQVINYREED 196

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 81.4 bits (202), Expect = 6e-18
 Identities = 59/267 (22%), Positives = 98/267 (36%), Gaps = 65/267 (24%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI------VPGHEIVGVVTEVGSKVSKFK 89
            E +V  +V   G+  +D  M         Y        +PG E+VGVV           
Sbjct: 24  EEGEVVLRVEAVGLNFADHLMRLGA-----YLTRLHPPFIPGMEVVGVV----------- 67

Query: 90  VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149
            G +                A+                     +  GG ++ +   +  +
Sbjct: 68  EGRRY--------------AAL---------------------VPQGGLAERVAVPKGAL 92

Query: 150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGV 208
           + +PEG   +  A    + +T Y  L+     +PG  V V    G LG  AV+ A+AMG+
Sbjct: 93  LPLPEGLSPEEAAAFPVSFLTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAMGL 151

Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLL 268
           +V   ++ P K       LGA+      +  E   A G +D +++       +   +GLL
Sbjct: 152 RVLAAASRPEKL-ALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKE--VEESLGLL 208

Query: 269 KSQGKLVLVGAP--EKPLELPAFSLLM 293
              G+LV +GA   E    +P   L+ 
Sbjct: 209 AHGGRLVYIGAAEGEVA-PIPPLRLMR 234

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 81.1 bits (201), Expect = 1e-17
 Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 38/206 (18%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G + V  +    G+   D +     +     P   G E  GVV  VG +V++FKVGD+V 
Sbjct: 27  GPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFKVGDRVA 86

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
                                       Y       T   G YS++ V  E  +V++ + 
Sbjct: 87  ----------------------------YG------TGPLGAYSEVHVLPEANLVKLADS 112

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVKFAKAMGVKVTVIS 214
              +  A L+  G+TV   LR     KPG  +      GG+G +A ++AKA+G    +I 
Sbjct: 113 VSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALG--AKLIG 170

Query: 215 TSPSK-KSEAIERLGADSFLVSRDQD 239
           T  S  K+   + LGA   +    +D
Sbjct: 171 TVSSPEKAAHAKALGAWETIDYSHED 196

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 80.4 bits (199), Expect = 2e-17
 Identities = 54/211 (25%), Positives = 81/211 (38%), Gaps = 43/211 (20%)

Query: 36  GEKDVTFKVTHCGICHSDLHM---IKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G   V  + T  G+   D +    I +       PIV G E   VV EVG  V+ F VG+
Sbjct: 27  GPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTVGE 86

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
           +V                      C                  G YS   +     ++++
Sbjct: 87  RVC--------------------TC--------------LPPLGAYSQERLYPAEKLIKV 112

Query: 153 PEGTPLD--ATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVKFAKAMGVK 209
           P+   LD    A L+  G+T    L      KPG +V +    GG+GH+ V +A+ +G  
Sbjct: 113 PKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLG-- 170

Query: 210 VTVISTSPSK-KSEAIERLGADSFLVSRDQD 239
            TVI T  ++ K+E   +LG    +    QD
Sbjct: 171 ATVIGTVSTEEKAETARKLGCHHTINYSTQD 201

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 77.7 bits (192), Expect = 2e-16
 Identities = 60/272 (22%), Positives = 100/272 (36%), Gaps = 56/272 (20%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI------VPGHEIVGVVTEVGSKV-SKF 88
           GE +V  KV    +  +DL   + +     Y        + G E  G V E+G      +
Sbjct: 48  GEGEVLLKVAASALNRADLMQRQGQ-----YDPPPGASNILGLEASGHVAELGPGCQGHW 102

Query: 89  KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF 148
           K+GD                 A+                     +  GG +  +   E  
Sbjct: 103 KIGDTA--------------MAL---------------------LPGGGQAQYVTVPEGL 127

Query: 149 VVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVKFAKAMG 207
           ++ IPEG  L   A +  A +T +  L   G  + G +V +  GL G+G  A++  +  G
Sbjct: 128 LMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAG 187

Query: 208 VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLM 262
               V + S  K  +  E+LGA +    + +D  +A +    G     I+D +   +   
Sbjct: 188 AIPLVTAGSQKKL-QMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSY-WE 245

Query: 263 PLIGLLKSQGKLVLVGAPE-KPLELPAFSLLM 293
             +  L   G+ VL G      +  P FS L+
Sbjct: 246 KNVNCLALDGRWVLYGLMGGGDINGPLFSKLL 277

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 76.9 bits (189), Expect = 4e-16
 Identities = 26/174 (14%), Positives = 46/174 (26%), Gaps = 38/174 (21%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
            +  G+E  GVV E GS  +   +  K  V  + G                         
Sbjct: 91  SMPVGNEGAGVVVEAGSSPAAQALMGKT-VAAIGG------------------------- 124

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
                      YS          + +PEG      A      +T    +    L +    
Sbjct: 125 ---------AMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMVETMRL-EGHSA 174

Query: 187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD 239
           +        LG +  +     G+K+  I     +  + ++  GA     +    
Sbjct: 175 LVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQA-DLLKAQGAVHVCNAASPT 227

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 75.8 bits (187), Expect = 9e-16
 Identities = 43/240 (17%), Positives = 79/240 (32%), Gaps = 53/240 (22%)

Query: 67  PIVPGHEIVGVVTEVG-SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
           P   G E +G V  +G S  +++ VG  V                               
Sbjct: 84  PFDIGFEGIGEVVALGLSASARYTVGQAVA------------------------------ 113

Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGM 185
                  +  G +++  V        +P          LL +G T Y  L+  G    G 
Sbjct: 114 ------YMAPGSFAEYTVVPASIATPVPSV--KPEYLTLLVSGTTAYISLKELGGLSEGK 165

Query: 186 HVGVV--GLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---E 240
            V +V    GG G  A++ +K     V    +S  +KS  ++ LG D  +  + +     
Sbjct: 166 KV-LVTAAAGGTGQFAMQLSKKAKCHVIGTCSSD-EKSAFLKSLGCDRPINYKTEPVGTV 223

Query: 241 MQAAMGT-MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA-----PEKPLELPAFSLLMG 294
           ++      +D + ++V         +  L ++G+L+++G          L       L  
Sbjct: 224 LKQEYPEGVDVVYESVGGAM-FDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPA 282

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 71.5 bits (176), Expect = 2e-14
 Identities = 40/178 (22%), Positives = 63/178 (35%), Gaps = 42/178 (23%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P V G E  G V   G  V+ F+VGD+V                             Y  
Sbjct: 64  PYVLGREASGTVVAKGKGVTNFEVGDQVA----------------------------YI- 94

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTP---LDATAPLLCAGITVYSPLRFYGLDKP 183
                  T+  YS I       V+++P+GT    L   A  L   +T  S        K 
Sbjct: 95  ----SNSTFAQYSKISSQGP--VMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKK 148

Query: 184 GMHVGV-VGLGGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGADSFLVSRDQD 239
           G +V +    GG+G +  +  K  G     I+ + +  K +  +  GA+  + +  +D
Sbjct: 149 GDYVLLFAAAGGVGLILNQLLKMKG--AHTIAVASTDEKLKIAKEYGAEYLINASKED 204

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 72.1 bits (177), Expect = 3e-14
 Identities = 49/250 (19%), Positives = 73/250 (29%), Gaps = 62/250 (24%)

Query: 3   QAPEQEHPKNAFGWAAKDTSGVLSPFHF-----SRRATGEKDVTFKVTHCGICHSDLHMI 57
                  P            G L          +    G+ +V   +   G+   D  + 
Sbjct: 199 SDDVLPVPDGTGWRLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIA 258

Query: 58  KNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYC 117
              +         G E  GVV E G  V+    GD+V +G +  +               
Sbjct: 259 LGMYPG---VASLGSEGAGVVVETGPGVTGLAPGDRV-MGMIPKAFGP------------ 302

Query: 118 PKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRF 177
                                  + VAD   V RIP G      A +    +T Y     
Sbjct: 303 -----------------------LAVADHRMVTRIPAGWSFARAASVPIVFLTAY----- 334

Query: 178 YGLD-----KPGMHVGV-VGLGGLGHVAVKFAKAMGVKV--TVISTSPSKKSEAIERLGA 229
           Y L      +PG  + V    GG+G  A++ A+ +G +V  T    S  K       L  
Sbjct: 335 YALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATA---SEDKWQAV--ELSR 389

Query: 230 DSFLVSRDQD 239
           +    SR  D
Sbjct: 390 EHLASSRTCD 399

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 63.1 bits (154), Expect = 2e-11
 Identities = 44/219 (20%), Positives = 77/219 (35%), Gaps = 40/219 (18%)

Query: 66  YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
           +P++PG +  G V    S+  +F  G +V +                             
Sbjct: 57  FPMIPGIDFAGTVHA--SEDPRFHAGQEVLL----------------------------- 85

Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITV---YSPLRFYGLDK 182
             +  G   +GG ++       ++V +P G        +  AG T       L   G+  
Sbjct: 86  TGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRP 145

Query: 183 PGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241
               V V G  GG+G  AV     +G +V  + +        ++ LGA+  ++SRD+   
Sbjct: 146 QDGEVVVTGASGGVGSTAVALLHKLGYQVAAV-SGRESTHGYLKSLGANR-ILSRDEFAE 203

Query: 242 QAAMGTM--DGIIDTVSAVHPLMPLIGLLKSQGKLVLVG 278
              +      G IDTV     L  ++  +   G +   G
Sbjct: 204 SRPLEKQLWAGAIDTVGD-KVLAKVLAQMNYGGCVAACG 241

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 62.7 bits (153), Expect = 2e-11
 Identities = 41/200 (20%), Positives = 65/200 (32%), Gaps = 45/200 (22%)

Query: 66  YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
           YP++ G +  G V    S   +F  GD+V                               
Sbjct: 61  YPLILGIDAAGTVVS--SNDPRFAEGDEVIA----------------------------- 89

Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITV---YSPLRFYGLDK 182
             Y  G    GG S+       ++V +P+   L        AG T       L   GL  
Sbjct: 90  TSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSP 149

Query: 183 PGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241
               V V G  GG+G +AV      G  V    T   + ++ +++LGA   +    ++++
Sbjct: 150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVAS-TGNREAADYLKQLGASEVI---SREDV 205

Query: 242 QAAMG------TMDGIIDTV 255
                         G +D V
Sbjct: 206 YDGTLKALSKQQWQGAVDPV 225

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 58.1 bits (141), Expect = 7e-10
 Identities = 47/200 (23%), Positives = 72/200 (36%), Gaps = 45/200 (22%)

Query: 66  YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
           YP VPG ++ GVV    S+  +F+ GD+V                               
Sbjct: 60  YPFVPGIDLAGVVVS--SQHPRFREGDEVIA----------------------------- 88

Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITV---YSPLRFYGLDK 182
             Y  G   +GGYS+       ++V +P+G  L     +  AG T       L  +GL  
Sbjct: 89  TGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTP 148

Query: 183 PGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241
               V V G  GG+G +AV      G  V    T  + + + +  LGA   L    ++++
Sbjct: 149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEAS-TGKAAEHDYLRVLGAKEVL---AREDV 204

Query: 242 QAAMG------TMDGIIDTV 255
            A              +D V
Sbjct: 205 MAERIRPLDKQRWAAAVDPV 224

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 53.3 bits (128), Expect = 5e-08
 Identities = 34/175 (19%), Positives = 54/175 (30%), Gaps = 39/175 (22%)

Query: 69   VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY 128
            +PG  +            +   G +V                           M      
Sbjct: 1588 IPGKWLTRDCMLGMEFSGRDASGRRV---------------------------M------ 1614

Query: 129  HDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVG 188
              G +   G +  ++  +H    +P    L+  A +     T Y  L   G  +PG  V 
Sbjct: 1615 --GMVPAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVL 1672

Query: 189  V-VGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSFLVSRDQD 239
            +  G GG+G  A+  A + G +V     S  K++    R   L    F  SRD  
Sbjct: 1673 IHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTS 1727

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Length = 293

 Score = 51.9 bits (124), Expect = 7e-08
 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 5/73 (6%)

Query: 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ 242
            G +V V+GLG +G    +   A+G KV V +      +   E +G + F       +  
Sbjct: 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAE-MGMEPF----HISKAA 208

Query: 243 AAMGTMDGIIDTV 255
             +  +D  I+T+
Sbjct: 209 QELRDVDVCINTI 221

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 46.4 bits (111), Expect = 2e-06
 Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 12/110 (10%)

Query: 147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD-----KPGMHVGV-VGLGGLGHVAV 200
             VV IP+    +  A    A +T +     + L       PG  V +    GG+G  AV
Sbjct: 2   DLVVPIPDTLADNEAATFGVAYLTAW-----HSLCEVGRLSPGERVLIHSATGGVGMAAV 56

Query: 201 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
             AK +G ++   + S +K+ E + RLG +    SR  D     +   DG
Sbjct: 57  SIAKMIGARIYTTAGSDAKR-EMLSRLGVEYVGDSRSVDFADEILELTDG 105

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 Length = 364

 Score = 42.5 bits (101), Expect = 9e-05
 Identities = 26/101 (25%), Positives = 37/101 (36%), Gaps = 8/101 (7%)

Query: 138 YSDIM--VADE-HFVVRIPE-----GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV 189
             D M  +  E  +V  I       G P   TA  +  G+   +   F      G+ V V
Sbjct: 119 TVDDMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGSDSLEGLAVSV 178

Query: 190 VGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD 230
            GLG +     K     G K+ V   + +  S A+   GAD
Sbjct: 179 QGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD 219

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 2/79 (2%)

Query: 180 LDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ 238
           L   GM V VVG  G +    +   K  G +   +  +  +  E +   GA   +V+  +
Sbjct: 17  LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE-LRERGASDIVVANLE 75

Query: 239 DEMQAAMGTMDGIIDTVSA 257
           ++   A  ++D ++    +
Sbjct: 76  EDFSHAFASIDAVVFAAGS 94

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} Length = 324

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 10/47 (21%), Positives = 20/47 (42%)

Query: 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD 230
           G  + ++G G +G       K  G+KV  +S S  +++   +     
Sbjct: 140 GRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFDQVYQLP 186

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* Length = 334

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG 228
              + P  F G D  G  +G++GLG +G    K AK   ++  ++  S ++K E    L 
Sbjct: 135 GVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMR--ILYYSRTRKEEVERELN 192

Query: 229 A 229
           A
Sbjct: 193 A 193

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A Length = 315

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 2/50 (4%)

Query: 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-GADSF 232
              VG++G G LG    +  +A G  +   S S  K    +E   G +  
Sbjct: 139 EFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSR-KSWPGVESYVGREEL 187

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Length = 300

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 5/75 (6%)

Query: 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ 242
            G  V V+GLG  G    +   A+G  V V + S +  +   E             DE++
Sbjct: 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHT-----DELK 210

Query: 243 AAMGTMDGIIDTVSA 257
             +  +D  I+T+ +
Sbjct: 211 EHVKDIDICINTIPS 225

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} Length = 324

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 10/49 (20%), Positives = 20/49 (40%)

Query: 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF 232
           G  + + G G +G      A A+G+ V  ++T+        E +   + 
Sbjct: 137 GQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHETVAFTAT 185

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 Length = 153

 Score = 38.9 bits (91), Expect = 5e-04
 Identities = 14/49 (28%), Positives = 19/49 (38%)

Query: 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV 234
           H  V G   L    +      G  VTVIS  P    + +E+   D+  V
Sbjct: 5   HFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADV 53

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 2/74 (2%)

Query: 185 MHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA 243
           M + +VG  G +G   +K       ++   +    +  +    + A  F V    +EM  
Sbjct: 1   MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ-YNNVKAVHFDVDWTPEEMAK 59

Query: 244 AMGTMDGIIDTVSA 257
            +  MD II+   +
Sbjct: 60  QLHGMDAIINVSGS 73

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 7e-04
 Identities = 41/276 (14%), Positives = 75/276 (27%), Gaps = 105/276 (38%)

Query: 110 AIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169
            I  E   P ++     +  D       Y+D  V  ++ V R+                 
Sbjct: 97  PIKTEQRQPSMMTRMYIEQRDRL-----YNDNQVFAKYNVSRLQP--------------- 136

Query: 170 TVYSPLR--FYGLDKPGMHVGVVGLGGLGH--VAVKFAKAMGVK---------VTV---- 212
             Y  LR     L +P  +V + G+ G G   VA+    +  V+         + +    
Sbjct: 137 --YLKLRQALLEL-RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN 193

Query: 213 --------------------------ISTSPSKKSEAIERL--------GADSFLVSRD- 237
                                      S    +       L          +  LV  + 
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV 253

Query: 238 QD-EMQAAMG--------TMD-GIIDTVSA---VHPLM--PLIGLLKSQGKLVLVGA--- 279
           Q+ +   A          T    + D +SA    H  +    + L   + K +L+     
Sbjct: 254 QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC 313

Query: 280 -----PEK-----PLELPAFSLLMGEEEDSW--WQH 303
                P +     P  L   +  + +   +W  W+H
Sbjct: 314 RPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKH 349

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	314
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.94
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.77
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	99.13
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.1
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.92
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.92
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.9
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.78
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.66
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.59
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.46
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.36
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.35
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.28
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.27
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	98.26
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	98.24
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.21
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	98.18
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	98.11
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	98.05
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	98.05
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.02
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.97
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.94
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.91
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.8
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.79
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.78
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.78
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.77
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.77
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.76
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.75
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.75
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.72
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	97.69
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.68
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.68
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.68
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.68
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.67
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.67
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.66
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.65
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.65
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.65
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.64
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.63
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.63
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.63
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.62
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.62
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.62
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.62
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.62
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.61
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.61
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.6
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.6
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.6
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.6
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.58
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.58
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.57
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.57
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.57
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.57
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.57
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.56
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.56
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.56
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.56
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.56
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.56
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.55
1spx_A	278	Short-chain reductase family member (5L265); paral	97.54
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.54
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.53
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.53
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.53
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.51
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.51
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.5
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.5
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.5
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.49
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.49
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.49
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.49
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.48
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.47
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.47
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.46
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.46
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.45
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.45
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.45
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.45
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.45
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.45
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.45
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	97.44
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.44
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.44
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.43
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.43
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.43
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.43
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.43
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.42
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.41
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	97.41
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.4
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.4
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.4
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.39
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.39
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.38
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.38
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.38
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.38
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.38
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.37
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.37
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.37
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	97.37
3l07_A	285	Bifunctional protein fold; structural genomics, ID	97.36
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.36
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	97.36
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.35
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.35
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.35
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.35
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.34
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.34
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.34
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	97.33
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.32
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	97.31
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.31
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.31
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.31
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.31
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.3
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.3
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.3
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	97.29
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.29
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.29
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.28
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	97.28
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.27
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.27
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.27
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.26
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.26
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.26
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.25
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	97.25
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.25
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	97.24
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.24
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	97.24
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.23
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.23
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	97.23
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.23
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.23
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	97.23
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	97.22
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.22
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.22
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.22
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.21
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.21
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.21
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.21
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.19
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.19
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	97.18
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.18
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	97.18
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.17
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.17
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.17
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.17
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.17
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	97.17
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.16
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.16
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.16
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.15
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.15
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.14
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.13
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	97.13
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	97.12
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.12
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.11
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	97.11
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.1
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.1
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	97.1
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.09
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.09
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.09
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	97.09
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.08
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.08
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	97.08
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.08
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.08
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.07
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.06
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.06
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	97.06
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.06
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	97.06
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	97.06
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.06
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.05
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.05
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	97.04
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	97.04
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.04
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.04
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	97.04
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	97.03
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.02
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	97.02
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.01
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	97.01
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.0
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.99
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.99
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.99
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.98
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.98
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.98
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.98
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.97
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.97
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.97
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.96
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.96
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	96.96
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.95
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.95
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	96.94
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.93
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	96.92
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	96.92
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.92
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.91
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	96.91
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.9
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.9
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.9
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.9
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	96.9
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.89
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	96.89
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.89
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.88
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	96.88
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.88
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.87
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	96.86
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	96.85
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	96.84
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.84
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.84
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.83
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	96.83
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	96.83
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	96.83
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.83
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.82
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.81
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	96.8
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.79
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	96.78
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.78
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.76
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.76
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	96.75
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	96.75
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.73
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.73
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.73
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	96.72
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.71
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	96.71
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	96.69
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.68
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	96.67
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.66
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.66
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.65
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	96.65
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	96.65
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.64
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	96.64
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	96.62
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	96.62
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	96.62
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	96.61
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	96.61
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.6
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.6
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.6
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	96.59
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	96.59
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	96.59
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	96.58
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	96.57
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.56
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.56
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	96.55
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	96.55
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	96.54
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.54
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.53
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	96.53
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	96.52
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	96.51
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	96.5
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	96.5
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	96.49
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	96.49
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.48
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	96.47
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	96.47
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	96.47
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.46
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.45
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.44
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.44
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.43
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.43
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.42
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	96.41
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	96.4
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.39
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	96.38
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	96.36
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.36
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	96.36
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.35
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	96.34
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.33
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.32
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	96.32
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.32
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.31
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	96.31
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.3
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	96.29
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	96.27
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	96.27
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	96.25
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	96.25
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	96.24
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.22
3f4k_A	257	Putative methyltransferase; structural genomics, P	96.22
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	96.2
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	96.2
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.19
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.17
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	96.15
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.15
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	96.14
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.14
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.14
2a9f_A	398	Putative malic enzyme ((S)-malate:NAD+ oxidoreduct	96.13
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	96.12
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	96.09
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	96.09
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.08
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.08
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	96.07
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	96.06
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.06
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.05
2i99_A	312	MU-crystallin homolog; thyroid hormine binding pro	96.03
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	96.03
1np3_A	338	Ketol-acid reductoisomerase; A DEEP figure-OF-eigh	96.03
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.01
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	96.0
1yqg_A	263	Pyrroline-5-carboxylate reductase; structural geno	95.99
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.99
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	95.98
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	95.95
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	95.95
1dxy_A	333	D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc	95.94
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	95.94
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	95.93
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	95.93
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	95.92
2iz1_A	474	6-phosphogluconate dehydrogenase, decarboxylating;	95.88
1pgj_A	478	6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o	95.88
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.88
4e4y_A	244	Short chain dehydrogenase family protein; structur	95.87
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	95.87
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	95.84
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	95.84
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	95.83
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	95.83
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	95.81
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	95.81
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	95.8
1u8f_O	335	GAPDH, glyceraldehyde-3-phosphate dehydrogenase, l	95.8
2i7c_A	283	Spermidine synthase; transferase, structural genom	95.79
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	95.79
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	95.79
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	95.77
1inl_A	296	Spermidine synthase; beta-barrel, rossman fold, st	95.75
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	95.75
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.75
1pjq_A	457	CYSG, siroheme synthase; rossman fold, nucleotide	95.75
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	95.74
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.74
1xdw_A	331	NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas	95.72
2kw5_A	202	SLR1183 protein; structural genomics, northeast st	95.71
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	95.69
2o07_A	304	Spermidine synthase; structural genomics, structur	95.69
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	95.69
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	95.68

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=2e-52  Score=385.52  Aligned_cols=292  Identities=75%  Similarity=1.276  Sum_probs=260.2

Q ss_pred             cccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCC
Q 021300            8 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSK   87 (314)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   87 (314)
                      ..+||++++..++.++.+++.+++.|+|++|||||||.++|||++|++++.|.++...+|.++|||++|+|+++|+++++
T Consensus        12 ~~~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~   91 (366)
T 1yqd_A           12 EHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKK   91 (366)
T ss_dssp             HSSEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSCCCSSBCCCCCEEEEEEEECTTCCS
T ss_pred             hCCeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCCCCCCEecccceEEEEEEECCCCCc
Confidence            34788888888777888999999999999999999999999999999999887665578999999999999999999999


Q ss_pred             CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (314)
Q Consensus        88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~  167 (314)
                      |++||||++.+...+|+.|.+|++|.+|+|.+..+.+.+....+....|+|+||+++++..++++|+++++++|++++++
T Consensus        92 ~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~  171 (366)
T 1yqd_A           92 VNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCA  171 (366)
T ss_dssp             CCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTH
T ss_pred             CCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhh
Confidence            99999998777777999999999999999976655444333334456799999999999999999999999999999999


Q ss_pred             hhhhhhhhHhcCCCC-CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcC
Q 021300          168 GITVYSPLRFYGLDK-PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG  246 (314)
Q Consensus       168 ~~ta~~~l~~~~~~~-~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~  246 (314)
                      +.|||+++.+.. ++ +|++|||+|+|++|++++|+|+.+|++|+++++++++++.+.+++|++.++++.+.+.+.++.+
T Consensus       172 ~~ta~~al~~~~-~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~  250 (366)
T 1yqd_A          172 GITVYSPLKYFG-LDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAG  250 (366)
T ss_dssp             HHHHHHHHHHTT-CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTT
T ss_pred             HHHHHHHHHhcC-cCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhC
Confidence            999999998765 67 9999999999999999999999999999999999988877766999999999988887877778


Q ss_pred             CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          247 TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       247 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                      ++|++||++|....+..++++|+++|+++.+|...++..++...++.+++++.+
T Consensus       251 ~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g  304 (366)
T 1yqd_A          251 TLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAG  304 (366)
T ss_dssp             CEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCEEEE
T ss_pred             CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcEEEE
Confidence            999999999987668999999999999999998777677888888889998874

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=1e-52  Score=386.32  Aligned_cols=291  Identities=51%  Similarity=0.956  Sum_probs=254.4

Q ss_pred             cccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCC
Q 021300            8 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSK   87 (314)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   87 (314)
                      ..+|++.++..++.++.++++++|.|+|++|||||||.++|||++|++.+.|.++...+|.++|||++|+|+++|+++++
T Consensus         5 ~~~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~~   84 (357)
T 2cf5_A            5 EAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSK   84 (357)
T ss_dssp             -CCCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTCCCSSBCCCCEEEEEEEEECSSCCS
T ss_pred             cCcceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCCCCCCeecCcceeEEEEEECCCCCC
Confidence            34577777777677788999999999999999999999999999999999887665578999999999999999999999


Q ss_pred             CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (314)
Q Consensus        88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~  167 (314)
                      |++||||++.+...+|++|.+|.+|.+|+|++..+.+.+....+....|+|+||++++++.++++|+++++++|++++++
T Consensus        85 ~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~  164 (357)
T 2cf5_A           85 FTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCA  164 (357)
T ss_dssp             CCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGTH
T ss_pred             CCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhhhhhh
Confidence            99999998877777999999999999999977655444333334456799999999999999999999999999999999


Q ss_pred             hhhhhhhhHhcCCCC-CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcC
Q 021300          168 GITVYSPLRFYGLDK-PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG  246 (314)
Q Consensus       168 ~~ta~~~l~~~~~~~-~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~  246 (314)
                      +.|||+++.+.. ++ +|++|||+|+|++|++++|+|+.+|++|+++++++++++.+.+++|++.++++.+.+.+.+..+
T Consensus       165 ~~ta~~~l~~~~-~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~  243 (357)
T 2cf5_A          165 GVTVYSPLSHFG-LKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELAD  243 (357)
T ss_dssp             HHHHHHHHHHTS-TTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTT
T ss_pred             HHHHHHHHHhcC-CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcC
Confidence            999999998765 67 9999999999999999999999999999999999887766655899999999988877777778


Q ss_pred             CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcc-cchhhhhcCceeEee
Q 021300          247 TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLE-LPAFSLLMGEEEDSW  300 (314)
Q Consensus       247 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~-~~~~~~~~~~~~i~~  300 (314)
                      ++|++||++|....+..++++++++|+++.+|...++.. ++.. ++.+++++.+
T Consensus       244 g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~i~g  297 (357)
T 2cf5_A          244 SLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKVITG  297 (357)
T ss_dssp             TEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCEEEE
T ss_pred             CCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccEEEE
Confidence            999999999987668999999999999999998766555 6666 7788888874

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=1.6e-51  Score=377.04  Aligned_cols=283  Identities=42%  Similarity=0.788  Sum_probs=244.8

Q ss_pred             ccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 021300            9 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKF   88 (314)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   88 (314)
                      .+||++++...+  +.+++++++.|+|+++||||||.++|||++|++.+.|.++..++|.++|||++|+|+++|+++++|
T Consensus         3 m~mka~~~~~~~--~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~V~~vG~~v~~~   80 (348)
T 3two_A            3 VQSKGFAIFSKD--EHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGIIKEVGKGVKKF   80 (348)
T ss_dssp             EEEEEEEBCSTT--SCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCCCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             eEEEEEEEccCC--CCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCC
Confidence            468888887643  459999999999999999999999999999999999988777889999999999999999999999


Q ss_pred             CCCCEEEecccccCCCCCccccCCCCCCCCccccccccc--cCCCCccCcccceEEeecCCceEECCCCCCcccccccch
Q 021300           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK--YHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC  166 (314)
Q Consensus        89 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~--~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~  166 (314)
                      ++||||++.+...+|++|.+|++|++|+|......+...  ...+....|+|+||+++++++++++|+++++++||++++
T Consensus        81 ~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  160 (348)
T 3two_A           81 KIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLC  160 (348)
T ss_dssp             CTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGT
T ss_pred             CCCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhhhhhh
Confidence            999999987777799999999999999998433222111  111233459999999999999999999999999999999


Q ss_pred             hhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcC
Q 021300          167 AGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG  246 (314)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~  246 (314)
                      ++.|||+++.+. ++++|++|||+|+|++|++++|+|+.+|++|+++++++++++ +++++|++.++  .+++.   +..
T Consensus       161 ~~~ta~~~l~~~-~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~~lGa~~v~--~~~~~---~~~  233 (348)
T 3two_A          161 AGITTYSPLKFS-KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQ-DALSMGVKHFY--TDPKQ---CKE  233 (348)
T ss_dssp             HHHHHHHHHHHT-TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHH-HHHHTTCSEEE--SSGGG---CCS
T ss_pred             hHHHHHHHHHhc-CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHhcCCCeec--CCHHH---Hhc
Confidence            999999999876 589999999999999999999999999999999998888775 55789999988  34333   233


Q ss_pred             CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC-CCcc-cchhhhh-cCceeEee
Q 021300          247 TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLE-LPAFSLL-MGEEEDSW  300 (314)
Q Consensus       247 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~-~~~~~~~-~~~~~i~~  300 (314)
                      ++|++||++|+...+..++++|+++|+++.+|... ++.. ++...++ .+++++.+
T Consensus       234 ~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g  290 (348)
T 3two_A          234 ELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYG  290 (348)
T ss_dssp             CEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEE
T ss_pred             CCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEE
Confidence            89999999999867999999999999999999887 6666 7877887 88888874

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=3.3e-51  Score=373.85  Aligned_cols=281  Identities=34%  Similarity=0.595  Sum_probs=250.4

Q ss_pred             cccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCC
Q 021300           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKF   88 (314)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~   88 (314)
                      .||++++..++++  +++++++.|+|++|||||||.+++||++|++++.|.++. .++|.++|||++|+|+++|+++++|
T Consensus         2 ~MkA~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~   79 (340)
T 3s2e_A            2 MMKAAVVRAFGAP--LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRV   79 (340)
T ss_dssp             EEEEEEBCSTTSC--CEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSC
T ss_pred             ceEEEEEecCCCC--CEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcC
Confidence            4999999875544  899999999999999999999999999999999998764 4789999999999999999999999


Q ss_pred             CCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhh
Q 021300           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG  168 (314)
Q Consensus        89 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~  168 (314)
                      ++||||++.....+|+.|.+|.+|++|+|++....       +....|+|+||++++++.++++|+++++++|+++++++
T Consensus        80 ~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~  152 (340)
T 3s2e_A           80 KEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNT-------GYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAG  152 (340)
T ss_dssp             CTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHH
T ss_pred             CCCCEEEecCCCCCCCCChHHhCcCcccCcccccc-------CCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchh
Confidence            99999976666679999999999999999986542       34578999999999999999999999999999999999


Q ss_pred             hhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHHc
Q 021300          169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAM  245 (314)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~  245 (314)
                      .|||++++.. ++++|++|||+|+|++|++++|+|+.+|++|++++++++++ ++++++|++.++++++.+.   +.+..
T Consensus       153 ~ta~~~l~~~-~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~~lGa~~~i~~~~~~~~~~~~~~~  230 (340)
T 3s2e_A          153 VTVYKGLKVT-DTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKL-NLARRLGAEVAVNARDTDPAAWLQKEI  230 (340)
T ss_dssp             HHHHHHHHTT-TCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHTTCSEEEETTTSCHHHHHHHHH
T ss_pred             HHHHHHHHHc-CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHH-HHHHHcCCCEEEeCCCcCHHHHHHHhC
Confidence            9999999655 58999999999999999999999999999999999988777 4568999999999877543   33334


Q ss_pred             CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300          246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       246 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~  301 (314)
                      +++|++||++|+...+..++++|+++|+++.+|...++..++...++.+++++.++
T Consensus       231 g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~  286 (340)
T 3s2e_A          231 GGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGS  286 (340)
T ss_dssp             SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEEEC
T ss_pred             CCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEEEE
Confidence            58999999999887899999999999999999998777888888899999998743

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=2.6e-51  Score=377.35  Aligned_cols=289  Identities=36%  Similarity=0.634  Sum_probs=248.6

Q ss_pred             CcccccchhhhccCCCCccceee--eeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCC
Q 021300            7 QEHPKNAFGWAAKDTSGVLSPFH--FSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSK   84 (314)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (314)
                      +|.+||++++...+.  .+++++  +|.|+|+++||||||+++|||++|++++.|.++...+|.++|||++|+|+++|++
T Consensus         3 ~p~~mka~~~~~~~~--~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~GhE~~G~V~~vG~~   80 (360)
T 1piw_A            3 YPEKFEGIAIQSHED--WKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPK   80 (360)
T ss_dssp             TTTCEEEEEECCSSS--TTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTT
T ss_pred             CChheEEEEEecCCC--CeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCCCCCCcccCcCceEEEEEeCCC
Confidence            566799999877543  388889  9999999999999999999999999999887665578999999999999999999


Q ss_pred             CC-CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccc
Q 021300           85 VS-KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAP  163 (314)
Q Consensus        85 v~-~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~  163 (314)
                      ++ +|++||||++.+...+|++|.+|++|++|+|++....+.+....|....|+|+||+.++++.++++|+++++++|++
T Consensus        81 v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~  160 (360)
T 1piw_A           81 SNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAP  160 (360)
T ss_dssp             CCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHHHHGG
T ss_pred             CCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHHHhhh
Confidence            99 99999999877777799999999999999998751111111111234579999999999999999999999999999


Q ss_pred             cchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH-HHHH
Q 021300          164 LLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-DEMQ  242 (314)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~-~~~~  242 (314)
                      +++++.|||+++.+ .++++|++|||+|+|++|++++|+|+.+|++|+++++++++++ +++++|++.++++.+. +...
T Consensus       161 l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~-~~~~lGa~~v~~~~~~~~~~~  238 (360)
T 1piw_A          161 LLCGGLTVYSPLVR-NGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKRE-DAMKMGADHYIATLEEGDWGE  238 (360)
T ss_dssp             GGTHHHHHHHHHHH-TTCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHH-HHHHHTCSEEEEGGGTSCHHH
T ss_pred             hhhhHHHHHHHHHH-cCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHcCCCEEEcCcCchHHHH
Confidence            99999999999987 4589999999999999999999999999999999998887774 4568999999998776 6666


Q ss_pred             HHcCCccEEEEccCC--cccHHHHHHhhccCCEEEEEcCCCCCc-ccchhhhhcCceeEee
Q 021300          243 AAMGTMDGIIDTVSA--VHPLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMGEEEDSW  300 (314)
Q Consensus       243 ~~~~~~d~v~d~~g~--~~~~~~~~~~l~~~G~~v~~G~~~~~~-~~~~~~~~~~~~~i~~  300 (314)
                      ++.+++|++||++|.  ...+..++++|+++|+++.+|...+ . .++...++.+++++.+
T Consensus       239 ~~~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g  298 (360)
T 1piw_A          239 KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISY  298 (360)
T ss_dssp             HSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEE
T ss_pred             HhhcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEE
Confidence            666789999999998  5568899999999999999998766 5 6777778888888874

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.1e-51  Score=375.08  Aligned_cols=287  Identities=46%  Similarity=0.813  Sum_probs=244.4

Q ss_pred             cccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      .|+++.+.  ...+.++++++|.|+|+++||||||.++|||++|++++.|.++...+|.++|||++|+|+++|+++++|+
T Consensus        22 ~~~a~~~~--~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~~   99 (369)
T 1uuf_A           22 KIKAVGAY--SAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYA   99 (369)
T ss_dssp             -CEEEEBS--STTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             eEEEEEEc--CCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCCeecccCceEEEEEECCCCCCCC
Confidence            35554443  3446799999999999999999999999999999999988766556899999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCcccccccccc-CCCCccCcccceEEeecCCceEECCCC-CCcccccccchh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY-HDGTITYGGYSDIMVADEHFVVRIPEG-TPLDATAPLLCA  167 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~-~~~~~~~g~~~~~~~v~~~~~~~~p~~-~~~~~aa~~~~~  167 (314)
                      +||||++.+...+|+.|.+|++|.+|+|++....+.+.. ..|....|+|+||+.++++.++++|++ +++++|++++++
T Consensus       100 vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~~~  179 (369)
T 1uuf_A          100 PGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCA  179 (369)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGGGTH
T ss_pred             CCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhhhhhhh
Confidence            999999888888999999999999999998642222111 012245799999999999999999999 999999999999


Q ss_pred             hhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCC
Q 021300          168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT  247 (314)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~  247 (314)
                      +.|||+++.+. ++++|++|||+|+|++|++++|+|+.+|++|+++++++++++. ++++|++.++++.+.+.+.++.++
T Consensus       180 ~~tA~~al~~~-~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~-a~~lGa~~vi~~~~~~~~~~~~~g  257 (369)
T 1uuf_A          180 GITTYSPLRHW-QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKALGADEVVNSRNADEMAAHLKS  257 (369)
T ss_dssp             HHHHHHHHHHT-TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHTCSEEEETTCHHHHHTTTTC
T ss_pred             HHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHcCCcEEeccccHHHHHHhhcC
Confidence            99999999876 5899999999999999999999999999999999988887754 468999999999888877776678


Q ss_pred             ccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCc-ccchhhhhcCceeEee
Q 021300          248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMGEEEDSW  300 (314)
Q Consensus       248 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~-~~~~~~~~~~~~~i~~  300 (314)
                      +|++||++|....+..++++|+++|+++.+|...++. .++...++.+++++.+
T Consensus       258 ~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g  311 (369)
T 1uuf_A          258 FDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAG  311 (369)
T ss_dssp             EEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEE
T ss_pred             CCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEE
Confidence            9999999998767999999999999999999876655 7788888889988874

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=9.8e-50  Score=368.56  Aligned_cols=292  Identities=25%  Similarity=0.338  Sum_probs=243.2

Q ss_pred             CCCCCCCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEE
Q 021300            1 MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTE   80 (314)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~   80 (314)
                      |++.+ .|.+||++++...++  .++++++|.|+|+++||||||+++|||++|++++.|.++ ..+|.++|||++|+|++
T Consensus         1 ~~~~~-~p~~mka~~~~~~g~--~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~   76 (373)
T 1p0f_A            1 MCTAG-KDITCKAAVAWEPHK--PLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVES   76 (373)
T ss_dssp             -CCTT-SCEEEEEEEBSSTTS--CCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEE
T ss_pred             CcccC-CcceeEEEEEEcCCC--CeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC-CCCCcccCcCceEEEEE
Confidence            77554 567789988876443  488899999999999999999999999999999988765 57899999999999999


Q ss_pred             eCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccc-cccC-------------CCCccCcccceEEeecC
Q 021300           81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYH-------------DGTITYGGYSDIMVADE  146 (314)
Q Consensus        81 vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~-~~~~-------------~~~~~~g~~~~~~~v~~  146 (314)
                      +|+++++|++||||++.+. .+|+.|.+|++|++|+|++....+. |...             .+....|+|+||+.+++
T Consensus        77 vG~~v~~~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~  155 (373)
T 1p0f_A           77 IGAGVTCVKPGDKVIPLFV-PQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVAD  155 (373)
T ss_dssp             ECTTCCSCCTTCEEEECSS-CCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEET
T ss_pred             ECCCCCccCCCCEEEECCC-CCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEch
Confidence            9999999999999987665 4899999999999999998643110 1100             01123599999999999


Q ss_pred             CceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHH
Q 021300          147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIE  225 (314)
Q Consensus       147 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~  225 (314)
                      ++++++|++++++ ||.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++
T Consensus       156 ~~~~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~  233 (373)
T 1p0f_A          156 IAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKF-PKAI  233 (373)
T ss_dssp             TSEEEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHH
T ss_pred             hhEEECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHH
Confidence            9999999999999 999999999999998776778999999999999999999999999999 788888887776 5557


Q ss_pred             HcCCcEEecCCC--H---HHHHHHcC-CccEEEEccCCcccHHHHHHhhccC-CEEEEEcCCCC--CcccchhhhhcCce
Q 021300          226 RLGADSFLVSRD--Q---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLLMGEE  296 (314)
Q Consensus       226 ~~ga~~~v~~~~--~---~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~--~~~~~~~~~~~~~~  296 (314)
                      ++|++.++++.+  .   +.+.++++ ++|+|||++|....+..++++++++ |+++.+|....  +.+++...++.++ 
T Consensus       234 ~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-  312 (373)
T 1p0f_A          234 ELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGR-  312 (373)
T ss_dssp             HTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTC-
T ss_pred             HcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccCc-
Confidence            999999998763  2   34445544 7999999999866789999999999 99999998653  4567777777777 


Q ss_pred             eEee
Q 021300          297 EDSW  300 (314)
Q Consensus       297 ~i~~  300 (314)
                      ++.+
T Consensus       313 ~i~g  316 (373)
T 1p0f_A          313 SLKG  316 (373)
T ss_dssp             EEEE
T ss_pred             eEEe
Confidence            7763

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=2.8e-50  Score=372.81  Aligned_cols=290  Identities=21%  Similarity=0.308  Sum_probs=245.1

Q ss_pred             CCCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCC
Q 021300            5 PEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSK   84 (314)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (314)
                      ..++++||++++..++++  ++++++|.|+|+++||||||+++|||++|++++.|.++...+|.++|||++|+|+++|++
T Consensus         3 ~~~~~tmkA~v~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~   80 (378)
T 3uko_A            3 QGQVITCKAAVAYEPNKP--LVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG   80 (378)
T ss_dssp             TTSCEEEEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEECTT
T ss_pred             cccceeeEEEEEecCCCc--cEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCCCCCCccCCccceEEEEEeCCC
Confidence            347888999999875544  899999999999999999999999999999999998776789999999999999999999


Q ss_pred             CCCCCCCCEEEecccccCCCCCccccCCCCCCCCcccccc-cccc--------------CCCCccCcccceEEeecCCce
Q 021300           85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY-ANKY--------------HDGTITYGGYSDIMVADEHFV  149 (314)
Q Consensus        85 v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~~~~--------------~~~~~~~g~~~~~~~v~~~~~  149 (314)
                      +++|++||||++.+. .+|+.|.+|.+|++|+|++..... .|..              .......|+|+||+.++++.+
T Consensus        81 v~~~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  159 (378)
T 3uko_A           81 VTEVQAGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSV  159 (378)
T ss_dssp             CCSCCTTCEEEECSS-CCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             CCcCCCCCEEEEecC-CCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhhe
Confidence            999999999986665 489999999999999999864311 0100              001123479999999999999


Q ss_pred             EECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcC
Q 021300          150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLG  228 (314)
Q Consensus       150 ~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~g  228 (314)
                      +++|+++++++|+.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++++|
T Consensus       160 ~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~-~~a~~lG  238 (378)
T 3uko_A          160 AKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKY-ETAKKFG  238 (378)
T ss_dssp             EECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHH-HHHHTTT
T ss_pred             EECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHHcC
Confidence            99999999999999999999999999777779999999999999999999999999999 788888887776 5668999


Q ss_pred             CcEEecCC--CH---HHHHHHcC-CccEEEEccCCcccHHHHHHhhccC-CEEEEEcCCCC--CcccchhhhhcCceeEe
Q 021300          229 ADSFLVSR--DQ---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLLMGEEEDS  299 (314)
Q Consensus       229 a~~~v~~~--~~---~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~--~~~~~~~~~~~~~~~i~  299 (314)
                      ++.++++.  +.   +.+.++++ ++|++||++|+...+..++++++++ |+++.+|....  ...++...++. ++++.
T Consensus       239 a~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~-~~~i~  317 (378)
T 3uko_A          239 VNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWK  317 (378)
T ss_dssp             CCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHT-TCEEE
T ss_pred             CcEEEccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhc-CcEEE
Confidence            99999886  32   44555544 7999999999977799999999996 99999998653  34555565554 67776

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=2.2e-50  Score=372.37  Aligned_cols=283  Identities=23%  Similarity=0.355  Sum_probs=245.3

Q ss_pred             CCCCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCC
Q 021300            4 APEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGS   83 (314)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~   83 (314)
                      .+.+|.+||++++...   +.++++++|.|+|++|||||||.+++||++|++++.|.++ .++|.++|||++|+|+++|+
T Consensus        17 ~~~~p~~mkA~v~~~~---~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~p~v~G~e~~G~V~~vG~   92 (370)
T 4ej6_A           17 NLYFQSMMKAVRLESV---GNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFP-STPPVTLGHEFCGIVVEAGS   92 (370)
T ss_dssp             ----CCEEEEEEEEET---TEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSEECCCSEEEEEEEECT
T ss_pred             ccccchheEEEEEecC---CceEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCC-CCCCeecCcceEEEEEEECC
Confidence            3567888999998764   4599999999999999999999999999999999998774 57899999999999999999


Q ss_pred             CCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccc
Q 021300           84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAP  163 (314)
Q Consensus        84 ~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~  163 (314)
                      ++++|++||||++.+. .+|+.|.+|..|++|+|.+....       |....|+|+||++++++.++++|+++++++|+ 
T Consensus        93 ~v~~~~vGdrV~~~~~-~~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-  163 (370)
T 4ej6_A           93 AVRDIAPGARITGDPN-ISCGRCPQCQAGRVNLCRNLRAI-------GIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-  163 (370)
T ss_dssp             TCCSSCTTCEEEECCE-ECCSSSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-
T ss_pred             CCCCCCCCCEEEECCC-CCCCCChHHhCcCcccCCCcccc-------CCCCCCcceEEEEEchhhEEECCCCCCHHHHh-
Confidence            9999999999988776 49999999999999999986442       34468999999999999999999999999997 


Q ss_pred             cchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHH
Q 021300          164 LLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ  242 (314)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~  242 (314)
                      ++.++.++|+++... ++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++. ++++++|++.++++.+.+...
T Consensus       164 l~~~~~ta~~~l~~~-~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~lGa~~vi~~~~~~~~~  241 (370)
T 4ej6_A          164 FCEPLACCLHGVDLS-GIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKR-RLAEEVGATATVDPSAGDVVE  241 (370)
T ss_dssp             GHHHHHHHHHHHHHH-TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHH-HHHHHHTCSEEECTTSSCHHH
T ss_pred             hhhHHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHcCCCEEECCCCcCHHH
Confidence            778899999999654 48999999999999999999999999999 777777776655 677899999999987765444


Q ss_pred             HHc-------CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC--CcccchhhhhcCceeEeee
Q 021300          243 AAM-------GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       243 ~~~-------~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~--~~~~~~~~~~~~~~~i~~~  301 (314)
                      .+.       +++|+|||++|....+..++++|+++|+++.+|...+  +.+++...++.+++++.++
T Consensus       242 ~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  309 (370)
T 4ej6_A          242 AIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGS  309 (370)
T ss_dssp             HHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEEC
T ss_pred             HHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEe
Confidence            332       2799999999987779999999999999999998765  6788999999999999843

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=1.4e-49  Score=367.78  Aligned_cols=289  Identities=22%  Similarity=0.326  Sum_probs=241.8

Q ss_pred             CCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCC
Q 021300            6 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKV   85 (314)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   85 (314)
                      ..|++||++++...+.  .+++++++.|+|+++||||||++++||++|++++.|. +...+|.++|||++|+|+++|+++
T Consensus         4 ~~p~~mka~~~~~~g~--~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~~~P~v~GhE~~G~V~~vG~~v   80 (376)
T 1e3i_A            4 GKVIKCKAAIAWKTGS--PLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVLGHECAGIVESVGPGV   80 (376)
T ss_dssp             TSCEEEEEEEBCSTTS--CCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SCCCSSBCCCCEEEEEEEEECTTC
T ss_pred             CCChheeEEEEecCCC--CeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CCCCCCcccCccccEEEEEECCCC
Confidence            4566788888876433  4888999999999999999999999999999988876 445689999999999999999999


Q ss_pred             CCCCCCCEEEecccccCCCCCccccCCCCCCCCccc----ccc-ccccCC-------------CCccCcccceEEeecCC
Q 021300           86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVI----MTY-ANKYHD-------------GTITYGGYSDIMVADEH  147 (314)
Q Consensus        86 ~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~----~~~-~~~~~~-------------~~~~~g~~~~~~~v~~~  147 (314)
                      ++|++||||++.+.. +|++|.+|++|++|+|++..    ... .|....             +....|+|+||++++++
T Consensus        81 ~~~~vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~  159 (376)
T 1e3i_A           81 TNFKPGDKVIPFFAP-QCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEA  159 (376)
T ss_dssp             CSCCTTCEEEECSSC-CCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGG
T ss_pred             ccCCCCCEEEECCcC-CCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEeccc
Confidence            999999999876654 89999999999999998754    100 011100             01135999999999999


Q ss_pred             ceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHH
Q 021300          148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIER  226 (314)
Q Consensus       148 ~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~  226 (314)
                      .++++|+++++++|+.+++++.|||+++.+...+++|++|||+|+|++|++++|+|+.+|+ +|++++++++++ +++++
T Consensus       160 ~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~  238 (376)
T 1e3i_A          160 NLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKF-PKAKA  238 (376)
T ss_dssp             GEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHH
T ss_pred             cEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHH
Confidence            9999999999999999999999999998777778999999999999999999999999999 788888888777 45579


Q ss_pred             cCCcEEecCCC--H---HHHHHHcC-CccEEEEccCCcccHHHHHHhhccC-CEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300          227 LGADSFLVSRD--Q---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEKPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       227 ~ga~~~v~~~~--~---~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~i~  299 (314)
                      +|++.++++.+  .   +.+.++++ ++|++||++|....+..++++++++ |+++.+|....+..++...++.++ ++.
T Consensus       239 lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~-~i~  317 (376)
T 1e3i_A          239 LGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGR-SIN  317 (376)
T ss_dssp             TTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTTC-EEE
T ss_pred             hCCcEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCccccCHHHhhccC-eEE
Confidence            99999998763  2   34445443 7999999999866789999999999 999999986556678887887777 776


Q ss_pred             e
Q 021300          300 W  300 (314)
Q Consensus       300 ~  300 (314)
                      +
T Consensus       318 g  318 (376)
T 1e3i_A          318 G  318 (376)
T ss_dssp             E
T ss_pred             E
Confidence            3

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.2e-49  Score=367.63  Aligned_cols=287  Identities=23%  Similarity=0.351  Sum_probs=243.0

Q ss_pred             cccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCC
Q 021300            8 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSK   87 (314)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   87 (314)
                      +.+||++++...++  +++++++|.|+|+++||||||+++|||++|++++.|.++ ..+|.++|||++|+|+++|+++++
T Consensus         4 ~~~mka~~~~~~g~--~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~v~~   80 (371)
T 1f8f_A            4 LKDIIAAVTPCKGA--DFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTE   80 (371)
T ss_dssp             CEEEEEEEBCSTTC--CCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             cccceEEEEcCCCC--CeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC-CCCCcccCcccceEEEEeCCCCCC
Confidence            34588888876543  388999999999999999999999999999999988765 467999999999999999999999


Q ss_pred             CCCCCEEEecccccCCCCCccccCCCCCCCCcccc-cccc-----cc----CCC------CccCcccceEEeecCCceEE
Q 021300           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIM-TYAN-----KY----HDG------TITYGGYSDIMVADEHFVVR  151 (314)
Q Consensus        88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~-~~~~-----~~----~~~------~~~~g~~~~~~~v~~~~~~~  151 (314)
                      |++||||++.+  .+|++|.+|++|++|+|++... .+.+     ..    ..|      ....|+|+||++++++++++
T Consensus        81 ~~~GdrV~~~~--~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~  158 (371)
T 1f8f_A           81 LQVGDHVVLSY--GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVK  158 (371)
T ss_dssp             CCTTCEEEECC--CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEE
T ss_pred             CCCCCEEEecC--CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEE
Confidence            99999998877  5899999999999999987642 1111     00    001      12369999999999999999


Q ss_pred             CCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCc
Q 021300          152 IPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGAD  230 (314)
Q Consensus       152 ~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~  230 (314)
                      +|+++++++|+.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++++|++
T Consensus       159 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~-~~a~~lGa~  237 (371)
T 1f8f_A          159 VTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRL-ELAKQLGAT  237 (371)
T ss_dssp             ECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHH-HHHHHHTCS
T ss_pred             CCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHHHcCCC
Confidence            999999999999999999999999766678999999999999999999999999999 688888887766 555899999


Q ss_pred             EEecCCCHH---HHHHHcC-CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC--CcccchhhhhcCceeEee
Q 021300          231 SFLVSRDQD---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       231 ~~v~~~~~~---~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~--~~~~~~~~~~~~~~~i~~  300 (314)
                      .++++.+.+   .+.+.++ ++|++||++|....+..++++|+++|+++.+|....  +..++...++.+++++.+
T Consensus       238 ~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g  313 (371)
T 1f8f_A          238 HVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILG  313 (371)
T ss_dssp             EEEETTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEE
T ss_pred             EEecCCccCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCEEEE
Confidence            999987643   3444444 799999999987678999999999999999998753  467888888888988874

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=7.2e-49  Score=362.85  Aligned_cols=289  Identities=22%  Similarity=0.331  Sum_probs=241.8

Q ss_pred             CCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCC
Q 021300            6 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKV   85 (314)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   85 (314)
                      ..|.+||++++...++  .++++++|.|+|+++||||||+++|||++|++++.|.++. .+|.++|||++|+|+++|+++
T Consensus         4 ~~~~~mkA~~~~~~g~--~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~P~v~GhE~~G~V~~vG~~v   80 (374)
T 2jhf_A            4 GKVIKCKAAVLWEEKK--PFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPVIAGHEAAGIVESIGEGV   80 (374)
T ss_dssp             TSCEEEEEEEBCSTTS--CCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-CSSBCCCCSEEEEEEEECTTC
T ss_pred             CCceeEEEEEEecCCC--ceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCC-CCCcccCcCceEEEEEECCCC
Confidence            3467789888876543  3888999999999999999999999999999999887654 389999999999999999999


Q ss_pred             CCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccc-cccC-------------CCCccCcccceEEeecCCceEE
Q 021300           86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYH-------------DGTITYGGYSDIMVADEHFVVR  151 (314)
Q Consensus        86 ~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~-~~~~-------------~~~~~~g~~~~~~~v~~~~~~~  151 (314)
                      ++|++||||++.+. .+|+.|.+|++|++|+|++....+. |...             .+....|+|+||+.++++.+++
T Consensus        81 ~~~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~  159 (374)
T 2jhf_A           81 TTVRPGDKVIPLFT-PQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAK  159 (374)
T ss_dssp             CSCCTTCEEEECSS-CCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEE
T ss_pred             CCCCCCCEEEECCC-CCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeEE
Confidence            99999999987665 4899999999999999998643110 1100             0111359999999999999999


Q ss_pred             CCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCc
Q 021300          152 IPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGAD  230 (314)
Q Consensus       152 ~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~  230 (314)
                      +|+++++++|+.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++. ++++++|++
T Consensus       160 iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-~~~~~lGa~  238 (374)
T 2jhf_A          160 IDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKF-AKAKEVGAT  238 (374)
T ss_dssp             CCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHTTCS
T ss_pred             CCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHHhCCc
Confidence            999999999999999999999998776778999999999999999999999999999 788888887777 455799999


Q ss_pred             EEecCCC-----HHHHHHHcC-CccEEEEccCCcccHHHHHHhhccC-CEEEEEcCCCC--CcccchhhhhcCceeEee
Q 021300          231 SFLVSRD-----QDEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       231 ~~v~~~~-----~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~--~~~~~~~~~~~~~~~i~~  300 (314)
                      .++++.+     .+.+.++++ ++|++||++|....+..++++++++ |+++.+|....  +.+++...++.++ ++.+
T Consensus       239 ~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g  316 (374)
T 2jhf_A          239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKG  316 (374)
T ss_dssp             EEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEE
T ss_pred             eEecccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCC-eEEE
Confidence            9998763     234445443 7999999999876789999999999 99999998653  4567777777777 7763

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.6e-49  Score=363.62  Aligned_cols=289  Identities=22%  Similarity=0.318  Sum_probs=242.7

Q ss_pred             CCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhh-hHhcCCCCCCCCCcccccccEEEEEeCCC
Q 021300            6 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLH-MIKNEWGNTIYPIVPGHEIVGVVTEVGSK   84 (314)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~-~~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (314)
                      ..|.+||++++...++  +++++++|.|+|+++||||||.++|||++|++ ++.|.++ ..+|.++|||++|+|+++|++
T Consensus         4 ~~~~~mka~~~~~~~~--~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~   80 (374)
T 1cdo_A            4 GKVIKCKAAVAWEANK--PLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAGIVESVGPG   80 (374)
T ss_dssp             TSCEEEEEEEBCSTTS--CCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT-TSCSEECCCCEEEEEEEECTT
T ss_pred             CCcceeEEEEEecCCC--CeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC-CCCCcccCccceEEEEEECCC
Confidence            4567799988876443  38889999999999999999999999999999 8888665 578999999999999999999


Q ss_pred             CCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccc-cccCCC-------------CccCcccceEEeecCCceE
Q 021300           85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYHDG-------------TITYGGYSDIMVADEHFVV  150 (314)
Q Consensus        85 v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~-~~~~~~-------------~~~~g~~~~~~~v~~~~~~  150 (314)
                      +++|++||||++.+.. +|+.|.+|++|++|+|++....+. |....+             ....|+|+||+++++++++
T Consensus        81 V~~~~vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~  159 (374)
T 1cdo_A           81 VTEFQPGEKVIPLFIS-QCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVA  159 (374)
T ss_dssp             CCSCCTTCEEEECSSC-CCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEE
T ss_pred             CccCCCCCEEEeCCCC-CCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhheE
Confidence            9999999999876654 899999999999999998643210 110001             0135999999999999999


Q ss_pred             ECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCC
Q 021300          151 RIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA  229 (314)
Q Consensus       151 ~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga  229 (314)
                      ++|+++++++|+.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++++|+
T Consensus       160 ~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-~~~~~lGa  238 (374)
T 1cdo_A          160 KIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKF-EKAKVFGA  238 (374)
T ss_dssp             ECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHTTC
T ss_pred             ECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHHHhCC
Confidence            9999999999999999999999998766778999999999999999999999999999 788888887777 45579999


Q ss_pred             cEEecCCC--H---HHHHHHcC-CccEEEEccCCcccHHHHHHhhccC-CEEEEEcCCCC-CcccchhhhhcCceeEee
Q 021300          230 DSFLVSRD--Q---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK-PLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       230 ~~~v~~~~--~---~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~-~~~~~~~~~~~~~~~i~~  300 (314)
                      +.++++.+  .   +.+.++++ ++|++||++|....+..++++++++ |+++.+|.... +.+++...++.++ ++.+
T Consensus       239 ~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~-~i~g  316 (374)
T 1cdo_A          239 TDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGR-TWKG  316 (374)
T ss_dssp             CEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTC-EEEE
T ss_pred             ceEEeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhcCC-eEEE
Confidence            99998763  2   34444443 7999999999866789999999999 99999998764 5677777777777 7763

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=4e-49  Score=364.44  Aligned_cols=289  Identities=21%  Similarity=0.291  Sum_probs=242.1

Q ss_pred             CcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCC
Q 021300            7 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS   86 (314)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   86 (314)
                      .|.+||++++...++  .+++++++.|+|+++||||||+++|||++|++++.|.++...+|.++|||++|+|+++|++++
T Consensus         3 ~p~~mkA~~~~~~~~--~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~   80 (373)
T 2fzw_A            3 EVIKCKAAVAWEAGK--PLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVT   80 (373)
T ss_dssp             CCEEEEEEEBCSTTS--CCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             CccceEEEEEecCCC--CcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCCCCCCccccccccEEEEEECCCCC
Confidence            456788888876443  488899999999999999999999999999999988766557899999999999999999999


Q ss_pred             CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccc-cccC-------------CCCccCcccceEEeecCCceEEC
Q 021300           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYH-------------DGTITYGGYSDIMVADEHFVVRI  152 (314)
Q Consensus        87 ~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~-~~~~-------------~~~~~~g~~~~~~~v~~~~~~~~  152 (314)
                      +|++||||++.+.. +|+.|.+|++|++|+|++....+. |...             .+....|+|+||++++++.++++
T Consensus        81 ~~~vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i  159 (373)
T 2fzw_A           81 KLKAGDTVIPLYIP-QCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKI  159 (373)
T ss_dssp             SCCTTCEEEECSSC-CCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEEC
T ss_pred             CCCCCCEEEECCCC-CCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEEC
Confidence            99999999876654 899999999999999987642110 1100             01123599999999999999999


Q ss_pred             CCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcE
Q 021300          153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADS  231 (314)
Q Consensus       153 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~  231 (314)
                      |+++++++|+.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++++|++.
T Consensus       160 P~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~-~~~~~lGa~~  238 (373)
T 2fzw_A          160 DPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKF-ARAKEFGATE  238 (373)
T ss_dssp             CTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHHHHTCSE
T ss_pred             CCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHHcCCce
Confidence            99999999999999999999998776778999999999999999999999999999 788888887776 4557899999


Q ss_pred             EecCCC--H---HHHHHHcC-CccEEEEccCCcccHHHHHHhhccC-CEEEEEcCCCC--CcccchhhhhcCceeEee
Q 021300          232 FLVSRD--Q---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       232 ~v~~~~--~---~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~--~~~~~~~~~~~~~~~i~~  300 (314)
                      ++++.+  .   +.+.++++ ++|++||++|....+..++++++++ |+++.+|....  +.+++...++.++ ++.+
T Consensus       239 vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g  315 (373)
T 2fzw_A          239 CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGR-TWKG  315 (373)
T ss_dssp             EECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEE
T ss_pred             EeccccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCC-EEEE
Confidence            998763  2   34445544 7999999999876789999999999 99999998653  4567777777777 7763

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=1.6e-49  Score=362.59  Aligned_cols=279  Identities=32%  Similarity=0.588  Sum_probs=244.2

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ||++++...+.  .++++++|.|+|++|||||||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus         1 Mka~~~~~~g~--~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~   78 (339)
T 1rjw_A            1 MKAAVVEQFKE--PLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLK   78 (339)
T ss_dssp             CEEEEBSSTTS--CCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEcCCCC--CcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCC
Confidence            77888876543  3888999999999999999999999999999999887652 46799999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||||++.+....|+.|.+|++|++|+|++....       |....|+|+||+.++++.++++|+++++++|+++++++.
T Consensus        79 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~  151 (339)
T 1rjw_A           79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA-------GYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGV  151 (339)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHH
T ss_pred             CCCEEEEecCCCCCCCCchhhCcCcccCCCccee-------ecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHH
Confidence            9999988776667999999999999999876432       234679999999999999999999999999999999999


Q ss_pred             hhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHHcC
Q 021300          170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG  246 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~~~~  246 (314)
                      |||+++.+. .+++|++|||+|+|++|++++|+++.+|++|+++++++++.+ +++++|++.++++.+.+   .+.+.++
T Consensus       152 ta~~~l~~~-~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~lGa~~~~d~~~~~~~~~~~~~~~  229 (339)
T 1rjw_A          152 TTYKALKVT-GAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLE-LAKELGADLVVNPLKEDAAKFMKEKVG  229 (339)
T ss_dssp             HHHHHHHHH-TCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHH-HHHHTTCSEEECTTTSCHHHHHHHHHS
T ss_pred             HHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHCCCCEEecCCCccHHHHHHHHhC
Confidence            999999877 489999999999988999999999999999999998887775 44789999988877543   3444446


Q ss_pred             CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          247 TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       247 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                      ++|++||++|....+..++++|+++|+++.+|...++..++...++.+++++.+
T Consensus       230 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g  283 (339)
T 1rjw_A          230 GVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIG  283 (339)
T ss_dssp             SEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEE
T ss_pred             CCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEE
Confidence            899999999986678999999999999999998877677888888889888874

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1e-49  Score=366.59  Aligned_cols=279  Identities=26%  Similarity=0.422  Sum_probs=239.4

Q ss_pred             cccccchhhhccCCCCccceeeeeecC-CCCCeEEEEEeeeccChhhhhhHhcCCC---CCCCCCcccccccEEEEEeCC
Q 021300            8 EHPKNAFGWAAKDTSGVLSPFHFSRRA-TGEKDVTFKVTHCGICHSDLHMIKNEWG---NTIYPIVPGHEIVGVVTEVGS   83 (314)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~eVlVkv~a~~l~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~   83 (314)
                      +++||++++..++.  .++++++|.|+ |++|||||||.++|||++|++.+.|.++   ...+|.++|||++|+|+++|+
T Consensus        13 ~~~mka~~~~~~g~--~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~   90 (359)
T 1h2b_A           13 VERLKAARLHEYNK--PLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAE   90 (359)
T ss_dssp             ----CEEEESSTTS--CCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECT
T ss_pred             hhhceEEEEecCCC--CcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECC
Confidence            56799999877543  48889999999 9999999999999999999999988764   347899999999999999999


Q ss_pred             CCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCccccc-
Q 021300           84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATA-  162 (314)
Q Consensus        84 ~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa-  162 (314)
                      ++++|++||||+.. ...+|++|.+|++|++++|++....       |....|+|+||+.+++++++++|+++++++|+ 
T Consensus        91 ~v~~~~vGdrV~~~-~~~~Cg~C~~C~~g~~~~C~~~~~~-------G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~  162 (359)
T 1h2b_A           91 GVEGLEKGDPVILH-PAVTDGTCLACRAGEDMHCENLEFP-------GLNIDGGFAEFMRTSHRSVIKLPKDISREKLVE  162 (359)
T ss_dssp             TCCSCCTTCEEEEC-SCBCCSCSHHHHTTCGGGCTTCBCB-------TTTBCCSSBSEEEECGGGEEECCTTCCHHHHHH
T ss_pred             CCCCCCCCCEEEeC-CCCCCCCChhhhCcCcccCCCcccc-------ccCCCCcccceEEechHhEEECCCCCCHHHHhh
Confidence            99999999999654 4458999999999999999876431       33467999999999999999999999999998 


Q ss_pred             --ccchhhhhhhhhhHhc-CCCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCCcEEecCCCH
Q 021300          163 --PLLCAGITVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQ  238 (314)
Q Consensus       163 --~~~~~~~ta~~~l~~~-~~~~~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~  238 (314)
                        ++++++.|||+++.+. .++++|++|||+|+|++|++++|+|+.+ |++|++++++++++ ++++++|++.++|+++.
T Consensus       163 ~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~-~~~~~lGa~~vi~~~~~  241 (359)
T 1h2b_A          163 MAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKL-KLAERLGADHVVDARRD  241 (359)
T ss_dssp             TGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHH-HHHHHTTCSEEEETTSC
T ss_pred             ccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHHHHhCCCEEEeccch
Confidence              8899999999999875 5689999999999999999999999999 99999999888776 45579999999998775


Q ss_pred             --HHHHHHcC--CccEEEEccCCcc--cHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          239 --DEMQAAMG--TMDGIIDTVSAVH--PLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       239 --~~~~~~~~--~~d~v~d~~g~~~--~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                        +.+.++++  ++|++||++|+..  .+..++++  ++|+++.+|...++ .++...++.+++++.+
T Consensus       242 ~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~-~~~~~~~~~~~~~i~g  306 (359)
T 1h2b_A          242 PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL-RFPTIRVISSEVSFEG  306 (359)
T ss_dssp             HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC-CCCHHHHHHTTCEEEE
T ss_pred             HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC-CCCHHHHHhCCcEEEE
Confidence              45556654  6999999999875  57788877  99999999987666 7888888889998874

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=2.7e-49  Score=361.82  Aligned_cols=277  Identities=26%  Similarity=0.334  Sum_probs=239.1

Q ss_pred             cccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC--CCCCCCcccccccEEEEEeCCCCCC
Q 021300           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG--NTIYPIVPGHEIVGVVTEVGSKVSK   87 (314)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~--~~~~p~~~G~e~~G~V~~vG~~v~~   87 (314)
                      +||++++..++.  .+++++++.|+|+++||||||+++|||++|++++.|.++  ...+|.++|||++|+|+++|++ ++
T Consensus         3 ~mka~~~~~~g~--~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~   79 (344)
T 2h6e_A            3 KSKAALLKKFSE--PLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AK   79 (344)
T ss_dssp             EEEBCEECSCCC-------EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CC
T ss_pred             eeEEEEEecCCC--CCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CC
Confidence            599999877543  488899999999999999999999999999999988765  3468999999999999999999 99


Q ss_pred             CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeec-CCceEECCCCCCcccccccch
Q 021300           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVAD-EHFVVRIPEGTPLDATAPLLC  166 (314)
Q Consensus        88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~-~~~~~~~p~~~~~~~aa~~~~  166 (314)
                      |++||||+.. ...+|++|.+|++|.+|+|++....       |....|+|+||++++ +++++++ +++++++|+++++
T Consensus        80 ~~~GdrV~~~-~~~~Cg~C~~C~~g~~~~C~~~~~~-------G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~  150 (344)
T 2h6e_A           80 VKKGDNVVVY-ATWGDLTCRYCREGKFNICKNQIIP-------GQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLAD  150 (344)
T ss_dssp             CCTTCEEEEC-SCBCCSCSTTGGGTCGGGCTTCBCB-------TTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGT
T ss_pred             CCCCCEEEEC-CCCCCCCChhhhCCCcccCCCcccc-------ccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhh
Confidence            9999999644 4458999999999999999876321       334679999999999 9999999 9999999999999


Q ss_pred             hhhhhhhhhHhc----CCCCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCChhhHHHHHHHcCCcEEecCCC-HH
Q 021300          167 AGITVYSPLRFY----GLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERLGADSFLVSRD-QD  239 (314)
Q Consensus       167 ~~~ta~~~l~~~----~~~~~g~~vlI~Gag~vG~~a~~~a~~~--g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~-~~  239 (314)
                      ++.|||+++...    +.+ +|++|||+|+|++|++++|+|+.+  |++|++++++++++ ++++++|++.++++++ .+
T Consensus       151 ~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~-~~~~~lGa~~vi~~~~~~~  228 (344)
T 2h6e_A          151 AGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHR-DFALELGADYVSEMKDAES  228 (344)
T ss_dssp             HHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHH-HHHHHHTCSEEECHHHHHH
T ss_pred             hhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHH-HHHHHhCCCEEeccccchH
Confidence            999999999877    257 999999999999999999999999  99998888887776 5557899999998877 66


Q ss_pred             HHHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          240 EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       240 ~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                      .+.++++  ++|++||++|....+..++++++++|+++.+|.+.++..++...++.+++++.+
T Consensus       229 ~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g  291 (344)
T 2h6e_A          229 LINKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLG  291 (344)
T ss_dssp             HHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHHHTTCEEEE
T ss_pred             HHHHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHHHHhhCCcEEEE
Confidence            6666654  799999999998669999999999999999998776778888888889988874

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=3e-49  Score=362.05  Aligned_cols=278  Identities=22%  Similarity=0.305  Sum_probs=228.7

Q ss_pred             ccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhc-CCC--CCCCCCcccccccEEEEEeCCCC
Q 021300            9 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKN-EWG--NTIYPIVPGHEIVGVVTEVGSKV   85 (314)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~-~~~--~~~~p~~~G~e~~G~V~~vG~~v   85 (314)
                      ..||++++..++.  .++++++|.|+|+++||||||.++|||++|++++.| .++  ...+|.++|||++|+|+++|+++
T Consensus         3 ~~mka~~~~~~g~--~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v   80 (348)
T 2d8a_A            3 EKMVAIMKTKPGY--GAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGV   80 (348)
T ss_dssp             CEEEEEEECSSSS--SCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTC
T ss_pred             CcceEEEEECCCC--CEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCC
Confidence            4599999877542  688999999999999999999999999999999988 432  24678999999999999999999


Q ss_pred             CCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccc
Q 021300           86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL  165 (314)
Q Consensus        86 ~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~  165 (314)
                      ++|++||||++.+.. +|++|.+|++|++|+|++....       |....|+|+||++++++.++++|+++++++|+.+.
T Consensus        81 ~~~~vGdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~  152 (348)
T 2d8a_A           81 EGIEVGDYVSVETHI-VCGKCYACRRGQYHVCQNTKIF-------GVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE  152 (348)
T ss_dssp             CSCCTTCEEEECCEE-CCSCCC------------CEET-------TTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHH
T ss_pred             CcCCCCCEEEEcCCC-CCCCChhhhCcCcccCCCCCee-------cCCCCCcCcceEEeChHHeEECCCCCCHHHHHhhh
Confidence            999999999877655 8999999999999999986432       23467999999999999999999999999998774


Q ss_pred             hhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HH
Q 021300          166 CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD---EM  241 (314)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~  241 (314)
                       ++.|||+++. ..++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++. ++++++|++.++++++.+   .+
T Consensus       153 -~~~ta~~~l~-~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~-~~~~~~Ga~~~~~~~~~~~~~~v  228 (348)
T 2d8a_A          153 -PLGNAVDTVL-AGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRR-ELAKKVGADYVINPFEEDVVKEV  228 (348)
T ss_dssp             -HHHHHHHHHT-TSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHH-HHHHHHTCSEEECTTTSCHHHHH
T ss_pred             -HHHHHHHHHH-hcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHhCCCEEECCCCcCHHHHH
Confidence             7889999995 4557 99999999999999999999999999 999999887766 455789999999887644   34


Q ss_pred             HHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccch-hhhhcCceeEee
Q 021300          242 QAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA-FSLLMGEEEDSW  300 (314)
Q Consensus       242 ~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~-~~~~~~~~~i~~  300 (314)
                      .++++  ++|++||++|....+..++++++++|+++.+|...++..++. ..++.+++++.+
T Consensus       229 ~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g  290 (348)
T 2d8a_A          229 MDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYG  290 (348)
T ss_dssp             HHHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTTCEEEE
T ss_pred             HHHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCCcEEEE
Confidence            44444  699999999986678999999999999999998777778888 788889988874

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=5.6e-49  Score=359.79  Aligned_cols=281  Identities=26%  Similarity=0.413  Sum_probs=242.3

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC--CCCCCcccccccEEEEEeCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN--TIYPIVPGHEIVGVVTEVGSKVSKF   88 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~   88 (314)
                      ||++++..++++  ++++++|.|+|++|||||||++++||++|++++.|.++.  .++|.++|||++|+|+++|+++++|
T Consensus         1 MkA~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~   78 (345)
T 3jv7_A            1 MKAVQYTEIGSE--PVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGF   78 (345)
T ss_dssp             CEEEEECSTTSC--CEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSC
T ss_pred             CeEEEEcCCCCc--eEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCC
Confidence            788888876554  889999999999999999999999999999999887542  4789999999999999999999999


Q ss_pred             CCCCEEEecccccCCCCCccccCCCCCCCCc-cccccccccCCCCccCcccceEEeec-CCceEECCCCCCcccccccch
Q 021300           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPK-VIMTYANKYHDGTITYGGYSDIMVAD-EHFVVRIPEGTPLDATAPLLC  166 (314)
Q Consensus        89 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~-~~~~~~~~~~~~~~~~g~~~~~~~v~-~~~~~~~p~~~~~~~aa~~~~  166 (314)
                      ++||||++.+.. +|++|.+|.+|++|+|.+ ..+.+.   ..+....|+|+||++++ .+.++++|+ +++++|+++++
T Consensus        79 ~vGdrV~~~~~~-~cg~C~~c~~g~~~~c~~~~~~~~~---~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~  153 (345)
T 3jv7_A           79 GVGDAVAVYGPW-GCGACHACARGRENYCTRAADLGIT---PPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTD  153 (345)
T ss_dssp             CTTCEEEECCSC-CCSSSHHHHTTCGGGCSSHHHHTCC---CBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGT
T ss_pred             CCCCEEEEecCC-CCCCChHHHCcCcCcCccccccccc---cCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhh
Confidence            999999877665 999999999999999943 333211   12445689999999999 899999999 99999999999


Q ss_pred             hhhhhhhhhHh-cCCCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCCcEEecCCC--HHHHH
Q 021300          167 AGITVYSPLRF-YGLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRD--QDEMQ  242 (314)
Q Consensus       167 ~~~ta~~~l~~-~~~~~~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~--~~~~~  242 (314)
                      ++.|||+++.+ ...+++|++|||+|+|++|++++|+|+.+ +++|++++++++++ ++++++|++.++++++  .+.+.
T Consensus       154 ~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~-~~~~~lGa~~~i~~~~~~~~~v~  232 (345)
T 3jv7_A          154 AGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRL-ALAREVGADAAVKSGAGAADAIR  232 (345)
T ss_dssp             TTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHH-HHHHHTTCSEEEECSTTHHHHHH
T ss_pred             hHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHHHcCCCEEEcCCCcHHHHHH
Confidence            99999999988 44589999999999999999999999998 67999988888776 5668999999998866  23455


Q ss_pred             HHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEee
Q 021300          243 AAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       243 ~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~~  300 (314)
                      ++++  ++|++||++|+...+..++++|+++|+++.+|...+ +..++. .++.+++++.+
T Consensus       233 ~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g  292 (345)
T 3jv7_A          233 ELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVT  292 (345)
T ss_dssp             HHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEEC
T ss_pred             HHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEEE
Confidence            5554  799999999998679999999999999999998776 677775 77888888873

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.4e-48  Score=356.61  Aligned_cols=280  Identities=25%  Similarity=0.318  Sum_probs=237.4

Q ss_pred             ccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhc-CCC--CCCCCCcccccccEEEEEeCCCC
Q 021300            9 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKN-EWG--NTIYPIVPGHEIVGVVTEVGSKV   85 (314)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~-~~~--~~~~p~~~G~e~~G~V~~vG~~v   85 (314)
                      .+||++++..   ++.++++++|.|+|+++||||||.++|||++|++.+.+ .++  ...+|.++|||++|+|+++|+++
T Consensus         3 ~~mka~~~~~---~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v   79 (352)
T 1e3j_A            3 SDNLSAVLYK---QNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNV   79 (352)
T ss_dssp             -CCEEEEEEE---TTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTC
T ss_pred             ccCEEEEEEc---CCcEEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCC
Confidence            3499998876   34588999999999999999999999999999998874 332  13578999999999999999999


Q ss_pred             CCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccc
Q 021300           86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL  165 (314)
Q Consensus        86 ~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~  165 (314)
                      ++|++||||++.+.. +|+.|.+|++|.+|+|++..+.  +.    ....|+|+||+++++++++++|+++++++|+.+ 
T Consensus        80 ~~~~vGdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~--g~----~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-  151 (352)
T 1e3j_A           80 KHLKKGDRVAVEPGV-PCRRCQFCKEGKYNLCPDLTFC--AT----PPDDGNLARYYVHAADFCHKLPDNVSLEEGALL-  151 (352)
T ss_dssp             CSCCTTCEEEECCEE-CCSSSHHHHTTCGGGCTTCEET--TB----TTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH-
T ss_pred             CCCCCCCEEEEcCcC-CCCCChhhhCcCcccCCCCccc--Cc----CCCCccceeEEEeChHHeEECcCCCCHHHHHhh-
Confidence            999999999876654 8999999999999999986432  11    124799999999999999999999999998854 


Q ss_pred             hhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCC-H---HHH
Q 021300          166 CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-Q---DEM  241 (314)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~-~---~~~  241 (314)
                      .++.|||++++.. ++++|++|||+|+|++|++++|+|+.+|++|++++++++++ ++++++|++.++++.+ .   +.+
T Consensus       152 ~~~~ta~~al~~~-~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~~lGa~~~~~~~~~~~~~~~i  229 (352)
T 1e3j_A          152 EPLSVGVHACRRA-GVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRL-EVAKNCGADVTLVVDPAKEEESSI  229 (352)
T ss_dssp             HHHHHHHHHHHHH-TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHTTCSEEEECCTTTSCHHHH
T ss_pred             chHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHH-HHHHHhCCCEEEcCcccccHHHHH
Confidence            6788999999644 58999999999999999999999999999988888887766 5557899999988764 3   344


Q ss_pred             HHHc-----CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300          242 QAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       242 ~~~~-----~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~  301 (314)
                      .+.+     +++|++||++|....+..++++|+++|+++.+|....+.+++...++.+++++.++
T Consensus       230 ~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~  294 (352)
T 1e3j_A          230 IERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSV  294 (352)
T ss_dssp             HHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEEC
T ss_pred             HHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccHHHHHhcCcEEEEe
Confidence            4443     37999999999876689999999999999999986666778888888999998743

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=2.1e-48  Score=357.50  Aligned_cols=280  Identities=24%  Similarity=0.302  Sum_probs=237.9

Q ss_pred             ccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcC-CC--CCCCCCcccccccEEEEEeCCCC
Q 021300            9 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE-WG--NTIYPIVPGHEIVGVVTEVGSKV   85 (314)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~-~~--~~~~p~~~G~e~~G~V~~vG~~v   85 (314)
                      .+||++++..   ++.+++++++.|+|+++||||||+++|||++|++++.+. .+  ...+|.++|||++|+|+++|+++
T Consensus         6 ~~mka~~~~~---~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V   82 (356)
T 1pl8_A            6 PNNLSLVVHG---PGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSV   82 (356)
T ss_dssp             CCCEEEEEEE---TTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTC
T ss_pred             cCceEEEEec---CCcEEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCC
Confidence            4588888875   345889999999999999999999999999999988753 22  13578999999999999999999


Q ss_pred             CCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccc
Q 021300           86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL  165 (314)
Q Consensus        86 ~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~  165 (314)
                      ++|++||||++.+.. +|++|.+|++|.+|+|++..+.  |.    ....|+|+||+.+++++++++|+++++++|+.+ 
T Consensus        83 ~~~~vGdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~--g~----~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-  154 (356)
T 1pl8_A           83 KHLKPGDRVAIEPGA-PRENDEFCKMGRYNLSPSIFFC--AT----PPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-  154 (356)
T ss_dssp             CSCCTTCEEEECSEE-CSSCCHHHHTTCGGGCTTCEET--TB----TTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-
T ss_pred             CCCCCCCEEEEeccC-CCCCChHHHCcCcccCCCcccc--Cc----CCCCCccccEEEeehHHEEECcCCCCHHHHHhh-
Confidence            999999999877665 8999999999999999986432  11    124799999999999999999999999998754 


Q ss_pred             hhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCC---CHHH-
Q 021300          166 CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSR---DQDE-  240 (314)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~---~~~~-  240 (314)
                      .++.|||++++.. ++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++++|++.+++++   +.+. 
T Consensus       155 ~~~~ta~~al~~~-~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~lGa~~vi~~~~~~~~~~~  232 (356)
T 1pl8_A          155 EPLSVGIHACRRG-GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRL-SKAKEIGADLVLQISKESPQEIA  232 (356)
T ss_dssp             HHHHHHHHHHHHH-TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHTTCSEEEECSSCCHHHHH
T ss_pred             chHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHhCCCEEEcCcccccchHH
Confidence            6788999999654 48999999999999999999999999999 888888887766 555799999999887   3443 


Q ss_pred             --HHHHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300          241 --MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       241 --~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~  301 (314)
                        +.+.+ +++|++||++|....+..++++|+++|+++.+|....+..++...++.+++++.++
T Consensus       233 ~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~  296 (356)
T 1pl8_A          233 RKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGV  296 (356)
T ss_dssp             HHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEEC
T ss_pred             HHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEEe
Confidence              33333 47999999999876689999999999999999986666788888888899998743

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=1e-48  Score=358.36  Aligned_cols=280  Identities=28%  Similarity=0.510  Sum_probs=250.7

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      ||++++.. ..++.+++++.|.|+|+||||||||.++|||++|++++.|.++ .++|.++|||++|+|+++|+++++|++
T Consensus         1 MKA~v~~~-~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~-~~~p~i~GhE~aG~V~~vG~~V~~~~~   78 (348)
T 4eez_A            1 MKAAVVRH-NPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG-NKAGTVLGHEGIGIVKEIGADVSSLQV   78 (348)
T ss_dssp             CEEEEECS-SCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTC-CCTTCBCCSEEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEEc-CCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCC-CCCCcccceeEEEEEEEECceeeeccc
Confidence            78888765 4556789999999999999999999999999999999999876 478999999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  170 (314)
                      ||||++.+....|+.|.+|..+.++.|......       +....|+|+||+.++++.++++|+++++++|+++++++.|
T Consensus        79 GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~t  151 (348)
T 4eez_A           79 GDRVSVAWFFEGCGHCEYCVSGNETFCREVKNA-------GYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVT  151 (348)
T ss_dssp             TCEEEEESEEECCSSSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHH
T ss_pred             CCeEeecccccccCccccccCCccccccccccc-------ccccCCcceeeccccccceeecCCCCCHHHHhhcccceee
Confidence            999999999999999999999999999887553       3457899999999999999999999999999999999999


Q ss_pred             hhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHHcC
Q 021300          171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG  246 (314)
Q Consensus       171 a~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~~~~  246 (314)
                      +|++++... +++|++|||+|+|++|.+++|+++.+ |++|+++++++++. ++++++|++.++|+.+.+   .+.++++
T Consensus       152 a~~~l~~~~-~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~-~~~~~~Ga~~~i~~~~~~~~~~v~~~t~  229 (348)
T 4eez_A          152 TYKAIKVSG-VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKL-NLAKKIGADVTINSGDVNPVDEIKKITG  229 (348)
T ss_dssp             HHHHHHHHT-CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHH-HHHHHTTCSEEEEC-CCCHHHHHHHHTT
T ss_pred             EEeeecccC-CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHh-hhhhhcCCeEEEeCCCCCHHHHhhhhcC
Confidence            999998666 79999999999999999999999976 67999999888766 667899999999998754   4555555


Q ss_pred             --CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300          247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       247 --~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~  301 (314)
                        ++|.+++++++..++..++++++++|+++.+|.+.....++...++.+++++.++
T Consensus       230 g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~gs  286 (348)
T 4eez_A          230 GLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGS  286 (348)
T ss_dssp             SSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEEC
T ss_pred             CCCceEEEEeccCcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEEE
Confidence              6899999999988899999999999999999998888889999999999998843

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=4.2e-48  Score=354.04  Aligned_cols=277  Identities=21%  Similarity=0.295  Sum_probs=233.5

Q ss_pred             ccchhhhccCCCCccceeeeeecCC-CCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ||++++...+   .++++++|.|++ +||||||||+++|||++|++.+.+..+ ..+|+++|||++|+|+++|+++++++
T Consensus         1 MkAvv~~~~g---~l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~-~~~P~i~G~E~~G~V~~vG~~V~~~~   76 (346)
T 4a2c_A            1 MKSVVNDTDG---IVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA-HYYPITLGHEFSGYIDAVGSGVDDLH   76 (346)
T ss_dssp             CEEEEECSSS---CEEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS-SSSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             CCEEEEecCC---CEEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC-CCCCccccEEEEEEEEEECCCccccc
Confidence            8888886543   599999999985 799999999999999999998888655 47899999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||||++.+.. .|++|.+|..|.+++|.+..+.       |....|+|+||+++++++++++|+++++++||.++ .+.
T Consensus        77 ~GdrV~~~~~~-~~g~c~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~~~  147 (346)
T 4a2c_A           77 PGDAVACVPLL-PCFTCPECLKGFYSQCAKYDFI-------GSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE-PIT  147 (346)
T ss_dssp             TTCEEEECCEE-CCSCSHHHHTTCGGGCSSCEEB-------TTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH-HHH
T ss_pred             CCCeEEeeecc-CCCCcccccCCccccCCCcccc-------cCCCCcccccccccchheEEECCCCCCHHHHHhch-HHH
Confidence            99999876655 8999999999999999987543       45678999999999999999999999999998664 345


Q ss_pred             hhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHHcC
Q 021300          170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG  246 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~~~~  246 (314)
                      ++++++.. ..+++|++|||+|+|++|++++|+|+++|++++++++..+++.++++++|++.++|+++.+   ...++++
T Consensus       148 ~~~~~~~~-~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~  226 (346)
T 4a2c_A          148 VGLHAFHL-AQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRE  226 (346)
T ss_dssp             HHHHHHHH-TTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGG
T ss_pred             HHHHHHHH-hccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcc
Confidence            55555554 4589999999999999999999999999997655554444455778999999999988753   4444443


Q ss_pred             --CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcc---cchhhhhcCceeEeee
Q 021300          247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLE---LPAFSLLMGEEEDSWW  301 (314)
Q Consensus       247 --~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~---~~~~~~~~~~~~i~~~  301 (314)
                        ++|+++|++|...++..++++++++|+++.+|...++..   ++...++.|++++.++
T Consensus       227 ~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~  286 (346)
T 4a2c_A          227 LRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGS  286 (346)
T ss_dssp             GCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEEC
T ss_pred             cCCcccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEE
Confidence              799999999988889999999999999999998876543   4456678889998743

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.6e-48  Score=355.71  Aligned_cols=283  Identities=29%  Similarity=0.496  Sum_probs=245.2

Q ss_pred             CcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCC
Q 021300            7 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKV   85 (314)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v   85 (314)
                      +|++||++++...+.  .++++++|.|+|+++||||||.++|||++|++++.|.++. ..+|.++|||++|+|+++|+++
T Consensus         2 ~p~~mka~~~~~~g~--~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v   79 (347)
T 2hcy_A            2 IPETQKGVIFYESHG--KLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENV   79 (347)
T ss_dssp             CCSEEEEEEESSTTC--CCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTC
T ss_pred             CCcccEEEEEeCCCC--CCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCC
Confidence            467799999877543  3889999999999999999999999999999999887652 4679999999999999999999


Q ss_pred             CCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccc
Q 021300           86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL  165 (314)
Q Consensus        86 ~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~  165 (314)
                      ++|++||||++.+....|+.|.+|++|.+|+|++....       |....|+|+||+.++++.++++|+++++++|++++
T Consensus        80 ~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~  152 (347)
T 2hcy_A           80 KGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLS-------GYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPIL  152 (347)
T ss_dssp             CSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEB-------TTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGG
T ss_pred             CCCcCCCEEEEecCCCCCCCChhhhCCCcccCcccccc-------ccCCCCcceeEEEeccccEEECCCCCCHHHHHHHh
Confidence            99999999988776667999999999999999976432       23467999999999999999999999999999999


Q ss_pred             hhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCC-H---HH
Q 021300          166 CAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-Q---DE  240 (314)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~-~---~~  240 (314)
                      +++.|||+++.+. .+++|++|||+|+ |++|++++|+++..|++|+++++++++. +.++++|++.++|..+ .   +.
T Consensus       153 ~~~~ta~~~l~~~-~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~-~~~~~~g~~~~~d~~~~~~~~~~  230 (347)
T 2hcy_A          153 CAGITVYKALKSA-NLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE-ELFRSIGGEVFIDFTKEKDIVGA  230 (347)
T ss_dssp             THHHHHHHHHHTT-TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH-HHHHHTTCCEEEETTTCSCHHHH
T ss_pred             hhHHHHHHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH-HHHHHcCCceEEecCccHhHHHH
Confidence            9999999999876 5899999999998 9999999999999999999999887776 5557899998888653 2   33


Q ss_pred             HHHHcC-CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC-CCcccchhhhhcCceeEee
Q 021300          241 MQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       241 ~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~i~~  300 (314)
                      +.+..+ ++|++||++|....+..++++|+++|+++.+|... .+..++...++.+++++.+
T Consensus       231 ~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g  292 (347)
T 2hcy_A          231 VLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVG  292 (347)
T ss_dssp             HHHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEE
T ss_pred             HHHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEE
Confidence            444433 79999999998667899999999999999999876 3467788888889988874

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=2.4e-48  Score=355.37  Aligned_cols=280  Identities=24%  Similarity=0.311  Sum_probs=243.9

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ||++++...+.+..+++++++.|+|+++||||||+++|||++|++++.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus         1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFA   80 (343)
T ss_dssp             CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCC
T ss_pred             CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCC
Confidence            78888877666666888999999999999999999999999999999887653 36899999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||||++.+ ..+|+.|.+|++|.+|+|++....       |....|+|+||+.++++.++++|+++++++|+++++++.
T Consensus        81 vGdrV~~~~-~~~cg~c~~C~~g~~~~C~~~~~~-------G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~  152 (343)
T 2eih_A           81 PGDEVVINP-GLSCGRCERCLAGEDNLCPRYQIL-------GEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFL  152 (343)
T ss_dssp             TTCEEEECC-EECCSCSHHHHTTCGGGCTTCEET-------TTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHH
T ss_pred             CCCEEEECC-CCCcccchhhccCccccccccccc-------CcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHH
Confidence            999999877 458999999999999999986532       233579999999999999999999999999999999999


Q ss_pred             hhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHHc
Q 021300          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM  245 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~~~  245 (314)
                      |||+++.+..++++|++|||+|+ |++|++++|+++..|++|+++++++++.+.+ +++|++.++++.+.+   .+.+..
T Consensus       153 ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~-~~~ga~~~~d~~~~~~~~~~~~~~  231 (343)
T 2eih_A          153 TAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRA-KALGADETVNYTHPDWPKEVRRLT  231 (343)
T ss_dssp             HHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTCSEEEETTSTTHHHHHHHHT
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCCEEEcCCcccHHHHHHHHh
Confidence            99999987667899999999998 9999999999999999999999988777554 679999888877654   344444


Q ss_pred             C--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-cccchhhhhcCceeEee
Q 021300          246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGEEEDSW  300 (314)
Q Consensus       246 ~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~~~~~~~~~~~~~~i~~  300 (314)
                      +  ++|++||++| ...+..++++|+++|+++.+|...++ ..++...++.+++++.+
T Consensus       232 ~~~~~d~vi~~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g  288 (343)
T 2eih_A          232 GGKGADKVVDHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILG  288 (343)
T ss_dssp             TTTCEEEEEESSC-SSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEE
T ss_pred             CCCCceEEEECCC-HHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEE
Confidence            3  7999999999 45699999999999999999987654 35777788888888874

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=8.5e-49  Score=358.34  Aligned_cols=276  Identities=21%  Similarity=0.319  Sum_probs=237.8

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG---NTIYPIVPGHEIVGVVTEVGSKVSK   87 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~   87 (314)
                      ||++++...+++  ++++++|.|+|++|||||||.++|||++|++++.|.++   ...+|.++|||++|+|+++|+++++
T Consensus         1 Mka~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   78 (343)
T 2dq4_A            1 MRALAKLAPEEG--LTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRR   78 (343)
T ss_dssp             CEEEEECSSSSS--CEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCS
T ss_pred             CeEEEEeCCCCc--EEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCc
Confidence            778888765543  88899999999999999999999999999999888654   3468999999999999999999999


Q ss_pred             CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (314)
Q Consensus        88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~  167 (314)
                      |++||||++.+.. +|++|.+|++|++|+|++....       |....|+|+||+.+++++++++|+++++++|+.+ .+
T Consensus        79 ~~vGdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~  149 (343)
T 2dq4_A           79 PQVGDHVSLESHI-VCHACPACRTGNYHVCLNTQIL-------GVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-EP  149 (343)
T ss_dssp             SCTTCEEEECCEE-CCSCSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-HH
T ss_pred             CCCCCEEEECCCC-CCCCChhhhCcCcccCCCccee-------cCCCCCcceeEEEEchHHeEECCCCCCHHHHHhh-hH
Confidence            9999999877655 7999999999999999986532       2345799999999999999999999999999876 56


Q ss_pred             hhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHH
Q 021300          168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQA  243 (314)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~  243 (314)
                      +.|||+++.+..++ +|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++++ ++.++++.+.+   .+.+
T Consensus       150 ~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~-~~~~~l-a~~v~~~~~~~~~~~~~~  226 (343)
T 2dq4_A          150 FGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRL-AFARPY-ADRLVNPLEEDLLEVVRR  226 (343)
T ss_dssp             HHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHH-GGGTTT-CSEEECTTTSCHHHHHHH
T ss_pred             HHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHh-HHhccCcCccCHHHHHHH
Confidence            78999999745568 99999999999999999999999999 999999888776 445678 99999887643   3333


Q ss_pred             HcC-CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccch-hhhhcCceeEee
Q 021300          244 AMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA-FSLLMGEEEDSW  300 (314)
Q Consensus       244 ~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~-~~~~~~~~~i~~  300 (314)
                      +++ ++|++||++|....+..++++|+++|+++.+|...++..++. ..++.+++++.+
T Consensus       227 ~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g  285 (343)
T 2dq4_A          227 VTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFG  285 (343)
T ss_dssp             HHSSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEEE
T ss_pred             hcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEEE
Confidence            333 799999999986668999999999999999998766778888 788889888874

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.7e-48  Score=358.03  Aligned_cols=286  Identities=24%  Similarity=0.323  Sum_probs=241.9

Q ss_pred             CCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCC
Q 021300            6 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKV   85 (314)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   85 (314)
                      .+...||++++...+  +.++++++|.|+|+++||||||.++|||++|++++.|.++...+|.++|||++|+|+++| ++
T Consensus        13 ~~~~~mka~~~~~~g--~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~P~v~GhE~~G~V~~vG-~V   89 (380)
T 1vj0_A           13 MMGLKAHAMVLEKFN--QPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVN-GE   89 (380)
T ss_dssp             -CCEEEEEEEBCSTT--SCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEES-SC
T ss_pred             HhhhheEEEEEecCC--CCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCCCCCCcccCcCcEEEEEEeC-Cc
Confidence            456689999987754  468999999999999999999999999999999999876545789999999999999999 99


Q ss_pred             C------CCCCCCEEEecccccCCCCCcccc-CCCCCCCCcccccccccc---CCCCccCcccceEEee-cCCceEECCC
Q 021300           86 S------KFKVGDKVGVGCMVGSCRSCDSCA-IDLENYCPKVIMTYANKY---HDGTITYGGYSDIMVA-DEHFVVRIPE  154 (314)
Q Consensus        86 ~------~~~~Gd~V~~~~~~~~c~~c~~c~-~g~~~~c~~~~~~~~~~~---~~~~~~~g~~~~~~~v-~~~~~~~~p~  154 (314)
                      +      +|++||||++.+.. +|+.|.+|. +|++|+|++....  +..   .......|+|+||+++ +++.++++|+
T Consensus        90 ~~~~~~~~~~vGdrV~~~~~~-~cg~C~~C~~~g~~~~C~~~~~~--g~~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~  166 (380)
T 1vj0_A           90 KRDLNGELLKPGDLIVWNRGI-TCGECYWCKVSKEPYLCPNRKVY--GINRGCSEYPHLRGCYSSHIVLDPETDVLKVSE  166 (380)
T ss_dssp             CBCTTSCBCCTTCEEEECSEE-CCSSSHHHHTSCCGGGCTTCEET--TTTCCSSSTTCCCSSSBSEEEECTTCCEEEECT
T ss_pred             cccccCCCCCCCCEEEEcccC-CCCCCHHHhcCCCcccCCCccee--ccccccCCCCCCCccccceEEEcccceEEECCC
Confidence            9      89999999887765 799999999 9999999976431  100   0001347999999999 9999999999


Q ss_pred             CCCcc-cccccchhhhhhhhhhHhcCC-CCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCcE
Q 021300          155 GTPLD-ATAPLLCAGITVYSPLRFYGL-DKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADS  231 (314)
Q Consensus       155 ~~~~~-~aa~~~~~~~ta~~~l~~~~~-~~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~ga~~  231 (314)
                      +++++ +|+.+. ++.|||+++.. .+ +++|++|||+|+|++|++++|+|+.+| ++|++++++++++ ++++++|++.
T Consensus       167 ~l~~~~~Aa~~~-~~~ta~~al~~-~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~~~~lGa~~  243 (380)
T 1vj0_A          167 KDDLDVLAMAMC-SGATAYHAFDE-YPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRL-KLAEEIGADL  243 (380)
T ss_dssp             TSCHHHHHHHTT-HHHHHHHHHHT-CSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHH-HHHHHTTCSE
T ss_pred             CCChHHhHhhhc-HHHHHHHHHHh-cCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHH-HHHHHcCCcE
Confidence            99999 665555 89999999965 56 899999999999999999999999999 5999999988776 4557899999


Q ss_pred             EecCC---CHH---HHHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC-C-Ccccchhh-hhcCceeEee
Q 021300          232 FLVSR---DQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-K-PLELPAFS-LLMGEEEDSW  300 (314)
Q Consensus       232 ~v~~~---~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~-~~~~~~~~-~~~~~~~i~~  300 (314)
                      ++++.   +.+   .+.+.++  ++|++||++|....+..++++|+++|+++.+|... + +..++... ++.+++++.+
T Consensus       244 vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g  323 (380)
T 1vj0_A          244 TLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKG  323 (380)
T ss_dssp             EEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEE
T ss_pred             EEeccccCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCeEEEE
Confidence            99987   544   3444444  69999999998767999999999999999999876 5 67788887 8889988874

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=2.8e-48  Score=357.53  Aligned_cols=281  Identities=20%  Similarity=0.263  Sum_probs=236.4

Q ss_pred             CcccccchhhhccCCCCccceeeeeec--------CCCCCeEEEEEeeeccChhhhhhHhcCC-C--CCCCCCccccccc
Q 021300            7 QEHPKNAFGWAAKDTSGVLSPFHFSRR--------ATGEKDVTFKVTHCGICHSDLHMIKNEW-G--NTIYPIVPGHEIV   75 (314)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p--------~~~~~eVlVkv~a~~l~~~d~~~~~~~~-~--~~~~p~~~G~e~~   75 (314)
                      ++.+||++++.   +++.++++++|.|        +|++|||||||.++|||++|++++.+.. +  ..++|.++|||++
T Consensus         5 ~~~~mka~~~~---~~~~l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~   81 (363)
T 3m6i_A            5 ASKTNIGVFTN---PQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESA   81 (363)
T ss_dssp             CCSCCEEEEEC---TTCCEEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEE
T ss_pred             CcccceeEEEe---CCCcEEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceE
Confidence            56778888876   4556999999999        9999999999999999999999887432 2  2467999999999


Q ss_pred             EEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCC
Q 021300           76 GVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG  155 (314)
Q Consensus        76 G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~  155 (314)
                      |+|+++|+++++|++||||++.+.. +|++|.+|.+|.+|+|++..+..      .....|+|+||++++++.++++|+ 
T Consensus        82 G~V~~vG~~v~~~~vGdrV~~~~~~-~cg~C~~c~~g~~~~c~~~~~~g------~~~~~G~~aey~~v~~~~~~~iP~-  153 (363)
T 3m6i_A           82 GEVIAVHPSVKSIKVGDRVAIEPQV-ICNACEPCLTGRYNGCERVDFLS------TPPVPGLLRRYVNHPAVWCHKIGN-  153 (363)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECCEE-CCSCSHHHHTTCGGGCTTCEETT------STTSCCSCBSEEEEEGGGEEECTT-
T ss_pred             EEEEEECCCCCCCCCCCEEEEeccc-CCCCCHHHHCcCcccCCCccccC------CCCCCccceeEEEEehhhEEECCC-
Confidence            9999999999999999999877654 99999999999999999875431      113579999999999999999999 


Q ss_pred             CCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEec
Q 021300          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLV  234 (314)
Q Consensus       156 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~  234 (314)
                      +++++|+.+ .++.|||++++... +++|++|||+|+|++|++++|+||.+|++ |++++.+++++ ++++++ ++.+++
T Consensus       154 ~s~~~aa~~-~~~~ta~~~l~~~~-~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~l-~~~~~~  229 (363)
T 3m6i_A          154 MSYENGAML-EPLSVALAGLQRAG-VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRL-KFAKEI-CPEVVT  229 (363)
T ss_dssp             CCHHHHHHH-HHHHHHHHHHHHHT-CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHH-HHHHHH-CTTCEE
T ss_pred             CCHHHHHhh-hHHHHHHHHHHHcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHh-chhccc
Confidence            999999976 57889999996544 89999999999999999999999999997 88888887766 555677 644443


Q ss_pred             CC----C-HH---HHHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeeec
Q 021300          235 SR----D-QD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWWQ  302 (314)
Q Consensus       235 ~~----~-~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~~  302 (314)
                      +.    + .+   .+.+.++  ++|++||++|+...+..++++|+++|+++.+|...++..++...++.+++++.+..
T Consensus       230 ~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~  307 (363)
T 3m6i_A          230 HKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQY  307 (363)
T ss_dssp             EECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCEEEECC
T ss_pred             ccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcEEEEcc
Confidence            32    2 33   3444443  79999999999866899999999999999999987778889889999999987543

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=2.6e-47  Score=351.09  Aligned_cols=285  Identities=23%  Similarity=0.282  Sum_probs=242.0

Q ss_pred             CCCCCCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC-CCCCCCcccccccEEEEE
Q 021300            2 GQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTE   80 (314)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~   80 (314)
                      +....++.+||++++..+ +++.++++++|.|+|++|||||||.++|||++|++++.|.++ ..++|.++|||++|+|++
T Consensus        19 ~~~~~m~~~mkA~~~~~~-~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~   97 (363)
T 3uog_A           19 YFQSMMSKWMQEWSTETV-APHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEA   97 (363)
T ss_dssp             ----CCCSEEEEEEBSCT-TTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEE
T ss_pred             EEeccCchhhEEEEEccC-CCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEE
Confidence            334457788999999886 667799999999999999999999999999999999998776 357899999999999999


Q ss_pred             eCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCccc
Q 021300           81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDA  160 (314)
Q Consensus        81 vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~  160 (314)
                      +|+++++|++||||++.+.       .+|..|. +.|.+.....   ...|....|+|+||+.++++.++++|+++++++
T Consensus        98 vG~~v~~~~vGDrV~~~~~-------~~c~~g~-~~c~~~~~~~---~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~  166 (363)
T 3uog_A           98 VGKSVTRFRPGDRVISTFA-------PGWLDGL-RPGTGRTPAY---ETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAE  166 (363)
T ss_dssp             ECTTCCSCCTTCEEEECSS-------TTCCSSS-CCSCSSCCCC---CCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHH
T ss_pred             ECCCCCCCCCCCEEEEecc-------ccccccc-cccccccccc---cccCcCCCCcceeEEEechHHeEECCCCCCHHH
Confidence            9999999999999986542       2788899 9998532110   012345679999999999999999999999999


Q ss_pred             ccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH--
Q 021300          161 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ--  238 (314)
Q Consensus       161 aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~--  238 (314)
                      ||.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|++|+++++++++++ +++++|++.++++...  
T Consensus       167 aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~~lGa~~vi~~~~~~~  245 (363)
T 3uog_A          167 ASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLD-RAFALGADHGINRLEEDW  245 (363)
T ss_dssp             HHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHTCSEEEETTTSCH
T ss_pred             HhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHH-HHHHcCCCEEEcCCcccH
Confidence            9999999999999997777799999999999999999999999999999999999887774 4688999999985433  


Q ss_pred             -HHHHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEee
Q 021300          239 -DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       239 -~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~~  300 (314)
                       +.+.++++  ++|++||++|.. .+..++++++++|+++.+|...+ ...++...++.+++++.+
T Consensus       246 ~~~v~~~~~g~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g  310 (363)
T 3uog_A          246 VERVYALTGDRGADHILEIAGGA-GLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQG  310 (363)
T ss_dssp             HHHHHHHHTTCCEEEEEEETTSS-CHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEE
T ss_pred             HHHHHHHhCCCCceEEEECCChH-HHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEE
Confidence             34555554  799999999965 59999999999999999998765 378888888889999874

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=5.4e-48  Score=360.40  Aligned_cols=269  Identities=21%  Similarity=0.341  Sum_probs=232.1

Q ss_pred             ccceeeeeecC-CCCCeEEEEEeeeccChhhhhhHhcCC------C-CCCCCCcccccccEEEEEeCCCC------CCCC
Q 021300           24 VLSPFHFSRRA-TGEKDVTFKVTHCGICHSDLHMIKNEW------G-NTIYPIVPGHEIVGVVTEVGSKV------SKFK   89 (314)
Q Consensus        24 ~~~~~~~~~p~-~~~~eVlVkv~a~~l~~~d~~~~~~~~------~-~~~~p~~~G~e~~G~V~~vG~~v------~~~~   89 (314)
                      .++++++|.|+ |+++||||||.++|||++|++++.|..      + ..++|.++|||++|+|+++|+++      ++|+
T Consensus        41 ~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~  120 (404)
T 3ip1_A           41 EVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFE  120 (404)
T ss_dssp             EEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEECC
T ss_pred             ceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEECCCccccccCCCCC
Confidence            58899999999 999999999999999999999887642      1 23679999999999999999999      8899


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCc------ccccc
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPL------DATAP  163 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~------~~aa~  163 (314)
                      +||||++.+.. +|+.|.+|++|.+++|++....       |....|+|+||++++++.++++|+.+++      .++++
T Consensus       121 vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~~~~~aa~  192 (404)
T 3ip1_A          121 IGEPVCAEEML-WCGHCRPCAEGFPNHCENLNEL-------GFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGS  192 (404)
T ss_dssp             TTCEEEECSEE-CCSCSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGEEECGGGBTTBCTHHHHHHHH
T ss_pred             CCCEEEECCcc-CCCCCHHHHCcCcccCcccccc-------CCCCCCCCcceEEechHHeEeccccccccccccchhHHh
Confidence            99999887765 8999999999999999986542       3456899999999999999999998864      34788


Q ss_pred             cchhhhhhhhhhHhc-CCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHH--
Q 021300          164 LLCAGITVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD--  239 (314)
Q Consensus       164 ~~~~~~ta~~~l~~~-~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~--  239 (314)
                      ++.++.|||+++... .++++|++|||+|+|++|++++|+|+.+|+ +|++++.+++++ ++++++|++.++++.+.+  
T Consensus       193 l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~~~~lGa~~vi~~~~~~~~  271 (404)
T 3ip1_A          193 LVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRR-NLAKELGADHVIDPTKENFV  271 (404)
T ss_dssp             THHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHH-HHHHHHTCSEEECTTTSCHH
T ss_pred             hhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHcCCCEEEcCCCCCHH
Confidence            999999999999644 368999999999999999999999999999 788777777666 666899999999987654  


Q ss_pred             -HHHHHcC--CccEEEEccCCc-ccHHHHHHhh----ccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300          240 -EMQAAMG--TMDGIIDTVSAV-HPLMPLIGLL----KSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       240 -~~~~~~~--~~d~v~d~~g~~-~~~~~~~~~l----~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~  301 (314)
                       .+.++++  ++|++||++|+. ..+..++++|    +++|+++.+|...++..++...++.+++++.+.
T Consensus       272 ~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~  341 (404)
T 3ip1_A          272 EAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGS  341 (404)
T ss_dssp             HHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHHHTTCEEEEC
T ss_pred             HHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCcccHHHHhccceEEEEe
Confidence             4455554  699999999987 3467777777    999999999998888889999999999998843

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=9.2e-48  Score=352.67  Aligned_cols=279  Identities=19%  Similarity=0.270  Sum_probs=233.9

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhh-hHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLH-MIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~-~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ||++++...++   ++++++|.|+|++|||||||++++||++|++ ++.|.++ .++|.++|||++|+|+++|+++++|+
T Consensus         1 MkA~~~~~~~~---~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~p~v~G~E~~G~V~~vG~~v~~~~   76 (352)
T 3fpc_A            1 MKGFAMLSIGK---VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG-ERHNMILGHEAVGEVVEVGSEVKDFK   76 (352)
T ss_dssp             CEEEEEEETTE---EEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTC-CCSSEECCCEEEEEEEEECTTCCSCC
T ss_pred             CeEEEEccCCC---ceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCC-CCCCcccCCcceEEEEEECCCCCcCC
Confidence            78888876443   7889999999999999999999999999999 5577665 46799999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC--ceEECCCCCCcccccccchh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCA  167 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~  167 (314)
                      +||||++.+.. +|+.|.+|.+|+++.|......    +..+....|+|+||+.+++.  .++++|+++++++|+.++.+
T Consensus        77 vGdrV~~~~~~-~c~~c~~c~~g~~~~~~~~~~~----~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~  151 (352)
T 3fpc_A           77 PGDRVVVPAIT-PDWRTSEVQRGYHQHSGGMLAG----WKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDM  151 (352)
T ss_dssp             TTCEEEECSBC-CCSSSHHHHTTCGGGTTSTTTT----BCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTH
T ss_pred             CCCEEEEcccc-CCCCchhhcCCCcCCccccccc----cccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccch
Confidence            99999876655 8999999999999999765322    12234578999999999976  99999999999999999999


Q ss_pred             hhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHH
Q 021300          168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQA  243 (314)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~  243 (314)
                      +.|||++++. .++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++++|++.++++++.+   .+.+
T Consensus       152 ~~ta~~al~~-~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-~~~~~lGa~~vi~~~~~~~~~~v~~  229 (352)
T 3fpc_A          152 MTTGFHGAEL-ANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCC-DIALEYGATDIINYKNGDIVEQILK  229 (352)
T ss_dssp             HHHHHHHHHH-TTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHH-HHHHHHTCCEEECGGGSCHHHHHHH
T ss_pred             hHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH-HHHHHhCCceEEcCCCcCHHHHHHH
Confidence            9999999954 458999999999999999999999999999 788887777665 667899999999987654   4445


Q ss_pred             HcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhh----hhcCceeEee
Q 021300          244 AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFS----LLMGEEEDSW  300 (314)
Q Consensus       244 ~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~----~~~~~~~i~~  300 (314)
                      +++  ++|++||++|+...+..++++|+++|+++.+|...++..++...    +..+++++.+
T Consensus       230 ~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g  292 (352)
T 3fpc_A          230 ATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHG  292 (352)
T ss_dssp             HTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEE
T ss_pred             HcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEE
Confidence            554  69999999999767999999999999999999876544333322    2346666663

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=2.4e-47  Score=349.30  Aligned_cols=276  Identities=29%  Similarity=0.412  Sum_probs=238.7

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC--------CCCCCCcccccccEEEEEeC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG--------NTIYPIVPGHEIVGVVTEVG   82 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~--------~~~~p~~~G~e~~G~V~~vG   82 (314)
                      ||++++..++.  +++++++|.|+|+++||||||.++|||++|++++.|.++        ...+|.++|||++|+|+++|
T Consensus         1 Mka~~~~~~g~--~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   78 (347)
T 1jvb_A            1 MRAVRLVEIGK--PLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVG   78 (347)
T ss_dssp             CEEEEECSTTS--CCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEEC
T ss_pred             CeEEEEecCCC--CeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEEC
Confidence            67888776443  388899999999999999999999999999999887654        24689999999999999999


Q ss_pred             CCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecC-CceEECCCCCCcccc
Q 021300           83 SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADE-HFVVRIPEGTPLDAT  161 (314)
Q Consensus        83 ~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~-~~~~~~p~~~~~~~a  161 (314)
                      +++++|++||||+..+ ..+|++|.+|++|++|+|++....       |....|+|+||+.+++ +.++++ +++++++|
T Consensus        79 ~~v~~~~vGdrV~~~~-~~~Cg~C~~C~~g~~~~C~~~~~~-------G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~a  149 (347)
T 1jvb_A           79 DEVVGYSKGDLVAVNP-WQGEGNCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYMYKL-RRLNAVEA  149 (347)
T ss_dssp             TTCCSCCTTCEEEECC-EECCSSSHHHHTTCGGGCSSCEEB-------TTTBCCSSBSEEEESCGGGEEEC-SSSCHHHH
T ss_pred             CCCCCCCCCCEEEeCC-CCCCCCChhhhCcCcccCcccccc-------cccCCCcceeEEEecCccceEEe-CCCCHHHc
Confidence            9999999999996544 458999999999999999986432       2346799999999999 999999 99999999


Q ss_pred             cccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH
Q 021300          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQD  239 (314)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~  239 (314)
                      +++++++.|||+++.+ .++++|++|||+|+ |++|++++|+++.. |++|+++++++++.+.+ +++|++.++++.+.+
T Consensus       150 a~l~~~~~ta~~~l~~-~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~  227 (347)
T 1jvb_A          150 APLTCSGITTYRAVRK-ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRAGADYVINASMQD  227 (347)
T ss_dssp             GGGGTHHHHHHHHHHH-TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHHTCSEEEETTTSC
T ss_pred             ccchhhHHHHHHHHHh-cCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCEEecCCCcc
Confidence            9999999999999976 55899999999998 59999999999999 99999999888776544 789999988887654


Q ss_pred             H---HHHHc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC-CCcccchhhhhcCceeEee
Q 021300          240 E---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       240 ~---~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~i~~  300 (314)
                      .   +.++.  +++|++||++|....+..++++|+++|+++.+|... ++ .++...++.+++++.+
T Consensus       228 ~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g  293 (347)
T 1jvb_A          228 PLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVG  293 (347)
T ss_dssp             HHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEE
T ss_pred             HHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHhCceEEEE
Confidence            4   45555  479999999998866889999999999999999876 56 7888888888888874

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=5.8e-47  Score=348.01  Aligned_cols=275  Identities=19%  Similarity=0.213  Sum_probs=232.7

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCC---CCcccccccEEEEEeCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIY---PIVPGHEIVGVVTEVGSKVSK   87 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~---p~~~G~e~~G~V~~vG~~v~~   87 (314)
                      ||++++...++  .++++++|.|+|+++||||||.++|||++|++++.|.++...+   |.++|||++| |+++|++ ++
T Consensus         1 MkA~~~~~~~~--~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G-V~~vG~~-~~   76 (357)
T 2b5w_A            1 MKAIAVKRGED--RPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVG-VVVDPND-TE   76 (357)
T ss_dssp             CEEEEEETTCS--SCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTTSCTTCSEEECCSEEEE-EEEECTT-SS
T ss_pred             CeEEEEeCCCC--ceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCCCCCCCCCcccCceeEE-EEEECCC-CC
Confidence            67888766443  4889999999999999999999999999999999987654566   8999999999 9999999 99


Q ss_pred             CCCCCEEEecccccC--CCCCccccCCCCCCCCccccccccccCCCC-ccCcccceEEeecCCceEECCCCCCccccccc
Q 021300           88 FKVGDKVGVGCMVGS--CRSCDSCAIDLENYCPKVIMTYANKYHDGT-ITYGGYSDIMVADEHFVVRIPEGTPLDATAPL  164 (314)
Q Consensus        88 ~~~Gd~V~~~~~~~~--c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~  164 (314)
                      |++||||++.+.. .  |++|.+|++|++|+|++..+...     |. ...|+|+||++++++.++++|++++ ++ |++
T Consensus        77 ~~vGdrV~~~~~~-~~~cg~C~~C~~g~~~~C~~~~~~~~-----g~~~~~G~~aey~~v~~~~~~~iP~~~~-~~-aal  148 (357)
T 2b5w_A           77 LEEGDIVVPTVRR-PPASGTNEYFERDQPDMAPDGMYFER-----GIVGAHGYMSEFFTSPEKYLVRIPRSQA-EL-GFL  148 (357)
T ss_dssp             CCTTCEEEECSEE-CCTTCCCHHHHTTCGGGCCTTSCEEE-----TTBEECCSCBSEEEEEGGGEEECCGGGS-TT-GGG
T ss_pred             CCCCCEEEECCcC-CCCCCCChHHhCcCcccCCCCccccc-----CccCCCcceeeEEEEchHHeEECCCCcc-hh-hhh
Confidence            9999999876654 4  99999999999999998643210     11 3469999999999999999999999 55 558


Q ss_pred             chhhhhhhhhhHhcCCCCCC------CEEEEEcCChHHHHH-HHHH-HHCCCe-EEEEeCChh---hHHHHHHHcCCcEE
Q 021300          165 LCAGITVYSPLRFYGLDKPG------MHVGVVGLGGLGHVA-VKFA-KAMGVK-VTVISTSPS---KKSEAIERLGADSF  232 (314)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g------~~vlI~Gag~vG~~a-~~~a-~~~g~~-vi~v~~~~~---~~~~~~~~~ga~~~  232 (314)
                      +.++.|||++++.. ++++|      ++|||+|+|++|+++ +|+| +.+|++ |++++++++   ++ ++++++|++.+
T Consensus       149 ~~~~~ta~~al~~~-~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~-~~~~~lGa~~v  226 (357)
T 2b5w_A          149 IEPISITEKALEHA-YASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTI-DIIEELDATYV  226 (357)
T ss_dssp             HHHHHHHHHHHHHH-HHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHH-HHHHHTTCEEE
T ss_pred             hchHHHHHHHHHhc-CCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHH-HHHHHcCCccc
Confidence            88999999999654 47999      999999999999999 9999 999997 999988876   66 55589999998


Q ss_pred             ecCCCHHH--HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC-CCcccchhhh----hcCceeEee
Q 021300          233 LVSRDQDE--MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSL----LMGEEEDSW  300 (314)
Q Consensus       233 v~~~~~~~--~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~~~----~~~~~~i~~  300 (314)
                       ++++.+.  +.++.+++|++||++|....+..++++++++|+++.+|... .+..++...+    +.+++++.+
T Consensus       227 -~~~~~~~~~i~~~~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g  300 (357)
T 2b5w_A          227 -DSRQTPVEDVPDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVG  300 (357)
T ss_dssp             -ETTTSCGGGHHHHSCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEE
T ss_pred             -CCCccCHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEE
Confidence             8765432  44443479999999998766899999999999999999876 6677888777    788888874

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=2.3e-46  Score=348.76  Aligned_cols=281  Identities=21%  Similarity=0.256  Sum_probs=233.6

Q ss_pred             cccchhhhccCCCCccceeeeeecCC-CC-----CeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCC
Q 021300           10 PKNAFGWAAKDTSGVLSPFHFSRRAT-GE-----KDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGS   83 (314)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~p~~-~~-----~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~   83 (314)
                      +||++++...   +.++++++|.|+| ++     +||||||.++|||++|++++.|.++ ..+|.++|||++|+|+++|+
T Consensus         2 ~MkA~~~~~~---~~l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~-~~~p~v~GhE~~G~V~~vG~   77 (398)
T 2dph_A            2 GNKSVVYHGT---RDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI-VPKGHVLGHEITGEVVEKGS   77 (398)
T ss_dssp             CEEEEEEEET---TEEEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC-CCTTCBCCCCEEEEEEEECT
T ss_pred             ccEEEEEEcC---CCEEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC-CCCCcccCCceEEEEEEECC
Confidence            4899888753   4588999999998 68     9999999999999999999988653 46799999999999999999


Q ss_pred             CCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccc------cccccCCCCccCcccceEEeecCC--ceEECCCC
Q 021300           84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT------YANKYHDGTITYGGYSDIMVADEH--FVVRIPEG  155 (314)
Q Consensus        84 ~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~------~~~~~~~~~~~~g~~~~~~~v~~~--~~~~~p~~  155 (314)
                      ++++|++||||++.+.. +|+.|.+|++|++|+|++....      ..|. . .....|+|+||+++++.  .++++|++
T Consensus        78 ~v~~~~vGDrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~-~-~~~~~G~~aey~~v~~~~~~~~~iP~~  154 (398)
T 2dph_A           78 DVELMDIGDLVSVPFNV-ACGRCRNCKEARSDVCENNLVNPDADLGAFGF-D-LKGWSGGQAEYVLVPYADYMLLKFGDK  154 (398)
T ss_dssp             TCCSCCTTCEEECCSBC-CCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTT-T-BSSCCCSSBSEEEESSHHHHCEECSSH
T ss_pred             CCCCCCCCCEEEEcCCC-CCCCChhhhCcCcccCCCcccccccccccccc-c-cCCCCceeeeeEEeccccCeEEECCCC
Confidence            99999999999876655 8999999999999999872110      0110 0 01246999999999986  89999999


Q ss_pred             CCccc----ccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCc
Q 021300          156 TPLDA----TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGAD  230 (314)
Q Consensus       156 ~~~~~----aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~  230 (314)
                      +++++    ++.+++++.|||++++ ..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++++|++
T Consensus       155 ~~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~lGa~  232 (398)
T 2dph_A          155 EQAMEKIKDLTLISDILPTGFHGCV-SAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERL-KLLSDAGFE  232 (398)
T ss_dssp             HHHHHTHHHHTTTTTHHHHHHHHHH-HTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHH-HHHHTTTCE
T ss_pred             CChhhhcchhhhhcCHHHHHHHHHH-HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHHHcCCc
Confidence            99998    8889999999999995 4558999999999999999999999999999 899998888776 555789996


Q ss_pred             EEecCCCH----HHHHHHcC--CccEEEEccCCcc--------------cHHHHHHhhccCCEEEEEcCCC---------
Q 021300          231 SFLVSRDQ----DEMQAAMG--TMDGIIDTVSAVH--------------PLMPLIGLLKSQGKLVLVGAPE---------  281 (314)
Q Consensus       231 ~~v~~~~~----~~~~~~~~--~~d~v~d~~g~~~--------------~~~~~~~~l~~~G~~v~~G~~~---------  281 (314)
                       ++++.+.    +.+.++++  ++|++||++|...              .+..++++|+++|+++.+|...         
T Consensus       233 -~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~  311 (398)
T 2dph_A          233 -TIDLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNK  311 (398)
T ss_dssp             -EEETTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSCSSH
T ss_pred             -EEcCCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccccccccccccc
Confidence             7777653    34555554  6999999999763              5889999999999999999762         


Q ss_pred             ----CCcccchhhhhcCceeEee
Q 021300          282 ----KPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       282 ----~~~~~~~~~~~~~~~~i~~  300 (314)
                          .+..++...++.+++++.+
T Consensus       312 ~~~~~~~~~~~~~~~~k~~~i~g  334 (398)
T 2dph_A          312 DAGSGRLHLDFGKMWTKSIRIMT  334 (398)
T ss_dssp             HHHTTEEEEEHHHHHHTTCEEEC
T ss_pred             cccCCcccccHHHHhhcCCEEEE
Confidence                2346677777888888873

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.7e-45  Score=342.89  Aligned_cols=283  Identities=22%  Similarity=0.252  Sum_probs=230.8

Q ss_pred             cccchhhhccCCCCccceeeeeecCCC-CCe------EEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeC
Q 021300           10 PKNAFGWAAKDTSGVLSPFHFSRRATG-EKD------VTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVG   82 (314)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~e------VlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG   82 (314)
                      +||++++...   +.++++++|.|+|. ++|      |||||.++|||++|++++.|.++ ..+|.++|||++|+|+++|
T Consensus         2 ~Mka~~~~~~---~~l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~p~v~GhE~~G~V~~vG   77 (398)
T 1kol_A            2 GNRGVVYLGS---GKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKG   77 (398)
T ss_dssp             CEEEEEEEET---TEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEEC
T ss_pred             ccEEEEEecC---CceEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC-CCCCcccCcccEEEEEEEC
Confidence            4899888753   35889999999997 898      99999999999999999988654 3578999999999999999


Q ss_pred             CCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccc-cccCC--CCccCcccceEEeecCC--ceEECCCCCC
Q 021300           83 SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYHD--GTITYGGYSDIMVADEH--FVVRIPEGTP  157 (314)
Q Consensus        83 ~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~-~~~~~--~~~~~g~~~~~~~v~~~--~~~~~p~~~~  157 (314)
                      +++++|++||||++.+. .+|+.|.+|++|++|+|++...... +.+..  .....|+|+||+++++.  +++++|++++
T Consensus        78 ~~v~~~~vGDrV~~~~~-~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~~~  156 (398)
T 1kol_A           78 RDVENLQIGDLVSVPFN-VACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDK  156 (398)
T ss_dssp             TTCCSCCTTCEEECCSE-ECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHH
T ss_pred             CCCCcCCCCCEEEECCc-CCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCCCcc
Confidence            99999999999987654 4899999999999999987632110 00000  01246999999999986  8999999999


Q ss_pred             ccc----ccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEE
Q 021300          158 LDA----TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSF  232 (314)
Q Consensus       158 ~~~----aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~  232 (314)
                      +++    ++.+++++.|||+++.. .++++|++|||+|+|++|++++|+||.+|+ +|++++++++++ ++++++|++ +
T Consensus       157 ~~~~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~-~~a~~lGa~-~  233 (398)
T 1kol_A          157 AMEKIRDLTCLSDILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARL-AHAKAQGFE-I  233 (398)
T ss_dssp             HHHTHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHTTCE-E
T ss_pred             hhhhcccccccccHHHHHHHHHHH-cCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHH-HHHHHcCCc-E
Confidence            888    68899999999999974 558999999999999999999999999999 677877887766 555899997 6


Q ss_pred             ecCCCH----HHHHHHcC--CccEEEEccCCcc---------------cHHHHHHhhccCCEEEEEcCC-C-C-------
Q 021300          233 LVSRDQ----DEMQAAMG--TMDGIIDTVSAVH---------------PLMPLIGLLKSQGKLVLVGAP-E-K-------  282 (314)
Q Consensus       233 v~~~~~----~~~~~~~~--~~d~v~d~~g~~~---------------~~~~~~~~l~~~G~~v~~G~~-~-~-------  282 (314)
                      +++.+.    +.+.++++  ++|+|||++|...               .+..++++++++|+++.+|.. . .       
T Consensus       234 i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~  313 (398)
T 1kol_A          234 ADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAA  313 (398)
T ss_dssp             EETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHH
T ss_pred             EccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCcccccccc
Confidence            776542    34555554  6999999999762               588999999999999999975 2 1       


Q ss_pred             ----CcccchhhhhcCceeEee
Q 021300          283 ----PLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       283 ----~~~~~~~~~~~~~~~i~~  300 (314)
                          ...++...++.+++++.+
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~g  335 (398)
T 1kol_A          314 AKIGSLSIRFGLGWAKSHSFHT  335 (398)
T ss_dssp             HHTTCCCCCHHHHHHTTCEEEE
T ss_pred             cccccccccHHHHhhcccEEEe
Confidence                235566667777777763

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=5.1e-45  Score=345.35  Aligned_cols=284  Identities=19%  Similarity=0.223  Sum_probs=240.0

Q ss_pred             CCcccccchhhhccC-------------CCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhc-------------
Q 021300            6 EQEHPKNAFGWAAKD-------------TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKN-------------   59 (314)
Q Consensus         6 ~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~-------------   59 (314)
                      ..|++||++++...+             .++.++++++|.|+|++|||||||.++|||++|++...+             
T Consensus        26 ~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g  105 (456)
T 3krt_A           26 PLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYG  105 (456)
T ss_dssp             CCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHH
T ss_pred             CCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhcc
Confidence            478899999998751             135688999999999999999999999999999876432             


Q ss_pred             CCC----CCCCC-CcccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCC-c
Q 021300           60 EWG----NTIYP-IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT-I  133 (314)
Q Consensus        60 ~~~----~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~-~  133 (314)
                      ..+    ...+| .++|||++|+|+++|+++++|++||||++.+.  .|..|..|..+.++.|++....       |. .
T Consensus       106 ~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~--~c~~~~~~~~~~~~~c~~~~~~-------G~~~  176 (456)
T 3krt_A          106 RVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL--SVELESSDGHNDTMLDPEQRIW-------GFET  176 (456)
T ss_dssp             TSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE--ECCCCSGGGTTSGGGCTTCEET-------TTTS
T ss_pred             ccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC--cccccccccccccccCcccccc-------ccCC
Confidence            111    12567 69999999999999999999999999987553  6888999999999999886542       12 2


Q ss_pred             cCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhc--CCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeE
Q 021300          134 TYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFY--GLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKV  210 (314)
Q Consensus       134 ~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~v  210 (314)
                      ..|+|+||+++++++++++|+++++++|+.+++++.|||+++...  .++++|++|||+|+ |++|++++|+|+..|+++
T Consensus       177 ~~G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~v  256 (456)
T 3krt_A          177 NFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANP  256 (456)
T ss_dssp             SSCSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred             CCCcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeE
Confidence            359999999999999999999999999999999999999999654  56899999999998 999999999999999999


Q ss_pred             EEEeCChhhHHHHHHHcCCcEEecCCCH--------------------HHHHHHcC--CccEEEEccCCcccHHHHHHhh
Q 021300          211 TVISTSPSKKSEAIERLGADSFLVSRDQ--------------------DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLL  268 (314)
Q Consensus       211 i~v~~~~~~~~~~~~~~ga~~~v~~~~~--------------------~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l  268 (314)
                      +++++++++. ++++++|++.++++.+.                    +.+.++++  ++|+|||++|+. .+..+++++
T Consensus       257 i~~~~~~~~~-~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~-~~~~~~~~l  334 (456)
T 3krt_A          257 ICVVSSPQKA-EICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRE-TFGASVFVT  334 (456)
T ss_dssp             EEEESSHHHH-HHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHH-HHHHHHHHE
T ss_pred             EEEECCHHHH-HHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCch-hHHHHHHHh
Confidence            9999877766 55588999999988663                    34555554  799999999985 599999999


Q ss_pred             ccCCEEEEEcCCCC-CcccchhhhhcCceeEee
Q 021300          269 KSQGKLVLVGAPEK-PLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       269 ~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~~  300 (314)
                      +++|+++.+|.+.+ ...++...++.+.+++.+
T Consensus       335 ~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g  367 (456)
T 3krt_A          335 RKGGTITTCASTSGYMHEYDNRYLWMSLKRIIG  367 (456)
T ss_dssp             EEEEEEEESCCTTCSEEEEEHHHHHHTTCEEEE
T ss_pred             hCCcEEEEEecCCCcccccCHHHHHhcCeEEEE
Confidence            99999999998765 467888888888888874

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=1.2e-44  Score=332.15  Aligned_cols=260  Identities=22%  Similarity=0.231  Sum_probs=229.1

Q ss_pred             CCCCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCC-CCCCcccccccEEEEEeC
Q 021300            4 APEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNT-IYPIVPGHEIVGVVTEVG   82 (314)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~-~~p~~~G~e~~G~V~~vG   82 (314)
                      .+.+|.+||++++..+++++.+++++.+.|+|++|||||||.++|||++|++.+.|.++.. .+|.++|||++|+|+++|
T Consensus        22 ~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG  101 (353)
T 4dup_A           22 SMSLPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVG  101 (353)
T ss_dssp             -CCCCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEEC
T ss_pred             cCCCChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEEC
Confidence            4568889999999998888889999999999999999999999999999999999877643 579999999999999999


Q ss_pred             CCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCccccc
Q 021300           83 SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATA  162 (314)
Q Consensus        83 ~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa  162 (314)
                      +++++|++||||+..                                   ...|+|+||+.++++.++++|+++++++||
T Consensus       102 ~~v~~~~vGdrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa  146 (353)
T 4dup_A          102 PGVSGYAVGDKVCGL-----------------------------------ANGGAYAEYCLLPAGQILPFPKGYDAVKAA  146 (353)
T ss_dssp             TTCCSCCTTCEEEEE-----------------------------------CSSCCSBSEEEEEGGGEEECCTTCCHHHHH
T ss_pred             CCCCCCCCCCEEEEe-----------------------------------cCCCceeeEEEEcHHHcEeCCCCCCHHHHh
Confidence            999999999999742                                   256999999999999999999999999999


Q ss_pred             ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH-
Q 021300          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE-  240 (314)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~-  240 (314)
                      ++++++.|||+++.+..++++|++|||+|+ |++|++++|+++..|++|+++++++++.+ .++++|++.++++.+.+. 
T Consensus       147 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~lGa~~~~~~~~~~~~  225 (353)
T 4dup_A          147 ALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCE-ACERLGAKRGINYRSEDFA  225 (353)
T ss_dssp             TSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHTCSEEEETTTSCHH
T ss_pred             hhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHhcCCCEEEeCCchHHH
Confidence            999999999999977777999999999965 99999999999999999999999988774 457899999998877543 


Q ss_pred             --HHHHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-cc-cchhhhhcCceeEee
Q 021300          241 --MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LE-LPAFSLLMGEEEDSW  300 (314)
Q Consensus       241 --~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~~-~~~~~~~~~~~~i~~  300 (314)
                        +.+.+ +++|++||++|.. .+..++++|+++|+++.+|...+. .. ++...++.+++++.+
T Consensus       226 ~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g  289 (353)
T 4dup_A          226 AVIKAETGQGVDIILDMIGAA-YFERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTG  289 (353)
T ss_dssp             HHHHHHHSSCEEEEEESCCGG-GHHHHHHTEEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEE
T ss_pred             HHHHHHhCCCceEEEECCCHH-HHHHHHHHhccCCEEEEEEecCCCcccCCCHHHHHhcCceEEE
Confidence              33333 3799999999987 489999999999999999987653 33 788888889998874

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=2.8e-44  Score=327.27  Aligned_cols=254  Identities=19%  Similarity=0.200  Sum_probs=227.2

Q ss_pred             CcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCC
Q 021300            7 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS   86 (314)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   86 (314)
                      +|++||++++..++++..+++++++.|+|++|||||||+++|||++|++++.|.++ .++|.++|||++|+|+++|++++
T Consensus         5 ~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~P~i~G~e~~G~V~~vG~~v~   83 (334)
T 3qwb_A            5 IPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP-CEKPYVLGREASGTVVAKGKGVT   83 (334)
T ss_dssp             CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC-CCSSEECCSEEEEEEEEECTTCC
T ss_pred             CchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC-CCCCCccccceEEEEEEECCCCC
Confidence            78889999999887778899999999999999999999999999999999998776 46899999999999999999999


Q ss_pred             CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeec-CCceEECCCCCCccc---cc
Q 021300           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVAD-EHFVVRIPEGTPLDA---TA  162 (314)
Q Consensus        87 ~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~-~~~~~~~p~~~~~~~---aa  162 (314)
                      +|++||||++                                    ...|+|+||+.++ .+.++++|+++++++   ++
T Consensus        84 ~~~~GdrV~~------------------------------------~~~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa  127 (334)
T 3qwb_A           84 NFEVGDQVAY------------------------------------ISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYA  127 (334)
T ss_dssp             SCCTTCEEEE------------------------------------ECSSCSBSEEEEETTSSEEECCTTCCHHHHHHHH
T ss_pred             CCCCCCEEEE------------------------------------eeCCcceEEEEecCcceEEECCCCCCHHHhhhhh
Confidence            9999999974                                    2369999999999 999999999999999   88


Q ss_pred             ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH-
Q 021300          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE-  240 (314)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~-  240 (314)
                      ++++...|||+++.+..++++|++|||+|+ |++|++++|+++..|++|+++++++++++ +++++|++.++++.+.+. 
T Consensus       128 ~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~ga~~~~~~~~~~~~  206 (334)
T 3qwb_A          128 AGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK-IAKEYGAEYLINASKEDIL  206 (334)
T ss_dssp             HHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHTTCSEEEETTTSCHH
T ss_pred             hhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCcEEEeCCCchHH
Confidence            889999999999988877999999999995 99999999999999999999999887775 668899999999877543 


Q ss_pred             --HHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-cccchhhhhcCceeEe
Q 021300          241 --MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGEEEDS  299 (314)
Q Consensus       241 --~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~~~~~~~~~~~~~~i~  299 (314)
                        +.+.++  ++|++||++|.. .+..++++|+++|+++.+|...++ ..++...+..+++++.
T Consensus       207 ~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~  269 (334)
T 3qwb_A          207 RQVLKFTNGKGVDASFDSVGKD-TFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLV  269 (334)
T ss_dssp             HHHHHHTTTSCEEEEEECCGGG-GHHHHHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEE
T ss_pred             HHHHHHhCCCCceEEEECCChH-HHHHHHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEE
Confidence              444443  699999999985 599999999999999999987654 4788888888888887

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=2.6e-44  Score=328.49  Aligned_cols=257  Identities=24%  Similarity=0.328  Sum_probs=219.7

Q ss_pred             CCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCC
Q 021300            6 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSK   84 (314)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~   84 (314)
                      .+|.+||++++..++++..+++++++.|+|++|||||||.++|||++|++++.|.++. ..+|.++|||++|+|+++|++
T Consensus        17 ~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~   96 (342)
T 4eye_A           17 QGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPEG   96 (342)
T ss_dssp             -CCCEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECCTT
T ss_pred             cCCcceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEECCC
Confidence            4678899999998888888999999999999999999999999999999999987753 478999999999999999999


Q ss_pred             CCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCccccccc
Q 021300           85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPL  164 (314)
Q Consensus        85 v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~  164 (314)
                      ++ |++||||+..                                   ...|+|+||+.++++.++++|+++++++|+++
T Consensus        97 v~-~~vGDrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  140 (342)
T 4eye_A           97 SG-IKPGDRVMAF-----------------------------------NFIGGYAERVAVAPSNILPTPPQLDDAEAVAL  140 (342)
T ss_dssp             SS-CCTTCEEEEE-----------------------------------CSSCCSBSEEEECGGGEEECCTTSCHHHHHHH
T ss_pred             CC-CCCCCEEEEe-----------------------------------cCCCcceEEEEEcHHHeEECCCCCCHHHHHHh
Confidence            99 9999999742                                   24699999999999999999999999999999


Q ss_pred             chhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCC--HHHH
Q 021300          165 LCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD--QDEM  241 (314)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~--~~~~  241 (314)
                      ++++.|||+++.+..++++|++|||+|+ |++|++++|+++..|++|++++++++++ ++++++|++.++++.+  .+.+
T Consensus       141 ~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~~ga~~v~~~~~~~~~~v  219 (342)
T 4eye_A          141 IANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAAT-EFVKSVGADIVLPLEEGWAKAV  219 (342)
T ss_dssp             TTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHTCSEEEESSTTHHHHH
T ss_pred             hhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHhcCCcEEecCchhHHHHH
Confidence            9999999999977777999999999998 9999999999999999999999988877 4557899999998872  1334


Q ss_pred             HHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-cccchhhhhcCceeEee
Q 021300          242 QAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGEEEDSW  300 (314)
Q Consensus       242 ~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~~~~~~~~~~~~~~i~~  300 (314)
                      .+.++  ++|++||++|.. .+..++++++++|+++.+|...++ ..++...++.+++++.+
T Consensus       220 ~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g  280 (342)
T 4eye_A          220 REATGGAGVDMVVDPIGGP-AFDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIG  280 (342)
T ss_dssp             HHHTTTSCEEEEEESCC---CHHHHHHTEEEEEEEEEC----------CCCCGGGTTCEEEE
T ss_pred             HHHhCCCCceEEEECCchh-HHHHHHHhhcCCCEEEEEEccCCCCCccCHHHHhhcCCEEEE
Confidence            44444  699999999987 499999999999999999987643 57777888889999874

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=1e-44  Score=334.19  Aligned_cols=274  Identities=20%  Similarity=0.270  Sum_probs=225.9

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCC-CeEEEEEeeeccChhhhhhHhc--CCCCCCC---CCcccccccEEEEEeCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGE-KDVTFKVTHCGICHSDLHMIKN--EWGNTIY---PIVPGHEIVGVVTEVGSK   84 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~-~eVlVkv~a~~l~~~d~~~~~~--~~~~~~~---p~~~G~e~~G~V~~vG~~   84 (314)
                      ||++++..+++  .++++++|.|+|++ +||||||.++|||++|++++.|  .++...+   |.++|||++|+|++  ++
T Consensus         1 MkA~~~~~~g~--~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~--~~   76 (366)
T 2cdc_A            1 MKAIIVKPPNA--GVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEE--SY   76 (366)
T ss_dssp             CEEEEECTTSC--CCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC-------CCSCEECCSEEEEEECS--CC
T ss_pred             CeEEEEeCCCC--ceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCCCcCCCCCcCCcceEEEEEe--CC
Confidence            78888876554  38889999999999 9999999999999999999988  5543456   99999999999999  77


Q ss_pred             CCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCc-cCcccceEEeecCCceEECCCCCCcccccc
Q 021300           85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI-TYGGYSDIMVADEHFVVRIPEGTPLDATAP  163 (314)
Q Consensus        85 v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~-~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~  163 (314)
                       ++|++||||++.+.. +|++|.+|++|++|+|++......     +.. ..|+|+||++++++.++++|++++ ++|+ 
T Consensus        77 -~~~~~GDrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~~~-----g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~Aa-  147 (366)
T 2cdc_A           77 -HGFSQGDLVMPVNRR-GCGICRNCLVGRPDFCETGEFGEA-----GIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGI-  147 (366)
T ss_dssp             -SSCCTTCEEEECSEE-CCSSSHHHHTTCGGGCSSSCCEEE-----TTBEECCSCBSEEEECGGGEEEECGGGT-TTGG-
T ss_pred             -CCCCCCCEEEEcCCC-CCCCChhhhCcCcccCCCCCcccC-----CccCCCCceeEEEEechHHeEECcCCcc-hhhh-
Confidence             889999999877655 899999999999999987643200     112 469999999999999999999999 7764 


Q ss_pred             cchhhhhhhhhhH--h--cCCCC--C-------CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh---hhHHHHHHHc
Q 021300          164 LLCAGITVYSPLR--F--YGLDK--P-------GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERL  227 (314)
Q Consensus       164 ~~~~~~ta~~~l~--~--~~~~~--~-------g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~---~~~~~~~~~~  227 (314)
                      ++.++.|||+++.  .  ..+++  +       |++|||+|+|++|++++|+++..|++|+++++++   ++. ++++++
T Consensus       148 l~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~~~~  226 (366)
T 2cdc_A          148 LAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQ-TVIEET  226 (366)
T ss_dssp             GHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHH-HHHHHH
T ss_pred             hcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHH-HHHHHh
Confidence            7889999999997  3  44578  8       9999999999999999999999999999999887   665 566789


Q ss_pred             CCcEEecCCC--HHHHHHHcCCccEEEEccCCcccH-HHHHHhhccCCEEEEEcCCCCC-cccchhh---hhcCceeEee
Q 021300          228 GADSFLVSRD--QDEMQAAMGTMDGIIDTVSAVHPL-MPLIGLLKSQGKLVLVGAPEKP-LELPAFS---LLMGEEEDSW  300 (314)
Q Consensus       228 ga~~~v~~~~--~~~~~~~~~~~d~v~d~~g~~~~~-~~~~~~l~~~G~~v~~G~~~~~-~~~~~~~---~~~~~~~i~~  300 (314)
                      |++.+ + .+  .+.+.+..+++|++||++|....+ ..++++|+++|+++.+|...++ ..++...   ++.+++++.+
T Consensus       227 ga~~v-~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g  304 (366)
T 2cdc_A          227 KTNYY-N-SSNGYDKLKDSVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIG  304 (366)
T ss_dssp             TCEEE-E-CTTCSHHHHHHHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHHTTCEEEE
T ss_pred             CCcee-c-hHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHHHhcCcEEEE
Confidence            99987 7 54  123333225899999999987667 8999999999999999987654 6777777   8888888874

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=3.6e-44  Score=338.86  Aligned_cols=284  Identities=20%  Similarity=0.169  Sum_probs=234.7

Q ss_pred             CCcccccchhhhccC-----------CCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHh----------------
Q 021300            6 EQEHPKNAFGWAAKD-----------TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIK----------------   58 (314)
Q Consensus         6 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~----------------   58 (314)
                      .+|++||++++...+           .++.++++++|.|+|++|||||||.++|||++|++...                
T Consensus        20 ~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~~   99 (447)
T 4a0s_A           20 PVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQ   99 (447)
T ss_dssp             CCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHTT
T ss_pred             CCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhccc
Confidence            478899999998865           12468899999999999999999999999999975421                


Q ss_pred             cCCC-CCCCC-CcccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCc-cC
Q 021300           59 NEWG-NTIYP-IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI-TY  135 (314)
Q Consensus        59 ~~~~-~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~-~~  135 (314)
                      +.+. ...+| .++|||++|+|+++|+++++|++||||++.+.. .|+.|. |..+.++.|.+....       |.. ..
T Consensus       100 g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~-~~~~~~-~~~~~~~~c~~~~~~-------G~~~~~  170 (447)
T 4a0s_A          100 GGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAH-VDEQEP-ATHGDGMLGTEQRAW-------GFETNF  170 (447)
T ss_dssp             CGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEE-CCTTSG-GGGTCTTCSTTCEET-------TTTSSS
T ss_pred             CccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCc-CcCccc-ccccccccccccccc-------cccCCC
Confidence            1111 12456 699999999999999999999999999877654 677665 556889999886542       222 35


Q ss_pred             cccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhc--CCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEE
Q 021300          136 GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFY--GLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTV  212 (314)
Q Consensus       136 g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~  212 (314)
                      |+|+||+++++++++++|+++++++|+.+++++.|||+++...  .++++|++|||+|+ |++|++++|+++..|+++++
T Consensus       171 G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~  250 (447)
T 4a0s_A          171 GGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVA  250 (447)
T ss_dssp             CSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE
T ss_pred             CceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEE
Confidence            9999999999999999999999999999999999999999643  66899999999998 99999999999999999999


Q ss_pred             EeCChhhHHHHHHHcCCcEEecCCCH---------------------HHHHHHcC-CccEEEEccCCcccHHHHHHhhcc
Q 021300          213 ISTSPSKKSEAIERLGADSFLVSRDQ---------------------DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKS  270 (314)
Q Consensus       213 v~~~~~~~~~~~~~~ga~~~v~~~~~---------------------~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~  270 (314)
                      +++++++++ +++++|++.++++.+.                     +.+.+.++ ++|++||++|.. .+..+++++++
T Consensus       251 ~~~~~~~~~-~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~-~~~~~~~~l~~  328 (447)
T 4a0s_A          251 VVSSAQKEA-AVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRV-TFGLSVIVARR  328 (447)
T ss_dssp             EESSHHHHH-HHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHH-HHHHHHHHSCT
T ss_pred             EeCCHHHHH-HHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCch-HHHHHHHHHhc
Confidence            998877764 5588999988875432                     23444444 799999999986 58999999999


Q ss_pred             CCEEEEEcCCCC-CcccchhhhhcCceeEee
Q 021300          271 QGKLVLVGAPEK-PLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       271 ~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~~  300 (314)
                      +|+++.+|...+ ...++...++.+++++.+
T Consensus       329 ~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g  359 (447)
T 4a0s_A          329 GGTVVTCGSSSGYLHTFDNRYLWMKLKKIVG  359 (447)
T ss_dssp             TCEEEESCCTTCSEEEEEHHHHHHTTCEEEE
T ss_pred             CCEEEEEecCCCcccccCHHHHHhCCCEEEe
Confidence            999999998765 467788888888888874

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=6.2e-44  Score=323.78  Aligned_cols=253  Identities=25%  Similarity=0.334  Sum_probs=224.2

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      ||++++..++++..+++++.+.|+|++|||||||+++|||++|++++.|.++.+++|.++|||++|+|+++|+++++|++
T Consensus         2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~   81 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFKV   81 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            89999999888888999999999999999999999999999999999998876688999999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  170 (314)
                      ||||+...                                  ...|+|+||+.++++.++++|+++++++|+++++...|
T Consensus        82 GdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~t  127 (325)
T 3jyn_A           82 GDRVAYGT----------------------------------GPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLT  127 (325)
T ss_dssp             TCEEEESS----------------------------------SSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCEEEEec----------------------------------CCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHH
Confidence            99997421                                  24699999999999999999999999999999999999


Q ss_pred             hhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHHcC
Q 021300          171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG  246 (314)
Q Consensus       171 a~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~~~~  246 (314)
                      +|+++.+..++++|++|||+|+ |++|++++|+++..|++|+++++++++.+ +++++|++.++++.+.+   .+.+.++
T Consensus       128 a~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~Ga~~~~~~~~~~~~~~~~~~~~  206 (325)
T 3jyn_A          128 VQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAA-HAKALGAWETIDYSHEDVAKRVLELTD  206 (325)
T ss_dssp             HHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHHHHTCSEEEETTTSCHHHHHHHHTT
T ss_pred             HHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCCEEEeCCCccHHHHHHHHhC
Confidence            9999988888999999999995 99999999999999999999999887774 55789999999987754   3444444


Q ss_pred             --CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCc-ccchhhhhcC-ceeEe
Q 021300          247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMG-EEEDS  299 (314)
Q Consensus       247 --~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~-~~~~~~~~~~-~~~i~  299 (314)
                        ++|++||++|.. .+..++++++++|+++.+|...++. .++...+..+ .+.+.
T Consensus       207 ~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~  262 (325)
T 3jyn_A          207 GKKCPVVYDGVGQD-TWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVT  262 (325)
T ss_dssp             TCCEEEEEESSCGG-GHHHHHTTEEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEEE
T ss_pred             CCCceEEEECCChH-HHHHHHHHhcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEEE
Confidence              699999999985 5999999999999999999877653 6777777766 45554

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=2.3e-43  Score=324.66  Aligned_cols=257  Identities=20%  Similarity=0.268  Sum_probs=221.7

Q ss_pred             cccccchhhhcc---CCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCC
Q 021300            8 EHPKNAFGWAAK---DTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSK   84 (314)
Q Consensus         8 ~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (314)
                      +++||++++..+   +++..++++++|.|+|++|||||||.++|||++|++++.|.++...+|.++|||++|+|+++|++
T Consensus        20 m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~   99 (363)
T 4dvj_A           20 FQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVGPD   99 (363)
T ss_dssp             CCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEEEEEEECTT
T ss_pred             hheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEEEEEEeCCC
Confidence            457999999887   56788999999999999999999999999999999999998776688999999999999999999


Q ss_pred             CCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCccccccc
Q 021300           85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPL  164 (314)
Q Consensus        85 v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~  164 (314)
                      +++|++||||+...                                +....|+|+||++++++.++++|+++++++||.+
T Consensus       100 v~~~~vGdrV~~~~--------------------------------~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  147 (363)
T 4dvj_A          100 VTLFRPGDEVFYAG--------------------------------SIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAAL  147 (363)
T ss_dssp             CCSCCTTCEEEECC--------------------------------CTTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTS
T ss_pred             CCCCCCCCEEEEcc--------------------------------CCCCCccceEEEEeCHHHeeECCCCCCHHHHHhh
Confidence            99999999997421                                1235799999999999999999999999999999


Q ss_pred             chhhhhhhhhhHhcCCCC-----CCCEEEEEc-CChHHHHHHHHHHH-CCCeEEEEeCChhhHHHHHHHcCCcEEecCCC
Q 021300          165 LCAGITVYSPLRFYGLDK-----PGMHVGVVG-LGGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAIERLGADSFLVSRD  237 (314)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~-----~g~~vlI~G-ag~vG~~a~~~a~~-~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~  237 (314)
                      ++++.|||+++.+..+++     +|++|||+| +|++|++++|+|+. .|++|++++++++++ ++++++|++.++++.+
T Consensus       148 ~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~-~~~~~lGad~vi~~~~  226 (363)
T 4dvj_A          148 PLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQ-EWVKSLGAHHVIDHSK  226 (363)
T ss_dssp             HHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHH-HHHHHTTCSEEECTTS
T ss_pred             hhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHH-HHHHHcCCCEEEeCCC
Confidence            999999999997777777     899999999 49999999999998 588999999888776 5557899999999875


Q ss_pred             H--HHHHHHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          238 Q--DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       238 ~--~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                      .  +.+.+.. +++|++||++|+...+..++++|+++|+++.+|.   +..++...+..+++++.+
T Consensus       227 ~~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~---~~~~~~~~~~~k~~~i~~  289 (363)
T 4dvj_A          227 PLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDD---PSAFDIMLFKRKAVSIHH  289 (363)
T ss_dssp             CHHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSC---CSSCCGGGGTTTTCEEEE
T ss_pred             CHHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCCCEEEEECC---CCccchHHHhhccceEEE
Confidence            2  2333333 2799999999987668999999999999999965   346777888888888874

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=8.4e-44  Score=326.00  Aligned_cols=263  Identities=17%  Similarity=0.220  Sum_probs=221.5

Q ss_pred             CCCCCCCcccccchhhh--cc-CCCCccceeee---------eecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCC
Q 021300            1 MGQAPEQEHPKNAFGWA--AK-DTSGVLSPFHF---------SRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYP   67 (314)
Q Consensus         1 m~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~---------~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p   67 (314)
                      |++ +.+|.+||++++.  .+ +.++.++++++         +.|+|++|||||||+++|||++|++++.|.++. .++|
T Consensus         2 Ms~-m~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p   80 (349)
T 3pi7_A            2 MSP-MTIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKG   80 (349)
T ss_dssp             ----CCCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTT
T ss_pred             CCC-CCCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCC
Confidence            564 5678889999998  55 35677888888         999999999999999999999999999987753 3689


Q ss_pred             CcccccccEEEEEeCCCC-CCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecC
Q 021300           68 IVPGHEIVGVVTEVGSKV-SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADE  146 (314)
Q Consensus        68 ~~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~  146 (314)
                      .++|||++|+|+++|+++ ++|++||||++..                                +....|+|+||+.+++
T Consensus        81 ~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~--------------------------------g~~~~G~~aey~~v~~  128 (349)
T 3pi7_A           81 RPAGFEGVGTIVAGGDEPYAKSLVGKRVAFAT--------------------------------GLSNWGSWAEYAVAEA  128 (349)
T ss_dssp             SBCCSEEEEEEEEECSSHHHHHHTTCEEEEEC--------------------------------TTSSCCSSBSEEEEEG
T ss_pred             CCccceEEEEEEEECCCccCCCCCCCEEEEec--------------------------------cCCCCccceeeEeech
Confidence            999999999999999999 9999999998532                                2346799999999999


Q ss_pred             CceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCC-CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHH
Q 021300          147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG-MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI  224 (314)
Q Consensus       147 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g-~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~  224 (314)
                      +.++++|+++++++||++++...|||.+++...  ++| +++||+|+ |++|++++|+|+..|++|+++++++++++. +
T Consensus       129 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~--~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~-~  205 (349)
T 3pi7_A          129 AACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVK--QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIAL-L  205 (349)
T ss_dssp             GGEEECCTTCCC--GGGSSHHHHHHHHHHHHHH--HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHH-H
T ss_pred             HHeEECCCCCCHHHHhhccccHHHHHHHHHHHh--hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H
Confidence            999999999999999999999999997776555  666 68888854 999999999999999999999998887754 4


Q ss_pred             HHcCCcEEecCCCHHH---HHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC-CCcccch-hhhhcCcee
Q 021300          225 ERLGADSFLVSRDQDE---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPA-FSLLMGEEE  297 (314)
Q Consensus       225 ~~~ga~~~v~~~~~~~---~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~-~~~~~~~~~  297 (314)
                      +++|++.++++++.+.   +.+.++  ++|++||++|... +..++++|+++|+++.+|... .+..++. ..++.++++
T Consensus       206 ~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  284 (349)
T 3pi7_A          206 KDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTGPL-ASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKH  284 (349)
T ss_dssp             HHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCHHH-HHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCE
T ss_pred             HHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCChh-HHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccE
Confidence            7899999999877544   334433  7999999999886 789999999999999999755 4567887 888889999


Q ss_pred             Eee
Q 021300          298 DSW  300 (314)
Q Consensus       298 i~~  300 (314)
                      +.+
T Consensus       285 i~g  287 (349)
T 3pi7_A          285 IEG  287 (349)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            874

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=8.1e-43  Score=319.08  Aligned_cols=254  Identities=21%  Similarity=0.270  Sum_probs=219.9

Q ss_pred             cccchhhhccC---CCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCC
Q 021300           10 PKNAFGWAAKD---TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS   86 (314)
Q Consensus        10 ~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   86 (314)
                      +||++++..++   +++.+++.++|.|+|++|||||||++++||++|++.+.|.  ...+|.++|||++|+|+++|++++
T Consensus         2 ~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~~~p~i~G~e~~G~V~~vG~~v~   79 (346)
T 3fbg_A            2 SLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD--VSKAPRVLGFDAIGVVESVGNEVT   79 (346)
T ss_dssp             CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC--CSSSCBCCCCCEEEEEEEECTTCC
T ss_pred             CcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC--CCCCCcCcCCccEEEEEEeCCCCC
Confidence            49999999876   6788999999999999999999999999999999988876  357899999999999999999999


Q ss_pred             CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccch
Q 021300           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC  166 (314)
Q Consensus        87 ~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~  166 (314)
                      +|++||||+...                                .....|+|+||++++++.++++|+++++++|+.+++
T Consensus        80 ~~~~GdrV~~~~--------------------------------~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~  127 (346)
T 3fbg_A           80 MFNQGDIVYYSG--------------------------------SPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPL  127 (346)
T ss_dssp             SCCTTCEEEECC--------------------------------CTTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHH
T ss_pred             cCCCCCEEEEcC--------------------------------CCCCCcceeEEEEEChHHeEECCCCCCHHHhhhcch
Confidence            999999997421                                123579999999999999999999999999999999


Q ss_pred             hhhhhhhhhHhcCCCC------CCCEEEEEc-CChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH-
Q 021300          167 AGITVYSPLRFYGLDK------PGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-  238 (314)
Q Consensus       167 ~~~ta~~~l~~~~~~~------~g~~vlI~G-ag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~-  238 (314)
                      ++.|||+++....+++      +|++|||+| +|++|++++|+++.+|++|+++++++++. ++++++|++.++++++. 
T Consensus       128 ~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~~lGa~~vi~~~~~~  206 (346)
T 3fbg_A          128 TGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETI-EWTKKMGADIVLNHKESL  206 (346)
T ss_dssp             HHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHH-HHHHHHTCSEEECTTSCH
T ss_pred             hHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHhcCCcEEEECCccH
Confidence            9999999998777788      999999996 59999999999999999999998888776 55578999999988752 


Q ss_pred             -HHHHHHcC-CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          239 -DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       239 -~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                       +.+.+..+ ++|++|||+|+...+..++++|+++|+++.+|...  ..++...+..+++++.+
T Consensus       207 ~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~~--~~~~~~~~~~~~~~~~~  268 (346)
T 3fbg_A          207 LNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFE--NDQDLNALKPKSLSFSH  268 (346)
T ss_dssp             HHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCCS--SCBCGGGGTTTTCEEEE
T ss_pred             HHHHHHhCCCCccEEEECCCchHHHHHHHHHhccCCEEEEECCCC--CCCccccccccceEEEE
Confidence             33444433 79999999998776799999999999999998643  45666777778888774

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=3.8e-44  Score=323.79  Aligned_cols=230  Identities=18%  Similarity=0.268  Sum_probs=197.8

Q ss_pred             cccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      +||++++..  .++.+++++++.|+|++|||||||.+++||++|++++.|.++..++|.++|||++|+|+++|+++++|+
T Consensus         4 tMka~~~~~--~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   81 (315)
T 3goh_A            4 QHQVWAYQT--KTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSKM   81 (315)
T ss_dssp             EEEEEEEET--TTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCCCTTCCCCSEEEEEEEEECTTSCGGG
T ss_pred             ceEEEEEeC--CCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcCCCCCEeeeeeEEEEEEeCCCCCCCC
Confidence            599999875  566799999999999999999999999999999999999887678899999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||||+..+                                +....|+|+||+.++++.++++|+++++++||++++++.
T Consensus        82 vGdrV~~~~--------------------------------~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  129 (315)
T 3goh_A           82 LGRRVAYHT--------------------------------SLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLL  129 (315)
T ss_dssp             TTCEEEEEC--------------------------------CTTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHH
T ss_pred             CCCEEEEeC--------------------------------CCCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHH
Confidence            999998533                                223579999999999999999999999999999999999


Q ss_pred             hhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCcc
Q 021300          170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD  249 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d  249 (314)
                      |||+++ +..++++|++|||+|+|++|++++|+|+.+|++|++++ +++++ ++++++|++.+++  +   ..++.+++|
T Consensus       130 ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~-~~~~~lGa~~v~~--d---~~~v~~g~D  201 (315)
T 3goh_A          130 TAWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQ-ALAAKRGVRHLYR--E---PSQVTQKYF  201 (315)
T ss_dssp             HHHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCH-HHHHHHTEEEEES--S---GGGCCSCEE
T ss_pred             HHHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhH-HHHHHcCCCEEEc--C---HHHhCCCcc
Confidence            999999 66678999999999999999999999999999999988 66666 5558899999884  2   233355899


Q ss_pred             EEEEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300          250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       250 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      ++||++|+.. +..++++|+++|+++.+|....
T Consensus       202 vv~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~  233 (315)
T 3goh_A          202 AIFDAVNSQN-AAALVPSLKANGHIICIQDRIP  233 (315)
T ss_dssp             EEECC--------TTGGGEEEEEEEEEECCC--
T ss_pred             EEEECCCchh-HHHHHHHhcCCCEEEEEeCCCC
Confidence            9999999886 6889999999999999987543

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=1.5e-43  Score=325.20  Aligned_cols=260  Identities=23%  Similarity=0.296  Sum_probs=219.7

Q ss_pred             CCcccccchhhhccCCC-CccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCC
Q 021300            6 EQEHPKNAFGWAAKDTS-GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGS   83 (314)
Q Consensus         6 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~   83 (314)
                      .+|.+||++++...+.+ ..+++++.+.|+|+++||||||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+
T Consensus        22 ~m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~  101 (357)
T 1zsy_A           22 SMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGS  101 (357)
T ss_dssp             CCCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEEECT
T ss_pred             hCchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEEeCC
Confidence            46778999998876554 23778899999999999999999999999999999987654 35799999999999999999


Q ss_pred             CCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccc
Q 021300           84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAP  163 (314)
Q Consensus        84 ~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~  163 (314)
                      ++++|++||||+..+                                  ...|+|+||++++++.++++|+++++++|+.
T Consensus       102 ~v~~~~vGdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~  147 (357)
T 1zsy_A          102 NVTGLKPGDWVIPAN----------------------------------AGLGTWRTEAVFSEEALIQVPSDIPLQSAAT  147 (357)
T ss_dssp             TCCSCCTTCEEEESS----------------------------------SCSCCSBSEEEEEGGGEEEECSSSCHHHHHH
T ss_pred             CCCCCCCCCEEEEcC----------------------------------CCCccceeEEecCHHHcEECCCCCCHHHHhh
Confidence            999999999997522                                  1359999999999999999999999999999


Q ss_pred             cchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh---hHHHHHHHcCCcEEecCCCH-
Q 021300          164 LLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGADSFLVSRDQ-  238 (314)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~---~~~~~~~~~ga~~~v~~~~~-  238 (314)
                      +++.+.|||+++.+..++++|++|||+|+ |++|++++|+||.+|++++++++..+   ++.++++++|++.++++++. 
T Consensus       148 l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~  227 (357)
T 1zsy_A          148 LGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELR  227 (357)
T ss_dssp             TTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHH
T ss_pred             hcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcch
Confidence            99889999999988777999999999998 99999999999999999988886543   23466789999999886542 


Q ss_pred             -HHHHHHcC---CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC-CCcccchhhhhcCceeEee
Q 021300          239 -DEMQAAMG---TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       239 -~~~~~~~~---~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~i~~  300 (314)
                       +.+.+..+   ++|++||++|+.. +..++++++++|+++.+|... .+..++...++.+++++.+
T Consensus       228 ~~~~~~~~~~~~~~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g  293 (357)
T 1zsy_A          228 RPEMKNFFKDMPQPRLALNCVGGKS-STELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRG  293 (357)
T ss_dssp             SGGGGGTTSSSCCCSEEEESSCHHH-HHHHHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEE
T ss_pred             HHHHHHHHhCCCCceEEEECCCcHH-HHHHHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEE
Confidence             22333332   5999999999876 567999999999999998654 4567888888888888874

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=6.4e-43  Score=320.71  Aligned_cols=258  Identities=22%  Similarity=0.244  Sum_probs=222.6

Q ss_pred             CCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCC
Q 021300            6 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSK   84 (314)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~   84 (314)
                      ..+.+||++++..++.+..+++++++.|+|+++||||||.++|||++|++++.|.++. +.+|.++|||++|+|+++|++
T Consensus        18 ~~~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~~   97 (354)
T 2j8z_A           18 LYFQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPG   97 (354)
T ss_dssp             ---CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECSC
T ss_pred             cchhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECCC
Confidence            4677899999988776777889999999999999999999999999999999887653 357899999999999999999


Q ss_pred             C-CCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccc
Q 021300           85 V-SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAP  163 (314)
Q Consensus        85 v-~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~  163 (314)
                      + ++|++||||+..                                   ...|+|+||+.++++.++++|+++++++||+
T Consensus        98 v~~~~~vGdrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~iP~~ls~~~aa~  142 (354)
T 2j8z_A           98 CQGHWKIGDTAMAL-----------------------------------LPGGGQAQYVTVPEGLLMPIPEGLTLTQAAA  142 (354)
T ss_dssp             C--CCCTTCEEEEE-----------------------------------CSSCCSBSEEEEEGGGEEECCTTCCHHHHTT
T ss_pred             cCCCCCCCCEEEEe-----------------------------------cCCCcceeEEEeCHHHcEECCCCCCHHHHHh
Confidence            9 999999999742                                   2458999999999999999999999999999


Q ss_pred             cchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH--
Q 021300          164 LLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE--  240 (314)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~--  240 (314)
                      +++++.|||+++.+..++++|++|||+|+ |++|++++|+++..|++|+++++++++.+.+ +++|++.++++.+.+.  
T Consensus       143 l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~  221 (354)
T 2j8z_A          143 IPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLGAAAGFNYKKEDFSE  221 (354)
T ss_dssp             SHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTCSEEEETTTSCHHH
T ss_pred             ccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEecCChHHHH
Confidence            99999999999976677899999999995 9999999999999999999999998777555 7899999888876543  


Q ss_pred             -HHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-Ccccch-hhhhcCceeEee
Q 021300          241 -MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPA-FSLLMGEEEDSW  300 (314)
Q Consensus       241 -~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~-~~~~~~~~~i~~  300 (314)
                       +.+..+  ++|++||++|.. .+..++++|+++|+++.+|...+ ...++. ..++.+++++.+
T Consensus       222 ~~~~~~~~~~~d~vi~~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g  285 (354)
T 2j8z_A          222 ATLKFTKGAGVNLILDCIGGS-YWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLIT  285 (354)
T ss_dssp             HHHHHTTTSCEEEEEESSCGG-GHHHHHHHEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEE
T ss_pred             HHHHHhcCCCceEEEECCCch-HHHHHHHhccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEE
Confidence             334443  699999999987 58999999999999999998764 357777 778888888874

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=8.2e-43  Score=321.89  Aligned_cols=261  Identities=16%  Similarity=0.147  Sum_probs=213.5

Q ss_pred             CCCCcccccchhhhccCCCCcccee-eeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeC
Q 021300            4 APEQEHPKNAFGWAAKDTSGVLSPF-HFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVG   82 (314)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG   82 (314)
                      ++.+|.+||++++...   +.++++ +++.|+|++|||||||.+++||++|++++.+   ...+|.++|||++|+|+++|
T Consensus         5 tm~~p~~mkA~v~~~~---~~l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g---~~~~p~v~G~e~~G~V~~vG   78 (371)
T 3gqv_A            5 PFIPPPQQTALTVNDH---DEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQ---FATPWAFLGTDYAGTVVAVG   78 (371)
T ss_dssp             CCCCCSCEEEEEECTT---SCEEEEEEECCCCCCTTSEEEEEEEEECCGGGGC--------CCTTSCCCSEEEEEEEEEC
T ss_pred             CCCCchhceeEEEcCC---CceEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhc---CCCCCccCccccEEEEEEeC
Confidence            5567888999998754   458998 9999999999999999999999999988765   24578999999999999999


Q ss_pred             CCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCccccc
Q 021300           83 SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATA  162 (314)
Q Consensus        83 ~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa  162 (314)
                      +++++|++||||+.        .|.+|..|                   ....|+|+||++++.+.++++|+++++++|+
T Consensus        79 ~~v~~~~~GdrV~~--------~~~~~~~~-------------------~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa  131 (371)
T 3gqv_A           79 SDVTHIQVGDRVYG--------AQNEMCPR-------------------TPDQGAFSQYTVTRGRVWAKIPKGLSFEQAA  131 (371)
T ss_dssp             TTCCSCCTTCEEEE--------ECCTTCTT-------------------CTTCCSSBSEEECCTTCEEECCTTCCHHHHH
T ss_pred             CCCCCCCCCCEEEE--------eccCCCCC-------------------CCCCCcCcCeEEEchhheEECCCCCCHHHHh
Confidence            99999999999953        34455443                   1357999999999999999999999999999


Q ss_pred             ccchhhhhhhhhhHhc-CCC-----------CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC
Q 021300          163 PLLCAGITVYSPLRFY-GLD-----------KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA  229 (314)
Q Consensus       163 ~~~~~~~ta~~~l~~~-~~~-----------~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga  229 (314)
                      .+++++.|||+++.+. .++           ++|++|||+|+ |++|++++|+|+.+|++|+++. +++++ ++++++|+
T Consensus       132 ~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~-~~~~~lGa  209 (371)
T 3gqv_A          132 ALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNF-DLAKSRGA  209 (371)
T ss_dssp             TSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGH-HHHHHTTC
T ss_pred             hhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHH-HHHHHcCC
Confidence            9999999999999766 432           89999999998 9999999999999999998886 55555 67789999


Q ss_pred             cEEecCCCHHH---HHHHcC-CccEEEEccCCcccHHHHHHhh-ccCCEEEEEcCCCC----C--cccc---hhhhhcCc
Q 021300          230 DSFLVSRDQDE---MQAAMG-TMDGIIDTVSAVHPLMPLIGLL-KSQGKLVLVGAPEK----P--LELP---AFSLLMGE  295 (314)
Q Consensus       230 ~~~v~~~~~~~---~~~~~~-~~d~v~d~~g~~~~~~~~~~~l-~~~G~~v~~G~~~~----~--~~~~---~~~~~~~~  295 (314)
                      +.++|+++.+.   +.++++ ++|++||++|+...+..++++| +++|+++.+|..+.    .  ...+   ...++.++
T Consensus       210 ~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~  289 (371)
T 3gqv_A          210 EEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEG  289 (371)
T ss_dssp             SEEEETTSTTHHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSC
T ss_pred             cEEEECCCchHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeecccc
Confidence            99999987653   444443 6999999999977799999999 59999999996543    1  2211   23456667


Q ss_pred             eeEe
Q 021300          296 EEDS  299 (314)
Q Consensus       296 ~~i~  299 (314)
                      +++.
T Consensus       290 ~~~~  293 (371)
T 3gqv_A          290 STWP  293 (371)
T ss_dssp             BSCS
T ss_pred             cccc
Confidence            7765

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.2e-42  Score=318.57  Aligned_cols=256  Identities=24%  Similarity=0.371  Sum_probs=222.7

Q ss_pred             cccccchhhhccCCCCccce-eeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC-CCCCCCcccccccEEEEEeCCCC
Q 021300            8 EHPKNAFGWAAKDTSGVLSP-FHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKV   85 (314)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v   85 (314)
                      +..||++++..++.+..+++ ++++.|+|+++||||||.++|||++|++++.|.++ ...+|.++|||++|+|+++|+++
T Consensus        27 ~~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v  106 (351)
T 1yb5_A           27 QKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNA  106 (351)
T ss_dssp             -CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTC
T ss_pred             cceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCCC
Confidence            45699999988777777888 79999999999999999999999999999988764 24689999999999999999999


Q ss_pred             CCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccc
Q 021300           86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL  165 (314)
Q Consensus        86 ~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~  165 (314)
                      ++|++||||+...                                  ...|+|+||++++++.++++|+++++++||+++
T Consensus       107 ~~~~vGdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~  152 (351)
T 1yb5_A          107 SAFKKGDRVFTSS----------------------------------TISGGYAEYALAADHTVYKLPEKLDFKQGAAIG  152 (351)
T ss_dssp             TTCCTTCEEEESC----------------------------------CSSCSSBSEEEEEGGGEEECCTTSCHHHHTTTH
T ss_pred             CCCCCCCEEEEeC----------------------------------CCCCcceeEEEECHHHeEECCCCCCHHHHHhhh
Confidence            9999999997421                                  135999999999999999999999999999999


Q ss_pred             hhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---H
Q 021300          166 CAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---M  241 (314)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~  241 (314)
                      +++.|||+++.+..++++|++|||+|+ |++|++++|+++..|++|+++++++++.+ +++++|++.++++.+.+.   +
T Consensus       153 ~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~ga~~~~d~~~~~~~~~~  231 (351)
T 1yb5_A          153 IPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK-IVLQNGAHEVFNHREVNYIDKI  231 (351)
T ss_dssp             HHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHTTCSEEEETTSTTHHHHH
T ss_pred             hHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH-HHHHcCCCEEEeCCCchHHHHH
Confidence            999999999987777999999999997 99999999999999999999999887775 567899999888876543   3


Q ss_pred             HHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          242 QAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       242 ~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                      .+..+  ++|++||++|.. .+..++++++++|+++.+|.. ++..++...++.+++++.+
T Consensus       232 ~~~~~~~~~D~vi~~~G~~-~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~~~~~~i~g  290 (351)
T 1yb5_A          232 KKYVGEKGIDIIIEMLANV-NLSKDLSLLSHGGRVIVVGSR-GTIEINPRDTMAKESSIIG  290 (351)
T ss_dssp             HHHHCTTCEEEEEESCHHH-HHHHHHHHEEEEEEEEECCCC-SCEEECTHHHHTTTCEEEE
T ss_pred             HHHcCCCCcEEEEECCChH-HHHHHHHhccCCCEEEEEecC-CCCccCHHHHHhCCcEEEE
Confidence            33333  799999999986 488999999999999999974 4456777778888888874

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=2.6e-43  Score=319.19  Aligned_cols=255  Identities=21%  Similarity=0.198  Sum_probs=216.4

Q ss_pred             ccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCC-----CCCCCCCcccccccEEEEEeCC
Q 021300            9 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW-----GNTIYPIVPGHEIVGVVTEVGS   83 (314)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~-----~~~~~p~~~G~e~~G~V~~vG~   83 (314)
                      .+||++++..++++..+++++.+.|+|++|||||||.++|||++|++++.|..     ....+|.++|||++|+|+++|+
T Consensus         5 ~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG~   84 (321)
T 3tqh_A            5 KEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGS   84 (321)
T ss_dssp             CEEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEECT
T ss_pred             ccceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeCC
Confidence            46999999988888889999999999999999999999999999999888731     2357899999999999999999


Q ss_pred             CCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccc
Q 021300           84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAP  163 (314)
Q Consensus        84 ~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~  163 (314)
                      ++++|++||||+..+..                               ....|+|+||+.++++.++++|+++++++|+.
T Consensus        85 ~v~~~~~GdrV~~~~~~-------------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~  133 (321)
T 3tqh_A           85 DVNNVNIGDKVMGIAGF-------------------------------PDHPCCYAEYVCASPDTIIQKLEKLSFLQAAS  133 (321)
T ss_dssp             TCCSCCTTCEEEEECST-------------------------------TTCCCCSBSEEEECGGGEEECCTTSCHHHHHH
T ss_pred             CCCCCCCCCEEEEccCC-------------------------------CCCCCcceEEEEecHHHhccCCCCCCHHHHhh
Confidence            99999999999753310                               12469999999999999999999999999999


Q ss_pred             cchhhhhhhhhhHhcCCCCCCCEEEEEc-CChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHH
Q 021300          164 LLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ  242 (314)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~vlI~G-ag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~  242 (314)
                      +++++.|||+++ +..++++|++|||+| +|++|++++|+|+.+|++|+++++ +++ .++++++|++.++++++.+...
T Consensus       134 l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~-~~~-~~~~~~lGa~~~i~~~~~~~~~  210 (321)
T 3tqh_A          134 LPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS-KRN-HAFLKALGAEQCINYHEEDFLL  210 (321)
T ss_dssp             SHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEEC-HHH-HHHHHHHTCSEEEETTTSCHHH
T ss_pred             hhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEec-cch-HHHHHHcCCCEEEeCCCcchhh
Confidence            999999999999 456689999999997 599999999999999999988864 444 5777899999999998877444


Q ss_pred             HHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          243 AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       243 ~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                      +...++|++||++|+.. +..++++++++|+++.+|....+.  ....+..+++++.+
T Consensus       211 ~~~~g~D~v~d~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~--~~~~~~~~~~~~~~  265 (321)
T 3tqh_A          211 AISTPVDAVIDLVGGDV-GIQSIDCLKETGCIVSVPTITAGR--VIEVAKQKHRRAFG  265 (321)
T ss_dssp             HCCSCEEEEEESSCHHH-HHHHGGGEEEEEEEEECCSTTHHH--HHHHHHHTTCEEEC
T ss_pred             hhccCCCEEEECCCcHH-HHHHHHhccCCCEEEEeCCCCchh--hhhhhhhcceEEEE
Confidence            55578999999999886 699999999999999998754322  12234556666664

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=5.2e-43  Score=319.63  Aligned_cols=237  Identities=18%  Similarity=0.213  Sum_probs=210.6

Q ss_pred             ccccchhhhccCCC-CccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCC
Q 021300            9 HPKNAFGWAAKDTS-GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVS   86 (314)
Q Consensus         9 ~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~   86 (314)
                      .+||++++..+++| +.++++++|.|+|++|||||||+++|||++|++++.|.++. .++|.++|||++|+|+++|++++
T Consensus         3 ~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~   82 (340)
T 3gms_A            3 LHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFVS   82 (340)
T ss_dssp             CEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTTSC
T ss_pred             cccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCCCC
Confidence            46999999988776 56889999999999999999999999999999999987764 47899999999999999999999


Q ss_pred             CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccch
Q 021300           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC  166 (314)
Q Consensus        87 ~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~  166 (314)
                      +|++||||+.                                   ....|+|+||++++++.++++|+++++++|+++++
T Consensus        83 ~~~vGdrV~~-----------------------------------~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~  127 (340)
T 3gms_A           83 RELIGKRVLP-----------------------------------LRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYI  127 (340)
T ss_dssp             GGGTTCEEEE-----------------------------------CSSSCSSBSEEEEEGGGEEECCTTSCHHHHTTSSH
T ss_pred             CCCCCCEEEe-----------------------------------cCCCccceeEEEcCHHHeEECCCCCCHHHHhhhcc
Confidence            9999999973                                   23579999999999999999999999999999999


Q ss_pred             hhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHH
Q 021300          167 AGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQ  242 (314)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~  242 (314)
                      ...|||+++.+..++++|++|||+|+ |++|++++|+++..|++|+++++++++.+ +++++|++.++++.+.+   .+.
T Consensus       128 ~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~lga~~~~~~~~~~~~~~~~  206 (340)
T 3gms_A          128 NPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTE-ELLRLGAAYVIDTSTAPLYETVM  206 (340)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHH-HHHHHTCSEEEETTTSCHHHHHH
T ss_pred             hHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHhCCCcEEEeCCcccHHHHHH
Confidence            99999999987778999999999998 69999999999999999999999888774 45789999999887754   344


Q ss_pred             HHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300          243 AAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       243 ~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      +.++  ++|++||++|... +...+++|+++|+++.+|...+
T Consensus       207 ~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~  247 (340)
T 3gms_A          207 ELTNGIGADAAIDSIGGPD-GNELAFSLRPNGHFLTIGLLSG  247 (340)
T ss_dssp             HHTTTSCEEEEEESSCHHH-HHHHHHTEEEEEEEEECCCTTS
T ss_pred             HHhCCCCCcEEEECCCChh-HHHHHHHhcCCCEEEEEeecCC
Confidence            4444  7999999999886 6677799999999999998654

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=2.2e-42  Score=315.86  Aligned_cols=253  Identities=21%  Similarity=0.198  Sum_probs=214.6

Q ss_pred             cccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC--CCCCCCcccccccEEEEEeCCCC
Q 021300            8 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG--NTIYPIVPGHEIVGVVTEVGSKV   85 (314)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~--~~~~p~~~G~e~~G~V~~vG~~v   85 (314)
                      |.+||++++..++++  ++++++|.|+|++|||||||.+++||++|++++.|...  ..++|.++|||++|+|+++|+++
T Consensus         5 ~~~mka~~~~~~~~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v   82 (343)
T 3gaz_A            5 TPTMIAAVVEEANGP--FVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEV   82 (343)
T ss_dssp             -CEEEEEEECSTTCC--EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTC
T ss_pred             chhheEEEEecCCCc--eEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCC
Confidence            567999999876555  89999999999999999999999999999999888643  25789999999999999999999


Q ss_pred             CCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccc
Q 021300           86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL  165 (314)
Q Consensus        86 ~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~  165 (314)
                      ++|++||||+...            .|.                  ....|+|+||+.++++.++++|+++++++|+.++
T Consensus        83 ~~~~vGdrV~~~~------------~g~------------------~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~  132 (343)
T 3gaz_A           83 DSFRVGDAVFGLT------------GGV------------------GGLQGTHAQFAAVDARLLASKPAALTMRQASVLP  132 (343)
T ss_dssp             CSCCTTCEEEEEC------------CSS------------------TTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSH
T ss_pred             CCCCCCCEEEEEe------------CCC------------------CCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhh
Confidence            9999999997421            110                  1246999999999999999999999999999999


Q ss_pred             hhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH---HHH
Q 021300          166 CAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ---DEM  241 (314)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~---~~~  241 (314)
                      +++.|||+++.+..++++|++|||+|+ |++|++++|+++..|++|+++ .+++++ ++++++|++. ++ .+.   +.+
T Consensus       133 ~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~-~~~~~lGa~~-i~-~~~~~~~~~  208 (343)
T 3gaz_A          133 LVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDL-EYVRDLGATP-ID-ASREPEDYA  208 (343)
T ss_dssp             HHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHH-HHHHHHTSEE-EE-TTSCHHHHH
T ss_pred             hhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHH-HHHHHcCCCE-ec-cCCCHHHHH
Confidence            999999999966677999999999995 999999999999999999888 666665 5568899988 66 332   344


Q ss_pred             HHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          242 QAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       242 ~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                      .+.++  ++|++||++|.. .+..++++|+++|+++.+|...   .++...+..+++++.+
T Consensus       209 ~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~~~~~~~g  265 (343)
T 3gaz_A          209 AEHTAGQGFDLVYDTLGGP-VLDASFSAVKRFGHVVSCLGWG---THKLAPLSFKQATYSG  265 (343)
T ss_dssp             HHHHTTSCEEEEEESSCTH-HHHHHHHHEEEEEEEEESCCCS---CCCCHHHHHTTCEEEE
T ss_pred             HHHhcCCCceEEEECCCcH-HHHHHHHHHhcCCeEEEEcccC---ccccchhhhcCcEEEE
Confidence            44444  799999999986 5999999999999999998765   4566777788888874

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=1.5e-42  Score=319.46  Aligned_cols=257  Identities=17%  Similarity=0.245  Sum_probs=218.2

Q ss_pred             ccccchhhhccCCC-CccceeeeeecCCC--CCeEEEEEeeeccChhhhhhHhcCCCC-CCCC---------Cccccccc
Q 021300            9 HPKNAFGWAAKDTS-GVLSPFHFSRRATG--EKDVTFKVTHCGICHSDLHMIKNEWGN-TIYP---------IVPGHEIV   75 (314)
Q Consensus         9 ~~~~~~~~~~~~~~-~~~~~~~~~~p~~~--~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p---------~~~G~e~~   75 (314)
                      ++||++++..++++ +.+++++++.|+|.  +|||||||.++|||++|++++.|.++. ..+|         .++|||++
T Consensus         2 ~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~~   81 (364)
T 1gu7_A            2 ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGL   81 (364)
T ss_dssp             EEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCE
T ss_pred             ceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCceeE
Confidence            46999998876544 34888899999887  999999999999999999999987653 3466         89999999


Q ss_pred             EEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCC-
Q 021300           76 GVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE-  154 (314)
Q Consensus        76 G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~-  154 (314)
                      |+|+++|+++++|++||||++.+                                  ...|+|+||++++++.++++|+ 
T Consensus        82 G~V~~vG~~v~~~~vGdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~~P~~  127 (364)
T 1gu7_A           82 FEVIKVGSNVSSLEAGDWVIPSH----------------------------------VNFGTWRTHALGNDDDFIKLPNP  127 (364)
T ss_dssp             EEEEEECTTCCSCCTTCEEEESS----------------------------------SCCCCSBSEEEEEGGGEEEECCH
T ss_pred             EEEEEeCCCCCcCCCCCEEEecC----------------------------------CCCCcchheEecCHHHeEEcCCc
Confidence            99999999999999999997521                                  1359999999999999999998 


Q ss_pred             ----------CCCcccccccchhhhhhhhhhHhcCCCCCC-CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhh---
Q 021300          155 ----------GTPLDATAPLLCAGITVYSPLRFYGLDKPG-MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK---  219 (314)
Q Consensus       155 ----------~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g-~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~---  219 (314)
                                ++++++|+.+++++.|||+++.+..++++| ++|||+|+ |++|++++|+|+.+|+++++++++.++   
T Consensus       128 ~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~  207 (364)
T 1gu7_A          128 AQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDE  207 (364)
T ss_dssp             HHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHH
T ss_pred             cccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHH
Confidence                      899999999999999999999887778999 99999998 999999999999999999988876554   


Q ss_pred             HHHHHHHcCCcEEecCCC---H---HHHHHHc----CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-Ccccch
Q 021300          220 KSEAIERLGADSFLVSRD---Q---DEMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPA  288 (314)
Q Consensus       220 ~~~~~~~~ga~~~v~~~~---~---~~~~~~~----~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~  288 (314)
                      +.++++++|++.++++++   .   +.+.+++    +++|++||++|+.. ...++++++++|+++.+|...+ +..++.
T Consensus       208 ~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~  286 (364)
T 1gu7_A          208 VVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIARKLNNNGLMLTYGGMSFQPVTIPT  286 (364)
T ss_dssp             HHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHH-HHHHHHTSCTTCEEEECCCCSSCCEEECH
T ss_pred             HHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchh-HHHHHHHhccCCEEEEecCCCCCCcccCH
Confidence            234558999999998764   2   3455554    37999999999886 4588999999999999998653 567787


Q ss_pred             hhhhcCceeEee
Q 021300          289 FSLLMGEEEDSW  300 (314)
Q Consensus       289 ~~~~~~~~~i~~  300 (314)
                      ..++.+++++.+
T Consensus       287 ~~~~~~~~~~~g  298 (364)
T 1gu7_A          287 SLYIFKNFTSAG  298 (364)
T ss_dssp             HHHHHSCCEEEE
T ss_pred             HHHhhcCcEEEE
Confidence            788888888874

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=8.7e-43  Score=316.03  Aligned_cols=258  Identities=21%  Similarity=0.276  Sum_probs=219.8

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ||++++..++++..+++++++.|+|++|||||||.++|||++|++++.|.++. .++|.++|||++|+|+++|  +++|+
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~   78 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFH   78 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCC
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCC
Confidence            88999998887777999999999999999999999999999999999987764 4789999999999999998  57899


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||||++.+    |                         ..+....|+|+||+.++++.++++|+++++++|+.+++.+.
T Consensus        79 vGdrV~~~~----~-------------------------~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  129 (324)
T 3nx4_A           79 AGQEVLLTG----W-------------------------GVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGF  129 (324)
T ss_dssp             TTCEEEEEC----T-------------------------TBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHH
T ss_pred             CCCEEEEcc----c-------------------------ccCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHH
Confidence            999997532    1                         01334679999999999999999999999999999999999


Q ss_pred             hhhhhhHhc--CCCCCCC-EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHc
Q 021300          170 TVYSPLRFY--GLDKPGM-HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM  245 (314)
Q Consensus       170 ta~~~l~~~--~~~~~g~-~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~  245 (314)
                      |||++++..  ..+++++ +|||+|+ |++|++++|+|+.+|++|+++++++++++ +++++|++.++++++.+.+.++.
T Consensus       130 ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~-~~~~lGa~~vi~~~~~~~~~~~~  208 (324)
T 3nx4_A          130 TAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHG-YLKSLGANRILSRDEFAESRPLE  208 (324)
T ss_dssp             HHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH-HHHHHTCSEEEEGGGSSCCCSSC
T ss_pred             HHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHhcCCCEEEecCCHHHHHhhc
Confidence            999988533  3356633 4999998 99999999999999999999999988774 55789999999987655433333


Q ss_pred             -CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEeee
Q 021300          246 -GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       246 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~~~  301 (314)
                       +++|++||++|+. .+..++++++++|+++.+|...+ ..+++...++.+++++.++
T Consensus       209 ~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~  265 (324)
T 3nx4_A          209 KQLWAGAIDTVGDK-VLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGV  265 (324)
T ss_dssp             CCCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEEC
T ss_pred             CCCccEEEECCCcH-HHHHHHHHHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEE
Confidence             3799999999987 59999999999999999998765 3577778888888888743

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=6.5e-42  Score=311.51  Aligned_cols=254  Identities=23%  Similarity=0.238  Sum_probs=216.1

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCC--CC-CCCCCcccccccEEEEEeCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW--GN-TIYPIVPGHEIVGVVTEVGSKVSK   87 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~--~~-~~~p~~~G~e~~G~V~~vG~~v~~   87 (314)
                      ||++++..++.+..+++++.|.|+|++|||||||.++|||++|++++.|.+  .. ..+|.++|||++|+|+++|+++++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD   81 (333)
T ss_dssp             CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred             cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence            889998887777778999999999999999999999999999999988866  22 467999999999999999999999


Q ss_pred             CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCccc--ccccc
Q 021300           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDA--TAPLL  165 (314)
Q Consensus        88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~--aa~~~  165 (314)
                      |++||||+..+                                  ...|+|+||+.++++.++++|+++++++  |++++
T Consensus        82 ~~~GdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~  127 (333)
T 1wly_A           82 FTVGERVCTCL----------------------------------PPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLM  127 (333)
T ss_dssp             CCTTCEEEECS----------------------------------SSCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHH
T ss_pred             CCCCCEEEEec----------------------------------CCCCcceeEEEecHHHcEeCCCCCChHHhCccchh
Confidence            99999996421                                  0258999999999999999999999999  89999


Q ss_pred             hhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HH
Q 021300          166 CAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EM  241 (314)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~  241 (314)
                      +++.|||+++.+..++++|++|||+|+ |++|++++|+++..|++|+++++++++.+.+ +++|++.+++..+.+   .+
T Consensus       128 ~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~-~~~g~~~~~d~~~~~~~~~i  206 (333)
T 1wly_A          128 LKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETA-RKLGCHHTINYSTQDFAEVV  206 (333)
T ss_dssp             HHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTCSEEEETTTSCHHHHH
T ss_pred             hhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCCEEEECCCHHHHHHH
Confidence            999999999987777899999999996 9999999999999999999999998776554 678999888876653   33


Q ss_pred             HHHc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-Ccccchh-hhhcCc--eeEee
Q 021300          242 QAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAF-SLLMGE--EEDSW  300 (314)
Q Consensus       242 ~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~-~~~~~~--~~i~~  300 (314)
                      .+..  .++|++||++|.. .+..++++++++|+++.+|...+ +..++.. .++.++  +++.+
T Consensus       207 ~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g  270 (333)
T 1wly_A          207 REITGGKGVDVVYDSIGKD-TLQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRP  270 (333)
T ss_dssp             HHHHTTCCEEEEEECSCTT-THHHHHHTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECC
T ss_pred             HHHhCCCCCeEEEECCcHH-HHHHHHHhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEE
Confidence            3443  3699999999984 69999999999999999998764 4567777 777788  77763

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-41  Score=309.27  Aligned_cols=253  Identities=22%  Similarity=0.282  Sum_probs=218.1

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      ||++++..++.+..+++++++.|+|+++||||||.+++||++|++++.|.++...+|.++|||++|+|+++|+++++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~   81 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKA   81 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            88999888776777889999999999999999999999999999999987765568999999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t  170 (314)
                      ||||.. +     +                            ...|+|+||+.++++.++++|+++++++|+++++++.|
T Consensus        82 GdrV~~-~-----g----------------------------~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~t  127 (327)
T 1qor_A           82 GDRVVY-A-----Q----------------------------SALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLT  127 (327)
T ss_dssp             TCEEEE-S-----C----------------------------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCEEEE-C-----C----------------------------CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHH
Confidence            999942 1     0                            13589999999999999999999999999999999999


Q ss_pred             hhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHHcC
Q 021300          171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAMG  246 (314)
Q Consensus       171 a~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~~  246 (314)
                      ||+++.+..++++|++|||+|+ |++|++++|+++..|++|+++++++++.+.+ +++|++.++++.+.+.   +.+..+
T Consensus       128 a~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~  206 (327)
T 1qor_A          128 VYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA-LKAGAWQVINYREEDLVERLKEITG  206 (327)
T ss_dssp             HHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HHHTCSEEEETTTSCHHHHHHHHTT
T ss_pred             HHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEECCCccHHHHHHHHhC
Confidence            9999987777899999999995 9999999999999999999999988776554 6789998888766543   333332


Q ss_pred             --CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-cccchhhhhcC-ceeEe
Q 021300          247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMG-EEEDS  299 (314)
Q Consensus       247 --~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~~~~~~~~~~~-~~~i~  299 (314)
                        ++|++||++| ...+..++++|+++|+++.+|...+. ..++...++.+ ++.+.
T Consensus       207 ~~~~D~vi~~~g-~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~  262 (327)
T 1qor_A          207 GKKVRVVYDSVG-RDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVT  262 (327)
T ss_dssp             TCCEEEEEECSC-GGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEE
T ss_pred             CCCceEEEECCc-hHHHHHHHHHhcCCCEEEEEecCCCCCCccCHHHHhhccceEEE
Confidence              6999999999 45699999999999999999987653 46777777777 66665

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=4.1e-42  Score=314.79  Aligned_cols=251  Identities=23%  Similarity=0.339  Sum_probs=206.2

Q ss_pred             ccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCC
Q 021300            9 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSK   87 (314)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~   87 (314)
                      ++||++++..++++..+++.+.+.|+|++|||||||++++||++|++++.|.++. ..+|.++|||++|+|+++|+++++
T Consensus         2 m~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~   81 (349)
T 4a27_A            2 MEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKG   81 (349)
T ss_dssp             CCEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCCS
T ss_pred             ceeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCCC
Confidence            4699999998887778999999999999999999999999999999999998653 578999999999999999999999


Q ss_pred             CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (314)
Q Consensus        88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~  167 (314)
                      |++||||+..                                   ...|+|+||+.++.++++++|+++++++++.++++
T Consensus        82 ~~~GdrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~  126 (349)
T 4a27_A           82 YEIGDRVMAF-----------------------------------VNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMN  126 (349)
T ss_dssp             CCTTCEEEEE-----------------------------------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHH
T ss_pred             CCCCCEEEEe-----------------------------------cCCCcceEEEEecHHHeEECCCCCCHHHHHHHHHH
Confidence            9999999742                                   24699999999999999999999999999999999


Q ss_pred             hhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHH
Q 021300          168 GITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQ  242 (314)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~  242 (314)
                      +.|||+++.+..++++|++|||+|+ |++|++++|+|+.+| ++|+.+. ++++. ++++ +|++.+++ .+.+   .+.
T Consensus       127 ~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~-~~~~-~ga~~~~~-~~~~~~~~~~  202 (349)
T 4a27_A          127 FVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKH-EAIK-DSVTHLFD-RNADYVQEVK  202 (349)
T ss_dssp             HHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGH-HHHG-GGSSEEEE-TTSCHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHH-HHHH-cCCcEEEc-CCccHHHHHH
Confidence            9999999987778999999999998 999999999999985 5777766 55555 4445 99999988 4433   344


Q ss_pred             HHcC-CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-----------------CcccchhhhhcCceeEe
Q 021300          243 AAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-----------------PLELPAFSLLMGEEEDS  299 (314)
Q Consensus       243 ~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-----------------~~~~~~~~~~~~~~~i~  299 (314)
                      ++.+ ++|++||++|+.. +..++++|+++|+++.+|....                 ...++...++.+++++.
T Consensus       203 ~~~~~g~Dvv~d~~g~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~  276 (349)
T 4a27_A          203 RISAEGVDIVLDCLCGDN-TGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIA  276 (349)
T ss_dssp             HHCTTCEEEEEEECC--------CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEE
T ss_pred             HhcCCCceEEEECCCchh-HHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEE
Confidence            4443 7999999999886 6899999999999999997531                 12356667777787776

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=4.3e-41  Score=310.85  Aligned_cols=242  Identities=23%  Similarity=0.272  Sum_probs=207.4

Q ss_pred             CCcccccchhhhccCCCCccce-eeeeecCC-CCCeEEEEEeeeccChhhhhhHhcCCC---------------CCCCCC
Q 021300            6 EQEHPKNAFGWAAKDTSGVLSP-FHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWG---------------NTIYPI   68 (314)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~-~~~eVlVkv~a~~l~~~d~~~~~~~~~---------------~~~~p~   68 (314)
                      .++..|+++++..++++..+++ ++++.|+| ++|||||||.++|||++|++++.|..+               ..++|.
T Consensus        17 ~~~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~   96 (375)
T 2vn8_A           17 NLYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPL   96 (375)
T ss_dssp             -CCCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSB
T ss_pred             ccCccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCc
Confidence            3567799999988777777888 89999985 999999999999999999999887531               123799


Q ss_pred             cccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCc
Q 021300           69 VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF  148 (314)
Q Consensus        69 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~  148 (314)
                      ++|||++|+|+++|+++++|++||||+..+.                                ....|+|+||++++++.
T Consensus        97 v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~--------------------------------~~~~G~~aey~~v~~~~  144 (375)
T 2vn8_A           97 TLGRDVSGVVMECGLDVKYFKPGDEVWAAVP--------------------------------PWKQGTLSEFVVVSGNE  144 (375)
T ss_dssp             CCCCEEEEEEEEECTTCCSCCTTCEEEEECC--------------------------------TTSCCSSBSEEEEEGGG
T ss_pred             ccceeeeEEEEEeCCCCCCCCCCCEEEEecC--------------------------------CCCCccceeEEEEcHHH
Confidence            9999999999999999999999999975321                                12469999999999999


Q ss_pred             eEECCCCCCcccccccchhhhhhhhhhHhcCC----CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHH
Q 021300          149 VVRIPEGTPLDATAPLLCAGITVYSPLRFYGL----DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEA  223 (314)
Q Consensus       149 ~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~----~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~  223 (314)
                      ++++|+++++++||.+++++.|||+++.+..+    +++|++|||+|+ |++|++++|+|+..|++|++++ ++++. ++
T Consensus       145 ~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~-~~  222 (375)
T 2vn8_A          145 VSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDAS-EL  222 (375)
T ss_dssp             EEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGH-HH
T ss_pred             eeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHH-HH
Confidence            99999999999999999999999999976677    899999999995 9999999999999999998887 55555 55


Q ss_pred             HHHcCCcEEecCCCHHHHHHHc--CCccEEEEccCCc-ccHHHHHHhhccCCEEEEEcCCC
Q 021300          224 IERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       224 ~~~~ga~~~v~~~~~~~~~~~~--~~~d~v~d~~g~~-~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      ++++|++.++++.+.+...++.  .++|++||++|.. .++..++++++++|+++.+|...
T Consensus       223 ~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~  283 (375)
T 2vn8_A          223 VRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPF  283 (375)
T ss_dssp             HHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSH
T ss_pred             HHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCc
Confidence            6899999999987765554443  4799999999987 44578889999999999999754

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.8e-41  Score=304.14  Aligned_cols=259  Identities=21%  Similarity=0.263  Sum_probs=214.2

Q ss_pred             cccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCC
Q 021300           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKF   88 (314)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~   88 (314)
                      +||++++..++.+..++++++|.|+|+++||||||.++|||++|++.+.|.++. ..+|.++|||++|+|+++  ++++|
T Consensus         3 ~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~~~   80 (328)
T 1xa0_A            3 AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHPRF   80 (328)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSSSC
T ss_pred             cceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCCCC
Confidence            599999988765556889999999999999999999999999999988886543 367999999999999995  56889


Q ss_pred             CCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhh
Q 021300           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG  168 (314)
Q Consensus        89 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~  168 (314)
                      ++||||++...                             ..+....|+|+||++++++.++++|+++++++|+.+++++
T Consensus        81 ~vGdrV~~~~~-----------------------------~~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~  131 (328)
T 1xa0_A           81 REGDEVIATGY-----------------------------EIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAG  131 (328)
T ss_dssp             CTTCEEEEEST-----------------------------TBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHH
T ss_pred             CCCCEEEEccc-----------------------------cCCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhH
Confidence            99999975320                             0122357999999999999999999999999999999999


Q ss_pred             hhhhhhhHh--cCCCCCCC-EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH--HHH
Q 021300          169 ITVYSPLRF--YGLDKPGM-HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQ  242 (314)
Q Consensus       169 ~ta~~~l~~--~~~~~~g~-~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~--~~~  242 (314)
                      .|+|.+++.  ...+++|+ +|||+|+ |++|++++|+++.+|++|+++++++++++. ++++|++.++++.+.+  .+.
T Consensus       132 ~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~-~~~lGa~~~i~~~~~~~~~~~  210 (328)
T 1xa0_A          132 FTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDY-LRVLGAKEVLAREDVMAERIR  210 (328)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHH-HHHTTCSEEEECC--------
T ss_pred             HHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHcCCcEEEecCCcHHHHHH
Confidence            999988753  24578997 9999998 999999999999999999999998877754 4789999999887642  233


Q ss_pred             HHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEeee
Q 021300          243 AAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       243 ~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~~~  301 (314)
                      ++. +++|++||++|+. .+..++++++++|+++.+|...+ +.+++...++.+++++.++
T Consensus       211 ~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~  270 (328)
T 1xa0_A          211 PLDKQRWAAAVDPVGGR-TLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGI  270 (328)
T ss_dssp             -CCSCCEEEEEECSTTT-THHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEEC
T ss_pred             HhcCCcccEEEECCcHH-HHHHHHHhhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEE
Confidence            333 3799999999986 59999999999999999998764 4567777778888888753

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=2.7e-41  Score=307.07  Aligned_cols=261  Identities=20%  Similarity=0.229  Sum_probs=215.9

Q ss_pred             cccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCC
Q 021300            8 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVS   86 (314)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~   86 (314)
                      +.+||++++..++++..++++++|.|+|++|||||||+++|||++|++++.|.++. ..+|.++|||++|+|+++  +++
T Consensus         2 ~~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~--~v~   79 (330)
T 1tt7_A            2 STLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSS--NDP   79 (330)
T ss_dssp             CCEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEEC--SST
T ss_pred             CCcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEc--CCC
Confidence            35699999988765567889999999999999999999999999999998886543 367899999999999996  467


Q ss_pred             CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccch
Q 021300           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC  166 (314)
Q Consensus        87 ~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~  166 (314)
                      +|++||||++...                             ..+....|+|+||+.++++.++++|+++++++|+.+++
T Consensus        80 ~~~vGdrV~~~~~-----------------------------~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~  130 (330)
T 1tt7_A           80 RFAEGDEVIATSY-----------------------------ELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGT  130 (330)
T ss_dssp             TCCTTCEEEEEST-----------------------------TBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHH
T ss_pred             CCCCCCEEEEccc-----------------------------ccCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccc
Confidence            8999999975320                             01223579999999999999999999999999999999


Q ss_pred             hhhhhhhhhHh--cCCCCCCC-EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH--H
Q 021300          167 AGITVYSPLRF--YGLDKPGM-HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD--E  240 (314)
Q Consensus       167 ~~~ta~~~l~~--~~~~~~g~-~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~--~  240 (314)
                      ++.|||.+++.  ...+++|+ +|||+|+ |++|++++|+++.+|++++++++++++++ +++++|++.++++.+.+  .
T Consensus       131 ~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~-~~~~lGa~~v~~~~~~~~~~  209 (330)
T 1tt7_A          131 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAAD-YLKQLGASEVISREDVYDGT  209 (330)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHH-HHHHHTCSEEEEHHHHCSSC
T ss_pred             hHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCcEEEECCCchHHH
Confidence            99999988753  24578997 9999998 99999999999999999999999877764 45789999988765432  1


Q ss_pred             HHHHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEeee
Q 021300          241 MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       241 ~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~~~  301 (314)
                      +.++. +++|++||++|+. .+..++++++++|+++.+|...+ +.+++...++.+++++.++
T Consensus       210 ~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~  271 (330)
T 1tt7_A          210 LKALSKQQWQGAVDPVGGK-QLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGI  271 (330)
T ss_dssp             CCSSCCCCEEEEEESCCTH-HHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEEC
T ss_pred             HHHhhcCCccEEEECCcHH-HHHHHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEE
Confidence            11222 3699999999986 59999999999999999998754 4567777788888888743

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=1.4e-40  Score=305.97  Aligned_cols=253  Identities=19%  Similarity=0.268  Sum_probs=212.1

Q ss_pred             CcccccchhhhccCCC--Cccce-eeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeC
Q 021300            7 QEHPKNAFGWAAKDTS--GVLSP-FHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVG   82 (314)
Q Consensus         7 ~~~~~~~~~~~~~~~~--~~~~~-~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG   82 (314)
                      ++.+||++++..++++  +.+++ +++|.|+|++|||||||.++|||++|++++.|.++. ..+|.++|||++|+|+++|
T Consensus        20 ~~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~vG   99 (362)
T 2c0c_A           20 FQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALG   99 (362)
T ss_dssp             HCCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEEC
T ss_pred             chhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEEC
Confidence            4567999999876543  45888 999999999999999999999999999999887643 4689999999999999999


Q ss_pred             CCCC-CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccc
Q 021300           83 SKVS-KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDAT  161 (314)
Q Consensus        83 ~~v~-~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a  161 (314)
                      ++++ +|++||||++.                                    ..|+|+||++++++.++++|+. + .++
T Consensus       100 ~~V~~~~~vGdrV~~~------------------------------------~~G~~aey~~v~~~~~~~~P~~-~-~~a  141 (362)
T 2c0c_A          100 LSASARYTVGQAVAYM------------------------------------APGSFAEYTVVPASIATPVPSV-K-PEY  141 (362)
T ss_dssp             TTGGGTCCTTCEEEEE------------------------------------CSCCSBSEEEEEGGGCEECSSS-C-HHH
T ss_pred             CCccCCCCCCCEEEEc------------------------------------cCCcceeEEEEcHHHeEECCCC-c-hHh
Confidence            9999 99999999741                                    3599999999999999999986 3 466


Q ss_pred             cccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH-
Q 021300          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD-  239 (314)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~-  239 (314)
                      ++++.++.|||+++.+..++++|++|||+|+ |++|++++|+++..|++|+++++++++++ +++++|++.++++.+.+ 
T Consensus       142 aal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~-~~~~~Ga~~~~~~~~~~~  220 (362)
T 2c0c_A          142 LTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSA-FLKSLGCDRPINYKTEPV  220 (362)
T ss_dssp             HTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHTTCSEEEETTTSCH
T ss_pred             hcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHH-HHHHcCCcEEEecCChhH
Confidence            7888899999999987777899999999995 99999999999999999999999877764 45789999998876643 


Q ss_pred             --HHHHHcC-CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCc-----------ccchhhhhcCceeEee
Q 021300          240 --EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL-----------ELPAFSLLMGEEEDSW  300 (314)
Q Consensus       240 --~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~-----------~~~~~~~~~~~~~i~~  300 (314)
                        .+.+..+ ++|++||++|.. .+..++++++++|+++.+|...+..           .++ ..++.+++++.+
T Consensus       221 ~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~g  293 (362)
T 2c0c_A          221 GTVLKQEYPEGVDVVYESVGGA-MFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLP-AKLLKKSASVQG  293 (362)
T ss_dssp             HHHHHHHCTTCEEEEEECSCTH-HHHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTHH-HHHHHHTCEEEE
T ss_pred             HHHHHHhcCCCCCEEEECCCHH-HHHHHHHHHhcCCEEEEEeCCCCcCcccccccccccccH-HHHHhhcceEEE
Confidence              3333333 799999999985 5899999999999999999764311           222 456677888763

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=2.2e-39  Score=295.10  Aligned_cols=250  Identities=21%  Similarity=0.216  Sum_probs=212.8

Q ss_pred             ccccchhhhcc--C--CCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCccccc----ccEEEEE
Q 021300            9 HPKNAFGWAAK--D--TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHE----IVGVVTE   80 (314)
Q Consensus         9 ~~~~~~~~~~~--~--~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e----~~G~V~~   80 (314)
                      .+||++++...  +  +++.+++.++|.|+|++|||||||++++||++|...+.+... ..+|.++|||    ++|+|++
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~-~~~p~~~G~e~g~~~~G~V~~   84 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS-YIPPVGIGEVMRALGVGKVLV   84 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC-SSCCCCTTSBCCCEEEEEEEE
T ss_pred             ccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc-cCCCCCCCcccCCceEEEEEe
Confidence            56999999762  2  467899999999999999999999999999999887766432 2457777777    7999999


Q ss_pred             eCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCccc
Q 021300           81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDA  160 (314)
Q Consensus        81 vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~  160 (314)
                      .  ++++|++||||+.                                      .|+|+||++++++.++++|+++++.+
T Consensus        85 ~--~v~~~~vGdrV~~--------------------------------------~G~~aey~~v~~~~~~~~P~~~~~~~  124 (336)
T 4b7c_A           85 S--KHPGFQAGDYVNG--------------------------------------ALGVQDYFIGEPKGFYKVDPSRAPLP  124 (336)
T ss_dssp             E--CSTTCCTTCEEEE--------------------------------------ECCSBSEEEECCTTCEEECTTTSCGG
T ss_pred             c--CCCCCCCCCEEec--------------------------------------cCCceEEEEechHHeEEcCCCCCchH
Confidence            4  5889999999972                                      48899999999999999999998777


Q ss_pred             c--cccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCC
Q 021300          161 T--APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD  237 (314)
Q Consensus       161 a--a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~  237 (314)
                      +  +++++++.|||+++.+..++++|++|||+|+ |++|++++|+++..|++|+++++++++.+.+.+++|++.++++.+
T Consensus       125 ~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~  204 (336)
T 4b7c_A          125 RYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKN  204 (336)
T ss_dssp             GGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTT
T ss_pred             HHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCC
Confidence            6  7899999999999977777999999999998 999999999999999999999999888876668999999998877


Q ss_pred             HHH---HHHHcC-CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-------CcccchhhhhcCceeEee
Q 021300          238 QDE---MQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-------PLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       238 ~~~---~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-------~~~~~~~~~~~~~~~i~~  300 (314)
                      .+.   +.+.++ ++|++||++|.. .+..++++++++|+++.+|...+       ...++...++.+++++.+
T Consensus       205 ~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g  277 (336)
T 4b7c_A          205 EDLAAGLKRECPKGIDVFFDNVGGE-ILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEG  277 (336)
T ss_dssp             SCHHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEE
T ss_pred             HHHHHHHHHhcCCCceEEEECCCcc-hHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEE
Confidence            543   334443 799999999976 59999999999999999997652       146677778889998874

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=4.3e-40  Score=304.50  Aligned_cols=252  Identities=15%  Similarity=0.082  Sum_probs=208.2

Q ss_pred             CcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC------------------------
Q 021300            7 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG------------------------   62 (314)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~------------------------   62 (314)
                      .+..||++.+..  .+..+++++++.|+|++|||||||++++||++|++++.|.++                        
T Consensus         4 ~~~~mka~v~~~--~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~   81 (379)
T 3iup_A            4 SALQLRSRIKSS--GELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAM   81 (379)
T ss_dssp             EEEEEEEEECTT--SEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHH
T ss_pred             chhhHHHHHhcC--CCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccc
Confidence            356788887753  344689999999999999999999999999999999887521                        


Q ss_pred             -----CCCCCCcccccccEEEEEeCCCC-CCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCc
Q 021300           63 -----NTIYPIVPGHEIVGVVTEVGSKV-SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYG  136 (314)
Q Consensus        63 -----~~~~p~~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g  136 (314)
                           ..++|.++|||++|+|+++|+++ ++|++||||++.                                    ..|
T Consensus        82 ~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~------------------------------------~~G  125 (379)
T 3iup_A           82 RSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAI------------------------------------GGA  125 (379)
T ss_dssp             HHHGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEEC------------------------------------CSC
T ss_pred             cccccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEec------------------------------------CCC
Confidence                 23578999999999999999999 889999999742                                    359


Q ss_pred             ccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEE--cCChHHHHHHHHHHHCCCeEEEEe
Q 021300          137 GYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV--GLGGLGHVAVKFAKAMGVKVTVIS  214 (314)
Q Consensus       137 ~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~--Gag~vG~~a~~~a~~~g~~vi~v~  214 (314)
                      +|+||++++++.++++|+++++++|+++++...|||++++...  ++|++|||+  |+|++|++++|+|+.+|++|++++
T Consensus       126 ~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~--~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~  203 (379)
T 3iup_A          126 MYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMVETMR--LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIV  203 (379)
T ss_dssp             CSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHHHHHH--HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEE
T ss_pred             cceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhc--cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            9999999999999999999999999999999999998887655  899999999  459999999999999999999999


Q ss_pred             CChhhHHHHHHHcCCcEEecCCCHHH---HHHHcC--CccEEEEccCCcccHHHHHHhhc-----cC-----------CE
Q 021300          215 TSPSKKSEAIERLGADSFLVSRDQDE---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLK-----SQ-----------GK  273 (314)
Q Consensus       215 ~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~-----~~-----------G~  273 (314)
                      ++++++ ++++++|++.++++++.++   +.++++  ++|++||++|+...+..++++++     ++           |+
T Consensus       204 ~~~~~~-~~~~~lGa~~~~~~~~~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~  282 (379)
T 3iup_A          204 RKQEQA-DLLKAQGAVHVCNAASPTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQ  282 (379)
T ss_dssp             SSHHHH-HHHHHTTCSCEEETTSTTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEE
T ss_pred             CCHHHH-HHHHhCCCcEEEeCCChHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCce
Confidence            888776 5557899999999887654   344443  79999999998776788888885     44           66


Q ss_pred             EEEEcCCCCCcccchhhhhcCceeEee
Q 021300          274 LVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       274 ~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                      ++.+|.... ..++...++.+++++.+
T Consensus       283 iv~~G~~~~-~~~~~~~~~~~~~~i~g  308 (379)
T 3iup_A          283 VYLYGGLDT-SPTEFNRNFGMAWGMGG  308 (379)
T ss_dssp             EEECCCSEE-EEEEECCCSCSCEEEEE
T ss_pred             EEEecCCCC-CccccccccccceEEEE
Confidence            666665432 23445566777888763

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=1.1e-38  Score=286.50  Aligned_cols=237  Identities=25%  Similarity=0.375  Sum_probs=201.1

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ||++++..++++.  .+++.|.|+|+++||||||.++|||++|++++.|.++. ..+|.++|||++|+|+          
T Consensus         1 Mka~~~~~~g~~~--~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~----------   68 (302)
T 1iz0_A            1 MKAWVLKRLGGPL--ELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE----------   68 (302)
T ss_dssp             CEEEEECSTTSCE--EEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET----------
T ss_pred             CeEEEEcCCCCch--heEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE----------
Confidence            6788887655553  34588999999999999999999999999999887653 3689999999999998          


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                       ||||+..                                   ...|+|+||+.++++.++++|+++++++++++++++.
T Consensus        69 -GdrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  112 (302)
T 1iz0_A           69 -GRRYAAL-----------------------------------VPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFL  112 (302)
T ss_dssp             -TEEEEEE-----------------------------------CSSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHH
T ss_pred             -CcEEEEe-----------------------------------cCCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHH
Confidence             9999742                                   2459999999999999999999999999999999999


Q ss_pred             hhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCC-HHHHHHHcCC
Q 021300          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGT  247 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~-~~~~~~~~~~  247 (314)
                      |||+++.+.. +++|++|||+|+ |++|++++|+++..|++|+++++++++++.+ +++|++.++++.+ .+...++ ++
T Consensus       113 ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~ga~~~~~~~~~~~~~~~~-~~  189 (302)
T 1iz0_A          113 TAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP-LALGAEEAATYAEVPERAKAW-GG  189 (302)
T ss_dssp             HHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH-HHTTCSEEEEGGGHHHHHHHT-TS
T ss_pred             HHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCCEEEECCcchhHHHHh-cC
Confidence            9999998667 899999999998 9999999999999999999999988877544 7899999998877 6655555 78


Q ss_pred             ccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-cccchhhhhcCceeEee
Q 021300          248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGEEEDSW  300 (314)
Q Consensus       248 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~~~~~~~~~~~~~~i~~  300 (314)
                      +|++|| +|.. .+..++++++++|+++.+|...+. ..++...++.+++++.+
T Consensus       190 ~d~vid-~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g  241 (302)
T 1iz0_A          190 LDLVLE-VRGK-EVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLG  241 (302)
T ss_dssp             EEEEEE-CSCT-THHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEE
T ss_pred             ceEEEE-CCHH-HHHHHHHhhccCCEEEEEeCCCCCCCCcCHHHHHhCCCeEEE
Confidence            999999 9985 699999999999999999987643 36777778888888874

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=1.6e-38  Score=291.75  Aligned_cols=254  Identities=14%  Similarity=0.119  Sum_probs=209.7

Q ss_pred             CCcccccchhh-hcc---CCC--CccceeeeeecCC-CCCeEEEEEeeeccChhhhhhHhc----CCC-CCCCCCccccc
Q 021300            6 EQEHPKNAFGW-AAK---DTS--GVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKN----EWG-NTIYPIVPGHE   73 (314)
Q Consensus         6 ~~~~~~~~~~~-~~~---~~~--~~~~~~~~~~p~~-~~~eVlVkv~a~~l~~~d~~~~~~----~~~-~~~~p~~~G~e   73 (314)
                      .++.+||++++ ...   +.|  +.+++++++.|+| ++|||||||.++|||++|++.+.+    .+. ...+|.++|||
T Consensus         4 ~~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E   83 (357)
T 2zb4_A            4 AAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGG   83 (357)
T ss_dssp             --CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEE
T ss_pred             cccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCcccccc
Confidence            46778999999 443   444  6789999999999 999999999999999999887665    232 23678999999


Q ss_pred             ccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECC
Q 021300           74 IVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP  153 (314)
Q Consensus        74 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p  153 (314)
                      ++|+|++  +++++|++||||++                                     ..|+|+||++++.+.++++|
T Consensus        84 ~~G~V~~--~~v~~~~vGdrV~~-------------------------------------~~G~~aey~~v~~~~~~~iP  124 (357)
T 2zb4_A           84 GIGIIEE--SKHTNLTKGDFVTS-------------------------------------FYWPWQTKVILDGNSLEKVD  124 (357)
T ss_dssp             EEEEEEE--ECSTTCCTTCEEEE-------------------------------------EEEESBSEEEEEGGGCEECC
T ss_pred             EEEEEEe--cCCCCCCCCCEEEe-------------------------------------cCCCcEEEEEEchHHceecC
Confidence            9999999  88999999999974                                     23789999999999999999


Q ss_pred             CCC-----CcccccccchhhhhhhhhhHhcCCCCCC--CEEEEEcC-ChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHH
Q 021300          154 EGT-----PLDATAPLLCAGITVYSPLRFYGLDKPG--MHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAI  224 (314)
Q Consensus       154 ~~~-----~~~~aa~~~~~~~ta~~~l~~~~~~~~g--~~vlI~Ga-g~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~  224 (314)
                      +++     +++ ++++++++.|||+++.+..++++|  ++|||+|+ |++|++++|+++..|+ +|+++++++++++.+.
T Consensus       125 ~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~  203 (357)
T 2zb4_A          125 PQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLT  203 (357)
T ss_dssp             GGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred             cccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH
Confidence            999     555 678999999999999766778999  99999998 9999999999999999 9999999988876665


Q ss_pred             HHcCCcEEecCCCHH---HHHHHcC-CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-cccch---------hh
Q 021300          225 ERLGADSFLVSRDQD---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPA---------FS  290 (314)
Q Consensus       225 ~~~ga~~~v~~~~~~---~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~~~~~---------~~  290 (314)
                      +++|++.++++.+.+   .+.+..+ ++|++||++|.. .+..++++++++|+++.+|...+. ..++.         ..
T Consensus       204 ~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~vi~~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~  282 (357)
T 2zb4_A          204 SELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGN-ISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAI  282 (357)
T ss_dssp             HTSCCSEEEETTTSCHHHHHHHHCTTCEEEEEESCCHH-HHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHH
T ss_pred             HHcCCceEEecCchHHHHHHHHhcCCCCCEEEECCCHH-HHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhh
Confidence            559999988877643   3444443 699999999975 589999999999999999986431 23332         45


Q ss_pred             hhcCceeEee
Q 021300          291 LLMGEEEDSW  300 (314)
Q Consensus       291 ~~~~~~~i~~  300 (314)
                      ++.+++++.+
T Consensus       283 ~~~~~~~i~g  292 (357)
T 2zb4_A          283 QKERNITRER  292 (357)
T ss_dssp             HHHHTCEEEE
T ss_pred             hhcceeEEEE
Confidence            6678888764

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=6.4e-36  Score=271.93  Aligned_cols=250  Identities=19%  Similarity=0.140  Sum_probs=204.3

Q ss_pred             CCCcccccchhhhcc--CC--CCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEE
Q 021300            5 PEQEHPKNAFGWAAK--DT--SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTE   80 (314)
Q Consensus         5 ~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~   80 (314)
                      |+.+.+||++++..+  +.  ++.+++++++.|+|++|||||||.++|||+.|... .   ....+|.++|||++|+|++
T Consensus         2 ~~~~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~---~~~~~p~~~g~e~~G~Vv~   77 (333)
T 1v3u_A            2 PEFMVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-S---KRLKEGAVMMGQQVARVVE   77 (333)
T ss_dssp             --CCCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-T---TTCCTTSBCCCCEEEEEEE
T ss_pred             CcccccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-c---CcCCCCcccccceEEEEEe
Confidence            566778999999875  33  36788899999999999999999999999988632 1   1235688999999999999


Q ss_pred             eCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCC----C
Q 021300           81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG----T  156 (314)
Q Consensus        81 vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~----~  156 (314)
                      .  ++++|++||||++                                      .|+|+||++++.+.++++|++    +
T Consensus        78 ~--~v~~~~vGdrV~~--------------------------------------~g~~aey~~v~~~~~~~iP~~~~~~~  117 (333)
T 1v3u_A           78 S--KNSAFPAGSIVLA--------------------------------------QSGWTTHFISDGKGLEKLLTEWPDKL  117 (333)
T ss_dssp             E--SCTTSCTTCEEEE--------------------------------------CCCSBSEEEESSTTEEECC--CCTTS
T ss_pred             c--CCCCCCCCCEEEe--------------------------------------cCceEEEEEechHHeEEcCcccccCC
Confidence            5  5788999999973                                      378999999999999999997    8


Q ss_pred             Cccc-ccccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEec
Q 021300          157 PLDA-TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV  234 (314)
Q Consensus       157 ~~~~-aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~  234 (314)
                      ++++ ++++++++.|||+++.+..++++|+++||+|+ |++|++++|+++..|++|+++++++++.+.+ +++|++.++|
T Consensus       118 ~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~~~~~d  196 (333)
T 1v3u_A          118 PLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIGFDAAFN  196 (333)
T ss_dssp             CGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCSEEEE
T ss_pred             CHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCcEEEe
Confidence            8888 47899999999999977777899999999998 9999999999999999999999988877666 8899998888


Q ss_pred             CCC-HH---HHHHHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC------Cc-ccchhhhhcCceeEee
Q 021300          235 SRD-QD---EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK------PL-ELPAFSLLMGEEEDSW  300 (314)
Q Consensus       235 ~~~-~~---~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~------~~-~~~~~~~~~~~~~i~~  300 (314)
                      ..+ .+   .+.+.. +++|++||++|.. .+..++++++++|+++.+|...+      +. .++...++.+++++.+
T Consensus       197 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g  273 (333)
T 1v3u_A          197 YKTVNSLEEALKKASPDGYDCYFDNVGGE-FLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEG  273 (333)
T ss_dssp             TTSCSCHHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEE
T ss_pred             cCCHHHHHHHHHHHhCCCCeEEEECCChH-HHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEE
Confidence            765 33   333443 3799999999986 48999999999999999998653      11 2356678888888874

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=3.2e-36  Score=275.20  Aligned_cols=252  Identities=15%  Similarity=0.110  Sum_probs=204.1

Q ss_pred             cccccchhhhcc--CCCC--cccee--eeeecC-CCCCeEEEEEeeeccChhhhhhHhcCCCC----CCCCCcccccccE
Q 021300            8 EHPKNAFGWAAK--DTSG--VLSPF--HFSRRA-TGEKDVTFKVTHCGICHSDLHMIKNEWGN----TIYPIVPGHEIVG   76 (314)
Q Consensus         8 ~~~~~~~~~~~~--~~~~--~~~~~--~~~~p~-~~~~eVlVkv~a~~l~~~d~~~~~~~~~~----~~~p~~~G~e~~G   76 (314)
                      |.+||++.+...  +.|.  .++++  +++.|. |++|||||||.++++|+.|. .+.|.+..    ..+|+++|||.+|
T Consensus         2 ~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G   80 (345)
T 2j3h_A            2 TATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQG   80 (345)
T ss_dssp             EEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEE
T ss_pred             CccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeec
Confidence            345777766665  4555  68887  888887 89999999999999998875 45554422    1468999999999


Q ss_pred             EEEE--eCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCc--eEEC
Q 021300           77 VVTE--VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF--VVRI  152 (314)
Q Consensus        77 ~V~~--vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~--~~~~  152 (314)
                      ++++  +|+++++|++||||+.                                      .|+|+||+.+++..  ++++
T Consensus        81 ~~~~GvV~~~v~~~~vGdrV~~--------------------------------------~g~~aey~~v~~~~~~~~~i  122 (345)
T 2j3h_A           81 YGVSRIIESGHPDYKKGDLLWG--------------------------------------IVAWEEYSVITPMTHAHFKI  122 (345)
T ss_dssp             EEEEEEEEECSTTCCTTCEEEE--------------------------------------EEESBSEEEECCCTTTCEEE
T ss_pred             ceEEEEEecCCCCCCCCCEEEe--------------------------------------ecCceeEEEecccccceeec
Confidence            9999  9999999999999973                                      37899999998876  9999


Q ss_pred             CC---CCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC
Q 021300          153 PE---GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG  228 (314)
Q Consensus       153 p~---~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g  228 (314)
                      |+   .++++ ++++++++.|||+++.+..++++|++|||+|+ |++|++++|+++..|++|+++++++++.+.+.+++|
T Consensus       123 p~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g  201 (345)
T 2j3h_A          123 QHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFG  201 (345)
T ss_dssp             CCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSC
T ss_pred             CCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC
Confidence            96   45655 67889999999999977677899999999997 999999999999999999999999887766644799


Q ss_pred             CcEEecCCCH----HHHHHHcC-CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC------CcccchhhhhcCcee
Q 021300          229 ADSFLVSRDQ----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK------PLELPAFSLLMGEEE  297 (314)
Q Consensus       229 a~~~v~~~~~----~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~------~~~~~~~~~~~~~~~  297 (314)
                      ++.++|+.+.    +.+.+..+ ++|++||++|.. .+..++++++++|+++.+|...+      +..++...++.++++
T Consensus       202 ~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~  280 (345)
T 2j3h_A          202 FDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGK-MLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNR  280 (345)
T ss_dssp             CSEEEETTSCSCSHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCE
T ss_pred             CceEEecCCHHHHHHHHHHHhCCCCcEEEECCCHH-HHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhcee
Confidence            9988887542    34444443 799999999985 58999999999999999997643      345667778888888


Q ss_pred             Eee
Q 021300          298 DSW  300 (314)
Q Consensus       298 i~~  300 (314)
                      +.+
T Consensus       281 i~g  283 (345)
T 2j3h_A          281 IQG  283 (345)
T ss_dssp             EEE
T ss_pred             ece
Confidence            874

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=1.9e-36  Score=302.83  Aligned_cols=226  Identities=22%  Similarity=0.307  Sum_probs=195.1

Q ss_pred             hhhhccCCCCccceeeeee--cCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCC
Q 021300           14 FGWAAKDTSGVLSPFHFSR--RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVG   91 (314)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~--p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   91 (314)
                      +.+..++.++.+++.+.+.  |+|++|||+|||.++|||++|++++.|.++   .|.++|||++|+|+++|++|++|++|
T Consensus       213 l~~~~~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~---~~~~lG~E~aG~V~~vG~~V~~~~vG  289 (795)
T 3slk_A          213 LEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP---GVASLGSEGAGVVVETGPGVTGLAPG  289 (795)
T ss_dssp             EEESSTTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS---SCCCSCCCEEEEEEEECSSCCSSCTT
T ss_pred             EecCCCCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC---CCccccceeEEEEEEeCCCCCcCCCC
Confidence            3444556677788877765  568999999999999999999999888654   35679999999999999999999999


Q ss_pred             CEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhh
Q 021300           92 DKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITV  171 (314)
Q Consensus        92 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta  171 (314)
                      |||+.                                    ...|+|+||+.++...++++|+++++++|+.+++++.||
T Consensus       290 DrV~~------------------------------------~~~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta  333 (795)
T 3slk_A          290 DRVMG------------------------------------MIPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTA  333 (795)
T ss_dssp             CEEEE------------------------------------CCSSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             CEEEE------------------------------------EecCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHH
Confidence            99974                                    245899999999999999999999999999999999999


Q ss_pred             hhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHHcC-
Q 021300          172 YSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAMG-  246 (314)
Q Consensus       172 ~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~~-  246 (314)
                      |+++.+..++++|++|||+|+ |++|++++|+||..|++|++++.++ +.+.+ + +|++.++++++.++   +.+.++ 
T Consensus       334 ~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l-~-lga~~v~~~~~~~~~~~i~~~t~g  410 (795)
T 3slk_A          334 YYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAV-E-LSREHLASSRTCDFEQQFLGATGG  410 (795)
T ss_dssp             HCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGS-C-SCGGGEECSSSSTHHHHHHHHSCS
T ss_pred             HHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhh-h-cChhheeecCChhHHHHHHHHcCC
Confidence            999988888999999999997 9999999999999999999888665 44333 3 89999999887644   444554 


Q ss_pred             -CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300          247 -TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       247 -~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                       ++|+|||++|+.. +..++++|+++|+++.+|....
T Consensus       411 ~GvDvVld~~gg~~-~~~~l~~l~~~Gr~v~iG~~~~  446 (795)
T 3slk_A          411 RGVDVVLNSLAGEF-ADASLRMLPRGGRFLELGKTDV  446 (795)
T ss_dssp             SCCSEEEECCCTTT-THHHHTSCTTCEEEEECCSTTC
T ss_pred             CCeEEEEECCCcHH-HHHHHHHhcCCCEEEEeccccc
Confidence             6999999999864 8999999999999999998654

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.94  E-value=8.4e-27  Score=255.26  Aligned_cols=217  Identities=19%  Similarity=0.225  Sum_probs=180.0

Q ss_pred             CCeEEEEEeeeccChhhhhhHhcCCCCC-------CCCCcccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccc
Q 021300           37 EKDVTFKVTHCGICHSDLHMIKNEWGNT-------IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSC  109 (314)
Q Consensus        37 ~~eVlVkv~a~~l~~~d~~~~~~~~~~~-------~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c  109 (314)
                      ++||+|||.++|||+.|+.+..|.++..       ..|.++|+|++|+|.          +||+|+.             
T Consensus      1559 ~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~----------vGdrV~g------------- 1615 (2512)
T 2vz8_A         1559 CQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA----------SGRRVMG------------- 1615 (2512)
T ss_dssp             HHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET----------TSCCEEE-------------
T ss_pred             CCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc----------cCCEEEE-------------
Confidence            7899999999999999999998876421       246789999999873          7999973             


Q ss_pred             cCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEE
Q 021300          110 AIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV  189 (314)
Q Consensus       110 ~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI  189 (314)
                                            ....|+|+||+.++++.++++|+++++++||.+++++.|||+++....++++|++|||
T Consensus      1616 ----------------------~~~~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI 1673 (2512)
T 2vz8_A         1616 ----------------------MVPAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLI 1673 (2512)
T ss_dssp             ----------------------ECSSCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred             ----------------------eecCCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEE
Confidence                                  2245899999999999999999999999999999999999999987788999999999


Q ss_pred             EcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcEEecCCCHHHHH---HHcC--CccEEEEccCCccc
Q 021300          190 VGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSFLVSRDQDEMQ---AAMG--TMDGIIDTVSAVHP  260 (314)
Q Consensus       190 ~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~~v~~~~~~~~~---~~~~--~~d~v~d~~g~~~~  260 (314)
                      +|+ |++|++++|+||..|++|++++.++++++.+.+.   +|++.++++++.+...   +.++  ++|+|||+++.. .
T Consensus      1674 ~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~g~~-~ 1752 (2512)
T 2vz8_A         1674 HSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEE-K 1752 (2512)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEEEEEECCCHH-H
T ss_pred             EeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCceEEEECCCch-H
Confidence            986 9999999999999999999999998888666553   6789999988765443   3343  699999999855 5


Q ss_pred             HHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEe
Q 021300          261 LMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDS  299 (314)
Q Consensus       261 ~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~  299 (314)
                      +..++++++++|+++.+|.... ........++.+++++.
T Consensus      1753 l~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~ 1792 (2512)
T 2vz8_A         1753 LQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFH 1792 (2512)
T ss_dssp             HHHHHTTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEE
T ss_pred             HHHHHHhcCCCcEEEEeecccccccCcccccccccCCcEE
Confidence            9999999999999999997532 11222244555666665

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.77  E-value=1.4e-18  Score=145.75  Aligned_cols=150  Identities=23%  Similarity=0.295  Sum_probs=111.1

Q ss_pred             CceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH
Q 021300          147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE  225 (314)
Q Consensus       147 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~  225 (314)
                      +.++++|+++++++|+.+++++.|||+++.+..++++|++|||+|+ |++|++++++++..|++|+++++++++.+.+ +
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML-S   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-H
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H
Confidence            4688999999999999999999999999977777899999999996 9999999999999999999999987766444 6


Q ss_pred             HcCCcEEecCCCHHH---HHHHc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC--CcccchhhhhcCceeE
Q 021300          226 RLGADSFLVSRDQDE---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGEEED  298 (314)
Q Consensus       226 ~~ga~~~v~~~~~~~---~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~--~~~~~~~~~~~~~~~i  298 (314)
                      ++|++.+++..+.+.   +.+..  +++|++||++|.. .+..++++|+++|+++.+|....  +..++.. .+.+++++
T Consensus        81 ~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~  158 (198)
T 1pqw_A           81 RLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGE-AIQRGVQILAPGGRFIELGKKDVYADASLGLA-ALAKSASF  158 (198)
T ss_dssp             TTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTH-HHHHHHHTEEEEEEEEECSCGGGTTTCEEEGG-GGTTTCEE
T ss_pred             HcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCchH-HHHHHHHHhccCCEEEEEcCCCCcCcCcCChh-HhcCCcEE
Confidence            789988888766543   33333  2699999999865 58999999999999999998652  2334433 34566666


Q ss_pred             e
Q 021300          299 S  299 (314)
Q Consensus       299 ~  299 (314)
                      .
T Consensus       159 ~  159 (198)
T 1pqw_A          159 S  159 (198)
T ss_dssp             E
T ss_pred             E
Confidence            5

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=99.13  E-value=9.3e-13  Score=122.13  Aligned_cols=181  Identities=15%  Similarity=0.186  Sum_probs=129.8

Q ss_pred             cccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCc
Q 021300           69 VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF  148 (314)
Q Consensus        69 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~  148 (314)
                      ..|++.++.|.++|++++++.+|+.+++....                     ..+.     .....|++++|+......
T Consensus        76 ~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk---------------------~~~~-----~~~~~G~~~~~~~~~~~~  129 (404)
T 1gpj_A           76 KRGSEAVRHLFRVASGLESMMVGEQEILRQVK---------------------KAYD-----RAARLGTLDEALKIVFRR  129 (404)
T ss_dssp             EEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHH---------------------HHHH-----HHHHHTCCCHHHHHHHHH
T ss_pred             ecCchHhhhheeeccCCCCCcCCcchhHHHHH---------------------HHHH-----HHHHcCCchHHHHHHHHH
Confidence            57999999999999999999999987421000                     0000     002346788888888888


Q ss_pred             eEECCCCCCcccccccchhhhhhhhhhHhcCC---CCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHH
Q 021300          149 VVRIPEGTPLDATAPLLCAGITVYSPLRFYGL---DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAI  224 (314)
Q Consensus       149 ~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~---~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~  224 (314)
                      ++.+|+.++.+.++. ..+..++|.++.....   -.+|++|+|+|+|.+|.++++.++..|+ +|+++.++.++.++++
T Consensus       130 a~~~~k~v~~~~~~~-~~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la  208 (404)
T 1gpj_A          130 AINLGKRAREETRIS-EGAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELA  208 (404)
T ss_dssp             HHHHHHHHHHHSSTT-CSCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH
T ss_pred             HhhhhccCcchhhhc-CCCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence            888888887776653 3455667776643321   2589999999999999999999999998 8999999988777888


Q ss_pred             HHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHH--HHHHh--h--ccCCEEEEEcCC
Q 021300          225 ERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM--PLIGL--L--KSQGKLVLVGAP  280 (314)
Q Consensus       225 ~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~--~~~~~--l--~~~G~~v~~G~~  280 (314)
                      +++|++. ++..+   +.+...++|+|+++++....+.  ..+..  +  +++|.+++++..
T Consensus       209 ~~~g~~~-~~~~~---l~~~l~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia  266 (404)
T 1gpj_A          209 RDLGGEA-VRFDE---LVDHLARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIA  266 (404)
T ss_dssp             HHHTCEE-CCGGG---HHHHHHTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred             HHcCCce-ecHHh---HHHHhcCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEcc
Confidence            8899863 33322   3334468999999998654332  45555  4  557777777664

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.10  E-value=4.9e-10  Score=96.38  Aligned_cols=172  Identities=12%  Similarity=0.030  Sum_probs=108.6

Q ss_pred             CCCCCEEEeccc------ccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcc--
Q 021300           88 FKVGDKVGVGCM------VGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLD--  159 (314)
Q Consensus        88 ~~~Gd~V~~~~~------~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~--  159 (314)
                      +++||+|++.+.      .-.||.|.+|..|..+.|......           .|...      +..+++.|+.....  
T Consensus         4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~~-----------~G~~~------~~~~~~~p~~~~~~~~   66 (248)
T 2yvl_A            4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGKP-----------EGVKI------NGFEVYRPTLEEIILL   66 (248)
T ss_dssp             CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTCC-----------TTEEE------TTEEEECCCHHHHHHH
T ss_pred             CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCCC-----------CCCEE------EEEEEeCCCHHHHHHh
Confidence            889999998762      347899999999999998753211           12221      23344444322111  


Q ss_pred             ---cccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCC--cE
Q 021300          160 ---ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGA--DS  231 (314)
Q Consensus       160 ---~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga--~~  231 (314)
                         ..+.+... ..+...+.... ++++++||.+|+| .|..+..+++. +.+++.++.+++..+.+.+.   .+.  ..
T Consensus        67 ~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~vldiG~G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~  142 (248)
T 2yvl_A           67 GFERKTQIIYP-KDSFYIALKLN-LNKEKRVLEFGTG-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNV  142 (248)
T ss_dssp             TSCCSSCCCCH-HHHHHHHHHTT-CCTTCEEEEECCT-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTE
T ss_pred             cCcCCCCcccc-hhHHHHHHhcC-CCCCCEEEEeCCC-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcE
Confidence               11111112 22233444443 7899999999998 59899999998 88999999998776555433   242  12


Q ss_pred             EecCCCHHHHHHHcCCccEEEEccCCc-ccHHHHHHhhccCCEEEEEcCC
Q 021300          232 FLVSRDQDEMQAAMGTMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       232 ~v~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      -+...+........+.||+|+.+.+.. ..+..+.+.|+++|+++.....
T Consensus       143 ~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~  192 (248)
T 2yvl_A          143 KFFNVDFKDAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLPT  192 (248)
T ss_dssp             EEECSCTTTSCCCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred             EEEEcChhhcccCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            122222111000124699999988766 6789999999999999988653

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.92  E-value=7.1e-09  Score=94.58  Aligned_cols=116  Identities=19%  Similarity=0.198  Sum_probs=85.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-EEecCCCHHHHHHHcCCccEEEEccCCccc-
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-  260 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~-~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~-  260 (314)
                      ++++|+|+|+|++|+++++.++.+|++|+++++++++.+.+.+.++.. .+++.. .+.+.+...++|++|++++.... 
T Consensus       166 ~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~DvVI~~~~~~~~~  244 (361)
T 1pjc_A          166 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSN-SAEIETAVAEADLLIGAVLVPGRR  244 (361)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECC-HHHHHHHHHTCSEEEECCCCTTSS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCC-HHHHHHHHcCCCEEEECCCcCCCC
Confidence            349999999999999999999999999999999988876665433322 133333 33333444589999999986542 


Q ss_pred             -----HHHHHHhhccCCEEEEEcCCCC-------CcccchhhhhcCceeEe
Q 021300          261 -----LMPLIGLLKSQGKLVLVGAPEK-------PLELPAFSLLMGEEEDS  299 (314)
Q Consensus       261 -----~~~~~~~l~~~G~~v~~G~~~~-------~~~~~~~~~~~~~~~i~  299 (314)
                           ....++.|+++|+++.++...+       +.+++...+..++.++.
T Consensus       245 ~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~  295 (361)
T 1pjc_A          245 APILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHY  295 (361)
T ss_dssp             CCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEE
T ss_pred             CCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEE
Confidence                 5678899999999999997653       34566556666777765

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.92  E-value=8.5e-09  Score=94.34  Aligned_cols=117  Identities=17%  Similarity=0.228  Sum_probs=82.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc---
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~---  259 (314)
                      ++++|+|+|+|.+|+.+++.++.+|++|+++++++++.+.+.+.+|++...+..+.+.+.+...++|+++++++...   
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~  244 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKA  244 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC------
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCcccc
Confidence            46999999999999999999999999999999998887777666887654444455555555568999999998653   


Q ss_pred             ---cHHHHHHhhccCCEEEEEcCCCC-------CcccchhhhhcCceeEe
Q 021300          260 ---PLMPLIGLLKSQGKLVLVGAPEK-------PLELPAFSLLMGEEEDS  299 (314)
Q Consensus       260 ---~~~~~~~~l~~~G~~v~~G~~~~-------~~~~~~~~~~~~~~~i~  299 (314)
                         .....++.|+++|+++.++...+       +.+++...+..++..+.
T Consensus       245 ~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~  294 (369)
T 2eez_A          245 PKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHY  294 (369)
T ss_dssp             -CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEE
T ss_pred             chhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEE
Confidence               25778999999999999998653       33444444445555544

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.90  E-value=8.1e-09  Score=94.71  Aligned_cols=117  Identities=20%  Similarity=0.191  Sum_probs=87.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc-
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-  260 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~-  260 (314)
                      -+|++|+|+|+|.+|+.+++.++.+|++|+++++++++.+.+.+.+|++...+......+.+...++|+|+++++.+.. 
T Consensus       166 l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~~  245 (377)
T 2vhw_A          166 VEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGAK  245 (377)
T ss_dssp             BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTSC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCCC
Confidence            3689999999999999999999999999999999998877776668876333333344444555679999999976543 


Q ss_pred             -----HHHHHHhhccCCEEEEEcCCC-------CCcccchhhhhcCceeE
Q 021300          261 -----LMPLIGLLKSQGKLVLVGAPE-------KPLELPAFSLLMGEEED  298 (314)
Q Consensus       261 -----~~~~~~~l~~~G~~v~~G~~~-------~~~~~~~~~~~~~~~~i  298 (314)
                           ....++.|+++|+++.+|...       .+.+++...+..++..+
T Consensus       246 t~~li~~~~l~~mk~g~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i  295 (377)
T 2vhw_A          246 APKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLF  295 (377)
T ss_dssp             CCCCBCHHHHTTSCTTCEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEE
T ss_pred             CcceecHHHHhcCCCCcEEEEEecCCCCccccccCCCCCCCEEEECCEEE
Confidence                 578899999999999999643       24444444444555554

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.78  E-value=4.5e-08  Score=89.97  Aligned_cols=117  Identities=17%  Similarity=0.160  Sum_probs=85.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCC----------------------HH
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRD----------------------QD  239 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~----------------------~~  239 (314)
                      +|++|+|+|+|.+|+.++++++.+|++|+++++++.+.+.+ +++|++.+ ++..+                      .+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~-~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQV-ESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH-HHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            78999999999999999999999999998988888777555 56998754 22211                      12


Q ss_pred             HHHHHcCCccEEEEcc---CCcc--c-HHHHHHhhccCCEEEEEcCCC-CCcc--cchhhhhcCceeEee
Q 021300          240 EMQAAMGTMDGIIDTV---SAVH--P-LMPLIGLLKSQGKLVLVGAPE-KPLE--LPAFSLLMGEEEDSW  300 (314)
Q Consensus       240 ~~~~~~~~~d~v~d~~---g~~~--~-~~~~~~~l~~~G~~v~~G~~~-~~~~--~~~~~~~~~~~~i~~  300 (314)
                      .+.+...++|+|++++   |...  . ....++.|++++.++.++... +..+  ++...+..+++++.+
T Consensus       250 ~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g  319 (384)
T 1l7d_A          250 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVG  319 (384)
T ss_dssp             HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEEC
T ss_pred             HHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEEEE
Confidence            2455667899999999   5322  2 377899999999999999643 3332  344455667777763

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.66  E-value=1.2e-07  Score=89.37  Aligned_cols=117  Identities=20%  Similarity=0.222  Sum_probs=88.9

Q ss_pred             hhhhhhhhHhcC-CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcC
Q 021300          168 GITVYSPLRFYG-LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG  246 (314)
Q Consensus       168 ~~ta~~~l~~~~-~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~  246 (314)
                      ..++|.++.+.. ...+|++|+|+|.|.+|..+++.++.+|++|+++++++.+.+.+ +++|++. ++   .   .+...
T Consensus       257 ~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A-~~~Ga~~-~~---l---~e~l~  328 (494)
T 3ce6_A          257 RHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQA-MMEGFDV-VT---V---EEAIG  328 (494)
T ss_dssp             HHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEE-CC---H---HHHGG
T ss_pred             hhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCEE-ec---H---HHHHh
Confidence            345566654332 35899999999999999999999999999999999988766444 5789863 22   2   23346


Q ss_pred             CccEEEEccCCcccHH-HHHHhhccCCEEEEEcCCCCCcccchhhhhcC
Q 021300          247 TMDGIIDTVSAVHPLM-PLIGLLKSQGKLVLVGAPEKPLELPAFSLLMG  294 (314)
Q Consensus       247 ~~d~v~d~~g~~~~~~-~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~  294 (314)
                      ++|+|++++++...+. ..++.|+++|+++.+|....  +++...+..+
T Consensus       329 ~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~~--eId~~aL~~~  375 (494)
T 3ce6_A          329 DADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDN--EIDMAGLERS  375 (494)
T ss_dssp             GCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSGG--GBCHHHHHHT
T ss_pred             CCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCCC--ccCHHHHHHh
Confidence            7999999999877565 78999999999999998543  4566555543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.59  E-value=2.9e-07  Score=84.96  Aligned_cols=117  Identities=20%  Similarity=0.185  Sum_probs=83.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCC-------------CHH-------HH
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSR-------------DQD-------EM  241 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v-~~~-------------~~~-------~~  241 (314)
                      +|.+|+|+|+|.+|+.++++++.+|++|+++++++++.+.+ +++|++.+. +..             ..+       .+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            58999999999999999999999999999999998877665 678987542 111             111       23


Q ss_pred             HHHcCCccEEEEccCCc-----c-cHHHHHHhhccCCEEEEEcCC-CCCcccchh-h--hhcCceeEee
Q 021300          242 QAAMGTMDGIIDTVSAV-----H-PLMPLIGLLKSQGKLVLVGAP-EKPLELPAF-S--LLMGEEEDSW  300 (314)
Q Consensus       242 ~~~~~~~d~v~d~~g~~-----~-~~~~~~~~l~~~G~~v~~G~~-~~~~~~~~~-~--~~~~~~~i~~  300 (314)
                      .+...++|+||++++.+     . .....++.|++++.++.++.. ++..++... +  +..++.++..
T Consensus       250 ~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g  318 (401)
T 1x13_A          250 AAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIG  318 (401)
T ss_dssp             HHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSCEEEC
T ss_pred             HHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCEEEEe
Confidence            44455799999995321     2 236789999999999999975 344444321 2  4556666663

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.46  E-value=1.9e-07  Score=73.47  Aligned_cols=107  Identities=18%  Similarity=0.143  Sum_probs=79.8

Q ss_pred             hhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCc
Q 021300          169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM  248 (314)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~  248 (314)
                      ..++.+++.... ..+.+++|+|+|.+|...++.++..|++++++.+++++.+++.++++.+.. ...+.   .+...++
T Consensus         7 sv~~~a~~~~~~-~~~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~-~~~~~---~~~~~~~   81 (144)
T 3oj0_A            7 SIPSIVYDIVRK-NGGNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYV-LINDI---DSLIKNN   81 (144)
T ss_dssp             SHHHHHHHHHHH-HCCCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEE-ECSCH---HHHHHTC
T ss_pred             cHHHHHHHHHHh-ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceE-eecCH---HHHhcCC
Confidence            445556554442 458999999999999999999988899988999999988888888886533 33332   2334579


Q ss_pred             cEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       249 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      |+|+.+++....... ...+++++.++.++.+.
T Consensus        82 Divi~at~~~~~~~~-~~~l~~g~~vid~~~p~  113 (144)
T 3oj0_A           82 DVIITATSSKTPIVE-ERSLMPGKLFIDLGNPP  113 (144)
T ss_dssp             SEEEECSCCSSCSBC-GGGCCTTCEEEECCSSC
T ss_pred             CEEEEeCCCCCcEee-HHHcCCCCEEEEccCCc
Confidence            999999987643222 26788999999998864

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.36  E-value=1.6e-06  Score=78.79  Aligned_cols=98  Identities=19%  Similarity=0.209  Sum_probs=76.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecC-------------------CCHHHHHH
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS-------------------RDQDEMQA  243 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~-------------------~~~~~~~~  243 (314)
                      ++.+|+|+|+|.+|+.+++.++.+|++|+++++++++.+++ +++|++.+...                   ...+.+.+
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~-~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQV-RSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHH-HHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            68999999999999999999999999999999999888666 56887643210                   01123445


Q ss_pred             HcCCccEEEEccCCc------ccHHHHHHhhccCCEEEEEcCCC
Q 021300          244 AMGTMDGIIDTVSAV------HPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       244 ~~~~~d~v~d~~g~~------~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      ....+|+||.++..+      -.....++.|++++.++.++...
T Consensus       262 ~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~  305 (381)
T 3p2y_A          262 AITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGET  305 (381)
T ss_dssp             HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGG
T ss_pred             HHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCC
Confidence            567899999986321      13578999999999999998754

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.35  E-value=3.5e-06  Score=77.13  Aligned_cols=97  Identities=21%  Similarity=0.259  Sum_probs=74.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEec-------------CCC----------HH
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV-------------SRD----------QD  239 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~-------------~~~----------~~  239 (314)
                      ++.+|+|+|+|.+|+.++++++.+|++|+++++++.+.+.+ +++|++.+..             +..          ..
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~-~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQV-ASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHH-HHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            67999999999999999999999999999999998877665 5688764321             110          12


Q ss_pred             HHHHHcCCccEEEEccCCc------ccHHHHHHhhccCCEEEEEcCC
Q 021300          240 EMQAAMGTMDGIIDTVSAV------HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       240 ~~~~~~~~~d~v~d~~g~~------~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      .+.+...++|+||.++..+      -.....++.|+++..++.++..
T Consensus       268 ~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d  314 (405)
T 4dio_A          268 LVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVE  314 (405)
T ss_dssp             HHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGG
T ss_pred             HHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCC
Confidence            3444556899999986322      1357899999999999999863

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.28  E-value=1.7e-06  Score=68.77  Aligned_cols=99  Identities=10%  Similarity=0.098  Sum_probs=69.3

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHH-cCCccEEEEccC
Q 021300          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVS  256 (314)
Q Consensus       179 ~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v-~~~~~~~~~~~-~~~~d~v~d~~g  256 (314)
                      ....++++++|+|+|.+|...++.++..|.+|+++++++++.+.+.++.|...+. +..+++.+.+. ..++|+||.+++
T Consensus        14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           14 SKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTN   93 (155)
T ss_dssp             ---CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred             hcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC
Confidence            3347889999999999999999999999999999999988765543245665432 33344544443 347999999999


Q ss_pred             CcccHHHHHHhhcc-CCEEEEE
Q 021300          257 AVHPLMPLIGLLKS-QGKLVLV  277 (314)
Q Consensus       257 ~~~~~~~~~~~l~~-~G~~v~~  277 (314)
                      +......+...++. +|....+
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~iv  115 (155)
T 2g1u_A           94 DDSTNFFISMNARYMFNVENVI  115 (155)
T ss_dssp             CHHHHHHHHHHHHHTSCCSEEE
T ss_pred             CcHHHHHHHHHHHHHCCCCeEE
Confidence            87655556666665 5533333

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.27  E-value=8.4e-06  Score=61.04  Aligned_cols=95  Identities=17%  Similarity=0.227  Sum_probs=69.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCcE-EecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~ga~~-~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      .+.+++|+|+|.+|..+++.+...| .+++++++++++.+.+. ..+... ..+..+.+.+.+...++|+||++++....
T Consensus         4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~   82 (118)
T 3ic5_A            4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFLT   82 (118)
T ss_dssp             TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGGH
T ss_pred             CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchhh
Confidence            4568999999999999999999999 79999999988776664 456543 34556667777777899999999986653


Q ss_pred             HHHHHHhhccCCEEEEEc
Q 021300          261 LMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       261 ~~~~~~~l~~~G~~v~~G  278 (314)
                      ......+.+.+-.++.+.
T Consensus        83 ~~~~~~~~~~g~~~~~~~  100 (118)
T 3ic5_A           83 PIIAKAAKAAGAHYFDLT  100 (118)
T ss_dssp             HHHHHHHHHTTCEEECCC
T ss_pred             HHHHHHHHHhCCCEEEec
Confidence            333344445555666554

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=98.26  E-value=1.1e-05  Score=74.23  Aligned_cols=111  Identities=18%  Similarity=0.212  Sum_probs=83.3

Q ss_pred             hhhhHhc-CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccE
Q 021300          172 YSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG  250 (314)
Q Consensus       172 ~~~l~~~-~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~  250 (314)
                      +.++.+. +..-.|++++|+|.|.+|..+++.++.+|++|+++++++.+..++ ...|... .      .+.++....|+
T Consensus       207 ~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A-~~~G~~v-~------~Leeal~~ADI  278 (435)
T 3gvp_A          207 LDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQA-CMDGFRL-V------KLNEVIRQVDI  278 (435)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEE-C------CHHHHTTTCSE
T ss_pred             HHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHH-HHcCCEe-c------cHHHHHhcCCE
Confidence            3344333 334689999999999999999999999999999998887655444 3556532 1      13456678999


Q ss_pred             EEEccCCcccHH-HHHHhhccCCEEEEEcCCCCCcccchhh
Q 021300          251 IIDTVSAVHPLM-PLIGLLKSQGKLVLVGAPEKPLELPAFS  290 (314)
Q Consensus       251 v~d~~g~~~~~~-~~~~~l~~~G~~v~~G~~~~~~~~~~~~  290 (314)
                      ++.|.|+...+. ..++.|++++.++.+|....+.+++...
T Consensus       279 Vi~atgt~~lI~~e~l~~MK~gailINvgrg~~EId~~~L~  319 (435)
T 3gvp_A          279 VITCTGNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVASLR  319 (435)
T ss_dssp             EEECSSCSCSBCHHHHHHSCTTEEEEECSSTTTTBTGGGGC
T ss_pred             EEECCCCcccCCHHHHHhcCCCcEEEEecCCCccCCHHHHH
Confidence            999988766555 8999999999999999875555555443

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=98.24  E-value=1.6e-05  Score=70.04  Aligned_cols=100  Identities=19%  Similarity=0.285  Sum_probs=77.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~  261 (314)
                      -.|.+++|+|.|.+|..+++.++.+|++|+++.++.++.+.+ +++|++.+ +.   +.+.++...+|+|+.++.....-
T Consensus       153 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~-~~~g~~~~-~~---~~l~~~l~~aDvVi~~~p~~~i~  227 (293)
T 3d4o_A          153 IHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARI-AEMGMEPF-HI---SKAAQELRDVDVCINTIPALVVT  227 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTSEEE-EG---GGHHHHTTTCSEEEECCSSCCBC
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH-HHCCCeec-Ch---hhHHHHhcCCCEEEECCChHHhC
Confidence            578999999999999999999999999999999988765444 46787542 22   23445567899999999765434


Q ss_pred             HHHHHhhccCCEEEEEcCCCCCccc
Q 021300          262 MPLIGLLKSQGKLVLVGAPEKPLEL  286 (314)
Q Consensus       262 ~~~~~~l~~~G~~v~~G~~~~~~~~  286 (314)
                      ...+..|++++.++.++..+...++
T Consensus       228 ~~~l~~mk~~~~lin~ar~~~~~~~  252 (293)
T 3d4o_A          228 ANVLAEMPSHTFVIDLASKPGGTDF  252 (293)
T ss_dssp             HHHHHHSCTTCEEEECSSTTCSBCH
T ss_pred             HHHHHhcCCCCEEEEecCCCCCCCH
Confidence            5678899999999999875444443

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.21  E-value=7.3e-06  Score=71.46  Aligned_cols=101  Identities=20%  Similarity=0.255  Sum_probs=77.8

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHH-------HcCCccE
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQA-------AMGTMDG  250 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~-------~~~~~d~  250 (314)
                      -.|+++||.|+ +++|.+.++.+...|++|+++.++.++.+++.+++|.+..   .|-.+++.+.+       ..+++|+
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46889999987 9999999999999999999999999999999999885433   24444443332       2357999


Q ss_pred             EEEccCCc-------------------------ccHHHHHHhhccCCEEEEEcCCCC
Q 021300          251 IIDTVSAV-------------------------HPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       251 v~d~~g~~-------------------------~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      +++++|..                         ...+.+++.|+++|++|.+++..+
T Consensus       107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~  163 (273)
T 4fgs_A          107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAG  163 (273)
T ss_dssp             EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred             EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhh
Confidence            99999842                         124556778888999999987543

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=98.18  E-value=9.1e-07  Score=76.81  Aligned_cols=95  Identities=21%  Similarity=0.222  Sum_probs=68.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      .++.+||.+|+|. |..+..+++.. +.+++.++.++...+.+.+......++.. +...+....+.||+|+.. .....
T Consensus        84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~-d~~~~~~~~~~fD~v~~~-~~~~~  160 (269)
T 1p91_A           84 DKATAVLDIGCGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVA-SSHRLPFSDTSMDAIIRI-YAPCK  160 (269)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEEC-CTTSCSBCTTCEEEEEEE-SCCCC
T ss_pred             CCCCEEEEECCCC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEc-chhhCCCCCCceeEEEEe-CChhh
Confidence            6889999999988 88899999986 77999999998888766555432232222 211111112469999964 44456


Q ss_pred             HHHHHHhhccCCEEEEEcC
Q 021300          261 LMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       261 ~~~~~~~l~~~G~~v~~G~  279 (314)
                      +..+.+.|+++|+++.+..
T Consensus       161 l~~~~~~L~pgG~l~~~~~  179 (269)
T 1p91_A          161 AEELARVVKPGGWVITATP  179 (269)
T ss_dssp             HHHHHHHEEEEEEEEEEEE
T ss_pred             HHHHHHhcCCCcEEEEEEc
Confidence            9999999999999988854

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=98.11  E-value=2.5e-05  Score=69.10  Aligned_cols=101  Identities=18%  Similarity=0.279  Sum_probs=77.9

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      --.|.+++|+|+|.+|..+++.++.+|++|+++.++.++.+.+ +++|++. ++.   +.+.++...+|+|+.+++....
T Consensus       154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~-~~~g~~~-~~~---~~l~~~l~~aDvVi~~~p~~~i  228 (300)
T 2rir_A          154 TIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARI-TEMGLVP-FHT---DELKEHVKDIDICINTIPSMIL  228 (300)
T ss_dssp             CSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCEE-EEG---GGHHHHSTTCSEEEECCSSCCB
T ss_pred             CCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHCCCeE-Ech---hhHHHHhhCCCEEEECCChhhh
Confidence            3578999999999999999999999999999999998766544 4577643 222   2344566789999999986543


Q ss_pred             HHHHHHhhccCCEEEEEcCCCCCccc
Q 021300          261 LMPLIGLLKSQGKLVLVGAPEKPLEL  286 (314)
Q Consensus       261 ~~~~~~~l~~~G~~v~~G~~~~~~~~  286 (314)
                      -...++.|++++.++.++..+...++
T Consensus       229 ~~~~~~~mk~g~~lin~a~g~~~~~~  254 (300)
T 2rir_A          229 NQTVLSSMTPKTLILDLASRPGGTDF  254 (300)
T ss_dssp             CHHHHTTSCTTCEEEECSSTTCSBCH
T ss_pred             CHHHHHhCCCCCEEEEEeCCCCCcCH
Confidence            45678889999999999875544444

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=98.05  E-value=3.8e-05  Score=70.80  Aligned_cols=104  Identities=17%  Similarity=0.229  Sum_probs=79.1

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCC
Q 021300          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       178 ~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      .+..-.|++++|+|.|.+|..+++.++.+|++|+++.+++.+..+. ...|... ++      +.++....|+++.++|+
T Consensus       241 tg~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A-~~~G~~v-v~------LeElL~~ADIVv~atgt  312 (464)
T 3n58_A          241 TDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQA-AMDGFEV-VT------LDDAASTADIVVTTTGN  312 (464)
T ss_dssp             HCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHH-HHTTCEE-CC------HHHHGGGCSEEEECCSS
T ss_pred             cCCcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHH-HhcCcee-cc------HHHHHhhCCEEEECCCC
Confidence            3445789999999999999999999999999999998887654443 3456543 21      23455679999999987


Q ss_pred             cccH-HHHHHhhccCCEEEEEcCCCCCcccchh
Q 021300          258 VHPL-MPLIGLLKSQGKLVLVGAPEKPLELPAF  289 (314)
Q Consensus       258 ~~~~-~~~~~~l~~~G~~v~~G~~~~~~~~~~~  289 (314)
                      ...+ ...+..|++++.++.+|....+++.+.+
T Consensus       313 ~~lI~~e~l~~MK~GAILINvGRgdvEID~~aL  345 (464)
T 3n58_A          313 KDVITIDHMRKMKDMCIVGNIGHFDNEIQVAAL  345 (464)
T ss_dssp             SSSBCHHHHHHSCTTEEEEECSSSTTTBTCGGG
T ss_pred             ccccCHHHHhcCCCCeEEEEcCCCCcccCHHHH
Confidence            6544 6889999999999999986544444433

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=98.05  E-value=2.1e-05  Score=68.52  Aligned_cols=188  Identities=17%  Similarity=0.074  Sum_probs=103.2

Q ss_pred             eCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC--ceEECCCCCCc
Q 021300           81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPL  158 (314)
Q Consensus        81 vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~~p~~~~~  158 (314)
                      +|+....+++||+|++.... .+..+..+..|..-.+....+..      .......+...+.++..  .....|+...+
T Consensus        13 ~~~~~~~~~~gd~v~i~~~~-~~~~~~~~~~~~~~~~~~g~~~~------~~i~g~~~g~~~~~~~~~~~~~~~p~~~~~   85 (277)
T 1o54_A           13 VGKVADTLKPGDRVLLSFED-ESEFLVDLEKDKKLHTHLGIIDL------NEVFEKGPGEIIRTSAGKKGYILIPSLIDE   85 (277)
T ss_dssp             CCCGGGCCCTTCEEEEEETT-SCEEEEECCTTCEEEETTEEEEH------HHHTTSCTTCEEECTTCCEEEEECCCHHHH
T ss_pred             cccccCCCCCCCEEEEEECC-CcEEEEEEcCCCEEecCCceEEH------HHhcCCCCCcEEEEcCCcEEEEeCCCHHHH
Confidence            55666679999999875321 22222233333222222111111      01112234455555544  34445544332


Q ss_pred             cccccc---chhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCChhhHHHHHHH---cCC-
Q 021300          159 DATAPL---LCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIER---LGA-  229 (314)
Q Consensus       159 ~~aa~~---~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~--g~~vi~v~~~~~~~~~~~~~---~ga-  229 (314)
                      .+...-   ......+-..+.. ..++++++||-+|+|. |..+..+++..  +.+++.++.++...+.+.+.   .+. 
T Consensus        86 ~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~  163 (277)
T 1o54_A           86 IMNMKRRTQIVYPKDSSFIAMM-LDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLI  163 (277)
T ss_dssp             HHTCCC-CCCCCHHHHHHHHHH-TTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCG
T ss_pred             HhhccccCCccCHHHHHHHHHH-hCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC
Confidence            222100   0000111122333 3478999999999977 88888999885  46999999888766555333   343 


Q ss_pred             -cEEecCCCHHHHHHHc-CCccEEEEccCCc-ccHHHHHHhhccCCEEEEEcC
Q 021300          230 -DSFLVSRDQDEMQAAM-GTMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       230 -~~~v~~~~~~~~~~~~-~~~d~v~d~~g~~-~~~~~~~~~l~~~G~~v~~G~  279 (314)
                       ..-+...+...  ... +.||+|+-..... ..+..+.+.|+++|+++....
T Consensus       164 ~~v~~~~~d~~~--~~~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  214 (277)
T 1o54_A          164 ERVTIKVRDISE--GFDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCP  214 (277)
T ss_dssp             GGEEEECCCGGG--CCSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred             CCEEEEECCHHH--cccCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence             22222222211  122 3699999877655 568889999999999998865

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.02  E-value=5.3e-05  Score=61.71  Aligned_cols=96  Identities=15%  Similarity=0.173  Sum_probs=71.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHH--cCCccEEEEccCCc
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA--MGTMDGIIDTVSAV  258 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga~~~v-~~~~~~~~~~~--~~~~d~v~d~~g~~  258 (314)
                      .+++++|+|.|.+|..+++.++.. |.+|+++++++++.+.+ ++.|...+. |..+++.+.+.  ..++|+++.++++.
T Consensus        38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~-~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~  116 (183)
T 3c85_A           38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQH-RSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHH  116 (183)
T ss_dssp             TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH-HHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSH
T ss_pred             CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHH-HHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCCh
Confidence            367899999999999999999998 99999999999887665 467876544 55566666665  45799999999876


Q ss_pred             ccHHHHHHhhcc---CCEEEEEcC
Q 021300          259 HPLMPLIGLLKS---QGKLVLVGA  279 (314)
Q Consensus       259 ~~~~~~~~~l~~---~G~~v~~G~  279 (314)
                      .....+...++.   ..+++....
T Consensus       117 ~~~~~~~~~~~~~~~~~~ii~~~~  140 (183)
T 3c85_A          117 QGNQTALEQLQRRNYKGQIAAIAE  140 (183)
T ss_dssp             HHHHHHHHHHHHTTCCSEEEEEES
T ss_pred             HHHHHHHHHHHHHCCCCEEEEEEC
Confidence            544444444444   456665543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.97  E-value=4.9e-05  Score=65.45  Aligned_cols=101  Identities=19%  Similarity=0.267  Sum_probs=73.8

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHH-------HcCCccE
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQA-------AMGTMDG  250 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~-------~~~~~d~  250 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|+++.+++++.+++.++++.+..   .|-.+++.+.+       ..+.+|+
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            35789999987 9999999999999999999999999888888877765432   24445443332       2357999


Q ss_pred             EEEccCCcc-------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300          251 IIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       251 v~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      +++++|...                         ..+.+++.++++|+++.+++..+
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~  142 (255)
T 4eso_A           86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVAD  142 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhh
Confidence            999987421                         12334455667899999987543

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.94  E-value=3.5e-05  Score=67.65  Aligned_cols=101  Identities=15%  Similarity=0.228  Sum_probs=72.8

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcE-EecCCCHHHHHHHcCCccEEEE
Q 021300          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS-FLVSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       178 ~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~-~v~~~~~~~~~~~~~~~d~v~d  253 (314)
                      ..++++|++||.+|+|+.++.++.+++..|++|+.++.+++..+.+.+.   .|.+. -+...+...+  -.+.||+|+.
T Consensus       117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l--~d~~FDvV~~  194 (298)
T 3fpf_A          117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVI--DGLEFDVLMV  194 (298)
T ss_dssp             HTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGG--GGCCCSEEEE
T ss_pred             HcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhC--CCCCcCEEEE
Confidence            3458999999999999877888888888899999999999877555433   35321 1222222212  1467999997


Q ss_pred             ccCCc---ccHHHHHHhhccCCEEEEEcCC
Q 021300          254 TVSAV---HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       254 ~~g~~---~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      +....   ..+..+.+.|++||+++.....
T Consensus       195 ~a~~~d~~~~l~el~r~LkPGG~Lvv~~~~  224 (298)
T 3fpf_A          195 AALAEPKRRVFRNIHRYVDTETRIIYRTYT  224 (298)
T ss_dssp             CTTCSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred             CCCccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence            66543   3588899999999999987643

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.91  E-value=2.9e-05  Score=72.59  Aligned_cols=100  Identities=17%  Similarity=0.254  Sum_probs=75.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~  261 (314)
                      -.|++++|.|+|.+|..+++.++..|++|+++.+++.+..++. ..+++. .+      ..+....+|+++++.|....+
T Consensus       263 L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa-~~g~dv-~~------lee~~~~aDvVi~atG~~~vl  334 (488)
T 3ond_A          263 IAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQAT-MEGLQV-LT------LEDVVSEADIFVTTTGNKDII  334 (488)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE-CC------GGGTTTTCSEEEECSSCSCSB
T ss_pred             ccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HhCCcc-CC------HHHHHHhcCEEEeCCCChhhh
Confidence            5799999999999999999999999999999988887665554 456532 11      123445799999999976655


Q ss_pred             -HHHHHhhccCCEEEEEcCCCCCcccchh
Q 021300          262 -MPLIGLLKSQGKLVLVGAPEKPLELPAF  289 (314)
Q Consensus       262 -~~~~~~l~~~G~~v~~G~~~~~~~~~~~  289 (314)
                       ...++.|++++.++.+|....+..++..
T Consensus       335 ~~e~l~~mk~gaiVvNaG~~~~Ei~~~~l  363 (488)
T 3ond_A          335 MLDHMKKMKNNAIVCNIGHFDNEIDMLGL  363 (488)
T ss_dssp             CHHHHTTSCTTEEEEESSSTTTTBTHHHH
T ss_pred             hHHHHHhcCCCeEEEEcCCCCcccchHHH
Confidence             4488999999999999986433443333

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.80  E-value=0.00035  Score=59.66  Aligned_cols=75  Identities=21%  Similarity=0.266  Sum_probs=58.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe---cCCCHHHHHH-------HcCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL---VSRDQDEMQA-------AMGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v---~~~~~~~~~~-------~~~~~d~v  251 (314)
                      .|.++||.|+ +++|.+.++.+...|++|+++.++.++.+++.++++.+...   |-.+++.+.+       ..+++|++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            5788999987 99999999999999999999999998888888887765433   3344433332       23579999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      |+++|.
T Consensus        85 v~nAg~   90 (247)
T 3rwb_A           85 VNNASI   90 (247)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999984

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.79  E-value=0.00035  Score=60.87  Aligned_cols=101  Identities=13%  Similarity=0.201  Sum_probs=72.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHH-------cCCccE
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDG  250 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~-------~~~~d~  250 (314)
                      -.+.++||.|+ |++|.+.++.+...|++|+++.+++++.+++.++++....   .|-.+++.+.++       .+++|+
T Consensus        25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            35788999987 9999999999999999999999999888888777775433   244454433322       247999


Q ss_pred             EEEccCCcc-------------------------cHHHHHHhhcc--CCEEEEEcCCCC
Q 021300          251 IIDTVSAVH-------------------------PLMPLIGLLKS--QGKLVLVGAPEK  282 (314)
Q Consensus       251 v~d~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~G~~~~  282 (314)
                      +|+++|...                         ..+.+++.|++  +|+++.+++..+
T Consensus       105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  163 (277)
T 4dqx_A          105 LVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTA  163 (277)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGG
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhh
Confidence            999998320                         12344555543  579999987543

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.78  E-value=0.00035  Score=60.14  Aligned_cols=100  Identities=13%  Similarity=0.202  Sum_probs=71.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHH-------HcCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQA-------AMGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~-------~~~~~  248 (314)
                      +|+++||.|+ +++|.+.++.+...|++|+++.+++++.+++.+++   |.+..   .|-.+++.+.+       ..+..
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4788999987 99999999999999999999999988776665544   54433   24444543332       23579


Q ss_pred             cEEEEccCCc--------------------------ccHHHHHHhhc--cCCEEEEEcCCCC
Q 021300          249 DGIIDTVSAV--------------------------HPLMPLIGLLK--SQGKLVLVGAPEK  282 (314)
Q Consensus       249 d~v~d~~g~~--------------------------~~~~~~~~~l~--~~G~~v~~G~~~~  282 (314)
                      |++++++|..                          ...+.+++.|.  .+|++|.+++..+
T Consensus        86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g  147 (254)
T 4fn4_A           86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAG  147 (254)
T ss_dssp             CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhh
Confidence            9999999821                          12344566663  4699999987543

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.78  E-value=0.00035  Score=60.09  Aligned_cols=75  Identities=19%  Similarity=0.343  Sum_probs=58.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHH-------cCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~-------~~~~d~v  251 (314)
                      .|.++||.|+ |++|...++.+...|++|+++.++.++.+++.++++....   .|-.+++.+.++       .+++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   86 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL   86 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5788999997 9999999999999999999999999888888887765432   244555433332       2479999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      |+++|.
T Consensus        87 v~~Ag~   92 (259)
T 4e6p_A           87 VNNAAL   92 (259)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999984

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.77  E-value=0.00028  Score=61.35  Aligned_cols=101  Identities=17%  Similarity=0.243  Sum_probs=71.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHH-------cCCccE
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDG  250 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~-------~~~~d~  250 (314)
                      ..+.++||.|+ +++|.+.++.+...|++|+++.++.++.+++.++++.+..   .|-.+++.+.++       .+++|+
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            35678899887 9999999999999999999999999888888887764322   244555433332       247999


Q ss_pred             EEEccCCcc--------------------------cHHHHHHhhcc----CCEEEEEcCCCC
Q 021300          251 IIDTVSAVH--------------------------PLMPLIGLLKS----QGKLVLVGAPEK  282 (314)
Q Consensus       251 v~d~~g~~~--------------------------~~~~~~~~l~~----~G~~v~~G~~~~  282 (314)
                      +|+++|...                          ....+++.|+.    +|+++.+++..+
T Consensus       106 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~  167 (272)
T 4dyv_A          106 LFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISA  167 (272)
T ss_dssp             EEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSST
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhh
Confidence            999988421                          12334455543    589999987644

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.77  E-value=0.00032  Score=60.71  Aligned_cols=101  Identities=22%  Similarity=0.324  Sum_probs=71.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe---cCCCHHHHHHH-------cCCccE
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL---VSRDQDEMQAA-------MGTMDG  250 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v---~~~~~~~~~~~-------~~~~d~  250 (314)
                      -.|.++||.|+ |++|.+.++.+...|++|+++.++.++.+++.++++.+..+   |-.+++.+.++       .+++|+
T Consensus        25 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (266)
T 3grp_A           25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI  104 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            35788999987 99999999999999999999999998888888888765433   44444433332       247999


Q ss_pred             EEEccCCcc-------------------------cHHHHHHhh--ccCCEEEEEcCCCC
Q 021300          251 IIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAPEK  282 (314)
Q Consensus       251 v~d~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~G~~~~  282 (314)
                      +|+++|...                         ....+++.|  +..|+++.+++..+
T Consensus       105 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~  163 (266)
T 3grp_A          105 LVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVG  163 (266)
T ss_dssp             EEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC--
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHH
Confidence            999998421                         023344444  34689999987543

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.76  E-value=9.4e-05  Score=68.13  Aligned_cols=105  Identities=14%  Similarity=0.174  Sum_probs=78.6

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc
Q 021300          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (314)
Q Consensus       179 ~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~  258 (314)
                      ...-.|.+|+|+|.|.+|...++.++.+|++|+++++++.+..++ ...|....       .+.++....|+++.+.++.
T Consensus       206 g~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A-~~~G~~~~-------sL~eal~~ADVVilt~gt~  277 (436)
T 3h9u_A          206 DVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQA-AMEGYQVL-------LVEDVVEEAHIFVTTTGND  277 (436)
T ss_dssp             CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEEC-------CHHHHTTTCSEEEECSSCS
T ss_pred             CCcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHH-HHhCCeec-------CHHHHHhhCCEEEECCCCc
Confidence            334579999999999999999999999999999998887655444 35565431       2445667899999988865


Q ss_pred             ccHH-HHHHhhccCCEEEEEcCCCCCcccchhhhhc
Q 021300          259 HPLM-PLIGLLKSQGKLVLVGAPEKPLELPAFSLLM  293 (314)
Q Consensus       259 ~~~~-~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~  293 (314)
                      ..+. ..++.|+++..++.+|..  +.+++...+..
T Consensus       278 ~iI~~e~l~~MK~gAIVINvgRg--~vEID~~~L~~  311 (436)
T 3h9u_A          278 DIITSEHFPRMRDDAIVCNIGHF--DTEIQVAWLKA  311 (436)
T ss_dssp             CSBCTTTGGGCCTTEEEEECSSS--GGGBCHHHHHH
T ss_pred             CccCHHHHhhcCCCcEEEEeCCC--CCccCHHHHHh
Confidence            5443 678889999999999853  44566555443

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.75  E-value=0.00029  Score=60.72  Aligned_cols=100  Identities=22%  Similarity=0.227  Sum_probs=70.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEEe---cCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSFL---VSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~v---~~~~~~~~~~~-------~~~~  248 (314)
                      .|+++||.|+ +++|.+.++.+...|++|++..+++++.++..+++   |.+...   |-.+++.+.++       .+++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV   87 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            5788999887 99999999999999999999999988766665444   544433   33444433322       3479


Q ss_pred             cEEEEccCCc-------------------------ccHHHHHHhhc---cCCEEEEEcCCCC
Q 021300          249 DGIIDTVSAV-------------------------HPLMPLIGLLK---SQGKLVLVGAPEK  282 (314)
Q Consensus       249 d~v~d~~g~~-------------------------~~~~~~~~~l~---~~G~~v~~G~~~~  282 (314)
                      |++++++|..                         ...+.+++.|.   .+|++|.+++..+
T Consensus        88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~  149 (255)
T 4g81_D           88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTS  149 (255)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhh
Confidence            9999999832                         12344566662   4689999987644

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.75  E-value=0.00073  Score=57.26  Aligned_cols=75  Identities=20%  Similarity=0.341  Sum_probs=57.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-CcEE-ecCCCHHHHHHHcC---CccEEEEccC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADSF-LVSRDQDEMQAAMG---TMDGIIDTVS  256 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-a~~~-v~~~~~~~~~~~~~---~~d~v~d~~g  256 (314)
                      +|.++||.|+ |.+|...++.+...|++|+++.+++++.+++.+++. .+.+ .|-.+++.+.+...   ++|++|+++|
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag   85 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCc
Confidence            5788999998 999999999999999999999999887777766654 3222 35556666555543   6899999988


Q ss_pred             C
Q 021300          257 A  257 (314)
Q Consensus       257 ~  257 (314)
                      .
T Consensus        86 ~   86 (244)
T 3d3w_A           86 V   86 (244)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.72  E-value=0.00031  Score=61.22  Aligned_cols=101  Identities=17%  Similarity=0.249  Sum_probs=72.0

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE---EecCCCHHHHHHH-------cCCccE
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG  250 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~---~v~~~~~~~~~~~-------~~~~d~  250 (314)
                      -.|.++||.|+ |++|.+.++.+...|++|+++.++.++.+++.++++...   ..|-.+++.+.++       .+++|+
T Consensus        27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            35788999887 999999999999999999999999988888877776432   2244555433322       347999


Q ss_pred             EEEccCCcc-------------------------cHHHHHHhh--ccCCEEEEEcCCCC
Q 021300          251 IIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAPEK  282 (314)
Q Consensus       251 v~d~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~G~~~~  282 (314)
                      +++++|...                         ..+.+++.|  +.+|+++.+++..+
T Consensus       107 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~  165 (277)
T 3gvc_A          107 LVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAG  165 (277)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGG
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh
Confidence            999998421                         123344445  45689999987543

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=97.69  E-value=0.00054  Score=58.39  Aligned_cols=75  Identities=21%  Similarity=0.340  Sum_probs=57.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE----EecCCCHHHHHHH------cCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS----FLVSRDQDEMQAA------MGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~----~v~~~~~~~~~~~------~~~~d~v  251 (314)
                      .+.++||.|+ |.+|...++.+...|++|+++++++++.+++.++++.+.    ..|-.+++.+.+.      .+++|++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   89 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL   89 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence            5678999997 999999999999999999999999887777766665432    1244555444333      2579999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      |+++|.
T Consensus        90 i~~Ag~   95 (254)
T 2wsb_A           90 VNSAGI   95 (254)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999884

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.68  E-value=0.00053  Score=58.42  Aligned_cols=77  Identities=16%  Similarity=0.261  Sum_probs=59.3

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe---cCCCHHHHHHHc---CCccEEEE
Q 021300          181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL---VSRDQDEMQAAM---GTMDGIID  253 (314)
Q Consensus       181 ~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v---~~~~~~~~~~~~---~~~d~v~d  253 (314)
                      ..++.++||.|+ |++|...++.+...|++|+++.++.++.+++.+++.....+   |-.+.+.+.++.   +++|++|+
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~   90 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVC   90 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence            367899999987 99999999999999999999999998888887777643322   444455444432   47999999


Q ss_pred             ccCC
Q 021300          254 TVSA  257 (314)
Q Consensus       254 ~~g~  257 (314)
                      ++|.
T Consensus        91 ~Ag~   94 (249)
T 3f9i_A           91 NAGI   94 (249)
T ss_dssp             CCC-
T ss_pred             CCCC
Confidence            9883

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.68  E-value=0.00047  Score=58.44  Aligned_cols=99  Identities=16%  Similarity=0.142  Sum_probs=69.1

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHH-------cCCccEEE
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGII  252 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~-------~~~~d~v~  252 (314)
                      +.++||.|+ |++|.+.++.+...|++|+++.++.++.+++.++++....   .|-.+++.+.++       .+.+|+++
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv   82 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL   82 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence            568999997 9999999999999999999999999888777777653322   244444433322       34799999


Q ss_pred             EccCCcc-------------------------cHHHHHHhhc-cCCEEEEEcCCCC
Q 021300          253 DTVSAVH-------------------------PLMPLIGLLK-SQGKLVLVGAPEK  282 (314)
Q Consensus       253 d~~g~~~-------------------------~~~~~~~~l~-~~G~~v~~G~~~~  282 (314)
                      +++|...                         ..+.+++.|+ .+|+++.+++..+
T Consensus        83 nnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~  138 (235)
T 3l6e_A           83 HCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAA  138 (235)
T ss_dssp             EECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEEC
T ss_pred             ECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHh
Confidence            9988421                         1233445553 4668988877543

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.68  E-value=0.00043  Score=59.37  Aligned_cols=75  Identities=24%  Similarity=0.378  Sum_probs=57.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHH-------cCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~-------~~~~d~v  251 (314)
                      .+.++||.|+ |++|.+.++.+...|++|+++.+++++.+++.++++....   .|-.+++.+.++       .+++|++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999997 9999999999999999999999998887777776654322   244555443332       2479999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      |+++|.
T Consensus        84 v~nAg~   89 (254)
T 1hdc_A           84 VNNAGI   89 (254)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.68  E-value=0.00091  Score=57.35  Aligned_cols=75  Identities=17%  Similarity=0.301  Sum_probs=58.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe---cCCCHHHHHHH-------cCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL---VSRDQDEMQAA-------MGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v---~~~~~~~~~~~-------~~~~d~v  251 (314)
                      .+.++||.|+ +++|.+.++.+...|++|+++.+++++.+++.++++....+   |-.+.+.+.++       .+.+|++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   87 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL   87 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4678999997 99999999999999999999999999888888887754322   44444433322       2479999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      |+++|.
T Consensus        88 i~~Ag~   93 (261)
T 3n74_A           88 VNNAGI   93 (261)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999874

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.67  E-value=0.00047  Score=59.88  Aligned_cols=100  Identities=15%  Similarity=0.197  Sum_probs=71.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHH-------cCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~-------~~~~d~v  251 (314)
                      .+.++||.|+ |++|...++.+...|++|+++.++.++.+++.++++....   .|-.+++.+.++       .+++|++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            4678999887 9999999999999999999999999888888777764332   244555443332       2479999


Q ss_pred             EEccCCcc-------------------------cHHHHHHhhc--cCCEEEEEcCCCC
Q 021300          252 IDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLVGAPEK  282 (314)
Q Consensus       252 ~d~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~G~~~~  282 (314)
                      |+++|...                         ....+++.++  ..|+++.+++..+
T Consensus        84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~  141 (281)
T 3m1a_A           84 VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGG  141 (281)
T ss_dssp             EECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccc
Confidence            99998421                         0333445553  3589999987543

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.66  E-value=0.00063  Score=58.25  Aligned_cols=99  Identities=18%  Similarity=0.274  Sum_probs=69.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe---cCCCHHHHHHH-------cCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL---VSRDQDEMQAA-------MGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v---~~~~~~~~~~~-------~~~~d~v  251 (314)
                      .|.++||.|+ |++|...++.+...|++|+++.+++++.+++.++++....+   |-.+++.+.++       .+.+|++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999987 99999999999999999999999988877777776644322   44444433322       2468999


Q ss_pred             EEccCCcc-------------------------cHHHHHHhhc-cCCEEEEEcCCC
Q 021300          252 IDTVSAVH-------------------------PLMPLIGLLK-SQGKLVLVGAPE  281 (314)
Q Consensus       252 ~d~~g~~~-------------------------~~~~~~~~l~-~~G~~v~~G~~~  281 (314)
                      |+++|...                         ....+++.|+ .+|+++.+++..
T Consensus        85 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~  140 (253)
T 1hxh_A           85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVS  140 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchh
Confidence            99998421                         1223444553 348999998754

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.65  E-value=0.00025  Score=62.98  Aligned_cols=109  Identities=13%  Similarity=0.189  Sum_probs=73.7

Q ss_pred             hhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC---hhhHHHHHHHcC----Cc-EEecCCCHHHHHH
Q 021300          173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS---PSKKSEAIERLG----AD-SFLVSRDQDEMQA  243 (314)
Q Consensus       173 ~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~---~~~~~~~~~~~g----a~-~~v~~~~~~~~~~  243 (314)
                      .+|...+.--.|.++||+|+|++|.+++..+...|+ +|+++.|+   .++.++++++++    .. .+++..+.+.+.+
T Consensus       143 ~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~  222 (315)
T 3tnl_A          143 RALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRK  222 (315)
T ss_dssp             HHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH
T ss_pred             HHHHHcCCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHh
Confidence            345443322468899999999999999999999999 89999999   777777766543    22 3345555455555


Q ss_pred             HcCCccEEEEccCCccc-----HHH-HHHhhccCCEEEEEcCCC
Q 021300          244 AMGTMDGIIDTVSAVHP-----LMP-LIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       244 ~~~~~d~v~d~~g~~~~-----~~~-~~~~l~~~G~~v~~G~~~  281 (314)
                      ....+|+||++++....     ... ....++++..++++-..+
T Consensus       223 ~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY~P  266 (315)
T 3tnl_A          223 EIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKP  266 (315)
T ss_dssp             HHHTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCCSS
T ss_pred             hhcCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEeccCC
Confidence            55689999999863210     011 234567777777775543

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.65  E-value=0.00074  Score=51.75  Aligned_cols=76  Identities=17%  Similarity=0.198  Sum_probs=57.8

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHH-cCCccEEEEccCCcc
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVH  259 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v-~~~~~~~~~~~-~~~~d~v~d~~g~~~  259 (314)
                      +.+++|+|+|.+|...++.+...|.+++++++++++.+.+.++++...+. +..+++.+.+. ..++|+++.+++...
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~   81 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEE   81 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCch
Confidence            45799999999999999999989999999999988877776666765432 33445554433 457999999998764

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.65  E-value=0.00054  Score=58.96  Aligned_cols=75  Identities=20%  Similarity=0.227  Sum_probs=56.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE---EecCCCHHHHHHHc-------CCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAAM-------GTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~---~v~~~~~~~~~~~~-------~~~d~v  251 (314)
                      .|.++||.|+ |++|...++.+...|++|+++++++++.+++.+++....   ..|-.+++.+.++.       +++|++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   85 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999997 999999999999999999999999887777766664321   23445554443332       479999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      |+++|.
T Consensus        86 v~~Ag~   91 (260)
T 1nff_A           86 VNNAGI   91 (260)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999883

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.64  E-value=0.00059  Score=59.10  Aligned_cols=75  Identities=15%  Similarity=0.259  Sum_probs=58.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE---EecCCCHHHHHHH-------cCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~---~v~~~~~~~~~~~-------~~~~d~v  251 (314)
                      .|.++||.|+ |++|.+.++.+...|++|+++.+++++.+++.++++...   ..|-.+++.+.++       .+.+|++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   89 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV   89 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5788999987 999999999999999999999999988888877776432   2344555433332       2479999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      ++++|.
T Consensus        90 v~nAg~   95 (271)
T 3tzq_B           90 DNNAAH   95 (271)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.63  E-value=0.00055  Score=58.86  Aligned_cols=101  Identities=13%  Similarity=0.221  Sum_probs=68.4

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCC-cE---EecCCCHHHHH-------HHc
Q 021300          183 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGA-DS---FLVSRDQDEMQ-------AAM  245 (314)
Q Consensus       183 ~g~~vlI~Ga-g--~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga-~~---~v~~~~~~~~~-------~~~  245 (314)
                      .|+++||.|+ |  ++|.+.++.+...|++|+++.++++..+++.+.   ++. +.   ..|-.+++.+.       +..
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV   84 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5789999996 4  799999999999999999999998766555443   332 21   13444544332       233


Q ss_pred             CCccEEEEccCCcc-----------------------------cHHHHHHhhccCCEEEEEcCCCCC
Q 021300          246 GTMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAPEKP  283 (314)
Q Consensus       246 ~~~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~G~~~~~  283 (314)
                      +.+|++++++|...                             ........++++|++|.+++..+.
T Consensus        85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~  151 (256)
T 4fs3_A           85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGE  151 (256)
T ss_dssp             CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGT
T ss_pred             CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccc
Confidence            57999999987320                             011233456778999999876543

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.63  E-value=0.00065  Score=56.67  Aligned_cols=97  Identities=7%  Similarity=0.082  Sum_probs=69.3

Q ss_pred             CEEEEEcC-ChHHHHHHHHHH-HCCCeEEEEeCChh-hHHHHHHHcC-CcE-EecCCCHHHHHHHcCCccEEEEccCCcc
Q 021300          185 MHVGVVGL-GGLGHVAVKFAK-AMGVKVTVISTSPS-KKSEAIERLG-ADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~-~~g~~vi~v~~~~~-~~~~~~~~~g-a~~-~v~~~~~~~~~~~~~~~d~v~d~~g~~~  259 (314)
                      .++||.|+ |.+|...++.+. ..|++|++++++++ +.+++.+... ... ..|-.+++.+.+...++|++|.++|...
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~n   85 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMESG   85 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCCH
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCCC
Confidence            46999997 999999998888 89999999999987 6555431212 222 2355667777777789999999998631


Q ss_pred             c-HHHHHHhhccC--CEEEEEcCCC
Q 021300          260 P-LMPLIGLLKSQ--GKLVLVGAPE  281 (314)
Q Consensus       260 ~-~~~~~~~l~~~--G~~v~~G~~~  281 (314)
                      . ...+++.++..  ++++.+++..
T Consensus        86 ~~~~~~~~~~~~~~~~~iv~iSs~~  110 (221)
T 3r6d_A           86 SDMASIVKALSRXNIRRVIGVSMAG  110 (221)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred             hhHHHHHHHHHhcCCCeEEEEeece
Confidence            1 45556666543  5899887654

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.63  E-value=0.00072  Score=58.34  Aligned_cols=100  Identities=22%  Similarity=0.356  Sum_probs=70.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHH-------cCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~-------~~~~d~v  251 (314)
                      .+.++||.|+ |++|.+.++.+...|++|+++.+++++.+++.++++.+..   .|-.+++.+.++       .+.+|++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            4678999997 9999999999999999999999999888777777653322   244555433332       2479999


Q ss_pred             EEccCCcc-------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300          252 IDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       252 ~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      |++.|...                         ..+.+++.++..|+++.+++...
T Consensus        85 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  140 (263)
T 2a4k_A           85 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG  140 (263)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchh
Confidence            99987321                         12223344433799999987654

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.62  E-value=0.001  Score=57.38  Aligned_cols=75  Identities=20%  Similarity=0.316  Sum_probs=54.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-----CCcEE---ecCCCHHHHHHH-------cC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GADSF---LVSRDQDEMQAA-------MG  246 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~-----ga~~~---v~~~~~~~~~~~-------~~  246 (314)
                      .+.++||.|+ |++|...++.+...|++|+++.+++++.+++.+++     +.+..   .|-.+++.+.++       .+
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4688999997 99999999999999999999999987766554443     43322   244555433332       24


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      ++|++|+++|.
T Consensus        92 ~id~lv~nAg~  102 (267)
T 1iy8_A           92 RIDGFFNNAGI  102 (267)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999873

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.62  E-value=0.00031  Score=61.28  Aligned_cols=75  Identities=20%  Similarity=0.257  Sum_probs=53.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC----Cc-E--EecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG----AD-S--FLVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g----a~-~--~v~~~~~~~~~~~-------~~~  247 (314)
                      .|.++||.|+ |++|.+.++.+...|++|+++.+++++.+++.+++.    .. .  ..|-.+++.+.++       .+.
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  111 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR  111 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5788999987 999999999999999999999999887766655542    11 1  1344555433322       357


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus       112 iD~lvnnAG~  121 (281)
T 4dry_A          112 LDLLVNNAGS  121 (281)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.62  E-value=0.00044  Score=58.39  Aligned_cols=99  Identities=17%  Similarity=0.243  Sum_probs=68.7

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC-cEEecCCCHHHHHHHcCCccEEEEccCCcc
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-DSFLVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga-~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~  259 (314)
                      -.|.+|||.|+ |.+|...++.+...|.+|+++++++++..++. ..+. ..+.-.-. +.+.+..+++|+||.++|...
T Consensus        19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~-~~~~~~~~~~Dl~-~~~~~~~~~~D~vi~~ag~~~   96 (236)
T 3e8x_A           19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR-ERGASDIVVANLE-EDFSHAFASIDAVVFAAGSGP   96 (236)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HTTCSEEEECCTT-SCCGGGGTTCSEEEECCCCCT
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH-hCCCceEEEcccH-HHHHHHHcCCCEEEECCCCCC
Confidence            35789999998 99999999999999999999999998876664 3465 44322111 334445568999999998431


Q ss_pred             -------------cHHHHHHhhcc--CCEEEEEcCCCC
Q 021300          260 -------------PLMPLIGLLKS--QGKLVLVGAPEK  282 (314)
Q Consensus       260 -------------~~~~~~~~l~~--~G~~v~~G~~~~  282 (314)
                                   ....+++.++.  .++++.+++...
T Consensus        97 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  134 (236)
T 3e8x_A           97 HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGT  134 (236)
T ss_dssp             TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred             CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCC
Confidence                         12334444432  378999988653

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.62  E-value=0.00068  Score=57.77  Aligned_cols=75  Identities=19%  Similarity=0.363  Sum_probs=57.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHH-------cCCccEEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAA-------MGTMDGIID  253 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~-------~~~~d~v~d  253 (314)
                      .+.++||.|+ |++|.+.++.+...|++|+++.+++++.+++.++++...+ .|-.+++.+.+.       .+.+|++|+
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn   83 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4678999997 9999999999999999999999998887777776664332 354555443332       246999999


Q ss_pred             ccCC
Q 021300          254 TVSA  257 (314)
Q Consensus       254 ~~g~  257 (314)
                      ++|.
T Consensus        84 ~Ag~   87 (245)
T 1uls_A           84 YAGI   87 (245)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9984

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.62  E-value=0.0011  Score=57.30  Aligned_cols=76  Identities=24%  Similarity=0.335  Sum_probs=55.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCcEE---ecCCCHHHHHHH-------cC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADSF---LVSRDQDEMQAA-------MG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----ga~~~---v~~~~~~~~~~~-------~~  246 (314)
                      -.+.++||.|+ |++|.+.++.+...|++|+++.+++++.+++.+++    +.+..   .|-.+++.+.++       .+
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   98 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            45788999997 99999999999999999999999987766655444    54322   244555433322       24


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      ++|++|+++|.
T Consensus        99 ~iD~lvnnAg~  109 (267)
T 1vl8_A           99 KLDTVVNAAGI  109 (267)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999884

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.61  E-value=0.00061  Score=58.91  Aligned_cols=100  Identities=14%  Similarity=0.311  Sum_probs=68.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.++||.|+ |++|.+.++.+...|++|+++.++.++.+++.+++   +.+..   .|-.+++.+.++       .+.+
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999987 99999999999999999999999988776665554   43322   244555433332       3479


Q ss_pred             cEEEEccCCcc-------------------------cHHHHHHhh--ccCCEEEEEcCCCC
Q 021300          249 DGIIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAPEK  282 (314)
Q Consensus       249 d~v~d~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~G~~~~  282 (314)
                      |++|+++|...                         ....+++.|  +.+|++|.+++..+
T Consensus        83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~  143 (264)
T 3tfo_A           83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGA  143 (264)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHH
Confidence            99999998421                         112344444  34689999987543

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.61  E-value=0.00079  Score=59.29  Aligned_cols=76  Identities=21%  Similarity=0.282  Sum_probs=56.5

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHH-------cCC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~~-------~~~  247 (314)
                      -.|.++||.|+ |++|.+.++.+...|++|++++++.++.+++.+++   +.+.   ..|-.+.+.+.++       .++
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            46789999997 99999999999999999999999988776665544   3332   2344555433332       247


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus       109 id~lvnnAg~  118 (301)
T 3tjr_A          109 VDVVFSNAGI  118 (301)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999983

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.60  E-value=0.00034  Score=61.65  Aligned_cols=96  Identities=14%  Similarity=0.091  Sum_probs=70.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCc--EEecCCCHHHHHHHcCCccEEEEccCCc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~--~~v~~~~~~~~~~~~~~~d~v~d~~g~~  258 (314)
                      -.+.+++|+|+|++|.+++..+...|+ +++++.++.++.++++++++..  .+++   .+.+.+....+|+||++++..
T Consensus       139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~---~~~~~~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS---LAEAETRLAEYDIIINTTSVG  215 (297)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC---HHHHHHTGGGCSEEEECSCTT
T ss_pred             CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee---HHHHHhhhccCCEEEECCCCC
Confidence            467899999999999999999999998 8999999998888898888762  2221   233444556899999999854


Q ss_pred             cc-----HHHHHHhhccCCEEEEEcCC
Q 021300          259 HP-----LMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       259 ~~-----~~~~~~~l~~~G~~v~~G~~  280 (314)
                      ..     .......++++..++++...
T Consensus       216 ~~~~~~~~~i~~~~l~~~~~v~D~~y~  242 (297)
T 2egg_A          216 MHPRVEVQPLSLERLRPGVIVSDIIYN  242 (297)
T ss_dssp             CSSCCSCCSSCCTTCCTTCEEEECCCS
T ss_pred             CCCCCCCCCCCHHHcCCCCEEEEcCCC
Confidence            31     01112456777888888764

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.60  E-value=0.0005  Score=58.75  Aligned_cols=75  Identities=23%  Similarity=0.337  Sum_probs=57.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE---EecCCCHHHHHHH-------cCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~---~v~~~~~~~~~~~-------~~~~d~v  251 (314)
                      .|.++||.|+ +++|.+.++.+...|++|+++.+++++.+++.++++...   ..|-.+++.+.++       .+++|++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   87 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDIL   87 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5788999987 999999999999999999999999988877777665432   2355555433332       2479999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      ++++|.
T Consensus        88 v~nAg~   93 (248)
T 3op4_A           88 VNNAGI   93 (248)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999984

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.60  E-value=0.00099  Score=56.83  Aligned_cols=75  Identities=16%  Similarity=0.283  Sum_probs=54.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh-hhHHHHHHHcCCcEE---ecCCCHHHHHHH-------cCCccE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDG  250 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~-~~~~~~~~~~ga~~~---v~~~~~~~~~~~-------~~~~d~  250 (314)
                      .+.++||.|+ |++|...++.+...|++|+++.+++ ++.++..++.+.+..   .|-.+++.+.++       .+++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   85 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999997 9999999999999999999999987 655544455564322   244555444332       357999


Q ss_pred             EEEccCC
Q 021300          251 IIDTVSA  257 (314)
Q Consensus       251 v~d~~g~  257 (314)
                      +|+++|.
T Consensus        86 lv~nAg~   92 (249)
T 2ew8_A           86 LVNNAGI   92 (249)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999884

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.60  E-value=0.00066  Score=58.13  Aligned_cols=98  Identities=14%  Similarity=0.097  Sum_probs=69.1

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE--EecCCCHHHHHH-------HcCCccEEEEc
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS--FLVSRDQDEMQA-------AMGTMDGIIDT  254 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~--~v~~~~~~~~~~-------~~~~~d~v~d~  254 (314)
                      .++||.|+ +++|.+.++.+...|++|+++.+++++..++.++.+...  ..|-.+++.+.+       ..+++|+++++
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNN   82 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNN   82 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            57899987 999999999999999999999999988877766644221  124444443332       23579999999


Q ss_pred             cCCc-------------------------ccHHHHHHhh-ccCCEEEEEcCCCC
Q 021300          255 VSAV-------------------------HPLMPLIGLL-KSQGKLVLVGAPEK  282 (314)
Q Consensus       255 ~g~~-------------------------~~~~~~~~~l-~~~G~~v~~G~~~~  282 (314)
                      +|..                         ...+.+++.| +.+|+++.+++..+
T Consensus        83 AG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~  136 (247)
T 3ged_A           83 ACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRA  136 (247)
T ss_dssp             CCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccc
Confidence            9732                         1123344455 45799999987543

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.58  E-value=0.0013  Score=50.95  Aligned_cols=96  Identities=19%  Similarity=0.147  Sum_probs=69.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHH-cCCccEEEEccCCccc
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVHP  260 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v-~~~~~~~~~~~-~~~~d~v~d~~g~~~~  260 (314)
                      -.++++|+|.|.+|...++.++..|.+++++++++++.+++. +.|...+. |..+++.+.+. ...+|+++-++++...
T Consensus         6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~-~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~   84 (140)
T 3fwz_A            6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELR-ERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYE   84 (140)
T ss_dssp             CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-HTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHH
T ss_pred             CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-HcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHH
Confidence            347899999999999999999999999999999998887764 57876544 44555655544 3479999999987642


Q ss_pred             HH---HHHHhhccCCEEEEEcC
Q 021300          261 LM---PLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       261 ~~---~~~~~l~~~G~~v~~G~  279 (314)
                      ..   ...+.+.+..+++....
T Consensus        85 n~~~~~~a~~~~~~~~iiar~~  106 (140)
T 3fwz_A           85 AGEIVASARAKNPDIEIIARAH  106 (140)
T ss_dssp             HHHHHHHHHHHCSSSEEEEEES
T ss_pred             HHHHHHHHHHHCCCCeEEEEEC
Confidence            22   23344455666665443

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.58  E-value=0.001  Score=57.21  Aligned_cols=75  Identities=16%  Similarity=0.205  Sum_probs=56.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--cE-EecCCCHHHHHHH-------cCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DS-FLVSRDQDEMQAA-------MGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~~-~v~~~~~~~~~~~-------~~~~d~v  251 (314)
                      .+.++||.|+ |++|...++.+...|++|+++++++++.+++.+++..  .. ..|-.+++.+.++       .+++|++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l   90 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL   90 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4688999997 9999999999999999999999998877777666542  22 2344555443333       2479999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      |+++|.
T Consensus        91 v~~Ag~   96 (263)
T 3ak4_A           91 CANAGV   96 (263)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999883

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.57  E-value=0.00075  Score=58.57  Aligned_cols=99  Identities=15%  Similarity=0.192  Sum_probs=67.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CC--cE---EecCCCHHHHHHH-------cC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA--DS---FLVSRDQDEMQAA-------MG  246 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga--~~---~v~~~~~~~~~~~-------~~  246 (314)
                      .+.++||.|+ |.+|...++.+...|++|++++++.++.+++.+++   +.  ..   ..|-.+++.+.++       .+
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  110 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS  110 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4678999997 99999999999999999999999987665554432   31  11   1244555443332       24


Q ss_pred             CccEEEEccCCccc-------------------------HHHHHHhhcc----CCEEEEEcCCC
Q 021300          247 TMDGIIDTVSAVHP-------------------------LMPLIGLLKS----QGKLVLVGAPE  281 (314)
Q Consensus       247 ~~d~v~d~~g~~~~-------------------------~~~~~~~l~~----~G~~v~~G~~~  281 (314)
                      ++|++|+++|....                         ...+++.++.    +|+++.+++..
T Consensus       111 ~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~  174 (279)
T 1xg5_A          111 GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMS  174 (279)
T ss_dssp             CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGG
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChh
Confidence            79999999883210                         3345555543    28999998754

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.57  E-value=0.00013  Score=62.27  Aligned_cols=99  Identities=15%  Similarity=0.154  Sum_probs=69.9

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc---EEecCCCHHHHHHH---cCCccEEEE
Q 021300          181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD---SFLVSRDQDEMQAA---MGTMDGIID  253 (314)
Q Consensus       181 ~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~---~~v~~~~~~~~~~~---~~~~d~v~d  253 (314)
                      +-.|+++||.|+ +++|.+.++.+...|++|+++.++.++.++.   .+..   ...|-.+++.+.++   .+++|++++
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVN   84 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP---RHPRIRREELDITDSQRLQRLFEALPRLDVLVN   84 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC---CCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh---hcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            457999999987 9999999999999999999999987655322   2222   22344555554443   357999999


Q ss_pred             ccCCc-----------------------ccHHHHHHhhc-cCCEEEEEcCCCC
Q 021300          254 TVSAV-----------------------HPLMPLIGLLK-SQGKLVLVGAPEK  282 (314)
Q Consensus       254 ~~g~~-----------------------~~~~~~~~~l~-~~G~~v~~G~~~~  282 (314)
                      +.|..                       ...+.+++.|+ .+|++|.+++..+
T Consensus        85 NAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~  137 (242)
T 4b79_A           85 NAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYS  137 (242)
T ss_dssp             CCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGG
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccc
Confidence            99832                       12334555664 5799999987543

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.57  E-value=0.0012  Score=56.27  Aligned_cols=75  Identities=23%  Similarity=0.353  Sum_probs=55.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .|.++||.|+ |++|.+.++.+...|++|+++.+++++.+++.+++   +.+..   .|-.+++.+.++       .+++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   85 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL   85 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999997 99999999999999999999999987766665543   43322   244555433322       2479


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|+++|.
T Consensus        86 d~lv~nAg~   94 (247)
T 2jah_A           86 DILVNNAGI   94 (247)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.57  E-value=0.0019  Score=54.50  Aligned_cols=74  Identities=23%  Similarity=0.343  Sum_probs=56.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-CcE-EecCCCHHHHHHHcC---CccEEEEccC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADS-FLVSRDQDEMQAAMG---TMDGIIDTVS  256 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-a~~-~v~~~~~~~~~~~~~---~~d~v~d~~g  256 (314)
                      .+.++||.|+ |.+|...++.+...|++|+++++++++.+++.++.. .+. ..|-.+++.+.+...   .+|++|+++|
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag   85 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCc
Confidence            5678999998 999999999999999999999999887766666543 332 235556666555543   5899999988

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.57  E-value=0.001  Score=57.88  Aligned_cols=75  Identities=24%  Similarity=0.308  Sum_probs=57.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe---cCCCHHHHHH-------HcCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL---VSRDQDEMQA-------AMGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v---~~~~~~~~~~-------~~~~~d~v  251 (314)
                      .|.++||.|+ +++|.+.++.+...|++|+++.++.++.+++.++++....+   |-.+++.+.+       ..+.+|++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4678999987 99999999999999999999999998888888777754332   4444433222       23579999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      ++++|.
T Consensus        84 vnnAg~   89 (281)
T 3zv4_A           84 IPNAGI   89 (281)
T ss_dssp             ECCCCC
T ss_pred             EECCCc
Confidence            999984

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.56  E-value=0.0014  Score=56.22  Aligned_cols=75  Identities=17%  Similarity=0.228  Sum_probs=54.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------c-CC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------M-GT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~-~~  247 (314)
                      .|.++||.|+ |++|...++.+...|++|+++.+++++.+++.+++   +.+..   .|-.+++.+.++       . +.
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   87 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   87 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999997 99999999999999999999999987766554443   43321   244555443332       2 67


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus        88 id~lv~~Ag~   97 (260)
T 2ae2_A           88 LNILVNNAGI   97 (260)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.56  E-value=0.0013  Score=56.57  Aligned_cols=75  Identities=16%  Similarity=0.292  Sum_probs=55.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCcEE---ecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADSF---LVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----ga~~~---v~~~~~~~~~~~-------~~~  247 (314)
                      .|.++||.|+ |++|...++.+...|++|+++.+++++.+++.+++    +.+..   .|-.+++.+.++       .++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG   85 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999997 99999999999999999999999987766654443    53322   244555443332       247


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus        86 id~lv~~Ag~   95 (263)
T 3ai3_A           86 ADILVNNAGT   95 (263)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.56  E-value=0.0013  Score=56.89  Aligned_cols=75  Identities=19%  Similarity=0.248  Sum_probs=54.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------c-CC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------M-GT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~-~~  247 (314)
                      .|.++||.|+ |++|.+.++.+...|++|+++.+++++.+++.+++   +.+..   .|-.+++.+.++       . +.
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   99 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   99 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999997 99999999999999999999999987765554433   43322   244555433332       2 67


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus       100 id~lv~nAg~  109 (273)
T 1ae1_A          100 LNILVNNAGV  109 (273)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999984

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.56  E-value=0.00045  Score=53.46  Aligned_cols=75  Identities=20%  Similarity=0.144  Sum_probs=59.0

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHH-cCCccEEEEccCCcc
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVH  259 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v-~~~~~~~~~~~-~~~~d~v~d~~g~~~  259 (314)
                      ..+++|+|+|.+|...++.+...|.+|+++++++++.+++. +.+...+. |..+++.+.+. ..++|+++.++++..
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~-~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~   82 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLE-DEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDE   82 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-HTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH-HCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHH
Confidence            46799999999999999999999999999999998876664 45665433 55566666554 347999999999654

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.56  E-value=0.0012  Score=56.49  Aligned_cols=74  Identities=19%  Similarity=0.285  Sum_probs=53.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCcc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTMD  249 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~d  249 (314)
                      +.++||.|+ |++|...++.+...|++|+++.+++++.+++.+++   +....   .|-.+++.+.++       .+++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            467899997 99999999999999999999999987766554443   43221   244555443332       24799


Q ss_pred             EEEEccCC
Q 021300          250 GIIDTVSA  257 (314)
Q Consensus       250 ~v~d~~g~  257 (314)
                      ++|+++|.
T Consensus        82 ~lv~nAg~   89 (256)
T 1geg_A           82 VIVNNAGV   89 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.56  E-value=0.00024  Score=61.80  Aligned_cols=106  Identities=16%  Similarity=0.152  Sum_probs=70.4

Q ss_pred             hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEE
Q 021300          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d  253 (314)
                      +|...+.--++.+++|+|+|++|.++++.+...|++|+++.++.++.+++.++++...-++..+.+.+.+  +.+|++++
T Consensus       109 ~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~--~~~DivVn  186 (271)
T 1nyt_A          109 DLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEG--HEFDLIIN  186 (271)
T ss_dssp             HHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTT--CCCSEEEE
T ss_pred             HHHhcCcCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhcc--CCCCEEEE
Confidence            3443332246889999999999999999999999999999999988888888776410011111111111  68999999


Q ss_pred             ccCCcccH---HHHHHhhccCCEEEEEcCCC
Q 021300          254 TVSAVHPL---MPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       254 ~~g~~~~~---~~~~~~l~~~G~~v~~G~~~  281 (314)
                      +++....-   ......++++..++.+...+
T Consensus       187 ~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~p  217 (271)
T 1nyt_A          187 ATSSGISGDIPAIPSSLIHPGIYCYDMFYQK  217 (271)
T ss_dssp             CCSCGGGTCCCCCCGGGCCTTCEEEESCCCS
T ss_pred             CCCCCCCCCCCCCCHHHcCCCCEEEEeccCC
Confidence            99865310   00123456677778876643

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.55  E-value=0.00068  Score=58.06  Aligned_cols=75  Identities=24%  Similarity=0.271  Sum_probs=55.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHHc------CCcc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAAM------GTMD  249 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~~------~~~d  249 (314)
                      .+.++||.|+ +++|.+.++.+...|++|+++.++.++.+++.+++   +.+..   .|-.+++.+.++.      +++|
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id   85 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLE   85 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCce
Confidence            5688999987 99999999999999999999999988776665554   43322   2444444333221      5799


Q ss_pred             EEEEccCC
Q 021300          250 GIIDTVSA  257 (314)
Q Consensus       250 ~v~d~~g~  257 (314)
                      ++|+++|.
T Consensus        86 ~lv~nAg~   93 (252)
T 3h7a_A           86 VTIFNVGA   93 (252)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999984

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.54  E-value=0.0011  Score=57.54  Aligned_cols=75  Identities=16%  Similarity=0.284  Sum_probs=54.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---C---CcE---EecCCCHHHHHHH-------c
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---G---ADS---FLVSRDQDEMQAA-------M  245 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---g---a~~---~v~~~~~~~~~~~-------~  245 (314)
                      .+.++||.|+ |++|...++.+...|++|+++.+++++.+++.+++   .   ...   ..|-.+++.+.++       .
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            4678999887 99999999999999999999999988777666555   2   121   1344555443332       2


Q ss_pred             CCccEEEEccCC
Q 021300          246 GTMDGIIDTVSA  257 (314)
Q Consensus       246 ~~~d~v~d~~g~  257 (314)
                      +++|++|+++|.
T Consensus        85 g~id~lv~~Ag~   96 (278)
T 1spx_A           85 GKLDILVNNAGA   96 (278)
T ss_dssp             SCCCEEEECCC-
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.54  E-value=0.00018  Score=55.60  Aligned_cols=75  Identities=19%  Similarity=0.321  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHH-cCCccEEEEccCCc
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAV  258 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v-~~~~~~~~~~~-~~~~d~v~d~~g~~  258 (314)
                      ++++++|+|+|.+|...++.++..|.+++++++++++.+.+ ++.+...+. +..+++.+.+. .+++|+++.+++..
T Consensus         5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~   81 (144)
T 2hmt_A            5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAY-ASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN   81 (144)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTT-TTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence            35679999999999999999999999999999987766544 334554332 34445555544 45799999999874

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.53  E-value=0.00018  Score=64.47  Aligned_cols=99  Identities=18%  Similarity=0.157  Sum_probs=64.0

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHHcC---------------Cc-EEecCCCHHHH
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERLG---------------AD-SFLVSRDQDEM  241 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~~~g---------------a~-~~v~~~~~~~~  241 (314)
                      .+++|++||-+|+|. |..++.+++..|  .+++.++.++...+.+.+.+.               .. .++..+-.+..
T Consensus       102 ~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~  180 (336)
T 2b25_A          102 DINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGAT  180 (336)
T ss_dssp             TCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC
T ss_pred             CCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcc
Confidence            378999999999877 788888888765  689999999876655543221               11 12211111111


Q ss_pred             HHH-cCCccEEEEccCCc-ccHHHHHHhhccCCEEEEEcC
Q 021300          242 QAA-MGTMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       242 ~~~-~~~~d~v~d~~g~~-~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      ..+ .+.||+|+-..... ..+..+.+.|+++|+++....
T Consensus       181 ~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  220 (336)
T 2b25_A          181 EDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  220 (336)
T ss_dssp             -------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             cccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            112 23699988765544 347889999999999997754

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.53  E-value=0.0018  Score=54.38  Aligned_cols=99  Identities=17%  Similarity=0.265  Sum_probs=68.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-CcEE-ecCCCHHHHHHH-------cCCccEEEE
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADSF-LVSRDQDEMQAA-------MGTMDGIID  253 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-a~~~-v~~~~~~~~~~~-------~~~~d~v~d  253 (314)
                      +.++||.|+ |.+|...++.+...|++|+++.+++++.+++.++++ ...+ .|-.+++.+.+.       .+++|++|+
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVN   84 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            567999987 999999999999999999999999887777766664 2222 244555433322       247999999


Q ss_pred             ccCCcc-------------------------cHHHHHHhhcc--CCEEEEEcCCCC
Q 021300          254 TVSAVH-------------------------PLMPLIGLLKS--QGKLVLVGAPEK  282 (314)
Q Consensus       254 ~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~G~~~~  282 (314)
                      +.|...                         ....+++.++.  .|+++.+++...
T Consensus        85 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  140 (234)
T 2ehd_A           85 NAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAG  140 (234)
T ss_dssp             CCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTT
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchh
Confidence            988321                         01244555543  589999987543

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.53  E-value=0.0015  Score=56.15  Aligned_cols=76  Identities=17%  Similarity=0.267  Sum_probs=55.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~  247 (314)
                      -.+.++||.|+ |++|...++.+...|++|++++++.++.+++.+++   +.+..   .|-.+++.+.++       .+.
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            35788999987 99999999999999999999999988776665544   43322   244555433322       347


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus       107 id~lv~~Ag~  116 (262)
T 3rkr_A          107 CDVLVNNAGV  116 (262)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999985

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.51  E-value=0.0015  Score=56.20  Aligned_cols=99  Identities=14%  Similarity=0.197  Sum_probs=67.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-----CcE---EecCCCHHHHHHH-------cC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-----ADS---FLVSRDQDEMQAA-------MG  246 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-----a~~---~v~~~~~~~~~~~-------~~  246 (314)
                      .+.++||.|+ |++|...++.+...|++|++++++.++..++.+++.     ...   ..|-.+++.+.++       .+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   85 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            4678999997 999999999999999999999999877655544432     111   1244555433332       24


Q ss_pred             CccEEEEccCCcc-----------------cHHHHHHhhcc-----CCEEEEEcCCC
Q 021300          247 TMDGIIDTVSAVH-----------------PLMPLIGLLKS-----QGKLVLVGAPE  281 (314)
Q Consensus       247 ~~d~v~d~~g~~~-----------------~~~~~~~~l~~-----~G~~v~~G~~~  281 (314)
                      .+|++|+++|...                 ....+++.+++     .|+++.+++..
T Consensus        86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  142 (267)
T 2gdz_A           86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLA  142 (267)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred             CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCcc
Confidence            7999999998421                 12334555543     58999998753

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.51  E-value=0.0017  Score=55.45  Aligned_cols=101  Identities=20%  Similarity=0.281  Sum_probs=68.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----C--CcEE-ecC--CCHHHHHHH-------
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----G--ADSF-LVS--RDQDEMQAA-------  244 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----g--a~~~-v~~--~~~~~~~~~-------  244 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|+++.+++++.+++.+++    +  ...+ .|-  .+++.+.++       
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            45789999987 99999999999999999999999988776665543    2  2222 233  444333222       


Q ss_pred             cCCccEEEEccCCcc--------------------------cHHHHHHhhc--cCCEEEEEcCCCC
Q 021300          245 MGTMDGIIDTVSAVH--------------------------PLMPLIGLLK--SQGKLVLVGAPEK  282 (314)
Q Consensus       245 ~~~~d~v~d~~g~~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~  282 (314)
                      .+.+|++|+++|...                          ..+.+++.|+  .+|+++.+++..+
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~  155 (252)
T 3f1l_A           90 YPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVG  155 (252)
T ss_dssp             CSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred             CCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhh
Confidence            247999999998420                          1233444553  4689999987543

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.50  E-value=0.0013  Score=56.33  Aligned_cols=75  Identities=17%  Similarity=0.304  Sum_probs=57.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHH-------cCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~-------~~~~d~v  251 (314)
                      .+.++||.|+ |.+|...++.+...|++|++++++.++..++.++++....   .|-.+++.+.++       .+++|++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   90 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   90 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            4678999997 9999999999999999999999998887777777764322   244555443333       2479999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      |+++|.
T Consensus        91 i~~Ag~   96 (265)
T 2o23_A           91 VNCAGI   96 (265)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999874

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.50  E-value=0.0008  Score=57.79  Aligned_cols=99  Identities=17%  Similarity=0.190  Sum_probs=67.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-----CCcE---EecCCCHHHHHHHcC------C
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GADS---FLVSRDQDEMQAAMG------T  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~-----ga~~---~v~~~~~~~~~~~~~------~  247 (314)
                      .+.++||.|+ |++|...++.+...|++|+++.+++++.+++.+++     +.+.   ..|-.+++.+.++..      +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4678999997 99999999999999999999999987766655544     2121   135555544433321      4


Q ss_pred             ccEEEEccCCcc-------------------------cHHHHHHhhc--cCCEEEEEcCCC
Q 021300          248 MDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLVGAPE  281 (314)
Q Consensus       248 ~d~v~d~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~G~~~  281 (314)
                      +|++|+++|...                         ..+.+++.|+  ..|+++.+++..
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~  146 (260)
T 2z1n_A           86 ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVT  146 (260)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchh
Confidence            999999998321                         0134455553  348999998753

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.50  E-value=0.0012  Score=56.76  Aligned_cols=76  Identities=13%  Similarity=0.242  Sum_probs=56.0

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~  247 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|+++.++.++.+++.+++   +.+..   .|-.+++.+.++       .+.
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999987 99999999999999999999999988776665544   43322   244555433322       347


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus        89 id~lv~nAg~   98 (264)
T 3ucx_A           89 VDVVINNAFR   98 (264)
T ss_dssp             CSEEEECCCS
T ss_pred             CcEEEECCCC
Confidence            9999999864

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.49  E-value=0.001  Score=57.22  Aligned_cols=100  Identities=14%  Similarity=0.214  Sum_probs=65.4

Q ss_pred             CCCEEEEEcC-Ch--HHHHHHHHHHHCCCeEEEEeCChhhH---HHHHHHcCC-cE---EecCCCHHHHHH-------Hc
Q 021300          183 PGMHVGVVGL-GG--LGHVAVKFAKAMGVKVTVISTSPSKK---SEAIERLGA-DS---FLVSRDQDEMQA-------AM  245 (314)
Q Consensus       183 ~g~~vlI~Ga-g~--vG~~a~~~a~~~g~~vi~v~~~~~~~---~~~~~~~ga-~~---~v~~~~~~~~~~-------~~  245 (314)
                      .|.++||.|+ |.  +|.+.++.+...|++|+++.++++..   .++.++++. +.   ..|-.+++.+.+       ..
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV   85 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            5788999986 66  99999999999999999998876433   334444443 11   123344433222       23


Q ss_pred             CCccEEEEccCCcc-----------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300          246 GTMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       246 ~~~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      +.+|+++.++|...                             ..+.++..++++|+++.+++..+
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  151 (266)
T 3oig_A           86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGG  151 (266)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred             CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccc
Confidence            47999999987421                             12334455667899999987543

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.49  E-value=0.0019  Score=55.89  Aligned_cols=75  Identities=20%  Similarity=0.306  Sum_probs=56.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE--ecCCCHHHHHHH-------cCCccEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF--LVSRDQDEMQAA-------MGTMDGII  252 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~--v~~~~~~~~~~~-------~~~~d~v~  252 (314)
                      .|.++||.|+ |++|...++.+...|++|+++.+++++.+++.+++.....  .|-.+++.+.++       .+++|++|
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   87 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   87 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            5788999997 9999999999999999999999998877777666643221  244555433332       24799999


Q ss_pred             EccCC
Q 021300          253 DTVSA  257 (314)
Q Consensus       253 d~~g~  257 (314)
                      +++|.
T Consensus        88 ~nAg~   92 (270)
T 1yde_A           88 NNAGH   92 (270)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99874

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.49  E-value=0.00038  Score=60.37  Aligned_cols=100  Identities=22%  Similarity=0.234  Sum_probs=68.8

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCChhhHHHHHHHc----C--C-cEEecCCCHHHHHHHcCCccE
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERL----G--A-DSFLVSRDQDEMQAAMGTMDG  250 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~--g~~vi~v~~~~~~~~~~~~~~----g--a-~~~v~~~~~~~~~~~~~~~d~  250 (314)
                      .++++++||-+|+| .|..+..+++..  +.+++.++.+++..+.+.+.+    |  . ..-+...+........+.||+
T Consensus        96 ~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~  174 (280)
T 1i9g_A           96 DIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDR  174 (280)
T ss_dssp             TCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEE
T ss_pred             CCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeE
Confidence            47899999999988 588888888864  569999999887765554432    4  2 222222222111011246999


Q ss_pred             EEEccCCc-ccHHHHHHhhccCCEEEEEcCC
Q 021300          251 IIDTVSAV-HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       251 v~d~~g~~-~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      |+...... ..+..+.+.|+++|+++.+...
T Consensus       175 v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  205 (280)
T 1i9g_A          175 AVLDMLAPWEVLDAVSRLLVAGGVLMVYVAT  205 (280)
T ss_dssp             EEEESSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred             EEECCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence            99877654 5688899999999999987653

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.49  E-value=0.0021  Score=56.03  Aligned_cols=101  Identities=20%  Similarity=0.300  Sum_probs=69.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC---CcEE---ecCCCHHHHHHH-------cCC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---ADSF---LVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g---a~~~---v~~~~~~~~~~~-------~~~  247 (314)
                      .++.++||.|+ +++|.+.++.+...|++|+++.++.++.+++.+++.   .+..   .|-.+++.+.++       .++
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (283)
T 3v8b_A           26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH  105 (283)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            35688999987 999999999999999999999999888777766653   2222   244555433322       347


Q ss_pred             ccEEEEccCCcc--------------------------cHHHHHHhhc--cCCEEEEEcCCCC
Q 021300          248 MDGIIDTVSAVH--------------------------PLMPLIGLLK--SQGKLVLVGAPEK  282 (314)
Q Consensus       248 ~d~v~d~~g~~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~  282 (314)
                      +|++++++|...                          ..+.+++.|+  .+|+++.+++..+
T Consensus       106 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~  168 (283)
T 3v8b_A          106 LDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSING  168 (283)
T ss_dssp             CCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT
T ss_pred             CCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhh
Confidence            999999998421                          1223444443  3689999987543

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.48  E-value=0.0016  Score=57.04  Aligned_cols=100  Identities=18%  Similarity=0.180  Sum_probs=66.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh--hH---HHHHHHcCCcEEe---cCCCHHHHHH-------HcC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS--KK---SEAIERLGADSFL---VSRDQDEMQA-------AMG  246 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~--~~---~~~~~~~ga~~~v---~~~~~~~~~~-------~~~  246 (314)
                      .|.++||.|+ +++|.+.++.+...|++|+++.++.+  ..   .+..++.+.+..+   |-.+++.+.+       ..+
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5789999997 99999999999999999998887632  22   2233445654433   3344433322       235


Q ss_pred             CccEEEEccCCcc--------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300          247 TMDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       247 ~~d~v~d~~g~~~--------------------------~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      ++|+++++.|...                          ..+.++..++++|+++.+++...
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~  189 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQA  189 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGG
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhh
Confidence            7999999988421                          12334456667899999987543

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.47  E-value=0.0013  Score=57.27  Aligned_cols=75  Identities=23%  Similarity=0.318  Sum_probs=55.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEEe---cCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSFL---VSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~v---~~~~~~~~~~~-------~~~~  248 (314)
                      .|.++||.|+ +++|.+.++.+...|++|+++.++.++.+++.+++   +....+   |-.+++.+.++       .+++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL   86 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5788999987 99999999999999999999999988877776665   333322   33444433322       3479


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|+++|.
T Consensus        87 D~lvnnAg~   95 (280)
T 3tox_A           87 DTAFNNAGA   95 (280)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999983

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.47  E-value=0.0013  Score=56.54  Aligned_cols=75  Identities=16%  Similarity=0.230  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhh-HHHHHHHc----CCcEE---ecCCCHHHHHHH-------cC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERL----GADSF---LVSRDQDEMQAA-------MG  246 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~-~~~~~~~~----ga~~~---v~~~~~~~~~~~-------~~  246 (314)
                      .|.++||.|+ |++|...++.+...|++|+++.+++++ .+++.+++    +.+..   .|-.+++.+.++       .+
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4678999887 999999999999999999999988766 55554443    43322   244444433332       24


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      ++|++|+++|.
T Consensus        83 ~iD~lv~~Ag~   93 (260)
T 1x1t_A           83 RIDILVNNAGI   93 (260)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.46  E-value=0.0014  Score=56.22  Aligned_cols=74  Identities=20%  Similarity=0.299  Sum_probs=55.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC---CcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---ADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g---a~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .|.++||.|+ +++|.+.++.+...|++|+++.++.++.+++.+++.   ....   .|-.+++.+.++       .+++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   84 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI   84 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999987 999999999999999999999999888777766653   2222   244555433322       3479


Q ss_pred             cEEEEccC
Q 021300          249 DGIIDTVS  256 (314)
Q Consensus       249 d~v~d~~g  256 (314)
                      |++|+++|
T Consensus        85 d~lv~nAg   92 (257)
T 3imf_A           85 DILINNAA   92 (257)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999998

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.46  E-value=0.00092  Score=57.58  Aligned_cols=75  Identities=11%  Similarity=0.107  Sum_probs=55.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHH-------cCCccEEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAA-------MGTMDGIID  253 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~-------~~~~d~v~d  253 (314)
                      .|.++||.|+ |++|.+.++.+...|++|+++.++.++..+..++.+...+ .|-.+++.+.++       .+.+|++|+
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~  105 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVH  105 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            4678999987 9999999999999999999999998776566566675433 244555433322       347999999


Q ss_pred             ccCC
Q 021300          254 TVSA  257 (314)
Q Consensus       254 ~~g~  257 (314)
                      ++|.
T Consensus       106 nAg~  109 (260)
T 3gem_A          106 NASE  109 (260)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9983

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.45  E-value=0.0026  Score=54.99  Aligned_cols=75  Identities=13%  Similarity=0.273  Sum_probs=54.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.++||.|+ |++|...+..+...|++|+++++++++.+++.+++   +....   .|-.+++.+.++       .+++
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  109 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV  109 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            5688999997 99999999999999999999999987766554443   43321   244455433322       2479


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|.++|.
T Consensus       110 D~li~~Ag~  118 (272)
T 1yb1_A          110 SILVNNAGV  118 (272)
T ss_dssp             SEEEECCCC
T ss_pred             cEEEECCCc
Confidence            999999984

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.45  E-value=0.0012  Score=56.93  Aligned_cols=76  Identities=18%  Similarity=0.288  Sum_probs=54.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH----cCCcEE---ecCCCHHHHH-------HHcC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGADSF---LVSRDQDEMQ-------AAMG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~----~ga~~~---v~~~~~~~~~-------~~~~  246 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|+++.++.++.+++.++    .+.+..   .|-.+++.+.       +..+
T Consensus        18 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   97 (266)
T 4egf_A           18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG   97 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35788999987 9999999999999999999999998776665444    343322   2334433222       2235


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      ++|++|+++|.
T Consensus        98 ~id~lv~nAg~  108 (266)
T 4egf_A           98 GLDVLVNNAGI  108 (266)
T ss_dssp             SCSEEEEECCC
T ss_pred             CCCEEEECCCc
Confidence            79999999883

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.45  E-value=0.00079  Score=55.75  Aligned_cols=97  Identities=14%  Similarity=0.172  Sum_probs=68.4

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCc---EEecCCCHHHHHHHcCCccEEEEc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGAD---SFLVSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~ga~---~~v~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      ++++++||-+|+|. |..++.+++. +.+++.++.+++..+.+.+   .+|..   .++..+..+.+ ...+.||+|+..
T Consensus        53 ~~~~~~vLDlGcG~-G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~~~D~v~~~  129 (204)
T 3njr_A           53 PRRGELLWDIGGGS-GSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL-ADLPLPEAVFIG  129 (204)
T ss_dssp             CCTTCEEEEETCTT-CHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG-TTSCCCSEEEEC
T ss_pred             CCCCCEEEEecCCC-CHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc-ccCCCCCEEEEC
Confidence            68999999999976 8888888888 8899999999887655433   34543   22222222211 112479999976


Q ss_pred             cCCcc-cHHHHHHhhccCCEEEEEcCC
Q 021300          255 VSAVH-PLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       255 ~g~~~-~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      .+... .+..+.+.|+++|+++.....
T Consensus       130 ~~~~~~~l~~~~~~LkpgG~lv~~~~~  156 (204)
T 3njr_A          130 GGGSQALYDRLWEWLAPGTRIVANAVT  156 (204)
T ss_dssp             SCCCHHHHHHHHHHSCTTCEEEEEECS
T ss_pred             CcccHHHHHHHHHhcCCCcEEEEEecC
Confidence            54322 578888999999999988764

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.45  E-value=0.0013  Score=56.96  Aligned_cols=76  Identities=20%  Similarity=0.285  Sum_probs=55.5

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEEe---cCCCHHHHHHH-------cCC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSFL---VSRDQDEMQAA-------MGT  247 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~v---~~~~~~~~~~~-------~~~  247 (314)
                      -.|.++||.|+ |++|.+.++.+...|++|+++.+++++.+++.+++   +.+..+   |-.+++.+.++       .++
T Consensus        24 l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (271)
T 4ibo_A           24 LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID  103 (271)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            35788999987 99999999999999999999999988776665544   443332   33444433322       247


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++++++|.
T Consensus       104 iD~lv~nAg~  113 (271)
T 4ibo_A          104 VDILVNNAGI  113 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.45  E-value=0.0016  Score=56.57  Aligned_cols=75  Identities=19%  Similarity=0.262  Sum_probs=54.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.++||.|+ |++|...++.+...|++|+++.+++++.+++.+++   +.+..   .|-.+++.+.++       .+++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV  100 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999997 99999999999999999999999987765554443   43322   244555433322       2479


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|+++|.
T Consensus       101 D~lv~~Ag~  109 (277)
T 2rhc_B          101 DVLVNNAGR  109 (277)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.45  E-value=0.0017  Score=55.73  Aligned_cols=75  Identities=13%  Similarity=0.226  Sum_probs=54.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.++||.|+ |++|.+.++.+...|++|+++.+++++.+++.+++   +.+..   .|-.+++.+.++       .+++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   85 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999997 99999999999999999999999987766655444   43322   244555433322       3479


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|+++|.
T Consensus        86 d~lv~nAg~   94 (262)
T 1zem_A           86 DFLFNNAGY   94 (262)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.45  E-value=0.0018  Score=56.79  Aligned_cols=100  Identities=15%  Similarity=0.150  Sum_probs=67.5

Q ss_pred             CCCCEEEEEcC-Ch--HHHHHHHHHHHCCCeEEEEeCChhh---HHHHHHHcCCcEE--ecCCCHHHHHHH-------cC
Q 021300          182 KPGMHVGVVGL-GG--LGHVAVKFAKAMGVKVTVISTSPSK---KSEAIERLGADSF--LVSRDQDEMQAA-------MG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~--vG~~a~~~a~~~g~~vi~v~~~~~~---~~~~~~~~ga~~~--v~~~~~~~~~~~-------~~  246 (314)
                      -.|.++||.|+ |.  +|.+.++.+...|++|+++.++++.   ..++.++.+...+  .|-.+++.+.++       .+
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG  108 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            45789999987 66  9999999999999999999888542   3334444453222  244555433332       24


Q ss_pred             CccEEEEccCCcc-----------------------------cHHHHHHhhccCCEEEEEcCCC
Q 021300          247 TMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       247 ~~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      .+|++|+++|...                             ..+.+++.|+++|+++.+++..
T Consensus       109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~  172 (293)
T 3grk_A          109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYG  172 (293)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGG
T ss_pred             CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehh
Confidence            7999999998431                             1234555667789999998754

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=97.44  E-value=0.001  Score=58.15  Aligned_cols=76  Identities=13%  Similarity=0.150  Sum_probs=59.9

Q ss_pred             CCCCEEEEEc-CChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCc-EEecCCCHHHHHHHcCCccEEEEcc
Q 021300          182 KPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GAD-SFLVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       182 ~~g~~vlI~G-ag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----ga~-~~v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      .+|.++||.| +|++|.+++..+...|++|+++.++.++.+++.+++    +.. ...|-.+++.+.+....+|++++++
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~a  196 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG  196 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECC
Confidence            4688999999 599999999999999999999999988777666554    322 2345666677777777899999999


Q ss_pred             CC
Q 021300          256 SA  257 (314)
Q Consensus       256 g~  257 (314)
                      |.
T Consensus       197 g~  198 (287)
T 1lu9_A          197 AI  198 (287)
T ss_dssp             CT
T ss_pred             Cc
Confidence            73

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.44  E-value=0.0013  Score=56.00  Aligned_cols=75  Identities=17%  Similarity=0.353  Sum_probs=54.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.++||.|+ |.+|...++.+...|++|+++++++++.+++.+++   +.+..   .|-.+++.+.++       .+++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   89 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999987 99999999999989999999999987665554433   43322   244555444333       2479


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|.++|.
T Consensus        90 d~vi~~Ag~   98 (255)
T 1fmc_A           90 DILVNNAGG   98 (255)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.44  E-value=0.00087  Score=57.45  Aligned_cols=75  Identities=21%  Similarity=0.334  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHH-------cCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~-------~~~~d~v  251 (314)
                      .|.++||.|+ +++|.+.++.+...|++|+++.+++++.+++.++++....   .|-.+++.+.++       .+++|++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   85 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL   85 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5688999987 9999999999999999999999998877777766664221   244454433322       3479999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      |+++|.
T Consensus        86 v~nAg~   91 (257)
T 3tpc_A           86 VNCAGT   91 (257)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.43  E-value=0.0017  Score=55.57  Aligned_cols=75  Identities=19%  Similarity=0.253  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-ChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~-~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~  247 (314)
                      .+.++||.|+ |.+|...++.+...|++|+++.+ ++++.+++.+++   +....   .|-.+++.+.+.       .++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 99999999999989999999999 766555444333   43221   244444433332       247


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus        86 id~li~~Ag~   95 (261)
T 1gee_A           86 LDVMINNAGL   95 (261)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.43  E-value=0.002  Score=55.74  Aligned_cols=99  Identities=17%  Similarity=0.307  Sum_probs=66.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh-hhHHHHHH---HcCCcEE---ecCCCHHHHHHH-------cC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAIE---RLGADSF---LVSRDQDEMQAA-------MG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~-~~~~~~~~---~~ga~~~---v~~~~~~~~~~~-------~~  246 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|+++.+.. ++.+++.+   +.+....   .|-.+++.+.++       .+
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG  108 (271)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            45789999997 9999999999999999999886654 44434333   3354332   244555433332       24


Q ss_pred             CccEEEEccCCc-------------------------ccHHHHHHhhccCCEEEEEcCC
Q 021300          247 TMDGIIDTVSAV-------------------------HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       247 ~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      ++|++|+++|..                         ...+.+++.|+++|+++.+++.
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~  167 (271)
T 3v2g_A          109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSN  167 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCG
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeCh
Confidence            799999998842                         1233455667778999999774

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.43  E-value=0.0017  Score=56.82  Aligned_cols=98  Identities=14%  Similarity=0.242  Sum_probs=66.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHH----HHHHHcCCcEEe---cCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS----EAIERLGADSFL---VSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~----~~~~~~ga~~~v---~~~~~~~~~~~-------~~~  247 (314)
                      .|.++||.|+ |++|.+.++.+...|++|+++.++.++..    +..++.+.+..+   |-.+++.+.++       .+.
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999997 99999999999999999999998865322    223344544332   44454433322       347


Q ss_pred             ccEEEEccCCcc--------------------------cHHHHHHhhccCCEEEEEcCC
Q 021300          248 MDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       248 ~d~v~d~~g~~~--------------------------~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      +|++|+++|...                          .++.+++.|+++|+++.+++.
T Consensus       126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~  184 (291)
T 3ijr_A          126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASI  184 (291)
T ss_dssp             CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCT
T ss_pred             CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEech
Confidence            999999987321                          123345566778999999875

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.43  E-value=0.0013  Score=56.34  Aligned_cols=101  Identities=12%  Similarity=0.161  Sum_probs=68.5

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~  247 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|+++.++.++.+++.+++   +.+..   .|-.+++.+.++       .++
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   89 (256)
T 3gaf_A           10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK   89 (256)
T ss_dssp             CTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35788999987 99999999988888999999999987766655443   43322   244555433322       247


Q ss_pred             ccEEEEccCCcc------------------------cHHHHHHhhc--cCCEEEEEcCCCC
Q 021300          248 MDGIIDTVSAVH------------------------PLMPLIGLLK--SQGKLVLVGAPEK  282 (314)
Q Consensus       248 ~d~v~d~~g~~~------------------------~~~~~~~~l~--~~G~~v~~G~~~~  282 (314)
                      +|++++++|...                        ..+.+++.|+  .+|+++.+++..+
T Consensus        90 id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  150 (256)
T 3gaf_A           90 ITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAG  150 (256)
T ss_dssp             CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG
T ss_pred             CCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHH
Confidence            999999988421                        1223444443  3689999987543

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.43  E-value=0.0018  Score=55.07  Aligned_cols=75  Identities=19%  Similarity=0.338  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-ChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~-~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~  247 (314)
                      .|.++||.|+ |++|...++.+...|++|+++.+ ++++.+++.+++   +.+..   .|-.+++.+.++       .++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3678999887 99999999999999999999998 666555544433   43322   244555443332       247


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus        83 id~lv~nAg~   92 (246)
T 2uvd_A           83 VDILVNNAGV   92 (246)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.42  E-value=0.0024  Score=54.60  Aligned_cols=73  Identities=23%  Similarity=0.360  Sum_probs=53.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE--ecCCCHHHHHHH-------cCCccEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF--LVSRDQDEMQAA-------MGTMDGII  252 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~--v~~~~~~~~~~~-------~~~~d~v~  252 (314)
                      .+.++||.|+ |++|...++.+...|++|+++.+++++ +++.++++. ..  .|-.+++.+.++       .+.+|++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4678999997 999999999999999999999998877 666665542 22  244554433322       24799999


Q ss_pred             EccCC
Q 021300          253 DTVSA  257 (314)
Q Consensus       253 d~~g~  257 (314)
                      +++|.
T Consensus        83 ~~Ag~   87 (256)
T 2d1y_A           83 NNAAI   87 (256)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99874

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.41  E-value=0.0022  Score=55.31  Aligned_cols=75  Identities=16%  Similarity=0.286  Sum_probs=55.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--cE---EecCCCHHHHHHH-------cCCcc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DS---FLVSRDQDEMQAA-------MGTMD  249 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~~---~v~~~~~~~~~~~-------~~~~d  249 (314)
                      .+.++||.|+ |++|...++.+...|++|+++.++.++.+++.++++.  ..   ..|-.+++.+.++       .+++|
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   94 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   94 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4678999997 9999999999999999999999988776666666542  21   1244555443333       24799


Q ss_pred             EEEEccCC
Q 021300          250 GIIDTVSA  257 (314)
Q Consensus       250 ~v~d~~g~  257 (314)
                      ++|+++|.
T Consensus        95 ~li~~Ag~  102 (278)
T 2bgk_A           95 IMFGNVGV  102 (278)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999874

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=97.41  E-value=0.0018  Score=56.21  Aligned_cols=75  Identities=20%  Similarity=0.266  Sum_probs=55.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCcEE---ecCCCHHHHHHH-------cC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADSF---LVSRDQDEMQAA-------MG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----ga~~~---v~~~~~~~~~~~-------~~  246 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|+++.++.++.+++.+++    +.+..   .|-.+++.+.++       .+
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            45789999997 99999999999999999999999987765554443    44322   244555433322       24


Q ss_pred             CccEEEEccC
Q 021300          247 TMDGIIDTVS  256 (314)
Q Consensus       247 ~~d~v~d~~g  256 (314)
                      .+|++|+++|
T Consensus       105 ~id~lv~nAg  114 (277)
T 4fc7_A          105 RIDILINCAA  114 (277)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999998

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.40  E-value=0.0015  Score=57.30  Aligned_cols=76  Identities=22%  Similarity=0.311  Sum_probs=53.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---C-CcE---EecCCCH-HHHH-------HHc
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---G-ADS---FLVSRDQ-DEMQ-------AAM  245 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---g-a~~---~v~~~~~-~~~~-------~~~  245 (314)
                      ..+.++||.|+ |++|.+.++.+...|++|++++++.++.+++.+++   + ...   ..|-.++ +.+.       +..
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            35688999987 99999999999999999999999988766665554   2 121   1244443 3222       223


Q ss_pred             CCccEEEEccCC
Q 021300          246 GTMDGIIDTVSA  257 (314)
Q Consensus       246 ~~~d~v~d~~g~  257 (314)
                      +.+|++|+++|.
T Consensus        90 g~iD~lv~nAg~  101 (311)
T 3o26_A           90 GKLDILVNNAGV  101 (311)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            589999999985

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.40  E-value=0.001  Score=57.19  Aligned_cols=75  Identities=19%  Similarity=0.212  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHH-CCCeEEEEeCChhhHHHHHHHc---CCc--E-EecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAIERL---GAD--S-FLVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~-~g~~vi~v~~~~~~~~~~~~~~---ga~--~-~v~~~~~~~~~~~-------~~~  247 (314)
                      .+.++||.|+ |.+|...++.+.. .|++|+++.++.++.+++.+++   +.+  . ..|-.+.+.+.++       .++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4678999987 9999999988888 8999999999987665554443   322  1 2344555443332       247


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|.++|.
T Consensus        83 id~li~~Ag~   92 (276)
T 1wma_A           83 LDVLVNNAGI   92 (276)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999874

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.40  E-value=0.0017  Score=56.01  Aligned_cols=100  Identities=15%  Similarity=0.228  Sum_probs=68.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-----CCcE---EecCCCHHHHHHH---cCCccE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GADS---FLVSRDQDEMQAA---MGTMDG  250 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~-----ga~~---~v~~~~~~~~~~~---~~~~d~  250 (314)
                      .|.++||.|+ +++|.+.++.+...|++|+++.+++++.+++.+++     +...   ..|-.+++.+.++   .+.+|+
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~   88 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI   88 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence            5788999887 99999999999999999999999987766655443     2221   1244555544443   347999


Q ss_pred             EEEccCCcc-------------------------cHHHHHHhh--ccCCEEEEEcCCCC
Q 021300          251 IIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAPEK  282 (314)
Q Consensus       251 v~d~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~G~~~~  282 (314)
                      +++++|...                         ..+.+++.|  +..|+++.+++..+
T Consensus        89 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  147 (267)
T 3t4x_A           89 LINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAA  147 (267)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGG
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhh
Confidence            999998421                         123344555  34589999987543

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.39  E-value=0.0012  Score=54.75  Aligned_cols=91  Identities=22%  Similarity=0.323  Sum_probs=65.2

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHHcCCccEEEEccCCc-----
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAAMGTMDGIIDTVSAV-----  258 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v-~~~~~~~~~~~~~~~d~v~d~~g~~-----  258 (314)
                      +|||.|+ |.+|...++.+...|.+|+++++++++..++.  .+...+. |..+++.  +...++|+||.++|..     
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~   77 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDLTL--SDLSDQNVVVDAYGISPDEAE   77 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTTTTT
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccChhh--hhhcCCCEEEECCcCCccccc
Confidence            6899997 99999999999999999999999987665442  3443322 3333333  4557899999999853     


Q ss_pred             ---ccHHHHHHhhccC--CEEEEEcCC
Q 021300          259 ---HPLMPLIGLLKSQ--GKLVLVGAP  280 (314)
Q Consensus       259 ---~~~~~~~~~l~~~--G~~v~~G~~  280 (314)
                         .....+++.++..  ++++.+++.
T Consensus        78 ~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           78 KHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             SHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             hHHHHHHHHHHHHHhcCCceEEEEecc
Confidence               1235566777654  789988764

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.39  E-value=0.0016  Score=56.01  Aligned_cols=100  Identities=15%  Similarity=0.214  Sum_probs=66.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v-~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~  247 (314)
                      .+.++||.|+ |++|.+.++.+...|++|+++ .++.++.+++.+++   +.+..   .|-.+++.+.++       .+.
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5788999987 999999999999999999986 77776665555443   43332   244455433332       357


Q ss_pred             ccEEEEccCCcc-------------------------cHHHHHHhhcc--CCEEEEEcCCCC
Q 021300          248 MDGIIDTVSAVH-------------------------PLMPLIGLLKS--QGKLVLVGAPEK  282 (314)
Q Consensus       248 ~d~v~d~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~G~~~~  282 (314)
                      +|++|+++|...                         ..+.+++.|+.  +|+++.+++..+
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~  144 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGS  144 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGG
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhh
Confidence            999999997310                         12334445543  589999987543

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.38  E-value=0.0013  Score=56.55  Aligned_cols=76  Identities=21%  Similarity=0.285  Sum_probs=55.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---C-CcEE---ecCCCHHHHHHH-------cC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---G-ADSF---LVSRDQDEMQAA-------MG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---g-a~~~---v~~~~~~~~~~~-------~~  246 (314)
                      -.|.++||.|+ |++|.+.++.+...|++|+++.++.++.+++.+++   + .+..   .|-.+++.+.++       .+
T Consensus         8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (262)
T 3pk0_A            8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG   87 (262)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            35788999887 99999999999999999999999988776665544   2 2221   244454433332       34


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      ++|++++++|.
T Consensus        88 ~id~lvnnAg~   98 (262)
T 3pk0_A           88 GIDVVCANAGV   98 (262)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999983

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.38  E-value=0.0024  Score=55.00  Aligned_cols=75  Identities=16%  Similarity=0.191  Sum_probs=54.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH----cCCc-EE---ecCCCHHHHHHH-------cC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGAD-SF---LVSRDQDEMQAA-------MG  246 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~----~ga~-~~---v~~~~~~~~~~~-------~~  246 (314)
                      .|.++||.|+ +++|.+.++.+...|++|+++.++.++.+++.++    .+.. ..   .|-.+++.+.++       .+
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            5788999987 9999999999999999999999998876665544    3322 22   244555433322       35


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      .+|++++++|.
T Consensus        87 ~id~lvnnAg~   97 (265)
T 3lf2_A           87 CASILVNNAGQ   97 (265)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.38  E-value=0.0022  Score=56.31  Aligned_cols=100  Identities=18%  Similarity=0.190  Sum_probs=67.3

Q ss_pred             CCCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCChhhH---HHHHHHcCCcEE--ecCCCHHHHHHH-------cC
Q 021300          182 KPGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSKK---SEAIERLGADSF--LVSRDQDEMQAA-------MG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g--~vG~~a~~~a~~~g~~vi~v~~~~~~~---~~~~~~~ga~~~--v~~~~~~~~~~~-------~~  246 (314)
                      -.|.++||.|+ |  ++|.+.++.+...|++|+++.++++..   .++.++.+....  .|-.+++.+.++       .+
T Consensus        28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (296)
T 3k31_A           28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG  107 (296)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35789999997 5  999999999999999999999886433   333444453322  244555433332       25


Q ss_pred             CccEEEEccCCcc-----------------------------cHHHHHHhhccCCEEEEEcCCC
Q 021300          247 TMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       247 ~~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      .+|++|+++|...                             ..+.++..|+++|+++.+++..
T Consensus       108 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~  171 (296)
T 3k31_A          108 SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYG  171 (296)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGG
T ss_pred             CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehh
Confidence            7999999998431                             1223444556689999998754

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.38  E-value=0.0016  Score=55.29  Aligned_cols=75  Identities=17%  Similarity=0.213  Sum_probs=54.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--c--E-EecCCCHHHHHHH-------cCCcc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--D--S-FLVSRDQDEMQAA-------MGTMD  249 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~--~-~v~~~~~~~~~~~-------~~~~d  249 (314)
                      .+.++||.|+ |.+|...++.+...|++|+++.+++++.+++.+++..  .  . ..|-.+++.+.++       .+.+|
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4678999987 9999999999999999999999998777666665531  1  1 1244555443332       24699


Q ss_pred             EEEEccCC
Q 021300          250 GIIDTVSA  257 (314)
Q Consensus       250 ~v~d~~g~  257 (314)
                      ++|.++|.
T Consensus        85 ~li~~Ag~   92 (251)
T 1zk4_A           85 TLVNNAGI   92 (251)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.38  E-value=0.0022  Score=55.77  Aligned_cols=99  Identities=21%  Similarity=0.262  Sum_probs=66.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhh-HHHH---HHHcCCcEE---ecCCCHHHHHH-------HcCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEA---IERLGADSF---LVSRDQDEMQA-------AMGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~-~~~~---~~~~ga~~~---v~~~~~~~~~~-------~~~~  247 (314)
                      .|.++||.|+ |++|.+.++.+...|++|+++.++.++ .+++   .++.+.+..   .|-.+++.+.+       ..++
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  107 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK  107 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 999999999999999999999888653 2222   234454332   24444433322       2357


Q ss_pred             ccEEEEccCCcc-------------------------cHHHHHHhhccCCEEEEEcCCC
Q 021300          248 MDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       248 ~d~v~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      +|++|+++|...                         .++.+++.|+.+|+++.+++..
T Consensus       108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~  166 (283)
T 1g0o_A          108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSIT  166 (283)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGG
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechh
Confidence            999999998421                         1234455566679999998753

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.37  E-value=0.0016  Score=56.58  Aligned_cols=99  Identities=18%  Similarity=0.244  Sum_probs=66.7

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEEe---cCCCHHH-------HHHHcCC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSFL---VSRDQDE-------MQAAMGT  247 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~v---~~~~~~~-------~~~~~~~  247 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|+++.+++++.+++.+++   +.+..+   |-.+++.       +.+. +.
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-g~  109 (275)
T 4imr_A           31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI-AP  109 (275)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-SC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-CC
Confidence            35788999987 99999999999999999999999887665555443   433222   3333322       2222 58


Q ss_pred             ccEEEEccCCcc-------------------------cHHHHHHhh--ccCCEEEEEcCCC
Q 021300          248 MDGIIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAPE  281 (314)
Q Consensus       248 ~d~v~d~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~G~~~  281 (314)
                      +|++|+++|...                         .++.+++.|  +..|+++.+++..
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~  170 (275)
T 4imr_A          110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSIN  170 (275)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHH
Confidence            999999998420                         122344444  3468999998754

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.37  E-value=0.00078  Score=59.90  Aligned_cols=75  Identities=20%  Similarity=0.285  Sum_probs=54.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CC--cE---EecCCCHHHHHHH-------cC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA--DS---FLVSRDQDEMQAA-------MG  246 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga--~~---~v~~~~~~~~~~~-------~~  246 (314)
                      .|.++||.|+ |++|...++.+...|++|++++++.++.+++.+++   +.  ..   ..|-.+++.+.++       .+
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            5789999997 99999999999999999999999988776665543   22  22   2244555433332       24


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      .+|++|+++|.
T Consensus        87 ~id~lv~nAg~   97 (319)
T 3ioy_A           87 PVSILCNNAGV   97 (319)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999983

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.37  E-value=0.00081  Score=59.58  Aligned_cols=109  Identities=15%  Similarity=0.142  Sum_probs=71.2

Q ss_pred             hhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC---hhhHHHHHHHcC----Cc-EEecCCCHHHHHH
Q 021300          173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS---PSKKSEAIERLG----AD-SFLVSRDQDEMQA  243 (314)
Q Consensus       173 ~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~---~~~~~~~~~~~g----a~-~~v~~~~~~~~~~  243 (314)
                      .+|...+.--.+.++||+|+|+.|.+++..+...|+ +++++.|+   .++.++++++++    .. ..++..+.++..+
T Consensus       137 ~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~  216 (312)
T 3t4e_A          137 RAIKESGFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTE  216 (312)
T ss_dssp             HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH
T ss_pred             HHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHh
Confidence            344443322468899999999999999999999998 89999999   777777766554    22 2334444333334


Q ss_pred             HcCCccEEEEccCCcc--cHHH----HHHhhccCCEEEEEcCCC
Q 021300          244 AMGTMDGIIDTVSAVH--PLMP----LIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       244 ~~~~~d~v~d~~g~~~--~~~~----~~~~l~~~G~~v~~G~~~  281 (314)
                      ....+|+||++++...  .-..    -...++++..++++-..+
T Consensus       217 ~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P  260 (312)
T 3t4e_A          217 ALASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNP  260 (312)
T ss_dssp             HHHHCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCSS
T ss_pred             hccCceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccCC
Confidence            4456999999986431  0000    124567777777775543

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=97.37  E-value=0.0019  Score=55.31  Aligned_cols=99  Identities=18%  Similarity=0.285  Sum_probs=67.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHC--CCeEEEEeCChhhHHHHHHHcCCcEEe---cCCCHHHHHHH-------cCCccE
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERLGADSFL---VSRDQDEMQAA-------MGTMDG  250 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~--g~~vi~v~~~~~~~~~~~~~~ga~~~v---~~~~~~~~~~~-------~~~~d~  250 (314)
                      |.++||.|+ +++|.+.++.+...  |++|+++.++.++.+++.++++....+   |-.+++.+.++       .+.+|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            568899987 99999888776655  578988999998888887777654322   44455433332       347999


Q ss_pred             EEEccCCcc--------------------------cHHHHHHhhc-cCCEEEEEcCCCC
Q 021300          251 IIDTVSAVH--------------------------PLMPLIGLLK-SQGKLVLVGAPEK  282 (314)
Q Consensus       251 v~d~~g~~~--------------------------~~~~~~~~l~-~~G~~v~~G~~~~  282 (314)
                      +++++|...                          ..+.+++.|+ .+|+++.+++..+
T Consensus        82 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~  140 (254)
T 3kzv_A           82 LVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDAC  140 (254)
T ss_dssp             EEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCC
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchh
Confidence            999998421                          1222344443 4699999987654

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=97.36  E-value=0.00056  Score=59.40  Aligned_cols=97  Identities=19%  Similarity=0.233  Sum_probs=73.1

Q ss_pred             cccchhhhhhhhhhHhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 021300          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (314)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag-~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~  240 (314)
                      ..+||....+...+++...--.|.+++|+|.| .+|..+++++...|++|++.-+...                     .
T Consensus       139 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~---------------------~  197 (285)
T 3l07_A          139 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT---------------------D  197 (285)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------S
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------h
Confidence            35677777777778777655689999999985 5899999999999999877654322                     1


Q ss_pred             HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       241 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      +.+....+|++|.++|.+..+  --+.++++-.++.+|...
T Consensus       198 L~~~~~~ADIVI~Avg~p~~I--~~~~vk~GavVIDvgi~~  236 (285)
T 3l07_A          198 LKSHTTKADILIVAVGKPNFI--TADMVKEGAVVIDVGINH  236 (285)
T ss_dssp             HHHHHTTCSEEEECCCCTTCB--CGGGSCTTCEEEECCCEE
T ss_pred             HHHhcccCCEEEECCCCCCCC--CHHHcCCCcEEEEecccC
Confidence            234456789999999877533  235678999999999764

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.36  E-value=0.0013  Score=57.22  Aligned_cols=76  Identities=14%  Similarity=0.231  Sum_probs=55.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHH-------cCC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~~-------~~~  247 (314)
                      -.|.++||.|+ |++|.+.++.+...|++|+++.+++++.+++.+++   +.+.   ..|-.+++.+.++       .++
T Consensus        30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  109 (276)
T 3r1i_A           30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG  109 (276)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999987 99999999999999999999999987766665543   3221   2244555443332       247


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus       110 iD~lvnnAg~  119 (276)
T 3r1i_A          110 IDIAVCNAGI  119 (276)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=97.36  E-value=0.00076  Score=57.15  Aligned_cols=102  Identities=15%  Similarity=0.212  Sum_probs=71.4

Q ss_pred             hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHcCC----cEEe-cCCCHHHHHHHcC
Q 021300          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGA----DSFL-VSRDQDEMQAAMG  246 (314)
Q Consensus       174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~ga----~~~v-~~~~~~~~~~~~~  246 (314)
                      .+.... ++||++||=+|+|+ |..+..+++..|-  +|+.++.+++..+.+.+....    ..+. +..+++......+
T Consensus        69 gl~~l~-ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~  146 (233)
T 4df3_A           69 GLIELP-VKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVE  146 (233)
T ss_dssp             TCSCCC-CCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCC
T ss_pred             chhhcC-CCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccc
Confidence            344444 79999999999875 7888899998764  899999999888777655431    2222 2333444334445


Q ss_pred             CccEEEEccCCcc----cHHHHHHhhccCCEEEEE
Q 021300          247 TMDGIIDTVSAVH----PLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       247 ~~d~v~d~~g~~~----~~~~~~~~l~~~G~~v~~  277 (314)
                      .+|+||.......    .+..+.+.|+++|+++++
T Consensus       147 ~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          147 GVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             CEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            7999887655432    366677899999998875

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.35  E-value=0.002  Score=55.93  Aligned_cols=76  Identities=20%  Similarity=0.295  Sum_probs=53.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-------------ChhhHHHHHHH---cCCcEE---ecCCCHHHH
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-------------SPSKKSEAIER---LGADSF---LVSRDQDEM  241 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~-------------~~~~~~~~~~~---~ga~~~---v~~~~~~~~  241 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|+++++             +.++.+++.+.   .+....   .|-.+++.+
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            46789999997 99999999999999999999987             45554444333   343322   244555433


Q ss_pred             HHH-------cCCccEEEEccCC
Q 021300          242 QAA-------MGTMDGIIDTVSA  257 (314)
Q Consensus       242 ~~~-------~~~~d~v~d~~g~  257 (314)
                      .++       .+.+|++|+++|.
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg~  115 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCC
Confidence            332       3479999999884

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.35  E-value=0.0022  Score=54.92  Aligned_cols=75  Identities=15%  Similarity=0.178  Sum_probs=53.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .|.++||.|+ |++|.+.++.+...|++|+++.+++++.+++.+++   +.+..   .|-.+++.+.++       .+++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   92 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV   92 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4788999987 99999999999999999999999987665554433   43321   244454433322       2479


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|+++|.
T Consensus        93 D~lv~~Ag~  101 (260)
T 2zat_A           93 DILVSNAAV  101 (260)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.35  E-value=0.0013  Score=52.49  Aligned_cols=99  Identities=15%  Similarity=0.185  Sum_probs=69.0

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHH---HcCCc--EEecCCCHHHHHHHcCCccEEEEc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIE---RLGAD--SFLVSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~---~~ga~--~~v~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      ++++++||-+|+|. |..+..+++.. +.+++.++.++...+.+.+   +.+..  ..+..+..+.+....+.||+|+..
T Consensus        23 ~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~  101 (178)
T 3hm2_A           23 PKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIG  101 (178)
T ss_dssp             CCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEEC
T ss_pred             ccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEEC
Confidence            68999999999986 88888888886 5689999998876655433   33433  222222223322222679999976


Q ss_pred             cCCc--ccHHHHHHhhccCCEEEEEcCC
Q 021300          255 VSAV--HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       255 ~g~~--~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      ....  ..+..+.+.|+++|+++.....
T Consensus       102 ~~~~~~~~l~~~~~~L~~gG~l~~~~~~  129 (178)
T 3hm2_A          102 GGLTAPGVFAAAWKRLPVGGRLVANAVT  129 (178)
T ss_dssp             C-TTCTTHHHHHHHTCCTTCEEEEEECS
T ss_pred             CcccHHHHHHHHHHhcCCCCEEEEEeec
Confidence            5433  3688999999999999987654

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.35  E-value=0.0024  Score=53.63  Aligned_cols=72  Identities=18%  Similarity=0.213  Sum_probs=55.6

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc---EEecCCCHHHHHHHc----CCccEEEEccCC
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD---SFLVSRDQDEMQAAM----GTMDGIIDTVSA  257 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~---~~v~~~~~~~~~~~~----~~~d~v~d~~g~  257 (314)
                      ++||.|+ |++|.+.+..+...|++|+++.+++++.+++.++++.+   ...|-.+++.+.++.    +.+|++++++|.
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag~   82 (230)
T 3guy_A            3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAGS   82 (230)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCCC
T ss_pred             EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCCc
Confidence            5889987 99999999999999999999999999888888777532   223555565555443    346999999883

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.34  E-value=0.0033  Score=54.24  Aligned_cols=100  Identities=21%  Similarity=0.284  Sum_probs=67.5

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC-hhhHHHHH---HHcCCcEE---ecCCCHHHHHHH-------cC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAI---ERLGADSF---LVSRDQDEMQAA-------MG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~-~~~~~~~~---~~~ga~~~---v~~~~~~~~~~~-------~~  246 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|+++.+. .+..+++.   ++.+.+..   .|-.+++.+.++       .+
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35788999987 999999999999999999987765 33333333   33454332   244444433322       24


Q ss_pred             CccEEEEccCCcc-------------------------cHHHHHHhhccCCEEEEEcCCC
Q 021300          247 TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       247 ~~d~v~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      .+|++|+++|...                         ..+.+++.|+++|+++.+++..
T Consensus        96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  155 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT  155 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence            7999999988421                         2344666777899999998754

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.34  E-value=0.0011  Score=57.67  Aligned_cols=95  Identities=13%  Similarity=0.029  Sum_probs=68.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCC--cEEecCCCHHHHHHHcCCccEEEEccCCc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA--DSFLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga--~~~v~~~~~~~~~~~~~~~d~v~d~~g~~  258 (314)
                      -.+.+++|+|+|++|.+++..+...|+ +++++.|+.++.++++++++.  ..++...+   +.  ...+|+||++++..
T Consensus       118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~---l~--~~~~DivInaTp~g  192 (272)
T 3pwz_A          118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA---LE--GQSFDIVVNATSAS  192 (272)
T ss_dssp             CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG---GT--TCCCSEEEECSSGG
T ss_pred             ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH---hc--ccCCCEEEECCCCC
Confidence            468899999999999999999999996 899999999998888888774  22222222   11  16799999998643


Q ss_pred             cc---HHHHHHhhccCCEEEEEcCCC
Q 021300          259 HP---LMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       259 ~~---~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      ..   .......++++..++++-..+
T Consensus       193 m~~~~~~i~~~~l~~~~~V~DlvY~P  218 (272)
T 3pwz_A          193 LTADLPPLPADVLGEAALAYELAYGK  218 (272)
T ss_dssp             GGTCCCCCCGGGGTTCSEEEESSCSC
T ss_pred             CCCCCCCCCHHHhCcCCEEEEeecCC
Confidence            10   001234677888888886543

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.34  E-value=0.0016  Score=56.46  Aligned_cols=76  Identities=16%  Similarity=0.194  Sum_probs=54.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc---EEecCCCHHHHHHH-------cCC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~---~~v~~~~~~~~~~~-------~~~  247 (314)
                      -.+.++||.|+ +++|.+.++.+...|++|+++.++.++.+++.+++   +..   ...|-.+++.+.++       .+.
T Consensus        26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (270)
T 3ftp_A           26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA  105 (270)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            35678999887 99999999999999999999999987766554443   322   12355555433332       247


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus       106 iD~lvnnAg~  115 (270)
T 3ftp_A          106 LNVLVNNAGI  115 (270)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=97.33  E-value=0.0025  Score=55.45  Aligned_cols=75  Identities=11%  Similarity=0.216  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-ChhhHHHHHHHc----CCcEEe---cCCCHHHHHHH-------cC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERL----GADSFL---VSRDQDEMQAA-------MG  246 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~-~~~~~~~~~~~~----ga~~~v---~~~~~~~~~~~-------~~  246 (314)
                      .+.++||.|+ |++|.+.++.+...|++|+++.+ .+++.+++.+++    +....+   |-.+++.+.++       .+
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  103 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG  103 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence            4678999987 99999999999999999999988 555544444433    333222   44444433322       34


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      ++|++|+++|.
T Consensus       104 ~iD~lv~nAg~  114 (281)
T 3v2h_A          104 GADILVNNAGV  114 (281)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.32  E-value=0.0012  Score=56.77  Aligned_cols=75  Identities=21%  Similarity=0.230  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-ChhhHHHHHHH---cCCcEE---ecCCCHHHHHHHc-------CC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIER---LGADSF---LVSRDQDEMQAAM-------GT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~-~~~~~~~~~~~---~ga~~~---v~~~~~~~~~~~~-------~~  247 (314)
                      .+.++||.|+ |.+|...++.+...|++|+++.+ ++++.+++.++   .+.+..   .|-.+++.+.++.       ++
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   99 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   99 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 99999999999999999999998 66555444333   354322   2445554443332       47


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus       100 ~d~vi~~Ag~  109 (274)
T 1ja9_A          100 LDFVMSNSGM  109 (274)
T ss_dssp             EEEEECCCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=97.31  E-value=0.0022  Score=55.62  Aligned_cols=73  Identities=25%  Similarity=0.316  Sum_probs=55.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHHc------CCccEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAAM------GTMDGII  252 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~~------~~~d~v~  252 (314)
                      .|.++||.|+ +++|.+.++.+...|++|++++++.++.+++.++++....   .|-.+.+.+.++.      +++|+++
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv  108 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV  108 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence            4678999997 9999999999999999999999999988888888875432   2444444333221      3689999


Q ss_pred             Ecc
Q 021300          253 DTV  255 (314)
Q Consensus       253 d~~  255 (314)
                      .+.
T Consensus       109 ~~a  111 (281)
T 3ppi_A          109 VAH  111 (281)
T ss_dssp             ECC
T ss_pred             Ecc
Confidence            883

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.31  E-value=0.0024  Score=54.50  Aligned_cols=72  Identities=19%  Similarity=0.317  Sum_probs=54.7

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHHc-------CCccEEEEc
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAAM-------GTMDGIIDT  254 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~~-------~~~d~v~d~  254 (314)
                      ++||.|+ |++|.+.++.+...|++|+++.+++++.+++.++++.+..   .|-.+++.+.++.       +++|++|++
T Consensus         2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnn   81 (248)
T 3asu_A            2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNN   81 (248)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEEC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            6788887 9999999999999999999999998887777777654322   2455555544432       369999999


Q ss_pred             cCC
Q 021300          255 VSA  257 (314)
Q Consensus       255 ~g~  257 (314)
                      +|.
T Consensus        82 Ag~   84 (248)
T 3asu_A           82 AGL   84 (248)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            874

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.31  E-value=0.0037  Score=53.31  Aligned_cols=75  Identities=20%  Similarity=0.281  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.++||.|+ |.+|...++.+...|++|+++++++++..++.+++   +.+.   ..|-.+++.+.++       .+++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   91 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV   91 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999997 99999999999999999999999987665544433   4332   1244555443332       2479


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|.++|.
T Consensus        92 d~vi~~Ag~  100 (260)
T 3awd_A           92 DILVACAGI  100 (260)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.31  E-value=0.0008  Score=56.04  Aligned_cols=93  Identities=14%  Similarity=0.166  Sum_probs=67.5

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE-EecCCC-HHHHHHHcCCccEEEEccCCcc---
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRD-QDEMQAAMGTMDGIIDTVSAVH---  259 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~-~v~~~~-~~~~~~~~~~~d~v~d~~g~~~---  259 (314)
                      +|||.|+ |.+|...++.+...|.+|+++++++++...+   .+... ..|..+ ++.+.+..+++|+||.++|...   
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~~   78 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKSL   78 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTSSC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCCCc
Confidence            6899997 9999999999999999999999998654322   12222 235566 7777777789999999998532   


Q ss_pred             ------cHHHHHHhhccC--CEEEEEcCCC
Q 021300          260 ------PLMPLIGLLKSQ--GKLVLVGAPE  281 (314)
Q Consensus       260 ------~~~~~~~~l~~~--G~~v~~G~~~  281 (314)
                            ....+++.++..  ++++.+++..
T Consensus        79 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  108 (219)
T 3dqp_A           79 LKVDLYGAVKLMQAAEKAEVKRFILLSTIF  108 (219)
T ss_dssp             CCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             EeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence                  134455555543  5899988754

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.31  E-value=0.0018  Score=56.94  Aligned_cols=75  Identities=19%  Similarity=0.320  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CC---cEE---ecCCCHHHHHHH-------c
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA---DSF---LVSRDQDEMQAA-------M  245 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga---~~~---v~~~~~~~~~~~-------~  245 (314)
                      .|.++||.|+ |++|.+.++.+...|++|+++.+++++.+++.+++   +.   ...   .|-.+++.+.++       .
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  104 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF  104 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            4678999887 99999999999999999999999987766554443   32   221   244555433332       2


Q ss_pred             CCccEEEEccCC
Q 021300          246 GTMDGIIDTVSA  257 (314)
Q Consensus       246 ~~~d~v~d~~g~  257 (314)
                      +++|++|+++|.
T Consensus       105 g~iD~lvnnAG~  116 (297)
T 1xhl_A          105 GKIDILVNNAGA  116 (297)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999873

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.30  E-value=0.0036  Score=54.45  Aligned_cols=75  Identities=16%  Similarity=0.208  Sum_probs=53.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.++||.|+ |++|...++.+...|++|+++.+++++.+++.+++   +.+..   .|-.+++.+.++       .+++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i  122 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV  122 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999997 99999999999888999999888877665554443   43322   244555444332       2479


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|.++|.
T Consensus       123 d~li~~Ag~  131 (285)
T 2c07_A          123 DILVNNAGI  131 (285)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.30  E-value=0.0019  Score=55.18  Aligned_cols=97  Identities=15%  Similarity=0.261  Sum_probs=63.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .|.++||.|+ |++|...++.+...|++|+++.++++  ++..+   +.+.+..   .|-.+++.+.++       .+++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGV   80 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            3678999987 99999999999999999999988765  22222   2344332   244445443333       2479


Q ss_pred             cEEEEccCCcc-------------------------cHHHHHHhhcc--CCEEEEEcCCC
Q 021300          249 DGIIDTVSAVH-------------------------PLMPLIGLLKS--QGKLVLVGAPE  281 (314)
Q Consensus       249 d~v~d~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~G~~~  281 (314)
                      |++|+++|...                         ....+++.|+.  .|+++.+++..
T Consensus        81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  140 (255)
T 2q2v_A           81 DILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVH  140 (255)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGG
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCch
Confidence            99999987321                         12334455533  48999998754

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.30  E-value=0.0029  Score=54.29  Aligned_cols=75  Identities=21%  Similarity=0.285  Sum_probs=54.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHHc--------CC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAAM--------GT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~~--------~~  247 (314)
                      .+.++||.|+ |.+|...++.+...|++|+++.+++++.+++.+++   +....   .|-.+++.+.++.        ++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999987 99999999999999999999999987665554443   43321   2444444333322        67


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus        93 id~li~~Ag~  102 (266)
T 1xq1_A           93 LDILINNLGA  102 (266)
T ss_dssp             CSEEEEECCC
T ss_pred             CcEEEECCCC
Confidence            9999999884

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=97.29  E-value=0.00068  Score=58.87  Aligned_cols=96  Identities=22%  Similarity=0.257  Sum_probs=72.7

Q ss_pred             ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (314)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~  241 (314)
                      .+||....+...+++...--.|.+++|+|. +.+|..+++++...|++|++..+....                     +
T Consensus       139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~---------------------L  197 (285)
T 3p2o_A          139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKD---------------------L  197 (285)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSC---------------------H
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchh---------------------H
Confidence            467777777777877765568999999998 558999999999999998887654322                     2


Q ss_pred             HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      .+....+|++|.++|.+..+  --+.++++..++.+|...
T Consensus       198 ~~~~~~ADIVI~Avg~p~~I--~~~~vk~GavVIDVgi~~  235 (285)
T 3p2o_A          198 SLYTRQADLIIVAAGCVNLL--RSDMVKEGVIVVDVGINR  235 (285)
T ss_dssp             HHHHTTCSEEEECSSCTTCB--CGGGSCTTEEEEECCCEE
T ss_pred             HHHhhcCCEEEECCCCCCcC--CHHHcCCCeEEEEeccCc
Confidence            34456789999999976533  235678899999999763

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.29  E-value=0.00086  Score=57.96  Aligned_cols=74  Identities=14%  Similarity=0.169  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-EEecCCCHHHHHHH-------cCCccEEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID  253 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~-~~v~~~~~~~~~~~-------~~~~d~v~d  253 (314)
                      .+.++||.|+ |++|.+.++.+...|++|+++.++.++.+++... ... ...|-.+++.+.++       .+++|++|+
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn   93 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLP-NTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN   93 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCT-TEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcC-CceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            4678999997 9999999999999999999999987655433111 111 12344554433322       347999999


Q ss_pred             ccCC
Q 021300          254 TVSA  257 (314)
Q Consensus       254 ~~g~  257 (314)
                      ++|.
T Consensus        94 nAg~   97 (266)
T 3p19_A           94 NAGM   97 (266)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9984

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.29  E-value=0.0027  Score=54.30  Aligned_cols=74  Identities=19%  Similarity=0.291  Sum_probs=52.5

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhh--HHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCC
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK--KSEAIERL---GADSF---LVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~--~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~  247 (314)
                      +.++||.|+ |++|.+.++.+...|++|+++.+++++  .+++.+++   +.+..   .|-.+++.+.++       .++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            568999997 999999999888889999999988776  55554443   43322   244555433332       247


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus        82 iD~lv~nAg~   91 (258)
T 3a28_C           82 FDVLVNNAGI   91 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=97.28  E-value=0.0014  Score=56.95  Aligned_cols=97  Identities=19%  Similarity=0.124  Sum_probs=73.4

Q ss_pred             cccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 021300          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (314)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~  240 (314)
                      ..+||....+...+++...--.|.+++|+|. +.+|..+++++...|++|++..+....                     
T Consensus       139 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~---------------------  197 (286)
T 4a5o_A          139 LLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRD---------------------  197 (286)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSC---------------------
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcC---------------------
Confidence            3567777777778887765568999999997 569999999999999999887553322                     


Q ss_pred             HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       241 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      +.+....+|++|.++|.+..+.  -+.++++..++.+|...
T Consensus       198 L~~~~~~ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~~  236 (286)
T 4a5o_A          198 LADHVSRADLVVVAAGKPGLVK--GEWIKEGAIVIDVGINR  236 (286)
T ss_dssp             HHHHHHTCSEEEECCCCTTCBC--GGGSCTTCEEEECCSCS
T ss_pred             HHHHhccCCEEEECCCCCCCCC--HHHcCCCeEEEEecccc
Confidence            2233456899999998765332  35679999999999864

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.27  E-value=0.0031  Score=53.86  Aligned_cols=101  Identities=16%  Similarity=0.216  Sum_probs=66.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-----C-Cc--E-EecCCCHHHHHHH-------
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----G-AD--S-FLVSRDQDEMQAA-------  244 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~-----g-a~--~-~v~~~~~~~~~~~-------  244 (314)
                      ..+.++||.|+ +++|.+.++.+...|++|+++.++.++.+++.+++     + ..  . ..|-.+++.+.++       
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            35688999997 99999999999888999999999988776665543     2 21  1 1244554433322       


Q ss_pred             cCCccEEEEccCCcc------------------------cHHHHHHhh--ccCCEEEEEcCCCC
Q 021300          245 MGTMDGIIDTVSAVH------------------------PLMPLIGLL--KSQGKLVLVGAPEK  282 (314)
Q Consensus       245 ~~~~d~v~d~~g~~~------------------------~~~~~~~~l--~~~G~~v~~G~~~~  282 (314)
                      .+.+|++|+++|...                        ..+.+++.|  +..|+++.+++..+
T Consensus        85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  148 (250)
T 3nyw_A           85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAA  148 (250)
T ss_dssp             HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC---
T ss_pred             cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHh
Confidence            357999999998420                        122334444  34689999987543

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.27  E-value=0.0036  Score=54.29  Aligned_cols=99  Identities=17%  Similarity=0.255  Sum_probs=66.5

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC------------hhhHHHHH---HHcCCcEE---ecCCCHHHHH
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS------------PSKKSEAI---ERLGADSF---LVSRDQDEMQ  242 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~------------~~~~~~~~---~~~ga~~~---v~~~~~~~~~  242 (314)
                      -.|.++||.|+ +++|...++.+...|++|++++++            .++.+++.   +..+.+..   .|-.+++.+.
T Consensus         8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A            8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            35789999997 999999999999999999999886            44433332   23343332   2445554433


Q ss_pred             HH-------cCCccEEEEccCCcc-----------------------cHHHHHHhhccCCEEEEEcCC
Q 021300          243 AA-------MGTMDGIIDTVSAVH-----------------------PLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       243 ~~-------~~~~d~v~d~~g~~~-----------------------~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      ++       .+.+|++|+++|...                       .+..+++.|+.+|+++.+++.
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  155 (287)
T 3pxx_A           88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSV  155 (287)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCH
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccc
Confidence            32       247999999988421                       123344555678999999874

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.27  E-value=0.00042  Score=58.61  Aligned_cols=96  Identities=15%  Similarity=0.186  Sum_probs=68.7

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCcE-EecCCCHHHHHHHcCCccEEEEccCCccc-
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVHP-  260 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~ga~~-~v~~~~~~~~~~~~~~~d~v~d~~g~~~~-  260 (314)
                      .+|||.|+ |.+|...++.+...| ++|+++++++++..++. ..++.. ..|-.+++.+.++..++|++|.+.+.... 
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~~  102 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-PTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDLD  102 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-CTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTTHH
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-cCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCchh
Confidence            57999997 999999999999999 79999999886543221 112222 23556777888888899999999886532 


Q ss_pred             --HHHHHHhhccC--CEEEEEcCCC
Q 021300          261 --LMPLIGLLKSQ--GKLVLVGAPE  281 (314)
Q Consensus       261 --~~~~~~~l~~~--G~~v~~G~~~  281 (314)
                        ...+++.++..  ++||.+++..
T Consensus       103 ~~~~~~~~~~~~~~~~~iV~iSS~~  127 (236)
T 3qvo_A          103 IQANSVIAAMKACDVKRLIFVLSLG  127 (236)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred             HHHHHHHHHHHHcCCCEEEEEecce
Confidence              34456666543  6899997743

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.26  E-value=0.0022  Score=55.54  Aligned_cols=89  Identities=22%  Similarity=0.179  Sum_probs=67.1

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc-----
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV-----  258 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~-----  258 (314)
                      +.+++|+|+|+.|.+++..+...|.+++++.|+.++.++++ +++... ....+      +. .+|+||++++..     
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~~-~~~~~------l~-~~DiVInaTp~Gm~~~~  188 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCDC-FMEPP------KS-AFDLIINATSASLHNEL  188 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCEE-ESSCC------SS-CCSEEEECCTTCCCCSC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeE-ecHHH------hc-cCCEEEEcccCCCCCCC
Confidence            88999999999999999999999999999999999988888 788543 23322      11 799999998643     


Q ss_pred             cc-HHHHHHhhccCCEEEEEcCCC
Q 021300          259 HP-LMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       259 ~~-~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      .. .......++++..++++-..+
T Consensus       189 ~l~~~~l~~~l~~~~~v~D~vY~P  212 (269)
T 3phh_A          189 PLNKEVLKGYFKEGKLAYDLAYGF  212 (269)
T ss_dssp             SSCHHHHHHHHHHCSEEEESCCSS
T ss_pred             CCChHHHHhhCCCCCEEEEeCCCC
Confidence            11 122233678888888886543

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.26  E-value=0.0023  Score=55.43  Aligned_cols=73  Identities=21%  Similarity=0.308  Sum_probs=54.6

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--cE---EecCCCHHHHHHHc-------CCccEE
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DS---FLVSRDQDEMQAAM-------GTMDGI  251 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~~---~v~~~~~~~~~~~~-------~~~d~v  251 (314)
                      .++||.|+ |++|.+.++.+...|++|+++.+++++.+++.+++..  ..   ..|-.+++.+.++.       +.+|++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            67899887 9999999999999999999999998887777666542  21   13445555544432       358999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      |+++|.
T Consensus       102 vnnAG~  107 (272)
T 2nwq_A          102 INNAGL  107 (272)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999874

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.26  E-value=0.0017  Score=55.77  Aligned_cols=98  Identities=15%  Similarity=0.266  Sum_probs=63.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEe-CChhhHHHHHHH---cCCcEE---ecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~-~~~~~~~~~~~~---~ga~~~---v~~~~~~~~~~~-------~~~  247 (314)
                      .|.++||.|+ +++|.+.++.+...|++|+++. ++.+..+++.++   .+.+..   .|-.+++.+.++       .++
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE   86 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            5788999997 9999999999999999999884 444444333333   343221   244554433322       247


Q ss_pred             ccEEEEccCCc--------------------------ccHHHHHHhhccCCEEEEEcCC
Q 021300          248 MDGIIDTVSAV--------------------------HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       248 ~d~v~d~~g~~--------------------------~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      +|++++++|..                          ...+.+++.|+++|+++.+++.
T Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~  145 (259)
T 3edm_A           87 IHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQ  145 (259)
T ss_dssp             EEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             CCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCH
Confidence            99999998732                          0122344455668899999774

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.25  E-value=0.0029  Score=55.00  Aligned_cols=74  Identities=26%  Similarity=0.306  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE----EecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS----FLVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~----~v~~~~~~~~~~~-------~~~  247 (314)
                      .|.++||.|+ |++|...++.+...|++|+++++++++.+++.+++   +...    ..|-.+++.+.++       .++
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  106 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG  106 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 99999999999999999999999988766554432   4321    1244454433322       247


Q ss_pred             ccEEEEc-cC
Q 021300          248 MDGIIDT-VS  256 (314)
Q Consensus       248 ~d~v~d~-~g  256 (314)
                      +|++|++ .|
T Consensus       107 iD~li~naag  116 (286)
T 1xu9_A          107 LDMLILNHIT  116 (286)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999998 45

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=97.25  E-value=0.0012  Score=55.21  Aligned_cols=99  Identities=23%  Similarity=0.231  Sum_probs=69.1

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCC------CeEEEEeCChhhHHHHHHH---cC-----C-cEEecCCCH-HHH--
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG------VKVTVISTSPSKKSEAIER---LG-----A-DSFLVSRDQ-DEM--  241 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g------~~vi~v~~~~~~~~~~~~~---~g-----a-~~~v~~~~~-~~~--  241 (314)
                      .++++++||-+|+|. |..+..+++..+      .+++.++.+++..+.+.+.   .+     . ..-+...+. +..  
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~  155 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEE  155 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHH
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccc
Confidence            468999999999976 888889998876      5999999998766554333   23     1 111222221 111  


Q ss_pred             -HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcC
Q 021300          242 -QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       242 -~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                       ....+.||+|+........+..+.+.|+++|+++..-.
T Consensus       156 ~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~  194 (227)
T 2pbf_A          156 EKKELGLFDAIHVGASASELPEILVDLLAENGKLIIPIE  194 (227)
T ss_dssp             HHHHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred             cCccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence             02245799999887766668899999999999888744

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.25  E-value=0.0042  Score=53.77  Aligned_cols=76  Identities=21%  Similarity=0.320  Sum_probs=52.8

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-------------ChhhHHHHHH---HcCCcEE---ecCCCHHHH
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-------------SPSKKSEAIE---RLGADSF---LVSRDQDEM  241 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~-------------~~~~~~~~~~---~~ga~~~---v~~~~~~~~  241 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|+++++             +.++.+++.+   ..+....   .|-.+++.+
T Consensus         9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A            9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            35788999997 99999999999999999999987             4444444433   3343322   244555433


Q ss_pred             HHH-------cCCccEEEEccCC
Q 021300          242 QAA-------MGTMDGIIDTVSA  257 (314)
Q Consensus       242 ~~~-------~~~~d~v~d~~g~  257 (314)
                      .++       .+.+|++|+++|.
T Consensus        89 ~~~~~~~~~~~g~id~lvnnAg~  111 (277)
T 3tsc_A           89 RKVVDDGVAALGRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCC
Confidence            332       2579999999984

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=97.24  E-value=0.00082  Score=55.01  Aligned_cols=95  Identities=16%  Similarity=0.187  Sum_probs=66.6

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE-EecCCCHHHHHHHcCCccEEEEccCCcc---
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~-~v~~~~~~~~~~~~~~~d~v~d~~g~~~---  259 (314)
                      .++||.|+ |.+|...++.+...|.+|+++++++++...+. ..+... ..|..+++.+.+..+++|+||.+++...   
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   82 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLS   82 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCCS
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-CCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCCC
Confidence            68999998 99999999999989999999999876542210 112222 2355667777777788999999998542   


Q ss_pred             -------cHHHHHHhhcc--CCEEEEEcCC
Q 021300          260 -------PLMPLIGLLKS--QGKLVLVGAP  280 (314)
Q Consensus       260 -------~~~~~~~~l~~--~G~~v~~G~~  280 (314)
                             ....+++.+++  -++++.+++.
T Consensus        83 ~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~  112 (206)
T 1hdo_A           83 PTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (206)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             ccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence                   13445555543  3588888764

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.24  E-value=0.00086  Score=58.30  Aligned_cols=95  Identities=20%  Similarity=0.169  Sum_probs=69.3

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCCcE-EecCCCHHHHHHHcCCccEEEEccCCcc---
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga~~-~v~~~~~~~~~~~~~~~d~v~d~~g~~~---  259 (314)
                      +|||.|+ |.+|...++.+... |.+|+++++++++...+ ...+... ..|..+++.+.+...++|+||.+++...   
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~   80 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-WRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSF   80 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-GBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSHH
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-hhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccch
Confidence            5899998 99999999998887 89999999998765333 1234433 2466778888888889999999988532   


Q ss_pred             ----cHHHHHHhhccC--CEEEEEcCCC
Q 021300          260 ----PLMPLIGLLKSQ--GKLVLVGAPE  281 (314)
Q Consensus       260 ----~~~~~~~~l~~~--G~~v~~G~~~  281 (314)
                          ....+++.++..  ++++.++..+
T Consensus        81 ~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           81 KRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             HHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             hhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence                234556666554  4788887654

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=97.24  E-value=0.0011  Score=57.22  Aligned_cols=95  Identities=13%  Similarity=0.082  Sum_probs=71.3

Q ss_pred             cccchhhhhhhhhhHhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 021300          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (314)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag-~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~  240 (314)
                      ..+||+.......+++..  -.|.+++|+|.| .+|..+++++...|++|++..+......                   
T Consensus       130 ~~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~-------------------  188 (276)
T 3ngx_A          130 FLVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIG-------------------  188 (276)
T ss_dssp             SSCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------
T ss_pred             CCCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHH-------------------
Confidence            356777777777888777  689999999985 6999999999999999988765432222                   


Q ss_pred             HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       241 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                        +....+|++|.++|.+..+.  -+.++++..++.+|...
T Consensus       189 --~~~~~ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~~  225 (276)
T 3ngx_A          189 --SMTRSSKIVVVAVGRPGFLN--REMVTPGSVVIDVGINY  225 (276)
T ss_dssp             --HHHHHSSEEEECSSCTTCBC--GGGCCTTCEEEECCCEE
T ss_pred             --HhhccCCEEEECCCCCcccc--HhhccCCcEEEEeccCc
Confidence              23344889999998765332  24578999999999864

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.23  E-value=0.0028  Score=55.56  Aligned_cols=75  Identities=24%  Similarity=0.297  Sum_probs=55.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC----cE---EecCCCHHHHHH-------HcCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA----DS---FLVSRDQDEMQA-------AMGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga----~~---~v~~~~~~~~~~-------~~~~  247 (314)
                      .|.++||.|+ |++|.+.++.+...|++|+++.++.++.+++.+++..    +.   ..|-.+++.+.+       ..+.
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  119 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA  119 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            5788999987 9999999999999999999999998887777666531    22   124455543332       2357


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus       120 iD~lvnnAg~  129 (293)
T 3rih_A          120 LDVVCANAGI  129 (293)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999883

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.23  E-value=0.0045  Score=53.82  Aligned_cols=76  Identities=21%  Similarity=0.283  Sum_probs=53.0

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC----------------hhhHHHHHHH---cCCcEE---ecCCCH
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS----------------PSKKSEAIER---LGADSF---LVSRDQ  238 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~----------------~~~~~~~~~~---~ga~~~---v~~~~~  238 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|++++++                .++.+++.+.   .+....   .|-.++
T Consensus         9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A            9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            35789999997 999999999999999999999876                4444444433   233322   244555


Q ss_pred             HHHHHH-------cCCccEEEEccCC
Q 021300          239 DEMQAA-------MGTMDGIIDTVSA  257 (314)
Q Consensus       239 ~~~~~~-------~~~~d~v~d~~g~  257 (314)
                      +.+.++       .+.+|++|+++|.
T Consensus        89 ~~v~~~~~~~~~~~g~id~lv~nAg~  114 (286)
T 3uve_A           89 DALKAAVDSGVEQLGRLDIIVANAGI  114 (286)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCcc
Confidence            433332       2479999999883

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=97.23  E-value=0.00088  Score=58.19  Aligned_cols=97  Identities=18%  Similarity=0.145  Sum_probs=71.9

Q ss_pred             cccchhhhhhhhhhHhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 021300          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (314)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag-~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~  240 (314)
                      ..+||+.......+++...--.|.+++|+|+| .+|.-+++++...|++|++..+......+                  
T Consensus       137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~------------------  198 (288)
T 1b0a_A          137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRH------------------  198 (288)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHH------------------
T ss_pred             CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHH------------------
Confidence            35677777777777777655789999999996 58999999999999999888655433322                  


Q ss_pred             HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       241 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                         ....+|+||-++|.+..+.  -+.++++..++.+|.+.
T Consensus       199 ---~~~~ADIVI~Avg~p~lI~--~~~vk~GavVIDVgi~r  234 (288)
T 1b0a_A          199 ---HVENADLLIVAVGKPGFIP--GDWIKEGAIVIDVGINR  234 (288)
T ss_dssp             ---HHHHCSEEEECSCCTTCBC--TTTSCTTCEEEECCCEE
T ss_pred             ---HhccCCEEEECCCCcCcCC--HHHcCCCcEEEEccCCc
Confidence               2334889999998775222  23468899999999763

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.23  E-value=0.002  Score=55.38  Aligned_cols=75  Identities=13%  Similarity=0.240  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCh---hhHHHHHHHcCCcEE--ecCCCHHHHHHHc-------CC
Q 021300          183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERLGADSF--LVSRDQDEMQAAM-------GT  247 (314)
Q Consensus       183 ~g~~vlI~Ga---g~vG~~a~~~a~~~g~~vi~v~~~~---~~~~~~~~~~ga~~~--v~~~~~~~~~~~~-------~~  247 (314)
                      .+.++||.|+   |++|.+.++.+...|++|+++.+++   +..+++.++.+...+  .|-.+++.+.++.       ++
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999885   6999999999999999999999876   334444444443222  3555554433322       36


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus        88 iD~lv~~Ag~   97 (265)
T 1qsg_A           88 FDGFVHSIGF   97 (265)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8999999984

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.23  E-value=0.0027  Score=54.81  Aligned_cols=75  Identities=17%  Similarity=0.153  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-ChhhHHHHHHHc----CCcEE---ecCCCH----HHHHHH-----
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERL----GADSF---LVSRDQ----DEMQAA-----  244 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~-~~~~~~~~~~~~----ga~~~---v~~~~~----~~~~~~-----  244 (314)
                      .|.++||.|+ |++|.+.++.+...|++|+++.+ ++++.+++.+++    +.+..   .|-.++    +.+.++     
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            4678999887 99999999999999999999999 877666555444    43321   243444    433322     


Q ss_pred             --cCCccEEEEccCC
Q 021300          245 --MGTMDGIIDTVSA  257 (314)
Q Consensus       245 --~~~~d~v~d~~g~  257 (314)
                        .+++|++|+++|.
T Consensus        90 ~~~g~id~lv~nAg~  104 (276)
T 1mxh_A           90 RAFGRCDVLVNNASA  104 (276)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCC
Confidence              2479999999983

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=97.23  E-value=0.00087  Score=55.60  Aligned_cols=99  Identities=30%  Similarity=0.318  Sum_probs=68.6

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHH---cCCc-EEecCCCHHHHHHHcCCccEEEE
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIER---LGAD-SFLVSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~~---~ga~-~~v~~~~~~~~~~~~~~~d~v~d  253 (314)
                      .++++++||.+|+|. |..+..+++..+  .+++.++.++...+.+.+.   .+.+ .-+...+........+.||+|+.
T Consensus        74 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~  152 (215)
T 2yxe_A           74 DLKPGMKVLEIGTGC-GYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYT  152 (215)
T ss_dssp             TCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEE
T ss_pred             CCCCCCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEE
Confidence            468999999999984 888889998876  7999999998766555433   2332 11112221110011357999998


Q ss_pred             ccCCcccHHHHHHhhccCCEEEEEcC
Q 021300          254 TVSAVHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       254 ~~g~~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      +..-......+.+.|+++|+++..-.
T Consensus       153 ~~~~~~~~~~~~~~L~pgG~lv~~~~  178 (215)
T 2yxe_A          153 TAAGPKIPEPLIRQLKDGGKLLMPVG  178 (215)
T ss_dssp             SSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             CCchHHHHHHHHHHcCCCcEEEEEEC
Confidence            87766666889999999999888744

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=97.22  E-value=0.0027  Score=59.56  Aligned_cols=92  Identities=17%  Similarity=0.207  Sum_probs=72.2

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      .-.|.+|.|+|.|.+|..+++.++.+|++|+++++++.+..+. ...|... .      .+.++....|+|+-+++....
T Consensus       274 ~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a-~~~G~~~-~------~l~ell~~aDiVi~~~~t~~l  345 (494)
T 3d64_A          274 MIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQA-AMEGYRV-V------TMEYAADKADIFVTATGNYHV  345 (494)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHH-HTTTCEE-C------CHHHHTTTCSEEEECSSSSCS
T ss_pred             ccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHH-HHcCCEe-C------CHHHHHhcCCEEEECCCcccc
Confidence            3678999999999999999999999999999999988654333 2346532 1      244566789999999875543


Q ss_pred             H-HHHHHhhccCCEEEEEcCC
Q 021300          261 L-MPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       261 ~-~~~~~~l~~~G~~v~~G~~  280 (314)
                      + ...++.|+++..++.+|..
T Consensus       346 I~~~~l~~MK~gAilINvgrg  366 (494)
T 3d64_A          346 INHDHMKAMRHNAIVCNIGHF  366 (494)
T ss_dssp             BCHHHHHHCCTTEEEEECSSS
T ss_pred             cCHHHHhhCCCCcEEEEcCCC
Confidence            3 5688999999999999884

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.22  E-value=0.0036  Score=54.33  Aligned_cols=75  Identities=24%  Similarity=0.338  Sum_probs=54.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CC---cEE---ecCCCHHHHHHH-------c
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA---DSF---LVSRDQDEMQAA-------M  245 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga---~~~---v~~~~~~~~~~~-------~  245 (314)
                      .|.++||.|+ |++|.+.++.+...|++|+++++++++.+++.+++   +.   ...   .|-.+++.+.++       .
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH   89 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            5788999987 99999999999999999999999988766665544   22   211   244454433322       3


Q ss_pred             CCccEEEEccCC
Q 021300          246 GTMDGIIDTVSA  257 (314)
Q Consensus       246 ~~~d~v~d~~g~  257 (314)
                      +.+|++++++|.
T Consensus        90 g~id~lv~nAg~  101 (281)
T 3svt_A           90 GRLHGVVHCAGG  101 (281)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999985

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.22  E-value=0.0023  Score=55.31  Aligned_cols=99  Identities=14%  Similarity=0.224  Sum_probs=65.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-ChhhHHHHHH---HcCCcEE---ecCCCHHHHHHH-------cC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIE---RLGADSF---LVSRDQDEMQAA-------MG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~-~~~~~~~~~~---~~ga~~~---v~~~~~~~~~~~-------~~  246 (314)
                      ..|.++||.|+ +++|.+.++.+...|++|+++.+ ..+..+++.+   ..+.+..   .|-.+++.+.++       .+
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            45788999987 99999999988888999988754 4444434333   3344332   244555433332       34


Q ss_pred             CccEEEEccCCcc-------------------------cHHHHHHhhccCCEEEEEcCC
Q 021300          247 TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       247 ~~d~v~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      ++|++|+++|...                         .+..+++.|+++|+++.+++.
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~  163 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTS  163 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeCh
Confidence            7999999998420                         133455666778999999875

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.22  E-value=0.0036  Score=53.76  Aligned_cols=76  Identities=20%  Similarity=0.298  Sum_probs=55.0

Q ss_pred             CCCCEEEEEcC-C-hHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---C-CcE---EecCCCHHHHHHH-------c
Q 021300          182 KPGMHVGVVGL-G-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---G-ADS---FLVSRDQDEMQAA-------M  245 (314)
Q Consensus       182 ~~g~~vlI~Ga-g-~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---g-a~~---~v~~~~~~~~~~~-------~  245 (314)
                      -.|.++||.|+ | ++|...++.+...|++|+++.++.++..++.+++   + .+.   ..|-.+++.+.++       .
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            35788999997 6 7999999999999999999999988776666554   2 222   1244555433322       2


Q ss_pred             CCccEEEEccCC
Q 021300          246 GTMDGIIDTVSA  257 (314)
Q Consensus       246 ~~~d~v~d~~g~  257 (314)
                      +.+|++|+++|.
T Consensus       100 g~id~li~~Ag~  111 (266)
T 3o38_A          100 GRLDVLVNNAGL  111 (266)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCcEEEECCCc
Confidence            479999999983

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.21  E-value=0.0025  Score=54.54  Aligned_cols=75  Identities=12%  Similarity=0.143  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC------------CcE-EecCCCHHHHHHH----
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG------------ADS-FLVSRDQDEMQAA----  244 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g------------a~~-~v~~~~~~~~~~~----  244 (314)
                      .+.++||.|+ |.+|...++.+...|++|+++.+++++.+++.+++.            ... ..|-.+++.+.++    
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV   85 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence            4678999997 999999999999899999999999887766655442            111 1244455433332    


Q ss_pred             ---cCCc-cEEEEccCC
Q 021300          245 ---MGTM-DGIIDTVSA  257 (314)
Q Consensus       245 ---~~~~-d~v~d~~g~  257 (314)
                         .+.+ |++|+++|.
T Consensus        86 ~~~~g~i~d~vi~~Ag~  102 (264)
T 2pd6_A           86 QACFSRPPSVVVSCAGI  102 (264)
T ss_dssp             HHHHSSCCSEEEECCCC
T ss_pred             HHHhCCCCeEEEECCCc
Confidence               2356 999999874

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.21  E-value=0.0059  Score=54.86  Aligned_cols=101  Identities=23%  Similarity=0.388  Sum_probs=67.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhh-------H---HHHHHHcCCcEE---ecCCCHHHHHHH---
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-------K---SEAIERLGADSF---LVSRDQDEMQAA---  244 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~-------~---~~~~~~~ga~~~---v~~~~~~~~~~~---  244 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|+++.++.++       .   .+..++.+....   .|-.+++.+.++   
T Consensus        43 l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            35789999997 999999999999999999999988753       2   222334454322   245555433332   


Q ss_pred             ----cCCccEEEEccCCcc-------------------------cHHHHHHhhcc--CCEEEEEcCCCC
Q 021300          245 ----MGTMDGIIDTVSAVH-------------------------PLMPLIGLLKS--QGKLVLVGAPEK  282 (314)
Q Consensus       245 ----~~~~d~v~d~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~G~~~~  282 (314)
                          .+++|++|+++|...                         ..+.++..|+.  .|+|+.+++...
T Consensus       123 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~  191 (346)
T 3kvo_A          123 AIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLN  191 (346)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCC
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHH
Confidence                248999999998421                         12334455543  489999987643

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.21  E-value=0.0014  Score=61.51  Aligned_cols=95  Identities=15%  Similarity=0.184  Sum_probs=65.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCCcE-EecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga~~-~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      .+.+|+|+|+|.+|..++..+... +.+|+++.++.++.+++++..+... .++..+.+.+.+...++|+|+++++....
T Consensus        22 ~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~~~  101 (467)
T 2axq_A           22 MGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYTFH  101 (467)
T ss_dssp             -CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGGGH
T ss_pred             CCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchhhh
Confidence            457899999999999999888877 6799999999888777765544433 23555555555555689999999986432


Q ss_pred             HHHHHHhhccCCEEEEE
Q 021300          261 LMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       261 ~~~~~~~l~~~G~~v~~  277 (314)
                      ......+++.+-.++..
T Consensus       102 ~~v~~a~l~~g~~vvd~  118 (467)
T 2axq_A          102 PNVVKSAIRTKTDVVTS  118 (467)
T ss_dssp             HHHHHHHHHHTCEEEEC
T ss_pred             HHHHHHHHhcCCEEEEe
Confidence            22233445555555554

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.21  E-value=0.0018  Score=55.38  Aligned_cols=100  Identities=17%  Similarity=0.203  Sum_probs=68.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcCCcEEe---cCCCHHHHHHHc--CCccEEEEcc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADSFL---VSRDQDEMQAAM--GTMDGIIDTV  255 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~~~~~ga~~~v---~~~~~~~~~~~~--~~~d~v~d~~  255 (314)
                      .|+++||.|+ +++|.+.++.+...|++|++..++.+ +..+..++.|.+...   |-.+++.+++..  +++|+++++.
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNA   87 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNA   87 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECC
Confidence            5888999887 99999999999999999999988753 334445666754332   333343333322  3699999999


Q ss_pred             CCc-------------------------ccHHHHHHhhc---cCCEEEEEcCCCC
Q 021300          256 SAV-------------------------HPLMPLIGLLK---SQGKLVLVGAPEK  282 (314)
Q Consensus       256 g~~-------------------------~~~~~~~~~l~---~~G~~v~~G~~~~  282 (314)
                      |..                         ...+.+++.|.   ++|+||.+++..+
T Consensus        88 Gi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~  142 (247)
T 4hp8_A           88 GIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLS  142 (247)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred             CCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhh
Confidence            832                         12334555552   3699999987543

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.19  E-value=0.0046  Score=53.72  Aligned_cols=76  Identities=21%  Similarity=0.264  Sum_probs=51.7

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-ChhhHHHHHHH---cCCcEE---ecCCCHHHHH-------HHcC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIER---LGADSF---LVSRDQDEMQ-------AAMG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~-~~~~~~~~~~~---~ga~~~---v~~~~~~~~~-------~~~~  246 (314)
                      ..+.++||.|+ |++|.+.++.+...|++|+++++ ++++.+++.++   .+.+..   .|-.+++.+.       +..+
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            45788999997 99999999999999999999985 55554444433   343322   2444443222       2235


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      ++|++|+++|.
T Consensus       107 ~iD~lvnnAg~  117 (280)
T 4da9_A          107 RIDCLVNNAGI  117 (280)
T ss_dssp             CCCEEEEECC-
T ss_pred             CCCEEEECCCc
Confidence            89999999985

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.19  E-value=0.0015  Score=54.29  Aligned_cols=91  Identities=22%  Similarity=0.343  Sum_probs=63.8

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHHcCCccEEEEccCCc-----
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAAMGTMDGIIDTVSAV-----  258 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v-~~~~~~~~~~~~~~~d~v~d~~g~~-----  258 (314)
                      +|||.|+ |.+|...++.+...|.+|+++++++++..++. ..+...+. |..+++.  +..+++|+||.++|..     
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~   78 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-GATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWGSGR   78 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-CTTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTTSSC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-CCCceEEecccccccH--hhcccCCEEEECCccCCCcch
Confidence            6899998 99999999999999999999999987665442 22343322 3333333  5557899999999862     


Q ss_pred             -----ccHHHHHHhhc-cCCEEEEEcC
Q 021300          259 -----HPLMPLIGLLK-SQGKLVLVGA  279 (314)
Q Consensus       259 -----~~~~~~~~~l~-~~G~~v~~G~  279 (314)
                           .....+++.++ .+++++.+++
T Consensus        79 ~~~n~~~~~~l~~a~~~~~~~~v~~SS  105 (224)
T 3h2s_A           79 GYLHLDFATHLVSLLRNSDTLAVFILG  105 (224)
T ss_dssp             THHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred             hhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence                 12344566664 3578998864

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=97.18  E-value=0.0039  Score=56.08  Aligned_cols=56  Identities=27%  Similarity=0.401  Sum_probs=44.0

Q ss_pred             hHhcCC-CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE
Q 021300          175 LRFYGL-DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS  231 (314)
Q Consensus       175 l~~~~~-~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~  231 (314)
                      ++..+. --.|.+|.|.|.|.+|+.+++.++.+|++|++.+.++.+ .++.++++++.
T Consensus       165 ~~~~G~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~-~~~a~~~ga~~  221 (355)
T 1c1d_A          165 VAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTER-VAHAVALGHTA  221 (355)
T ss_dssp             HHHTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHTTCEE
T ss_pred             HHhcCCCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHhcCCEE
Confidence            344442 358999999999999999999999999999977776654 56667787654

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.18  E-value=0.0065  Score=51.40  Aligned_cols=76  Identities=21%  Similarity=0.381  Sum_probs=54.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---C-C-cEE--ecC--CCHHHHHH-------H
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---G-A-DSF--LVS--RDQDEMQA-------A  244 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---g-a-~~~--v~~--~~~~~~~~-------~  244 (314)
                      -.|.++||.|+ |++|...++.+...|++|+++.+++++.+++.+++   + . ..+  ++-  .+.+.+.+       .
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            45788999987 99999999999999999999999988776665443   2 1 122  222  34433322       2


Q ss_pred             cCCccEEEEccCC
Q 021300          245 MGTMDGIIDTVSA  257 (314)
Q Consensus       245 ~~~~d~v~d~~g~  257 (314)
                      .+.+|++|+++|.
T Consensus        92 ~g~id~lv~nAg~  104 (247)
T 3i1j_A           92 FGRLDGLLHNASI  104 (247)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence            3479999999884

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=97.18  E-value=0.0011  Score=54.65  Aligned_cols=98  Identities=22%  Similarity=0.127  Sum_probs=68.4

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc-EEecCCCHHHHHHHcCCccEEEEcc
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD-SFLVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~-~~v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      .++++++||-+|+|. |..+..+++. +.+++.++.+++..+.+.+.   .+.+ .-+...+........+.||+|+...
T Consensus        74 ~~~~~~~vLdiG~G~-G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~  151 (210)
T 3lbf_A           74 ELTPQSRVLEIGTGS-GYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTA  151 (210)
T ss_dssp             TCCTTCEEEEECCTT-SHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESS
T ss_pred             CCCCCCEEEEEcCCC-CHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEcc
Confidence            368999999999974 8888888887 78999999998876555443   3432 1122222111111235799999877


Q ss_pred             CCcccHHHHHHhhccCCEEEEEcC
Q 021300          256 SAVHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       256 g~~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      .-......+.+.|+++|+++..-.
T Consensus       152 ~~~~~~~~~~~~L~pgG~lv~~~~  175 (210)
T 3lbf_A          152 APPEIPTALMTQLDEGGILVLPVG  175 (210)
T ss_dssp             BCSSCCTHHHHTEEEEEEEEEEEC
T ss_pred             chhhhhHHHHHhcccCcEEEEEEc
Confidence            666656789999999999888744

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.17  E-value=0.0062  Score=53.40  Aligned_cols=76  Identities=25%  Similarity=0.365  Sum_probs=52.7

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC------------hhhHHHHHH---HcCCcEE---ecCCCHHHHH
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS------------PSKKSEAIE---RLGADSF---LVSRDQDEMQ  242 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~------------~~~~~~~~~---~~ga~~~---v~~~~~~~~~  242 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|++++++            .++..++.+   ..+.+..   .|-.+++.+.
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            35788999987 999999999999999999999876            444444333   3454332   2445554333


Q ss_pred             HH-------cCCccEEEEccCC
Q 021300          243 AA-------MGTMDGIIDTVSA  257 (314)
Q Consensus       243 ~~-------~~~~d~v~d~~g~  257 (314)
                      ++       .+.+|++|+++|.
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg~  127 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAAL  127 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHhCCCCEEEECCCC
Confidence            32       2479999999873

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.17  E-value=0.0025  Score=55.58  Aligned_cols=75  Identities=12%  Similarity=0.140  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh-hhHHHHHHH----cCCcEE---ecCCC----HHHHHHH-----
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAIER----LGADSF---LVSRD----QDEMQAA-----  244 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~-~~~~~~~~~----~ga~~~---v~~~~----~~~~~~~-----  244 (314)
                      .|.++||.|+ |++|.+.++.+...|++|+++.+++ ++.+++.++    .+....   .|-.+    ++.+.++     
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~  101 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF  101 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence            4678999887 9999999999988999999999987 655555443    343321   24455    4433322     


Q ss_pred             --cCCccEEEEccCC
Q 021300          245 --MGTMDGIIDTVSA  257 (314)
Q Consensus       245 --~~~~d~v~d~~g~  257 (314)
                        .+++|++|+++|.
T Consensus       102 ~~~g~iD~lvnnAG~  116 (288)
T 2x9g_A          102 RAFGRCDVLVNNASA  116 (288)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCC
Confidence              2479999999884

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.17  E-value=0.0016  Score=56.82  Aligned_cols=76  Identities=18%  Similarity=0.199  Sum_probs=59.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHHc---CCccEEEEc
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAAM---GTMDGIIDT  254 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~~---~~~d~v~d~  254 (314)
                      -.|.++||.|+ |++|.+.++.+...|++|++++++.++.+++.++++.+..   .|-.+++.+.++.   +.+|++|++
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~n   93 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINN   93 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEEC
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            46789999987 9999999999999999999999999888888777764322   2445555555543   378999999


Q ss_pred             cCC
Q 021300          255 VSA  257 (314)
Q Consensus       255 ~g~  257 (314)
                      +|.
T Consensus        94 Ag~   96 (291)
T 3rd5_A           94 AGI   96 (291)
T ss_dssp             CCC
T ss_pred             CcC
Confidence            883

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.17  E-value=0.0013  Score=57.41  Aligned_cols=102  Identities=17%  Similarity=0.023  Sum_probs=69.2

Q ss_pred             hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCC---cEEecCCCHHHHHHHcCCcc
Q 021300          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA---DSFLVSRDQDEMQAAMGTMD  249 (314)
Q Consensus       174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga---~~~v~~~~~~~~~~~~~~~d  249 (314)
                      +|+..+.--.+.+++|+|+|++|.+++..+...|+ +++++.|+.++.++++++++.   -.+....      ++...+|
T Consensus       116 ~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~------~l~~~aD  189 (281)
T 3o8q_A          116 DLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFE------QLKQSYD  189 (281)
T ss_dssp             HHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG------GCCSCEE
T ss_pred             HHHHhCCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHH------HhcCCCC
Confidence            34444322468899999999999999999998996 899999999988888887763   1222221      1226799


Q ss_pred             EEEEccCCcccHH---HHHHhhccCCEEEEEcCCC
Q 021300          250 GIIDTVSAVHPLM---PLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       250 ~v~d~~g~~~~~~---~~~~~l~~~G~~v~~G~~~  281 (314)
                      +||++++....-.   .-...++++..++++...+
T Consensus       190 iIInaTp~gm~~~~~~l~~~~l~~~~~V~DlvY~P  224 (281)
T 3o8q_A          190 VIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGK  224 (281)
T ss_dssp             EEEECSCCCC----CSCCGGGEEEEEEEEESCCCS
T ss_pred             EEEEcCcCCCCCCCCCCCHHHhCcCCEEEEecCCC
Confidence            9999987542100   0124566666777776543

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.17  E-value=0.0029  Score=54.73  Aligned_cols=75  Identities=15%  Similarity=0.188  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCChh---hHHHHHHHcC-CcE-EecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLG-ADS-FLVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga---g~vG~~a~~~a~~~g~~vi~v~~~~~---~~~~~~~~~g-a~~-~v~~~~~~~~~~~-------~~~  247 (314)
                      .|.++||.|+   |++|...++.+...|++|+++.++++   ..+++.++.+ ... ..|-.+++.+.++       .++
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   84 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999985   69999999999999999999998875   3444544445 222 2355555433332       247


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus        85 id~lv~nAg~   94 (275)
T 2pd4_A           85 LDFIVHSVAF   94 (275)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999874

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=97.17  E-value=0.0024  Score=53.95  Aligned_cols=74  Identities=15%  Similarity=0.216  Sum_probs=51.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCChhhHHHHHHHc---CCc--E--EecCCCHHHHHHH-------cCC
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIERL---GAD--S--FLVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v-~~~~~~~~~~~~~~---ga~--~--~v~~~~~~~~~~~-------~~~  247 (314)
                      +.++||.|+ |.+|...++.+...|++|+++ .+++++.+++.+++   +..  .  ..|-.+++.+.+.       .++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            357899887 999999999999899999988 77776655554332   432  1  1244555443332       357


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|.++|.
T Consensus        81 ~d~li~~Ag~   90 (245)
T 2ph3_A           81 LDTLVNNAGI   90 (245)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.16  E-value=0.0046  Score=52.45  Aligned_cols=74  Identities=16%  Similarity=0.199  Sum_probs=54.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-CcE-EecCCCHHHHHHH---cCCccEEEEccC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADS-FLVSRDQDEMQAA---MGTMDGIIDTVS  256 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-a~~-~v~~~~~~~~~~~---~~~~d~v~d~~g  256 (314)
                      .|.++||.|+ |++|...++.+...|++|+++.+++++.+++. ++. ... ..|-.+++.+.+.   .+++|++|+++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag   83 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence            4678999987 99999999999999999999999887665554 443 221 2355555555443   357999999988


Q ss_pred             C
Q 021300          257 A  257 (314)
Q Consensus       257 ~  257 (314)
                      .
T Consensus        84 ~   84 (246)
T 2ag5_A           84 F   84 (246)
T ss_dssp             C
T ss_pred             c
Confidence            4

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.16  E-value=0.0022  Score=54.42  Aligned_cols=73  Identities=15%  Similarity=0.060  Sum_probs=53.2

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-e--CChhhHHHHHHHc-CCcEEecCCCH-HHHHHH---cCCccEEEEc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-S--TSPSKKSEAIERL-GADSFLVSRDQ-DEMQAA---MGTMDGIIDT  254 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v-~--~~~~~~~~~~~~~-ga~~~v~~~~~-~~~~~~---~~~~d~v~d~  254 (314)
                      |.++||.|+ |++|.+.++.+...|++|+++ .  +++++.+++.+++ +.+ +.+..+. ..+.+.   .+.+|++|++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~g~iD~lv~~   79 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTI-ALAEQKPERLVDATLQHGEAIDTIVSN   79 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEE-ECCCCCGGGHHHHHGGGSSCEEEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCc-ccCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            467899887 999999999999999999998 6  8888777777766 433 3344443 233333   3479999999


Q ss_pred             cCC
Q 021300          255 VSA  257 (314)
Q Consensus       255 ~g~  257 (314)
                      +|.
T Consensus        80 Ag~   82 (244)
T 1zmo_A           80 DYI   82 (244)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            873

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.16  E-value=0.0026  Score=54.86  Aligned_cols=75  Identities=16%  Similarity=0.325  Sum_probs=53.4

Q ss_pred             CCCEEEEEc---CChHHHHHHHHHHHCCCeEEEEeCChhh-HHHHHHHcCCc--E-EecCCCHHHHHHH-------cC--
Q 021300          183 PGMHVGVVG---LGGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGAD--S-FLVSRDQDEMQAA-------MG--  246 (314)
Q Consensus       183 ~g~~vlI~G---ag~vG~~a~~~a~~~g~~vi~v~~~~~~-~~~~~~~~ga~--~-~v~~~~~~~~~~~-------~~--  246 (314)
                      .|.++||.|   +|++|.+.++.+...|++|+++.+++++ .+++.++++.+  . ..|-.+++.+.++       .+  
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            467899988   4899999999999999999999988765 35565555532  2 2355555433322       24  


Q ss_pred             -CccEEEEccCC
Q 021300          247 -TMDGIIDTVSA  257 (314)
Q Consensus       247 -~~d~v~d~~g~  257 (314)
                       ++|++|+++|.
T Consensus        86 ~~iD~lv~nAg~   97 (269)
T 2h7i_A           86 NKLDGVVHSIGF   97 (269)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CCceEEEECCcc
Confidence             79999999874

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.15  E-value=0.0022  Score=56.02  Aligned_cols=100  Identities=14%  Similarity=0.206  Sum_probs=66.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCC---eEEEEeCChhhHHHHHHHc-----CCcEE---ecCCCHHHHHHH------
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGV---KVTVISTSPSKKSEAIERL-----GADSF---LVSRDQDEMQAA------  244 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~---~vi~v~~~~~~~~~~~~~~-----ga~~~---v~~~~~~~~~~~------  244 (314)
                      .|.++||.|+ +++|.+.++.+...|+   +|+++.++.++.+++.+++     +.+..   .|-.+++.+.++      
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4678999997 9999998887776676   9999999988777766554     33222   244444433332      


Q ss_pred             -cCCccEEEEccCCcc--------------------------cHHHHHHhh--ccCCEEEEEcCCCC
Q 021300          245 -MGTMDGIIDTVSAVH--------------------------PLMPLIGLL--KSQGKLVLVGAPEK  282 (314)
Q Consensus       245 -~~~~d~v~d~~g~~~--------------------------~~~~~~~~l--~~~G~~v~~G~~~~  282 (314)
                       .+.+|++|+++|...                          ..+.+++.|  +..|++|.+++..+
T Consensus       112 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~  178 (287)
T 3rku_A          112 EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAG  178 (287)
T ss_dssp             GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG
T ss_pred             hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhh
Confidence             136999999998321                          122334444  34699999987543

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.15  E-value=0.0029  Score=54.29  Aligned_cols=75  Identities=20%  Similarity=0.329  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCChh---hHHHHHHHcCCcEE--ecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGADSF--LVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga---g~vG~~a~~~a~~~g~~vi~v~~~~~---~~~~~~~~~ga~~~--v~~~~~~~~~~~-------~~~  247 (314)
                      .+.++||.|+   |++|...++.+...|++|+++.++++   ..+++.++.+....  .|-.+++.+.++       .++
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999985   69999999988888999999998875   34444444453222  244555443332       247


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus        87 iD~lv~~Ag~   96 (261)
T 2wyu_A           87 LDYLVHAIAF   96 (261)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.14  E-value=0.0063  Score=52.60  Aligned_cols=100  Identities=19%  Similarity=0.328  Sum_probs=66.0

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC------------hhhHHHHHH---HcCCcEE---ecCCCHHHHH
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS------------PSKKSEAIE---RLGADSF---LVSRDQDEMQ  242 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~------------~~~~~~~~~---~~ga~~~---v~~~~~~~~~  242 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|+++.++            .++.+++.+   ..+.+..   .|-.+++.+.
T Consensus        11 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            35789999987 999999999999999999999876            444433332   3344332   2445554333


Q ss_pred             HH-------cCCccEEEEccCCcc---------------------cHHHHHHhhcc---CCEEEEEcCCC
Q 021300          243 AA-------MGTMDGIIDTVSAVH---------------------PLMPLIGLLKS---QGKLVLVGAPE  281 (314)
Q Consensus       243 ~~-------~~~~d~v~d~~g~~~---------------------~~~~~~~~l~~---~G~~v~~G~~~  281 (314)
                      ++       .+.+|++|+++|...                     .++.+++.|.+   +|+++.+++..
T Consensus        91 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~  160 (278)
T 3sx2_A           91 AALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSA  160 (278)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGG
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHH
Confidence            32       247999999998431                     12334444532   68999998754

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.13  E-value=0.0044  Score=56.06  Aligned_cols=93  Identities=15%  Similarity=0.189  Sum_probs=69.9

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHHH
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  264 (314)
                      .+|+|+|+|.+|..+++.+.. ...+.+.+++.++.+.+ ++......+|..+.+.+.++..++|+|+++++.......+
T Consensus        17 mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~-~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~~~~v~   94 (365)
T 3abi_A           17 MKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKV-KEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGFKSI   94 (365)
T ss_dssp             CEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHH-TTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGGHHHHH
T ss_pred             cEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH-hccCCcEEEecCCHHHHHHHHhCCCEEEEecCCcccchHH
Confidence            579999999999998887754 46888888888776555 3333233467778888888888999999999866545566


Q ss_pred             HHhhccCCEEEEEcC
Q 021300          265 IGLLKSQGKLVLVGA  279 (314)
Q Consensus       265 ~~~l~~~G~~v~~G~  279 (314)
                      -.+++.+--++++..
T Consensus        95 ~~~~~~g~~yvD~s~  109 (365)
T 3abi_A           95 KAAIKSKVDMVDVSF  109 (365)
T ss_dssp             HHHHHHTCEEEECCC
T ss_pred             HHHHhcCcceEeeec
Confidence            667777777888754

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=97.13  E-value=0.0015  Score=57.10  Aligned_cols=97  Identities=13%  Similarity=0.108  Sum_probs=72.8

Q ss_pred             cccchhhhhhhhhhHhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 021300          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (314)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag-~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~  240 (314)
                      ..+||+.......+++...--.|.+++|+|+| .+|.-+++++...|++|++..+...                     .
T Consensus       143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~---------------------~  201 (301)
T 1a4i_A          143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA---------------------H  201 (301)
T ss_dssp             CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------S
T ss_pred             CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcc---------------------c
Confidence            35677777777777776644689999999996 6899999999999999988754322                     2


Q ss_pred             HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       241 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      +.+....+|+||-++|.+..+  --+.++++..++++|.+.
T Consensus       202 L~~~~~~ADIVI~Avg~p~~I--~~~~vk~GavVIDVgi~~  240 (301)
T 1a4i_A          202 LDEEVNKGDILVVATGQPEMV--KGEWIKPGAIVIDCGINY  240 (301)
T ss_dssp             HHHHHTTCSEEEECCCCTTCB--CGGGSCTTCEEEECCCBC
T ss_pred             HHHHhccCCEEEECCCCcccC--CHHHcCCCcEEEEccCCC
Confidence            234456789999999987532  224578999999999863

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=97.12  E-value=0.0028  Score=59.28  Aligned_cols=92  Identities=17%  Similarity=0.206  Sum_probs=72.2

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      .-.|.+|.|+|.|.+|..+++.++.+|++|+++.+++.+..+. ...|+.. .      .+.++....|+|+-+.+....
T Consensus       254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a-~~~g~~~-~------~l~ell~~aDiVi~~~~t~~l  325 (479)
T 1v8b_A          254 LISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQA-VMEGFNV-V------TLDEIVDKGDFFITCTGNVDV  325 (479)
T ss_dssp             CCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHH-HTTTCEE-C------CHHHHTTTCSEEEECCSSSSS
T ss_pred             ccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHH-HHcCCEe-c------CHHHHHhcCCEEEECCChhhh
Confidence            3679999999999999999999999999999999988654333 2456532 1      244566789999999876554


Q ss_pred             H-HHHHHhhccCCEEEEEcCC
Q 021300          261 L-MPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       261 ~-~~~~~~l~~~G~~v~~G~~  280 (314)
                      + ...+..|+++..++.+|..
T Consensus       326 I~~~~l~~MK~gailiNvgrg  346 (479)
T 1v8b_A          326 IKLEHLLKMKNNAVVGNIGHF  346 (479)
T ss_dssp             BCHHHHTTCCTTCEEEECSST
T ss_pred             cCHHHHhhcCCCcEEEEeCCC
Confidence            4 4678899999999999874

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.12  E-value=0.0058  Score=52.73  Aligned_cols=76  Identities=22%  Similarity=0.310  Sum_probs=52.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-ChhhHHHHHH---HcCCcEE---ecCCCHHHHHHH-------cC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIE---RLGADSF---LVSRDQDEMQAA-------MG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~-~~~~~~~~~~---~~ga~~~---v~~~~~~~~~~~-------~~  246 (314)
                      -.|.++||.|+ |++|.+.++.+...|++|+++.+ +.+..+++.+   +.+....   .|-.+++.+.++       .+
T Consensus        26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g  105 (269)
T 4dmm_A           26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG  105 (269)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            35788999887 99999999999999999999888 4444444333   3344332   244554433322       34


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      ++|++|+++|.
T Consensus       106 ~id~lv~nAg~  116 (269)
T 4dmm_A          106 RLDVLVNNAGI  116 (269)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.11  E-value=0.0063  Score=51.79  Aligned_cols=99  Identities=12%  Similarity=0.121  Sum_probs=63.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCe-EEEEeCCh--hhHHHHHHHcC-CcE---EecCCCH-HHHHHH-------cC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVK-VTVISTSP--SKKSEAIERLG-ADS---FLVSRDQ-DEMQAA-------MG  246 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~-vi~v~~~~--~~~~~~~~~~g-a~~---~v~~~~~-~~~~~~-------~~  246 (314)
                      .|.++||.|+ |++|...++.+...|++ |+++.+++  +..+++.+..+ ...   ..|-.++ +.+.++       .+
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            4678999987 99999999999999996 88888875  33445544432 221   1243433 332222       24


Q ss_pred             CccEEEEccCCcc-----------------cHHHHHHhhcc-----CCEEEEEcCCC
Q 021300          247 TMDGIIDTVSAVH-----------------PLMPLIGLLKS-----QGKLVLVGAPE  281 (314)
Q Consensus       247 ~~d~v~d~~g~~~-----------------~~~~~~~~l~~-----~G~~v~~G~~~  281 (314)
                      ++|++|+++|...                 .++.+++.+.+     +|+++.+++..
T Consensus        84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~  140 (254)
T 1sby_A           84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVT  140 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred             CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchh
Confidence            7999999998321                 12334444432     58999998754

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=97.11  E-value=0.005  Score=52.04  Aligned_cols=75  Identities=17%  Similarity=0.291  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCChhhHHHHHHH---cCCcEE---ecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v-~~~~~~~~~~~~~---~ga~~~---v~~~~~~~~~~~-------~~~  247 (314)
                      .+.++||.|+ |.+|...++.+...|++|+++ .+++++.+++.++   .+.+..   .|-.+++.+.++       .++
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4678999987 999999999999999999988 4555544444333   343322   244555443332       247


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus        84 ~d~vi~~Ag~   93 (247)
T 2hq1_A           84 IDILVNNAGI   93 (247)
T ss_dssp             CCEEEECC--
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.10  E-value=0.0022  Score=55.21  Aligned_cols=98  Identities=16%  Similarity=0.224  Sum_probs=65.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh---hHHHHHHHc---CCcEE---ecCCCHHHHHHH-------c
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERL---GADSF---LVSRDQDEMQAA-------M  245 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~---~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~  245 (314)
                      .|.++||.|+ +++|.+.++.+...|++|+++.+...   +.+++.+++   +.+..   .|-.+++.+.++       .
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5788999987 99999999999999999999876533   333443333   43322   244555433332       2


Q ss_pred             CCccEEEEccCCc-------------------------ccHHHHHHhhccCCEEEEEcCC
Q 021300          246 GTMDGIIDTVSAV-------------------------HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       246 ~~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      +++|++|+++|..                         ...+.+++.|+++|+++.+++.
T Consensus        90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~  149 (262)
T 3ksu_A           90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATS  149 (262)
T ss_dssp             CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEech
Confidence            4799999999832                         0123344455678999999874

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.10  E-value=0.0054  Score=53.57  Aligned_cols=44  Identities=18%  Similarity=0.061  Sum_probs=36.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEe-CChhhHHHHHHH
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAIER  226 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~-~~~~~~~~~~~~  226 (314)
                      .+.++||.|+ +++|.+.++.+...|++|+++. ++.++.+++.++
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~   53 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSAT   53 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH
Confidence            4678999887 9999999999999999999999 888776655543

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=97.10  E-value=0.0026  Score=55.60  Aligned_cols=97  Identities=20%  Similarity=0.218  Sum_probs=72.8

Q ss_pred             ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (314)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~  241 (314)
                      .+||....+...+++...--.|.+++|+|. +.+|..+++++...|++|++..+......                   +
T Consensus       144 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~-------------------l  204 (300)
T 4a26_A          144 FTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED-------------------M  204 (300)
T ss_dssp             CCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH-------------------H
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-------------------h
Confidence            467777777778887775568999999998 55899999999999999988776433221                   1


Q ss_pred             HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCC
Q 021300          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      .+....+|+||.++|.+..+.  -+.++++..++.+|..
T Consensus       205 ~~~~~~ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~  241 (300)
T 4a26_A          205 IDYLRTADIVIAAMGQPGYVK--GEWIKEGAAVVDVGTT  241 (300)
T ss_dssp             HHHHHTCSEEEECSCCTTCBC--GGGSCTTCEEEECCCE
T ss_pred             hhhhccCCEEEECCCCCCCCc--HHhcCCCcEEEEEecc
Confidence            134456899999999765332  2457899999999975

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.09  E-value=0.0027  Score=52.14  Aligned_cols=99  Identities=14%  Similarity=0.155  Sum_probs=67.6

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHH---cCCc--EEecCCCHHHHHHHcCCccEEEE
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIER---LGAD--SFLVSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~---~ga~--~~v~~~~~~~~~~~~~~~d~v~d  253 (314)
                      .++++++||-+|+|. |..+..+++.. ..+++.++.+++..+.+.+.   .+.+  .++..+..+... ..+.||+|+.
T Consensus        37 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~i~~  114 (204)
T 3e05_A           37 RLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD-DLPDPDRVFI  114 (204)
T ss_dssp             TCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT-TSCCCSEEEE
T ss_pred             CCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh-cCCCCCEEEE
Confidence            378999999999975 88888999886 36999999998876555433   3432  222222111111 1246999998


Q ss_pred             ccCC---cccHHHHHHhhccCCEEEEEcCC
Q 021300          254 TVSA---VHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       254 ~~g~---~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      ....   ...+..+.+.|+++|+++.....
T Consensus       115 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  144 (204)
T 3e05_A          115 GGSGGMLEEIIDAVDRRLKSEGVIVLNAVT  144 (204)
T ss_dssp             SCCTTCHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred             CCCCcCHHHHHHHHHHhcCCCeEEEEEecc
Confidence            7652   23477888899999999998654

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.09  E-value=0.0053  Score=51.58  Aligned_cols=74  Identities=15%  Similarity=0.243  Sum_probs=55.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCcEE---ecCCCHHHHHHHc-------CCc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADSF---LVSRDQDEMQAAM-------GTM  248 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----ga~~~---v~~~~~~~~~~~~-------~~~  248 (314)
                      +.++||.|+ |++|...++.+...|++|+++.++.++.+++.+++    +.+..   .|-.+++.+.++.       +.+
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            578999987 99999999999999999999999988766655433    44332   2555565555443       379


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|+++|.
T Consensus        82 d~li~~Ag~   90 (235)
T 3l77_A           82 DVVVANAGL   90 (235)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999999884

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=97.09  E-value=0.0045  Score=55.21  Aligned_cols=97  Identities=10%  Similarity=0.031  Sum_probs=66.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhh----HHHHHHH------cCCcE-EecCCCHHHHHHHcCCccE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK----KSEAIER------LGADS-FLVSRDQDEMQAAMGTMDG  250 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~----~~~~~~~------~ga~~-~v~~~~~~~~~~~~~~~d~  250 (314)
                      .+.+|||.|+ |.+|...++.+...|.+|+++++.+..    ...+.+.      -+... ..|-.+++.+.++..++|+
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~  103 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH  103 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence            3578999998 999999999999999999999986542    2222111      12222 2355667777788889999


Q ss_pred             EEEccCCcc-----------------cHHHHHHhhccC--CEEEEEcC
Q 021300          251 IIDTVSAVH-----------------PLMPLIGLLKSQ--GKLVLVGA  279 (314)
Q Consensus       251 v~d~~g~~~-----------------~~~~~~~~l~~~--G~~v~~G~  279 (314)
                      ||.+++...                 ....+++.++..  ++++.+++
T Consensus       104 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS  151 (351)
T 3ruf_A          104 VLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS  151 (351)
T ss_dssp             EEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred             EEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence            999998521                 122345555544  48888865

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.08  E-value=0.0038  Score=53.75  Aligned_cols=99  Identities=14%  Similarity=0.170  Sum_probs=66.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHH--HHHcCCcE---EecCCCHHHHHH-------HcCCcc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEA--IERLGADS---FLVSRDQDEMQA-------AMGTMD  249 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~--~~~~ga~~---~v~~~~~~~~~~-------~~~~~d  249 (314)
                      .|+++||.|+ +++|.+.++.+...|++|+++.++.++...+  .++.+.+.   ..|-.+++.+.+       ..+.+|
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iD   85 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLD   85 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            5788999987 9999999999999999999999886643221  22334322   234455443322       235799


Q ss_pred             EEEEccCCc------------------------ccHHHHHHhhc-cCCEEEEEcCCC
Q 021300          250 GIIDTVSAV------------------------HPLMPLIGLLK-SQGKLVLVGAPE  281 (314)
Q Consensus       250 ~v~d~~g~~------------------------~~~~~~~~~l~-~~G~~v~~G~~~  281 (314)
                      ++++++|..                        ...+.+++.|+ .+|++|.+++..
T Consensus        86 iLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~  142 (258)
T 4gkb_A           86 GLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKT  142 (258)
T ss_dssp             EEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTH
T ss_pred             EEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehh
Confidence            999999842                        12334555664 479999998753

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.08  E-value=0.00067  Score=56.70  Aligned_cols=94  Identities=18%  Similarity=0.226  Sum_probs=66.7

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHHcCCccEEEEccCCc----
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAV----  258 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~g~~----  258 (314)
                      .+|||.|+ |.+|...++.+...|.+|+++++++++...+.  -+...+ .|-.+++.+.+...++|+||.++|..    
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~   82 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--EHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNNP   82 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC--TTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-----
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc--CceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCCh
Confidence            57999997 99999999999999999999999976542221  122221 24556777777778999999998753    


Q ss_pred             -------ccHHHHHHhhccC--CEEEEEcCC
Q 021300          259 -------HPLMPLIGLLKSQ--GKLVLVGAP  280 (314)
Q Consensus       259 -------~~~~~~~~~l~~~--G~~v~~G~~  280 (314)
                             .....+++.++..  .+++.+++.
T Consensus        83 ~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  113 (227)
T 3dhn_A           83 DIYDETIKVYLTIIDGVKKAGVNRFLMVGGA  113 (227)
T ss_dssp             -CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence                   1234455556544  489988764

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=97.08  E-value=0.0017  Score=58.41  Aligned_cols=91  Identities=20%  Similarity=0.238  Sum_probs=68.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc---
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---  258 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---  258 (314)
                      -.|.+|.|+|.|.+|...++.++.+|++|+++.+++...+.+ ++.|+..+      +.+.++....|+|+-++...   
T Consensus       162 l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-~~~g~~~~------~~l~ell~~aDvV~l~~Plt~~t  234 (351)
T 3jtm_A          162 LEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELE-KETGAKFV------EDLNEMLPKCDVIVINMPLTEKT  234 (351)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHH-HHHCCEEC------SCHHHHGGGCSEEEECSCCCTTT
T ss_pred             ccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHH-HhCCCeEc------CCHHHHHhcCCEEEECCCCCHHH
Confidence            468899999999999999999999999999998876444333 45676432      12345566799999987632   


Q ss_pred             --ccHHHHHHhhccCCEEEEEcC
Q 021300          259 --HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       259 --~~~~~~~~~l~~~G~~v~~G~  279 (314)
                        ..-...+..|+++..++.++.
T Consensus       235 ~~li~~~~l~~mk~gailIN~aR  257 (351)
T 3jtm_A          235 RGMFNKELIGKLKKGVLIVNNAR  257 (351)
T ss_dssp             TTCBSHHHHHHSCTTEEEEECSC
T ss_pred             HHhhcHHHHhcCCCCCEEEECcC
Confidence              113677889999999999987

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.08  E-value=0.0059  Score=51.47  Aligned_cols=74  Identities=22%  Similarity=0.300  Sum_probs=50.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v-~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      |.++||.|+ |.+|...++.+...|++|+++ .+++++.+++.+++   +.+..   .|-.+++.+.++       .+++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            467899887 999999999999999999885 67766655443332   43221   244555443332       2479


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|+++|.
T Consensus        81 d~li~~Ag~   89 (244)
T 1edo_A           81 DVVVNNAGI   89 (244)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.08  E-value=0.0092  Score=51.66  Aligned_cols=76  Identities=16%  Similarity=0.294  Sum_probs=52.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC------------hhhHHHH---HHHcCCcEE---ecCCCHHHHH
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS------------PSKKSEA---IERLGADSF---LVSRDQDEMQ  242 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~------------~~~~~~~---~~~~ga~~~---v~~~~~~~~~  242 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|+++.++            .++..+.   .++.+....   .|-.+++.+.
T Consensus         8 l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A            8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            35788999987 999999999999999999999986            3333332   234454332   2445554333


Q ss_pred             HH-------cCCccEEEEccCC
Q 021300          243 AA-------MGTMDGIIDTVSA  257 (314)
Q Consensus       243 ~~-------~~~~d~v~d~~g~  257 (314)
                      ++       .+++|++|+++|.
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~  109 (281)
T 3s55_A           88 SFVAEAEDTLGGIDIAITNAGI  109 (281)
T ss_dssp             HHHHHHHHHHTCCCEEEECCCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCC
Confidence            22       3479999999983

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.07  E-value=0.0012  Score=56.59  Aligned_cols=89  Identities=25%  Similarity=0.291  Sum_probs=57.0

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------hhHHHHHHHcC----CcEEec-C--C
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP-------------------SKKSEAIERLG----ADSFLV-S--R  236 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~-------------------~~~~~~~~~~g----a~~~v~-~--~  236 (314)
                      +.+|+|+|+|++|..+++.+...|. ++++++++.                   .+.+.+.+.+.    ...+.. .  -
T Consensus        31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  110 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  110 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            4789999999999999999998997 777777765                   45544444432    222211 1  1


Q ss_pred             CHHHHHHHcCCccEEEEccCCcccHHHHHHhhccCC
Q 021300          237 DQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQG  272 (314)
Q Consensus       237 ~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G  272 (314)
                      +.+.+.+...++|+|++++++..+-..+.+.....|
T Consensus       111 ~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~  146 (249)
T 1jw9_B          111 DDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAK  146 (249)
T ss_dssp             CHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHT
T ss_pred             CHhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcC
Confidence            233444555689999999987653333333333334

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.06  E-value=0.00076  Score=58.96  Aligned_cols=105  Identities=16%  Similarity=0.119  Sum_probs=69.2

Q ss_pred             hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCC-----cE-EecCCCHHHHHHHcC
Q 021300          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA-----DS-FLVSRDQDEMQAAMG  246 (314)
Q Consensus       174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga-----~~-~v~~~~~~~~~~~~~  246 (314)
                      ++.....--.+.+++|+|+|++|.+++..+...|+ +++++.|+.++.++++++++.     .. ..+..+   +.+...
T Consensus       117 ~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l~  193 (283)
T 3jyo_A          117 GMEEGLPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVIA  193 (283)
T ss_dssp             HHHHHCTTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHHH
T ss_pred             HHHHhCcCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHHh
Confidence            44443323568899999999999999999999999 799999999888777776642     21 122222   223334


Q ss_pred             CccEEEEccCCccc----HHHHHHhhccCCEEEEEcCCC
Q 021300          247 TMDGIIDTVSAVHP----LMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       247 ~~d~v~d~~g~~~~----~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      .+|+||++++....    .......++++..++++-..+
T Consensus       194 ~~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~DlvY~P  232 (283)
T 3jyo_A          194 AADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMP  232 (283)
T ss_dssp             HSSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEECCCSS
T ss_pred             cCCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEecCCC
Confidence            69999999863210    111234667777777775533

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.06  E-value=0.0064  Score=52.80  Aligned_cols=75  Identities=13%  Similarity=0.229  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCChh---hHHHHHHHcCC-cEE-ecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGA-DSF-LVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga---g~vG~~a~~~a~~~g~~vi~v~~~~~---~~~~~~~~~ga-~~~-v~~~~~~~~~~~-------~~~  247 (314)
                      .|.++||.|+   |++|.+.++.+...|++|+++.++++   ..+++.++.+. ..+ .|-.+++.+.++       .++
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS   99 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999885   69999999999989999999998874   33444444442 222 344555443332       247


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus       100 iD~lv~~Ag~  109 (285)
T 2p91_A          100 LDIIVHSIAY  109 (285)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=97.06  E-value=0.0033  Score=58.62  Aligned_cols=75  Identities=17%  Similarity=0.185  Sum_probs=56.0

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC-cE-EecCCCHHHHHHHcCCccEEEEccCCc
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-DS-FLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga-~~-~v~~~~~~~~~~~~~~~d~v~d~~g~~  258 (314)
                      +.+|+|+|+|.+|..+++.+...|.+|+++.++.++.+++.++++. .. .++..+.+.+.++..++|+|+++++..
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~   79 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT   79 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence            5689999999999999998888899999999998777666555542 11 224555566666667899999999854

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.06  E-value=0.0069  Score=53.61  Aligned_cols=76  Identities=22%  Similarity=0.315  Sum_probs=52.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC------------hhhHHHHH---HHcCCcEE---ecCCCHHHHH
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS------------PSKKSEAI---ERLGADSF---LVSRDQDEMQ  242 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~------------~~~~~~~~---~~~ga~~~---v~~~~~~~~~  242 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|++++++            .++..++.   ++.+.+..   .|-.+++.+.
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            35788999987 999999999999999999998775            34433332   33454332   2445554333


Q ss_pred             HH-------cCCccEEEEccCC
Q 021300          243 AA-------MGTMDGIIDTVSA  257 (314)
Q Consensus       243 ~~-------~~~~d~v~d~~g~  257 (314)
                      ++       .+.+|++|+++|.
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~  145 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGI  145 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence            32       2479999999983

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=97.06  E-value=0.00095  Score=55.85  Aligned_cols=99  Identities=26%  Similarity=0.258  Sum_probs=67.4

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHHc---C-----C-cEEecCCCHHHHHHHcCCcc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERL---G-----A-DSFLVSRDQDEMQAAMGTMD  249 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~~~---g-----a-~~~v~~~~~~~~~~~~~~~d  249 (314)
                      ++++++||-+|+|. |..+..+++..|  .+++.++.++...+.+.+.+   +     . ..-+...+........+.||
T Consensus        75 ~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD  153 (226)
T 1i1n_A           75 LHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYD  153 (226)
T ss_dssp             SCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEE
T ss_pred             CCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcC
Confidence            68899999999876 778888888765  58999999987665543322   2     1 11122222111111234799


Q ss_pred             EEEEccCCcccHHHHHHhhccCCEEEEEcCC
Q 021300          250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       250 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      +|+........+..+.+.|+++|+++..-.+
T Consensus       154 ~i~~~~~~~~~~~~~~~~LkpgG~lv~~~~~  184 (226)
T 1i1n_A          154 AIHVGAAAPVVPQALIDQLKPGGRLILPVGP  184 (226)
T ss_dssp             EEEECSBBSSCCHHHHHTEEEEEEEEEEESC
T ss_pred             EEEECCchHHHHHHHHHhcCCCcEEEEEEec
Confidence            9988776666678999999999998886443

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=97.06  E-value=0.0033  Score=55.68  Aligned_cols=99  Identities=19%  Similarity=0.148  Sum_probs=67.0

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----C--CcEE--ecCCCHHHHHHHcCCccEEE
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----G--ADSF--LVSRDQDEMQAAMGTMDGII  252 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----g--a~~~--v~~~~~~~~~~~~~~~d~v~  252 (314)
                      .++.+|||.|+ |.+|...+..+...|.+|++++++..+...+.+.+    +  ...+  .|-.+++.+.++..++|+||
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   88 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA   88 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence            46789999998 99999999999889999999999877655443322    2  2222  24444455555556899999


Q ss_pred             EccCCcc--------------cHHHHHHhhcc---CCEEEEEcCC
Q 021300          253 DTVSAVH--------------PLMPLIGLLKS---QGKLVLVGAP  280 (314)
Q Consensus       253 d~~g~~~--------------~~~~~~~~l~~---~G~~v~~G~~  280 (314)
                      .+++...              ....+++.+.+   .++++.+++.
T Consensus        89 h~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~  133 (342)
T 1y1p_A           89 HIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSST  133 (342)
T ss_dssp             ECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCG
T ss_pred             EeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccH
Confidence            9987431              12234444442   3789988764

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.06  E-value=0.0073  Score=47.27  Aligned_cols=95  Identities=23%  Similarity=0.123  Sum_probs=63.1

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC-hhhHHHHHHHc--CCcEEe-cCCCHHHHHHH-cCCccEEEEccCCc
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIERL--GADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAV  258 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~-~~~~~~~~~~~--ga~~~v-~~~~~~~~~~~-~~~~d~v~d~~g~~  258 (314)
                      .++++|+|+|.+|...++.+...|.+|++++++ +++.+.+.+.+  |...+. |..+++.+.+. ..++|.++-++++.
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d   82 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND   82 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence            467899999999999999999999999999997 45444454333  444432 44455666554 56899999999876


Q ss_pred             ccHHH---HHHhhccCCEEEEEc
Q 021300          259 HPLMP---LIGLLKSQGKLVLVG  278 (314)
Q Consensus       259 ~~~~~---~~~~l~~~G~~v~~G  278 (314)
                      ..-..   ..+.+.+..+++..-
T Consensus        83 ~~n~~~~~~a~~~~~~~~ii~~~  105 (153)
T 1id1_A           83 ADNAFVVLSAKDMSSDVKTVLAV  105 (153)
T ss_dssp             HHHHHHHHHHHHHTSSSCEEEEC
T ss_pred             HHHHHHHHHHHHHCCCCEEEEEE
Confidence            42222   222333444665543

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.05  E-value=0.0038  Score=53.12  Aligned_cols=75  Identities=17%  Similarity=0.299  Sum_probs=55.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.++||.|+ |++|...++.+...|++|+++.++.++.+++.+++   +....   .|-.+++.+.++       .+++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI   87 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5788999997 99999999999999999999999988776665554   33222   244454433332       2479


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|+++|.
T Consensus        88 d~li~~Ag~   96 (253)
T 3qiv_A           88 DYLVNNAAI   96 (253)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999875

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.05  E-value=0.0089  Score=51.63  Aligned_cols=100  Identities=20%  Similarity=0.307  Sum_probs=65.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhh-------HHHHH---HHcCCcEE---ecCCCHHHHHHH----
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-------KSEAI---ERLGADSF---LVSRDQDEMQAA----  244 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~-------~~~~~---~~~ga~~~---v~~~~~~~~~~~----  244 (314)
                      .|.++||.|+ +++|.+.++.+...|++|+++.++.++       .+++.   +..+.+..   .|-.+++.+.++    
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   84 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT   84 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            5788999997 999999999999999999999988642       22322   23344322   244555433322    


Q ss_pred             ---cCCccEEEEccCCcc-------------------------cHHHHHHhhc--cCCEEEEEcCCCC
Q 021300          245 ---MGTMDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLVGAPEK  282 (314)
Q Consensus       245 ---~~~~d~v~d~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~G~~~~  282 (314)
                         .+.+|++|+++|...                         ..+.+++.|+  .+|+++.+++..+
T Consensus        85 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~  152 (274)
T 3e03_A           85 VDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPS  152 (274)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCC
T ss_pred             HHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHh
Confidence               357999999998420                         1233444553  3689999987654

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=97.04  E-value=0.00089  Score=56.53  Aligned_cols=97  Identities=19%  Similarity=0.150  Sum_probs=64.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHHcCCccEEEEccCCcc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~g~~~  259 (314)
                      +.++||.|+ |.+|...++.+...|+  +|+++++++++..+.. .-+...+ .|-.+++.+.+...++|++|+++|...
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~   96 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTR   96 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-cCCceEEecCcCCHHHHHHHhcCCCEEEECCCccc
Confidence            578999997 9999999999988899  9999998875432221 1122222 233444555566668999999998532


Q ss_pred             --------------cHHHHHHhhcc--CCEEEEEcCCC
Q 021300          260 --------------PLMPLIGLLKS--QGKLVLVGAPE  281 (314)
Q Consensus       260 --------------~~~~~~~~l~~--~G~~v~~G~~~  281 (314)
                                    ....+++.+++  .++++.+++..
T Consensus        97 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~  134 (242)
T 2bka_A           97 GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKG  134 (242)
T ss_dssp             HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             ccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCc
Confidence                          12234444543  36899998754

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=97.04  E-value=0.0025  Score=57.69  Aligned_cols=69  Identities=25%  Similarity=0.259  Sum_probs=53.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccC
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVS  256 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g  256 (314)
                      -.|.+|+|.|.|.+|..+++.+...|++|++.+++.++..++.++++++.+ +..  +   .+...+|+++-|..
T Consensus       171 L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v-~~~--~---ll~~~~DIvip~a~  239 (364)
T 1leh_A          171 LEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-APN--A---IYGVTCDIFAPCAL  239 (364)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-CGG--G---TTTCCCSEEEECSC
T ss_pred             CCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE-ChH--H---HhccCCcEeeccch
Confidence            578999999999999999999999999999888888888888888887543 211  1   11236788777654

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.04  E-value=0.0014  Score=57.10  Aligned_cols=102  Identities=17%  Similarity=0.144  Sum_probs=69.6

Q ss_pred             hhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEE
Q 021300          173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI  251 (314)
Q Consensus       173 ~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v  251 (314)
                      .+|...+.--.+.+++|+|+|+.|.+++..++..|+ +++++.|+.++.+++++++.   .+..   +.+.+ . .+|+|
T Consensus       111 ~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~---~~~~---~~l~~-l-~~Div  182 (282)
T 3fbt_A          111 KMLSKFRVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK---VISY---DELSN-L-KGDVI  182 (282)
T ss_dssp             HHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE---EEEH---HHHTT-C-CCSEE
T ss_pred             HHHHHcCCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC---cccH---HHHHh-c-cCCEE
Confidence            345443423468999999999999999999999998 89999999988877765543   1211   22223 2 79999


Q ss_pred             EEccCCcc--c---HHHHHHhhccCCEEEEEcCCCC
Q 021300          252 IDTVSAVH--P---LMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       252 ~d~~g~~~--~---~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      |++++...  .   .......++++..++++-..+.
T Consensus       183 InaTp~Gm~~~~~~~pi~~~~l~~~~~v~DlvY~P~  218 (282)
T 3fbt_A          183 INCTPKGMYPKEGESPVDKEVVAKFSSAVDLIYNPV  218 (282)
T ss_dssp             EECSSTTSTTSTTCCSSCHHHHTTCSEEEESCCSSS
T ss_pred             EECCccCccCCCccCCCCHHHcCCCCEEEEEeeCCC
Confidence            99985321  0   1123456778888888865443

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.04  E-value=0.0053  Score=51.16  Aligned_cols=74  Identities=12%  Similarity=0.061  Sum_probs=59.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHH-cCCccEEEEccCCcc
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVH  259 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v-~~~~~~~~~~~-~~~~d~v~d~~g~~~  259 (314)
                      +++|+|+|.+|...++.+...|.+++++++++++.+++.++++...+. |..+++.+.+. ...+|+++-++++..
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~   77 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDE   77 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcH
Confidence            588999999999999999999999999999999888877777765443 44555666554 468999999998875

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.04  E-value=0.01  Score=50.43  Aligned_cols=72  Identities=17%  Similarity=0.194  Sum_probs=50.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cC-CCHHHHHHHcCCccEEEEccCC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VS-RDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v-~~-~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      ..|.++||.|+ |++|...++.+...|++|++++++++..    ++++...++ |- .+.+.+.+...++|++|+++|.
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~iD~lv~~Ag~   91 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----KRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGG   91 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH----HhhCCeEEEeeHHHHHHHHHHHhcCCCEEEECCCC
Confidence            56789999997 9999999999999999999999987432    344522222 22 1223333333489999999974

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=97.03  E-value=0.0052  Score=51.61  Aligned_cols=113  Identities=13%  Similarity=0.009  Sum_probs=72.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      -.|.+|||+|+|.+|...++.+...|++|+++..... ...++.++.+...+-..-.+    ....++|+||-++++.. 
T Consensus        29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~----~dL~~adLVIaAT~d~~-  103 (223)
T 3dfz_A           29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGE----EDLLNVFFIVVATNDQA-  103 (223)
T ss_dssp             CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCG----GGSSSCSEEEECCCCTH-
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCH----hHhCCCCEEEECCCCHH-
Confidence            4578899999999999999999999999999887643 34455444334332111111    22357999999999886 


Q ss_pred             HHHHHHhhccCCEEEEEcCCCCCcccchhhhhcC-ceeEe
Q 021300          261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMG-EEEDS  299 (314)
Q Consensus       261 ~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~  299 (314)
                      ....+...++.|..|.+...+...+|-+..++.+ .++|-
T Consensus       104 ~N~~I~~~ak~gi~VNvvD~p~~~~f~~Paiv~rg~l~ia  143 (223)
T 3dfz_A          104 VNKFVKQHIKNDQLVNMASSFSDGNIQIPAQFSRGRLSLA  143 (223)
T ss_dssp             HHHHHHHHSCTTCEEEC-----CCSEECCEEEEETTEEEE
T ss_pred             HHHHHHHHHhCCCEEEEeCCcccCeEEEeeEEEeCCEEEE
Confidence            5555555555888887766665566665555543 44444

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.02  E-value=0.0054  Score=52.96  Aligned_cols=100  Identities=19%  Similarity=0.295  Sum_probs=65.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.++||.|+ |.+|...+..+...|++|+++.++.++.+++.+   ..+.+..   .|-.+++.+.++       .+.+
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  112 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI  112 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            4678999987 999999998888889999999988765444432   2343321   244555433332       2469


Q ss_pred             cEEEEccCCccc---------------------------HHHHHHhhc--cCCEEEEEcCCCC
Q 021300          249 DGIIDTVSAVHP---------------------------LMPLIGLLK--SQGKLVLVGAPEK  282 (314)
Q Consensus       249 d~v~d~~g~~~~---------------------------~~~~~~~l~--~~G~~v~~G~~~~  282 (314)
                      |++|+++|....                           ...+++.++  ..|+++.+++..+
T Consensus       113 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~  175 (279)
T 3ctm_A          113 DVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISG  175 (279)
T ss_dssp             SEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTT
T ss_pred             CEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHh
Confidence            999999873210                           234455553  3589999987643

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=97.02  E-value=0.0011  Score=55.51  Aligned_cols=98  Identities=19%  Similarity=0.193  Sum_probs=67.1

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCC-------CeEEEEeCChhhHHHHHHHc---C-------CcEEecCCCHHHHH
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG-------VKVTVISTSPSKKSEAIERL---G-------ADSFLVSRDQDEMQ  242 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g-------~~vi~v~~~~~~~~~~~~~~---g-------a~~~v~~~~~~~~~  242 (314)
                      .++++++||-+|+|. |..+..+++..+       .+++.++.+++..+.+.+.+   +       .-.++. .+.....
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~-~d~~~~~  158 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE-GDGRKGY  158 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE-SCGGGCC
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEE-CCcccCC
Confidence            368999999999876 888888888765       48999999987665543322   1       112222 2211100


Q ss_pred             HHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcC
Q 021300          243 AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       243 ~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      ...+.||+|+...........+.+.|+++|+++..-.
T Consensus       159 ~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~~  195 (227)
T 1r18_A          159 PPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVG  195 (227)
T ss_dssp             GGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             CcCCCccEEEECCchHHHHHHHHHHhcCCCEEEEEEe
Confidence            1125799999887766667899999999999887643

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.01  E-value=0.0047  Score=52.74  Aligned_cols=73  Identities=14%  Similarity=0.033  Sum_probs=50.1

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH--HcCCcE-EecCCCHH-HHH---HHcCCccEEEEccCC
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE--RLGADS-FLVSRDQD-EMQ---AAMGTMDGIIDTVSA  257 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~--~~ga~~-~v~~~~~~-~~~---~~~~~~d~v~d~~g~  257 (314)
                      ++||.|+ |++|...++.+...|++|+++++++++.+++.+  ..+.+. .++..+.+ .+.   +..+++|++|+++|.
T Consensus         3 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~nAg~   82 (254)
T 1zmt_A            3 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF   82 (254)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEECCCc
Confidence            6888887 999999999999999999999988776544432  224332 22444432 222   223589999999874


Q ss_pred             c
Q 021300          258 V  258 (314)
Q Consensus       258 ~  258 (314)
                      .
T Consensus        83 ~   83 (254)
T 1zmt_A           83 A   83 (254)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=97.01  E-value=0.0074  Score=50.88  Aligned_cols=74  Identities=12%  Similarity=0.123  Sum_probs=52.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCC-------eEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-----
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGV-------KVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-----  244 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~-------~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-----  244 (314)
                      +.++||.|+ |.+|...++.+...|+       +|+++.+++++.+++.+++   +....   .|-.+++.+.++     
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            467899997 9999999988888898       8999999987766665544   33221   244455433332     


Q ss_pred             --cCCccEEEEccCC
Q 021300          245 --MGTMDGIIDTVSA  257 (314)
Q Consensus       245 --~~~~d~v~d~~g~  257 (314)
                        .+++|++|+++|.
T Consensus        82 ~~~g~id~li~~Ag~   96 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGV   96 (244)
T ss_dssp             HHTSCCSEEEECCCC
T ss_pred             HhCCCCCEEEEcCCc
Confidence              2479999999873

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.00  E-value=0.0012  Score=55.79  Aligned_cols=99  Identities=28%  Similarity=0.273  Sum_probs=67.9

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc-EEecCCCHHHHHHHcCCccEEEEcc
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD-SFLVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~-~~v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      .++++++||.+|+| .|..+..+++..+.+++.++.++...+.+.+.   .|.+ .-+...+..........||+|+.+.
T Consensus        88 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Ii~~~  166 (235)
T 1jg1_A           88 NLKPGMNILEVGTG-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVIIVTA  166 (235)
T ss_dssp             TCCTTCCEEEECCT-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECS
T ss_pred             CCCCCCEEEEEeCC-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCCCccEEEECC
Confidence            36899999999998 58888999988768999999988766555433   3432 1122222110001123599999887


Q ss_pred             CCcccHHHHHHhhccCCEEEEEcC
Q 021300          256 SAVHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       256 g~~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      .-......+.+.|+++|+++..-.
T Consensus       167 ~~~~~~~~~~~~L~pgG~lvi~~~  190 (235)
T 1jg1_A          167 GAPKIPEPLIEQLKIGGKLIIPVG  190 (235)
T ss_dssp             BBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             cHHHHHHHHHHhcCCCcEEEEEEe
Confidence            766567889999999999887643

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.00  E-value=0.0042  Score=53.89  Aligned_cols=76  Identities=22%  Similarity=0.308  Sum_probs=54.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~  247 (314)
                      ..+.++||.|+ +++|.+.++.+...|++|+++.++.++.+++.+++   +.+..   .|-.+++.+.++       .+.
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            45788999997 99999999999999999999999988776665554   43322   244555433322       347


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus       102 id~lv~nAg~  111 (279)
T 3sju_A          102 IGILVNSAGR  111 (279)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999984

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.00  E-value=0.0066  Score=54.06  Aligned_cols=44  Identities=18%  Similarity=0.061  Sum_probs=36.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEe-CChhhHHHHHHH
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAIER  226 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~-~~~~~~~~~~~~  226 (314)
                      .+.++||.|+ |++|.+.++.+...|++|++++ +++++.+++.++
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~   90 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSAT   90 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence            4678999887 9999999999999999999999 888776665544

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.99  E-value=0.0017  Score=56.05  Aligned_cols=90  Identities=19%  Similarity=0.226  Sum_probs=66.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc-
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-  260 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~-  260 (314)
                      -.| +++|+|+|.+|.+.+..+...|++++++.++.++.+++.++++..  .  .+   ..+. ..+|+|+.+++.... 
T Consensus       115 l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~--~--~~---~~~~-~~~Divi~~tp~~~~~  185 (263)
T 2d5c_A          115 LKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR--A--VP---LEKA-REARLLVNATRVGLED  185 (263)
T ss_dssp             CCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE--E--CC---GGGG-GGCSEEEECSSTTTTC
T ss_pred             CCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc--h--hh---Hhhc-cCCCEEEEccCCCCCC
Confidence            356 999999999999999999989999999999988888888888864  2  12   1234 579999999986520 


Q ss_pred             -H-HH-HHHhhccCCEEEEEcCC
Q 021300          261 -L-MP-LIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       261 -~-~~-~~~~l~~~G~~v~~G~~  280 (314)
                       . .. ....++++..++.++..
T Consensus       186 ~~~~~l~~~~l~~g~~viD~~~~  208 (263)
T 2d5c_A          186 PSASPLPAELFPEEGAAVDLVYR  208 (263)
T ss_dssp             TTCCSSCGGGSCSSSEEEESCCS
T ss_pred             CCCCCCCHHHcCCCCEEEEeecC
Confidence             0 00 14567777788887654

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.99  E-value=0.00029  Score=62.39  Aligned_cols=118  Identities=15%  Similarity=0.119  Sum_probs=78.5

Q ss_pred             cccchhhhhhhhhhHh---------cCCCCCCCEEEEEcCC-hHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-
Q 021300          162 APLLCAGITVYSPLRF---------YGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-  230 (314)
Q Consensus       162 a~~~~~~~ta~~~l~~---------~~~~~~g~~vlI~Gag-~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~-  230 (314)
                      ..+||....+...+++         .+.--.|.+++|+|+| .+|..+++++...|++|++..++..+..+..+.++.. 
T Consensus       146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~  225 (320)
T 1edz_A          146 SILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNK  225 (320)
T ss_dssp             CCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCC
T ss_pred             CcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhc
Confidence            4567777777766766         3323578999999997 5699999999999999988877744332222233321 


Q ss_pred             -EEecC--CCHHHHHHHcCCccEEEEccCCccc-HHHHHHhhccCCEEEEEcCCC
Q 021300          231 -SFLVS--RDQDEMQAAMGTMDGIIDTVSAVHP-LMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       231 -~~v~~--~~~~~~~~~~~~~d~v~d~~g~~~~-~~~~~~~l~~~G~~v~~G~~~  281 (314)
                       .....  .+++.+.+....+|+||-++|.... +.  -+.++++-.++++|.+.
T Consensus       226 ~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~p~~vI~--~e~vk~GavVIDVgi~r  278 (320)
T 1edz_A          226 HHVEDLGEYSEDLLKKCSLDSDVVITGVPSENYKFP--TEYIKEGAVCINFACTK  278 (320)
T ss_dssp             CEEEEEEECCHHHHHHHHHHCSEEEECCCCTTCCBC--TTTSCTTEEEEECSSSC
T ss_pred             ccccccccccHhHHHHHhccCCEEEECCCCCcceeC--HHHcCCCeEEEEcCCCc
Confidence             11000  1124556667789999999998752 22  23468888899999864

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.99  E-value=0.0079  Score=52.32  Aligned_cols=75  Identities=28%  Similarity=0.343  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhh-------HHHHH---HHcCCcEE---ecCCCHHHHHHH----
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-------KSEAI---ERLGADSF---LVSRDQDEMQAA----  244 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~-------~~~~~---~~~ga~~~---v~~~~~~~~~~~----  244 (314)
                      .+.++||.|+ +++|.+.++.+...|++|+++.++.++       .+++.   ++.+.+..   .|-.+++.+.++    
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   87 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT   87 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            4688999997 999999999999999999999998752       22222   33354322   244555433322    


Q ss_pred             ---cCCccEEEEccCC
Q 021300          245 ---MGTMDGIIDTVSA  257 (314)
Q Consensus       245 ---~~~~d~v~d~~g~  257 (314)
                         .+.+|++|+++|.
T Consensus        88 ~~~~g~id~lvnnAg~  103 (285)
T 3sc4_A           88 VEQFGGIDICVNNASA  103 (285)
T ss_dssp             HHHHSCCSEEEECCCC
T ss_pred             HHHcCCCCEEEECCCC
Confidence               3479999999984

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.98  E-value=0.0042  Score=55.59  Aligned_cols=89  Identities=17%  Similarity=0.182  Sum_probs=69.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc--
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--  259 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~--  259 (314)
                      -.|.+|.|+|.|.+|...++.++.+|.+|+++++...+.  ..+++|++.    .+   +.++....|+|+.++....  
T Consensus       163 l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~g~~~----~~---l~ell~~aDvV~l~~P~t~~t  233 (335)
T 2g76_A          163 LNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPE--VSASFGVQQ----LP---LEEIWPLCDFITVHTPLLPST  233 (335)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHH--HHHHTTCEE----CC---HHHHGGGCSEEEECCCCCTTT
T ss_pred             CCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh--hhhhcCcee----CC---HHHHHhcCCEEEEecCCCHHH
Confidence            468899999999999999999999999999998876542  345678743    12   2345567999999886432  


Q ss_pred             --cH-HHHHHhhccCCEEEEEcC
Q 021300          260 --PL-MPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       260 --~~-~~~~~~l~~~G~~v~~G~  279 (314)
                        .+ ...+..|++++.++.+|.
T Consensus       234 ~~li~~~~l~~mk~gailIN~ar  256 (335)
T 2g76_A          234 TGLLNDNTFAQCKKGVRVVNCAR  256 (335)
T ss_dssp             TTSBCHHHHTTSCTTEEEEECSC
T ss_pred             HHhhCHHHHhhCCCCcEEEECCC
Confidence              12 467889999999999987

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.98  E-value=0.0026  Score=56.19  Aligned_cols=89  Identities=19%  Similarity=0.355  Sum_probs=68.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc--
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--  259 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~--  259 (314)
                      -.|.+|.|+|.|.+|...++.++.+|++|+++++++++ . ..+++|++. .   +.   .++....|+|+.++....  
T Consensus       140 l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~-~~~~~g~~~-~---~l---~ell~~aDvV~l~~p~~~~t  210 (307)
T 1wwk_A          140 LEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-E-RAKEVNGKF-V---DL---ETLLKESDVVTIHVPLVEST  210 (307)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-H-HHHHTTCEE-C---CH---HHHHHHCSEEEECCCCSTTT
T ss_pred             cCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-h-hHhhcCccc-c---CH---HHHHhhCCEEEEecCCChHH
Confidence            46889999999999999999999999999999988765 2 345678743 1   22   233446899999886422  


Q ss_pred             --cH-HHHHHhhccCCEEEEEcC
Q 021300          260 --PL-MPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       260 --~~-~~~~~~l~~~G~~v~~G~  279 (314)
                        .+ ...+..|+++..++.++.
T Consensus       211 ~~li~~~~l~~mk~ga~lin~ar  233 (307)
T 1wwk_A          211 YHLINEERLKLMKKTAILINTSR  233 (307)
T ss_dssp             TTCBCHHHHHHSCTTCEEEECSC
T ss_pred             hhhcCHHHHhcCCCCeEEEECCC
Confidence              12 467788999999999987

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.98  E-value=0.0075  Score=52.18  Aligned_cols=75  Identities=15%  Similarity=0.191  Sum_probs=51.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH------cCCc
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA------MGTM  248 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~------~~~~  248 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|+++.+.+ +.+++.+++   +....   .|-.+++.+.++      .+++
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~i  107 (273)
T 3uf0_A           29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRV  107 (273)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST-HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence            35788999987 9999999999999999999988654 333443333   33221   244554433332      2479


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|+++|.
T Consensus       108 D~lv~nAg~  116 (273)
T 3uf0_A          108 DVLVNNAGI  116 (273)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCCC
Confidence            999999884

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.98  E-value=0.003  Score=57.18  Aligned_cols=132  Identities=15%  Similarity=0.102  Sum_probs=86.0

Q ss_pred             cchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC----hhh----H----HHHHHHcCCc
Q 021300          164 LLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS----PSK----K----SEAIERLGAD  230 (314)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~----~~~----~----~~~~~~~ga~  230 (314)
                      ..+...+.+.+++..+.--+..+|+|+|+|..|..+++++...|+ +++++++.    .++    .    ++++++... 
T Consensus       172 asV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~-  250 (388)
T 1vl6_A          172 AVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP-  250 (388)
T ss_dssp             HHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT-
T ss_pred             HHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc-
Confidence            334445556666655533467899999999999999999999999 78888887    443    2    233333221 


Q ss_pred             EEecCCCHHHHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeeec
Q 021300          231 SFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWWQ  302 (314)
Q Consensus       231 ~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~~  302 (314)
                          ......+.+...++|++|-+++........++.|+++-.++.+..+.  .++...+.+.-+..+.-.+
T Consensus       251 ----~~~~~~L~eav~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSNPt--~E~~p~~a~~~g~~i~atG  316 (388)
T 1vl6_A          251 ----ERLSGDLETALEGADFFIGVSRGNILKPEWIKKMSRKPVIFALANPV--PEIDPELAREAGAFIVATG  316 (388)
T ss_dssp             ----TCCCSCHHHHHTTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSSS--CSSCHHHHHHTTCSEEEES
T ss_pred             ----cCchhhHHHHHccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCCCC--CCCCHHHHHHhcCeEEEeC
Confidence                11123345556678999999874445677888899888777776654  3555555444444444333

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.97  E-value=0.0023  Score=56.71  Aligned_cols=89  Identities=24%  Similarity=0.351  Sum_probs=68.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc--
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--  259 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~--  259 (314)
                      -.|.++.|+|.|.+|...++.++.+|++|+++++++++. . .+++|+.. .   +.   .++....|+|+.++....  
T Consensus       140 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~-~~~~g~~~-~---~l---~ell~~aDvVvl~~P~~~~t  210 (313)
T 2ekl_A          140 LAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIRE-K-AEKINAKA-V---SL---EELLKNSDVISLHVTVSKDA  210 (313)
T ss_dssp             CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHH-H-HHHTTCEE-C---CH---HHHHHHCSEEEECCCCCTTS
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchh-H-HHhcCcee-c---CH---HHHHhhCCEEEEeccCChHH
Confidence            468899999999999999999999999999999887653 2 35678653 1   22   233346899999886432  


Q ss_pred             --cH-HHHHHhhccCCEEEEEcC
Q 021300          260 --PL-MPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       260 --~~-~~~~~~l~~~G~~v~~G~  279 (314)
                        .+ ...+..|++++.++.++.
T Consensus       211 ~~li~~~~l~~mk~ga~lIn~ar  233 (313)
T 2ekl_A          211 KPIIDYPQFELMKDNVIIVNTSR  233 (313)
T ss_dssp             CCSBCHHHHHHSCTTEEEEESSC
T ss_pred             HHhhCHHHHhcCCCCCEEEECCC
Confidence              12 567788999999999977

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.97  E-value=0.0035  Score=54.93  Aligned_cols=98  Identities=14%  Similarity=0.113  Sum_probs=68.5

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc--EEecCCCHHHHHHHcCCccEEEE
Q 021300          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD--SFLVSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       179 ~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~--~~v~~~~~~~~~~~~~~~d~v~d  253 (314)
                      ..+++|++||-+|+|. |..+..+++..|++++.++.++...+.+.+.   .|..  .-+...+..   ...+.||+|+-
T Consensus        68 ~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~---~~~~~fD~v~~  143 (302)
T 3hem_A           68 LNLEPGMTLLDIGCGW-GSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWE---EFDEPVDRIVS  143 (302)
T ss_dssp             TCCCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGG---GCCCCCSEEEE
T ss_pred             cCCCCcCEEEEeeccC-cHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHH---HcCCCccEEEE
Confidence            3478999999999975 8888999998889999999998876555433   3422  112222222   12567999887


Q ss_pred             ccCC---------------cccHHHHHHhhccCCEEEEEcCC
Q 021300          254 TVSA---------------VHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       254 ~~g~---------------~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      ...-               ...+..+.+.|+++|++++....
T Consensus       144 ~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  185 (302)
T 3hem_A          144 LGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT  185 (302)
T ss_dssp             ESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred             cchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence            4321               13477888999999999987653

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.97  E-value=0.0018  Score=56.05  Aligned_cols=95  Identities=13%  Similarity=0.158  Sum_probs=67.9

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHC--CCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHHcCCccEEEEccCCc---
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAV---  258 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~--g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~g~~---  258 (314)
                      +|||.|+ |.+|...++.+...  |.+|+++++++++..++. ..+...+ .|..+++.+.+...++|+||.+++..   
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~   80 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA-DQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDN   80 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH-HTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSCH
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh-hcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcCc
Confidence            5899998 99999999888877  899999999877655443 3355433 35667777778778899999998742   


Q ss_pred             ----ccHHHHHHhhccC--CEEEEEcCCC
Q 021300          259 ----HPLMPLIGLLKSQ--GKLVLVGAPE  281 (314)
Q Consensus       259 ----~~~~~~~~~l~~~--G~~v~~G~~~  281 (314)
                          .....+++.++..  ++++.++...
T Consensus        81 ~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~  109 (287)
T 2jl1_A           81 TLLIVQHANVVKAARDAGVKHIAYTGYAF  109 (287)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred             hHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence                1233445555443  4888887643

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.96  E-value=0.0054  Score=52.18  Aligned_cols=70  Identities=19%  Similarity=0.252  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHH-------cCCccEEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAA-------MGTMDGIID  253 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~-------~~~~d~v~d  253 (314)
                      .+.++||.|+ |++|.+.++.+...|++|+++.++++.     ++.+...+ .|-.+++.+.++       .+++|++|+
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~   80 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----EQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVN   80 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----SCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----hcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4678999997 999999999999999999999988652     12343222 355555444333       247999999


Q ss_pred             ccCC
Q 021300          254 TVSA  257 (314)
Q Consensus       254 ~~g~  257 (314)
                      ++|.
T Consensus        81 ~Ag~   84 (250)
T 2fwm_X           81 AAGI   84 (250)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9884

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.96  E-value=0.0032  Score=53.72  Aligned_cols=95  Identities=20%  Similarity=0.231  Sum_probs=63.7

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHH----H---cCCccEEEE
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA----A---MGTMDGIID  253 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~----~---~~~~d~v~d  253 (314)
                      .-+.++||.|+ |++|.+.++.+...|++|+++++++++...      ....++-.+.+.+.+    +   .+.+|++|+
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~------~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~   93 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVC   93 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS------EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            33678999997 999999999999999999999998764321      122233444433332    2   236899999


Q ss_pred             ccCCc-------c-------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300          254 TVSAV-------H-------------------PLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       254 ~~g~~-------~-------------------~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      ++|..       .                   .+..+++.++++|+++.+++..+
T Consensus        94 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  148 (251)
T 3orf_A           94 AAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAA  148 (251)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             CCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhh
Confidence            99831       0                   12334556667899999987543

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=96.96  E-value=0.0023  Score=55.25  Aligned_cols=95  Identities=15%  Similarity=0.194  Sum_probs=66.8

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHC--CCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHHcCCccEEEEccCCc---
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAV---  258 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~--g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~g~~---  258 (314)
                      +|||.|+ |.+|...++.+...  |.+|+++++++++...+. ..+...+ .|..+++.+.+...++|+||.+++..   
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~   79 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA-AQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQ   79 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH-HTTCEEEECCTTCHHHHHHHTTTCSEEEECC------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh-cCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCchH
Confidence            4889998 99999999988887  899999999877654443 3354432 35667777778888999999998742   


Q ss_pred             --ccHHHHHHhhcc-C-CEEEEEcCCC
Q 021300          259 --HPLMPLIGLLKS-Q-GKLVLVGAPE  281 (314)
Q Consensus       259 --~~~~~~~~~l~~-~-G~~v~~G~~~  281 (314)
                        .....+++.++. + ++++.+++..
T Consensus        80 ~~~~~~~l~~a~~~~~~~~~v~~Ss~~  106 (286)
T 2zcu_A           80 RAPQHRNVINAAKAAGVKFIAYTSLLH  106 (286)
T ss_dssp             --CHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence              224455555544 2 5888887643

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.95  E-value=0.0042  Score=52.52  Aligned_cols=75  Identities=17%  Similarity=0.286  Sum_probs=54.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH----cCCcEE---ecCCCHHHHHHHc-------CC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGADSF---LVSRDQDEMQAAM-------GT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~----~ga~~~---v~~~~~~~~~~~~-------~~  247 (314)
                      .+.++||.|+ |.+|...++.+...|++|+++.+++++.+++.++    .+.+..   .|-.+++.+.++.       ++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            4678999987 9999999999999999999999998766555443    343322   2445554443332       47


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|.++|.
T Consensus        86 ~d~vi~~Ag~   95 (248)
T 2pnf_A           86 IDILVNNAGI   95 (248)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.95  E-value=0.0013  Score=55.05  Aligned_cols=86  Identities=21%  Similarity=0.171  Sum_probs=60.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHc---CCccEEEEccCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM---GTMDGIIDTVSAV  258 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~---~~~d~v~d~~g~~  258 (314)
                      .+.++||.|+ +++|.+.++.+...|++|+++.++.+              .|-.+++.+.++.   +.+|+++++.|..
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~g~id~lv~nAg~~   70 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETIGAFDHLIVTAGSY   70 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence            4678899997 99999999998888999998887653              3444444333332   5789999888742


Q ss_pred             --------------------------ccHHHHHHhhccCCEEEEEcCCCC
Q 021300          259 --------------------------HPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       259 --------------------------~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                                                ...+.+++.++++|+++.+++...
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~  120 (223)
T 3uce_A           71 APAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLS  120 (223)
T ss_dssp             CCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             CCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhh
Confidence                                      012334455667899999987543

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=96.94  E-value=0.0036  Score=56.07  Aligned_cols=99  Identities=17%  Similarity=0.177  Sum_probs=71.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHC-CC-eEEEEeCChhhHHHHHHHcCC---cE-EecCCCHHHHHHHcCCccEEEEc
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAM-GV-KVTVISTSPSKKSEAIERLGA---DS-FLVSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~-g~-~vi~v~~~~~~~~~~~~~~ga---~~-~v~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      -.+.+|||.|+ |.+|...++.+... |. +|+++++++.+..++.+.+..   .. ..|-.+++.+.++..++|+||.+
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~   98 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHA   98 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEEC
Confidence            45789999997 99999999888877 97 999999998877666655532   22 23556777777777899999999


Q ss_pred             cCCccc-----------------HHHHHHhhccC--CEEEEEcCC
Q 021300          255 VSAVHP-----------------LMPLIGLLKSQ--GKLVLVGAP  280 (314)
Q Consensus       255 ~g~~~~-----------------~~~~~~~l~~~--G~~v~~G~~  280 (314)
                      ++....                 ...+++.+.+.  ++++.++..
T Consensus        99 Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~  143 (344)
T 2gn4_A           99 AALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTD  143 (344)
T ss_dssp             CCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCG
T ss_pred             CCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCC
Confidence            975321                 12344444433  589988764

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.93  E-value=0.01  Score=51.04  Aligned_cols=93  Identities=16%  Similarity=0.148  Sum_probs=62.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE-EecCCCHHHHHHH-------cCCccEEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAA-------MGTMDGIID  253 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~-~v~~~~~~~~~~~-------~~~~d~v~d  253 (314)
                      .+.++||.|+ |++|...++.+...|++|+++.+++++      .-.... ..|-.+++.+.++       .+++|++|+
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~   80 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN   80 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            3678999997 999999999999999999999988654      111222 2344555443332       247999999


Q ss_pred             ccCCcc-------------------------cHHHHHHhhcc--CCEEEEEcCCC
Q 021300          254 TVSAVH-------------------------PLMPLIGLLKS--QGKLVLVGAPE  281 (314)
Q Consensus       254 ~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~G~~~  281 (314)
                      ++|...                         ....+++.|++  .|+++.+++..
T Consensus        81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  135 (264)
T 2dtx_A           81 NAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQ  135 (264)
T ss_dssp             CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGG
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCch
Confidence            988421                         12334455533  58999998754

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=96.92  E-value=0.003  Score=58.11  Aligned_cols=94  Identities=17%  Similarity=0.174  Sum_probs=67.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHCC---CeEEEEeCChhhHHHHHHHcC------CcE-EecCCCHHHHHHHcC--CccEEEE
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMG---VKVTVISTSPSKKSEAIERLG------ADS-FLVSRDQDEMQAAMG--TMDGIID  253 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g---~~vi~v~~~~~~~~~~~~~~g------a~~-~v~~~~~~~~~~~~~--~~d~v~d  253 (314)
                      +|+|+|+|.+|..+++.+...|   .++++.+++.++.+++.++++      ... .+|-.+.+.+.++..  ++|+||+
T Consensus         3 kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVin   82 (405)
T 4ina_A            3 KVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVLN   82 (405)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEEE
Confidence            6899999999999999888877   389999999988888777664      222 235555666666554  4999999


Q ss_pred             ccCCcccHHHHHHhhccCCEEEEEcC
Q 021300          254 TVSAVHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       254 ~~g~~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      +++.......+..+++.+-.++.+..
T Consensus        83 ~ag~~~~~~v~~a~l~~g~~vvD~a~  108 (405)
T 4ina_A           83 IALPYQDLTIMEACLRTGVPYLDTAN  108 (405)
T ss_dssp             CSCGGGHHHHHHHHHHHTCCEEESSC
T ss_pred             CCCcccChHHHHHHHHhCCCEEEecC
Confidence            99865434445556666666666544

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=96.92  E-value=0.015  Score=50.35  Aligned_cols=76  Identities=11%  Similarity=0.189  Sum_probs=53.1

Q ss_pred             CCCCEEEEEcC-Ch--HHHHHHHHHHHCCCeEEEEeCCh--hhHHHHHHHcCCcEE--ecCCCHHHHHHH-------cCC
Q 021300          182 KPGMHVGVVGL-GG--LGHVAVKFAKAMGVKVTVISTSP--SKKSEAIERLGADSF--LVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~--vG~~a~~~a~~~g~~vi~v~~~~--~~~~~~~~~~ga~~~--v~~~~~~~~~~~-------~~~  247 (314)
                      -.+.++||.|+ |.  +|.+.++.+...|++|+++.++.  +..+++.++.+.-.+  .|-.+++.+.++       .+.
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  103 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG  103 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            45788999885 44  99999999999999999999887  555566555553222  244454433322       247


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus       104 id~li~nAg~  113 (280)
T 3nrc_A          104 LDAIVHSIAF  113 (280)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999984

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.92  E-value=0.0024  Score=57.56  Aligned_cols=89  Identities=19%  Similarity=0.256  Sum_probs=66.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc---
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~---  259 (314)
                      .|.++.|+|.|.+|...++.++.+|.+|+++.+....  +..++.|++.+   .+   +.++....|+|+-++....   
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~~~~~g~~~~---~~---l~ell~~aDiV~l~~Plt~~t~  230 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSK--ERARADGFAVA---ES---KDALFEQSDVLSVHLRLNDETR  230 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHH--HHHHHTTCEEC---SS---HHHHHHHCSEEEECCCCSTTTT
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCH--HHHHhcCceEe---CC---HHHHHhhCCEEEEeccCcHHHH
Confidence            5889999999999999999999999999998887532  33346676432   12   2233445899998875321   


Q ss_pred             --cHHHHHHhhccCCEEEEEcC
Q 021300          260 --PLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       260 --~~~~~~~~l~~~G~~v~~G~  279 (314)
                        .-...+..|+++..++.++.
T Consensus       231 ~li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          231 SIITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             TCBCHHHHTTSCTTCEEEECSC
T ss_pred             HhhCHHHHhhCCCCcEEEECCC
Confidence              13467888999999999986

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.91  E-value=0.005  Score=52.12  Aligned_cols=74  Identities=19%  Similarity=0.207  Sum_probs=54.1

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCcE---EecCCCHHHHHHH-------cCCc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADS---FLVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----ga~~---~v~~~~~~~~~~~-------~~~~  248 (314)
                      +.++||.|+ |.+|...+..+...|++|+++++++++.+++.+++    +.+.   ..|-.+++.+.++       .+++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            568899997 99999999999999999999999988776665554    3222   1244555443333       2479


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|.++|.
T Consensus        82 d~li~~Ag~   90 (250)
T 2cfc_A           82 DVLVNNAGI   90 (250)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=96.91  E-value=0.001  Score=57.81  Aligned_cols=102  Identities=20%  Similarity=0.132  Sum_probs=68.6

Q ss_pred             hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--cE-EecCCCHHHHHHHc-CCcc
Q 021300          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DS-FLVSRDQDEMQAAM-GTMD  249 (314)
Q Consensus       174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~~-~v~~~~~~~~~~~~-~~~d  249 (314)
                      +|...+.-..+.+++|+|+|++|.+++..+...|.+++++.|+.++.+++.++++.  .. ..+.   +   ++. +.+|
T Consensus       109 ~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~---~---~~~~~~~D  182 (272)
T 1p77_A          109 DLQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM---D---SIPLQTYD  182 (272)
T ss_dssp             HHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG---G---GCCCSCCS
T ss_pred             HHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeH---H---HhccCCCC
Confidence            34443322467899999999999999999998999999999999888888877653  21 1111   1   222 4799


Q ss_pred             EEEEccCCcccHH---HHHHhhccCCEEEEEcCCC
Q 021300          250 GIIDTVSAVHPLM---PLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       250 ~v~d~~g~~~~~~---~~~~~l~~~G~~v~~G~~~  281 (314)
                      ++|++++......   .....++++..++++...+
T Consensus       183 ivIn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~p  217 (272)
T 1p77_A          183 LVINATSAGLSGGTASVDAEILKLGSAFYDMQYAK  217 (272)
T ss_dssp             EEEECCCC-------CCCHHHHHHCSCEEESCCCT
T ss_pred             EEEECCCCCCCCCCCCCCHHHcCCCCEEEEeeCCC
Confidence            9999998653110   0123456777788886643

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=96.90  E-value=0.011  Score=50.12  Aligned_cols=75  Identities=25%  Similarity=0.344  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC-hhhHHHHHH---HcCCcEE---ecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIE---RLGADSF---LVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~-~~~~~~~~~---~~ga~~~---v~~~~~~~~~~~-------~~~  247 (314)
                      .+.++||.|+ |++|.+.++.+...|++|+++.+. .++.+++.+   ..+.+..   .|-.+++.+.++       .++
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3578899887 999999999999999999888774 344444433   3344332   244454433322       247


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++++++|.
T Consensus        83 id~lv~nAg~   92 (246)
T 3osu_A           83 LDVLVNNAGI   92 (246)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.90  E-value=0.0028  Score=53.32  Aligned_cols=97  Identities=14%  Similarity=0.147  Sum_probs=66.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHH---cCC--cEEecCCCH-HHHHHH--cCCccEE
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIER---LGA--DSFLVSRDQ-DEMQAA--MGTMDGI  251 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~---~ga--~~~v~~~~~-~~~~~~--~~~~d~v  251 (314)
                      ..++++||-+|+| .|..+..+++.. +.+++.++.++...+.+.+.   .|.  ..-+...+. +.+...  .+.||+|
T Consensus        52 ~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I  130 (233)
T 2gpy_A           52 MAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVL  130 (233)
T ss_dssp             HHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEE
T ss_pred             ccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEE
Confidence            4678899999987 588888999987 67999999998776555443   343  122223332 333344  4679999


Q ss_pred             EEccCC---cccHHHHHHhhccCCEEEEEc
Q 021300          252 IDTVSA---VHPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       252 ~d~~g~---~~~~~~~~~~l~~~G~~v~~G  278 (314)
                      +.....   ...+..+.+.|+++|+++..-
T Consensus       131 ~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  160 (233)
T 2gpy_A          131 FIDAAKGQYRRFFDMYSPMVRPGGLILSDN  160 (233)
T ss_dssp             EEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred             EECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence            876653   234677888999999998863

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.90  E-value=0.0022  Score=58.11  Aligned_cols=91  Identities=16%  Similarity=0.198  Sum_probs=67.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc--
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV--  258 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~--  258 (314)
                      -.|.+|.|+|.|.+|...++.++.+|++ |++++++....+ ..+++|+..+   .+   +.++....|+|+.++...  
T Consensus       162 l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~-~~~~~g~~~~---~~---l~ell~~aDvV~l~~P~t~~  234 (364)
T 2j6i_A          162 IEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKD-AEEKVGARRV---EN---IEELVAQADIVTVNAPLHAG  234 (364)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHH-HHHHTTEEEC---SS---HHHHHHTCSEEEECCCCSTT
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchh-HHHhcCcEec---CC---HHHHHhcCCEEEECCCCChH
Confidence            4788999999999999999999999997 999887765443 3356675431   12   233445789999988653  


Q ss_pred             --ccH-HHHHHhhccCCEEEEEcC
Q 021300          259 --HPL-MPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       259 --~~~-~~~~~~l~~~G~~v~~G~  279 (314)
                        ..+ ...+..|++++.++.++.
T Consensus       235 t~~li~~~~l~~mk~ga~lIn~ar  258 (364)
T 2j6i_A          235 TKGLINKELLSKFKKGAWLVNTAR  258 (364)
T ss_dssp             TTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             HHHHhCHHHHhhCCCCCEEEECCC
Confidence              122 457788999999999987

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.90  E-value=0.0035  Score=55.63  Aligned_cols=97  Identities=19%  Similarity=0.244  Sum_probs=64.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH----cC--CcEE-ecCCCHHHHHHHcC--CccEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LG--ADSF-LVSRDQDEMQAAMG--TMDGII  252 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~----~g--a~~~-v~~~~~~~~~~~~~--~~d~v~  252 (314)
                      .+.+|||.|+ |.+|...++.+...|++|+++++...+..+..+.    .+  ...+ .|-.+++.+.++..  ++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            4568999997 9999999999999999999998875543333222    23  2222 24455666666544  899999


Q ss_pred             EccCCcc-----------------cHHHHHHhhccC--CEEEEEcC
Q 021300          253 DTVSAVH-----------------PLMPLIGLLKSQ--GKLVLVGA  279 (314)
Q Consensus       253 d~~g~~~-----------------~~~~~~~~l~~~--G~~v~~G~  279 (314)
                      ++++...                 ....+++.++..  ++++.+++
T Consensus        84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS  129 (341)
T 3enk_A           84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS  129 (341)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             ECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence            9998531                 122344455433  58888875

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.89  E-value=0.00064  Score=56.01  Aligned_cols=136  Identities=17%  Similarity=0.155  Sum_probs=77.7

Q ss_pred             ccceEEe-ecCCceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC
Q 021300          137 GYSDIMV-ADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST  215 (314)
Q Consensus       137 ~~~~~~~-v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~  215 (314)
                      .|.+|.. .+....+.+++.+++..... +. .......+...  ++++++||-+|+|. |..+..+++.-..+++.++.
T Consensus        17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~-~~-~~~~~~~l~~~--~~~~~~vLDiG~G~-G~~~~~l~~~~~~~v~~vD~   91 (205)
T 3grz_A           17 EWEDYQPVFKDQEIIRLDPGLAFGTGNH-QT-TQLAMLGIERA--MVKPLTVADVGTGS-GILAIAAHKLGAKSVLATDI   91 (205)
T ss_dssp             TTCCCCCSSTTCEEEEESCC-----CCH-HH-HHHHHHHHHHH--CSSCCEEEEETCTT-SHHHHHHHHTTCSEEEEEES
T ss_pred             cccccccCCCCceeEEecCCcccCCCCC-cc-HHHHHHHHHHh--ccCCCEEEEECCCC-CHHHHHHHHCCCCEEEEEEC
Confidence            4566666 66677888888887766431 11 11111122222  47889999999876 77777777642348999999


Q ss_pred             ChhhHHHHHHH---cCCc--EEecCCCHHHHHHHcCCccEEEEccCCcc---cHHHHHHhhccCCEEEEEcCC
Q 021300          216 SPSKKSEAIER---LGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSAVH---PLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       216 ~~~~~~~~~~~---~ga~--~~v~~~~~~~~~~~~~~~d~v~d~~g~~~---~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      ++...+.+.+.   .+..  .++..+-.+   ...+.||+|+-...-..   .+..+.+.|+++|+++.....
T Consensus        92 s~~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~  161 (205)
T 3grz_A           92 SDESMTAAEENAALNGIYDIALQKTSLLA---DVDGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGID  161 (205)
T ss_dssp             CHHHHHHHHHHHHHTTCCCCEEEESSTTT---TCCSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEEEE
T ss_pred             CHHHHHHHHHHHHHcCCCceEEEeccccc---cCCCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEecC
Confidence            98766555433   3432  222221111   22357999987644322   244456678999999986543

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=96.89  E-value=0.0089  Score=53.00  Aligned_cols=75  Identities=21%  Similarity=0.286  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC---------ChhhHHHHHHH---cCCcEEecCCCHHHH----H---
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST---------SPSKKSEAIER---LGADSFLVSRDQDEM----Q---  242 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~---------~~~~~~~~~~~---~ga~~~v~~~~~~~~----~---  242 (314)
                      .|.++||.|+ |++|...++.+...|++|++.++         +.++.+++.++   .+.....|..+.+.+    .   
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence            5678999887 99999999999999999998643         44444444333   344445566554322    2   


Q ss_pred             HHcCCccEEEEccCC
Q 021300          243 AAMGTMDGIIDTVSA  257 (314)
Q Consensus       243 ~~~~~~d~v~d~~g~  257 (314)
                      +..+.+|++|+++|.
T Consensus        88 ~~~g~iD~lVnnAG~  102 (319)
T 1gz6_A           88 DTFGRIDVVVNNAGI  102 (319)
T ss_dssp             HHTSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence            223579999999983

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.89  E-value=0.0076  Score=51.91  Aligned_cols=76  Identities=20%  Similarity=0.276  Sum_probs=51.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh-hHHHH---HHHcCCcEEe---cCCCHHHHHHH-------cC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEA---IERLGADSFL---VSRDQDEMQAA-------MG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~---~~~~ga~~~v---~~~~~~~~~~~-------~~  246 (314)
                      -.|.++||.|+ |++|...++.+...|++|+++.+..+ ..+.+   .++.+.+..+   |-.+++.+.++       .+
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            35788999987 99999999999999999999998543 33333   2334443322   44444332222       24


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      ++|++|.++|.
T Consensus       107 ~id~li~nAg~  117 (271)
T 4iin_A          107 GLSYLVNNAGV  117 (271)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999984

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=96.88  E-value=0.007  Score=51.86  Aligned_cols=102  Identities=14%  Similarity=0.156  Sum_probs=67.0

Q ss_pred             CCCCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCChhh---HHHHHHHcCC-cE-EecCCCHHHHHHH-------c
Q 021300          181 DKPGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPSK---KSEAIERLGA-DS-FLVSRDQDEMQAA-------M  245 (314)
Q Consensus       181 ~~~g~~vlI~Ga---g~vG~~a~~~a~~~g~~vi~v~~~~~~---~~~~~~~~ga-~~-~v~~~~~~~~~~~-------~  245 (314)
                      ...+.++||.|+   +++|...++.+...|++|+++.++...   .+++.++.+. .. ..|-.+++.+.++       .
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   90 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW   90 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            367889999874   699999999999999999999887533   3344445553 22 2344555433332       2


Q ss_pred             CCccEEEEccCCcc------------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300          246 GTMDGIIDTVSAVH------------------------------PLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       246 ~~~d~v~d~~g~~~------------------------------~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      +.+|++|+++|...                              ..+.+++.|+++|+++.+++...
T Consensus        91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  157 (271)
T 3ek2_A           91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGA  157 (271)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGG
T ss_pred             CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccc
Confidence            47999999987421                              11223445556899999987543

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=96.88  E-value=0.0044  Score=51.83  Aligned_cols=99  Identities=19%  Similarity=0.078  Sum_probs=68.4

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--cEEecCCCHHHHHHHcCCccEEEEccCC
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~~~v~~~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      .++++++||-+|+|. |..+..+++.. .+++.++.++...+.+.+.+..  ..-+...+........+.||+|+....-
T Consensus        67 ~~~~~~~vLdiG~G~-G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~  144 (231)
T 1vbf_A           67 DLHKGQKVLEIGTGI-GYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWATA  144 (231)
T ss_dssp             TCCTTCEEEEECCTT-SHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSBB
T ss_pred             CCCCCCEEEEEcCCC-CHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECCcH
Confidence            368999999999876 88888888864 8999999998877666555432  1112222211101123579999987665


Q ss_pred             cccHHHHHHhhccCCEEEEEcCC
Q 021300          258 VHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       258 ~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      ......+.+.|+++|+++..-..
T Consensus       145 ~~~~~~~~~~L~pgG~l~~~~~~  167 (231)
T 1vbf_A          145 PTLLCKPYEQLKEGGIMILPIGV  167 (231)
T ss_dssp             SSCCHHHHHTEEEEEEEEEEECS
T ss_pred             HHHHHHHHHHcCCCcEEEEEEcC
Confidence            55567899999999998887443

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.88  E-value=0.0052  Score=52.04  Aligned_cols=75  Identities=17%  Similarity=0.168  Sum_probs=54.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~  248 (314)
                      .+.++||.|+ |++|...++.+...|++|+++.+++++.+++.+++   +.+..   .|-.+++.+.+.       .+.+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999987 99999999999999999999999987766655443   43322   244555433322       2369


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++|+++|.
T Consensus        84 d~li~~Ag~   92 (247)
T 3lyl_A           84 DILVNNAGI   92 (247)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.87  E-value=0.0078  Score=52.11  Aligned_cols=75  Identities=16%  Similarity=0.213  Sum_probs=54.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--cEE---ecCCCHHHHHHH-------cCCcc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DSF---LVSRDQDEMQAA-------MGTMD  249 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~~~---v~~~~~~~~~~~-------~~~~d  249 (314)
                      .+.++||.|+ |++|.+.++.+...|++|+++++++++.+++.+++..  +..   .|-.+++.+.++       .+++|
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  107 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD  107 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            4678999997 9999999999999999999999998777666655431  222   233444433322       24799


Q ss_pred             EEEEccCC
Q 021300          250 GIIDTVSA  257 (314)
Q Consensus       250 ~v~d~~g~  257 (314)
                      ++|+++|.
T Consensus       108 ~lvnnAg~  115 (276)
T 2b4q_A          108 ILVNNAGT  115 (276)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999983

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=96.86  E-value=0.0038  Score=53.11  Aligned_cols=99  Identities=20%  Similarity=0.174  Sum_probs=69.7

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCChhhHHHHHHHc----CCcEE-ecCCCHHHHHHHc-CCccEE
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERL----GADSF-LVSRDQDEMQAAM-GTMDGI  251 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~--g~~vi~v~~~~~~~~~~~~~~----ga~~~-v~~~~~~~~~~~~-~~~d~v  251 (314)
                      .++++++||-+|+|. |..+..+++..  +.+++.++.++...+.+.+.+    |.+.+ +...+.... ... +.||+|
T Consensus        93 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~-~~~~~~~D~v  170 (258)
T 2pwy_A           93 DLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA-ELEEAAYDGV  170 (258)
T ss_dssp             TCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC-CCCTTCEEEE
T ss_pred             CCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc-CCCCCCcCEE
Confidence            478999999999985 88888999885  569999999988765554433    53221 212221111 022 469999


Q ss_pred             EEccCCc-ccHHHHHHhhccCCEEEEEcCC
Q 021300          252 IDTVSAV-HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       252 ~d~~g~~-~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      +...... ..+..+.+.|+++|+++.+...
T Consensus       171 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~  200 (258)
T 2pwy_A          171 ALDLMEPWKVLEKAALALKPDRFLVAYLPN  200 (258)
T ss_dssp             EEESSCGGGGHHHHHHHEEEEEEEEEEESC
T ss_pred             EECCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence            9877655 5688899999999999988653

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=96.85  E-value=0.0088  Score=51.00  Aligned_cols=75  Identities=23%  Similarity=0.334  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH----HcCCcEE---ecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE----RLGADSF---LVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~----~~ga~~~---v~~~~~~~~~~~-------~~~  247 (314)
                      .+.++||.|+ |.+|...++.+...|++|+++.++.++..+..+    +.+.+..   .|-.+++.+.++       .+.
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   92 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   92 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            4678999997 999999999999999999999986554433322    3343322   244555433322       246


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|.++|.
T Consensus        93 id~li~~Ag~  102 (265)
T 1h5q_A           93 ISGLIANAGV  102 (265)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999874

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=96.84  E-value=0.0083  Score=53.18  Aligned_cols=76  Identities=22%  Similarity=0.333  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC----------hhhHHHHHHH---cCCcEEe---cCCCHHHHHHH
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS----------PSKKSEAIER---LGADSFL---VSRDQDEMQAA  244 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~----------~~~~~~~~~~---~ga~~~v---~~~~~~~~~~~  244 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|++++++          .++.+++.++   .+.+..+   |-.+++.+.++
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            35788999987 999999999999999999999876          4444444333   3443333   33444333322


Q ss_pred             -------cCCccEEEEccCC
Q 021300          245 -------MGTMDGIIDTVSA  257 (314)
Q Consensus       245 -------~~~~d~v~d~~g~  257 (314)
                             .+.+|++|+++|.
T Consensus       105 ~~~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCC
Confidence                   2479999999984

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.84  E-value=0.015  Score=48.99  Aligned_cols=71  Identities=21%  Similarity=0.315  Sum_probs=49.5

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCC--H-HHHH---HHcCCccEEEEcc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRD--Q-DEMQ---AAMGTMDGIIDTV  255 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~--~-~~~~---~~~~~~d~v~d~~  255 (314)
                      +.++||.|+ |++|.+.++.+...|++|+++.+++++   +.++++...+ .|-.+  . ..+.   +..+++|+++++.
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~A   78 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAA   78 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHHTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEEECC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhhCcEEEecCCchHHHHHHHHHHHHHcCCCCEEEECC
Confidence            468999997 999999999999999999999998765   3344454322 12222  1 1222   2235799999998


Q ss_pred             CC
Q 021300          256 SA  257 (314)
Q Consensus       256 g~  257 (314)
                      |.
T Consensus        79 g~   80 (239)
T 2ekp_A           79 AV   80 (239)
T ss_dssp             CC
T ss_pred             CC
Confidence            74

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.84  E-value=0.0046  Score=52.54  Aligned_cols=75  Identities=23%  Similarity=0.383  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC-hhhHHHHHHHc---CCcEE---ecCCCHHHHHHHc-------CC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIERL---GADSF---LVSRDQDEMQAAM-------GT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~-~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~~-------~~  247 (314)
                      .+.++||.|+ |.+|...++.+...|++|+++.++ +++.+++.+++   +.+..   .|-.+++.+.++.       ++
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG   85 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 999999999999999999999998 66655554433   43221   2445554443332       37


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|+++|.
T Consensus        86 id~vi~~Ag~   95 (258)
T 3afn_B           86 IDVLINNAGG   95 (258)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.83  E-value=0.0084  Score=50.49  Aligned_cols=73  Identities=23%  Similarity=0.153  Sum_probs=55.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHC--CCeEEEEeCChhhHHHHHHHcCCcE-EecCCCHHHHHHHcCCccEEEEccCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~--g~~vi~v~~~~~~~~~~~~~~ga~~-~v~~~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      .+.++||.|+ |.+|...++.+...  |.+|+++++++++..++  ..+... ..|..+++.+.++..++|+||.++|.
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~   79 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--GGEADVFIGDITDADSINPAFQGIDALVILTSA   79 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc--CCCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence            4678999997 99999999999888  78999999987655333  112333 23556677777777889999999874

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=96.83  E-value=0.012  Score=50.63  Aligned_cols=76  Identities=18%  Similarity=0.309  Sum_probs=51.5

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCChhhHHHHHHH---cCCcEE---ecCCCHHHHHHH-------cC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v-~~~~~~~~~~~~~---~ga~~~---v~~~~~~~~~~~-------~~  246 (314)
                      ..+.++||.|+ |++|.+.++.+...|++|+++ .++.+..+++.++   .+.+..   .|-.+++.+.++       .+
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            45678999987 999999999999999999876 5665555444333   343322   244444433322       24


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      .+|++|.++|.
T Consensus       104 ~id~li~nAg~  114 (272)
T 4e3z_A          104 RLDGLVNNAGI  114 (272)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=96.83  E-value=0.0036  Score=53.52  Aligned_cols=72  Identities=22%  Similarity=0.310  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHH------cCCccEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA------MGTMDGII  252 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~------~~~~d~v~  252 (314)
                      .+.++||.|+ +++|.+.++.+...|++|+++.+..+   ++.++++....   .|-.+++.+.++      .+.+|+++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv   84 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE---DVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVV   84 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCH---HHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchH---HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEE
Confidence            4678999997 99999999998889999999988654   33455664332   244555433332      24899999


Q ss_pred             EccCC
Q 021300          253 DTVSA  257 (314)
Q Consensus       253 d~~g~  257 (314)
                      +++|.
T Consensus        85 ~nAg~   89 (257)
T 3tl3_A           85 NCAGT   89 (257)
T ss_dssp             ECGGG
T ss_pred             ECCCC
Confidence            99983

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=96.83  E-value=0.0025  Score=54.22  Aligned_cols=101  Identities=15%  Similarity=0.206  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCChhhHHHHHHH---cCCcEE---ecCCCHHHHHHH----c----
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIER---LGADSF---LVSRDQDEMQAA----M----  245 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v-~~~~~~~~~~~~~---~ga~~~---v~~~~~~~~~~~----~----  245 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|+++ .++.++.+++.++   .+....   .|-.+.+.+...    .    
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            35788999987 999999999999999999886 4555544444333   343322   233444322221    1    


Q ss_pred             -----CCccEEEEccCCcc-------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300          246 -----GTMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       246 -----~~~d~v~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                           +.+|++|+++|...                         ..+.+++.|+++|+++.+++...
T Consensus        85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~  151 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  151 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred             ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhh
Confidence                 24999999988420                         12223334556789999987543

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.83  E-value=0.0077  Score=52.58  Aligned_cols=74  Identities=20%  Similarity=0.291  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCcEE---ecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADSF---LVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----ga~~~---v~~~~~~~~~~~-------~~~  247 (314)
                      .|.++||.|+ |++|...+..+...|++|+++.+++++.+++.+++    +....   .|-.+++.+.++       .+.
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  104 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            5688999997 99999999999999999999999987766555443    43322   244454433322       246


Q ss_pred             ccEEEEccC
Q 021300          248 MDGIIDTVS  256 (314)
Q Consensus       248 ~d~v~d~~g  256 (314)
                      +|++|+++|
T Consensus       105 id~li~~Ag  113 (302)
T 1w6u_A          105 PNIVINNAA  113 (302)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999998

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.82  E-value=0.011  Score=54.35  Aligned_cols=96  Identities=18%  Similarity=0.333  Sum_probs=70.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHH-cCCccEEEEccCCccc
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVHP  260 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v-~~~~~~~~~~~-~~~~d~v~d~~g~~~~  260 (314)
                      .+++|+|+|.|.+|..+++.++..|..+++++.++++.+++ ++.|...++ |..+++.+.+. ...+|+++-++++...
T Consensus         3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~-~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~   81 (413)
T 3l9w_A            3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETL-RKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQT   81 (413)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHH-HHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH-HhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHH
Confidence            34679999999999999999999999999999999988666 467875443 55566766655 4589999999987653


Q ss_pred             HHHHH---HhhccCCEEEEEcC
Q 021300          261 LMPLI---GLLKSQGKLVLVGA  279 (314)
Q Consensus       261 ~~~~~---~~l~~~G~~v~~G~  279 (314)
                      ...+.   +.+.+.-+++.-..
T Consensus        82 n~~i~~~ar~~~p~~~Iiara~  103 (413)
T 3l9w_A           82 NLQLTEMVKEHFPHLQIIARAR  103 (413)
T ss_dssp             HHHHHHHHHHHCTTCEEEEEES
T ss_pred             HHHHHHHHHHhCCCCeEEEEEC
Confidence            33333   33445556665544

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.81  E-value=0.0039  Score=55.04  Aligned_cols=96  Identities=15%  Similarity=0.227  Sum_probs=66.7

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc--EEecCCCHHHHHHHcCCccEEEEc
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD--SFLVSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~--~~v~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      .++++++||-+|+|. |..+..+++..|++++.++.+++..+.+.+.+   |..  .-+...+..   ...+.||+|+..
T Consensus        87 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~---~~~~~fD~v~~~  162 (318)
T 2fk8_A           87 DLKPGMTLLDIGCGW-GTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWE---DFAEPVDRIVSI  162 (318)
T ss_dssp             CCCTTCEEEEESCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGG---GCCCCCSEEEEE
T ss_pred             CCCCcCEEEEEcccc-hHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChH---HCCCCcCEEEEe
Confidence            468999999999976 88888888877899999999988776554443   321  112222221   123679999876


Q ss_pred             -----cCC---cccHHHHHHhhccCCEEEEEcC
Q 021300          255 -----VSA---VHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       255 -----~g~---~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                           .+.   ...+..+.+.|+++|++++.-.
T Consensus       163 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  195 (318)
T 2fk8_A          163 EAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS  195 (318)
T ss_dssp             SCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             ChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence                 322   2246778889999999988654

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=96.80  E-value=0.004  Score=56.84  Aligned_cols=91  Identities=16%  Similarity=0.165  Sum_probs=68.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc---
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---  258 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---  258 (314)
                      -.|.++.|+|.|.+|...++.++.+|.+|+++.+...... ..+++|+...   .+   +.++....|+|+.++...   
T Consensus       189 l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~-~~~~~G~~~~---~~---l~ell~~aDvV~l~~Plt~~t  261 (393)
T 2nac_A          189 LEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPES-VEKELNLTWH---AT---REDMYPVCDVVTLNCPLHPET  261 (393)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHH-HHHHHTCEEC---SS---HHHHGGGCSEEEECSCCCTTT
T ss_pred             CCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchh-hHhhcCceec---CC---HHHHHhcCCEEEEecCCchHH
Confidence            3688999999999999999999999999999988764443 3355676432   12   234566799999987632   


Q ss_pred             -ccH-HHHHHhhccCCEEEEEcC
Q 021300          259 -HPL-MPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       259 -~~~-~~~~~~l~~~G~~v~~G~  279 (314)
                       ..+ ...+..|+++..++.++.
T Consensus       262 ~~li~~~~l~~mk~gailIN~aR  284 (393)
T 2nac_A          262 EHMINDETLKLFKRGAYIVNTAR  284 (393)
T ss_dssp             TTCBSHHHHTTSCTTEEEEECSC
T ss_pred             HHHhhHHHHhhCCCCCEEEECCC
Confidence             122 567788999999999986

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.79  E-value=0.0035  Score=53.46  Aligned_cols=99  Identities=17%  Similarity=0.141  Sum_probs=67.0

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--cEEecCCCHHHHHHHcCCccEEEEccCC
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~~~v~~~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      .++++.+||-+|+| .|..+..+++..+++++.++.++...+.+.+....  ..-+...+........+.||+|+....-
T Consensus        52 ~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l  130 (266)
T 3ujc_A           52 ELNENSKVLDIGSG-LGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAI  130 (266)
T ss_dssp             CCCTTCEEEEETCT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCG
T ss_pred             CCCCCCEEEEECCC-CCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHH
Confidence            36899999999987 57888888887789999999999887666554432  1111111211111113479999976432


Q ss_pred             cc--------cHHHHHHhhccCCEEEEEcC
Q 021300          258 VH--------PLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       258 ~~--------~~~~~~~~l~~~G~~v~~G~  279 (314)
                      .+        .+..+.+.|+++|++++...
T Consensus       131 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  160 (266)
T 3ujc_A          131 LALSLENKNKLFQKCYKWLKPTGTLLITDY  160 (266)
T ss_dssp             GGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             HhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence            22        36778889999999988754

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=96.78  E-value=0.0029  Score=51.77  Aligned_cols=59  Identities=17%  Similarity=0.295  Sum_probs=44.4

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHc---CCccEEEEccC
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM---GTMDGIIDTVS  256 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~---~~~d~v~d~~g  256 (314)
                      ++||.|+ |.+|...++.+. .|++|+++.++++           ....|-.+++.+.++.   +.+|++|.++|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQVGKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHHCCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHhCCCCEEEECCC
Confidence            7999997 999999999888 8999999988764           1223555555444332   46899999987

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.78  E-value=0.011  Score=51.58  Aligned_cols=92  Identities=16%  Similarity=0.191  Sum_probs=64.8

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh-------hhHHHHH--HHcCCcEE-ecCCCHHHHHHHcCCccEEE
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-------SKKSEAI--ERLGADSF-LVSRDQDEMQAAMGTMDGII  252 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~-------~~~~~~~--~~~ga~~~-v~~~~~~~~~~~~~~~d~v~  252 (314)
                      +.+|||.|+ |.+|...++.+...|.+|+++++++       ++...+.  +..++..+ .|..+++.+.++..++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   81 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence            457999998 9999999998888899999999986       4332221  23455433 36677777778778999999


Q ss_pred             EccCCc--ccHHHHHHhhccC---CEEE
Q 021300          253 DTVSAV--HPLMPLIGLLKSQ---GKLV  275 (314)
Q Consensus       253 d~~g~~--~~~~~~~~~l~~~---G~~v  275 (314)
                      .+++..  .....+++.++..   .+++
T Consensus        82 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           82 CAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             ECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             ECCcccccccHHHHHHHHHhcCCceEEe
Confidence            999853  2345566666543   4666

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.76  E-value=0.0042  Score=53.85  Aligned_cols=75  Identities=19%  Similarity=0.305  Sum_probs=54.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CC---cEE---ecCCCHHHHHHH-------c
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA---DSF---LVSRDQDEMQAA-------M  245 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga---~~~---v~~~~~~~~~~~-------~  245 (314)
                      .+.++||.|+ |++|...++.+...|++|+++.+++++.+++.+++   +.   ...   .|-.+++.+.++       .
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4678999887 99999999999999999999999987766665443   22   221   244555433322       2


Q ss_pred             CCccEEEEccCC
Q 021300          246 GTMDGIIDTVSA  257 (314)
Q Consensus       246 ~~~d~v~d~~g~  257 (314)
                      +.+|++|+++|.
T Consensus        85 g~iD~lv~nAg~   96 (280)
T 1xkq_A           85 GKIDVLVNNAGA   96 (280)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.76  E-value=0.005  Score=53.14  Aligned_cols=72  Identities=19%  Similarity=0.265  Sum_probs=50.7

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE-EecCCCHHHHHHH-------cCCccEE
Q 021300          181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAA-------MGTMDGI  251 (314)
Q Consensus       181 ~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~-~v~~~~~~~~~~~-------~~~~d~v  251 (314)
                      ...|.++||.|+ +++|.+.++.+...|++|+++.++.+...    . .... ..|-.+++.+.++       .+.+|++
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   85 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----N-VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDIL   85 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----T-SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----C-ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            367899999987 99999999999999999999998865331    1 1222 2355555433332       3479999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      |+++|.
T Consensus        86 v~nAg~   91 (269)
T 3vtz_A           86 VNNAGI   91 (269)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999984

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.75  E-value=0.0065  Score=51.74  Aligned_cols=101  Identities=17%  Similarity=0.247  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEe-CChhhHHHHH---HHcCCcEE---ecCCCHHHHHHH-------cC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAI---ERLGADSF---LVSRDQDEMQAA-------MG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~-~~~~~~~~~~---~~~ga~~~---v~~~~~~~~~~~-------~~  246 (314)
                      .++.++||.|+ |++|...++.+...|++|+++. ++.++..+..   ++.+.+..   .|-.+.+.+.+.       .+
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   90 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG   90 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            56788999887 9999999999999999998887 4444433332   33343322   244444433322       34


Q ss_pred             CccEEEEccCCcc-------------------------cHHHHHHhhc--cCCEEEEEcCCCC
Q 021300          247 TMDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLVGAPEK  282 (314)
Q Consensus       247 ~~d~v~d~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~G~~~~  282 (314)
                      .+|++|+++|...                         ..+.+++.|+  ..|+++.+++...
T Consensus        91 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  153 (256)
T 3ezl_A           91 EIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNG  153 (256)
T ss_dssp             CEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCG
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhh
Confidence            7999999988321                         1223344443  3489999988654

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=96.75  E-value=0.011  Score=50.90  Aligned_cols=76  Identities=21%  Similarity=0.247  Sum_probs=50.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEe-CChhhHHHHHHH---cCCcE---EecCCCHHHHHHH-------cC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~-~~~~~~~~~~~~---~ga~~---~v~~~~~~~~~~~-------~~  246 (314)
                      ..+.++||.|+ +++|.+.++.+...|++|+++. +..+...+..++   .+.+.   ..|-.+++.+.++       .+
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35678899887 9999999999999999999988 554444333322   23221   1344555433322       24


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      .+|++|+++|.
T Consensus       103 ~id~li~nAg~  113 (269)
T 3gk3_A          103 KVDVLINNAGI  113 (269)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999883

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.73  E-value=0.01  Score=51.92  Aligned_cols=74  Identities=22%  Similarity=0.308  Sum_probs=53.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc--------CCcEE---ecCCCHHHHHHH------
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--------GADSF---LVSRDQDEMQAA------  244 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~--------ga~~~---v~~~~~~~~~~~------  244 (314)
                      .+.++||.|+ |++|...++.+...|++|+++.++.++.+++.+++        +....   .|-.+++.+.++      
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   96 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   96 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence            4688999997 99999999999999999999999987766554443        32221   244455433332      


Q ss_pred             -cCCccEEEEccC
Q 021300          245 -MGTMDGIIDTVS  256 (314)
Q Consensus       245 -~~~~d~v~d~~g  256 (314)
                       .+.+|++|+++|
T Consensus        97 ~~g~id~li~~Ag  109 (303)
T 1yxm_A           97 TFGKINFLVNNGG  109 (303)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence             247999999998

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.73  E-value=0.0031  Score=53.61  Aligned_cols=70  Identities=21%  Similarity=0.238  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHH-------cCCccEEEEc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA-------MGTMDGIIDT  254 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~-------~~~~d~v~d~  254 (314)
                      .+.++||.|+ |++|...++.+...|++|+++.+++++.+++.   +  ...|-.+++.+.++       .+.+|++|++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~--~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   88 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF---G--VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   88 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE---E--EECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc---C--eeccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4678999987 99999999999999999999998865432221   1  23455555443332       2479999999


Q ss_pred             cCC
Q 021300          255 VSA  257 (314)
Q Consensus       255 ~g~  257 (314)
                      .|.
T Consensus        89 Ag~   91 (247)
T 1uzm_A           89 AGL   91 (247)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            884

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.73  E-value=0.0021  Score=55.08  Aligned_cols=126  Identities=21%  Similarity=0.226  Sum_probs=73.4

Q ss_pred             CceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH
Q 021300          147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER  226 (314)
Q Consensus       147 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~  226 (314)
                      ...+.++.+..+..... +.. ......+...  ++++++||-+|+|. |..++.+++ .|++++.++.++...+.+.+.
T Consensus        88 ~~~~~l~p~~~fgtg~~-~tt-~~~~~~l~~~--~~~~~~VLDiGcG~-G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n  161 (254)
T 2nxc_A           88 EIPLVIEPGMAFGTGHH-ETT-RLALKALARH--LRPGDKVLDLGTGS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEAN  161 (254)
T ss_dssp             SEEEECCCC-----CCS-HHH-HHHHHHHHHH--CCTTCEEEEETCTT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHHH
T ss_pred             ceEEEECCCccccCCCC-HHH-HHHHHHHHHh--cCCCCEEEEecCCC-cHHHHHHHH-hCCeEEEEECCHHHHHHHHHH
Confidence            44566666665544321 110 1112233333  57899999999876 777777766 467999999998876555432


Q ss_pred             ---cCCc-EEecCCCHHHHHHH-cCCccEEEEccCC---cccHHHHHHhhccCCEEEEEcCCC
Q 021300          227 ---LGAD-SFLVSRDQDEMQAA-MGTMDGIIDTVSA---VHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       227 ---~ga~-~~v~~~~~~~~~~~-~~~~d~v~d~~g~---~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                         .+.+ .++ ..+.  .... .+.||+|+.+.-.   ...+..+.+.|+++|++++.+...
T Consensus       162 ~~~~~~~v~~~-~~d~--~~~~~~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~~  221 (254)
T 2nxc_A          162 AKRNGVRPRFL-EGSL--EAALPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGILK  221 (254)
T ss_dssp             HHHTTCCCEEE-ESCH--HHHGGGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEEG
T ss_pred             HHHcCCcEEEE-ECCh--hhcCcCCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEeecc
Confidence               3432 222 2222  1123 4579999975422   124667788999999999987643

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=96.72  E-value=0.011  Score=50.44  Aligned_cols=75  Identities=16%  Similarity=0.103  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHH---CCCeEEEEeCChhhHHHHHHHc-----CCcEE---ecCCCHHHHH----HHc-
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKA---MGVKVTVISTSPSKKSEAIERL-----GADSF---LVSRDQDEMQ----AAM-  245 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~---~g~~vi~v~~~~~~~~~~~~~~-----ga~~~---v~~~~~~~~~----~~~-  245 (314)
                      .+.++||.|+ |++|.+.++.+..   .|++|+++.+++++.+++.+++     +.+..   .|-.+++.+.    +.. 
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            3567888887 9999999888887   7999999999988776665554     33221   2444544332    222 


Q ss_pred             ----CCcc--EEEEccCC
Q 021300          246 ----GTMD--GIIDTVSA  257 (314)
Q Consensus       246 ----~~~d--~v~d~~g~  257 (314)
                          +.+|  ++|+++|.
T Consensus        85 ~~~~g~~d~~~lvnnAg~  102 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAAT  102 (259)
T ss_dssp             SCCCTTCCEEEEEECCCC
T ss_pred             ccccccCCccEEEECCcc
Confidence                2578  99999873

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.71  E-value=0.011  Score=51.17  Aligned_cols=99  Identities=16%  Similarity=0.123  Sum_probs=69.4

Q ss_pred             hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEE
Q 021300          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII  252 (314)
Q Consensus       174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~  252 (314)
                      ++...+ ...+.+++|+|+|+.|.+++..+...|+ +++++.|+.++.++++++++.+ +.+  ...     ...+|+||
T Consensus       110 ~l~~~~-~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~-~~~--~~~-----~~~~DivI  180 (271)
T 1npy_A          110 LIEKYH-LNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-YIN--SLE-----NQQADILV  180 (271)
T ss_dssp             HHHHTT-CCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-EES--CCT-----TCCCSEEE
T ss_pred             HHHHhC-CCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-cch--hhh-----cccCCEEE
Confidence            344333 3457889999999999999999999997 8999999998888898888762 211  111     24699999


Q ss_pred             EccCCccc-------HHHHHHhhccCCEEEEEcCCC
Q 021300          253 DTVSAVHP-------LMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       253 d~~g~~~~-------~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      ++++....       .......++++..++++-..+
T Consensus       181 naTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY~P  216 (271)
T 1npy_A          181 NVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMP  216 (271)
T ss_dssp             ECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSS
T ss_pred             ECCCCCccCccccCCCCCCHHHcCCCCEEEEeecCC
Confidence            99975421       111234567778888886533

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=96.71  E-value=0.015  Score=50.75  Aligned_cols=91  Identities=21%  Similarity=0.313  Sum_probs=64.1

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh-----hhHHHHH--HHcCCcEE-ecCCCHHHHHHHcCCccEEEEcc
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-----SKKSEAI--ERLGADSF-LVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~-----~~~~~~~--~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      .+|||.|+ |.+|...++.+...|.+|++++++.     ++...+.  +..+...+ .|..+++.+.++..++|+||.++
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a   84 (313)
T 1qyd_A            5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISAL   84 (313)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEECC
Confidence            57999998 9999999999988999999999983     3332221  12344332 35667777778778999999998


Q ss_pred             CCc------ccHHHHHHhhccCC---EEE
Q 021300          256 SAV------HPLMPLIGLLKSQG---KLV  275 (314)
Q Consensus       256 g~~------~~~~~~~~~l~~~G---~~v  275 (314)
                      +..      .....+++.++..|   +++
T Consensus        85 ~~~~~~~~~~~~~~l~~aa~~~g~v~~~v  113 (313)
T 1qyd_A           85 AGGVLSHHILEQLKLVEAIKEAGNIKRFL  113 (313)
T ss_dssp             CCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred             ccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence            743      23455666665544   676

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=96.69  E-value=0.011  Score=52.58  Aligned_cols=91  Identities=15%  Similarity=0.221  Sum_probs=64.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHHcCCccEEEEccCCcc
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~g~~~  259 (314)
                      ..+.+|||.|+ |.+|...++.+...|.+|+++++.+..       .+...+ .|-.+++.+.++..++|+||.+++...
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~   89 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMS   89 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCCC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHhCCCEEEECCcccC
Confidence            56788999998 999999999999999999999988754       234333 355667777777779999999987421


Q ss_pred             ---------------cHHHHHHhhccC--CEEEEEcC
Q 021300          260 ---------------PLMPLIGLLKSQ--GKLVLVGA  279 (314)
Q Consensus       260 ---------------~~~~~~~~l~~~--G~~v~~G~  279 (314)
                                     ....+++.++..  +++|.+++
T Consensus        90 ~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS  126 (347)
T 4id9_A           90 WAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS  126 (347)
T ss_dssp             SSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence                           123345555443  48888876

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.68  E-value=0.001  Score=57.99  Aligned_cols=102  Identities=14%  Similarity=0.019  Sum_probs=65.9

Q ss_pred             hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEE
Q 021300          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII  252 (314)
Q Consensus       174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~  252 (314)
                      +++....--.|.+++|+|+|++|.+++..+...|+ +++++.|+.++.+++++.  .. ..   ..+...+....+|+||
T Consensus       107 ~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~--~~-~~---~~~~~~~~~~~aDiVI  180 (277)
T 3don_A          107 GLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN--IN-KI---NLSHAESHLDEFDIII  180 (277)
T ss_dssp             HHHHHSTTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSC--CE-EE---CHHHHHHTGGGCSEEE
T ss_pred             HHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHh--cc-cc---cHhhHHHHhcCCCEEE
Confidence            44444322467899999999999999999999998 899999998776554321  11 11   2233444456799999


Q ss_pred             EccCCcccHH----HHHHhhccCCEEEEEcCCC
Q 021300          253 DTVSAVHPLM----PLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       253 d~~g~~~~~~----~~~~~l~~~G~~v~~G~~~  281 (314)
                      ++++....-.    .....++++..++++...+
T Consensus       181 naTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P  213 (277)
T 3don_A          181 NTTPAGMNGNTDSVISLNRLASHTLVSDIVYNP  213 (277)
T ss_dssp             ECCC-------CCSSCCTTCCSSCEEEESCCSS
T ss_pred             ECccCCCCCCCcCCCCHHHcCCCCEEEEecCCC
Confidence            9986431000    0234567778888886543

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=96.67  E-value=0.0024  Score=53.47  Aligned_cols=97  Identities=18%  Similarity=0.182  Sum_probs=67.9

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHH-cCCccEEEEccCCcc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA-MGTMDGIIDTVSAVH  259 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~-~~~~d~v~d~~g~~~  259 (314)
                      ++++.+||-+|+|. |..+..+++. +++++.++.++...+.+.+....-.++..+-.+.+... .+.||+|+....-..
T Consensus        46 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~~~~  123 (226)
T 3m33_A           46 LTPQTRVLEAGCGH-GPDAARFGPQ-AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRRGPTS  123 (226)
T ss_dssp             CCTTCEEEEESCTT-SHHHHHHGGG-SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEESCCSG
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHc-CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCCCHHH
Confidence            37889999999865 6677777776 88999999999887666555432232222111111112 357999998766666


Q ss_pred             cHHHHHHhhccCCEEEEEcC
Q 021300          260 PLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       260 ~~~~~~~~l~~~G~~v~~G~  279 (314)
                      .+..+.+.|+++|+++..+.
T Consensus       124 ~l~~~~~~LkpgG~l~~~~~  143 (226)
T 3m33_A          124 VILRLPELAAPDAHFLYVGP  143 (226)
T ss_dssp             GGGGHHHHEEEEEEEEEEES
T ss_pred             HHHHHHHHcCCCcEEEEeCC
Confidence            78899999999999996654

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.66  E-value=0.003  Score=51.46  Aligned_cols=99  Identities=16%  Similarity=0.162  Sum_probs=66.3

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHH---cCC--cEEecCCCHHHHH-HHcCCccEEE
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIER---LGA--DSFLVSRDQDEMQ-AAMGTMDGII  252 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~~---~ga--~~~v~~~~~~~~~-~~~~~~d~v~  252 (314)
                      ++++++||-+|+|. |..+..+++..+  .+++.++.++...+.+.+.   .|.  ..-+...+...+. ...+.||+|+
T Consensus        20 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~   98 (197)
T 3eey_A           20 VKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM   98 (197)
T ss_dssp             CCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred             CCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence            68899999999876 778888888753  5999999998766554333   332  2222333322222 2235799998


Q ss_pred             EccCC---------------cccHHHHHHhhccCCEEEEEcCC
Q 021300          253 DTVSA---------------VHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       253 d~~g~---------------~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      -..+-               ...+..+.+.|+++|+++.+...
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~  141 (197)
T 3eey_A           99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY  141 (197)
T ss_dssp             EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred             EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence            66532               13578889999999999887543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.66  E-value=0.011  Score=57.10  Aligned_cols=98  Identities=18%  Similarity=0.221  Sum_probs=64.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh---------hhHHHHHH---HcCCcEEecCCCHH----HHH---
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP---------SKKSEAIE---RLGADSFLVSRDQD----EMQ---  242 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~---------~~~~~~~~---~~ga~~~v~~~~~~----~~~---  242 (314)
                      .|.++||.|+ +++|.+.++.+...|++|++.++..         ++.+++.+   ..|...+.|..+.+    .+.   
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            4678888887 9999999999999999999887643         33333333   33544555555542    222   


Q ss_pred             HHcCCccEEEEccCCc-------------------------ccHHHHHHhhc--cCCEEEEEcCC
Q 021300          243 AAMGTMDGIIDTVSAV-------------------------HPLMPLIGLLK--SQGKLVLVGAP  280 (314)
Q Consensus       243 ~~~~~~d~v~d~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~G~~  280 (314)
                      +..+.+|+++++.|..                         ...+.++..|+  .+|+||.+++.
T Consensus        87 ~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~  151 (604)
T 2et6_A           87 KNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSP  151 (604)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCH
Confidence            2235799999999832                         12344566664  35899999874

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.65  E-value=0.0054  Score=51.49  Aligned_cols=96  Identities=17%  Similarity=0.146  Sum_probs=65.2

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCC--cEEecCCC---HHHHHHHcCCccEEEEc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGA--DSFLVSRD---QDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~ga--~~~v~~~~---~~~~~~~~~~~d~v~d~  254 (314)
                      ++++++||-+|+|. |..+..+++..| .+++.++.+++..+.+.+....  ...+...+   +.......+.||+|+..
T Consensus        72 ~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~  150 (230)
T 1fbn_A           72 IKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYED  150 (230)
T ss_dssp             CCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEEC
T ss_pred             CCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEEe
Confidence            67899999999976 888888998876 6899999998877665444321  11111111   11101112579999976


Q ss_pred             cCCc----ccHHHHHHhhccCCEEEEE
Q 021300          255 VSAV----HPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       255 ~g~~----~~~~~~~~~l~~~G~~v~~  277 (314)
                      ....    ..+..+.+.|+++|++++.
T Consensus       151 ~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          151 VAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             CCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            5543    2377788899999999886

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=96.65  E-value=0.016  Score=50.63  Aligned_cols=90  Identities=14%  Similarity=0.183  Sum_probs=63.0

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHHcCCccEEEEccCCcc---
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~g~~~---  259 (314)
                      .+|||.|+ |.+|...++.+...|.+|+++++++.... + +  +...+ .|-. ++.+.++..++|+||.+++...   
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~-~--~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~~   77 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I-N--DYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQG   77 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSSS
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C-C--ceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCCC
Confidence            57999997 99999999999999999999999854432 2 2  44433 2445 7777777789999999987532   


Q ss_pred             ----------cHHHHHHhhccC--CEEEEEcC
Q 021300          260 ----------PLMPLIGLLKSQ--GKLVLVGA  279 (314)
Q Consensus       260 ----------~~~~~~~~l~~~--G~~v~~G~  279 (314)
                                ....+++.++..  .+++.+++
T Consensus        78 ~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS  109 (311)
T 3m2p_A           78 KISEFHDNEILTQNLYDACYENNISNIVYAST  109 (311)
T ss_dssp             CGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence                      124455555543  46888765

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=96.65  E-value=0.0047  Score=52.93  Aligned_cols=95  Identities=18%  Similarity=0.121  Sum_probs=61.7

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC---------------------cEEecCCCHH
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA---------------------DSFLVSRDQD  239 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga---------------------~~~v~~~~~~  239 (314)
                      ..++.+||.+|+|. |..+..+++. |++|+.++.++...+.+.++.+.                     +.-+...+..
T Consensus        66 ~~~~~~vLD~GCG~-G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~  143 (252)
T 2gb4_A           66 GQSGLRVFFPLCGK-AIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF  143 (252)
T ss_dssp             TCCSCEEEETTCTT-CTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred             CCCCCeEEEeCCCC-cHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence            36789999999864 6677777765 89999999999888777555531                     1111112211


Q ss_pred             HHHHH-cCCccEEEEccCC-----c---ccHHHHHHhhccCCEEEEE
Q 021300          240 EMQAA-MGTMDGIIDTVSA-----V---HPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       240 ~~~~~-~~~~d~v~d~~g~-----~---~~~~~~~~~l~~~G~~v~~  277 (314)
                      .+... .+.||+|++...-     .   ..+..+.+.|+|||+++++
T Consensus       144 ~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~  190 (252)
T 2gb4_A          144 DLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA  190 (252)
T ss_dssp             TGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred             cCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            11111 2579999975321     1   1366788899999998644

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=96.64  E-value=0.02  Score=50.86  Aligned_cols=74  Identities=18%  Similarity=0.192  Sum_probs=49.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC-----hhhHHHHH---HHcCCcEE---ecCCCHHHHHHH-------
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-----PSKKSEAI---ERLGADSF---LVSRDQDEMQAA-------  244 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~-----~~~~~~~~---~~~ga~~~---v~~~~~~~~~~~-------  244 (314)
                      +.++||.|+ |++|...++.+...|++|+++.++     .++.+++.   +..+.+..   .|-.+++.+.+.       
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~   84 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGE   84 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            578899887 999999999999999999988775     22233332   23343322   244454433322       


Q ss_pred             cCCccEEEEccCC
Q 021300          245 MGTMDGIIDTVSA  257 (314)
Q Consensus       245 ~~~~d~v~d~~g~  257 (314)
                      .+++|++|+++|.
T Consensus        85 ~g~iD~lVnnAG~   97 (324)
T 3u9l_A           85 DGRIDVLIHNAGH   97 (324)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            2489999999983

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=96.62  E-value=0.0053  Score=54.44  Aligned_cols=95  Identities=21%  Similarity=0.317  Sum_probs=63.8

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHHcCCccEEEEccCCcc---
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~g~~~---  259 (314)
                      .+|||.|+ |.+|...++.+...|.+|+++++++.+..++ +..+...+ .|-.+++.+.++..++|+||.+++...   
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l-~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   92 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL-AYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRP   92 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG-GGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--------
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh-ccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcCCC
Confidence            47999998 9999999999998999999999987654333 12244332 355667777777788999999987421   


Q ss_pred             ------------cHHHHHHhhcc-C-CEEEEEcCC
Q 021300          260 ------------PLMPLIGLLKS-Q-GKLVLVGAP  280 (314)
Q Consensus       260 ------------~~~~~~~~l~~-~-G~~v~~G~~  280 (314)
                                  ....+++.+.+ + ++++.+++.
T Consensus        93 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~  127 (342)
T 2x4g_A           93 RRWQEEVASALGQTNPFYAACLQARVPRILYVGSA  127 (342)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHTCSCEEEECCG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCH
Confidence                        12234444433 3 688888764

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=96.62  E-value=0.013  Score=51.57  Aligned_cols=92  Identities=13%  Similarity=0.219  Sum_probs=64.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh------hhHHHH--HHHcCCcEE-ecCCCHHHHHHHcCCccEEEE
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP------SKKSEA--IERLGADSF-LVSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~------~~~~~~--~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d  253 (314)
                      ..+|||.|+ |.+|...++.+...|.+|+++++++      ++...+  .+..+...+ .|..+++.+.++..++|+||.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~   83 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS   83 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            356999998 9999999999988999999999985      222222  123355433 366777888888889999999


Q ss_pred             ccCCc--ccHHHHHHhhccCC---EEE
Q 021300          254 TVSAV--HPLMPLIGLLKSQG---KLV  275 (314)
Q Consensus       254 ~~g~~--~~~~~~~~~l~~~G---~~v  275 (314)
                      +++..  .....+++.++..|   +++
T Consensus        84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           84 ALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             CCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             CCCccchhhHHHHHHHHHHhCCccEEe
Confidence            98853  23455666665433   666

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=96.62  E-value=0.0037  Score=55.46  Aligned_cols=99  Identities=14%  Similarity=0.157  Sum_probs=64.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-CcE-EecCCCHHHHHHHcC--CccEEEEccC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADS-FLVSRDQDEMQAAMG--TMDGIIDTVS  256 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-a~~-~v~~~~~~~~~~~~~--~~d~v~d~~g  256 (314)
                      ..+.+|||.|+ |.+|...++.+...|.+|+++++......++.+.+. ... ..|-.+++.+.++..  ++|+||+++|
T Consensus        18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~   97 (330)
T 2pzm_A           18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAA   97 (330)
T ss_dssp             TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCc
Confidence            45678999998 999999999988889999999986543221112222 222 234556666666655  8999999997


Q ss_pred             Cccc--------------HHHHHHhhc-c-CCEEEEEcCC
Q 021300          257 AVHP--------------LMPLIGLLK-S-QGKLVLVGAP  280 (314)
Q Consensus       257 ~~~~--------------~~~~~~~l~-~-~G~~v~~G~~  280 (314)
                      ....              ...+++.+. . .++++.+++.
T Consensus        98 ~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~  137 (330)
T 2pzm_A           98 AYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTA  137 (330)
T ss_dssp             CCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEG
T ss_pred             cCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCH
Confidence            4321              122333333 2 3689888753

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=96.61  E-value=0.0051  Score=53.20  Aligned_cols=97  Identities=25%  Similarity=0.378  Sum_probs=71.5

Q ss_pred             cccchhhhhhhhhhHhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHC--CCeEEEEeCChhhHHHHHHHcCCcEEecCCCH
Q 021300          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERLGADSFLVSRDQ  238 (314)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag-~vG~~a~~~a~~~--g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~  238 (314)
                      ..+||....+...+++.+.--.|.+++|+|+| .+|..+++++...  |++|++..+...                    
T Consensus       136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~--------------------  195 (281)
T 2c2x_A          136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTR--------------------  195 (281)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCS--------------------
T ss_pred             CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchh--------------------
Confidence            35677777777777776644689999999996 5799999999988  889887754432                    


Q ss_pred             HHHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          239 DEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       239 ~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                       .+.+....+|++|-++|.+..+  --+.++++-.++++|.+.
T Consensus       196 -~L~~~~~~ADIVI~Avg~p~~I--~~~~vk~GavVIDVgi~r  235 (281)
T 2c2x_A          196 -DLPALTRQADIVVAAVGVAHLL--TADMVRPGAAVIDVGVSR  235 (281)
T ss_dssp             -CHHHHHTTCSEEEECSCCTTCB--CGGGSCTTCEEEECCEEE
T ss_pred             -HHHHHHhhCCEEEECCCCCccc--CHHHcCCCcEEEEccCCC
Confidence             2234456689999999987532  234578899999999864

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=96.61  E-value=0.0024  Score=54.42  Aligned_cols=90  Identities=17%  Similarity=0.217  Sum_probs=59.2

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHc----CCccEEEEccCCcc
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVH  259 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~----~~~d~v~d~~g~~~  259 (314)
                      .++||.|+ |++|...++.+...|++|+++++++++...       ....|-.+++.+.++.    +++|++|+++|...
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~   74 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGP   74 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------ccccCCCCHHHHHHHHHHhCCCCCEEEECCCCCC
Confidence            36899997 999999999999999999999988653211       1001222233343333    45799999998542


Q ss_pred             ------------------cHHHHHHhhcc--CCEEEEEcCCC
Q 021300          260 ------------------PLMPLIGLLKS--QGKLVLVGAPE  281 (314)
Q Consensus       260 ------------------~~~~~~~~l~~--~G~~v~~G~~~  281 (314)
                                        .+..+++.|++  .|+++.+++..
T Consensus        75 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  116 (257)
T 1fjh_A           75 QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVA  116 (257)
T ss_dssp             TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG
T ss_pred             CcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChh
Confidence                              13345555544  38999998754

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.60  E-value=0.0094  Score=50.27  Aligned_cols=97  Identities=19%  Similarity=0.140  Sum_probs=66.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCChhhHHHHHHH---cCCc--EEecCCCH-HHHHHH--------
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIER---LGAD--SFLVSRDQ-DEMQAA--------  244 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~--g~~vi~v~~~~~~~~~~~~~---~ga~--~~v~~~~~-~~~~~~--------  244 (314)
                      ..++++||-+|+| .|..+..+++..  +.+++.++.++...+.+.+.   .|.+  .-+...+. +.+...        
T Consensus        58 ~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~  136 (239)
T 2hnk_A           58 ISGAKRIIEIGTF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPS  136 (239)
T ss_dssp             HHTCSEEEEECCT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred             hhCcCEEEEEeCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccc
Confidence            4678899999987 488889999987  57999999998766555433   3432  22223332 333333        


Q ss_pred             -------c-CCccEEEEccCCc---ccHHHHHHhhccCCEEEEEc
Q 021300          245 -------M-GTMDGIIDTVSAV---HPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       245 -------~-~~~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~G  278 (314)
                             . +.||+|+......   ..+..+.+.|+++|+++.--
T Consensus       137 ~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  181 (239)
T 2hnk_A          137 WASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN  181 (239)
T ss_dssp             GGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence                   1 6799999876543   23577889999999998864

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.60  E-value=0.0043  Score=49.98  Aligned_cols=98  Identities=13%  Similarity=0.194  Sum_probs=64.5

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc--EEecCCCHHHHHH-HcCCccEEEE
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD--SFLVSRDQDEMQA-AMGTMDGIID  253 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~--~~v~~~~~~~~~~-~~~~~d~v~d  253 (314)
                      .+++|++||=+|+|. |..+..+++. +.+|+.++.+++..+.+.+.+   +.+  .++. .+...+.. ..+.||+|+-
T Consensus        19 ~~~~~~~vLDiGcG~-G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~~~~l~~~~~~~fD~v~~   95 (185)
T 3mti_A           19 VLDDESIVVDATMGN-GNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELIL-DGHENLDHYVREPIRAAIF   95 (185)
T ss_dssp             TCCTTCEEEESCCTT-SHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SCGGGGGGTCCSCEEEEEE
T ss_pred             hCCCCCEEEEEcCCC-CHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-CcHHHHHhhccCCcCEEEE
Confidence            368999999899875 7788888877 889999999988765554332   432  2222 33222211 2346999986


Q ss_pred             ccCCc---------------ccHHHHHHhhccCCEEEEEcCC
Q 021300          254 TVSAV---------------HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       254 ~~g~~---------------~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      +.+..               ..+..+.+.|+++|+++.+...
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  137 (185)
T 3mti_A           96 NLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY  137 (185)
T ss_dssp             EEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred             eCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence            64311               1247778999999999887554

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.60  E-value=0.011  Score=50.62  Aligned_cols=74  Identities=16%  Similarity=0.214  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHH----HH----cCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQ----AA----MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~----~~----~~~  247 (314)
                      .|.++||.|+ |++|...++.+...|++|+++.+++++.+++.+++   +.+..   .|-.+++.+.    +.    .+.
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999887 99999999999999999999999987766655444   43221   2444443322    22    357


Q ss_pred             ccEEEEccC
Q 021300          248 MDGIIDTVS  256 (314)
Q Consensus       248 ~d~v~d~~g  256 (314)
                      +|++|+++|
T Consensus        84 id~lvnnAg   92 (260)
T 2qq5_A           84 LDVLVNNAY   92 (260)
T ss_dssp             CCEEEECCC
T ss_pred             ceEEEECCc
Confidence            899999994

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=96.59  E-value=0.0046  Score=54.87  Aligned_cols=98  Identities=16%  Similarity=0.194  Sum_probs=62.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-CCcE-EecCCCHHHHHHHcCC--ccEEEEccCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-GADS-FLVSRDQDEMQAAMGT--MDGIIDTVSA  257 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~-ga~~-~v~~~~~~~~~~~~~~--~d~v~d~~g~  257 (314)
                      .+.+|||.|+ |.+|...++.+...|.+|+++++......+..+.+ +... ..|-.+++.+.++..+  +|+||++++.
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~   99 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAAS   99 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECcee
Confidence            4678999997 99999999999889999999998754321111111 2221 2345566666665554  9999999874


Q ss_pred             ccc--------------HHHHHHhhcc-C-CEEEEEcCC
Q 021300          258 VHP--------------LMPLIGLLKS-Q-GKLVLVGAP  280 (314)
Q Consensus       258 ~~~--------------~~~~~~~l~~-~-G~~v~~G~~  280 (314)
                      ...              ...+++.+.+ + ++++.+++.
T Consensus       100 ~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~  138 (333)
T 2q1w_A          100 YKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTA  138 (333)
T ss_dssp             CSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEG
T ss_pred             cCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcH
Confidence            321              2234444433 3 588888653

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=96.59  E-value=0.012  Score=52.76  Aligned_cols=96  Identities=17%  Similarity=0.112  Sum_probs=65.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhH--HHHHHHc-CCcEE-ec-CCCHHHHHHHcCCccEEEEccCC
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK--SEAIERL-GADSF-LV-SRDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~--~~~~~~~-ga~~~-v~-~~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      +.+|||.|+ |.+|...++.+...|.+|+++++++++.  ..+. .. +...+ .| ..+++.+.+...++|.||.+.+.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~-~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~   83 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ-AIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS   83 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHH-TSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHh-hcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence            467999998 9999999998888899999999887654  2332 22 33322 24 55677777777889999987754


Q ss_pred             c-----ccHHHHHHhhcc-C--CEEEEEcCC
Q 021300          258 V-----HPLMPLIGLLKS-Q--GKLVLVGAP  280 (314)
Q Consensus       258 ~-----~~~~~~~~~l~~-~--G~~v~~G~~  280 (314)
                      .     .....+++.++. +  +++|.+++.
T Consensus        84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~  114 (352)
T 1xgk_A           84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMP  114 (352)
T ss_dssp             TTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred             CCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence            2     112344455543 3  589988765

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=96.59  E-value=0.0032  Score=53.61  Aligned_cols=98  Identities=18%  Similarity=0.160  Sum_probs=69.2

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCChhhHHHHHHH---cCCc--EEecCCCHHHHHHH-cCCccE
Q 021300          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIER---LGAD--SFLVSRDQDEMQAA-MGTMDG  250 (314)
Q Consensus       179 ~~~~~g~~vlI~Gag~vG~~a~~~a~~~--g~~vi~v~~~~~~~~~~~~~---~ga~--~~v~~~~~~~~~~~-~~~~d~  250 (314)
                      ..++++++||-+|+|. |..+..+++..  +.+++.++.+++..+.+.+.   .|..  .-+...+..  ... .+.||+
T Consensus        89 ~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~~~~~~~~D~  165 (255)
T 3mb5_A           89 AGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIY--EGIEEENVDH  165 (255)
T ss_dssp             TTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGG--GCCCCCSEEE
T ss_pred             hCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchh--hccCCCCcCE
Confidence            3478999999999876 88888888884  56999999988766555443   2432  222223321  112 235999


Q ss_pred             EEEccCCc-ccHHHHHHhhccCCEEEEEcC
Q 021300          251 IIDTVSAV-HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       251 v~d~~g~~-~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      |+-..... ..+..+.+.|+++|+++.+..
T Consensus       166 v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  195 (255)
T 3mb5_A          166 VILDLPQPERVVEHAAKALKPGGFFVAYTP  195 (255)
T ss_dssp             EEECSSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             EEECCCCHHHHHHHHHHHcCCCCEEEEEEC
Confidence            99877765 368999999999999998854

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=96.58  E-value=0.011  Score=50.87  Aligned_cols=96  Identities=16%  Similarity=0.157  Sum_probs=63.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHH-------HHcCCccEEEEc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ-------AAMGTMDGIIDT  254 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~-------~~~~~~d~v~d~  254 (314)
                      .|+++||.|+ +++|.+.++.+...|++|+++.++.++.  +.+.+  ....|-.+++.+.       +..+++|+++++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--~~~~~--~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnn   85 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG--LPEEL--FVEADLTTKEGCAIVAEATRQRLGGVDVIVHM   85 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT--SCTTT--EEECCTTSHHHHHHHHHHHHHHTSSCSEEEEC
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC--CCcEE--EEEcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            6889999887 9999999999999999999999875421  11111  1123444443322       223579999998


Q ss_pred             cCCc---------------------------ccHHHHHHhhc--cCCEEEEEcCCCC
Q 021300          255 VSAV---------------------------HPLMPLIGLLK--SQGKLVLVGAPEK  282 (314)
Q Consensus       255 ~g~~---------------------------~~~~~~~~~l~--~~G~~v~~G~~~~  282 (314)
                      .|..                           ...+.+++.|+  .+|++|.+++..+
T Consensus        86 AG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~  142 (261)
T 4h15_A           86 LGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQR  142 (261)
T ss_dssp             CCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhh
Confidence            8731                           11334555553  4689999987543

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=96.57  E-value=0.0058  Score=55.00  Aligned_cols=97  Identities=15%  Similarity=0.179  Sum_probs=66.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCCcEE-ecCC-CHHHHHHHcCCccEEEEccCCcc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSF-LVSR-DQDEMQAAMGTMDGIIDTVSAVH  259 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~-~~~~~~~~~~~~d~v~d~~g~~~  259 (314)
                      +.+|||.|+ |.+|...++.+... |.+|+++++++++...+.+..+.+.+ .|-. +++.+.++..++|+||.+++...
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~~~  103 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVAIAT  103 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBCCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCcccc
Confidence            478999997 99999999988877 89999999987665444322233332 2445 66777666668999999887432


Q ss_pred             c-----------------HHHHHHhhc-cCCEEEEEcCC
Q 021300          260 P-----------------LMPLIGLLK-SQGKLVLVGAP  280 (314)
Q Consensus       260 ~-----------------~~~~~~~l~-~~G~~v~~G~~  280 (314)
                      .                 ...+++.++ .+.++|.+++.
T Consensus       104 ~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~  142 (372)
T 3slg_A          104 PATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTS  142 (372)
T ss_dssp             HHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCG
T ss_pred             HHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcH
Confidence            1                 123444443 34688888763

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.56  E-value=0.0031  Score=54.41  Aligned_cols=96  Identities=22%  Similarity=0.251  Sum_probs=61.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHH-------HHcCCccEEEE
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ-------AAMGTMDGIID  253 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~-------~~~~~~d~v~d  253 (314)
                      -.|.++||.|+ |++|.+.++.+...|++|+++.++.+..... ..+    ..|-.+.+.+.       +..+++|++|+
T Consensus        26 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~-~~~----~~Dv~~~~~~~~~~~~~~~~~g~iD~lvn  100 (266)
T 3uxy_A           26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD-LHL----PGDLREAAYADGLPGAVAAGLGRLDIVVN  100 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCS-EEC----CCCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhh-hcc----CcCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            35788999987 9999999999999999999988876533211 000    12333433222       22357999999


Q ss_pred             ccCCcc-------------------------cHHHHHHhhc--cCCEEEEEcCCCC
Q 021300          254 TVSAVH-------------------------PLMPLIGLLK--SQGKLVLVGAPEK  282 (314)
Q Consensus       254 ~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~G~~~~  282 (314)
                      ++|...                         .+..++..|+  ..|+++.+++..+
T Consensus       101 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~  156 (266)
T 3uxy_A          101 NAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWG  156 (266)
T ss_dssp             CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHh
Confidence            988421                         1223444444  3789999987644

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.56  E-value=0.0085  Score=51.89  Aligned_cols=96  Identities=17%  Similarity=0.158  Sum_probs=65.5

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CC--cEEecCCCHHHHHHHcCCccEEEEc
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA--DSFLVSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga--~~~v~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      .++++.+||-+|+|. |..+..+++..|.+++.++.++...+.+.+.+   +.  ..-+...+..   ...+.||+|+..
T Consensus        61 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~---~~~~~fD~v~~~  136 (287)
T 1kpg_A           61 GLQPGMTLLDVGCGW-GATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWE---QFDEPVDRIVSI  136 (287)
T ss_dssp             TCCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGG---GCCCCCSEEEEE
T ss_pred             CCCCcCEEEEECCcc-cHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChh---hCCCCeeEEEEe
Confidence            368999999999876 77888888777899999999988776554432   21  1112222221   222679999865


Q ss_pred             -----cCC---cccHHHHHHhhccCCEEEEEcC
Q 021300          255 -----VSA---VHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       255 -----~g~---~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                           .+.   ...+..+.+.|+++|++++...
T Consensus       137 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  169 (287)
T 1kpg_A          137 GAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI  169 (287)
T ss_dssp             SCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             CchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence                 221   2347778899999999988643

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=96.55  E-value=0.0076  Score=58.48  Aligned_cols=99  Identities=16%  Similarity=0.242  Sum_probs=61.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC---------ChhhHHHHHH---HcCCcEEecCCCHHHHHHHc---
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST---------SPSKKSEAIE---RLGADSFLVSRDQDEMQAAM---  245 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~---------~~~~~~~~~~---~~ga~~~v~~~~~~~~~~~~---  245 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|+++++         +.++.+++.+   +.+...+.|..+.+.+.++.   
T Consensus        17 l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~   96 (613)
T 3oml_A           17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETA   96 (613)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC--
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHH
Confidence            35788999887 99999999999999999998876         4444433333   34555566666654333322   


Q ss_pred             ----CCccEEEEccCCcc-------------------------cHHHHHHhhcc--CCEEEEEcCC
Q 021300          246 ----GTMDGIIDTVSAVH-------------------------PLMPLIGLLKS--QGKLVLVGAP  280 (314)
Q Consensus       246 ----~~~d~v~d~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~G~~  280 (314)
                          +.+|++|+++|...                         ....++..|+.  +|+||.+++.
T Consensus        97 ~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~  162 (613)
T 3oml_A           97 IKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSN  162 (613)
T ss_dssp             --------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCH
T ss_pred             HHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCH
Confidence                36999999998421                         13334555543  4899999874

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=96.55  E-value=0.021  Score=48.82  Aligned_cols=76  Identities=22%  Similarity=0.287  Sum_probs=51.0

Q ss_pred             CCCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCChhh-----HHHHHHHcCCcEEe---cCCCHHHHHH-------
Q 021300          182 KPGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPSK-----KSEAIERLGADSFL---VSRDQDEMQA-------  243 (314)
Q Consensus       182 ~~g~~vlI~Ga---g~vG~~a~~~a~~~g~~vi~v~~~~~~-----~~~~~~~~ga~~~v---~~~~~~~~~~-------  243 (314)
                      -.|.++||.|+   +++|...++.+...|++++++.++..+     .+++.+..+.+..+   |-.+++.+.+       
T Consensus        18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (267)
T 3gdg_A           18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVA   97 (267)
T ss_dssp             CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence            35788999885   499999999999999999998877543     23333344544332   3344433222       


Q ss_pred             HcCCccEEEEccCC
Q 021300          244 AMGTMDGIIDTVSA  257 (314)
Q Consensus       244 ~~~~~d~v~d~~g~  257 (314)
                      ..+.+|++|+++|.
T Consensus        98 ~~g~id~li~nAg~  111 (267)
T 3gdg_A           98 DFGQIDAFIANAGA  111 (267)
T ss_dssp             HTSCCSEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence            23479999999883

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=96.54  E-value=0.012  Score=52.67  Aligned_cols=97  Identities=10%  Similarity=0.106  Sum_probs=63.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHH--CCCeEEEEeCChhhHH----------HHH--HHcCCcE-EecCCCHHHHHHH-c
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKA--MGVKVTVISTSPSKKS----------EAI--ERLGADS-FLVSRDQDEMQAA-M  245 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~--~g~~vi~v~~~~~~~~----------~~~--~~~ga~~-~v~~~~~~~~~~~-~  245 (314)
                      .+.+|||.|+ |.+|...++.+..  .|.+|+++++......          ...  ...+... ..|-.+++.+.++ .
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   88 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEK   88 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhc
Confidence            5689999997 9999999998888  8999999998654110          000  1112222 2355667777777 6


Q ss_pred             CCccEEEEccCCcc---------------cHHHHHHhhc-cCCEEEEEcC
Q 021300          246 GTMDGIIDTVSAVH---------------PLMPLIGLLK-SQGKLVLVGA  279 (314)
Q Consensus       246 ~~~d~v~d~~g~~~---------------~~~~~~~~l~-~~G~~v~~G~  279 (314)
                      .++|+||++++...               ....+++.++ .++++|.+++
T Consensus        89 ~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS  138 (362)
T 3sxp_A           89 LHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASS  138 (362)
T ss_dssp             SCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             cCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCc
Confidence            78999999998432               1123344443 4667887775

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.54  E-value=0.0065  Score=53.78  Aligned_cols=98  Identities=22%  Similarity=0.167  Sum_probs=67.1

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHH---cCCc-EEecCCCHHHHHHHcCCccEEEE
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIER---LGAD-SFLVSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~~---~ga~-~~v~~~~~~~~~~~~~~~d~v~d  253 (314)
                      .+++|++||-+|+|. |..+..+++..+  .+++.++.+++..+.+.+.   .|.+ .-+...+........+.||+|+.
T Consensus        72 ~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~  150 (317)
T 1dl5_A           72 GLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFV  150 (317)
T ss_dssp             TCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEE
T ss_pred             CCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEE
Confidence            478999999999876 888888888643  4699999998876555433   3432 11222222111112357999998


Q ss_pred             ccCCcccHHHHHHhhccCCEEEEEc
Q 021300          254 TVSAVHPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       254 ~~g~~~~~~~~~~~l~~~G~~v~~G  278 (314)
                      ...-......+.+.|+++|+++..-
T Consensus       151 ~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          151 TVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             CSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             cCCHHHHHHHHHHhcCCCcEEEEEE
Confidence            7765555678899999999988874

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.53  E-value=0.0013  Score=56.46  Aligned_cols=89  Identities=18%  Similarity=0.144  Sum_probs=62.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc---
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---  258 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---  258 (314)
                      .| +++|+|+|++|.+++..+...|+ +++++.|+.++.+++.++++.   ....   ...+....+|+||+++...   
T Consensus       108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~~---~~~~~~~~aDiVInatp~gm~p  180 (253)
T 3u62_A          108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSLD---QLDEVVKKAKSLFNTTSVGMKG  180 (253)
T ss_dssp             CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEGG---GHHHHHHTCSEEEECSSTTTTS
T ss_pred             CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCHH---HHHhhhcCCCEEEECCCCCCCC
Confidence            56 99999999999999999999998 899999998877666554432   2222   2334445799999988532   


Q ss_pred             --ccHHHHHHhhccCCEEEEEcCC
Q 021300          259 --HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       259 --~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                        ..+  ....++++..++++-..
T Consensus       181 ~~~~i--~~~~l~~~~~V~Divy~  202 (253)
T 3u62_A          181 EELPV--SDDSLKNLSLVYDVIYF  202 (253)
T ss_dssp             CCCSC--CHHHHTTCSEEEECSSS
T ss_pred             CCCCC--CHHHhCcCCEEEEeeCC
Confidence              112  13456777788877543

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=96.53  E-value=0.014  Score=49.42  Aligned_cols=97  Identities=16%  Similarity=0.232  Sum_probs=56.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH-HHHH-----HH---cCCccEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-DEMQ-----AA---MGTMDGII  252 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~-~~~~-----~~---~~~~d~v~  252 (314)
                      .|.++||.|+ |++|.+.++.+.. |++|+++.+++++.+++.+ ......+ ..|. +...     +.   .+.+|++|
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-~~~~~~~-~~D~~~~~~~~~~~~~~~~~~~id~lv   80 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-IEGVEPI-ESDIVKEVLEEGGVDKLKNLDHVDTLV   80 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-STTEEEE-ECCHHHHHHTSSSCGGGTTCSCCSEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-hcCCcce-ecccchHHHHHHHHHHHHhcCCCCEEE
Confidence            3678999997 9999988887765 8999999999887766654 3221212 2221 1100     01   13689999


Q ss_pred             EccCCcc-------------------------cHHHHHHhhc-cCCEEEEEcCCCC
Q 021300          253 DTVSAVH-------------------------PLMPLIGLLK-SQGKLVLVGAPEK  282 (314)
Q Consensus       253 d~~g~~~-------------------------~~~~~~~~l~-~~G~~v~~G~~~~  282 (314)
                      +++|...                         ....++..++ .+|+++.+++..+
T Consensus        81 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~  136 (245)
T 3e9n_A           81 HAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAG  136 (245)
T ss_dssp             ECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----
T ss_pred             ECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCccc
Confidence            9998421                         0223344443 4699999987543

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=96.52  E-value=0.013  Score=51.45  Aligned_cols=91  Identities=18%  Similarity=0.222  Sum_probs=64.6

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh-hHHHH--HHHcCCcEE-ecCCCHHHHHHHcCCccEEEEccCCc-
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEA--IERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAV-  258 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~--~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~g~~-  258 (314)
                      .+|||.|+ |.+|...++.+...|.+|+++++++. +...+  .+..++..+ .|..+++.+.++..++|+||.+++.. 
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~~   91 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFPQ   91 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGGG
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchhh
Confidence            46999998 99999999999989999999999874 32222  123455433 36677788888888999999998743 


Q ss_pred             -ccHHHHHHhhccC---CEEE
Q 021300          259 -HPLMPLIGLLKSQ---GKLV  275 (314)
Q Consensus       259 -~~~~~~~~~l~~~---G~~v  275 (314)
                       .....+++.++..   ++++
T Consensus        92 ~~~~~~l~~aa~~~g~v~~~v  112 (318)
T 2r6j_A           92 ILDQFKILEAIKVAGNIKRFL  112 (318)
T ss_dssp             STTHHHHHHHHHHHCCCCEEE
T ss_pred             hHHHHHHHHHHHhcCCCCEEE
Confidence             2245566666543   3665

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=96.51  E-value=0.0061  Score=54.16  Aligned_cols=90  Identities=13%  Similarity=0.130  Sum_probs=66.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC-ChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc-
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-  259 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~-~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~-  259 (314)
                      -.|.++.|+|.|.+|...++.++.+|.+|+++++ ++++.  ..+++|+.. .  .+.   .++....|+|+.++.... 
T Consensus       144 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~--~~~~~g~~~-~--~~l---~ell~~aDvVil~~p~~~~  215 (320)
T 1gdh_A          144 LDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS--DEASYQATF-H--DSL---DSLLSVSQFFSLNAPSTPE  215 (320)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH--HHHHHTCEE-C--SSH---HHHHHHCSEEEECCCCCTT
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh--hhhhcCcEE-c--CCH---HHHHhhCCEEEEeccCchH
Confidence            4688999999999999999999999999999998 76542  334567642 1  122   233446899999886432 


Q ss_pred             ---cH-HHHHHhhccCCEEEEEcC
Q 021300          260 ---PL-MPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       260 ---~~-~~~~~~l~~~G~~v~~G~  279 (314)
                         .+ ...+..|+++..++.++.
T Consensus       216 t~~~i~~~~l~~mk~gailIn~ar  239 (320)
T 1gdh_A          216 TRYFFNKATIKSLPQGAIVVNTAR  239 (320)
T ss_dssp             TTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             HHhhcCHHHHhhCCCCcEEEECCC
Confidence               12 457788999999999987

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=96.50  E-value=0.0056  Score=55.02  Aligned_cols=91  Identities=20%  Similarity=0.191  Sum_probs=65.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc--
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--  259 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~--  259 (314)
                      -.|.++.|+|.|.+|...++.++.+|++|+++.+...+.  ..+.+|++.+   .+.   .++....|+|+-++....  
T Consensus       166 l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~g~~~~---~~l---~ell~~aDvV~l~~P~t~~t  237 (347)
T 1mx3_A          166 IRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDG--VERALGLQRV---STL---QDLLFHSDCVTLHCGLNEHN  237 (347)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTT--HHHHHTCEEC---SSH---HHHHHHCSEEEECCCCCTTC
T ss_pred             CCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh--hHhhcCCeec---CCH---HHHHhcCCEEEEcCCCCHHH
Confidence            367899999999999999999999999999988765532  2345676432   122   233345899998875421  


Q ss_pred             --cH-HHHHHhhccCCEEEEEcCC
Q 021300          260 --PL-MPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       260 --~~-~~~~~~l~~~G~~v~~G~~  280 (314)
                        .+ ...+..|+++..++.++..
T Consensus       238 ~~li~~~~l~~mk~gailIN~arg  261 (347)
T 1mx3_A          238 HHLINDFTVKQMRQGAFLVNTARG  261 (347)
T ss_dssp             TTSBSHHHHTTSCTTEEEEECSCT
T ss_pred             HHHhHHHHHhcCCCCCEEEECCCC
Confidence              12 5677888999888888764

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.50  E-value=0.007  Score=50.91  Aligned_cols=92  Identities=24%  Similarity=0.286  Sum_probs=60.5

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe--cCCCHHHHHHH-------c--CCccEE
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL--VSRDQDEMQAA-------M--GTMDGI  251 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v--~~~~~~~~~~~-------~--~~~d~v  251 (314)
                      +.++||.|+ |++|.+.++.+...|++|+++.+++++..      +....+  |-.+++.+.++       .  +++|++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            567899997 99999999999999999999998875431      111111  22233322221       2  579999


Q ss_pred             EEccCCc-------c-------------------cHHHHHHhhccCCEEEEEcCCC
Q 021300          252 IDTVSAV-------H-------------------PLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       252 ~d~~g~~-------~-------------------~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      |+++|..       .                   ....+++.|+++|+++.+++..
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~  132 (236)
T 1ooe_A           77 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAA  132 (236)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchh
Confidence            9999831       0                   0233445555678999998754

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=96.49  E-value=0.02  Score=47.92  Aligned_cols=98  Identities=17%  Similarity=0.190  Sum_probs=66.0

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCChhhHHHHHH---HcCCc---EEecCCCH-HHHHHH-cCCccE
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIE---RLGAD---SFLVSRDQ-DEMQAA-MGTMDG  250 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~--g~~vi~v~~~~~~~~~~~~---~~ga~---~~v~~~~~-~~~~~~-~~~~d~  250 (314)
                      .+++.+||=+|+|. |..++.+++.+  +.+++.++.+++..+.+.+   +.|..   .-+...+. +.+... .+.||+
T Consensus        54 ~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~  132 (221)
T 3dr5_A           54 GNGSTGAIAITPAA-GLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQL  132 (221)
T ss_dssp             CTTCCEEEEESTTH-HHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEE
T ss_pred             CCCCCCEEEEcCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCe
Confidence            45667999889875 88889999976  5799999999876654433   33432   22223332 333333 457999


Q ss_pred             EEEccCCc---ccHHHHHHhhccCCEEEEEcC
Q 021300          251 IIDTVSAV---HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       251 v~d~~g~~---~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      ||-.....   ..+..+.+.|++||.++.-..
T Consensus       133 V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn~  164 (221)
T 3dr5_A          133 VFGQVSPMDLKALVDAAWPLLRRGGALVLADA  164 (221)
T ss_dssp             EEECCCTTTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred             EEEcCcHHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            98655432   236778899999999998544

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=96.49  E-value=0.02  Score=48.91  Aligned_cols=75  Identities=12%  Similarity=0.114  Sum_probs=49.8

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCC---CeEEEEeCChhhHHHH---HHHcCCcEE---ecCCCHHHHHHH-------
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMG---VKVTVISTSPSKKSEA---IERLGADSF---LVSRDQDEMQAA-------  244 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g---~~vi~v~~~~~~~~~~---~~~~ga~~~---v~~~~~~~~~~~-------  244 (314)
                      ..+.++||.|+ |.+|...++.+...|   ++|+++.++.++.+.+   .+. +....   .|-.+++.+.++       
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~   97 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN-HSNIHILEIDLRNFDAYDKLVADIEGV   97 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH-CTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhcc-CCceEEEEecCCChHHHHHHHHHHHHh
Confidence            45678999987 999999999999889   8999999987643322   222 32221   233444322222       


Q ss_pred             cC--CccEEEEccCC
Q 021300          245 MG--TMDGIIDTVSA  257 (314)
Q Consensus       245 ~~--~~d~v~d~~g~  257 (314)
                      .+  .+|++|.++|.
T Consensus        98 ~g~~~id~li~~Ag~  112 (267)
T 1sny_A           98 TKDQGLNVLFNNAGI  112 (267)
T ss_dssp             HGGGCCSEEEECCCC
T ss_pred             cCCCCccEEEECCCc
Confidence            22  69999999984

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.48  E-value=0.016  Score=51.36  Aligned_cols=89  Identities=15%  Similarity=0.245  Sum_probs=63.3

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHH
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP  263 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~  263 (314)
                      ..+|.|+|.|.+|...++.+...|.+|+++++++++.+++.+ .|+...   .+   ..+.....|+||.++.....+..
T Consensus        31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~-~g~~~~---~~---~~e~~~~aDvVi~~vp~~~~~~~  103 (320)
T 4dll_A           31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAA-LGATIH---EQ---ARAAARDADIVVSMLENGAVVQD  103 (320)
T ss_dssp             CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-TTCEEE---SS---HHHHHTTCSEEEECCSSHHHHHH
T ss_pred             CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-CCCEee---CC---HHHHHhcCCEEEEECCCHHHHHH
Confidence            458999999999999999999999999999999988777643 465332   12   22344568999999886533444


Q ss_pred             HH------HhhccCCEEEEEcC
Q 021300          264 LI------GLLKSQGKLVLVGA  279 (314)
Q Consensus       264 ~~------~~l~~~G~~v~~G~  279 (314)
                      .+      ..++++..++.++.
T Consensus       104 v~~~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          104 VLFAQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             HHTTTCHHHHCCTTCEEEECSC
T ss_pred             HHcchhHHhhCCCCCEEEecCC
Confidence            44      34566666666654

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=96.47  E-value=0.014  Score=49.34  Aligned_cols=94  Identities=21%  Similarity=0.217  Sum_probs=61.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE--ecCCCHHHHHHH-------c--CCcc
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF--LVSRDQDEMQAA-------M--GTMD  249 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~--v~~~~~~~~~~~-------~--~~~d  249 (314)
                      ..+.++||.|+ |++|...++.+...|++|+++.+++++..      +....  .|-.+++.+.++       .  +++|
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD   78 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   78 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            45788999997 99999999999999999999998865431      11111  122333322221       2  5799


Q ss_pred             EEEEccCCc-------c-------------------cHHHHHHhhccCCEEEEEcCCC
Q 021300          250 GIIDTVSAV-------H-------------------PLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       250 ~v~d~~g~~-------~-------------------~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      ++|+++|..       .                   ....+++.|+++|+++.+++..
T Consensus        79 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~  136 (241)
T 1dhr_A           79 AILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKA  136 (241)
T ss_dssp             EEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             EEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHH
Confidence            999998831       0                   1122344555679999998754

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=96.47  E-value=0.011  Score=51.33  Aligned_cols=96  Identities=20%  Similarity=0.104  Sum_probs=64.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHc-----CC----cEEecCCCHHHHHHHcCCccEE
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERL-----GA----DSFLVSRDQDEMQAAMGTMDGI  251 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~-----ga----~~~v~~~~~~~~~~~~~~~d~v  251 (314)
                      ..+.+||++|+|. |..+..+++..+ .++++++.+++-.+.+.+.+     +.    -.++..+..+.+....+.||+|
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~I  152 (275)
T 1iy9_A           74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI  152 (275)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred             CCCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEE
Confidence            3568999998764 566677777655 58999999987765554444     11    1333333344554445679998


Q ss_pred             EEccCC----------cccHHHHHHhhccCCEEEEEc
Q 021300          252 IDTVSA----------VHPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       252 ~d~~g~----------~~~~~~~~~~l~~~G~~v~~G  278 (314)
                      +-....          ...+..+.+.|+++|.++.-.
T Consensus       153 i~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~  189 (275)
T 1iy9_A          153 MVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (275)
T ss_dssp             EESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             EECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            875432          234788999999999998874

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=96.47  E-value=0.00073  Score=55.08  Aligned_cols=96  Identities=17%  Similarity=0.081  Sum_probs=62.3

Q ss_pred             hcCCCCCCCEEEEEcCChHHHHHHHHHHHCC----------CeEEEEeCChhhHHHHHHHcCCcEEe-cC--CCHHHH--
Q 021300          177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG----------VKVTVISTSPSKKSEAIERLGADSFL-VS--RDQDEM--  241 (314)
Q Consensus       177 ~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g----------~~vi~v~~~~~~~~~~~~~~ga~~~v-~~--~~~~~~--  241 (314)
                      ....++++++||.+|+|+ |..+..+++..+          .+++.++.++...  +   -.+. .+ ..  ...+..  
T Consensus        16 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~--~---~~~~-~~~~~d~~~~~~~~~   88 (196)
T 2nyu_A           16 RHQILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP--L---EGAT-FLCPADVTDPRTSQR   88 (196)
T ss_dssp             HHCCCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC--C---TTCE-EECSCCTTSHHHHHH
T ss_pred             hcCCCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc--C---CCCe-EEEeccCCCHHHHHH
Confidence            344468999999999988 889999999876          6888888886421  0   1222 22 11  122211  


Q ss_pred             -HHH-c-CCccEEEE-----ccCCc------------ccHHHHHHhhccCCEEEEEcC
Q 021300          242 -QAA-M-GTMDGIID-----TVSAV------------HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       242 -~~~-~-~~~d~v~d-----~~g~~------------~~~~~~~~~l~~~G~~v~~G~  279 (314)
                       ... . +.||+|+-     +++..            ..+..+.+.|+++|+++..-.
T Consensus        89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  146 (196)
T 2nyu_A           89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW  146 (196)
T ss_dssp             HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence             111 2 37999994     33332            346678899999999988744

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.46  E-value=0.018  Score=50.03  Aligned_cols=92  Identities=22%  Similarity=0.224  Sum_probs=60.7

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc------------CCc---------EEecCCCHHHHHH
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL------------GAD---------SFLVSRDQDEMQA  243 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~------------ga~---------~~v~~~~~~~~~~  243 (314)
                      .+|.|+|+|.+|...++.+...|.+|+++++++++.+++.+..            +..         .+....   ...+
T Consensus         5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~---~~~~   81 (283)
T 4e12_A            5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSD---DLAQ   81 (283)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEES---CHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeC---CHHH
Confidence            5799999999999999999999999999999988776665431            110         000011   1223


Q ss_pred             HcCCccEEEEccCCc-----ccHHHHHHhhccCCEEEEEcC
Q 021300          244 AMGTMDGIIDTVSAV-----HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       244 ~~~~~d~v~d~~g~~-----~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      ...++|+||+++...     ..+..+...++++..++...+
T Consensus        82 ~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS  122 (283)
T 4e12_A           82 AVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSS  122 (283)
T ss_dssp             HTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             HhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence            346799999999864     123444455566665554443

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.45  E-value=0.014  Score=48.69  Aligned_cols=98  Identities=15%  Similarity=0.083  Sum_probs=66.0

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCChhhHHHHHHH---cCC--cEEecCCC-HHHHHHHc-----CC
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIER---LGA--DSFLVSRD-QDEMQAAM-----GT  247 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~--g~~vi~v~~~~~~~~~~~~~---~ga--~~~v~~~~-~~~~~~~~-----~~  247 (314)
                      ..++.+||-+|+| .|..++.+++..  +.+++.++.++...+.+.+.   .|.  ..-+...+ .+.+..+.     +.
T Consensus        67 ~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~  145 (229)
T 2avd_A           67 LIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGT  145 (229)
T ss_dssp             HTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTC
T ss_pred             hcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCC
Confidence            4677899999987 588888999876  56999999988766554433   343  12222233 23333332     57


Q ss_pred             ccEEEEccCCc---ccHHHHHHhhccCCEEEEEcC
Q 021300          248 MDGIIDTVSAV---HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       248 ~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      ||+|+-.....   ..+..+.+.|+++|.++....
T Consensus       146 ~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~  180 (229)
T 2avd_A          146 FDVAVVDADKENCSAYYERCLQLLRPGGILAVLRV  180 (229)
T ss_dssp             EEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             ccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECC
Confidence            99988654432   247788899999999998654

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.44  E-value=0.0099  Score=53.12  Aligned_cols=89  Identities=20%  Similarity=0.325  Sum_probs=65.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc--
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--  259 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~--  259 (314)
                      -.|.++.|+|.|.+|...++.++.+|.+|++++++.++  +..+++|+..    .+.   .++....|+|+.++....  
T Consensus       148 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~--~~~~~~g~~~----~~l---~~~l~~aDvVil~vp~~~~t  218 (334)
T 2dbq_A          148 VYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE--EVERELNAEF----KPL---EDLLRESDFVVLAVPLTRET  218 (334)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH--HHHHHHCCEE----CCH---HHHHHHCSEEEECCCCCTTT
T ss_pred             CCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch--hhHhhcCccc----CCH---HHHHhhCCEEEECCCCChHH
Confidence            46789999999999999999999999999999988765  3334567532    122   233346899999986542  


Q ss_pred             --cH-HHHHHhhccCCEEEEEcC
Q 021300          260 --PL-MPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       260 --~~-~~~~~~l~~~G~~v~~G~  279 (314)
                        .+ ...+..|+++..++.++.
T Consensus       219 ~~~i~~~~~~~mk~~ailIn~sr  241 (334)
T 2dbq_A          219 YHLINEERLKLMKKTAILINIAR  241 (334)
T ss_dssp             TTCBCHHHHHHSCTTCEEEECSC
T ss_pred             HHhhCHHHHhcCCCCcEEEECCC
Confidence              22 456788899998988874

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.44  E-value=0.0087  Score=50.76  Aligned_cols=97  Identities=23%  Similarity=0.225  Sum_probs=64.7

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc--EEecCCCHHHHHHHcCCccEEEEc
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD--SFLVSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~--~~v~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      .++++.+||-+|+|. |..+..+++..+.+++.++.++...+.+.+.   .|..  .-+...+...... .+.||+|+-.
T Consensus        33 ~~~~~~~VLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~~  110 (256)
T 1nkv_A           33 RMKPGTRILDLGSGS-GEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAACV  110 (256)
T ss_dssp             CCCTTCEEEEETCTT-CHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEEE
T ss_pred             CCCCCCEEEEECCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEEEC
Confidence            368999999999876 7788889988899999999998776555333   3421  1121222111111 4579999852


Q ss_pred             cC------CcccHHHHHHhhccCCEEEEEc
Q 021300          255 VS------AVHPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       255 ~g------~~~~~~~~~~~l~~~G~~v~~G  278 (314)
                      -.      -...+..+.++|+++|++++.-
T Consensus       111 ~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A          111 GATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             SCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             CChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence            21      1234777888999999998863

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.43  E-value=0.03  Score=54.12  Aligned_cols=98  Identities=18%  Similarity=0.297  Sum_probs=64.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC-hhhHHHHHHHcCCcEEecCCCH-HH----HH---HHcCCccEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIERLGADSFLVSRDQ-DE----MQ---AAMGTMDGII  252 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~-~~~~~~~~~~~ga~~~v~~~~~-~~----~~---~~~~~~d~v~  252 (314)
                      .|.++||.|+ +++|.+.++.+...|++|++..+. .++..+..++.|.+.+....|. +.    +.   +..+.+|+++
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLV  400 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILV  400 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEE
Confidence            4678888887 999999999999999999887743 2222222344565554444444 21    22   2235799999


Q ss_pred             EccCCc-------------------------ccHHHHHHhhc--cCCEEEEEcCC
Q 021300          253 DTVSAV-------------------------HPLMPLIGLLK--SQGKLVLVGAP  280 (314)
Q Consensus       253 d~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~G~~  280 (314)
                      ++.|..                         .....++..|+  .+|+||.+++.
T Consensus       401 nNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~  455 (604)
T 2et6_A          401 NNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITST  455 (604)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCh
Confidence            999832                         12344566663  35899999874

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.43  E-value=0.0098  Score=50.79  Aligned_cols=69  Identities=19%  Similarity=0.166  Sum_probs=49.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE-EecCCCHHHHHHH-------cCCccEEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAA-------MGTMDGIID  253 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~-~v~~~~~~~~~~~-------~~~~d~v~d  253 (314)
                      .+.++||.|+ |++|.+.++.+...|++|+++.+++++.++      ... ..|-.+++.+.++       .+.+|++|+
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~------~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~   93 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG------FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIA   93 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc------ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4678999997 999999999999999999999987654321      221 1244555443322       246899999


Q ss_pred             ccCC
Q 021300          254 TVSA  257 (314)
Q Consensus       254 ~~g~  257 (314)
                      ++|.
T Consensus        94 nAg~   97 (253)
T 2nm0_A           94 NAGV   97 (253)
T ss_dssp             ECSC
T ss_pred             CCCC
Confidence            9874

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=96.41  E-value=0.012  Score=53.08  Aligned_cols=88  Identities=15%  Similarity=0.313  Sum_probs=66.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc---
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~---  259 (314)
                      .|.++.|+|.|.+|...++.++.+|.+|+++++... . +..+..|+..    .+   +.++....|+|+-++....   
T Consensus       175 ~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~-~-~~~~~~g~~~----~~---l~ell~~aDvV~l~~Plt~~T~  245 (365)
T 4hy3_A          175 AGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLP-R-SMLEENGVEP----AS---LEDVLTKSDFIFVVAAVTSENK  245 (365)
T ss_dssp             SSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSC-H-HHHHHTTCEE----CC---HHHHHHSCSEEEECSCSSCC--
T ss_pred             CCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCC-H-HHHhhcCeee----CC---HHHHHhcCCEEEEcCcCCHHHH
Confidence            488999999999999999999999999999988753 2 2334567642    12   3345567899998775321   


Q ss_pred             --cHHHHHHhhccCCEEEEEcC
Q 021300          260 --PLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       260 --~~~~~~~~l~~~G~~v~~G~  279 (314)
                        .-...+..|+++..++.++.
T Consensus       246 ~li~~~~l~~mk~gailIN~aR  267 (365)
T 4hy3_A          246 RFLGAEAFSSMRRGAAFILLSR  267 (365)
T ss_dssp             -CCCHHHHHTSCTTCEEEECSC
T ss_pred             hhcCHHHHhcCCCCcEEEECcC
Confidence              12567888999999999985

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=96.40  E-value=0.0088  Score=53.46  Aligned_cols=74  Identities=22%  Similarity=0.204  Sum_probs=52.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCcEE-ecCCCHHHHHHHcC--CccEEEEcc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADSF-LVSRDQDEMQAAMG--TMDGIIDTV  255 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----ga~~~-v~~~~~~~~~~~~~--~~d~v~d~~  255 (314)
                      +.+|||.|+ |.+|...++.+...|.+|+++++++.+...+.+.+    +...+ .|-.+++.+.++..  .+|+||.++
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   88 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA   88 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEECC
Confidence            578999997 99999999999989999999998765543333322    22222 34456665555544  489999999


Q ss_pred             CC
Q 021300          256 SA  257 (314)
Q Consensus       256 g~  257 (314)
                      +.
T Consensus        89 ~~   90 (357)
T 1rkx_A           89 AQ   90 (357)
T ss_dssp             SC
T ss_pred             CC
Confidence            84

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.39  E-value=0.0096  Score=52.00  Aligned_cols=87  Identities=22%  Similarity=0.279  Sum_probs=61.2

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHHHH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLI  265 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~  265 (314)
                      +|.|+|+|.+|...+..+...|.+|+++++++++.+++.+ .|...   ..+.+   +....+|+||.++.....+...+
T Consensus         7 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-~g~~~---~~~~~---~~~~~~D~vi~~v~~~~~~~~~~   79 (299)
T 1vpd_A            7 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-AGAET---ASTAK---AIAEQCDVIITMLPNSPHVKEVA   79 (299)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCEE---CSSHH---HHHHHCSEEEECCSSHHHHHHHH
T ss_pred             eEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-CCCee---cCCHH---HHHhCCCEEEEECCCHHHHHHHH
Confidence            6999999999999998888889999999999887766644 46432   22322   22235899999998654344444


Q ss_pred             -------HhhccCCEEEEEcC
Q 021300          266 -------GLLKSQGKLVLVGA  279 (314)
Q Consensus       266 -------~~l~~~G~~v~~G~  279 (314)
                             ..++++..++.++.
T Consensus        80 ~~~~~l~~~l~~~~~vv~~s~  100 (299)
T 1vpd_A           80 LGENGIIEGAKPGTVLIDMSS  100 (299)
T ss_dssp             HSTTCHHHHCCTTCEEEECSC
T ss_pred             hCcchHhhcCCCCCEEEECCC
Confidence                   45667777776643

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=96.38  E-value=0.011  Score=53.14  Aligned_cols=89  Identities=13%  Similarity=0.221  Sum_probs=65.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc-c-
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV-H-  259 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~-~-  259 (314)
                      -.|.++.|+|.|.+|...++.++.+|.+|+++++.+...+..   .++..+   .   .+.++....|+|+-++... . 
T Consensus       171 l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~---~g~~~~---~---~l~ell~~sDvV~l~~Plt~~T  241 (345)
T 4g2n_A          171 LTGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE---EGAIYH---D---TLDSLLGASDIFLIAAPGRPEL  241 (345)
T ss_dssp             CTTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH---TTCEEC---S---SHHHHHHTCSEEEECSCCCGGG
T ss_pred             cCCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh---cCCeEe---C---CHHHHHhhCCEEEEecCCCHHH
Confidence            357899999999999999999999999999999876443222   254321   1   2334455789999888632 1 


Q ss_pred             ---cHHHHHHhhccCCEEEEEcC
Q 021300          260 ---PLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       260 ---~~~~~~~~l~~~G~~v~~G~  279 (314)
                         .-...+..|+++..+|.++.
T Consensus       242 ~~li~~~~l~~mk~gailIN~aR  264 (345)
T 4g2n_A          242 KGFLDHDRIAKIPEGAVVINISR  264 (345)
T ss_dssp             TTCBCHHHHHHSCTTEEEEECSC
T ss_pred             HHHhCHHHHhhCCCCcEEEECCC
Confidence               12567888999999999986

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=96.36  E-value=0.023  Score=49.39  Aligned_cols=96  Identities=23%  Similarity=0.185  Sum_probs=66.2

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeCChhhHH-HHHHHcCCcEE-ecCCCHHHHHHHcCCccEEEEccCCcc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKS-EAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g-~~vi~v~~~~~~~~-~~~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~g~~~  259 (314)
                      ..+|||.|+ |.+|...++.+...| .+|+++++++++.. ...+..+...+ .|..+++.+.+...++|.||.+++...
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~   84 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWE   84 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCc
Confidence            468999998 999999998888778 89999999876532 22233455433 366777778787889999999987321


Q ss_pred             ---------cHHHHHHhhcc-C-CEEEEEcC
Q 021300          260 ---------PLMPLIGLLKS-Q-GKLVLVGA  279 (314)
Q Consensus       260 ---------~~~~~~~~l~~-~-G~~v~~G~  279 (314)
                               ....+++.++. + ++++..+.
T Consensus        85 ~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~  115 (299)
T 2wm3_A           85 SCSQEQEVKQGKLLADLARRLGLHYVVYSGL  115 (299)
T ss_dssp             HTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred             cccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence                     12344555543 2 57887654

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.36  E-value=0.046  Score=48.31  Aligned_cols=91  Identities=21%  Similarity=0.149  Sum_probs=65.6

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHcCC-cEEecCCCHHHHHH-HcCCccEEEEccCCcc-
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGA-DSFLVSRDQDEMQA-AMGTMDGIIDTVSAVH-  259 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~ga-~~~v~~~~~~~~~~-~~~~~d~v~d~~g~~~-  259 (314)
                      .+|.|+|.|.+|...++.++..|.  +|+++++++++.+.+ ++.|. +......     .+ .....|+||.++.... 
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a-~~~G~~~~~~~~~-----~~~~~~~aDvVilavp~~~~  107 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA-VDLGIIDEGTTSI-----AKVEDFSPDFVMLSSPVRTF  107 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH-HHTTSCSEEESCT-----TGGGGGCCSEEEECSCGGGH
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHH-HHCCCcchhcCCH-----HHHhhccCCEEEEeCCHHHH
Confidence            679999999999999999999998  999999998877665 46775 2332211     12 3457999999998654 


Q ss_pred             --cHHHHHHhhccCCEEEEEcCCC
Q 021300          260 --PLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       260 --~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                        .+......++++..++.+++..
T Consensus       108 ~~vl~~l~~~l~~~~iv~d~~Svk  131 (314)
T 3ggo_A          108 REIAKKLSYILSEDATVTDQGSVK  131 (314)
T ss_dssp             HHHHHHHHHHSCTTCEEEECCSCC
T ss_pred             HHHHHHHhhccCCCcEEEECCCCc
Confidence              2333445567777787777643

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=96.36  E-value=0.038  Score=50.82  Aligned_cols=77  Identities=14%  Similarity=0.072  Sum_probs=49.6

Q ss_pred             CCCCCEEEEEcC-ChHHHH--HHHHHHHCCCeEEEEeCCh---------------hhHHHHHHHcCCcEEe---cCCCHH
Q 021300          181 DKPGMHVGVVGL-GGLGHV--AVKFAKAMGVKVTVISTSP---------------SKKSEAIERLGADSFL---VSRDQD  239 (314)
Q Consensus       181 ~~~g~~vlI~Ga-g~vG~~--a~~~a~~~g~~vi~v~~~~---------------~~~~~~~~~~ga~~~v---~~~~~~  239 (314)
                      +..|.++||.|+ +++|.+  .+..+...|++|+++.++.               +...++.++.|.....   |-.+++
T Consensus        57 ~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~  136 (418)
T 4eue_A           57 FRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNE  136 (418)
T ss_dssp             CCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHH
Confidence            577889999997 999998  4444444599999988753               2333444566654322   444443


Q ss_pred             HHH-------HHcCCccEEEEccCC
Q 021300          240 EMQ-------AAMGTMDGIIDTVSA  257 (314)
Q Consensus       240 ~~~-------~~~~~~d~v~d~~g~  257 (314)
                      .+.       +..+.+|++++++|.
T Consensus       137 ~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          137 TKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCcc
Confidence            322       223479999999875

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.35  E-value=0.0037  Score=54.29  Aligned_cols=92  Identities=15%  Similarity=0.124  Sum_probs=65.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~  261 (314)
                      ..+.+++|+|+|.+|.+++..+...|++++++.+++++.+++.+++|.+ +.+  +   ..+....+|+|+.+++.....
T Consensus       127 ~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~-~~~--~---~~~~~~~aDiVi~atp~~~~~  200 (275)
T 2hk9_A          127 VKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLE-VVN--S---PEEVIDKVQVIVNTTSVGLKD  200 (275)
T ss_dssp             GGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEE-ECS--C---GGGTGGGCSEEEECSSTTSST
T ss_pred             cCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCe-eeh--h---HHhhhcCCCEEEEeCCCCCCC
Confidence            4578999999999999999999888999999999988877777777642 111  1   112334799999999754310


Q ss_pred             ---HH-HHHhhccCCEEEEEcC
Q 021300          262 ---MP-LIGLLKSQGKLVLVGA  279 (314)
Q Consensus       262 ---~~-~~~~l~~~G~~v~~G~  279 (314)
                         .. ....++++..++.++.
T Consensus       201 ~~~~~i~~~~l~~g~~viDv~~  222 (275)
T 2hk9_A          201 EDPEIFNYDLIKKDHVVVDIIY  222 (275)
T ss_dssp             TCCCSSCGGGCCTTSEEEESSS
T ss_pred             CCCCCCCHHHcCCCCEEEEcCC
Confidence               01 1345677777878766

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=96.34  E-value=0.007  Score=53.31  Aligned_cols=101  Identities=18%  Similarity=0.156  Sum_probs=66.3

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc--EEecCCCHHHHHHHcCCccEEE
Q 021300          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD--SFLVSRDQDEMQAAMGTMDGII  252 (314)
Q Consensus       178 ~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~--~~v~~~~~~~~~~~~~~~d~v~  252 (314)
                      ...++++++||-+|+|. |..+..+++..+++++.++.++...+.+.+.   .|..  .-+...+...+....+.||+|+
T Consensus       112 l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~  190 (312)
T 3vc1_A          112 LGQAGPDDTLVDAGCGR-GGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASW  190 (312)
T ss_dssp             SCCCCTTCEEEEESCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEE
T ss_pred             hccCCCCCEEEEecCCC-CHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEE
Confidence            33368899999999875 7778888887789999999998876555332   3421  2122222111111124799998


Q ss_pred             EccC-----CcccHHHHHHhhccCCEEEEEcC
Q 021300          253 DTVS-----AVHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       253 d~~g-----~~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      ..-.     -...+..+.+.|+++|++++...
T Consensus       191 ~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~  222 (312)
T 3vc1_A          191 NNESTMYVDLHDLFSEHSRFLKVGGRYVTITG  222 (312)
T ss_dssp             EESCGGGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ECCchhhCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence            6322     23357788899999999998754

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.33  E-value=0.016  Score=50.43  Aligned_cols=88  Identities=19%  Similarity=0.222  Sum_probs=60.9

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHHH
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  264 (314)
                      .+|.|+|.|.+|...++.+...|.+|+++++++++.+++. +.|+..   ..+..   +.....|+||.++.....+...
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~---~~~~~---~~~~~aDvvi~~vp~~~~~~~v   74 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELA-ALGAER---AATPC---EVVESCPVTFAMLADPAAAEEV   74 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH-HTTCEE---CSSHH---HHHHHCSEEEECCSSHHHHHHH
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-HCCCee---cCCHH---HHHhcCCEEEEEcCCHHHHHHH
Confidence            4788999999999999999999999999999988887765 446532   12221   2223478999888854334444


Q ss_pred             H-------HhhccCCEEEEEcC
Q 021300          265 I-------GLLKSQGKLVLVGA  279 (314)
Q Consensus       265 ~-------~~l~~~G~~v~~G~  279 (314)
                      +       ..++++..++.++.
T Consensus        75 ~~~~~~l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           75 CFGKHGVLEGIGEGRGYVDMST   96 (287)
T ss_dssp             HHSTTCHHHHCCTTCEEEECSC
T ss_pred             HcCcchHhhcCCCCCEEEeCCC
Confidence            4       45566666666643

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.32  E-value=0.015  Score=49.50  Aligned_cols=99  Identities=13%  Similarity=0.093  Sum_probs=66.2

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCChhhHHHHHHH---cCCc--EEecCCCH-HHHHHHcC--CccE
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIER---LGAD--SFLVSRDQ-DEMQAAMG--TMDG  250 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~--g~~vi~v~~~~~~~~~~~~~---~ga~--~~v~~~~~-~~~~~~~~--~~d~  250 (314)
                      ..++.+||-+|+|. |..+..+++..  +.+++.++.+++..+.+.+.   .|..  .-+...+. +.+....+  .||+
T Consensus        61 ~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~  139 (248)
T 3tfw_A           61 LTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDL  139 (248)
T ss_dssp             HHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSE
T ss_pred             hcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEE
Confidence            46778999999875 78888888876  56999999998766555433   3532  22223333 33444433  7999


Q ss_pred             EEEccCCc---ccHHHHHHhhccCCEEEEEcCC
Q 021300          251 IIDTVSAV---HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       251 v~d~~g~~---~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      |+-.....   ..+..+.+.|++||.++.-...
T Consensus       140 V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~~  172 (248)
T 3tfw_A          140 IFIDADKPNNPHYLRWALRYSRPGTLIIGDNVV  172 (248)
T ss_dssp             EEECSCGGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred             EEECCchHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence            99543322   2477788999999999876543

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=96.32  E-value=0.0067  Score=54.22  Aligned_cols=112  Identities=20%  Similarity=0.163  Sum_probs=73.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc--
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--  259 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~--  259 (314)
                      -.|.++.|+|.|.+|...++.++.+|++|+++++..++.  + +++ ++. .  .+   +.++....|+|+.++....  
T Consensus       144 l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~-~~~-~--~~---l~ell~~aDvV~l~~p~~~~t  213 (333)
T 1j4a_A          144 VRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--L-EKK-GYY-V--DS---LDDLYKQADVISLHVPDVPAN  213 (333)
T ss_dssp             GGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--H-HHT-TCB-C--SC---HHHHHHHCSEEEECSCCCGGG
T ss_pred             CCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--H-Hhh-Cee-c--CC---HHHHHhhCCEEEEcCCCcHHH
Confidence            357899999999999999999999999999999877543  2 333 321 1  12   2234446899999987432  


Q ss_pred             --cH-HHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeeeccc
Q 021300          260 --PL-MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWWQHD  304 (314)
Q Consensus       260 --~~-~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~~~~  304 (314)
                        .+ ...+..|++++.++.++.. +...-....-..++.++.+-..+
T Consensus       214 ~~li~~~~l~~mk~ga~lIn~arg-~~vd~~aL~~aL~~g~i~gA~LD  260 (333)
T 1j4a_A          214 VHMINDESIAKMKQDVVIVNVSRG-PLVDTDAVIRGLDSGKIFGYAMD  260 (333)
T ss_dssp             TTCBSHHHHHHSCTTEEEEECSCG-GGBCHHHHHHHHHHTSEEEEEES
T ss_pred             HHHHhHHHHhhCCCCcEEEECCCC-cccCHHHHHHHHHhCCceEEEEe
Confidence              12 4577889999999999873 32333333333344445433333

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.32  E-value=0.012  Score=49.53  Aligned_cols=73  Identities=15%  Similarity=0.140  Sum_probs=52.0

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHHc-CCcE---EecCCCHHHHHHHc-------C--C
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERL-GADS---FLVSRDQDEMQAAM-------G--T  247 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~~~-ga~~---~v~~~~~~~~~~~~-------~--~  247 (314)
                      +.++||.|+ |.+|...++.+...|  ++|+++.++.++.+++. ++ +...   ..|-.+++.+.++.       +  +
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK-SIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH-TCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHH-hccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            568999987 999999999999899  99999999987765553 33 3221   12444444333322       2  7


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++|.++|.
T Consensus        82 id~li~~Ag~   91 (250)
T 1yo6_A           82 LSLLINNAGV   91 (250)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCcc
Confidence            9999999874

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.31  E-value=0.01  Score=50.69  Aligned_cols=86  Identities=15%  Similarity=0.263  Sum_probs=63.2

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHHH
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  264 (314)
                      .+|.|+|+|.+|...+..+...|..|.++++++++.+++.+++|...   ..+.+   +....+|+|+.++... .....
T Consensus         4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~~~~~---~~~~~~D~Vi~~v~~~-~~~~v   76 (259)
T 2ahr_A            4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY---AMSHQ---DLIDQVDLVILGIKPQ-LFETV   76 (259)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB---CSSHH---HHHHTCSEEEECSCGG-GHHHH
T ss_pred             cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe---eCCHH---HHHhcCCEEEEEeCcH-hHHHH
Confidence            36899999999999888888788889899999888878877777542   22322   2223689999999854 46777


Q ss_pred             HHhhccCCEEEEE
Q 021300          265 IGLLKSQGKLVLV  277 (314)
Q Consensus       265 ~~~l~~~G~~v~~  277 (314)
                      +..++++..++..
T Consensus        77 ~~~l~~~~~vv~~   89 (259)
T 2ahr_A           77 LKPLHFKQPIISM   89 (259)
T ss_dssp             HTTSCCCSCEEEC
T ss_pred             HHHhccCCEEEEe
Confidence            7777766655555

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=96.31  E-value=0.022  Score=49.65  Aligned_cols=92  Identities=17%  Similarity=0.242  Sum_probs=62.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh------hhHHHHH--HHcCCcEE-ecCCCHHHHHHHcCCccEEEE
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP------SKKSEAI--ERLGADSF-LVSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~------~~~~~~~--~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d  253 (314)
                      ..+|+|.|+ |.+|...++.+...|.+|++++|+.      ++...+.  +..+...+ .|..+++.+.++..++|+||.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~   83 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   83 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence            357999998 9999999999998999999999873      2222121  22355433 355667777777778999999


Q ss_pred             ccCCc--ccHHHHHHhhccC---CEEE
Q 021300          254 TVSAV--HPLMPLIGLLKSQ---GKLV  275 (314)
Q Consensus       254 ~~g~~--~~~~~~~~~l~~~---G~~v  275 (314)
                      +++..  .....+++.++..   .+++
T Consensus        84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (308)
T 1qyc_A           84 TVGSLQIESQVNIIKAIKEVGTVKRFF  110 (308)
T ss_dssp             CCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred             CCcchhhhhHHHHHHHHHhcCCCceEe
Confidence            98853  2244555555443   4666

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.30  E-value=0.046  Score=47.87  Aligned_cols=89  Identities=21%  Similarity=0.330  Sum_probs=62.0

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHHH
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  264 (314)
                      .+|.|+|.|.+|...+..+...|.+|+++++++++.+++. +.|......+.     .+.....|+||.++.....+...
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~~~~~-----~e~~~~aDvvi~~vp~~~~~~~v   81 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLL-AEGACGAAASA-----REFAGVVDALVILVVNAAQVRQV   81 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSEEESSS-----TTTTTTCSEEEECCSSHHHHHHH
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH-HcCCccccCCH-----HHHHhcCCEEEEECCCHHHHHHH
Confidence            5799999999999999999989999999999998887765 45765422111     12334688999888875334444


Q ss_pred             H-------HhhccCCEEEEEcC
Q 021300          265 I-------GLLKSQGKLVLVGA  279 (314)
Q Consensus       265 ~-------~~l~~~G~~v~~G~  279 (314)
                      +       ..++++..++.++.
T Consensus        82 ~~~~~~l~~~l~~g~ivv~~st  103 (303)
T 3g0o_A           82 LFGEDGVAHLMKPGSAVMVSST  103 (303)
T ss_dssp             HC--CCCGGGSCTTCEEEECSC
T ss_pred             HhChhhHHhhCCCCCEEEecCC
Confidence            3       34455666665543

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=96.29  E-value=0.0038  Score=52.84  Aligned_cols=88  Identities=22%  Similarity=0.274  Sum_probs=56.3

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHc----CCccEEEEccCCcc-
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVH-  259 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~----~~~d~v~d~~g~~~-  259 (314)
                      ++||.|+ |.+|...+..+...|++|+++++++++..       .....|-.+++.+.++.    +++|++|+++|... 
T Consensus         3 ~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~   75 (255)
T 2dkn_A            3 VIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-------ADLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGVT   75 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-------CCTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCCTT
T ss_pred             EEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-------ccccCCcccHHHHHHHHHHcCCCccEEEECCCCCCc
Confidence            6899998 99999999998889999999998765321       01001112222333322    58999999987432 


Q ss_pred             -----------------cHHHHHHhhcc--CCEEEEEcCC
Q 021300          260 -----------------PLMPLIGLLKS--QGKLVLVGAP  280 (314)
Q Consensus       260 -----------------~~~~~~~~l~~--~G~~v~~G~~  280 (314)
                                       .+..+.+.++.  .++++.+++.
T Consensus        76 ~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~  115 (255)
T 2dkn_A           76 AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSI  115 (255)
T ss_dssp             SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecc
Confidence                             12233334433  3899999775

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=96.27  E-value=0.0091  Score=53.68  Aligned_cols=92  Identities=18%  Similarity=0.313  Sum_probs=65.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHH-HCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc-
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-  259 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~-~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~-  259 (314)
                      -.|.++.|+|.|.+|...++.++ .+|.+|+++++++.+.+.. +++|+..+   .+.   .++....|+|+.++.... 
T Consensus       161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~-~~~g~~~~---~~l---~ell~~aDvVil~vp~~~~  233 (348)
T 2w2k_A          161 PRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETE-KALGAERV---DSL---EELARRSDCVSVSVPYMKL  233 (348)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHH-HHHTCEEC---SSH---HHHHHHCSEEEECCCCSGG
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhH-hhcCcEEe---CCH---HHHhccCCEEEEeCCCChH
Confidence            56889999999999999999999 9999999998886655433 45575431   122   223345899999886431 


Q ss_pred             ---cH-HHHHHhhccCCEEEEEcCC
Q 021300          260 ---PL-MPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       260 ---~~-~~~~~~l~~~G~~v~~G~~  280 (314)
                         .+ ...+..|+++..++.++..
T Consensus       234 t~~li~~~~l~~mk~gailin~srg  258 (348)
T 2w2k_A          234 THHLIDEAFFAAMKPGSRIVNTARG  258 (348)
T ss_dssp             GTTCBCHHHHHHSCTTEEEEECSCG
T ss_pred             HHHHhhHHHHhcCCCCCEEEECCCC
Confidence               12 3567788888888877663

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=96.27  E-value=0.0059  Score=54.52  Aligned_cols=90  Identities=17%  Similarity=0.201  Sum_probs=65.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc----
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV----  258 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  258 (314)
                      .|.++.|+|.|.+|...++.++.+|++|+++.+.+.... ..+.+|+..    .+   +.++....|+|+-++...    
T Consensus       144 ~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~~~~g~~~----~~---l~ell~~aDvV~l~~P~t~~t~  215 (330)
T 4e5n_A          144 DNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQ-TEQRLGLRQ----VA---CSELFASSDFILLALPLNADTL  215 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHH-HHHHHTEEE----CC---HHHHHHHCSEEEECCCCSTTTT
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHh-HHHhcCcee----CC---HHHHHhhCCEEEEcCCCCHHHH
Confidence            588999999999999999999999999999988764332 234556532    12   223444589999887632    


Q ss_pred             -ccHHHHHHhhccCCEEEEEcCC
Q 021300          259 -HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       259 -~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                       ..-...+..|+++..++.++..
T Consensus       216 ~li~~~~l~~mk~gailIN~arg  238 (330)
T 4e5n_A          216 HLVNAELLALVRPGALLVNPCRG  238 (330)
T ss_dssp             TCBCHHHHTTSCTTEEEEECSCG
T ss_pred             HHhCHHHHhhCCCCcEEEECCCC
Confidence             1124678889999999999863

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=96.25  E-value=0.013  Score=53.09  Aligned_cols=74  Identities=9%  Similarity=0.112  Sum_probs=54.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHHcCCccEEEEccCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      .+.+|||.|+ |.+|...++.+...|.+|+++++.+.+.... ...+...+ .|-.+++.+.++..++|+||.+++.
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~  103 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-DMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAAD  103 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-GGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-ccCCceEEECCCCCHHHHHHHhCCCCEEEECcee
Confidence            3568999998 9999999999888899999999876543211 11233322 3556667777777899999999874

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=96.24  E-value=0.011  Score=48.70  Aligned_cols=95  Identities=15%  Similarity=0.084  Sum_probs=60.4

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC-----------------cEEecCCCHHHHHH
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-----------------DSFLVSRDQDEMQA  243 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga-----------------~~~v~~~~~~~~~~  243 (314)
                      +.++.+||.+|+|. |..+..+++. |++|+.++.++...+.+.++.+.                 -.++..+-.+....
T Consensus        20 ~~~~~~vLD~GCG~-G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~   97 (203)
T 1pjz_A           20 VVPGARVLVPLCGK-SQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR   97 (203)
T ss_dssp             CCTTCEEEETTTCC-SHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred             cCCCCEEEEeCCCC-cHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence            57889999999864 6677777776 88999999999888777665431                 11111111111001


Q ss_pred             HcCCccEEEEccCCc--------ccHHHHHHhhccCCEEEEE
Q 021300          244 AMGTMDGIIDTVSAV--------HPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       244 ~~~~~d~v~d~~g~~--------~~~~~~~~~l~~~G~~v~~  277 (314)
                      ..+.||+|++...-.        ..+..+.+.|++||+++++
T Consensus        98 ~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~  139 (203)
T 1pjz_A           98 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI  139 (203)
T ss_dssp             HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred             cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            114799999743211        1356788899999993333

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.22  E-value=0.013  Score=51.85  Aligned_cols=91  Identities=13%  Similarity=0.157  Sum_probs=62.3

Q ss_pred             CEEEEEcCChHHHHHHHHHHH-C-CCeEEEEeC-Chhh-HHHHHHHcCCcEEecCCCHHHHHHHc--CCccEEEEccCCc
Q 021300          185 MHVGVVGLGGLGHVAVKFAKA-M-GVKVTVIST-SPSK-KSEAIERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAV  258 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~-~-g~~vi~v~~-~~~~-~~~~~~~~ga~~~v~~~~~~~~~~~~--~~~d~v~d~~g~~  258 (314)
                      -+|.|+|+|.+|...+..+.. . +.+++.+.+ ++++ ..++.+++|....  +.+.+.+.+..  .++|+||++++..
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~--~~~~e~ll~~~~~~~iDvV~~atp~~   82 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTT--YAGVEGLIKLPEFADIDFVFDATSAS   82 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEE--SSHHHHHHHSGGGGGEEEEEECSCHH
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcc--cCCHHHHHhccCCCCCcEEEECCChH
Confidence            468999999999988888843 4 666665554 4455 4677778887532  23333332221  3699999999977


Q ss_pred             ccHHHHHHhhcc--CCEEEEE
Q 021300          259 HPLMPLIGLLKS--QGKLVLV  277 (314)
Q Consensus       259 ~~~~~~~~~l~~--~G~~v~~  277 (314)
                      .....+..+++.  |..++..
T Consensus        83 ~h~~~a~~al~a~~Gk~Vi~e  103 (312)
T 1nvm_B           83 AHVQNEALLRQAKPGIRLIDL  103 (312)
T ss_dssp             HHHHHHHHHHHHCTTCEEEEC
T ss_pred             HHHHHHHHHHHhCCCCEEEEc
Confidence            667778888887  7777663

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=96.22  E-value=0.0042  Score=52.81  Aligned_cols=104  Identities=14%  Similarity=0.083  Sum_probs=67.9

Q ss_pred             hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc--EEecCCCHHHHHHHcCCc
Q 021300          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD--SFLVSRDQDEMQAAMGTM  248 (314)
Q Consensus       174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~--~~v~~~~~~~~~~~~~~~  248 (314)
                      .+.....++++++||-+|+|. |..+..+++..+.+++.++.++.....+.+.   .|..  .-+...+...+....+.|
T Consensus        37 ~l~~l~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f  115 (257)
T 3f4k_A           37 AVSFINELTDDAKIADIGCGT-GGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEEL  115 (257)
T ss_dssp             HHTTSCCCCTTCEEEEETCTT-SHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCE
T ss_pred             HHHHHhcCCCCCeEEEeCCCC-CHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCE
Confidence            344444578899999999875 8888899998877999999998766554333   3421  212222211111112469


Q ss_pred             cEEEEccC-----CcccHHHHHHhhccCCEEEEEc
Q 021300          249 DGIIDTVS-----AVHPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       249 d~v~d~~g-----~~~~~~~~~~~l~~~G~~v~~G  278 (314)
                      |+|+-...     -...+..+.+.|+++|++++..
T Consensus       116 D~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~  150 (257)
T 3f4k_A          116 DLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE  150 (257)
T ss_dssp             EEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             EEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence            99875422     2234777888999999998875

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=96.20  E-value=0.034  Score=49.46  Aligned_cols=92  Identities=18%  Similarity=0.236  Sum_probs=64.5

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh----hhHHHH--HHHcCCcEE-ecCCCHHHHHHHcC--CccEEEEc
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP----SKKSEA--IERLGADSF-LVSRDQDEMQAAMG--TMDGIIDT  254 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~----~~~~~~--~~~~ga~~~-v~~~~~~~~~~~~~--~~d~v~d~  254 (314)
                      .+|||.|+ |.+|...++.+...|.+|++++|++    ++...+  .+..+...+ .|..+++.+.++..  ++|+||.+
T Consensus        11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~   90 (346)
T 3i6i_A           11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVST   90 (346)
T ss_dssp             CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEEC
Confidence            57999998 9999999999998999999999976    333221  123455433 35566777777666  89999999


Q ss_pred             cCCc--ccHHHHHHhhccCC---EEEE
Q 021300          255 VSAV--HPLMPLIGLLKSQG---KLVL  276 (314)
Q Consensus       255 ~g~~--~~~~~~~~~l~~~G---~~v~  276 (314)
                      ++..  .....+++.++..|   +++.
T Consensus        91 a~~~n~~~~~~l~~aa~~~g~v~~~v~  117 (346)
T 3i6i_A           91 VGGESILDQIALVKAMKAVGTIKRFLP  117 (346)
T ss_dssp             CCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred             CchhhHHHHHHHHHHHHHcCCceEEee
Confidence            9853  23455666666555   5553

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=96.20  E-value=0.039  Score=48.89  Aligned_cols=75  Identities=20%  Similarity=0.112  Sum_probs=51.1

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh----------hHHHHHHHcC--CcEE-ecCCCHHHHHHHcC--C
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS----------KKSEAIERLG--ADSF-LVSRDQDEMQAAMG--T  247 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~----------~~~~~~~~~g--a~~~-v~~~~~~~~~~~~~--~  247 (314)
                      +.+|||.|+ |.+|...++.+...|.+|+++++...          ...++.+..+  ...+ .|-.+++.+.++..  +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            368999997 99999999988888999999986432          2223322123  2222 34456666655544  7


Q ss_pred             ccEEEEccCCc
Q 021300          248 MDGIIDTVSAV  258 (314)
Q Consensus       248 ~d~v~d~~g~~  258 (314)
                      +|+||.+++..
T Consensus        82 ~d~vih~A~~~   92 (348)
T 1ek6_A           82 FMAVIHFAGLK   92 (348)
T ss_dssp             EEEEEECCSCC
T ss_pred             CCEEEECCCCc
Confidence            99999998853

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.19  E-value=0.0094  Score=52.79  Aligned_cols=88  Identities=19%  Similarity=0.317  Sum_probs=60.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc-c--
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV-H--  259 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~-~--  259 (314)
                      .|.++.|+|.|.+|...++.++.+|.+|+++.++++..      -+.+...   ..+.+.++....|+|+-++... .  
T Consensus       138 ~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~------~~~~~~~---~~~~l~ell~~aDiV~l~~Plt~~t~  208 (315)
T 3pp8_A          138 EEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSW------PGVESYV---GREELRAFLNQTRVLINLLPNTAQTV  208 (315)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCC------TTCEEEE---SHHHHHHHHHTCSEEEECCCCCGGGT
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhh------hhhhhhc---ccCCHHHHHhhCCEEEEecCCchhhh
Confidence            58899999999999999999999999999998876532      1222221   1234445555678877776522 1  


Q ss_pred             -cH-HHHHHhhccCCEEEEEcC
Q 021300          260 -PL-MPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       260 -~~-~~~~~~l~~~G~~v~~G~  279 (314)
                       .+ ...+..|+++..++.+|.
T Consensus       209 ~li~~~~l~~mk~gailIN~aR  230 (315)
T 3pp8_A          209 GIINSELLDQLPDGAYVLNLAR  230 (315)
T ss_dssp             TCBSHHHHTTSCTTEEEEECSC
T ss_pred             hhccHHHHhhCCCCCEEEECCC
Confidence             12 456677777777777765

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.17  E-value=0.012  Score=48.38  Aligned_cols=100  Identities=14%  Similarity=0.026  Sum_probs=65.8

Q ss_pred             hcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC-cEEecCCCHHHHHHHcCCccEEEEcc
Q 021300          177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-DSFLVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       177 ~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga-~~~v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      ....++++.+||-+|+|. |..+..+++. +.+++.++.++...+.+. +.+. ..-+...+.... ...+.||+|+-..
T Consensus        40 ~l~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~~v~~~D~s~~~~~~a~-~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~  115 (218)
T 3ou2_A           40 RLRAGNIRGDVLELASGT-GYWTRHLSGL-ADRVTALDGSAEMIAEAG-RHGLDNVEFRQQDLFDW-TPDRQWDAVFFAH  115 (218)
T ss_dssp             HHTTTTSCSEEEEESCTT-SHHHHHHHHH-SSEEEEEESCHHHHHHHG-GGCCTTEEEEECCTTSC-CCSSCEEEEEEES
T ss_pred             HHhcCCCCCeEEEECCCC-CHHHHHHHhc-CCeEEEEeCCHHHHHHHH-hcCCCCeEEEecccccC-CCCCceeEEEEec
Confidence            334467888999999865 7777777777 889999999988775554 3452 221222221111 2234799998654


Q ss_pred             CC--------cccHHHHHHhhccCCEEEEEcCC
Q 021300          256 SA--------VHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       256 g~--------~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      .-        ...+..+.+.|+++|+++.....
T Consensus       116 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  148 (218)
T 3ou2_A          116 WLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT  148 (218)
T ss_dssp             CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             hhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence            31        23467788899999999888543

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=96.15  E-value=0.018  Score=47.98  Aligned_cols=96  Identities=22%  Similarity=0.253  Sum_probs=62.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHHcCC--c-EEecC--CCHHHHHHHcCCccEEEE
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERLGA--D-SFLVS--RDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~~~ga--~-~~v~~--~~~~~~~~~~~~~d~v~d  253 (314)
                      ++++++||-+|+|. |..+..+++..|  .+++.++.++...+.+.+....  . .++..  .+........+.||+|+-
T Consensus        71 ~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~  149 (227)
T 1g8a_A           71 IKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFE  149 (227)
T ss_dssp             CCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred             CCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEE
Confidence            68899999999876 778888888754  6899999998755444333221  1 12211  111111122347999997


Q ss_pred             ccCCcc----cHHHHHHhhccCCEEEEE
Q 021300          254 TVSAVH----PLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       254 ~~g~~~----~~~~~~~~l~~~G~~v~~  277 (314)
                      ......    .+..+.+.|+++|+++..
T Consensus       150 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~  177 (227)
T 1g8a_A          150 DVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence            655332    267788999999999887

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.15  E-value=0.023  Score=50.61  Aligned_cols=90  Identities=18%  Similarity=0.251  Sum_probs=64.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc---
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---  258 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---  258 (314)
                      -.|.+|.|+|.|.+|...++.++.+|.+|++++++.++.+.+ +++|....    +.   .++....|+|+.++...   
T Consensus       153 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~-~~~g~~~~----~l---~e~l~~aDvVi~~vp~~~~t  224 (330)
T 2gcg_A          153 LTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEA-AEFQAEFV----ST---PELAAQSDFIVVACSLTPAT  224 (330)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHH-HTTTCEEC----CH---HHHHHHCSEEEECCCCCTTT
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHH-HhcCceeC----CH---HHHHhhCCEEEEeCCCChHH
Confidence            357899999999999999999999999999999876655443 45565321    22   22334589999988643   


Q ss_pred             -ccH-HHHHHhhccCCEEEEEcC
Q 021300          259 -HPL-MPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       259 -~~~-~~~~~~l~~~G~~v~~G~  279 (314)
                       ..+ ...+..|+++..++.++.
T Consensus       225 ~~~i~~~~~~~mk~gailIn~sr  247 (330)
T 2gcg_A          225 EGLCNKDFFQKMKETAVFINISR  247 (330)
T ss_dssp             TTCBSHHHHHHSCTTCEEEECSC
T ss_pred             HHhhCHHHHhcCCCCcEEEECCC
Confidence             122 456778888888887765

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=96.14  E-value=0.011  Score=52.69  Aligned_cols=88  Identities=23%  Similarity=0.311  Sum_probs=63.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc---
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---  258 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---  258 (314)
                      -.|.+|.|+|.|.+|...++.++.+|.+|+++++++++  +..+++|+..  .  +.   .++....|+|+.++...   
T Consensus       144 l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~--~~~~~~g~~~--~--~l---~e~l~~aDiVil~vp~~~~t  214 (333)
T 2d0i_A          144 LYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV--NVEKELKARY--M--DI---DELLEKSDIVILALPLTRDT  214 (333)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH--HHHHHHTEEE--C--CH---HHHHHHCSEEEECCCCCTTT
T ss_pred             CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch--hhhhhcCcee--c--CH---HHHHhhCCEEEEcCCCChHH
Confidence            46789999999999999999999999999999988765  3334556432  1  22   22334689999988754   


Q ss_pred             -ccH-HHHHHhhccCCEEEEEcC
Q 021300          259 -HPL-MPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       259 -~~~-~~~~~~l~~~G~~v~~G~  279 (314)
                       ..+ ...+..|+++ .++.++.
T Consensus       215 ~~~i~~~~~~~mk~g-ilin~sr  236 (333)
T 2d0i_A          215 YHIINEERVKKLEGK-YLVNIGR  236 (333)
T ss_dssp             TTSBCHHHHHHTBTC-EEEECSC
T ss_pred             HHHhCHHHHhhCCCC-EEEECCC
Confidence             122 3457788888 7777764

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.14  E-value=0.041  Score=43.92  Aligned_cols=95  Identities=22%  Similarity=0.213  Sum_probs=64.1

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCC--cEEecCCCHHHHHHHc--CCccEEEE
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGA--DSFLVSRDQDEMQAAM--GTMDGIID  253 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga--~~~v~~~~~~~~~~~~--~~~d~v~d  253 (314)
                      +.++++||-+|+|. |..+..+++.. .+++.++.++...+.+.+.   .+.  ..-+...+...  ...  +.||+|+.
T Consensus        31 ~~~~~~vldiG~G~-G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~D~v~~  106 (192)
T 1l3i_A           31 PGKNDVAVDVGCGT-GGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE--ALCKIPDIDIAVV  106 (192)
T ss_dssp             CCTTCEEEEESCTT-SHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH--HHTTSCCEEEEEE
T ss_pred             CCCCCEEEEECCCC-CHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH--hcccCCCCCEEEE
Confidence            68899999999876 77888887766 8999999988766555432   343  22222233222  222  47999996


Q ss_pred             ccCC---cccHHHHHHhhccCCEEEEEcC
Q 021300          254 TVSA---VHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       254 ~~g~---~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      ....   ...+..+.+.|+++|+++....
T Consensus       107 ~~~~~~~~~~l~~~~~~l~~gG~l~~~~~  135 (192)
T 1l3i_A          107 GGSGGELQEILRIIKDKLKPGGRIIVTAI  135 (192)
T ss_dssp             SCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             CCchHHHHHHHHHHHHhcCCCcEEEEEec
Confidence            5431   2346677888999999988754

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.14  E-value=0.017  Score=49.51  Aligned_cols=87  Identities=16%  Similarity=0.175  Sum_probs=61.4

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHH
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP  263 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~  263 (314)
                      .+|.|+|+|.+|...++.+...|.+ +.++++++++.+++.+.+|....   .+.   .+....+|+|+.++.... ...
T Consensus        11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~---~~~---~~~~~~~Dvvi~av~~~~-~~~   83 (266)
T 3d1l_A           11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYT---TDL---AEVNPYAKLYIVSLKDSA-FAE   83 (266)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEE---SCG---GGSCSCCSEEEECCCHHH-HHH
T ss_pred             CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCcee---CCH---HHHhcCCCEEEEecCHHH-HHH
Confidence            4699999999999988888877887 78888998888888777776432   121   123357999999998764 454


Q ss_pred             HHHhh----ccCCEEEEEc
Q 021300          264 LIGLL----KSQGKLVLVG  278 (314)
Q Consensus       264 ~~~~l----~~~G~~v~~G  278 (314)
                      .++.+    +++..++.+.
T Consensus        84 v~~~l~~~~~~~~ivv~~s  102 (266)
T 3d1l_A           84 LLQGIVEGKREEALMVHTA  102 (266)
T ss_dssp             HHHHHHTTCCTTCEEEECC
T ss_pred             HHHHHHhhcCCCcEEEECC
Confidence            44443    3455555554

>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}

Probab=96.13  E-value=0.0037  Score=56.71  Aligned_cols=134  Identities=13%  Similarity=0.062  Sum_probs=82.7

Q ss_pred             chhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCh-------hhHHHHHHHcCCcEEec-C
Q 021300          165 LCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP-------SKKSEAIERLGADSFLV-S  235 (314)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~-------~~~~~~~~~~ga~~~v~-~  235 (314)
                      .+.+.+-+.+++..+.--+..+|+|+|+|..|..+++++..+|+ +++++++.-       ++...+.+.|..+  .+ .
T Consensus       169 ~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~--~~~~  246 (398)
T 2a9f_A          169 IVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKV--TNRE  246 (398)
T ss_dssp             HHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHH--HSCT
T ss_pred             HHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhc--cCcc
Confidence            33444555666655544466889999999999999999999999 888888752       1111221111110  00 0


Q ss_pred             CCHHHHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeeec
Q 021300          236 RDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWWQ  302 (314)
Q Consensus       236 ~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~~  302 (314)
                      .....+.+...++|++|-+++.....+..++.|+++-.++.+..+.  .++...+.+.-+..|.-.+
T Consensus       247 ~~~~~L~eav~~ADV~IG~Sapgl~T~EmVk~Ma~~pIIfalsNPt--~E~~pe~a~~~g~~i~atG  311 (398)
T 2a9f_A          247 FKSGTLEDALEGADIFIGVSAPGVLKAEWISKMAARPVIFAMANPI--PEIYPDEALEAGAYIVGTG  311 (398)
T ss_dssp             TCCCSCSHHHHTTCSEEECCSTTCCCHHHHHTSCSSCEEEECCSSS--CSSCHHHHHTTTCSEEEES
T ss_pred             cchhhHHHHhccCCEEEecCCCCCCCHHHHHhhCCCCEEEECCCCC--ccCCHHHHHHhCCeEEEeC
Confidence            0011122223357999998875555788999999999988888765  2555555554444454333

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=96.12  E-value=0.015  Score=52.56  Aligned_cols=97  Identities=21%  Similarity=0.138  Sum_probs=64.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHH-HcCCcEE-ecCCCHHHHHHHcCCccEEEEccCCcc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIE-RLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~-~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~g~~~  259 (314)
                      +.+|||.|+ |.+|...++.+...| .+|+++++.+....+..+ .-+...+ .|-.+++.+.++..++|+||.+++...
T Consensus        32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~~~  111 (377)
T 2q1s_A           32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATYHG  111 (377)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCCSC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCccC
Confidence            568999998 999999999999899 999999887653211111 0112221 244556777777779999999988532


Q ss_pred             -----------------cHHHHHHhhccC---CEEEEEcCC
Q 021300          260 -----------------PLMPLIGLLKSQ---GKLVLVGAP  280 (314)
Q Consensus       260 -----------------~~~~~~~~l~~~---G~~v~~G~~  280 (314)
                                       ....+++.++..   +++|.+++.
T Consensus       112 ~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~  152 (377)
T 2q1s_A          112 NQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAG  152 (377)
T ss_dssp             HHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC
T ss_pred             chhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCH
Confidence                             123344555543   488888663

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=96.09  E-value=0.031  Score=49.74  Aligned_cols=74  Identities=14%  Similarity=0.097  Sum_probs=54.0

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh----hHHHHHHHc------CCcEE-ecCCCHHHHHHHcCCccEE
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS----KKSEAIERL------GADSF-LVSRDQDEMQAAMGTMDGI  251 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~----~~~~~~~~~------ga~~~-v~~~~~~~~~~~~~~~d~v  251 (314)
                      +.+|||.|+ |.+|...++.+...|.+|+++++.+.    ...++.+.+      +...+ .|-.+++.+.++..++|+|
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v  106 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYV  106 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCEE
Confidence            568999998 99999999999989999999998653    233333322      22222 2555667777777799999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      |.+++.
T Consensus       107 ih~A~~  112 (352)
T 1sb8_A          107 LHQAAL  112 (352)
T ss_dssp             EECCSC
T ss_pred             EECCcc
Confidence            999984

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=96.09  E-value=0.026  Score=48.29  Aligned_cols=71  Identities=14%  Similarity=0.188  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE-EecCCCHHHHHHH-------cCCccEEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAA-------MGTMDGIID  253 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~-~v~~~~~~~~~~~-------~~~~d~v~d  253 (314)
                      .+.++||.|+ |++|.+.++.+...|++|+++.++.++...    ..... ..|-.+++.+.++       .+++|++|+
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~  102 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD----PDIHTVAGDISKPETADRIVREGIERFGRIDSLVN  102 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS----TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            4678999987 999999999999999999999988654311    12221 1244555443332       247999999


Q ss_pred             ccCC
Q 021300          254 TVSA  257 (314)
Q Consensus       254 ~~g~  257 (314)
                      ++|.
T Consensus       103 nAg~  106 (260)
T 3un1_A          103 NAGV  106 (260)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9874

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.08  E-value=0.022  Score=50.22  Aligned_cols=89  Identities=21%  Similarity=0.230  Sum_probs=61.0

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHH
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP  263 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~  263 (314)
                      -.+|.|+|.|.+|...++.+...|.+|+++++++++.+++. +.|+..   ..+..   +.....|+||-++.....+..
T Consensus        21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~-~~g~~~---~~~~~---~~~~~aDvvi~~vp~~~~~~~   93 (310)
T 3doj_A           21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELV-EHGASV---CESPA---EVIKKCKYTIAMLSDPCAALS   93 (310)
T ss_dssp             SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH-HTTCEE---CSSHH---HHHHHCSEEEECCSSHHHHHH
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HCCCeE---cCCHH---HHHHhCCEEEEEcCCHHHHHH
Confidence            36799999999999999999999999999999998887774 556532   12221   222347888888876533444


Q ss_pred             HH-------HhhccCCEEEEEcC
Q 021300          264 LI-------GLLKSQGKLVLVGA  279 (314)
Q Consensus       264 ~~-------~~l~~~G~~v~~G~  279 (314)
                      .+       ..++++..++.++.
T Consensus        94 v~~~~~~l~~~l~~g~~vv~~st  116 (310)
T 3doj_A           94 VVFDKGGVLEQICEGKGYIDMST  116 (310)
T ss_dssp             HHHSTTCGGGGCCTTCEEEECSC
T ss_pred             HHhCchhhhhccCCCCEEEECCC
Confidence            44       33455556666553

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.08  E-value=0.011  Score=51.60  Aligned_cols=95  Identities=8%  Similarity=0.021  Sum_probs=64.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc---E---EecCCCHHHHHHHcCCccEEEEcc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD---S---FLVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~---~---~v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      -.+.+++|+|+|++|.+++..+...| +|+++.++.++.+++.++++..   .   .++..+   +.+..+.+|++++++
T Consensus       126 l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~---~~~~~~~~DilVn~a  201 (287)
T 1nvt_A          126 VKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG---LDVDLDGVDIIINAT  201 (287)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC---TTCCCTTCCEEEECS
T ss_pred             cCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee---HHHhhCCCCEEEECC
Confidence            35789999999999999999999899 9999999988777776665321   0   001111   122335799999999


Q ss_pred             CCcccH-----HH-HHHhhccCCEEEEEcCC
Q 021300          256 SAVHPL-----MP-LIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       256 g~~~~~-----~~-~~~~l~~~G~~v~~G~~  280 (314)
                      |.....     .. ....++++..++.+...
T Consensus       202 g~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y~  232 (287)
T 1nvt_A          202 PIGMYPNIDVEPIVKAEKLREDMVVMDLIYN  232 (287)
T ss_dssp             CTTCTTCCSSCCSSCSTTCCSSSEEEECCCS
T ss_pred             CCCCCCCCCCCCCCCHHHcCCCCEEEEeeeC
Confidence            854310     01 23456777788888753

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=96.07  E-value=0.061  Score=50.05  Aligned_cols=75  Identities=17%  Similarity=0.301  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh--hhHHHHHHHcCCcEE-ecCCCHHHHH-------HHcCC-ccE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP--SKKSEAIERLGADSF-LVSRDQDEMQ-------AAMGT-MDG  250 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~--~~~~~~~~~~ga~~~-v~~~~~~~~~-------~~~~~-~d~  250 (314)
                      +|.++||.|+ |++|...++.+...|++++++.++.  +...++.++.+...+ .|-.+.+.+.       +..++ +|+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~  291 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI  291 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence            5788999887 9999999999888999999888753  334455556665432 2333433222       22234 999


Q ss_pred             EEEccCC
Q 021300          251 IIDTVSA  257 (314)
Q Consensus       251 v~d~~g~  257 (314)
                      +|++.|.
T Consensus       292 lV~nAGv  298 (454)
T 3u0b_A          292 LVNNAGI  298 (454)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999984

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=96.06  E-value=0.018  Score=49.73  Aligned_cols=62  Identities=18%  Similarity=0.180  Sum_probs=46.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcC--CccEEEEccCCc
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG--TMDGIIDTVSAV  258 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~--~~d~v~d~~g~~  258 (314)
                      .+..+|||.|+ |.+|...++.+...|.+|+++++..               .|-.+++.+.++..  ++|+||.+++..
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~Dl~d~~~~~~~~~~~~~d~vih~A~~~   74 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEKKPNVVINCAAHT   74 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc---------------CCCCCHHHHHHHHHhcCCCEEEECCccC
Confidence            56788999998 9999999999988899999888752               23445555555444  789999988743

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=96.06  E-value=0.02  Score=48.89  Aligned_cols=74  Identities=20%  Similarity=0.182  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHH-HHHHc---CCcE---EecCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSE-AIERL---GADS---FLVSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~-~~~~~---ga~~---~v~~~~~~~~~~~-------~~~  247 (314)
                      .+.++||.|+ |++|...++.+...|++|+++.+.+++..+ +.+.+   +...   ..|-.+++.+.++       .++
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4578999987 999999999999999999998776544333 32222   2222   1244555433332       247


Q ss_pred             ccEEEEccC
Q 021300          248 MDGIIDTVS  256 (314)
Q Consensus       248 ~d~v~d~~g  256 (314)
                      +|++|.++|
T Consensus        86 id~lv~~Ag   94 (264)
T 3i4f_A           86 IDFLINNAG   94 (264)
T ss_dssp             CCEEECCCC
T ss_pred             CCEEEECCc
Confidence            999999998

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.05  E-value=0.043  Score=48.90  Aligned_cols=90  Identities=18%  Similarity=0.257  Sum_probs=62.9

Q ss_pred             CEEEEEcCChHHHHHHHHHH-HC-CCeEE-EEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHc-CCccEEEEccCCccc
Q 021300          185 MHVGVVGLGGLGHVAVKFAK-AM-GVKVT-VISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM-GTMDGIIDTVSAVHP  260 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~-~~-g~~vi-~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~-~~~d~v~d~~g~~~~  260 (314)
                      -+|.|+|+|.+|...++.++ .. +++++ +.++++++.+++.+++|...++.  +.+.  .+. ..+|+|+.++.....
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~--~~~~--~l~~~~~D~V~i~tp~~~h   84 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT--NYKD--MIDTENIDAIFIVAPTPFH   84 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES--CHHH--HHTTSCCSEEEECSCGGGH
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC--CHHH--HhcCCCCCEEEEeCChHhH
Confidence            46889999999998888877 44 66765 45667777777778888754432  2222  122 379999999988766


Q ss_pred             HHHHHHhhccCCEEEEEcC
Q 021300          261 LMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       261 ~~~~~~~l~~~G~~v~~G~  279 (314)
                      ...+..+++. |+-+++..
T Consensus        85 ~~~~~~al~~-G~~v~~eK  102 (346)
T 3cea_A           85 PEMTIYAMNA-GLNVFCEK  102 (346)
T ss_dssp             HHHHHHHHHT-TCEEEECS
T ss_pred             HHHHHHHHHC-CCEEEEcC
Confidence            7777788776 46556643

>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}

Probab=96.03  E-value=0.046  Score=48.21  Aligned_cols=94  Identities=16%  Similarity=0.184  Sum_probs=64.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHC-CC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAM-GV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~-g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~  259 (314)
                      ....++.|+|+|.+|...++.+... |. ++.++.+++++.+++.++++.+. ....+   ..+.....|+|+.++....
T Consensus       133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~-~~~~~---~~e~v~~aDiVi~atp~~~  208 (312)
T 2i99_A          133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEV-RVCSS---VQEAVAGADVIITVTLATE  208 (312)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCC-EECSS---HHHHHTTCSEEEECCCCSS
T ss_pred             CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCe-EEeCC---HHHHHhcCCEEEEEeCCCC
Confidence            5677899999999998888776554 76 88899999998888888877311 11222   2234456899999987432


Q ss_pred             -cHHHHHHhhccCCEEEEEcCCC
Q 021300          260 -PLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       260 -~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                       .+..  ..++++-.++.+|...
T Consensus       209 ~v~~~--~~l~~g~~vi~~g~~~  229 (312)
T 2i99_A          209 PILFG--EWVKPGAHINAVGASR  229 (312)
T ss_dssp             CCBCG--GGSCTTCEEEECCCCS
T ss_pred             cccCH--HHcCCCcEEEeCCCCC
Confidence             1111  5677777777776543

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=96.03  E-value=0.028  Score=50.29  Aligned_cols=87  Identities=23%  Similarity=0.264  Sum_probs=61.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc--
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--  259 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~--  259 (314)
                      -.|.++.|+|.|.+|...++.++.+|.+|+++.+.+.+      ..+...   ..   .+.++....|+|+-++....  
T Consensus       169 l~gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~------~~~~~~---~~---sl~ell~~aDvVil~vP~t~~t  236 (340)
T 4dgs_A          169 PKGKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLS------GVDWIA---HQ---SPVDLARDSDVLAVCVAASAAT  236 (340)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCT------TSCCEE---CS---SHHHHHHTCSEEEECC------
T ss_pred             ccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCccc------ccCcee---cC---CHHHHHhcCCEEEEeCCCCHHH
Confidence            35789999999999999999999999999998887653      123221   11   23344556899998876221  


Q ss_pred             --cH-HHHHHhhccCCEEEEEcCC
Q 021300          260 --PL-MPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       260 --~~-~~~~~~l~~~G~~v~~G~~  280 (314)
                        .+ ...+..|+++..++.++..
T Consensus       237 ~~li~~~~l~~mk~gailIN~aRG  260 (340)
T 4dgs_A          237 QNIVDASLLQALGPEGIVVNVARG  260 (340)
T ss_dssp             ----CHHHHHHTTTTCEEEECSCC
T ss_pred             HHHhhHHHHhcCCCCCEEEECCCC
Confidence              11 4567788999999988764

>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6

Probab=96.03  E-value=0.028  Score=50.24  Aligned_cols=87  Identities=26%  Similarity=0.250  Sum_probs=61.0

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHH
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP  263 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~  263 (314)
                      +.+|.|+|.|.+|.+.++.++..|.+|++..+++++..+..++.|.+..    +.+   +.....|+|+-++.... ...
T Consensus        16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~----~~~---e~~~~aDvVilavp~~~-~~~   87 (338)
T 1np3_A           16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA----DVK---TAVAAADVVMILTPDEF-QGR   87 (338)
T ss_dssp             TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE----CHH---HHHHTCSEEEECSCHHH-HHH
T ss_pred             CCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc----cHH---HHHhcCCEEEEeCCcHH-HHH
Confidence            3569999999999999999999999999888887665566677787432    221   23346899999998664 344


Q ss_pred             HHH-----hhccCCEEEEEc
Q 021300          264 LIG-----LLKSQGKLVLVG  278 (314)
Q Consensus       264 ~~~-----~l~~~G~~v~~G  278 (314)
                      .++     .++++..++.++
T Consensus        88 v~~~~i~~~l~~~~ivi~~~  107 (338)
T 1np3_A           88 LYKEEIEPNLKKGATLAFAH  107 (338)
T ss_dssp             HHHHHTGGGCCTTCEEEESC
T ss_pred             HHHHHHHhhCCCCCEEEEcC
Confidence            443     345555566543

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.01  E-value=0.018  Score=49.21  Aligned_cols=77  Identities=22%  Similarity=0.375  Sum_probs=48.2

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------hhHHHHHHHc---C-CcEE--ec-CC
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP-------------------SKKSEAIERL---G-ADSF--LV-SR  236 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~-------------------~~~~~~~~~~---g-a~~~--v~-~~  236 (314)
                      +.+|+|+|+|++|..++..+...|. ++.+++.+.                   .+.+.+.+.+   . ...+  +. .-
T Consensus        28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  107 (251)
T 1zud_1           28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRL  107 (251)
T ss_dssp             TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccC
Confidence            4789999999999999999999998 555654431                   2222332222   2 2121  11 11


Q ss_pred             CHHHHHHHcCCccEEEEccCCccc
Q 021300          237 DQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       237 ~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      +.+.+.++..++|+|++++.+..+
T Consensus       108 ~~~~~~~~~~~~DvVi~~~d~~~~  131 (251)
T 1zud_1          108 TGEALKDAVARADVVLDCTDNMAT  131 (251)
T ss_dssp             CHHHHHHHHHHCSEEEECCSSHHH
T ss_pred             CHHHHHHHHhcCCEEEECCCCHHH
Confidence            234444555679999999987653

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=96.00  E-value=0.012  Score=50.75  Aligned_cols=91  Identities=18%  Similarity=0.200  Sum_probs=62.5

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHHcCC-ccEEEEccCCc---
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGT-MDGIIDTVSAV---  258 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~~~~-~d~v~d~~g~~---  258 (314)
                      +.+|||.|+|.+|...++.+...|.+|+++++++++.     .-+...+ .|-.+++.+.++..+ +|+||.+++..   
T Consensus         3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~~~   77 (286)
T 3gpi_A            3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPM-----PAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASEYS   77 (286)
T ss_dssp             CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCC-----CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHHHC
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcccc-----ccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCCCC
Confidence            3579999999999999999999999999999987642     1234332 244555554444444 99999988631   


Q ss_pred             ---------ccHHHHHHhhccC--CEEEEEcC
Q 021300          259 ---------HPLMPLIGLLKSQ--GKLVLVGA  279 (314)
Q Consensus       259 ---------~~~~~~~~~l~~~--G~~v~~G~  279 (314)
                               .....+++.++..  ++++.++.
T Consensus        78 ~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS  109 (286)
T 3gpi_A           78 DEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS  109 (286)
T ss_dssp             -----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence                     1244556666543  47888765

>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*

Probab=95.99  E-value=0.046  Score=46.62  Aligned_cols=84  Identities=13%  Similarity=0.144  Sum_probs=57.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHHH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  264 (314)
                      +|.|+|+|.+|...+..+...| .+|+++++++++.+++.+++|....-+..      +.. .+|+||.++... .....
T Consensus         2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~------~~~-~~D~vi~~v~~~-~~~~v   73 (263)
T 1yqg_A            2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLP------ELH-SDDVLILAVKPQ-DMEAA   73 (263)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCC------CCC-TTSEEEECSCHH-HHHHH
T ss_pred             EEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHH------HHh-cCCEEEEEeCch-hHHHH
Confidence            5889999999999888887778 89999999998888887777764321111      123 578888887733 35555


Q ss_pred             HHhhcc-CCEEEEE
Q 021300          265 IGLLKS-QGKLVLV  277 (314)
Q Consensus       265 ~~~l~~-~G~~v~~  277 (314)
                      +..+.+ +..++.+
T Consensus        74 ~~~l~~~~~ivv~~   87 (263)
T 1yqg_A           74 CKNIRTNGALVLSV   87 (263)
T ss_dssp             HTTCCCTTCEEEEC
T ss_pred             HHHhccCCCEEEEe
Confidence            555542 3334444

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.99  E-value=0.033  Score=47.89  Aligned_cols=89  Identities=12%  Similarity=0.118  Sum_probs=62.9

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHHcCCccEEEEccCCcc----
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAAMGTMDGIIDTVSAVH----  259 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v-~~~~~~~~~~~~~~~d~v~d~~g~~~----  259 (314)
                      .+|||.|+|.+|...+..+...|.+|+++++++.+...+. ..+.+.+. |-.+.+     ..++|+||.+++...    
T Consensus         6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~~~~   79 (286)
T 3ius_A            6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIR-ASGAEPLLWPGEEPS-----LDGVTHLLISTAPDSGGDP   79 (286)
T ss_dssp             CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH-HTTEEEEESSSSCCC-----CTTCCEEEECCCCBTTBCH
T ss_pred             CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh-hCCCeEEEecccccc-----cCCCCEEEECCCccccccH
Confidence            5799999999999999999888999999999988775553 44544332 223322     568999999987432    


Q ss_pred             cHHHHHHhhcc----CCEEEEEcC
Q 021300          260 PLMPLIGLLKS----QGKLVLVGA  279 (314)
Q Consensus       260 ~~~~~~~~l~~----~G~~v~~G~  279 (314)
                      ....+++.++.    -.+++.++.
T Consensus        80 ~~~~l~~a~~~~~~~~~~~v~~Ss  103 (286)
T 3ius_A           80 VLAALGDQIAARAAQFRWVGYLST  103 (286)
T ss_dssp             HHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred             HHHHHHHHHHhhcCCceEEEEeec
Confidence            23445555544    268888765

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=95.98  E-value=0.025  Score=47.46  Aligned_cols=98  Identities=15%  Similarity=0.091  Sum_probs=65.3

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCChhhHHHHHHH---cCCc--EEecCCC-HHHHHHHc-----CC
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIER---LGAD--SFLVSRD-QDEMQAAM-----GT  247 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~--g~~vi~v~~~~~~~~~~~~~---~ga~--~~v~~~~-~~~~~~~~-----~~  247 (314)
                      ..++.+||-+|+| .|..++.+++..  +.+++.++.+++..+.+.+.   .|..  .-+...+ .+.+..+.     +.
T Consensus        70 ~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~  148 (232)
T 3cbg_A           70 LTGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPE  148 (232)
T ss_dssp             HHTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred             hcCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCC
Confidence            3567899999987 688889999876  46999999998766555433   2431  2222233 23344442     57


Q ss_pred             ccEEEEccCCc---ccHHHHHHhhccCCEEEEEcC
Q 021300          248 MDGIIDTVSAV---HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       248 ~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      ||+||-.....   ..+..+.+.|+++|.++.--.
T Consensus       149 fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~  183 (232)
T 3cbg_A          149 FDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDNV  183 (232)
T ss_dssp             EEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred             cCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            99998543321   237778899999999988543

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=95.95  E-value=0.021  Score=50.46  Aligned_cols=72  Identities=11%  Similarity=0.021  Sum_probs=49.5

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCCcEE-ecCCC-HHHHHHHcCCccEEEEccCC
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSF-LVSRD-QDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~-~~~~~~~~~~~d~v~d~~g~  257 (314)
                      +|||.|+ |.+|...++.+... |.+|+++++++.+...+.+..+...+ .|-.+ .+.+.++..++|+||.+++.
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~   77 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI   77 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCC
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccc
Confidence            6899998 99999999988887 89999999987654333211122222 13333 34455555689999999874

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=95.95  E-value=0.045  Score=45.91  Aligned_cols=95  Identities=11%  Similarity=0.087  Sum_probs=62.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHH-cCCccEEEEccCCcc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVH  259 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v-~~~~~~~~~~~-~~~~d~v~d~~g~~~  259 (314)
                      ...++++|+|+|.+|...++.+...|. ++++++++++.+++.  .+...+. |..+++.+.+. ..++|.++-++++..
T Consensus         7 ~~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~   83 (234)
T 2aef_A            7 AKSRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR--SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDS   83 (234)
T ss_dssp             ---CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHH
T ss_pred             CCCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcH
Confidence            455789999999999999998888888 888888877765553  5654433 44555665554 568999999998753


Q ss_pred             cH---HHHHHhhccCCEEEEEcC
Q 021300          260 PL---MPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       260 ~~---~~~~~~l~~~G~~v~~G~  279 (314)
                      .-   ....+.+.+..+++.-..
T Consensus        84 ~n~~~~~~a~~~~~~~~iia~~~  106 (234)
T 2aef_A           84 ETIHCILGIRKIDESVRIIAEAE  106 (234)
T ss_dssp             HHHHHHHHHHHHCSSSEEEEECS
T ss_pred             HHHHHHHHHHHHCCCCeEEEEEC
Confidence            22   223334445546655543

>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1

Probab=95.94  E-value=0.0096  Score=53.20  Aligned_cols=106  Identities=22%  Similarity=0.260  Sum_probs=70.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc--
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--  259 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~--  259 (314)
                      -.|.+|.|+|.|.+|...++.++.+|++|+++++...+.  + ++ .++    ..+.   .++....|+|+.++....  
T Consensus       143 l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~-~~~----~~~l---~ell~~aDvV~~~~P~~~~t  211 (333)
T 1dxy_A          143 LGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D-HP-DFD----YVSL---EDLFKQSDVIDLHVPGIEQN  211 (333)
T ss_dssp             GGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C-CT-TCE----ECCH---HHHHHHCSEEEECCCCCGGG
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h-Hh-ccc----cCCH---HHHHhcCCEEEEcCCCchhH
Confidence            467899999999999999999999999999998876432  1 11 121    1122   233446899999886432  


Q ss_pred             --cH-HHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300          260 --PL-MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       260 --~~-~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~  299 (314)
                        .+ ...+..|++++.++.++.. +...-....-.+++.++.
T Consensus       212 ~~li~~~~l~~mk~ga~lIn~srg-~~vd~~aL~~aL~~g~i~  253 (333)
T 1dxy_A          212 THIINEAAFNLMKPGAIVINTARP-NLIDTQAMLSNLKSGKLA  253 (333)
T ss_dssp             TTSBCHHHHHHSCTTEEEEECSCT-TSBCHHHHHHHHHTTSEE
T ss_pred             HHHhCHHHHhhCCCCcEEEECCCC-cccCHHHHHHHHHhCCcc
Confidence              12 5678899999999999873 333333333333444444

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=95.94  E-value=0.0076  Score=50.94  Aligned_cols=97  Identities=21%  Similarity=0.129  Sum_probs=63.6

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEEecCCCHHH-HHHHc-CCccEE-EEc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSFLVSRDQDE-MQAAM-GTMDGI-IDT  254 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~v~~~~~~~-~~~~~-~~~d~v-~d~  254 (314)
                      ..+|.+||-+|+|. |..+..+++..+.++++++.+++..+.+.+..   +....+...+.+. ..... +.||.| +|+
T Consensus        58 ~~~G~rVLdiG~G~-G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~  136 (236)
T 3orh_A           58 SSKGGRVLEVGFGM-AIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDT  136 (236)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECC
T ss_pred             ccCCCeEEEECCCc-cHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEee
Confidence            37899999999874 77888888877789999999987776554433   2222222333222 22222 368887 454


Q ss_pred             cCCc----------ccHHHHHHhhccCCEEEEEc
Q 021300          255 VSAV----------HPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       255 ~g~~----------~~~~~~~~~l~~~G~~v~~G  278 (314)
                      ....          ..+..+.++|+|||+++.+.
T Consensus       137 ~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          137 YPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             CCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             eecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            4321          13566888999999999874

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=95.93  E-value=0.02  Score=52.64  Aligned_cols=76  Identities=16%  Similarity=0.134  Sum_probs=52.0

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHH-CCCeEEEEeCChhh---------------HHHHHHHcCCcEEe---cCCCHH--
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKA-MGVKVTVISTSPSK---------------KSEAIERLGADSFL---VSRDQD--  239 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~-~g~~vi~v~~~~~~---------------~~~~~~~~ga~~~v---~~~~~~--  239 (314)
                      +.|.++||.|+ +++|++++..+.. .|++|+++.++.+.               ..+.+++.|.....   |-.+++  
T Consensus        59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v  138 (422)
T 3s8m_A           59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAR  138 (422)
T ss_dssp             SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence            45788899987 9999998888888 89999998876432               12344566754332   334443  


Q ss_pred             -----HHHHHc-CCccEEEEccCC
Q 021300          240 -----EMQAAM-GTMDGIIDTVSA  257 (314)
Q Consensus       240 -----~~~~~~-~~~d~v~d~~g~  257 (314)
                           .+.+.. +.+|++++++|.
T Consensus       139 ~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          139 AQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             HHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCCEEEEcCcc
Confidence                 233334 679999999875

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=95.93  E-value=0.022  Score=46.48  Aligned_cols=69  Identities=23%  Similarity=0.316  Sum_probs=50.5

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE--ecCCCHHHHHHHc---CCccEEEEccCC
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF--LVSRDQDEMQAAM---GTMDGIIDTVSA  257 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~--v~~~~~~~~~~~~---~~~d~v~d~~g~  257 (314)
                      ++||.|+ |.+|...++.+...  +|+++++++++.+++.++++. .+  .|-.+++.+.+..   +++|++|.++|.
T Consensus         2 ~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~   76 (207)
T 2yut_A            2 RVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHAVGK   76 (207)
T ss_dssp             EEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCC
T ss_pred             EEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence            6899997 99999888877666  999999998877777666554 22  2444555555443   389999999874

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=95.92  E-value=0.072  Score=45.94  Aligned_cols=89  Identities=19%  Similarity=0.134  Sum_probs=62.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHcCCc-EEecCCCHHHHHHHcC-CccEEEEccCCccc-
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAAMG-TMDGIIDTVSAVHP-  260 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~ga~-~~v~~~~~~~~~~~~~-~~d~v~d~~g~~~~-  260 (314)
                      +|.|+|+|.+|.+.++.++..|.  +|+++++++++.+.+ +++|.. ...  .+.   .+... .+|+|+.++..... 
T Consensus         3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~-~~~g~~~~~~--~~~---~~~~~~~aDvVilavp~~~~~   76 (281)
T 2g5c_A            3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA-VDLGIIDEGT--TSI---AKVEDFSPDFVMLSSPVRTFR   76 (281)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH-HHTTSCSEEE--SCG---GGGGGTCCSEEEECSCHHHHH
T ss_pred             EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHH-HHCCCccccc--CCH---HHHhcCCCCEEEEcCCHHHHH
Confidence            68899999999999999998887  899999988777554 567763 222  111   12345 79999999986542 


Q ss_pred             --HHHHHHhhccCCEEEEEcCC
Q 021300          261 --LMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       261 --~~~~~~~l~~~G~~v~~G~~  280 (314)
                        +......++++..++.++..
T Consensus        77 ~v~~~l~~~l~~~~iv~~~~~~   98 (281)
T 2g5c_A           77 EIAKKLSYILSEDATVTDQGSV   98 (281)
T ss_dssp             HHHHHHHHHSCTTCEEEECCSC
T ss_pred             HHHHHHHhhCCCCcEEEECCCC
Confidence              22333456677777776654

>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*

Probab=95.88  E-value=0.072  Score=49.88  Aligned_cols=95  Identities=20%  Similarity=0.253  Sum_probs=62.9

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHHH
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  264 (314)
                      .+|.|+|+|.+|...+..+...|.+|+++.+++++.+++.++.+...+....+.+...+..+..|+|+-++.....+...
T Consensus         6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v   85 (474)
T 2iz1_A            6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT   85 (474)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred             CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence            35889999999999888888889999999999988888876653111223344333222223589999999874324444


Q ss_pred             HH----hhccCCEEEEEcC
Q 021300          265 IG----LLKSQGKLVLVGA  279 (314)
Q Consensus       265 ~~----~l~~~G~~v~~G~  279 (314)
                      ++    .++++-.++.++.
T Consensus        86 l~~l~~~l~~g~iiId~s~  104 (474)
T 2iz1_A           86 IKSLLPLLDIGDILIDGGN  104 (474)
T ss_dssp             HHHHGGGCCTTCEEEECSC
T ss_pred             HHHHHhhCCCCCEEEECCC
Confidence            43    4455555555543

>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6

Probab=95.88  E-value=0.058  Score=50.58  Aligned_cols=93  Identities=24%  Similarity=0.241  Sum_probs=62.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC----cEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA----DSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga----~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~  261 (314)
                      +|.|+|+|.+|...+..+...|.+|+++.+++++.+++.++.|.    +.+....+.+.+.+..+..|+||-++.....+
T Consensus         3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~v   82 (478)
T 1pgj_A            3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT   82 (478)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred             EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHHH
Confidence            58899999999999888888899999999999888888776561    11223344433222224689999999874223


Q ss_pred             HHHH----HhhccCCEEEEEc
Q 021300          262 MPLI----GLLKSQGKLVLVG  278 (314)
Q Consensus       262 ~~~~----~~l~~~G~~v~~G  278 (314)
                      ...+    ..++++-.++.++
T Consensus        83 ~~vl~~l~~~l~~g~iIId~s  103 (478)
T 1pgj_A           83 DSTIEQLKKVFEKGDILVDTG  103 (478)
T ss_dssp             HHHHHHHHHHCCTTCEEEECC
T ss_pred             HHHHHHHHhhCCCCCEEEECC
Confidence            4333    4455555555554

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.88  E-value=0.033  Score=48.37  Aligned_cols=77  Identities=18%  Similarity=0.168  Sum_probs=57.0

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCC---eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGV---KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~---~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~  261 (314)
                      .+|.|+|+|.+|.+.++.+...|.   +|+++++++++.+++.+++|....   .+.   .+.....|+||.++-... +
T Consensus         4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~---~~~---~~~~~~aDvVilav~p~~-~   76 (280)
T 3tri_A            4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTT---QDN---RQGALNADVVVLAVKPHQ-I   76 (280)
T ss_dssp             SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEE---SCH---HHHHSSCSEEEECSCGGG-H
T ss_pred             CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEe---CCh---HHHHhcCCeEEEEeCHHH-H
Confidence            468899999999999998888887   899999999988888777786432   121   233457899999996543 5


Q ss_pred             HHHHHhh
Q 021300          262 MPLIGLL  268 (314)
Q Consensus       262 ~~~~~~l  268 (314)
                      ...++.+
T Consensus        77 ~~vl~~l   83 (280)
T 3tri_A           77 KMVCEEL   83 (280)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            5554444

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=95.87  E-value=0.007  Score=51.25  Aligned_cols=96  Identities=20%  Similarity=0.160  Sum_probs=58.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHH-CCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHc-----CCccEEEEcc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTV  255 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~-~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~-----~~~d~v~d~~  255 (314)
                      .+.++||.|+ +++|.+.++.+.. .|++|++..+.++...+   +. .-...|-.+++.+.++.     +.+|++++++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~---~~-~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nA   78 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAE---NL-KFIKADLTKQQDITNVLDIIKNVSFDGIFLNA   78 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCT---TE-EEEECCTTCHHHHHHHHHHTTTCCEEEEEECC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccc---cc-eEEecCcCCHHHHHHHHHHHHhCCCCEEEECC
Confidence            4678999997 9999998877766 67888888776541100   00 01112445554433332     2689999999


Q ss_pred             CCcc-------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300          256 SAVH-------------------------PLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       256 g~~~-------------------------~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      |...                         .++.+++.++++|+++.+++...
T Consensus        79 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~  130 (244)
T 4e4y_A           79 GILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQC  130 (244)
T ss_dssp             CCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGG
T ss_pred             ccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHH
Confidence            8420                         12223344556789999987543

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=95.87  E-value=0.026  Score=49.44  Aligned_cols=71  Identities=15%  Similarity=0.157  Sum_probs=50.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHHcC--CccEEEEccCC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMG--TMDGIIDTVSA  257 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~~~--~~d~v~d~~g~  257 (314)
                      ++-.+|||.|+ |.+|...++.+...|.+|+++++.+.. ..    ++...+ .|-.+++.+.++..  .+|+||.+++.
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~   84 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----PNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAK   84 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSC
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcc
Confidence            56688999998 999999999999899999999988654 21    233222 24455666555543  49999999885

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=95.84  E-value=0.0074  Score=52.79  Aligned_cols=86  Identities=20%  Similarity=0.283  Sum_probs=60.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc-c-
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV-H-  259 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~-~-  259 (314)
                      -.|.++.|+|.|.+|...++.++.+|.+|+++.+++++...      .+ .  ..+   +.++....|+|+-++... . 
T Consensus       120 l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------~~-~--~~~---l~ell~~aDiV~l~~P~t~~t  187 (290)
T 3gvx_A          120 LYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV------DV-I--SES---PADLFRQSDFVLIAIPLTDKT  187 (290)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC------SE-E--CSS---HHHHHHHCSEEEECCCCCTTT
T ss_pred             eecchheeeccCchhHHHHHHHHhhCcEEEEEecccccccc------cc-c--cCC---hHHHhhccCeEEEEeeccccc
Confidence            35789999999999999999999999999999887653311      11 1  111   223334578888877631 1 


Q ss_pred             ---cHHHHHHhhccCCEEEEEcC
Q 021300          260 ---PLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       260 ---~~~~~~~~l~~~G~~v~~G~  279 (314)
                         .-...++.|+++..++.++.
T Consensus       188 ~~li~~~~l~~mk~gailIN~aR  210 (290)
T 3gvx_A          188 RGMVNSRLLANARKNLTIVNVAR  210 (290)
T ss_dssp             TTCBSHHHHTTCCTTCEEEECSC
T ss_pred             hhhhhHHHHhhhhcCceEEEeeh
Confidence               12556778888888888875

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=95.84  E-value=0.032  Score=49.31  Aligned_cols=96  Identities=23%  Similarity=0.130  Sum_probs=62.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCC--------cEEecCCC-HHHHHHHcCCccEE
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGA--------DSFLVSRD-QDEMQAAMGTMDGI  251 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga--------~~~v~~~~-~~~~~~~~~~~d~v  251 (314)
                      ..+.+||++|+|. |..+..+++.. ..+++.++.+++..+.+.+.+..        ..-+...+ .+.+....+.||+|
T Consensus       107 ~~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I  185 (314)
T 2b2c_A          107 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVI  185 (314)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEE
Confidence            3557999998764 66677777765 46899999888777666555531        11122233 23343434579998


Q ss_pred             EEccCC----------cccHHHHHHhhccCCEEEEEc
Q 021300          252 IDTVSA----------VHPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       252 ~d~~g~----------~~~~~~~~~~l~~~G~~v~~G  278 (314)
                      +-....          ...+..+.+.|+++|.++.-.
T Consensus       186 i~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~  222 (314)
T 2b2c_A          186 ITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  222 (314)
T ss_dssp             EECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             EEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence            854421          234778889999999998864

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=95.83  E-value=0.056  Score=47.74  Aligned_cols=94  Identities=19%  Similarity=0.108  Sum_probs=62.5

Q ss_pred             CEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCC----c-EEecCCCHHHHHHH-cCCccEEEEccCC
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGA----D-SFLVSRDQDEMQAA-MGTMDGIIDTVSA  257 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga----~-~~v~~~~~~~~~~~-~~~~d~v~d~~g~  257 (314)
                      .+||++|+|. |..+..+++.+ +.++++++.+++-.+.+.+.++.    . .++..+..+++... .+.||+||-....
T Consensus        91 ~rVLdIG~G~-G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~  169 (317)
T 3gjy_A           91 LRITHLGGGA-CTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA  169 (317)
T ss_dssp             CEEEEESCGG-GHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred             CEEEEEECCc-CHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence            3899998864 66777888855 67999999998877666666653    1 22222223444443 2479998864321


Q ss_pred             ----------cccHHHHHHhhccCCEEEEEcC
Q 021300          258 ----------VHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       258 ----------~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                                ...+..+.+.|+++|.++.--.
T Consensus       170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~  201 (317)
T 3gjy_A          170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCG  201 (317)
T ss_dssp             TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence                      1236788899999999887643

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=95.83  E-value=0.049  Score=48.70  Aligned_cols=93  Identities=19%  Similarity=0.112  Sum_probs=64.7

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHHH
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  264 (314)
                      .+|.|+|.|.+|...+..++..|.+|+++++++++.+.+ +++|+...  .+..+.+.......|+||-++.... +...
T Consensus         9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a-~~~G~~~~--~~~~e~~~~a~~~aDlVilavP~~~-~~~v   84 (341)
T 3ktd_A            9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSA-VDEGFDVS--ADLEATLQRAAAEDALIVLAVPMTA-IDSL   84 (341)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHH-HHTTCCEE--SCHHHHHHHHHHTTCEEEECSCHHH-HHHH
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeee--CCHHHHHHhcccCCCEEEEeCCHHH-HHHH
Confidence            568999999999999999999999999999998877655 57787532  1112333333346899999998543 3333


Q ss_pred             HHh---hccCCEEEEEcCCC
Q 021300          265 IGL---LKSQGKLVLVGAPE  281 (314)
Q Consensus       265 ~~~---l~~~G~~v~~G~~~  281 (314)
                      ++.   ++++..++.+++..
T Consensus        85 l~~l~~~~~~~iv~Dv~Svk  104 (341)
T 3ktd_A           85 LDAVHTHAPNNGFTDVVSVK  104 (341)
T ss_dssp             HHHHHHHCTTCCEEECCSCS
T ss_pred             HHHHHccCCCCEEEEcCCCC
Confidence            332   35566677777653

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=95.81  E-value=0.059  Score=47.80  Aligned_cols=89  Identities=19%  Similarity=0.225  Sum_probs=61.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc-c-
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV-H-  259 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~-~-  259 (314)
                      -.|.++.|+|.|.+|...++.++.+|.+|+++.++++...      .++..+...   .+.++....|+|+-++... . 
T Consensus       135 l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~------~~~~~~~~~---~l~ell~~aDvV~l~lPlt~~t  205 (324)
T 3evt_A          135 LTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPAD------HFHETVAFT---ATADALATANFIVNALPLTPTT  205 (324)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCT------TCSEEEEGG---GCHHHHHHCSEEEECCCCCGGG
T ss_pred             ccCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhH------hHhhccccC---CHHHHHhhCCEEEEcCCCchHH
Confidence            3588999999999999999999999999999988764321      122222111   1223334578888876521 1 


Q ss_pred             ---cHHHHHHhhccCCEEEEEcC
Q 021300          260 ---PLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       260 ---~~~~~~~~l~~~G~~v~~G~  279 (314)
                         .-...+..|+++..++.+|.
T Consensus       206 ~~li~~~~l~~mk~gailIN~aR  228 (324)
T 3evt_A          206 HHLFSTELFQQTKQQPMLINIGR  228 (324)
T ss_dssp             TTCBSHHHHHTCCSCCEEEECSC
T ss_pred             HHhcCHHHHhcCCCCCEEEEcCC
Confidence               12556778888888888875

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=95.81  E-value=0.033  Score=47.58  Aligned_cols=98  Identities=26%  Similarity=0.267  Sum_probs=63.8

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCC--cEEecCCCHHHHHHHcCCccEEEEc
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGA--DSFLVSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga--~~~v~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      .++++.+||-+|+|. |..+..+++..+.+++.++.++...+.+.+.   .|.  ..-+...+........+.||+|+-.
T Consensus        58 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~  136 (273)
T 3bus_A           58 DVRSGDRVLDVGCGI-GKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWAL  136 (273)
T ss_dssp             CCCTTCEEEEESCTT-SHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEe
Confidence            368999999999875 7788888888899999999998776555433   232  1111112211111112469998853


Q ss_pred             cC-----C-cccHHHHHHhhccCCEEEEEc
Q 021300          255 VS-----A-VHPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       255 ~g-----~-~~~~~~~~~~l~~~G~~v~~G  278 (314)
                      -.     + ...+..+.+.|+++|++++..
T Consensus       137 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~  166 (273)
T 3bus_A          137 ESLHHMPDRGRALREMARVLRPGGTVAIAD  166 (273)
T ss_dssp             SCTTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             chhhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            22     1 224677888999999988764

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=95.80  E-value=0.041  Score=46.66  Aligned_cols=90  Identities=17%  Similarity=0.235  Sum_probs=60.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhh--------------HHHHHHHcCCcEEecCCCHHHHHHHcCC
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK--------------KSEAIERLGADSFLVSRDQDEMQAAMGT  247 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~--------------~~~~~~~~ga~~~v~~~~~~~~~~~~~~  247 (314)
                      ..+.+|.|+|+|.+|...++.+...|.+|+++.+++++              ..++.++++....-   +   ..+....
T Consensus        17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~e~~~~   90 (245)
T 3dtt_A           17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLA---A---FADVAAG   90 (245)
T ss_dssp             --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEE---E---HHHHHHH
T ss_pred             cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceecc---C---HHHHHhc
Confidence            45688999999999999999999999999999999876              44444445543321   1   1123345


Q ss_pred             ccEEEEccCCcccHHHH----HHhhccCCEEEEEc
Q 021300          248 MDGIIDTVSAVHPLMPL----IGLLKSQGKLVLVG  278 (314)
Q Consensus       248 ~d~v~d~~g~~~~~~~~----~~~l~~~G~~v~~G  278 (314)
                      .|+||-++........+    ...+ ++-.++.++
T Consensus        91 aDvVilavp~~~~~~~~~~i~~~~l-~g~ivi~~s  124 (245)
T 3dtt_A           91 AELVVNATEGASSIAALTAAGAENL-AGKILVDIA  124 (245)
T ss_dssp             CSEEEECSCGGGHHHHHHHHCHHHH-TTSEEEECC
T ss_pred             CCEEEEccCcHHHHHHHHHhhhhhc-CCCEEEECC
Confidence            89999999876532222    2233 566777776

>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1

Probab=95.80  E-value=0.043  Score=48.96  Aligned_cols=96  Identities=17%  Similarity=0.277  Sum_probs=63.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHC-CCeEEEEeC---ChhhHHHHHH------HcCCc-------EE--------ecCCCHHH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVIST---SPSKKSEAIE------RLGAD-------SF--------LVSRDQDE  240 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~---~~~~~~~~~~------~~ga~-------~~--------v~~~~~~~  240 (314)
                      +|.|+|.|.+|...++++... +.+++.+.+   ..+....+.+      +|...       ..        +...+++.
T Consensus         5 kVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~~~   84 (335)
T 1u8f_O            5 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPSK   84 (335)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCHHH
Confidence            688999999999999887754 578887776   3444444443      22211       11        12233333


Q ss_pred             HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       241 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      +.+...++|+||+|+|.....+.+...++.|-+.|++..+.
T Consensus        85 l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~  125 (335)
T 1u8f_O           85 IKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPS  125 (335)
T ss_dssp             CCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCC
T ss_pred             CccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCC
Confidence            22222479999999998876777878888877889988764

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=95.79  E-value=0.032  Score=48.50  Aligned_cols=97  Identities=18%  Similarity=0.127  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCC--------c-EEecCCCHHHHHHHcCCccEE
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGA--------D-SFLVSRDQDEMQAAMGTMDGI  251 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga--------~-~~v~~~~~~~~~~~~~~~d~v  251 (314)
                      .++.+||++|+|. |..+..+++.. ..++++++.++...+.+.+.+..        . .++..+..+.+....+.||+|
T Consensus        77 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I  155 (283)
T 2i7c_A           77 KEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI  155 (283)
T ss_dssp             SSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred             CCCCeEEEEeCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE
Confidence            4668999998754 55666777765 45899999998877666555531        1 222222223344445679998


Q ss_pred             EEccCC----------cccHHHHHHhhccCCEEEEEcC
Q 021300          252 IDTVSA----------VHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       252 ~d~~g~----------~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      +-....          ...+..+.+.|+++|.++....
T Consensus       156 i~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~  193 (283)
T 2i7c_A          156 IVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE  193 (283)
T ss_dssp             EEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence            863321          2346778899999999998754

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=95.79  E-value=0.036  Score=45.95  Aligned_cols=98  Identities=15%  Similarity=0.049  Sum_probs=65.7

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCChhhHHHHHHH---cCCc--EEecCCCH-HHHHHHc-----CC
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIER---LGAD--SFLVSRDQ-DEMQAAM-----GT  247 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~--g~~vi~v~~~~~~~~~~~~~---~ga~--~~v~~~~~-~~~~~~~-----~~  247 (314)
                      ..++.+||=+|+|. |..+..+++.+  +.+++.++.+++..+.+.+.   .|..  .-+...+. +.+....     +.
T Consensus        62 ~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~  140 (225)
T 3tr6_A           62 LMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQ  140 (225)
T ss_dssp             HHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTC
T ss_pred             hhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCC
Confidence            35778999899865 77888888875  56999999998766555333   3432  22223333 4444444     67


Q ss_pred             ccEEEEccCCc---ccHHHHHHhhccCCEEEEEcC
Q 021300          248 MDGIIDTVSAV---HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       248 ~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      ||+|+-.....   ..+..+.+.|+++|.++.-..
T Consensus       141 fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~  175 (225)
T 3tr6_A          141 YDLIYIDADKANTDLYYEESLKLLREGGLIAVDNV  175 (225)
T ss_dssp             EEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred             ccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            99999544322   236778899999999988644

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=95.77  E-value=0.034  Score=48.28  Aligned_cols=93  Identities=15%  Similarity=0.145  Sum_probs=61.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHc----C---------C-c-EEecCCCHHHHHHHc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERL----G---------A-D-SFLVSRDQDEMQAAM  245 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~----g---------a-~-~~v~~~~~~~~~~~~  245 (314)
                      .++.+||++|+|. |..+..+++. +. ++++++.+++..+.+.+.+    +         . . .++..+..+.+.. .
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~  150 (281)
T 1mjf_A           74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-N  150 (281)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-C
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-c
Confidence            4568999998764 5666777776 54 8999999988776665555    2         1 1 2222222234444 5


Q ss_pred             CCccEEEEccCC----------cccHHHHHHhhccCCEEEEE
Q 021300          246 GTMDGIIDTVSA----------VHPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       246 ~~~d~v~d~~g~----------~~~~~~~~~~l~~~G~~v~~  277 (314)
                      +.||+|+-....          ...+..+.+.|+++|.++.-
T Consensus       151 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~  192 (281)
T 1mjf_A          151 RGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ  192 (281)
T ss_dssp             CCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence            679998865432          22467888999999999886

>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*

Probab=95.75  E-value=0.02  Score=50.16  Aligned_cols=97  Identities=15%  Similarity=0.070  Sum_probs=60.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcC--------CcEEecCCC-HHHHHHHcCCccEE
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLG--------ADSFLVSRD-QDEMQAAMGTMDGI  251 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~g--------a~~~v~~~~-~~~~~~~~~~~d~v  251 (314)
                      ..+.+||++|+|. |..+..+++..+ .++++++.++...+.+.+.+.        ...-+...| .+.+....+.||+|
T Consensus        89 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I  167 (296)
T 1inl_A           89 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVI  167 (296)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEE
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEE
Confidence            3458999998754 556677777654 589999999877655544431        111122222 22222233579998


Q ss_pred             EEccCC-----------cccHHHHHHhhccCCEEEEEcC
Q 021300          252 IDTVSA-----------VHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       252 ~d~~g~-----------~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      +-....           ...+..+.+.|+++|.++....
T Consensus       168 i~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~  206 (296)
T 1inl_A          168 IIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE  206 (296)
T ss_dssp             EEEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence            853321           2346788899999999998743

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=95.75  E-value=0.013  Score=50.19  Aligned_cols=105  Identities=16%  Similarity=0.069  Sum_probs=66.9

Q ss_pred             hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc--EEecCCCHHHHHHHcCCc
Q 021300          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD--SFLVSRDQDEMQAAMGTM  248 (314)
Q Consensus       174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~--~~v~~~~~~~~~~~~~~~  248 (314)
                      .+.....++++.+||-+|+|. |..+..+++..+++++.++.++...+.+.+.   .|..  .-+...+...+....+.|
T Consensus        37 ~l~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f  115 (267)
T 3kkz_A           37 ALSFIDNLTEKSLIADIGCGT-GGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEEL  115 (267)
T ss_dssp             HHTTCCCCCTTCEEEEETCTT-CHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCE
T ss_pred             HHHhcccCCCCCEEEEeCCCC-CHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCE
Confidence            344444568999999999875 7788888888566999999998866555433   3321  111122211111113469


Q ss_pred             cEEEEccC-----CcccHHHHHHhhccCCEEEEEcC
Q 021300          249 DGIIDTVS-----AVHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       249 d~v~d~~g-----~~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      |+|+-...     -...+..+.+.|+++|++++...
T Consensus       116 D~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  151 (267)
T 3kkz_A          116 DLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSEC  151 (267)
T ss_dssp             EEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred             EEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence            99985432     22346778889999999988753

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.75  E-value=0.073  Score=45.80  Aligned_cols=86  Identities=20%  Similarity=0.146  Sum_probs=60.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-EEecCCCHHHHHHHcCCccEEEEccCCcccHHHH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~-~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  264 (314)
                      +|.|+|+|.+|.+.+..+...|.+|+++++++++.+.+ ++.|.. ...  .+.   .+. ..+|+||.++.... ....
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~-~~~g~~~~~~--~~~---~~~-~~~D~vi~av~~~~-~~~~   73 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKA-VERQLVDEAG--QDL---SLL-QTAKIIFLCTPIQL-ILPT   73 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTSCSEEE--SCG---GGG-TTCSEEEECSCHHH-HHHH
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HhCCCCcccc--CCH---HHh-CCCCEEEEECCHHH-HHHH
Confidence            68899999999999998888899999999998877666 466753 222  121   234 67999999998653 3444


Q ss_pred             HH----hhccCCEEEEEcC
Q 021300          265 IG----LLKSQGKLVLVGA  279 (314)
Q Consensus       265 ~~----~l~~~G~~v~~G~  279 (314)
                      ++    .++++..++.++.
T Consensus        74 ~~~l~~~~~~~~~vv~~~~   92 (279)
T 2f1k_A           74 LEKLIPHLSPTAIVTDVAS   92 (279)
T ss_dssp             HHHHGGGSCTTCEEEECCS
T ss_pred             HHHHHhhCCCCCEEEECCC
Confidence            33    3455666666644

>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*

Probab=95.75  E-value=0.059  Score=50.20  Aligned_cols=101  Identities=11%  Similarity=-0.038  Sum_probs=66.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~  261 (314)
                      .|.+|||+|+|.+|...+.++...|++|++++.... ...++.++.+...+.....++    ...++|+||-++++...-
T Consensus        11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~----~l~~~~lVi~at~~~~~n   86 (457)
T 1pjq_A           11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDET----LLDSCWLAIAATDDDTVN   86 (457)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGG----GGTTCSEEEECCSCHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCcc----ccCCccEEEEcCCCHHHH
Confidence            478999999999999999999999999999887532 233333222333332222222    224799999999988544


Q ss_pred             HHHHHhhccCCEEEEEcCCCCCcccc
Q 021300          262 MPLIGLLKSQGKLVLVGAPEKPLELP  287 (314)
Q Consensus       262 ~~~~~~l~~~G~~v~~G~~~~~~~~~  287 (314)
                      .......+..|..+.+-.......+-
T Consensus        87 ~~i~~~a~~~~i~vn~~d~~e~~~~~  112 (457)
T 1pjq_A           87 QRVSDAAESRRIFCNVVDAPKAASFI  112 (457)
T ss_dssp             HHHHHHHHHTTCEEEETTCTTSSSEE
T ss_pred             HHHHHHHHHcCCEEEECCCcccCceE
Confidence            55666666778766554433333333

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=95.74  E-value=0.017  Score=48.05  Aligned_cols=96  Identities=18%  Similarity=0.176  Sum_probs=62.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc----------EEecCCCHHHHHHHcCCccE
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD----------SFLVSRDQDEMQAAMGTMDG  250 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~----------~~v~~~~~~~~~~~~~~~d~  250 (314)
                      ++++.+||-+|+|. |..+..+++. +.+++.++.++...+.+.+.....          .++. .+........+.||+
T Consensus        28 ~~~~~~vLdiG~G~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~D~  104 (235)
T 3sm3_A           28 LQEDDEILDIGCGS-GKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKV-ENASSLSFHDSSFDF  104 (235)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEE-CCTTSCCSCTTCEEE
T ss_pred             CCCCCeEEEECCCC-CHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEE-ecccccCCCCCceeE
Confidence            46889999999875 7777777776 889999999988776665544321          1111 111111111346999


Q ss_pred             EEEccC-----Cc----ccHHHHHHhhccCCEEEEEcC
Q 021300          251 IIDTVS-----AV----HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       251 v~d~~g-----~~----~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      |+-...     +.    ..+..+.+.|+++|++++...
T Consensus       105 v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  142 (235)
T 3sm3_A          105 AVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF  142 (235)
T ss_dssp             EEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence            886432     21    357778899999999988743

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=95.74  E-value=0.032  Score=51.41  Aligned_cols=86  Identities=20%  Similarity=0.308  Sum_probs=58.2

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE-EecCCCHHHHHHHcCCccEEEEccCCcc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~-~v~~~~~~~~~~~~~~~d~v~d~~g~~~  259 (314)
                      +.+|.+|+|+|+|.+|...++.++.+|.++++++..+....   .++.... +.++.+.+.+.++..++|+|+-  +...
T Consensus        32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~---~~~ad~~~~~~~~d~~~l~~~a~~~D~V~~--~~e~  106 (419)
T 4e4t_A           32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPA---GAVADRHLRAAYDDEAALAELAGLCEAVST--EFEN  106 (419)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHH---HHHSSEEECCCTTCHHHHHHHHHHCSEEEE--CCTT
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCch---hhhCCEEEECCcCCHHHHHHHHhcCCEEEE--ccCc
Confidence            57899999999999999999999999999998876544221   1222222 2345667777776677898883  3333


Q ss_pred             cHHHHHHhhccC
Q 021300          260 PLMPLIGLLKSQ  271 (314)
Q Consensus       260 ~~~~~~~~l~~~  271 (314)
                      .....+..+...
T Consensus       107 ~~~~~~~~l~~~  118 (419)
T 4e4t_A          107 VPAASLDFLART  118 (419)
T ss_dssp             CCHHHHHHHHTT
T ss_pred             CCHHHHHHHHcc
Confidence            234445555544

>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}

Probab=95.72  E-value=0.0096  Score=53.16  Aligned_cols=111  Identities=20%  Similarity=0.181  Sum_probs=72.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc---
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---  258 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---  258 (314)
                      -.|.++.|+|.|.+|...++.++.+|++|+++++...+.  + ++. +.    ..+.   .++....|+|+.++...   
T Consensus       144 l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~-~~----~~~l---~ell~~aDvV~~~~p~t~~t  212 (331)
T 1xdw_A          144 VRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--I-EDY-CT----QVSL---DEVLEKSDIITIHAPYIKEN  212 (331)
T ss_dssp             GGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--C-TTT-CE----ECCH---HHHHHHCSEEEECCCCCTTT
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--H-Hhc-cc----cCCH---HHHHhhCCEEEEecCCchHH
Confidence            357899999999999999999999999999998876532  1 111 21    1222   23334689999987642   


Q ss_pred             -ccH-HHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeeeccc
Q 021300          259 -HPL-MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWWQHD  304 (314)
Q Consensus       259 -~~~-~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~~~~  304 (314)
                       ..+ ...+..|+++..++.++. ++...-....-.+++.++.+-..+
T Consensus       213 ~~li~~~~l~~mk~ga~lin~sr-g~~vd~~aL~~aL~~g~i~gA~LD  259 (331)
T 1xdw_A          213 GAVVTRDFLKKMKDGAILVNCAR-GQLVDTEAVIEAVESGKLGGYGCD  259 (331)
T ss_dssp             CCSBCHHHHHTSCTTEEEEECSC-GGGBCHHHHHHHHHHTSEEEEEES
T ss_pred             HHHhCHHHHhhCCCCcEEEECCC-cccccHHHHHHHHHhCCceEEEEe
Confidence             112 567888999999999985 333333333333344455433333

>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A

Probab=95.71  E-value=0.0099  Score=48.48  Aligned_cols=96  Identities=20%  Similarity=0.248  Sum_probs=60.1

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEEecCCCHHHHHHHcCCccEEEEccCC
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      ++++ +||-+|+|. |..+..+++. |.+++.++.++...+.+.+.+   +...-+...+........+.||+|+.+...
T Consensus        28 ~~~~-~vLdiGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~  104 (202)
T 2kw5_A           28 IPQG-KILCLAEGE-GRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFCH  104 (202)
T ss_dssp             SCSS-EEEECCCSC-THHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECCC
T ss_pred             CCCC-CEEEECCCC-CHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhhc
Confidence            4667 899899865 7777777765 889999999987765554433   322222222211111112469999975432


Q ss_pred             c------ccHHHHHHhhccCCEEEEEcC
Q 021300          258 V------HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       258 ~------~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      .      ..+..+.+.|+++|+++....
T Consensus       105 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~  132 (202)
T 2kw5_A          105 LPSSLRQQLYPKVYQGLKPGGVFILEGF  132 (202)
T ss_dssp             CCHHHHHHHHHHHHTTCCSSEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence            1      235667788999999988754

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=95.69  E-value=0.023  Score=49.21  Aligned_cols=85  Identities=14%  Similarity=0.115  Sum_probs=56.9

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHHHH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLI  265 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~  265 (314)
                      +|.|+|+|.+|...+..+.. |.+|+++++++++.+++.+. |.... .  .    .+....+|+||.++.....+...+
T Consensus         3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~-g~~~~-~--~----~~~~~~~D~vi~~v~~~~~~~~v~   73 (289)
T 2cvz_A            3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEE-FGSEA-V--P----LERVAEARVIFTCLPTTREVYEVA   73 (289)
T ss_dssp             CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHH-HCCEE-C--C----GGGGGGCSEEEECCSSHHHHHHHH
T ss_pred             eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHC-CCccc-C--H----HHHHhCCCEEEEeCCChHHHHHHH
Confidence            58899999999988888877 99999999988877666543 54432 1  1    123346899999988664244433


Q ss_pred             H----hhccCCEEEEEcC
Q 021300          266 G----LLKSQGKLVLVGA  279 (314)
Q Consensus       266 ~----~l~~~G~~v~~G~  279 (314)
                      +    .++++..++.++.
T Consensus        74 ~~l~~~l~~~~~vv~~s~   91 (289)
T 2cvz_A           74 EALYPYLREGTYWVDATS   91 (289)
T ss_dssp             HHHTTTCCTTEEEEECSC
T ss_pred             HHHHhhCCCCCEEEECCC
Confidence            3    3445555555543

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=95.69  E-value=0.018  Score=50.76  Aligned_cols=96  Identities=20%  Similarity=0.143  Sum_probs=61.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcC--------Cc-EEecCCCHHHHHHHcCCccEE
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLG--------AD-SFLVSRDQDEMQAAMGTMDGI  251 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~g--------a~-~~v~~~~~~~~~~~~~~~d~v  251 (314)
                      ..+.+||++|+|. |..+..+++..+ .+++.++.+++..+.+.+.+.        .. .++..+..+.+....+.||+|
T Consensus        94 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I  172 (304)
T 2o07_A           94 PNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI  172 (304)
T ss_dssp             SSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred             CCCCEEEEECCCc-hHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence            5668999998754 666777777654 589999998877655544332        11 222222223343334579998


Q ss_pred             EEccCC----------cccHHHHHHhhccCCEEEEEc
Q 021300          252 IDTVSA----------VHPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       252 ~d~~g~----------~~~~~~~~~~l~~~G~~v~~G  278 (314)
                      +-....          ...+..+.+.|+++|.++.-.
T Consensus       173 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  209 (304)
T 2o07_A          173 ITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  209 (304)
T ss_dssp             EEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             EECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence            854332          224778899999999998764

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=95.69  E-value=0.064  Score=48.90  Aligned_cols=79  Identities=18%  Similarity=0.115  Sum_probs=51.5

Q ss_pred             CCC-CCCCEEEEEcC-ChHHHHHHHHHHH-CCCeEEEEeCChhh---------------HHHHHHHcCCcEEe---cCCC
Q 021300          179 GLD-KPGMHVGVVGL-GGLGHVAVKFAKA-MGVKVTVISTSPSK---------------KSEAIERLGADSFL---VSRD  237 (314)
Q Consensus       179 ~~~-~~g~~vlI~Ga-g~vG~~a~~~a~~-~g~~vi~v~~~~~~---------------~~~~~~~~ga~~~v---~~~~  237 (314)
                      +.+ ..|.++||.|+ +++|.+.+..+.. .|++|+++.+..+.               ..+..++.|.....   |-.+
T Consensus        41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd  120 (405)
T 3zu3_A           41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFS  120 (405)
T ss_dssp             CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTS
T ss_pred             CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCC
Confidence            334 45677788887 9999998888887 89999988765432               12234556654322   3344


Q ss_pred             HHHHH-------HHcCCccEEEEccCC
Q 021300          238 QDEMQ-------AAMGTMDGIIDTVSA  257 (314)
Q Consensus       238 ~~~~~-------~~~~~~d~v~d~~g~  257 (314)
                      ++.+.       +..+.+|++++++|.
T Consensus       121 ~~~v~~~v~~i~~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          121 DEIKQLTIDAIKQDLGQVDQVIYSLAS  147 (405)
T ss_dssp             HHHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence            43222       223579999999875

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=95.68  E-value=0.019  Score=49.53  Aligned_cols=98  Identities=16%  Similarity=0.216  Sum_probs=66.9

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCChhhHHHHHHHc----CCc-EEecCCCHHHHHHH-cCCccEE
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERL----GAD-SFLVSRDQDEMQAA-MGTMDGI  251 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~--g~~vi~v~~~~~~~~~~~~~~----ga~-~~v~~~~~~~~~~~-~~~~d~v  251 (314)
                      .++++++||-+|+| .|..+..+++..  +.+++.++.++...+.+.+.+    |.+ .-+...+...  .. .+.||+|
T Consensus       107 ~~~~~~~VLD~G~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~--~~~~~~fD~V  183 (275)
T 1yb2_A          107 GLRPGMDILEVGVG-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD--FISDQMYDAV  183 (275)
T ss_dssp             CCCTTCEEEEECCT-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT--CCCSCCEEEE
T ss_pred             CCCCcCEEEEecCC-CCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc--cCcCCCccEE
Confidence            46899999999987 377778888863  579999999987765554433    432 1122222111  11 2469999


Q ss_pred             EEccCCc-ccHHHHHHhhccCCEEEEEcCC
Q 021300          252 IDTVSAV-HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       252 ~d~~g~~-~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      +-..... ..+..+.+.|+++|+++.....
T Consensus       184 i~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  213 (275)
T 1yb2_A          184 IADIPDPWNHVQKIASMMKPGSVATFYLPN  213 (275)
T ss_dssp             EECCSCGGGSHHHHHHTEEEEEEEEEEESS
T ss_pred             EEcCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            9866543 4588899999999999988653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	314
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	2e-31
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	2e-22
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	8e-21
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	8e-21
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	3e-18
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	6e-18
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	4e-17
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	2e-16
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	7e-16
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	2e-14
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	3e-14
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	4e-14
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	8e-14
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	1e-13
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	7e-13
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	1e-12
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	4e-12
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	4e-12
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	9e-12
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	2e-11
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	2e-11
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	3e-11
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	5e-11
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	9e-11
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	1e-10
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	2e-10
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	1e-09
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	1e-09
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	1e-08
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	1e-07
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	2e-06
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	3e-06
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	2e-05
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	1e-04
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	1e-04
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	3e-04
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	0.002
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	0.003

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  114 bits (286), Expect = 2e-31
 Identities = 63/185 (34%), Positives = 95/185 (51%), Gaps = 6/185 (3%)

Query: 9   HPKNAFGWAAKDTSGVLSP--FHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIY 66
           +P+   G A +      +P    +  +   + D+  K+  CG+C SD+H     WGN   
Sbjct: 3   YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKM 62

Query: 67  PIVPGHEIVGVVTEVGSKVSK-FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
           P+V GHEIVG V ++G K +   KVG +VGVG  V SC  CD C  D E YC K + TY+
Sbjct: 63  PLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYS 122

Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI-TVYSPLRFYGLDKPG 184
             Y DG ++ GGY++ +   EHFVV IPE   ++   P+  AG+   +  +    + +  
Sbjct: 123 QPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVET-LPVGEAGVHEAFERMEKGDV-RYR 180

Query: 185 MHVGV 189
             +  
Sbjct: 181 FTLVG 185

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 90.0 bits (222), Expect = 2e-22
 Identities = 65/158 (41%), Positives = 87/158 (55%), Gaps = 2/158 (1%)

Query: 17  AAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVG 76
            A      L P   +RR  G  DV  ++ +CG+CHSDLH +++EW  T+YP VPGHEIVG
Sbjct: 5   GAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVG 64

Query: 77  VVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT-ITY 135
            V  VG +V K+  GD VGVGC+V SC+ C+ C   LENYC  +  TY +   D    T 
Sbjct: 65  RVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTL 124

Query: 136 GGYSDIMVADEHFVVRIPEG-TPLDATAPLLCAGITVY 172
           GGYS  +V  E +V+RI      +     +  A   + 
Sbjct: 125 GGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERML 162

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 86.1 bits (212), Expect = 8e-21
 Identities = 33/169 (19%), Positives = 57/169 (33%), Gaps = 18/169 (10%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
              +V  K+    +CH+D + +        +P++ GH   G+V  VG  V+K K GD V 
Sbjct: 30  KAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKAGDTV- 88

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY--------------GGYSDI 141
           +   +  C  C  C     N C K+ +T          +                 +S+ 
Sbjct: 89  IPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEY 148

Query: 142 MVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 190
            V  +  V +I     +D       +   +        L   G  +  V
Sbjct: 149 TVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFE---LMHSGKSIRTV 194

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 86.1 bits (212), Expect = 8e-21
 Identities = 35/166 (21%), Positives = 59/166 (35%), Gaps = 15/166 (9%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
              ++  K+   G+CH+DL+ +        +P+V GHE  G+V  VG  V++F+ G+KV 
Sbjct: 32  HANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKV- 90

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD--------------GTITYGGYSDI 141
           +   +  C  C  C     N C K     +                     +    +S  
Sbjct: 91  IPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQY 150

Query: 142 MVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHV 187
            V ++  V +I     LD          +V   +      K    V
Sbjct: 151 TVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTV 196

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 78.8 bits (193), Expect = 3e-18
 Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 10/156 (6%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           G   V  K+   G+CH+DLH  + +W      P +PGHE VG V  VGS V++ K GD+V
Sbjct: 29  GPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVKEGDRV 88

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
           G+  +  +C  C+ C    E  C     T  +           Y++ ++AD ++V  +P+
Sbjct: 89  GIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGG-------YAEYVLADPNYVGILPK 141

Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 190
                     L     +   +R       G  V  +
Sbjct: 142 NVKATIHPGKLDDINQILDQMR--AGQIEGRIVLEM 175

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 78.4 bits (192), Expect = 6e-18
 Identities = 37/174 (21%), Positives = 63/174 (36%), Gaps = 23/174 (13%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
              +V  +V    +C +D++    +    ++P+V GHE  G+V  VG  V+ FK GDKV 
Sbjct: 32  KACEVRIQVIATCVCPTDINATDPKK-KALFPVVLGHECAGIVESVGPGVTNFKPGDKV- 89

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKV------------------IMTYANKYHDGTITYGG 137
           +      C+ C  C   L N C K+                    T   +     +    
Sbjct: 90  IPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSS 149

Query: 138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 191
           +S   V  E  + R+ +   LD          ++   +    L K G  +  + 
Sbjct: 150 FSQYTVVSEANLARVDDEFDLDLLVTHALPFESINDAID---LMKEGKSIRTIL 200

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 76.1 bits (186), Expect = 4e-17
 Identities = 28/177 (15%), Positives = 48/177 (27%), Gaps = 12/177 (6%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
            E  V  KV    IC SD HM++     T    +     +        +  +      + 
Sbjct: 31  IEHGVILKVVSTNICGSDQHMVRGRT--TAQVGLVLGHEITGEVIEKGRDVENLQIGDLV 88

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYAN---KYHDGTITYGGYSDIMV--ADEHFVV 150
                 +C  C SC       C  V    A     Y D     GG ++ ++    +  ++
Sbjct: 89  SVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLL 148

Query: 151 RIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG 207
           ++P+         +               LD      G    G      +   K   
Sbjct: 149 KLPDRDKAMEKINIAEVVGVQV-----ISLDDAPRGYGEFDAGVPKKFVIDPHKTFS 200

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 73.8 bits (180), Expect = 2e-16
 Identities = 33/193 (17%), Positives = 61/193 (31%), Gaps = 44/193 (22%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
              +V  KV   G+CH+DL +   ++     P V GHE  G++  +G  V++ +VGD V 
Sbjct: 27  QGDEVLVKVVATGMCHTDLIVRDQKY-PVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVV 85

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTY----------------ANKYHDGTITYGGYS 139
           +      C  C  C      YC +                         +D       ++
Sbjct: 86  LSYGY--CGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFA 143

Query: 140 DIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVA 199
              ++ E+  V++ +  P D                                   +   A
Sbjct: 144 TYALSRENNTVKVTKDFPFDQLVKFYAF-------------------------DEINQAA 178

Query: 200 VKFAKAMGVKVTV 212
           +   K + +K  +
Sbjct: 179 IDSRKGITLKPII 191

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 71.9 bits (175), Expect = 7e-16
 Identities = 67/141 (47%), Positives = 84/141 (59%), Gaps = 2/141 (1%)

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 215
             L A APLLCAGIT YSPLR +    PG  VGVVG+GGLGH+ +K A AMG  V    T
Sbjct: 4   EQLAAVAPLLCAGITTYSPLRHWQA-GPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAF-T 61

Query: 216 SPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLV 275
           +   K EA + LGAD  + SR+ DEM A + + D I++TV+A H L     LLK  G + 
Sbjct: 62  TSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMT 121

Query: 276 LVGAPEKPLELPAFSLLMGEE 296
           LVGAP  P + P    L+ + 
Sbjct: 122 LVGAPATPHKSPEVFNLIMKR 142

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 68.1 bits (165), Expect = 2e-14
 Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 12/157 (7%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVP-GHEIVGVVTEVGSKVSKFKVGDKV 94
              +V  ++  CG+CH+DLH    +W       +  GHE VG+V EVG  V+  KVGD+V
Sbjct: 24  SYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRV 83

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
           G+  +  +C  CD C    E  C        ++ + G    GGY++   A   +VV+IP+
Sbjct: 84  GIPWLYSACGHCDYCLSGQETLCE-------HQKNAGYSVDGGYAEYCRAAADYVVKIPD 136

Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 191
            T ++   PL          L+       G  V  + 
Sbjct: 137 NTIIEV-QPLEKINEVFDRMLKG---QINGRVVLTLE 169

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 67.7 bits (164), Expect = 3e-14
 Identities = 37/159 (23%), Positives = 54/159 (33%), Gaps = 11/159 (6%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGN---TIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
            E +V  ++ + GIC SD+H  ++          P+V GHE  G V +VG  V   K GD
Sbjct: 24  KEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGD 83

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
           +V V   V  CR C  C     N CP +              Y       V    F  ++
Sbjct: 84  RVAVEPGV-PCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARY------YVHAADFCHKL 136

Query: 153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 191
           P+   +                       K    + V+ 
Sbjct: 137 PDNCNVKQLVTHSFKLEQTVDAFEAARK-KADNTIKVMI 174

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 66.9 bits (162), Expect = 4e-14
 Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 5/142 (3%)

Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
           P    APLLC G+TVYSPL   G   PG  VG+VGLGG+G +    +KAM    T + + 
Sbjct: 2   PSHLAAPLLCGGLTVYSPLVRNGC-GPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISR 59

Query: 217 PSKKSEAIERLGADSFLVSRDQDEM-QAAMGTMDGIIDTVSAVHPLMP--LIGLLKSQGK 273
            S+K E   ++GAD ++ + ++ +  +    T D I+   S++  +    +   +K  G+
Sbjct: 60  SSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGR 119

Query: 274 LVLVGAPEKPLELPAFSLLMGE 295
           +V +  PE+   L      +  
Sbjct: 120 IVSISIPEQHEMLSLKPYGLKA 141

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 66.8 bits (162), Expect = 8e-14
 Identities = 39/176 (22%), Positives = 60/176 (34%), Gaps = 26/176 (14%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
              +V  K+   GIC SD  ++K    +    I  GHE VGVV  +G+ V+  K GDKV 
Sbjct: 32  KAHEVRIKILASGICGSDSSVLKEIIPSKFPVI-LGHEAVGVVESIGAGVTCVKPGDKV- 89

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGTITY-------------GGYSDI 141
           +   V  C SC +C     N+C K  M        D T  +               +++ 
Sbjct: 90  IPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEY 149

Query: 142 MVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGH 197
            V  +  V +I     ++           +               +   G G    
Sbjct: 150 TVVADIAVAKIDPKINVNFLVSTKLTLDQI----------NKAFELLSSGQGVRSI 195

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 65.6 bits (159), Expect = 1e-13
 Identities = 33/143 (23%), Positives = 52/143 (36%), Gaps = 9/143 (6%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
               +  ++   G+C SD+HM + E      PI+ GHE  G V EV  +           
Sbjct: 28  PRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKP 87

Query: 96  VGCMVGS----CRSCDSCAIDLENYCPK--VIMTYANKYHDGTITYGGYSDIMVAD-EHF 148
              +V +    C  C  C +  E Y      +        +     G YS  +V D E  
Sbjct: 88  GDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETD 147

Query: 149 VVRIPEGTPLDATAPLLCAGITV 171
           V+++ E   +    PL  A   +
Sbjct: 148 VLKVSEK--ITHRLPLKEANKAL 168

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 63.8 bits (154), Expect = 7e-13
 Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 6/145 (4%)

Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
           P++   PL C   T            P       G G +G  A+  AK  G  + +    
Sbjct: 2   PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDI 61

Query: 217 PSKKSEAIERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQG 272
              + E  ++LGA   + S+ QD + A      G ++  +++  +   L   +  L   G
Sbjct: 62  VESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILG 121

Query: 273 KLVLVGAPEKP--LELPAFSLLMGE 295
           K+ +VGAP+     +     LL+G 
Sbjct: 122 KIAVVGAPQLGTTAQFDVNDLLLGG 146

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.4 bits (153), Expect = 1e-12
 Identities = 31/162 (19%), Positives = 56/162 (34%), Gaps = 16/162 (9%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTI---YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  ++   GIC SD+H  +           P+V GHE  G V +VGS V   K GD
Sbjct: 30  GPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGD 89

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
           +V +        + + C +   N  P +              +         +  F  ++
Sbjct: 90  RVAIEPGA-PRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRF------YKHNAAFCYKL 142

Query: 153 PEGTPLDATAPL-LCAGITVYSPLRFYGLDKPGMHVGVVGLG 193
           P+      T    L   +  +   +       G+ + ++   
Sbjct: 143 PDNVKPLVTHRFPLEKALEAFETFKK----GLGLKI-MLKCD 179

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 62.2 bits (150), Expect = 4e-12
 Identities = 38/172 (22%), Positives = 57/172 (33%), Gaps = 23/172 (13%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
              +V  K+   GIC SD H++       +  I   HE  G+V  +G  V+  + GDKV 
Sbjct: 32  KAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIAG-HEAAGIVESIGEGVTTVRPGDKV- 89

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY--------------GGYSDI 141
           +      C  C  C     N+C K  ++          +                 +S  
Sbjct: 90  IPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQY 149

Query: 142 MVADEHFVVRIPEGTPLD--ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 191
            V DE  V +I     LD   T  L    I          L + G  +  + 
Sbjct: 150 TVVDEISVAKIDAAFALDPLITHVLPFEKINEGF-----DLLRSGESIRTIL 196

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 61.4 bits (148), Expect = 4e-12
 Identities = 33/144 (22%), Positives = 48/144 (33%), Gaps = 8/144 (5%)

Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
           PL++   + C   T Y          PG    V GLGG+G  A+   KA G    +   +
Sbjct: 2   PLES-CLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGT 60

Query: 217 PSKKSEAIERLGADSFLVSRDQDEMQAAM-------GTMDGIIDTVSAVHPLMPLIGLLK 269
              K      LGA   L  +D D+    +       G    +         +  L     
Sbjct: 61  HKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYC 120

Query: 270 SQGKLVLVGAPEKPLELPAFSLLM 293
             G  V++G       LP   LL+
Sbjct: 121 GSGVTVVLGLASPNERLPLDPLLL 144

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 60.3 bits (145), Expect = 9e-12
 Identities = 30/145 (20%), Positives = 51/145 (35%), Gaps = 7/145 (4%)

Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
            L+    + C   + Y          PG    V GLG +G  A+   K  G    +    
Sbjct: 2   NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDI 61

Query: 217 PSKKSEAIERLGADSFLVSRDQDEMQAAM------GTMDGIIDTVSAVHPLMPLI-GLLK 269
             +K    + LGA   L  R+ D+    +      G +D  +D       L   +   + 
Sbjct: 62  NGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVL 121

Query: 270 SQGKLVLVGAPEKPLELPAFSLLMG 294
             G   +VGA    + +P   +++G
Sbjct: 122 GWGSCTVVGAKVDEMTIPTVDVILG 146

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 60.0 bits (144), Expect = 2e-11
 Identities = 35/165 (21%), Positives = 58/165 (35%), Gaps = 14/165 (8%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  D   +      C SD+H +          ++ GHE VG V EVGS+V  FK GD+V 
Sbjct: 23  GSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGDRVI 82

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
           V C     RS +  A   ++    +     + + D    +G Y  +  AD   +  +P+ 
Sbjct: 83  VPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKD--GVFGEYFHVNDAD-MNLAILPKD 139

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAV 200
             L      +  G                  + ++       +  
Sbjct: 140 VDLSKLVTHVYHGFD-----------HIEEALLLMKDKPKDLIKA 173

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 59.3 bits (142), Expect = 2e-11
 Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 13/160 (8%)

Query: 33  RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP---IVPGHEIVGVVTEVGSKVSKFK 89
           R  G  DV  ++   G+CH+DLH+++  W   + P      GHE VG + EV   V   +
Sbjct: 21  RLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE 80

Query: 90  VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149
            GD V +   V +  +C +C    + +C  +          G    GG+++ M      V
Sbjct: 81  KGDPVILHPAV-TDGTCLACRAGEDMHCENLEFP-------GLNIDGGFAEFMRTSHRSV 132

Query: 150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV 189
           +++P+   ++     L     V   L    +   G  V +
Sbjct: 133 IKLPKDVRVEVDIHKLDEINDVLERLEKGEV--LGRAVLI 170

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 59.2 bits (142), Expect = 3e-11
 Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 6/123 (4%)

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 215
           +PL+    + C   T Y           G    V GLGG+G   +   KA G    +   
Sbjct: 1   SPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVD 60

Query: 216 SPSKKSEAIERLGADSFLVSRDQDE------MQAAMGTMDGIIDTVSAVHPLMPLIGLLK 269
               K    + +GA   +  +D  +       + + G +D   + +  +  ++  +   +
Sbjct: 61  INKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQ 120

Query: 270 SQG 272
              
Sbjct: 121 EAY 123

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 5e-11
 Identities = 29/144 (20%), Positives = 47/144 (32%), Gaps = 7/144 (4%)

Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
           P +    + C   T Y      G  KPG    V GLGG+G   +   K+ G    +    
Sbjct: 3   PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDL 62

Query: 217 PSKKSEAIERLGADSFLVSRDQDEMQAAMGT-------MDGIIDTVSAVHPLMPLIGLLK 269
              K E    +GA   +  +D  +  + + +                    +  L     
Sbjct: 63  NKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHM 122

Query: 270 SQGKLVLVGAPEKPLELPAFSLLM 293
           + G  V+VG P     L    +L+
Sbjct: 123 NYGTSVVVGVPPSAKMLTYDPMLL 146

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 57.7 bits (138), Expect = 9e-11
 Identities = 37/154 (24%), Positives = 57/154 (37%), Gaps = 17/154 (11%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTI--------YPIVPGHEIVGVVTEVGSKVSK 87
               V  KV   G+CHSD+HM +  +GN           P+  GHEI G + EVG +V  
Sbjct: 24  KGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVG 83

Query: 88  FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSD-IMVADE 146
           +  GD V          +C  C I  E+ C             G    G Y++ ++V   
Sbjct: 84  YSKGDLV-AVNPWQGEGNCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHY 135

Query: 147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
            ++ ++    P+      L         L  +  
Sbjct: 136 KYMYKLRRVKPMITKTMKLEEANEAIDNLENFKA 169

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 57.3 bits (137), Expect = 1e-10
 Identities = 36/146 (24%), Positives = 51/146 (34%), Gaps = 7/146 (4%)

Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
           PLD    L C   T +         +PG    V GLG +G  AV    + G K  +    
Sbjct: 2   PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDL 61

Query: 217 PSKKSEAIERLGADSFLVSRDQDE------MQAAMGTMDGIIDTVSAVHPLMPLIGL-LK 269
              K E  +  GA  F+   D  E       +   G +D  ++ V  V  +   +   LK
Sbjct: 62  NPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLK 121

Query: 270 SQGKLVLVGAPEKPLELPAFSLLMGE 295
             G  VLVG  +          L+  
Sbjct: 122 GWGVSVLVGWTDLHDVATRPIQLIAG 147

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 56.9 bits (136), Expect = 2e-10
 Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 10/149 (6%)

Query: 158 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217
           LD  A  +C+G T Y     Y     G  V + G G LG   V  A+++G +  ++    
Sbjct: 3   LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGS 62

Query: 218 SKKSEAIERLGADSFLVSRDQDEMQAAMGTM--------DGIIDTVSAVHPLMPLIGLLK 269
             + +  E +GAD  L  R+    +     M        D I++       L+    LL+
Sbjct: 63  PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLR 122

Query: 270 SQGKLVLVG--APEKPLELPAFSLLMGEE 296
             G   + G   P+ P+    +  L+ + 
Sbjct: 123 RGGFYSVAGVAVPQDPVPFKVYEWLVLKN 151

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 54.2 bits (129), Expect = 1e-09
 Identities = 24/115 (20%), Positives = 39/115 (33%), Gaps = 6/115 (5%)

Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
           PLD    L C   T Y         +PG    V GLGG+G   +   K  G    +    
Sbjct: 2   PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDI 61

Query: 217 PSKKSEAIERLGADSFLVSRDQDE------MQAAMGTMDGIIDTVSAVHPLMPLI 265
              K    +  GA   +  +D  +      ++   G +D   + +  V  +   +
Sbjct: 62  NKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAAL 116

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 54.3 bits (129), Expect = 1e-09
 Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 5/142 (3%)

Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
                AP+LCAG+TVY  L+     +PG  V + G+GGLGHVAV++A+AMG+ V  I   
Sbjct: 2   EFAEIAPILCAGVTVYKGLKQTNA-RPGQWVAISGIGGLGHVAVQYARAMGLHVAAIDID 60

Query: 217 PSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG---IIDTVSAVHPLMPLIGLLKSQGK 273
            +K  E   +LGA   + +R +D ++A    + G   ++ T  +       IG+ +  G 
Sbjct: 61  DAKL-ELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGT 119

Query: 274 LVLVGAPEKPLELPAFSLLMGE 295
           + LVG P      P F +++  
Sbjct: 120 IALVGLPPGDFPTPIFDVVLKG 141

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 51.9 bits (123), Expect = 1e-08
 Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 6/143 (4%)

Query: 158 LDATAPLLCAGITVYSPLRFYGLD-KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
           L   APL  AGIT Y  ++       PG +V +VG+GGLGH+AV+  K M     +    
Sbjct: 6   LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDV 65

Query: 217 PSKKSEAIERLGADSFLVSRDQDE----MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQG 272
             +K +  ERLGAD  + +R               ++  +D V +   +     LL   G
Sbjct: 66  KEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMG 125

Query: 273 KLVLVGAPEKPLELPAFSLLMGE 295
           +L++VG   +    P   ++  E
Sbjct: 126 RLIIVGYGGEL-RFPTIRVISSE 147

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 48.6 bits (114), Expect = 1e-07
 Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 3/141 (2%)

Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
             +  AP+ CAG+T Y  L+  G  KPG  V + G+GGLGHVAV++AKAMG+ V  +   
Sbjct: 2   SFEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIG 60

Query: 217 PSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG--IIDTVSAVHPLMPLIGLLKSQGKL 274
             K   A E          ++                + T  +          ++  G  
Sbjct: 61  DEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGAC 120

Query: 275 VLVGAPEKPLELPAFSLLMGE 295
           VLVG P + + +P F  ++  
Sbjct: 121 VLVGLPPEEMPIPIFDTVLNG 141

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 45.3 bits (106), Expect = 2e-06
 Identities = 26/148 (17%), Positives = 48/148 (32%), Gaps = 10/148 (6%)

Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
           PL+    +     T +       + + G  V V+G+G +G + +  AK  G    +   S
Sbjct: 2   PLENAVMITDMMTTGFHGAELADI-EMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60

Query: 217 PSKKSEAIERLGADSFLVSRDQDEMQAAMGT-----MDGIIDTVSAVHPLMPLIGLLKSQ 271
                EA +  GA   L  ++       M       +D +I        L   + ++K  
Sbjct: 61  RPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG 120

Query: 272 GKLVLVGAPEKPLELP----AFSLLMGE 295
           G +  +        L      +   M  
Sbjct: 121 GIISNINYHGSGDALLIPRVEWGCGMAH 148

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 44.5 bits (104), Expect = 3e-06
 Identities = 23/166 (13%), Positives = 40/166 (24%), Gaps = 33/166 (19%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
            +  V  KV + GI + D    K                                     
Sbjct: 29  PKDGVLIKVAYSGINYKDGLAGKAGGNIVREY---------------------------- 60

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
              ++    +  +     +    +     A  Y  G    GG S+       ++V +P+ 
Sbjct: 61  --PLILGIDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQN 118

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 201
             L          I           + PG    ++     G V VK
Sbjct: 119 LSLKEAMVDQLLTIVDREVSL---EETPGALKDILQNRIQGRVIVK 161

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 42.0 bits (97), Expect = 2e-05
 Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 8/146 (5%)

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVIS 214
             ++A APL C+GIT Y  +R   L  P   + VVG  GGLG +AV+ AKA+     +  
Sbjct: 2   NAVEA-APLTCSGITTYRAVRKASL-DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGV 59

Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQA-----AMGTMDGIIDTVSAVHPLMPLIGLLK 269
               +  EA +R GAD  + +  QD +           +D +ID  ++   L      L 
Sbjct: 60  DVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALA 119

Query: 270 SQGKLVLVGAPEKPLELPAFSLLMGE 295
            QGK V+VG     L   A  + + E
Sbjct: 120 KQGKYVMVGLFGADLHYHAPLITLSE 145

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 39.4 bits (91), Expect = 1e-04
 Identities = 10/89 (11%), Positives = 27/89 (30%), Gaps = 5/89 (5%)

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIM-----TYANKYHDGTITYGGYSDIMVADEH 147
           +V    +  +       A     + P +           + +   +  GG ++ +   + 
Sbjct: 31  RVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVEGRRYAALVPQGGLAERVAVPKG 90

Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLR 176
            ++ +PEG P+             +  L 
Sbjct: 91  ALLPLPEGRPVVGPVFPFAEAEAAFRALL 119

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 39.6 bits (91), Expect = 1e-04
 Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 10/123 (8%)

Query: 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241
           + G  V V+G G +G V+V  AKA      V +    ++ E  +  GAD  LV     E 
Sbjct: 25  QLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEE 83

Query: 242 QAAMGTM---------DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLL 292
           ++++            +  ID       +   I + ++ G L+LVG   + + +P  +  
Sbjct: 84  ESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNAC 143

Query: 293 MGE 295
             E
Sbjct: 144 ARE 146

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 38.5 bits (88), Expect = 3e-04
 Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 6/117 (5%)

Query: 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKK 220
           A     G+TVY  LR     KP          G +G +A ++AKA+G K+     +  K 
Sbjct: 7   AASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA 66

Query: 221 SEAIERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGK 273
             A++  GA   +  R++D ++       G    ++            +  L+ +G 
Sbjct: 67  QSALKA-GAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGL 122

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (82), Expect = 0.002
 Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 7/121 (5%)

Query: 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241
             G  V V G G +G V +  AKAMG    V++   + +    + +GAD  L    +   
Sbjct: 25  TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQ 84

Query: 242 QAAM-------GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMG 294
           + A           +  I+   A   +   I   +S G LVLVG   +   +P     + 
Sbjct: 85  EIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIR 144

Query: 295 E 295
           E
Sbjct: 145 E 145

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 35.2 bits (80), Expect = 0.003
 Identities = 20/136 (14%), Positives = 37/136 (27%), Gaps = 32/136 (23%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI-VPGHEIVGVVTEVGSKVSKFKVGDKV 94
            E DVT  V    + + D   I  +         +PG +  G V    S+  +F  G +V
Sbjct: 26  PEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRT--SEDPRFHAGQEV 83

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
            +                                      +GG ++       ++V +P+
Sbjct: 84  LLTGWGVGEN-----------------------------HWGGLAEQARVKGDWLVAMPQ 114

Query: 155 GTPLDATAPLLCAGIT 170
           G      +        
Sbjct: 115 GQAAKEISLSEAPNFA 130

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	314
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	100.0
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	100.0
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	100.0
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	100.0
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	100.0
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	100.0
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	100.0
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	100.0
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	100.0
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	100.0
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.98
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.98
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.97
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.97
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.97
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.97
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.97
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.97
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.96
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.94
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.93
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.92
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.91
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.9
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.9
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.9
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.9
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.89
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.89
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.89
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.88
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.88
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.87
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.87
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.87
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.87
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.87
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.87
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.86
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.86
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.86
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.86
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.85
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.85
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.85
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.85
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.83
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.81
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.81
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.8
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.78
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.76
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.6
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.59
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.34
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.48
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.26
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.15
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	98.1
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	98.01
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	98.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.97
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.96
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.92
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.91
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.86
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.82
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.81
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.79
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.78
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.77
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.77
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.74
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.74
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.71
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.7
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.7
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.68
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.68
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.68
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.68
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.67
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.65
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.63
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.62
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.61
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.61
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.61
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.6
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.59
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.58
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.58
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.56
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.55
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.53
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.52
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.49
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.47
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	97.46
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.42
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.39
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.38
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.37
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.33
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.32
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.32
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.3
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.29
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.26
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	97.24
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.23
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.21
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.18
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.13
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.11
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.09
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	97.08
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	97.08
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.08
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.07
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.07
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	97.06
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.04
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.01
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.99
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.98
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.98
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.91
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.91
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.9
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.9
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.89
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	96.89
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.87
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.86
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.82
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.77
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	96.71
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.69
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	96.68
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	96.68
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	96.59
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	96.58
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.57
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	96.55
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.52
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	96.46
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.46
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.41
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.35
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	96.34
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	96.25
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.21
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	96.21
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.2
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.19
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.15
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	96.12
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.1
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	96.03
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	96.01
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	96.0
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.0
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.98
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	95.96
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.96
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	95.95
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	95.94
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.93
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.89
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.89
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.88
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.85
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.8
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.78
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.75
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	95.68
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	95.62
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.56
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.55
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.52
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	95.47
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.46
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.45
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.43
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.43
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.42
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.38
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.37
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	95.32
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	95.27
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	95.27
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.25
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	95.03
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	94.97
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.95
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	94.95
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.95
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	94.9
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	94.88
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	94.85
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.84
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	94.82
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.8
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	94.62
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.61
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.58
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	94.57
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	94.55
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	94.55
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	94.52
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	94.51
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.51
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	94.5
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.48
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	94.48
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.46
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	94.41
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	94.38
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	94.26
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.17
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	94.12
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.12
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.11
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	94.1
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.03
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	94.02
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.97
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	93.94
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.92
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.92
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	93.91
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	93.91
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	93.85
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.81
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.78
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.75
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.74
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	93.69
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	93.64
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	93.49
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	93.49
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	93.43
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	93.37
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	93.32
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.32
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	93.3
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.3
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	93.3
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	93.28
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	93.25
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	93.24
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	93.2
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	93.12
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	93.1
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.09
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	93.05
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	93.02
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.93
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	92.92
d1k3ta1	190	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.84
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	92.8
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	92.79
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.74
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	92.73
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	92.71
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	92.62
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	92.61
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	92.57
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	92.52
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	92.47
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	92.34
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.32
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.28
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	92.27
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	92.08
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	92.07
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	92.06
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	91.98
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	91.97
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	91.91
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	91.91
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	91.87
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	91.71
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	91.69
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	91.63
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	91.59
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	91.57
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	91.56
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	91.56
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	91.52
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	91.51
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	91.47
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	91.45
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	91.44
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	91.32
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	91.32
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	91.15
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	91.15
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	91.15
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	91.14
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	91.03
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	90.93
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	90.87
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	90.76
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	90.69
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	90.69
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	90.53
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	90.52
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	90.46
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	90.44
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	90.37
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	90.25
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	90.21
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	90.17
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	90.01
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	90.0
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	89.98
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	89.93
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	89.78
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	89.59
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	89.57
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	89.55
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	89.55
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	89.55
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	89.5
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	89.49
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	89.45
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	89.39
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	89.36
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	89.26
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	89.18
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	89.15
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	89.0
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	88.82
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	88.73
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	88.7
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	88.7
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	88.64
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	88.55
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	88.46
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	88.19
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	88.17
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	88.16
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	88.16
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	88.01
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	88.01
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	87.82
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	87.61
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	87.57
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	87.32
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	87.28
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	87.19
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	86.89
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	86.74
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	86.54
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	86.34
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	86.28
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	86.24
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	86.19
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	86.02
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	85.92
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	85.86
d2cula1	230	GidA-related protein TTHA1897 {Thermus thermophilu	85.81
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	85.69
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	85.61
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	85.55
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	85.43
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	85.29
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	85.24
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	85.16
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	84.58
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	84.37
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	84.24
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	84.1
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	83.93
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	83.44
d1mo9a1	261	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	83.39
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	83.16
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	83.09
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	83.09
d1euca1	130	Succinyl-CoA synthetase, alpha-chain, N-terminal (	82.98
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	82.76
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	82.53
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	82.2
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	82.1
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	81.65
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	81.61
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	81.6
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	81.31
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	81.2
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	81.13
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	80.94
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	80.91
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	80.91
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	80.74
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	80.61
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	80.37
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	80.04

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.6e-36  Score=251.58  Aligned_cols=184  Identities=32%  Similarity=0.565  Sum_probs=166.1

Q ss_pred             CCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCC
Q 021300            6 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKV   85 (314)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   85 (314)
                      ..|++||++++....+...+++.+++.++++|+||||||.++|||++|++++.|.++...+|+++|||++|+|+++|+++
T Consensus         2 ~~P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~~~P~i~GHE~~G~Vv~vG~~v   81 (192)
T d1piwa1           2 SYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKS   81 (192)
T ss_dssp             CTTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTC
T ss_pred             CCCceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCCCCCcCcccccccchhhccccc
Confidence            36889999999887777778888888777899999999999999999999999988878899999999999999999988


Q ss_pred             -CCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCccccccc
Q 021300           86 -SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPL  164 (314)
Q Consensus        86 -~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~  164 (314)
                       +.+++||||++.+....|++|.+|..|+++.|.+....+......|....|+|+||+++++++++++|+++++++|+.+
T Consensus        82 ~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~Aal~  161 (192)
T d1piwa1          82 NSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVG  161 (192)
T ss_dssp             CSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEEEESS
T ss_pred             ccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHHHHHH
Confidence             5699999999999999999999999999999999988877777778889999999999999999999999999887655


Q ss_pred             chhhhhhhhhhHhcCCCCCCCEEEEE
Q 021300          165 LCAGITVYSPLRFYGLDKPGMHVGVV  190 (314)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~vlI~  190 (314)
                      ...+.|||+++.+ +++++|++|||.
T Consensus       162 ~~~~~ta~~~l~~-~~vk~g~~Vvv~  186 (192)
T d1piwa1         162 EAGVHEAFERMEK-GDVRYRFTLVGY  186 (192)
T ss_dssp             HHHHHHHHHHHHH-TCCSSEEEEECC
T ss_pred             HHHHHHHHHHHHH-hCCCCCCEEEEE
Confidence            5557899999975 569999999985

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=1.9e-35  Score=247.23  Aligned_cols=180  Identities=21%  Similarity=0.234  Sum_probs=153.4

Q ss_pred             cccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCC
Q 021300            8 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSK   87 (314)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   87 (314)
                      ++++|+.++...++|  +++++++.|+|+++||||||.++|||++|++++.+......+|.++|||++|+|+++|+++++
T Consensus         6 ~~~~kAav~~~~~~p--l~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~~~p~i~GhE~~G~v~~vG~~v~~   83 (199)
T d1cdoa1           6 VIKCKAAVAWEANKP--LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTE   83 (199)
T ss_dssp             CEEEEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTTCCS
T ss_pred             ceEEEEEEEecCCCC--cEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccccccccccccccceEEEEEcCCCce
Confidence            444556666554444  899999999999999999999999999999999997766788999999999999999999999


Q ss_pred             CCCCCEEEecccccCCCCCccccCCCCCCCCcccccccccc-CC-------------CCccCcccceEEeecCCceEECC
Q 021300           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY-HD-------------GTITYGGYSDIMVADEHFVVRIP  153 (314)
Q Consensus        88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~-~~-------------~~~~~g~~~~~~~v~~~~~~~~p  153 (314)
                      |++||||++.+.. +|++|.+|..|++++|.+......... ..             +....|+|+||+++++++++++|
T Consensus        84 ~~~GdrV~~~~~~-~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP  162 (199)
T d1cdoa1          84 FQPGEKVIPLFIS-QCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKID  162 (199)
T ss_dssp             CCTTCEEEECSSC-CCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECC
T ss_pred             ecCCCEEEEeeec-cccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEECC
Confidence            9999999766555 999999999999999988643322211 11             11235999999999999999999


Q ss_pred             CCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEE
Q 021300          154 EGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV  190 (314)
Q Consensus       154 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~  190 (314)
                      +++++++++++.+++.|++.++...++.+.|++|||+
T Consensus       163 ~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         163 PSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             TTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            9999999999999999999999988888999999984

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=2.7e-35  Score=241.64  Aligned_cols=173  Identities=28%  Similarity=0.467  Sum_probs=155.5

Q ss_pred             CcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCC
Q 021300            7 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKV   85 (314)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v   85 (314)
                      +|++||++++..++++  +++++++.|.|++|||||||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++
T Consensus         2 ~P~tMkA~v~~~~g~p--l~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~v   79 (175)
T d1llua1           2 LPQTMKAAVVHAYGAP--LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGV   79 (175)
T ss_dssp             CCSEEEEEEBCSTTSC--CEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTC
T ss_pred             cchhcEEEEEEeCCCC--CEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCCc
Confidence            6788999999886654  889999999999999999999999999999999998763 4789999999999999999999


Q ss_pred             CCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccc
Q 021300           86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL  165 (314)
Q Consensus        86 ~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~  165 (314)
                      +++++||||++.+....|+.|.+|..|.++.|.+....       |...+|+|+||+++++++++++|++++++.++++.
T Consensus        80 ~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~-------G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~  152 (175)
T d1llua1          80 TRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNT-------GYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKL  152 (175)
T ss_dssp             CSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEECTTTSEECCTTCCCCEEEECG
T ss_pred             cccccCCEEEeccccccCCccccccCCccccccccccc-------ccccccccceEEEechHHEEECCCCCChhHHHHHH
Confidence            99999999998888889999999999999999886543       45678999999999999999999999999888888


Q ss_pred             hhhhhhhhhhHhcCCCCCCCEEEEE
Q 021300          166 CAGITVYSPLRFYGLDKPGMHVGVV  190 (314)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~vlI~  190 (314)
                      ..+.|++.+++ .+. .+|++|||+
T Consensus       153 ~~~~t~~~~~~-~g~-~~G~~VLVl  175 (175)
T d1llua1         153 DDINQILDQMR-AGQ-IEGRIVLEM  175 (175)
T ss_dssp             GGHHHHHHHHH-TTC-CSSEEEEEC
T ss_pred             hHHHHHHHHHH-hCC-CCCCEEEeC
Confidence            88999988885 343 579999985

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=100.00  E-value=1.9e-35  Score=243.14  Aligned_cols=171  Identities=23%  Similarity=0.314  Sum_probs=149.1

Q ss_pred             cccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC---CCCCCCcccccccEEEEEeCCCCC
Q 021300           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG---NTIYPIVPGHEIVGVVTEVGSKVS   86 (314)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~   86 (314)
                      .|+++.+    ++++++++++++|+|+++||||||+++|||++|++++.+...   ..+.|+++|||++|+|+++|++++
T Consensus         2 ~maAVl~----g~~~l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~   77 (178)
T d1e3ja1           2 NLSAVLY----KQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVK   77 (178)
T ss_dssp             CEEEEEE----ETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCC
T ss_pred             ceEEEEE----cCCcEEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccC
Confidence            4666653    244599999999999999999999999999999998876432   236788999999999999999999


Q ss_pred             CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccch
Q 021300           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC  166 (314)
Q Consensus        87 ~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~  166 (314)
                      +|++||||++.+.. +|+.|..|..|.+++|++..+..      +...+|+|+||+.+++++++++|+++++++++.+++
T Consensus        78 ~~~~GdrV~~~~~~-~~~~c~~c~~g~~~~c~~~~~~~------~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~  150 (178)
T d1e3ja1          78 HLKKGDRVAVEPGV-PCRRCQFCKEGKYNLCPDLTFCA------TPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSF  150 (178)
T ss_dssp             SCCTTCEEEECCEE-CCSSSHHHHTTCGGGCTTCEETT------BTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEE
T ss_pred             CCCCCCEEEECccc-ccCCccccccCCcccccccccee------ccccccccceeeeecccceeeCCCCCCHHHHHHHHh
Confidence            99999999876655 89999999999999998876542      234679999999999999999999999999999999


Q ss_pred             hhhhhhhhhHhcCCCCCCCEEEEEcC
Q 021300          167 AGITVYSPLRFYGLDKPGMHVGVVGL  192 (314)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~vlI~Ga  192 (314)
                      .+.|+|++++... +++|++|+|+|+
T Consensus       151 ~~~ta~~a~~~~~-~~~g~~VlVig~  175 (178)
T d1e3ja1         151 KLEQTVDAFEAAR-KKADNTIKVMIS  175 (178)
T ss_dssp             EGGGHHHHHHHHH-HCCTTCSEEEEE
T ss_pred             HHHHHHHHHHHhC-CCCCCEEEEEcc
Confidence            9999999997665 899999999875

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=100.00  E-value=2.9e-34  Score=239.30  Aligned_cols=182  Identities=19%  Similarity=0.210  Sum_probs=155.6

Q ss_pred             CCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCC
Q 021300            6 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKV   85 (314)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   85 (314)
                      +..++||+.++...+++  ++++++|.|+|+++||||||+++|||++|++++.|.+....+|+++|||++|+|+++|+++
T Consensus         2 ~~~~~~kAav~~~~g~~--l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~~~p~v~GhE~~G~V~~vG~~V   79 (197)
T d2fzwa1           2 NEVIKCKAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGV   79 (197)
T ss_dssp             CCCEEEEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTC
T ss_pred             CCceEEEEEEEccCCCC--CEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccccccccCCcceeeEEEeecCCc
Confidence            34567888888775555  9999999999999999999999999999999999987777899999999999999999999


Q ss_pred             CCCCCCCEEEecccccCCCCCccccCCCCCCCCcccccc-cccc-------------CCCCccCcccceEEeecCCceEE
Q 021300           86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY-ANKY-------------HDGTITYGGYSDIMVADEHFVVR  151 (314)
Q Consensus        86 ~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~~~~-------------~~~~~~~g~~~~~~~v~~~~~~~  151 (314)
                      +++++||||++.+.. .|+.|.+|..|.++.|.+..... .+..             ..++...|+|+||+++++.++++
T Consensus        80 ~~~~~GdrV~v~~~~-~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~  158 (197)
T d2fzwa1          80 TKLKAGDTVIPLYIP-QCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAK  158 (197)
T ss_dssp             CSCCTTCEEEECSSC-CCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEE
T ss_pred             eecCCCCEEEEcccc-ccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEE
Confidence            999999999876665 99999999999999998752211 1111             11223358999999999999999


Q ss_pred             CCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEE
Q 021300          152 IPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV  190 (314)
Q Consensus       152 ~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~  190 (314)
                      +|+++++++++++++++.|++.++.+...-+.+++|||+
T Consensus       159 vp~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         159 IDPLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             CCTTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCCCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            999999999999999999999998766656889999884

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=100.00  E-value=1.3e-33  Score=234.59  Aligned_cols=175  Identities=21%  Similarity=0.401  Sum_probs=144.6

Q ss_pred             ccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 021300            9 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKF   88 (314)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   88 (314)
                      +.|++.++...++  +|++++++.|+|++|||||||.++|||++|++++.|.++ .++|+++|||++|+|+++|+++++|
T Consensus         2 k~~~Aav~~~~g~--~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~i~GHE~~G~V~~vG~~v~~~   78 (194)
T d1f8fa1           2 KDIIAAVTPCKGA--DFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTEL   78 (194)
T ss_dssp             EEEEEEEBCSTTC--CCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSC
T ss_pred             ceeEEEEEcCCCC--CcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhccc-ccCCcccccceEEEeeecCccceeE
Confidence            4577777776444  499999999999999999999999999999999998876 4789999999999999999999999


Q ss_pred             CCCCEEEecccccCCCCCccccCCCCCCCCccc-cccccccCCC---------------CccCcccceEEeecCCceEEC
Q 021300           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVI-MTYANKYHDG---------------TITYGGYSDIMVADEHFVVRI  152 (314)
Q Consensus        89 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~-~~~~~~~~~~---------------~~~~g~~~~~~~v~~~~~~~~  152 (314)
                      ++||||+. +.. +|++|.+|.+|++++|++.. ..+.+....+               ....|+|+||.+++..+++++
T Consensus        79 ~vGDrVv~-~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~i  156 (194)
T d1f8fa1          79 QVGDHVVL-SYG-YCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKV  156 (194)
T ss_dssp             CTTCEEEE-CCC-CCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEE
T ss_pred             ccCceeee-ecc-cccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEEC
Confidence            99999954 444 79999999999999999752 2233222111               123489999999999999999


Q ss_pred             CCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEE
Q 021300          153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVI  213 (314)
Q Consensus       153 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v  213 (314)
                      |++++++++                         +++.|+|++|++|+|+++.+|++.++.
T Consensus       157 p~~i~~~~~-------------------------~~i~g~g~~g~~aiq~a~~~g~~~iia  192 (194)
T d1f8fa1         157 TKDFPFDQL-------------------------VKFYAFDEINQAAIDSRKGITLKPIIK  192 (194)
T ss_dssp             CTTCCGGGG-------------------------EEEEEGGGHHHHHHHHHHTSCSEEEEE
T ss_pred             CCCCCcccE-------------------------EEEeCcHHHHHHHHHHHHHcCCCEEEE
Confidence            998876543                         445678999999999999999966554

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=5.3e-34  Score=234.52  Aligned_cols=174  Identities=22%  Similarity=0.307  Sum_probs=145.3

Q ss_pred             CcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCC
Q 021300            7 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS   86 (314)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   86 (314)
                      |+++||++++..++++  ++++++++|+|+++||||||.++|||++|+++++|.++..++|+++|||++|+|+++|++++
T Consensus         1 m~~k~kA~v~~~~~~p--l~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~~~P~vlGHE~~G~V~~vG~~v~   78 (184)
T d1vj0a1           1 MGLKAHAMVLEKFNQP--LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKR   78 (184)
T ss_dssp             CCEEEEEEEBCSTTSC--CEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEESSCCB
T ss_pred             CCceEEEEEEecCCCC--cEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCccccccccceeeeeeeeEEecccc
Confidence            3467888888876654  89999999999999999999999999999999999887778999999999999999999986


Q ss_pred             C-----CCCCCEEEecccccCCCCCccccCCCC-CCCCcccc-ccccccCCCCccCcccceEEeec-CCceEECCCCCCc
Q 021300           87 K-----FKVGDKVGVGCMVGSCRSCDSCAIDLE-NYCPKVIM-TYANKYHDGTITYGGYSDIMVAD-EHFVVRIPEGTPL  158 (314)
Q Consensus        87 ~-----~~~Gd~V~~~~~~~~c~~c~~c~~g~~-~~c~~~~~-~~~~~~~~~~~~~g~~~~~~~v~-~~~~~~~p~~~~~  158 (314)
                      +     +++||+|++.+.. +|++|.+|..|++ +.|+++.. ++.+.+.......|+|+||+.++ +.+++++|+++++
T Consensus        79 ~~~~~~~~~Gd~V~~~~~~-~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~~  157 (184)
T d1vj0a1          79 DLNGELLKPGDLIVWNRGI-TCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITH  157 (184)
T ss_dssp             CTTSCBCCTTCEEEECSEE-CCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTCCE
T ss_pred             ccccccccceeeeEecccc-ccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCCCH
Confidence            4     6799999876655 9999999999986 56887643 33344443445689999999995 5799999999987


Q ss_pred             ccccccchhhhhhhhhhHhcCCCCCCCEEEEE
Q 021300          159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVV  190 (314)
Q Consensus       159 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~  190 (314)
                      ++      ++.+|++++.... +++|++|||+
T Consensus       158 ~~------pl~~A~~a~~~~~-~~~G~~VlI~  182 (184)
T d1vj0a1         158 RL------PLKEANKALELME-SREALKVILY  182 (184)
T ss_dssp             EE------EGGGHHHHHHHHH-HTSCSCEEEE
T ss_pred             HH------HHHHHHHHHHHhC-CCcCCEEEEe
Confidence            64      2456788887665 7999999997

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=6.6e-34  Score=232.11  Aligned_cols=166  Identities=24%  Similarity=0.388  Sum_probs=146.3

Q ss_pred             cchhhhccCCCCccceeeeeecCC-CCCeEEEEEeeeccChhhhhhHhcCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 021300           12 NAFGWAAKDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWG---NTIYPIVPGHEIVGVVTEVGSKVSK   87 (314)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~a~~l~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~   87 (314)
                      |++++...++|  +++++++.|++ +++||||||.+++||++|++.+.|.+.   .+++|+++|||++|+|+++|+++++
T Consensus         1 kA~~~~~~g~p--l~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~   78 (171)
T d1h2ba1           1 KAARLHEYNKP--LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEG   78 (171)
T ss_dssp             CEEEESSTTSC--CEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCS
T ss_pred             CEEEEEeCCCC--CEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCc
Confidence            46677766655  89999999986 689999999999999999999888653   3478999999999999999999999


Q ss_pred             CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (314)
Q Consensus        88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~  167 (314)
                      +++||||++.+.. .|++|..|..|.+++|.+..+.       |....|+|+||+.++.++++++|++++++.++++.++
T Consensus        79 ~~~GdrV~~~~~~-~cg~~~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~  150 (171)
T d1h2ba1          79 LEKGDPVILHPAV-TDGTCLACRAGEDMHCENLEFP-------GLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDE  150 (171)
T ss_dssp             CCTTCEEEECSCB-CCSCSHHHHTTCGGGCTTCBCB-------TTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGG
T ss_pred             CCCCCEEEEcCcc-CCCCcccccccccccccccccc-------eeecccccceeeeehhhcceecCCCCCHHHHHHHHhH
Confidence            9999999877665 8999999999999999886543       4457899999999999999999999999988889999


Q ss_pred             hhhhhhhhHhcCCCCCCCEEEE
Q 021300          168 GITVYSPLRFYGLDKPGMHVGV  189 (314)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlI  189 (314)
                      +.|+|++++. ..+ .|++|||
T Consensus       151 ~~ta~~al~~-~~~-~G~~VlI  170 (171)
T d1h2ba1         151 INDVLERLEK-GEV-LGRAVLI  170 (171)
T ss_dssp             HHHHHHHHHT-TCC-SSEEEEE
T ss_pred             HHHHHHHHHh-cCC-CCCEEEe
Confidence            9999999976 446 8999998

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=100.00  E-value=1.6e-33  Score=236.11  Aligned_cols=178  Identities=21%  Similarity=0.269  Sum_probs=148.6

Q ss_pred             CcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCC
Q 021300            7 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS   86 (314)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   86 (314)
                      -+++||+.+++..++|  ++++++|+|+|+++||||||.++|||++|++++.|.++ ..+|.++|||++|+|+++|++++
T Consensus         5 ~~~~~KAaV~~~~g~p--l~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~v~GHE~~G~V~~vG~~V~   81 (202)
T d1e3ia1           5 KVIKCKAAIAWKTGSP--LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKK-ALFPVVLGHECAGIVESVGPGVT   81 (202)
T ss_dssp             SCEEEEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSC-CCSSBCCCCEEEEEEEEECTTCC
T ss_pred             CeEEEEEEEEccCCCC--CEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeecc-cccccccccccceEEeeecCCce
Confidence            4567788888775554  89999999999999999999999999999999988775 57899999999999999999999


Q ss_pred             CCCCCCEEEecccccCCCCCccccCCCCCCCCcccccccc------------------ccCCCCccCcccceEEeecCCc
Q 021300           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN------------------KYHDGTITYGGYSDIMVADEHF  148 (314)
Q Consensus        87 ~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~------------------~~~~~~~~~g~~~~~~~v~~~~  148 (314)
                      ++++||||++.+. ..|+.|.+|..|.+++|.+.......                  ...++....|+|+||+++++.+
T Consensus        82 ~~~~GdrV~~~~~-~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~  160 (202)
T d1e3ia1          82 NFKPGDKVIPFFA-PQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEAN  160 (202)
T ss_dssp             SCCTTCEEEECSS-CCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGG
T ss_pred             eccCCCEEEEEee-ccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhh
Confidence            9999999976655 59999999999999999875332110                  0011123358999999999999


Q ss_pred             eEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEc
Q 021300          149 VVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG  191 (314)
Q Consensus       149 ~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G  191 (314)
                      ++++|++++++.++++.+++.+++.++..   +|+|++|.|+.
T Consensus       161 l~~lP~~~~~~~~~~~~~~~~~~~~a~~~---~k~G~~V~vi~  200 (202)
T d1e3ia1         161 LARVDDEFDLDLLVTHALPFESINDAIDL---MKEGKSIRTIL  200 (202)
T ss_dssp             EEECCTTSCGGGGEEEEEEGGGHHHHHHH---HHTTCCSEEEE
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCEEEEEE
Confidence            99999999999888888888888888754   47899998863

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-33  Score=230.29  Aligned_cols=171  Identities=19%  Similarity=0.282  Sum_probs=144.2

Q ss_pred             cccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC---CCCCCCcccccccEEEEEeCCCCC
Q 021300           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG---NTIYPIVPGHEIVGVVTEVGSKVS   86 (314)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~   86 (314)
                      .|+++++..   |+++++++++.|+|+++||||||.++|||++|++.+.+...   ..++|+++|||++|+|+++|++++
T Consensus         7 ~~~a~V~~g---p~~l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~   83 (185)
T d1pl8a1           7 NNLSLVVHG---PGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVK   83 (185)
T ss_dssp             CCEEEEEEE---TTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCC
T ss_pred             CCEEEEEeC---CCeEEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEecccee
Confidence            456777664   45699999999999999999999999999999999876432   246789999999999999999999


Q ss_pred             CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccch
Q 021300           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC  166 (314)
Q Consensus        87 ~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~  166 (314)
                      +|++||||++.+.. +|++|.+|..|++++|.+..+..      ....+|+|+||++++.++++++|+++++++++.++ 
T Consensus        84 ~~~~GdrV~~~~~~-~cg~c~~c~~G~~~~c~~~~~~g------~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~p-  155 (185)
T d1pl8a1          84 HLKPGDRVAIEPGA-PRENDEFCKMGRYNLSPSIFFCA------TPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFP-  155 (185)
T ss_dssp             SCCTTCEEEECSEE-CSSCCHHHHTTCGGGCTTCEETT------BTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEEE-
T ss_pred             eecccccceeccee-ccccchhhccchhchhccceeee------cccccccceEEEEEchHHEEECCCCCCHHHHHHHH-
Confidence            99999999877766 89999999999999998875532      23467899999999999999999999999987654 


Q ss_pred             hhhhhhhhhHhcCCCCCCCEEEEEcCCh
Q 021300          167 AGITVYSPLRFYGLDKPGMHVGVVGLGG  194 (314)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~vlI~Gag~  194 (314)
                       +.+++++++... +++|++||| |+|+
T Consensus       156 -l~~a~~a~~~~~-~~~G~~VlI-g~GP  180 (185)
T d1pl8a1         156 -LEKALEAFETFK-KGLGLKIML-KCDP  180 (185)
T ss_dssp             -GGGHHHHHHHHH-TTCCSEEEE-ECCT
T ss_pred             -HHHHHHHHHHhC-CCCCCEEEE-EeCC
Confidence             456677776655 699999998 6654

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.98  E-value=1.7e-32  Score=223.92  Aligned_cols=169  Identities=30%  Similarity=0.529  Sum_probs=144.9

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCC-CCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW-GNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ||++++...+++  +++++++.|+|++|||||||+++|||++|++++.+.. ....+|.++|||++|+|+++|+++++++
T Consensus         1 MkA~v~~~~g~p--l~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~   78 (171)
T d1rjwa1           1 MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLK   78 (171)
T ss_dssp             CEEEEBSSTTSC--CEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEecCCCC--cEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCce
Confidence            889998876544  8999999999999999999999999999999887653 3457899999999999999999999999


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||||++.+....|+.|..|..+..++|.+....       |...+|+|+||+++++++++++|++++++.|+ +. .+.
T Consensus        79 vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l~-~~~  149 (171)
T d1rjwa1          79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA-------GYSVDGGYAEYCRAAADYVVKIPDNTIIEVQP-LE-KIN  149 (171)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGCEECCTTCCEEEEE-GG-GHH
T ss_pred             eeeEEeeccccccccccccccCCCcccccccccc-------ceeccCccccceEecHHHEEECCCCCCHHHHH-HH-HHH
Confidence            9999998888889999999999999999887543       34567999999999999999999999987654 43 345


Q ss_pred             hhhhhhHhcCCCCCCCEEEEEcC
Q 021300          170 TVYSPLRFYGLDKPGMHVGVVGL  192 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~Ga  192 (314)
                      ++++++.+ +.+ +|++|||+|-
T Consensus       150 ~~~~~~~~-~~~-~G~tVlViG~  170 (171)
T d1rjwa1         150 EVFDRMLK-GQI-NGRVVLTLED  170 (171)
T ss_dssp             HHHHHHHT-TCC-SSEEEEECCC
T ss_pred             HHHHHHHh-cCC-CCCEEEEeCC
Confidence            66666654 334 5999999983

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.98  E-value=1.1e-32  Score=225.88  Aligned_cols=163  Identities=40%  Similarity=0.737  Sum_probs=136.1

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      ||+++....+  ++|++++++.|+|++|||||||.++|||++|++.+.|.+....+|+++|||++|+|+++|++++++++
T Consensus         1 m~a~~~~~~~--~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~~~P~i~GhE~~G~V~~vG~~V~~~~v   78 (179)
T d1uufa1           1 IKAVGAYSAK--QPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAP   78 (179)
T ss_dssp             CEEEEBSSTT--SCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEccCC--CCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccccccccccccccccchhhccccccCCC
Confidence            6666666543  45999999999999999999999999999999999998887889999999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCcccccccccc-CCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY-HDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~-~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      ||+|.+.+...+|++|.+|+.|++|+|+++...+.+.. ..+....|+|+||+++++++++++|+.......   ...+.
T Consensus        79 GdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~~~~---a~~l~  155 (179)
T d1uufa1          79 GDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEMIR---ADQIN  155 (179)
T ss_dssp             TCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEEEEC---GGGHH
T ss_pred             CCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcChhH---hchhH
Confidence            99999999889999999999999999999866554433 223345799999999999999999966533222   23456


Q ss_pred             hhhhhhHhc
Q 021300          170 TVYSPLRFY  178 (314)
Q Consensus       170 ta~~~l~~~  178 (314)
                      ++++++.+.
T Consensus       156 ~a~~a~~~a  164 (179)
T d1uufa1         156 EAYERMLRG  164 (179)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHHh
Confidence            677777543

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.97  E-value=1.7e-34  Score=236.28  Aligned_cols=170  Identities=18%  Similarity=0.232  Sum_probs=137.5

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   90 (314)
                      ||++++...   ++++++++|.|+|+++||||||+++|||++|++.+.+.....++|+++|||++|+|+++|+++++|++
T Consensus         1 MKa~v~~~~---~~l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~~~P~i~GhE~~G~V~~vG~~v~~~~v   77 (177)
T d1jqba1           1 MKGFAMLGI---NKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKP   77 (177)
T ss_dssp             CEEEEEEET---TEEEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCCCSSEECCCCEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEEeC---CCeEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCCCCCccCcceeeEEeeecccccceecC
Confidence            788888764   34999999999999999999999999999999887765655688999999999999999999999999


Q ss_pred             CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecC--CceEECCCCCCcccccccchhh
Q 021300           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADE--HFVVRIPEGTPLDATAPLLCAG  168 (314)
Q Consensus        91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~--~~~~~~p~~~~~~~aa~~~~~~  168 (314)
                      ||||++.+.. +|++|.+|.+|.++.|.+.....    ..+...+|+|+||++++.  .+++++|+++++++++....  
T Consensus        78 GdrV~v~~~~-~cg~c~~C~~g~~~~c~~~~~~~----~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~~--  150 (177)
T d1jqba1          78 GDRVIVPCTT-PDWRSLEVQAGFQQHSNGMLAGW----KFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVY--  150 (177)
T ss_dssp             TCEEEECSCC-CCSSSHHHHTTCGGGTTSTTTTC----CBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEEE--
T ss_pred             CCcEEEeeee-ccccccchhhhhhcccccccccc----cccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHHH--
Confidence            9999876665 99999999999999998764322    123456799999999986  47999999999887753322  


Q ss_pred             hhhhhhhHhcCCCCCCCEEEEEcCChHHHHH
Q 021300          169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVA  199 (314)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a  199 (314)
                       +++..+        ++.++|+|+|++|+.+
T Consensus       151 -~~~~~~--------~~~vlv~g~gp~gl~a  172 (177)
T d1jqba1         151 -HGFDHI--------EEALLLMKDKPKDLIK  172 (177)
T ss_dssp             -ESGGGH--------HHHHHHHHHCCTTCSE
T ss_pred             -HHHHHh--------cCceEEECCCHHHhhe
Confidence             222222        3447778888777654

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.97  E-value=8.3e-35  Score=242.96  Aligned_cols=188  Identities=22%  Similarity=0.265  Sum_probs=153.8

Q ss_pred             ccchhhhccCCCCccceeeeeecCC-------CCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRAT-------GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGS   83 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~-------~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~   83 (314)
                      +|++++...   +++++++++.|++       .++||+|||.+++||++|++++.|.++ .++|+++|||++|+|+++|+
T Consensus         2 ~kA~v~~~~---~~le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~-~~~P~v~GHE~~G~Vv~vG~   77 (201)
T d1kola1           2 NRGVVYLGS---GKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGR   77 (201)
T ss_dssp             EEEEEEEET---TEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECT
T ss_pred             cEEEEEeCC---CceEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc-cccceeccceeeeeeecccc
Confidence            567777663   3499999999865       469999999999999999999998776 47899999999999999999


Q ss_pred             CCCCCCCCCEEEecccccCCCCCccccCCCCCCCCcccc-ccccc--cCCCCccCcccceEEeecC--CceEECCCCCCc
Q 021300           84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIM-TYANK--YHDGTITYGGYSDIMVADE--HFVVRIPEGTPL  158 (314)
Q Consensus        84 ~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~-~~~~~--~~~~~~~~g~~~~~~~v~~--~~~~~~p~~~~~  158 (314)
                      ++++|++||||++.+.. +|++|.+|.+|+++.|..... ...+.  +.......|+|+||+++|.  .+++++|++.+.
T Consensus        78 ~V~~~~vGdrV~v~~~~-~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~~~~  156 (201)
T d1kola1          78 DVENLQIGDLVSVPFNV-ACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKA  156 (201)
T ss_dssp             TCCSCCTTCEEECCSEE-CCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHH
T ss_pred             ccccccccceeEEeeee-eccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCCCCh
Confidence            99999999999876644 999999999999999977532 22222  2223456799999999975  379999998777


Q ss_pred             ccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC
Q 021300          159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV  208 (314)
Q Consensus       159 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~  208 (314)
                      .+++.+...+.++++++.... .+.+    ++|+|++|++++|+||++||
T Consensus       157 ~~~~~~~~~~~~~~~a~~~~~-~~~g----~~g~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         157 MEKINIAEVVGVQVISLDDAP-RGYG----EFDAGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             HHTCCHHHHHTEEEECGGGHH-HHHH----HHHHTCSCEEEECTTCSSCC
T ss_pred             HHHHHHHHHHHHHHHHHHhCC-CCCe----EEeeCHHHHHHHHHHHHcCC
Confidence            777778888888888886554 3444    35889999999999999886

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.97  E-value=2.8e-32  Score=227.32  Aligned_cols=178  Identities=22%  Similarity=0.279  Sum_probs=142.6

Q ss_pred             CCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCC
Q 021300            6 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKV   85 (314)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   85 (314)
                      -...+||+.+++..+++  +++++++.|+|+++||||||.++|||++|++++.|.++ .++|.++|||++|+|+++|+++
T Consensus         4 ~~~~~~KAav~~~~g~~--l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~-~~~P~i~GHE~~G~Vv~~G~~v   80 (198)
T d1p0fa1           4 GKDITCKAAVAWEPHKP--LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGAGV   80 (198)
T ss_dssp             TSCEEEEEEEBSSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEECTTC
T ss_pred             CCceEEEEEEEccCCCC--CEEEEEECCCCCCCEEEEEEEEEEEecccceeeeeccc-cccccccceeeeeeeeecCccc
Confidence            34568999888765544  99999999999999999999999999999999998876 4789999999999999999999


Q ss_pred             CCCCCCCEEEecccccCCCCCccccCCCCCCCCcccccccc-ccCC-------------CCccCcccceEEeecCCceEE
Q 021300           86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHD-------------GTITYGGYSDIMVADEHFVVR  151 (314)
Q Consensus        86 ~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~-~~~~-------------~~~~~g~~~~~~~v~~~~~~~  151 (314)
                      +++++||||++.+. .+|++|.+|.+|.+++|++....... ....             .....|+|+||+.+++..+++
T Consensus        81 ~~~~~GdrV~~~~~-~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~k  159 (198)
T d1p0fa1          81 TCVKPGDKVIPLFV-PQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAK  159 (198)
T ss_dssp             CSCCTTCEEEECSS-CCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEE
T ss_pred             ccCcCCCEEEEEee-ccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEE
Confidence            99999999987655 49999999999999999876442211 1111             112258999999999999999


Q ss_pred             CCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHH
Q 021300          152 IPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGH  197 (314)
Q Consensus       152 ~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~  197 (314)
                      +|+.++.+.++...+.+.+          ++++++|||.|+|++|+
T Consensus       160 ip~~~~~~~~~~~~~~~~~----------v~~~~~vlv~G~G~iGl  195 (198)
T d1p0fa1         160 IDPKINVNFLVSTKLTLDQ----------INKAFELLSSGQGVRSI  195 (198)
T ss_dssp             ECTTSCGGGGEEEEECGGG----------HHHHHHHTTTSSCSEEE
T ss_pred             CCCCCCHHHHHHhhcchhh----------cCCCCEEEEECCCcceE
Confidence            9999987766544333222          34555678888888775

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.97  E-value=2.3e-31  Score=222.19  Aligned_cols=180  Identities=22%  Similarity=0.297  Sum_probs=144.0

Q ss_pred             CCCCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCC
Q 021300            4 APEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGS   83 (314)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~   83 (314)
                      |+.-..+||+.+++..++  ++++++++.|+|+++||||||.++|||++|++++.|.++ ..+|.++|||++|+|+++|+
T Consensus         2 ~~~~~~k~KAavl~~~~~--~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~-~~~P~i~GHE~~G~Vv~vG~   78 (198)
T d2jhfa1           2 TAGKVIKCKAAVLWEEKK--PFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV-TPLPVIAGHEAAGIVESIGE   78 (198)
T ss_dssp             CTTSCEEEEEEEBCSTTS--CCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC-CCSSBCCCCSEEEEEEEECT
T ss_pred             CCCCceEEEEEEEecCCC--CCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCcc-cccceecccceeEEEEecCc
Confidence            445566788888876544  499999999999999999999999999999999999876 47899999999999999999


Q ss_pred             CCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccC--------------CCCccCcccceEEeecCCce
Q 021300           84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYH--------------DGTITYGGYSDIMVADEHFV  149 (314)
Q Consensus        84 ~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~--------------~~~~~~g~~~~~~~v~~~~~  149 (314)
                      +++++++||||++.+.. +|+.|..|..|..++|......+.....              +.....|+|+||+++++.++
T Consensus        79 ~v~~~~vGdrV~v~~~~-~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~  157 (198)
T d2jhfa1          79 GVTTVRPGDKVIPLFTP-QCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISV  157 (198)
T ss_dssp             TCCSCCTTCEEEECSSC-CCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGE
T ss_pred             cccCcCCCCEEEEeeee-cccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHe
Confidence            99999999999776655 9999999999999999987553321111              11223489999999999999


Q ss_pred             EECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEE
Q 021300          150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV  190 (314)
Q Consensus       150 ~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~  190 (314)
                      +++|++++++.++....++.+...+.   ..+++|++|+|+
T Consensus       158 ~~~p~~~~~e~l~~~~~~~~~v~~g~---~~l~~G~~VaVi  195 (198)
T d2jhfa1         158 AKIDAAFALDPLITHVLPFEKINEGF---DLLRSGESIRTI  195 (198)
T ss_dssp             EECCTTSCCGGGEEEEEEGGGHHHHH---HHHHTTCCSEEE
T ss_pred             EECCCCCCHHHHHHHHHHHHhhhhCC---ceeeCCCEEEEE
Confidence            99999998877665444433332222   125789999886

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.97  E-value=1.4e-31  Score=219.64  Aligned_cols=167  Identities=25%  Similarity=0.367  Sum_probs=139.3

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC--------CCCCCCcccccccEEEEEeC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG--------NTIYPIVPGHEIVGVVTEVG   82 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~--------~~~~p~~~G~e~~G~V~~vG   82 (314)
                      ||++++..+++|  +++++++.|+|++|||||||.++|||++|+++++|.++        ..++|+++|||++|+|+++|
T Consensus         1 MKA~~~~~~G~p--l~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g   78 (177)
T d1jvba1           1 MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVG   78 (177)
T ss_dssp             CEEEEECSTTSC--CEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEEC
T ss_pred             CeEEEEEeCCCC--CEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeec
Confidence            899999987765  88999999999999999999999999999999988643        24789999999999999999


Q ss_pred             CCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCc-eEECCCCCCcccc
Q 021300           83 SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF-VVRIPEGTPLDAT  161 (314)
Q Consensus        83 ~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~p~~~~~~~a  161 (314)
                      +++++|++||||++.+.. .|+.|.+|.+|++++|++..+.       |....|+|+||+.++..+ ++++|+..+.+.+
T Consensus        79 ~~v~~~~~GdrV~~~~~~-~c~~c~~~~~g~~~~c~~~~~~-------g~~~~G~~aey~~vp~~~~~~~~~~~~~~~~a  150 (177)
T d1jvba1          79 DEVVGYSKGDLVAVNPWQ-GEGNCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYMYKLRRVKPMITK  150 (177)
T ss_dssp             TTCCSCCTTCEEEECCEE-CCSSSHHHHTTCGGGCSSCEEB-------TTTBCCSSBSEEEESCGGGEEECSSSCCCCEE
T ss_pred             cCccccccCceEeeeecc-ccccccccccccccccCCccee-------eeccccccccEEEEEhHHeEEECCCCChHHHH
Confidence            999999999999876654 8999999999999999987543       345679999999997655 5566655544444


Q ss_pred             cccchhhhhhhhhhHhcCCCCCCCEEEE
Q 021300          162 APLLCAGITVYSPLRFYGLDKPGMHVGV  189 (314)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~vlI  189 (314)
                      +.+..++.++++++.... + .|++|||
T Consensus       151 ~~~~~~~~~a~~~~~~~~-~-~G~~VlI  176 (177)
T d1jvba1         151 TMKLEEANEAIDNLENFK-A-IGRQVLI  176 (177)
T ss_dssp             EEEGGGHHHHHHHHHTTC-C-CSEEEEE
T ss_pred             HHHHHHHHHHHHHHHhhc-c-cCCceEC
Confidence            444568889999997666 3 5899987

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.1e-30  Score=205.57  Aligned_cols=148  Identities=21%  Similarity=0.314  Sum_probs=134.1

Q ss_pred             ccccchhhhccCCCCcccee-eeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCC
Q 021300            9 HPKNAFGWAAKDTSGVLSPF-HFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVS   86 (314)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~   86 (314)
                      +.||++++..+++|+.++++ +++.|+|++|||||||.+++||++|++.+.|.+.. ..+|.++|||++|+|+++|++++
T Consensus         1 ~~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~   80 (150)
T d1yb5a1           1 KLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNAS   80 (150)
T ss_dssp             CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCT
T ss_pred             CceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceee
Confidence            35999999998888888875 68999999999999999999999999999987764 47889999999999999999999


Q ss_pred             CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccch
Q 021300           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC  166 (314)
Q Consensus        87 ~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~  166 (314)
                      +|++||||+...                                  ...|+|+||+++++++++++|+++++++|+++++
T Consensus        81 ~~~vGdrV~~~~----------------------------------~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~  126 (150)
T d1yb5a1          81 AFKKGDRVFTSS----------------------------------TISGGYAEYALAADHTVYKLPEKLKPVIGSQYPL  126 (150)
T ss_dssp             TCCTTCEEEESC----------------------------------CSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEG
T ss_pred             ccccCccccccc----------------------------------cccccccccccccccccccccCCCCHHHHHHhhh
Confidence            999999997522                                  3569999999999999999999999999999999


Q ss_pred             hhhhhhhhhHhcCCCCCCCEEEEE
Q 021300          167 AGITVYSPLRFYGLDKPGMHVGVV  190 (314)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~vlI~  190 (314)
                      ...|+|+++...+..+.|+++||+
T Consensus       127 ~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1         127 EKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             GGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             hhhhehhhheEEcCcccCCEEEEC
Confidence            999999998878888999999984

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=1.2e-28  Score=195.72  Aligned_cols=143  Identities=18%  Similarity=0.233  Sum_probs=125.8

Q ss_pred             cchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCC
Q 021300           12 NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVG   91 (314)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   91 (314)
                      +.++|..+++|+.|++++.+.|+|++|||||||++++||++|++++.|.++...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vG   81 (147)
T d1qora1           2 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAG   81 (147)
T ss_dssp             EEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             eEEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCCCcceeeeccccccceeeeeeeccccccc
Confidence            34667788888889999999999999999999999999999999999998878899999999999999999999999999


Q ss_pred             CEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCccccc--ccchhhh
Q 021300           92 DKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATA--PLLCAGI  169 (314)
Q Consensus        92 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa--~~~~~~~  169 (314)
                      |||+..                                  ....|+|+||+.++.+.++++|+++++++++  +++....
T Consensus        82 drV~~~----------------------------------~~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~  127 (147)
T d1qora1          82 DRVVYA----------------------------------QSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDA  127 (147)
T ss_dssp             CEEEES----------------------------------CCSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGH
T ss_pred             ceeeee----------------------------------ccccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHH
Confidence            999631                                  1346899999999999999999999887654  5677777


Q ss_pred             hhhhhhHhcCCCCCCCEEEE
Q 021300          170 TVYSPLRFYGLDKPGMHVGV  189 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI  189 (314)
                      ++++++.+. ++++|++|||
T Consensus       128 ~~~~~l~~~-~~~~G~~VLI  146 (147)
T d1qora1         128 QRAHEILES-RATQGSSLLI  146 (147)
T ss_dssp             HHHHHHHHT-TCCCBCCEEE
T ss_pred             HHHHHHHHh-CCCCCCEEEe
Confidence            888887654 4799999998

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.94  E-value=1.6e-27  Score=190.21  Aligned_cols=149  Identities=23%  Similarity=0.260  Sum_probs=127.6

Q ss_pred             cccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCC
Q 021300           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKF   88 (314)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~   88 (314)
                      +||++++...+++..+++++++.|+|++|||||||+++|||++|++.+.|.++. ...|+++|+|++|+|++  .+++.|
T Consensus         3 ~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~~~   80 (152)
T d1xa0a1           3 AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHPRF   80 (152)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSSSC
T ss_pred             ceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCCcc
Confidence            599999999888777788999999999999999999999999999988887663 46899999999999999  667789


Q ss_pred             CCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhh
Q 021300           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG  168 (314)
Q Consensus        89 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~  168 (314)
                      ++||+|.....                             ..+....|+|+||+.+++++++++|++++. +|++++++.
T Consensus        81 ~~g~~v~~~~~-----------------------------~~~~~~~G~~aEy~~v~~~~~~~iP~~l~~-~aa~l~~a~  130 (152)
T d1xa0a1          81 REGDEVIATGY-----------------------------EIGVTHFGGYSEYARLHGEWLVPLPKGLER-IAQEISLAE  130 (152)
T ss_dssp             CTTCEEEEEST-----------------------------TBTTTBCCSSBSEEEECGGGCEECCTTHHH-HEEEEEGGG
T ss_pred             ccCCEEEEecC-----------------------------ccccccCCCcceeeeehhhccccCCCCCCH-HHHHHHHHH
Confidence            99999963211                             112345799999999999999999999985 678899999


Q ss_pred             hhhhhhhHhcCCCCCCCEEEEEc
Q 021300          169 ITVYSPLRFYGLDKPGMHVGVVG  191 (314)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlI~G  191 (314)
                      .|++.++...++++ |++|||+|
T Consensus       131 ~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1         131 LPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             HHHHHHHHHHTCCC-SEEEEECC
T ss_pred             HHHHHHHHHhcCCC-CCEEEEcC
Confidence            99998887777765 99999975

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=8.6e-27  Score=180.74  Aligned_cols=130  Identities=21%  Similarity=0.315  Sum_probs=116.2

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ||++++...+++  +++++++.|+|+++||||||+++|||++|++.+.|.+.. ..+|+++|||++|+|           
T Consensus         1 MkA~~~~~~G~~--l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V-----------   67 (131)
T d1iz0a1           1 MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV-----------   67 (131)
T ss_dssp             CEEEEECSTTSC--EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-----------
T ss_pred             CcEEEEccCCCC--CEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-----------
Confidence            889999887654  889999999999999999999999999999999998764 478999999999999           


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||+|+..                                   ...|+|+||+.+++++++++|+++++++||.+++.+.
T Consensus        68 vGd~V~~~-----------------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~  112 (131)
T d1iz0a1          68 EGRRYAAL-----------------------------------VPQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAE  112 (131)
T ss_dssp             TTEEEEEE-----------------------------------CSSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHH
T ss_pred             ccceEEEE-----------------------------------eccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHH
Confidence            39999732                                   3569999999999999999999999999999999999


Q ss_pred             hhhhhhHhcCCCCCCCEEEEE
Q 021300          170 TVYSPLRFYGLDKPGMHVGVV  190 (314)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlI~  190 (314)
                      |||+++.+.+  +.|++||++
T Consensus       113 Ta~~al~~~g--~~g~tvl~l  131 (131)
T d1iz0a1         113 AAFRALLDRG--HTGKVVVRL  131 (131)
T ss_dssp             HHHHHTTCTT--CCBEEEEEC
T ss_pred             HHHHHHHhcc--cCCCEEEEC
Confidence            9999998766  669999874

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=2.3e-25  Score=175.98  Aligned_cols=135  Identities=18%  Similarity=0.238  Sum_probs=114.9

Q ss_pred             ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   89 (314)
                      ||++++...+++..+++++++.|+|++|||||||.|+|||+.|.+.+.|.++. ..+|+++|+|++|+|+++|.  ..++
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~--~~~~   78 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSED--PRFH   78 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECS--TTCC
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeecc--CCcc
Confidence            89999999888888899999999999999999999999999999999987664 47899999999999999766  4699


Q ss_pred             CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (314)
Q Consensus        90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  169 (314)
                      +||+|.+...                             ..+....|+|+||+.+++++++++|+++|+++||+++++..
T Consensus        79 ~g~~v~~~~~-----------------------------~~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~  129 (146)
T d1o89a1          79 AGQEVLLTGW-----------------------------GVGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNF  129 (146)
T ss_dssp             TTCEEEEECT-----------------------------TBTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHH
T ss_pred             ceeeEEeecc-----------------------------cceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHH
Confidence            9999975321                             11345679999999999999999999999999999999888


Q ss_pred             hhhhhhH
Q 021300          170 TVYSPLR  176 (314)
Q Consensus       170 ta~~~l~  176 (314)
                      ||+..+.
T Consensus       130 tA~~~~~  136 (146)
T d1o89a1         130 AEAIINN  136 (146)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHHH
Confidence            8865553

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.91  E-value=1.1e-26  Score=187.26  Aligned_cols=152  Identities=18%  Similarity=0.101  Sum_probs=129.6

Q ss_pred             ccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCC
Q 021300            9 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSK   87 (314)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~   87 (314)
                      +.||++.+...+.+..+++++++.|++++|||||||+|+|||++|++.+.|.++. ...|.++|+|++|+|++  +.+++
T Consensus         2 ~~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~   79 (162)
T d1tt7a1           2 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPR   79 (162)
T ss_dssp             CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTT
T ss_pred             CcEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--ccccc
Confidence            5699999999888888999999999999999999999999999999988887764 36678999999999998  56778


Q ss_pred             CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (314)
Q Consensus        88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~  167 (314)
                      +++||+|.....                             ..+....|+|+||+.+++++++++|+++++++||.++..
T Consensus        80 ~~~g~~v~~~~~-----------------------------~~g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~  130 (162)
T d1tt7a1          80 FAEGDEVIATSY-----------------------------ELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLL  130 (162)
T ss_dssp             CCTTCEEEEEST-----------------------------TBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCST
T ss_pred             cccceeeEeeec-----------------------------cceeccccccceEEEecHHHEEECCCCCCHHHHHHHHHH
Confidence            999999974321                             113456899999999999999999999999999999999


Q ss_pred             hhhhhhhhHhcCCCCCCCEEEEEcC
Q 021300          168 GITVYSPLRFYGLDKPGMHVGVVGL  192 (314)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlI~Ga  192 (314)
                      ..|+|.++.... ...+++|||.|+
T Consensus       131 ~~ta~~~~~~~~-~~~~~~Vli~ga  154 (162)
T d1tt7a1         131 TIVDREVSLEET-PGALKDILQNRI  154 (162)
T ss_dssp             TSEEEEECSTTH-HHHHHHTTTTCC
T ss_pred             HHHHHHHHHhcC-CCCCCEEEEECC
Confidence            999998875432 455677777765

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.9e-24  Score=173.75  Aligned_cols=143  Identities=23%  Similarity=0.304  Sum_probs=125.4

Q ss_pred             CCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEec
Q 021300          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV  234 (314)
Q Consensus       156 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~  234 (314)
                      +|+++||++++++.|||+++.+..++++|++|||+|+ |++|++++|+++.+|++++++++++++. ++++++|++.++|
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~-~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ-KIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCccccccccccccc-ccccccCcccccc
Confidence            5899999999999999999988888999999999997 9999999999999999999999987665 6668999999999


Q ss_pred             CCCHHHHH---HHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300          235 SRDQDEMQ---AAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       235 ~~~~~~~~---~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~  301 (314)
                      +++.+...   +.++  ++|++||++|+. .+..++++++++|+++.+|.. ++.+++...++.|++++.+.
T Consensus        80 ~~~~~~~~~i~~~t~~~g~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~-~~~~~~~~~~~~k~~~i~g~  149 (174)
T d1yb5a2          80 HREVNYIDKIKKYVGEKGIDIIIEMLANV-NLSKDLSLLSHGGRVIVVGSR-GTIEINPRDTMAKESSIIGV  149 (174)
T ss_dssp             TTSTTHHHHHHHHHCTTCEEEEEESCHHH-HHHHHHHHEEEEEEEEECCCC-SCEEECTHHHHTTTCEEEEC
T ss_pred             cccccHHHHhhhhhccCCceEEeecccHH-HHHHHHhccCCCCEEEEEecC-CCCCCCHHHHHHCCCEEEEE
Confidence            98875444   3433  699999999976 599999999999999999974 46788889999999999843

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.90  E-value=2.2e-24  Score=174.50  Aligned_cols=144  Identities=33%  Similarity=0.591  Sum_probs=127.8

Q ss_pred             CCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecC
Q 021300          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS  235 (314)
Q Consensus       156 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~  235 (314)
                      ++++++|+++|++.|||+++++.. +++|++|+|+|+|++|++++|++|.+|++|++++++++++ ++++++|++.++++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al~~~~-~~~g~~VlV~GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~-~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGLKQTN-ARPGQWVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKL-ELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHT-CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhC-CCCCCEEEEeeccccHHHHHHHHHHcCCccceecchhhHH-HhhhccCccccccc
Confidence            578999999999999999998765 8999999999999999999999999999999999988777 55689999999998


Q ss_pred             CCHHHH---HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300          236 RDQDEM---QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       236 ~~~~~~---~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~  301 (314)
                      .+.+..   .+...+++.+++++++...+..++++++++|+++.+|.+.++.+++...++.|++++.++
T Consensus        79 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs  147 (166)
T d1llua2          79 RQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGS  147 (166)
T ss_dssp             TTSCHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEEC
T ss_pred             cchhHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCCCccCCHHHHHhCCcEEEEE
Confidence            776443   344567888888888888899999999999999999998888999999999999999853

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.90  E-value=2.3e-26  Score=187.91  Aligned_cols=157  Identities=19%  Similarity=0.216  Sum_probs=128.7

Q ss_pred             ccccchhhhccCCCC-c--cceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC----------CCCCCccccccc
Q 021300            9 HPKNAFGWAAKDTSG-V--LSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN----------TIYPIVPGHEIV   75 (314)
Q Consensus         9 ~~~~~~~~~~~~~~~-~--~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~----------~~~p~~~G~e~~   75 (314)
                      .+||++.+..+++|. .  ++..++|.|+|+++||||||++++||++|++.+.|..+.          ...|.++|+|++
T Consensus         2 ~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~   81 (175)
T d1gu7a1           2 ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGL   81 (175)
T ss_dssp             EEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCE
T ss_pred             ceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccc
Confidence            369999999887763 2  344577778889999999999999999999999886432          155778999999


Q ss_pred             EEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCC
Q 021300           76 GVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG  155 (314)
Q Consensus        76 G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~  155 (314)
                      |+|++.|.++..++.||+|....                                  ...|+|+||+++++++++++|++
T Consensus        82 g~V~~~~~~~~~~~~g~~v~~~~----------------------------------~~~g~~aey~~v~~~~~~~iP~~  127 (175)
T d1gu7a1          82 FEVIKVGSNVSSLEAGDWVIPSH----------------------------------VNFGTWRTHALGNDDDFIKLPNP  127 (175)
T ss_dssp             EEEEEECTTCCSCCTTCEEEESS----------------------------------SCCCCSBSEEEEEGGGEEEECCH
T ss_pred             cccccccccccccccccceeccc----------------------------------cccccccceeeehhhhccCCCcc
Confidence            99999999999999999997422                                  35688999999999999999998


Q ss_pred             CCcccccccchhhhhhhhhhHh-cCCCCCCCEEEEEc-C-ChHHHHHHH
Q 021300          156 TPLDATAPLLCAGITVYSPLRF-YGLDKPGMHVGVVG-L-GGLGHVAVK  201 (314)
Q Consensus       156 ~~~~~aa~~~~~~~ta~~~l~~-~~~~~~g~~vlI~G-a-g~vG~~a~~  201 (314)
                      ++.+.+  +++...|||+++.. ...+++|++|||.| + |++|++++|
T Consensus       128 ~~~~~a--~~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         128 AQSKAN--GKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             HHHHHT--TCSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred             chhhhh--ccchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEe
Confidence            865554  34567889988764 45689999999987 4 779988776

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=5.4e-24  Score=172.97  Aligned_cols=141  Identities=27%  Similarity=0.369  Sum_probs=118.5

Q ss_pred             CCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEec
Q 021300          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV  234 (314)
Q Consensus       156 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~  234 (314)
                      +|+++||++++++.|||+++++ .++++|++|||+|+ |++|++++|+||..|++|++++++++++ +.++++|++.++|
T Consensus         1 ls~eeAA~l~~~~~TA~~al~~-~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~-~~~~~lGa~~~i~   78 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKL-ALPLALGAEEAAT   78 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHHH-TTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGS-HHHHHTTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEeccccchhhhhhhhccccccccccccccccc-ccccccccceeee
Confidence            5789999999999999999987 55899999999997 9999999999999999999999988776 5557899999999


Q ss_pred             CCCHHHHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEee
Q 021300          235 SRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       235 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~~  300 (314)
                      +.+........+++|++||++|.  .+..++++++++|+++.+|...+ +.+++...++.|++++.+
T Consensus        79 ~~~~~~~~~~~~g~D~v~d~~G~--~~~~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g  143 (171)
T d1iz0a2          79 YAEVPERAKAWGGLDLVLEVRGK--EVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLG  143 (171)
T ss_dssp             GGGHHHHHHHTTSEEEEEECSCT--THHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEE
T ss_pred             hhhhhhhhhccccccccccccch--hHHHHHHHHhcCCcEEEEeCCCCCCCCccHHHHHHCCcEEEE
Confidence            87654333344589999999884  48999999999999999998764 568999999999999983

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.89  E-value=2.3e-23  Score=169.68  Aligned_cols=145  Identities=21%  Similarity=0.256  Sum_probs=124.6

Q ss_pred             CCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecC
Q 021300          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS  235 (314)
Q Consensus       156 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~  235 (314)
                      ++++.+++++|++.|||+++.+..++++|++|+|+|+|++|++++|+++.+|++++++++..+.+.++++++|++.++++
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~   80 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS   80 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence            45788999999999999998888889999999999999999999999999999776665544455577789999999998


Q ss_pred             CCHHH---HHHHcC-CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC--CCcccchhhhhcCceeEee
Q 021300          236 RDQDE---MQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE--KPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       236 ~~~~~---~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~--~~~~~~~~~~~~~~~~i~~  300 (314)
                      ++++.   ++++++ ++|++|||+|+...+..++++++++|+++++|.+.  .+.+++..+++.+++++.+
T Consensus        81 ~~~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~G  151 (174)
T d1f8fa2          81 KTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILG  151 (174)
T ss_dssp             TTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEE
T ss_pred             CCcCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCEEEE
Confidence            87644   444544 79999999999888999999999999999999764  4578999999999999984

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=1.3e-23  Score=170.33  Aligned_cols=144  Identities=47%  Similarity=0.726  Sum_probs=123.0

Q ss_pred             CCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecC
Q 021300          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS  235 (314)
Q Consensus       156 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~  235 (314)
                      .+++.+|+++|+..|+|+++++. ++++|++|+|+|+|++|++++|++|.+|+++++++++++++ ++++++|++.++++
T Consensus         4 ~~~a~~Apl~Cag~Tay~al~~~-~~~~G~~VlI~GaG~vG~~a~qlak~~Ga~~i~~~~~~~~~-~~a~~lGad~~i~~   81 (168)
T d1uufa2           4 EQLAAVAPLLCAGITTYSPLRHW-QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEVVNS   81 (168)
T ss_dssp             GGHHHHGGGGTHHHHHHHHHHHT-TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHTCSEEEET
T ss_pred             ccHHHHHHHHhHHHHHHHHHHHh-CCCCCCEEEEeccchHHHHHHHHhhcccccchhhccchhHH-HHHhccCCcEEEEC
Confidence            34567788999999999999764 58999999999999999999999999999999988888776 56689999999999


Q ss_pred             CCHHHHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEeee
Q 021300          236 RDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       236 ~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~~~  301 (314)
                      .+.+......+++|++||++|...++..++++++++|+++.+|.+.+ ...++...++.+++++.++
T Consensus        82 ~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs  148 (168)
T d1uufa2          82 RNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGS  148 (168)
T ss_dssp             TCHHHHHTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEEC
T ss_pred             chhhHHHHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEEE
Confidence            99887766677899999999998889999999999999999998765 4577888888999999843

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=3.3e-24  Score=173.78  Aligned_cols=142  Identities=35%  Similarity=0.530  Sum_probs=124.1

Q ss_pred             CcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCC
Q 021300          157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR  236 (314)
Q Consensus       157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~  236 (314)
                      +.+.||++.|+..|+|+++++.. +++|++|+|+|+|++|++++|++|.+|++|++++++++++ +.++++|++.++++.
T Consensus         2 p~e~AApl~cag~Ta~~al~~~~-~~~g~~vlI~GaG~vG~~a~q~ak~~G~~vi~~~~~~~k~-~~a~~lGa~~~i~~~   79 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPLVRNG-CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKR-EDAMKMGADHYIATL   79 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHHTT-CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTH-HHHHHHTCSEEEEGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhC-cCCCCEEEEECCCCcchhHHHHhhhccccccccccchhHH-HHhhccCCcEEeecc
Confidence            45668899999999999998755 8999999999999999999999999999999999988877 555899999998875


Q ss_pred             C-HHHHHHHcCCccEEEEccCCcc--cHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          237 D-QDEMQAAMGTMDGIIDTVSAVH--PLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       237 ~-~~~~~~~~~~~d~v~d~~g~~~--~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                      + .++.++..+++|.++|++++..  .+..++++++++|+++.+|.++++.+++...+++|++++.+
T Consensus        80 ~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~G  146 (168)
T d1piwa2          80 EEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISY  146 (168)
T ss_dssp             GTSCHHHHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCEEEE
T ss_pred             chHHHHHhhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccccccccHHHHHhCCcEEEE
Confidence            4 4566667779999999987643  46789999999999999999888889999999999999984

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.88  E-value=4.7e-23  Score=167.43  Aligned_cols=144  Identities=18%  Similarity=0.229  Sum_probs=121.4

Q ss_pred             CCcccccccchhhhhhhhhhH---hcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE
Q 021300          156 TPLDATAPLLCAGITVYSPLR---FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS  231 (314)
Q Consensus       156 ~~~~~aa~~~~~~~ta~~~l~---~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~  231 (314)
                      +|++|||++++++.|||++++   ..+..++|++|||+|+ |++|.+++|++|.+|++|+.+++++++. +.++++|++.
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~-~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH-DYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH-HHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHH-HHHHhcccce
Confidence            589999999999999997654   5677889999999986 9999999999999999999999998887 5557899999


Q ss_pred             EecCCCHH--HHHHHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEeee
Q 021300          232 FLVSRDQD--EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       232 ~v~~~~~~--~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~~~  301 (314)
                      ++++++..  ...... +++|+|||++|... +..++++|+++|+++.+|...+ ..++++..+++|++++.+.
T Consensus        80 vi~~~~~~~~~~~~~~~~gvD~vid~vgg~~-~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv  152 (176)
T d1xa0a2          80 VLAREDVMAERIRPLDKQRWAAAVDPVGGRT-LATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGI  152 (176)
T ss_dssp             EEECC---------CCSCCEEEEEECSTTTT-HHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEEC
T ss_pred             eeecchhHHHHHHHhhccCcCEEEEcCCchh-HHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcEEEEE
Confidence            99887642  222222 37999999999885 9999999999999999998764 5799999999999999864

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.88  E-value=6.4e-23  Score=166.82  Aligned_cols=141  Identities=21%  Similarity=0.282  Sum_probs=116.6

Q ss_pred             CcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEE-EEeCChhhHHHHHHHcCCcEEecC
Q 021300          157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVT-VISTSPSKKSEAIERLGADSFLVS  235 (314)
Q Consensus       157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi-~v~~~~~~~~~~~~~~ga~~~v~~  235 (314)
                      +.++||.++|++.|+|+++.+.+.+++|++|+|+|+|++|++++|+++.+|++.+ +++.+++ +.++++++|++.++++
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~-r~~~a~~~Ga~~~i~~   80 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGE-KFPKAKALGATDCLNP   80 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGG-GHHHHHHTTCSEEECG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchH-HHHHHHHhCCCcccCC
Confidence            3578899999999999998777889999999999999999999999999999554 5555554 4588899999999876


Q ss_pred             CCH----HH-HHHHc-CCccEEEEccCCcccHHHHHHhhccC-CEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300          236 RDQ----DE-MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEKPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       236 ~~~----~~-~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~i~  299 (314)
                      ...    .. .++.. +++|++|||+|++.++..++++++++ |+++.+|.+.++..++...++. +++|.
T Consensus        81 ~~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~~i~~~~~~~-~k~i~  150 (174)
T d1e3ia2          81 RELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVIL-GRSIN  150 (174)
T ss_dssp             GGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHT-TCEEE
T ss_pred             ccchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCccccchHHHhc-cCEEE
Confidence            432    22 22222 48999999999998899999999996 9999999988888999887765 45676

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.87  E-value=1.2e-21  Score=158.76  Aligned_cols=143  Identities=25%  Similarity=0.246  Sum_probs=120.7

Q ss_pred             CCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecC
Q 021300          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS  235 (314)
Q Consensus       156 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~  235 (314)
                      +|+|+||. ..++.+||+++++.. +++|++|+|+|+|++|++++|+++.+|++|++++++++++ ++++++|++..++.
T Consensus         1 VS~e~Aal-~ePla~a~~a~~~~~-~~~g~~vlV~G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~-~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGAL-LEPLSVGVHACRRAG-VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRL-EVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHHT-HHHHHHHHHHHHHHT-CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHTTCSEEEEC
T ss_pred             CCHHHHHH-HHHHHHHHHHHHHhC-CCCCCEEEEEcccccchhhHhhHhhhcccccccchHHHHH-HHHHHcCCcEEEec
Confidence            47888874 457889999998776 8999999999999999999999999999999999998877 56688999876654


Q ss_pred             CC----H-HHHHHH---c-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300          236 RD----Q-DEMQAA---M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       236 ~~----~-~~~~~~---~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~  301 (314)
                      +.    . +...++   . .++|++||++|+..++..++++++++|+++.+|.+.++.+++...++.|++++.++
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~gs  152 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSV  152 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEEC
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCCCCCcCHHHHHHCCCEEEEE
Confidence            32    1 222222   2 37999999999988899999999999999999998888899999999999999853

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=6.7e-22  Score=160.48  Aligned_cols=143  Identities=24%  Similarity=0.233  Sum_probs=122.0

Q ss_pred             CCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEec
Q 021300          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLV  234 (314)
Q Consensus       156 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~  234 (314)
                      +|+++|| +..++.+||+++++.. +++|++|+|+|+|++|++++|+++.+|+ +|++++++++++ ++++++|++.+++
T Consensus         1 vS~e~Aa-l~epla~a~~a~~~~~-~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl-~~a~~~Ga~~~~~   77 (171)
T d1pl8a2           1 VTFEEGA-LIEPLSVGIHACRRGG-VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRL-SKAKEIGADLVLQ   77 (171)
T ss_dssp             SCHHHHH-HHHHHHHHHHHHHHHT-CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHTTCSEEEE
T ss_pred             CCHHHHH-HHHHHHHHHHHHHHhC-CCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHH-HHHHHhCCccccc
Confidence            4788877 4467889999998766 8999999999999999999999999999 688888887776 5668999999888


Q ss_pred             CCCHH---HHHHHc----CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300          235 SRDQD---EMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       235 ~~~~~---~~~~~~----~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~  301 (314)
                      +.+.+   ..+.+.    .++|++||++|+...++.++++++++|+++++|.++.+.++|..+++.|++++.++
T Consensus        78 ~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~~~~~~~~~~~k~l~i~Gs  151 (171)
T d1pl8a2          78 ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGV  151 (171)
T ss_dssp             CSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEEC
T ss_pred             ccccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHHCCcEEEEE
Confidence            76532   222222    37999999999998899999999999999999998888999999999999999854

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.87  E-value=2e-22  Score=163.92  Aligned_cols=143  Identities=18%  Similarity=0.188  Sum_probs=116.6

Q ss_pred             CCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEec
Q 021300          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLV  234 (314)
Q Consensus       156 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~  234 (314)
                      +|+|+|+.+++++.|+|++++.. .+++|++|+|+|+|++|++++|++|.+|+ +|++++.+++++ ++++++|++.+++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~~~a-~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~-~~a~~lGa~~~i~   78 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGAELA-DIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICV-EAAKFYGATDILN   78 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHHHHT-TCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHH-HHHHHHTCSEEEC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHh-CCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhH-HHHHhhCcccccc
Confidence            47899999999999999999765 58999999999999999999999999998 677777776655 6678999999998


Q ss_pred             CCCH---HHHHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccc--hhh--hhcCceeEee
Q 021300          235 SRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELP--AFS--LLMGEEEDSW  300 (314)
Q Consensus       235 ~~~~---~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~--~~~--~~~~~~~i~~  300 (314)
                      +++.   +.+.++++  ++|++|||+|+..+++.++++++++|+++.+|.++....++  ...  ...+++++.+
T Consensus        79 ~~~~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g  153 (174)
T d1jqba2          79 YKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKG  153 (174)
T ss_dssp             GGGSCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBCCEEEE
T ss_pred             ccchhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCccEEEE
Confidence            8774   34555554  69999999999888999999999999999999876543333  322  3446667663

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.87  E-value=6.9e-22  Score=159.77  Aligned_cols=144  Identities=31%  Similarity=0.552  Sum_probs=128.0

Q ss_pred             CCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecC
Q 021300          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS  235 (314)
Q Consensus       156 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~  235 (314)
                      +|+++||+++++..|||+++++.. +++|++|||+|+|++|++++++++..|++|++++.++++. +.++++|++.++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al~~~~-~~~g~~vlv~G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~-~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKALKVTG-AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKL-ELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHT-CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHH-HHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhC-CCCCCEEEEeecccchhhhhHHHhcCCCeEeccCCCHHHh-hhhhhcCcceeccc
Confidence            579999999999999999998776 8999999999999999999999999999999988888776 55688999999998


Q ss_pred             CCH---HHHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300          236 RDQ---DEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       236 ~~~---~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~  301 (314)
                      .+.   ..+++.+.+.|.+++++++...+..++++++++|+++.+|.+.++..++...++.+++++.++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~gs  147 (168)
T d1rjwa2          79 LKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGS  147 (168)
T ss_dssp             TTSCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEEC
T ss_pred             ccchhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEecccccCCCCCCHHHHHHCCcEEEEE
Confidence            775   345566677777788888888899999999999999999998888999999999999999843

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.87  E-value=8.1e-22  Score=161.60  Aligned_cols=142  Identities=26%  Similarity=0.388  Sum_probs=118.5

Q ss_pred             cccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCC
Q 021300          158 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSR  236 (314)
Q Consensus       158 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~  236 (314)
                      ++.+|.+.|...|||+++.+..++++|++|||+|+|++|++++|+++.+|+ +|++++++++++ ++++++|++.++++.
T Consensus         3 ~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~-~~a~~lGa~~vi~~~   81 (182)
T d1vj0a2           3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRL-KLAEEIGADLTLNRR   81 (182)
T ss_dssp             HHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHH-HHHHHTTCSEEEETT
T ss_pred             HHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccc-cccccccceEEEecc
Confidence            345678899999999999888889999999999999999999999999998 788888888777 666899999999887


Q ss_pred             CHH---H---HHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC--Ccccchh-hhhcCceeEee
Q 021300          237 DQD---E---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAF-SLLMGEEEDSW  300 (314)
Q Consensus       237 ~~~---~---~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~--~~~~~~~-~~~~~~~~i~~  300 (314)
                      +.+   .   +.+..+  ++|+|||++|+..+++.++++++++|+++.+|....  +.+++.. .++.|++++.+
T Consensus        82 ~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G  156 (182)
T d1vj0a2          82 ETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKG  156 (182)
T ss_dssp             TSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEE
T ss_pred             ccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcEEEE
Confidence            642   2   334443  699999999998889999999999999999997643  4555554 46778999884

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.87  E-value=3e-22  Score=165.21  Aligned_cols=150  Identities=15%  Similarity=0.269  Sum_probs=124.7

Q ss_pred             CCcccccccchhhhhhhhhhHhcCCCCCCCEEEEE-cC-ChHHHHHHHHHHHCCCeEEEEeCChhhH---HHHHHHcCCc
Q 021300          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV-GL-GGLGHVAVKFAKAMGVKVTVISTSPSKK---SEAIERLGAD  230 (314)
Q Consensus       156 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~-Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~---~~~~~~~ga~  230 (314)
                      +|+++||++++++.|||++|.+..++++|++++|+ |+ |++|++++|+||.+|+++|++++.++..   .+.++++|++
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad   80 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT   80 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc
Confidence            58999999999999999999988889999999997 55 9999999999999999999998776543   3456789999


Q ss_pred             EEecCCCHH------HHHHHc----CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC-CCcccchhhhhcCceeEe
Q 021300          231 SFLVSRDQD------EMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGEEEDS  299 (314)
Q Consensus       231 ~~v~~~~~~------~~~~~~----~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~i~  299 (314)
                      .++++++.+      .+.+..    +++|++||++|+.. +..++++|+++|+++.+|..+ .+.++|...++.|++++.
T Consensus        81 ~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~~~i~  159 (189)
T d1gu7a2          81 QVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSA  159 (189)
T ss_dssp             EEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHH-HHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEE
T ss_pred             EEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcch-hhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCCcEEE
Confidence            999875532      233332    37999999999775 899999999999999999765 468899999999999998


Q ss_pred             -eeccccc
Q 021300          300 -WWQHDWG  306 (314)
Q Consensus       300 -~~~~~~~  306 (314)
                       ++.+.|.
T Consensus       160 G~~~~~~~  167 (189)
T d1gu7a2         160 GFWVTELL  167 (189)
T ss_dssp             ECCHHHHH
T ss_pred             EEEehHhh
Confidence             4444443

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.86  E-value=2.1e-22  Score=163.68  Aligned_cols=142  Identities=30%  Similarity=0.398  Sum_probs=118.7

Q ss_pred             cccccccchhhhhhhhhhHhcC-CCCCCCEEEEEcCChHHHHHHHHHHHCCCeE-EEEeCChhhHHHHHHHcCCcEEecC
Q 021300          158 LDATAPLLCAGITVYSPLRFYG-LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKV-TVISTSPSKKSEAIERLGADSFLVS  235 (314)
Q Consensus       158 ~~~aa~~~~~~~ta~~~l~~~~-~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~v-i~v~~~~~~~~~~~~~~ga~~~v~~  235 (314)
                      +.++|++++++.|||+++.+.. .+++|++|+|+|+|++|++++|+++.+|+.. ++++.+++ +.++++++|++.++++
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~-k~~~~~~~ga~~~i~~   84 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEE-KLKLAERLGADHVVDA   84 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHH-HHHHHHHTTCSEEEET
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhH-HHHHHhhcccceeecC
Confidence            4678899999999999998765 3799999999999999999999999999855 44555554 4577789999999988


Q ss_pred             CCH--HHHHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300          236 RDQ--DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       236 ~~~--~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~  301 (314)
                      .+.  +...+.+.  ++|++||++|+..+++.++++++++|+++.+|. ..+.+++...++.|++++.++
T Consensus        85 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~-~~~~~~~~~~l~~k~~~i~Gs  153 (172)
T d1h2ba2          85 RRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGY-GGELRFPTIRVISSEVSFEGS  153 (172)
T ss_dssp             TSCHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCC-SSCCCCCHHHHHHTTCEEEEC
T ss_pred             cccHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeC-cccccCCHHHHHhCCcEEEEE
Confidence            763  23334443  699999999998789999999999999999996 456889999999999999843

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.86  E-value=2.4e-22  Score=162.94  Aligned_cols=143  Identities=31%  Similarity=0.361  Sum_probs=124.1

Q ss_pred             CCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEe
Q 021300          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFL  233 (314)
Q Consensus       156 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v  233 (314)
                      +++.+||+++|+..|||+++++.. +++|++|+|+|+ |++|++++|+++..|+ +|++++.+++++ ++++++|++.++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al~~~~-~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~-~~~~~~Ga~~~i   78 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAVRKAS-LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV-EAAKRAGADYVI   78 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHTT-CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH-HHHHHHTCSEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhC-CCCCCEEEEEeccccceeeeeecccccccccccccccchhhH-HHHHHcCCceee
Confidence            578899999999999999997755 899999999996 9999999999999996 777777777665 666899999999


Q ss_pred             cCCCHHHHH---HHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          234 VSRDQDEMQ---AAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       234 ~~~~~~~~~---~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                      ++.+.+..+   +.+.  ++|++|||+|+..+++.++++++++|+++.+|.+..+.+++...++.|++++.+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~G  150 (170)
T d1jvba2          79 NASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVG  150 (170)
T ss_dssp             ETTTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCCCCCHHHHHHHTCEEEE
T ss_pred             ccCCcCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCccccCHHHHHhCCcEEEE
Confidence            887765433   3332  699999999998888999999999999999999888899999999999999984

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=3.1e-22  Score=163.60  Aligned_cols=137  Identities=23%  Similarity=0.271  Sum_probs=117.1

Q ss_pred             CCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEec
Q 021300          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV  234 (314)
Q Consensus       156 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~  234 (314)
                      +|+++||+++++..|||++|.+..++++|++|||+|+ |++|++++|+|+..|++|++++++++++ ++++++|++.++|
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~-~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA-QSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHH-HHHHhcCCeEEEE
Confidence            5899999999999999999998888999999999976 8899999999999999999999998887 5557899999999


Q ss_pred             CCCHH---HHHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcC
Q 021300          235 SRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMG  294 (314)
Q Consensus       235 ~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~  294 (314)
                      +++++   .++++++  ++|+++|++|.+ .+..++++++++|+++.+|.... +..++...+..+
T Consensus        80 ~~~~d~~~~v~~~t~g~g~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  144 (179)
T d1qora2          80 YREEDLVERLKEITGGKKVRVVYDSVGRD-TWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQK  144 (179)
T ss_dssp             TTTSCHHHHHHHHTTTCCEEEEEECSCGG-GHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHT
T ss_pred             CCCCCHHHHHHHHhCCCCeEEEEeCccHH-HHHHHHHHHhcCCeeeecccccCCccccchhhhhcc
Confidence            88865   4445554  699999999977 49999999999999999987654 455555554443

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.86  E-value=2.8e-21  Score=157.09  Aligned_cols=142  Identities=24%  Similarity=0.284  Sum_probs=113.6

Q ss_pred             cccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCC
Q 021300          158 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSR  236 (314)
Q Consensus       158 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~  236 (314)
                      +.+||.+.|++.|+|+++.+.+++++|++|+|+|+|++|++++|+++.+|+ +|++++.+++++ ++++++|++.++|+.
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl-~~a~~lGa~~~i~~~   80 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKF-PKAIELGATECLNPK   80 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHHHTTCSEEECGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHH-HHHHHcCCcEEEcCC
Confidence            457899999999999998777779999999999999999999999999998 566666666555 777899999999875


Q ss_pred             CHH----HHHH-Hc-CCccEEEEccCCcccHHHHHHhhcc-CCEEEEEcCCCCCcccchhh-hhcCceeEee
Q 021300          237 DQD----EMQA-AM-GTMDGIIDTVSAVHPLMPLIGLLKS-QGKLVLVGAPEKPLELPAFS-LLMGEEEDSW  300 (314)
Q Consensus       237 ~~~----~~~~-~~-~~~d~v~d~~g~~~~~~~~~~~l~~-~G~~v~~G~~~~~~~~~~~~-~~~~~~~i~~  300 (314)
                      +.|    ...+ .+ +++|++||++|+..++..++..+++ +|+++++|.++....+++.. ++.++++|.+
T Consensus        81 ~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~G  152 (174)
T d1p0fa2          81 DYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKG  152 (174)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEE
T ss_pred             CchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEE
Confidence            432    2222 23 3799999999999888899998877 59999999876655665532 3346788873

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.85  E-value=1.3e-21  Score=159.29  Aligned_cols=144  Identities=18%  Similarity=0.148  Sum_probs=113.7

Q ss_pred             CcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCC
Q 021300          157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR  236 (314)
Q Consensus       157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~  236 (314)
                      ++++||+++|++.|+|+++.+.++++|||+|||+|+|++|++++|+++.+|+++++++++.+++.++++++|++.++++.
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            57889999999999999998777799999999999999999999999999986555555545555788999999999875


Q ss_pred             CH-----HHHHHHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC--CCcccchhhhhcCceeEee
Q 021300          237 DQ-----DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE--KPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       237 ~~-----~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~--~~~~~~~~~~~~~~~~i~~  300 (314)
                      +.     ..+++.. +++|++||++|+...+..+..+++++|+++.++...  .....+....+.+++++.+
T Consensus        82 ~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~G  153 (176)
T d2fzwa2          82 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKG  153 (176)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEE
T ss_pred             chhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCEEEE
Confidence            42     2233333 379999999999888889999999998888776543  3344444555567888873

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.85  E-value=2e-21  Score=159.28  Aligned_cols=137  Identities=23%  Similarity=0.216  Sum_probs=116.5

Q ss_pred             cccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH-
Q 021300          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD-  239 (314)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~-  239 (314)
                      ++++++..|||++|.+..++++||+|||+|+ |.+|++++|++|..|++||++++++++. +.++++|++.++++++.+ 
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~-~~~~~~Ga~~vi~~~~~~~   86 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI-AYLKQIGFDAAFNYKTVNS   86 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHTTCSEEEETTSCSC
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHH-HHHHhhhhhhhcccccccH
Confidence            4678889999999998988999999999987 9999999999999999999999998766 556899999999987764 


Q ss_pred             --HHHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC-------CCcccchhhhhcCceeEee
Q 021300          240 --EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-------KPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       240 --~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-------~~~~~~~~~~~~~~~~i~~  300 (314)
                        .+.+.++  ++|+|||++|.+ .++.++++++++|+++.+|..+       .+..++...++.|++++.+
T Consensus        87 ~~~~~~~~~~~Gvd~v~D~vG~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g  157 (182)
T d1v3va2          87 LEEALKKASPDGYDCYFDNVGGE-FLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEG  157 (182)
T ss_dssp             HHHHHHHHCTTCEEEEEESSCHH-HHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEE
T ss_pred             HHHHHHHhhcCCCceeEEecCch-hhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEE
Confidence              3333433  799999999976 5999999999999999999632       2455667889999999983

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.85  E-value=1.3e-21  Score=160.40  Aligned_cols=139  Identities=22%  Similarity=0.311  Sum_probs=115.0

Q ss_pred             ccccccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCC
Q 021300          159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD  237 (314)
Q Consensus       159 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~  237 (314)
                      +|||++++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|++++++++++++. +.++++|++.++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~-~~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR-EMLSRLGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHHTTCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeecccccc-cccccccccccccCCc
Confidence            5789999999999999988888999999999986 9999999999999999999999988776 5668999999999888


Q ss_pred             HHHHH---HHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCccc-chhhhhcCceeEe
Q 021300          238 QDEMQ---AAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLEL-PAFSLLMGEEEDS  299 (314)
Q Consensus       238 ~~~~~---~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~-~~~~~~~~~~~i~  299 (314)
                      ++..+   +.++  ++|++||++|+. .+..++++|+++|+++.+|..+..... .....+.++.++.
T Consensus        80 ~~~~~~v~~~t~~~g~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~  146 (183)
T d1pqwa_          80 VDFADEILELTDGYGVDVVLNSLAGE-AIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFS  146 (183)
T ss_dssp             STHHHHHHHHTTTCCEEEEEECCCTH-HHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEE
T ss_pred             cCHHHHHHHHhCCCCEEEEEecccch-HHHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEE
Confidence            75444   4443  699999999986 599999999999999999976543222 2233345666665

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.85  E-value=3.3e-21  Score=156.96  Aligned_cols=143  Identities=21%  Similarity=0.293  Sum_probs=116.6

Q ss_pred             CCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEec
Q 021300          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLV  234 (314)
Q Consensus       156 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~  234 (314)
                      .++++|+.++|++.|+|+++.+..++++|++|+|+|+|++|++++|+++.+|+ +|++++.+++++ ++++++|++.++|
T Consensus         2 ~P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl-~~Ak~~GA~~~in   80 (176)
T d1d1ta2           2 APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKF-EKAMAVGATECIS   80 (176)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHHTCSEEEC
T ss_pred             cCHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHH-HHHHhcCCcEEEC
Confidence            35889999999999999999777779999999999999999999999999996 788888888777 6779999999998


Q ss_pred             CCCHH----HHHHHc--CCccEEEEccCCcccHHHHHHhhccC-CEEEEEcCCCCCcc--cchhhhhcCceeEee
Q 021300          235 SRDQD----EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEKPLE--LPAFSLLMGEEEDSW  300 (314)
Q Consensus       235 ~~~~~----~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~--~~~~~~~~~~~~i~~  300 (314)
                      +.+.+    .+.+.+  .++|+++|++|...++..++..+.++ |+++.+|.+..+..  ++... +.+++++++
T Consensus        81 ~~~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~-~~~~~~i~G  154 (176)
T d1d1ta2          81 PKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPML-LFTGRTWKG  154 (176)
T ss_dssp             GGGCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHH-HHTTCEEEE
T ss_pred             ccccchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHH-HhCCCEEEE
Confidence            76542    233332  37999999999998788888888665 99999998865444  44444 446778873

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=1.8e-21  Score=158.35  Aligned_cols=144  Identities=20%  Similarity=0.237  Sum_probs=122.5

Q ss_pred             CCcccccccchhhhhhhhhh---HhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE
Q 021300          156 TPLDATAPLLCAGITVYSPL---RFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS  231 (314)
Q Consensus       156 ~~~~~aa~~~~~~~ta~~~l---~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~  231 (314)
                      +++.+|+.++++..|||+++   ...+..+++++|||+|+ |++|++++|+||.+|++|+++++++++.+ .++++|++.
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~-~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHE-YLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH-HHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHH-HHHhhcccc
Confidence            57889999999999999765   44554556679999987 99999999999999999999999998875 458999999


Q ss_pred             EecCCCHHHHHHHcC-CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEeee
Q 021300          232 FLVSRDQDEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDSWW  301 (314)
Q Consensus       232 ~v~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~~~  301 (314)
                      ++++++.+..+.+.. .+|.++|++|+.. +..++++++++|+++.+|..++ ..+++...++.|++++.++
T Consensus        80 vi~~~~~~~~~~l~~~~~~~vvD~Vgg~~-~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~k~~~i~G~  150 (177)
T d1o89a2          80 VLPRDEFAESRPLEKQVWAGAIDTVGDKV-LAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGV  150 (177)
T ss_dssp             EEEGGGSSSCCSSCCCCEEEEEESSCHHH-HHHHHHTEEEEEEEEECCCTTCSCCCCCSHHHHHHCCEEEEC
T ss_pred             ccccccHHHHHHHHhhcCCeeEEEcchHH-HHHHHHHhccccceEeecccCCccccccHHHHHHCCCeEEEE
Confidence            999887665444443 5899999999875 9999999999999999998764 6788999999999999853

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.81  E-value=1.8e-19  Score=146.44  Aligned_cols=143  Identities=23%  Similarity=0.258  Sum_probs=114.9

Q ss_pred             CcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecC
Q 021300          157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVS  235 (314)
Q Consensus       157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~  235 (314)
                      ++++||+++|++.|+|+++.+.+++++||+|+|+|+|++|++++++++..++ +|++++++++++ ++++++|++.++|+
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl-~~a~~~GAd~~in~   80 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKF-EKAKVFGATDFVNP   80 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHTTCCEEECG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHH-HHHHHcCCcEEEcC
Confidence            5788999999999999999777779999999999999999999999999988 566666666655 66789999999987


Q ss_pred             CCH----HHHHHHc--CCccEEEEccCCcccHHHHHHhhccCCE-EEEEcCCCCCcccchhhhhcCceeEee
Q 021300          236 RDQ----DEMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGK-LVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       236 ~~~----~~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~-~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                      .+.    ....+.+  +++|+++|++|+..++..++.+++++|. ++..|.......++...++.+++++.+
T Consensus        81 ~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~i~G  152 (175)
T d1cdoa2          81 NDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKG  152 (175)
T ss_dssp             GGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEE
T ss_pred             CCcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcEEEE
Confidence            553    2223332  3799999999998878888888887754 455566556667777777888888884

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=3.6e-20  Score=152.29  Aligned_cols=124  Identities=19%  Similarity=0.203  Sum_probs=102.5

Q ss_pred             CCcccccccchhhhhhhhhhHhcCCCCCC--CEEEEEcC-ChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcE
Q 021300          156 TPLDATAPLLCAGITVYSPLRFYGLDKPG--MHVGVVGL-GGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADS  231 (314)
Q Consensus       156 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g--~~vlI~Ga-g~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~  231 (314)
                      +|+.+.+ ++++..|||+++....++++|  ++|||+|+ |++|++++|+||..|++ ++.+++++++..++.+++|++.
T Consensus         2 ~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~   80 (187)
T d1vj1a2           2 LSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA   80 (187)
T ss_dssp             GGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred             ccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE
Confidence            5666654 778899999999988888988  88999986 99999999999999996 4456778888888888999999


Q ss_pred             EecCCCHHH---HHHHcC-CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          232 FLVSRDQDE---MQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       232 ~v~~~~~~~---~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      ++|+.+++.   +++... ++|++||++|... +...+++++++|+++.+|..+
T Consensus        81 vi~~~~~~~~~~~~~~~~~GvDvv~D~vGg~~-~~~~~~~l~~~G~iv~~G~~s  133 (187)
T d1vj1a2          81 AVNYKTGNVAEQLREACPGGVDVYFDNVGGDI-SNTVISQMNENSHIILCGQIS  133 (187)
T ss_dssp             EEETTSSCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEEEEEEEC----
T ss_pred             EeeccchhHHHHHHHHhccCceEEEecCCchh-HHHHhhhccccccEEEecccc
Confidence            999988643   444433 7999999999774 999999999999999999743

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.80  E-value=2.5e-19  Score=145.73  Aligned_cols=143  Identities=18%  Similarity=0.240  Sum_probs=111.4

Q ss_pred             CcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecC
Q 021300          157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVS  235 (314)
Q Consensus       157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~  235 (314)
                      ++++||+++|++.|+|+++.+.+++++||+|||+|+|++|++++++++..|+ +|+++++++++. ++++++|++..+++
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~-~~a~~~Ga~~~i~~   80 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKF-AKAKEVGATECVNP   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHTTCSEEECG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHH-HHHHHhCCeeEEec
Confidence            5788999999999999999888889999999999999999999999999987 666666666665 67789999998876


Q ss_pred             CCH----HHHH-HHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEE-cCCCCCc-ccchhhhhcCceeEee
Q 021300          236 RDQ----DEMQ-AAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLV-GAPEKPL-ELPAFSLLMGEEEDSW  300 (314)
Q Consensus       236 ~~~----~~~~-~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~-G~~~~~~-~~~~~~~~~~~~~i~~  300 (314)
                      .+.    +... +.. +++|++||++|....+..++..++++|..+.+ +.++... ......++.+++++.+
T Consensus        81 ~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~G  153 (176)
T d2jhfa2          81 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKG  153 (176)
T ss_dssp             GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEE
T ss_pred             CCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEE
Confidence            442    2222 222 37999999999998888999999887555555 4444333 3333456678899884

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.78  E-value=7.8e-19  Score=144.97  Aligned_cols=139  Identities=22%  Similarity=0.150  Sum_probs=110.3

Q ss_pred             ccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCC
Q 021300          159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRD  237 (314)
Q Consensus       159 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~  237 (314)
                      ++.+.++.++.|+|++++.. .+++|++|||+|+|++|++++++++..|+ +|++++.+++++ ++++++|++.++++.+
T Consensus         2 ~d~~~l~d~~~ta~~a~~~a-~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl-~~a~~~Ga~~~~~~~~   79 (195)
T d1kola2           2 RDLTCLSDILPTGYHGAVTA-GVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARL-AHAKAQGFEIADLSLD   79 (195)
T ss_dssp             HHHGGGGTHHHHHHHHHHHT-TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHTTCEEEETTSS
T ss_pred             chHHhcccHHHHHHHHHHHh-CCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhh-HhhhhccccEEEeCCC
Confidence            45677899999999999765 58999999999999999999999999998 666666766555 7778999999998877


Q ss_pred             HH---HHHHHcC--CccEEEEccCCc---------------ccHHHHHHhhccCCEEEEEcCCCCC-------------c
Q 021300          238 QD---EMQAAMG--TMDGIIDTVSAV---------------HPLMPLIGLLKSQGKLVLVGAPEKP-------------L  284 (314)
Q Consensus       238 ~~---~~~~~~~--~~d~v~d~~g~~---------------~~~~~~~~~l~~~G~~v~~G~~~~~-------------~  284 (314)
                      .+   .+.++++  ++|++||++|..               .++..++++++++|+++++|.+..+             .
T Consensus        80 ~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~~  159 (195)
T d1kola2          80 TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSL  159 (195)
T ss_dssp             SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCC
T ss_pred             cCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCce
Confidence            54   4445544  699999999843               4689999999999999999986432             2


Q ss_pred             ccchhhhhcCceeEe
Q 021300          285 ELPAFSLLMGEEEDS  299 (314)
Q Consensus       285 ~~~~~~~~~~~~~i~  299 (314)
                      .++...++.|++++.
T Consensus       160 ~~~~~~~~~k~~~i~  174 (195)
T d1kola2         160 SIRFGLGWAKSHSFH  174 (195)
T ss_dssp             CCCHHHHHHTTCEEE
T ss_pred             eeeHHHHHhhcceec
Confidence            344445555666654

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.76  E-value=3.8e-19  Score=143.04  Aligned_cols=134  Identities=21%  Similarity=0.292  Sum_probs=109.1

Q ss_pred             hhhhhhh---hhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH--
Q 021300          167 AGITVYS---PLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE--  240 (314)
Q Consensus       167 ~~~ta~~---~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~--  240 (314)
                      +..|||.   +|.+.+..+++++|||+|+ |++|.+++|+||.+|++|+.+++++++.+.+ +++|++.++++++...  
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~-~~lGad~vi~~~~~~~~~   82 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL-KQLGASEVISREDVYDGT   82 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH-HHHTCSEEEEHHHHCSSC
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH-HhhcccceEeccchhchh
Confidence            4566664   4556666678889999987 9999999999999999999999998887554 7899999987653211  


Q ss_pred             HHHH-cCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEeeec
Q 021300          241 MQAA-MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDSWWQ  302 (314)
Q Consensus       241 ~~~~-~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~~~~  302 (314)
                      ..+. .+++|+|||++|... +..++++|+++|+++.+|...+ +.+++...++.|++++.+..
T Consensus        83 ~~~~~~~gvd~vid~vgg~~-~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~  145 (167)
T d1tt7a2          83 LKALSKQQWQGAVDPVGGKQ-LASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGID  145 (167)
T ss_dssp             CCSSCCCCEEEEEESCCTHH-HHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECC
T ss_pred             hhcccCCCceEEEecCcHHH-HHHHHHHhccCceEEEeeccCCCcccCCHHHHHHCCcEEEEEe
Confidence            1111 137999999999885 9999999999999999998764 67999999999999998643

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.59  E-value=8.6e-15  Score=114.34  Aligned_cols=133  Identities=13%  Similarity=0.018  Sum_probs=97.3

Q ss_pred             ccchhhhccCC----CCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCC
Q 021300           11 KNAFGWAAKDT----SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS   86 (314)
Q Consensus        11 ~~~~~~~~~~~----~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   86 (314)
                      .|++.+..+..    +..|++++.++|+|++||||||+++.++++.....+.   + .+....+..+++|+|++  |+.+
T Consensus         4 ~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~---~-~~~g~~~~g~~vg~Vv~--S~~~   77 (147)
T d1v3va1           4 AKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASK---R-LKEGAVMMGQQVARVVE--SKNS   77 (147)
T ss_dssp             EEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGG---G-SCTTSBCCCCEEEEEEE--ESCT
T ss_pred             cEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEccccccccc---c-cccCCccccceEEEEEE--eCCC
Confidence            45666665522    3558999999999999999999999999876543322   1 22334556688999988  7888


Q ss_pred             CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcc-----cc
Q 021300           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLD-----AT  161 (314)
Q Consensus        87 ~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~-----~a  161 (314)
                      +|++||+|.                                      ..++|+||.+++...+.++|...+..     ..
T Consensus        78 ~f~~GD~V~--------------------------------------g~~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~  119 (147)
T d1v3va1          78 AFPAGSIVL--------------------------------------AQSGWTTHFISDGKGLEKLLTEWPDKKIQYHEH  119 (147)
T ss_dssp             TSCTTCEEE--------------------------------------ECCCSBSEEEECSSSCEECCTTCCTTSSCCCEE
T ss_pred             cccCCCEEE--------------------------------------EccCCEeEEEeccceeeEccccccccccchhhh
Confidence            999999996                                      34679999999999999998765432     33


Q ss_pred             cccchhhhh-hhhhhHhcCCCCCCCEEEE
Q 021300          162 APLLCAGIT-VYSPLRFYGLDKPGMHVGV  189 (314)
Q Consensus       162 a~~~~~~~t-a~~~l~~~~~~~~g~~vlI  189 (314)
                      +.+....+| ||..+...  .+.|++||+
T Consensus       120 ~~lG~~Gmtaay~gl~~~--~k~Getvv~  146 (147)
T d1v3va1         120 VTKGFENMPAAFIEMLNG--ANLGKAVVT  146 (147)
T ss_dssp             EEECGGGHHHHHHHHHTT--CCSSEEEEE
T ss_pred             HhccccchHHHHHHhhCC--CCCCCEEEe
Confidence            455666666 45455433  488999986

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.34  E-value=4.9e-13  Score=91.78  Aligned_cols=73  Identities=26%  Similarity=0.323  Sum_probs=63.2

Q ss_pred             CCcccccccchhhhhhhhhhH---hcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC
Q 021300          156 TPLDATAPLLCAGITVYSPLR---FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA  229 (314)
Q Consensus       156 ~~~~~aa~~~~~~~ta~~~l~---~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga  229 (314)
                      +|+++|+.++++..|||.++.   +....++++++||+|+ |++|.+++|+++.+|++|+++++++++. ++++++||
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~-~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH-EYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH-HHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHH-HHHHHCCC
Confidence            578999999999999988764   4455789999999987 9999999999999999999999998887 44477875

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.48  E-value=5.4e-07  Score=70.10  Aligned_cols=99  Identities=20%  Similarity=0.243  Sum_probs=80.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc----
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV----  258 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~----  258 (314)
                      +.-+|+|+|+|.+|+.|++.|+.+|+.|.+++.+.++.+++...++........+.+.+.+....+|+||-++=-+    
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalipG~~a  110 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRA  110 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSC
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecCCccc
Confidence            5688999999999999999999999999999999999988877766433333455566677777899999986321    


Q ss_pred             --ccHHHHHHhhccCCEEEEEcCCC
Q 021300          259 --HPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       259 --~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                        -.....++.|++|..+|++....
T Consensus       111 P~lIt~~mv~~Mk~GSVIVDvaidq  135 (168)
T d1pjca1         111 PILVPASLVEQMRTGSVIVDVAVDQ  135 (168)
T ss_dssp             CCCBCHHHHTTSCTTCEEEETTCTT
T ss_pred             CeeecHHHHhhcCCCcEEEEeecCC
Confidence              13678999999999999998653

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.26  E-value=3.4e-06  Score=66.36  Aligned_cols=97  Identities=21%  Similarity=0.240  Sum_probs=73.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecC-C----------------------CHH
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS-R----------------------DQD  239 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~-~----------------------~~~  239 (314)
                      +.-+|+|+|+|.+|+.|++.|+.+|+.|.+++.+.++++++ ++++...+... .                      ..+
T Consensus        28 ~pa~VvViGaGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l-~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQV-ESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH-HHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcCcHHHHHHHHHHHHcCCEEEEEeccHHHHHHH-HHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            45689999999999999999999999999999999988777 56776443210 0                      012


Q ss_pred             HHHHHcCCccEEEEccC---Cc---ccHHHHHHhhccCCEEEEEcCC
Q 021300          240 EMQAAMGTMDGIIDTVS---AV---HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       240 ~~~~~~~~~d~v~d~~g---~~---~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      .+.+.....|+||-++-   ..   -.....++.|++|..+|++...
T Consensus       107 ~l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaid  153 (183)
T d1l7da1         107 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVE  153 (183)
T ss_dssp             HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGG
T ss_pred             HHHHHHHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeec
Confidence            33344557999998763   21   2467899999999999999764

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.15  E-value=1.2e-05  Score=64.22  Aligned_cols=86  Identities=13%  Similarity=0.092  Sum_probs=68.8

Q ss_pred             hhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-----CcEEecCCCHHHHHHHc
Q 021300          172 YSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-----ADSFLVSRDQDEMQAAM  245 (314)
Q Consensus       172 ~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-----a~~~v~~~~~~~~~~~~  245 (314)
                      +......+.--+|.++||.|+ |++|..+++.+...|++|+++.++.++.+++.+++.     .....|..+.+.+.+..
T Consensus        11 ~~~~~~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~   90 (191)
T d1luaa1          11 ALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAV   90 (191)
T ss_dssp             HHHHHHTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHT
T ss_pred             HHHHHHcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHh
Confidence            333344454568999999997 999999999999999999999999988877766553     23446777788888888


Q ss_pred             CCccEEEEccCC
Q 021300          246 GTMDGIIDTVSA  257 (314)
Q Consensus       246 ~~~d~v~d~~g~  257 (314)
                      +++|++|++.|.
T Consensus        91 ~~iDilin~Ag~  102 (191)
T d1luaa1          91 KGAHFVFTAGAI  102 (191)
T ss_dssp             TTCSEEEECCCT
T ss_pred             cCcCeeeecCcc
Confidence            999999999874

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.10  E-value=1.7e-05  Score=66.42  Aligned_cols=100  Identities=20%  Similarity=0.303  Sum_probs=75.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecC---CCHHHH-------HHHcCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS---RDQDEM-------QAAMGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~---~~~~~~-------~~~~~~~d~v  251 (314)
                      +|+++||.|+ +++|.+.++.+...|++|++..+++++.+++.++++.+.....   .+++.+       .+..+.+|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            6788999887 9999999999999999999999999999999999987655433   333322       2223579999


Q ss_pred             EEccCCc-------------------------ccHHHHHHhhc-cCCEEEEEcCCCC
Q 021300          252 IDTVSAV-------------------------HPLMPLIGLLK-SQGKLVLVGAPEK  282 (314)
Q Consensus       252 ~d~~g~~-------------------------~~~~~~~~~l~-~~G~~v~~G~~~~  282 (314)
                      ++++|..                         .....+++.|+ .+|+++.+++..+
T Consensus        85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~  141 (253)
T d1hxha_          85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS  141 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhh
Confidence            9999842                         12445666675 5799999987544

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=5.5e-05  Score=62.76  Aligned_cols=101  Identities=18%  Similarity=0.228  Sum_probs=76.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc--EEecCCCHHHHHHHc---CCccEEEEcc
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAM---GTMDGIIDTV  255 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~--~~v~~~~~~~~~~~~---~~~d~v~d~~  255 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|+++.+++++.+++.++++..  ...|-.+++.+++..   +.+|++++++
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnA   84 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA   84 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEecc
Confidence            36899999987 99999999999999999999999999999998888743  234666666666554   3799999998


Q ss_pred             CCc-------------------------ccHHHHHHh-hc--cCCEEEEEcCCCC
Q 021300          256 SAV-------------------------HPLMPLIGL-LK--SQGKLVLVGAPEK  282 (314)
Q Consensus       256 g~~-------------------------~~~~~~~~~-l~--~~G~~v~~G~~~~  282 (314)
                      |..                         ...+.+++. ++  .+|+++.+++..+
T Consensus        85 g~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~  139 (244)
T d1pr9a_          85 AVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCS  139 (244)
T ss_dssp             CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred             ccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccc
Confidence            742                         123334543 33  3689999987643

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=98.00  E-value=3e-05  Score=64.85  Aligned_cols=100  Identities=22%  Similarity=0.346  Sum_probs=74.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHH-------cCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~-------~~~~d~v  251 (314)
                      +|+++||.|+ +++|.+.++.+...|++|+++.+++++.+++.++++....   .|-.+++.+.++       .+.+|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            5889999997 9999999999999999999999999999999999885432   244444433322       3579999


Q ss_pred             EEccCCc-------------------------ccHHHHHHhhc--cCCEEEEEcCCCC
Q 021300          252 IDTVSAV-------------------------HPLMPLIGLLK--SQGKLVLVGAPEK  282 (314)
Q Consensus       252 ~d~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~G~~~~  282 (314)
                      ++++|..                         ...+.+++.|+  .+|++|.+++..+
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~  141 (254)
T d1hdca_          84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAG  141 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchh
Confidence            9998832                         12344555553  4799999987543

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.97  E-value=2.9e-05  Score=64.47  Aligned_cols=98  Identities=20%  Similarity=0.343  Sum_probs=73.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE---EecCCCHHHHHH-------HcCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQA-------AMGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~---~v~~~~~~~~~~-------~~~~~d~v  251 (314)
                      +|.++||.|+ +++|.+.++.+...|++|+++.+++++.+++.++++.+.   ..|-.+++.+.+       ..+++|++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL   82 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence            5788999887 999999999999999999999999999999988887543   234445443322       23579999


Q ss_pred             EEccCCc-------------------------ccHHHHHHhhc--cCCEEEEEcCC
Q 021300          252 IDTVSAV-------------------------HPLMPLIGLLK--SQGKLVLVGAP  280 (314)
Q Consensus       252 ~d~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~G~~  280 (314)
                      ++++|..                         ...+.+++.|+  .+|+++.+++.
T Consensus        83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~  138 (243)
T d1q7ba_          83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSV  138 (243)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecch
Confidence            9998732                         12455666763  47999999875

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.96  E-value=5.1e-05  Score=62.97  Aligned_cols=101  Identities=18%  Similarity=0.228  Sum_probs=74.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHH-------cCCccE
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDG  250 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~-------~~~~d~  250 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|++..+++++.+++.++++....   .|-.+++.++++       .+.+|+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi   83 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   83 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence            36789999987 9999999999999999999999999999999988875433   244455433322       357999


Q ss_pred             EEEccCCc-------------------------ccHHHHHHhhc--cCCEEEEEcCCCC
Q 021300          251 IIDTVSAV-------------------------HPLMPLIGLLK--SQGKLVLVGAPEK  282 (314)
Q Consensus       251 v~d~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~G~~~~  282 (314)
                      +++++|..                         ...+.+++.|.  .+|+++.+++..+
T Consensus        84 linnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~  142 (244)
T d1nffa_          84 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEG  142 (244)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccc
Confidence            99999843                         11233555553  4699999988654

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.92  E-value=4.6e-05  Score=63.69  Aligned_cols=75  Identities=15%  Similarity=0.270  Sum_probs=60.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe---cCCCHHHHHHH-------cCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL---VSRDQDEMQAA-------MGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v---~~~~~~~~~~~-------~~~~d~v  251 (314)
                      +|+++||.|+ +++|.+.++.+...|++|+++.++.++.+++.++++.+...   |-.+++.+.++       .+.+|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            5788999987 99999999999999999999999999999999999865433   44455433332       3579999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      +++.|.
T Consensus        84 VnnAg~   89 (256)
T d1k2wa_          84 VNNAAL   89 (256)
T ss_dssp             EECCCC
T ss_pred             Eeeccc
Confidence            999883

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.91  E-value=0.0001  Score=61.04  Aligned_cols=75  Identities=23%  Similarity=0.304  Sum_probs=61.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc--EEecCCCHHHHHHHc---CCccEEEEccC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAM---GTMDGIIDTVS  256 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~--~~v~~~~~~~~~~~~---~~~d~v~d~~g  256 (314)
                      .|+++||.|+ +++|.+.++.+...|++|+++.+++++.+++.++++..  ...|-.+++.+.+..   +++|++++++|
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg   83 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCc
Confidence            5899999997 99999999999999999999999999998888888642  234556666666554   36999999988


Q ss_pred             C
Q 021300          257 A  257 (314)
Q Consensus       257 ~  257 (314)
                      .
T Consensus        84 ~   84 (242)
T d1cyda_          84 L   84 (242)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.86  E-value=1.7e-05  Score=64.63  Aligned_cols=102  Identities=23%  Similarity=0.217  Sum_probs=70.6

Q ss_pred             hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHH---cCCc-EEecCCCHHHHHHHcCC
Q 021300          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIER---LGAD-SFLVSRDQDEMQAAMGT  247 (314)
Q Consensus       174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~~---~ga~-~~v~~~~~~~~~~~~~~  247 (314)
                      .++... +++|++||-+|+|. |..++.+++..|  .+|+.++.+++..+.+.+.   .+.+ ..+...+........+.
T Consensus        67 ~l~~l~-l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~~~~~~  144 (213)
T d1dl5a1          67 FMEWVG-LDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSP  144 (213)
T ss_dssp             HHHHTT-CCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCC
T ss_pred             HHHhhh-ccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHccccccc
Confidence            344444 89999999999876 888889998765  4899999888765554433   3432 22222232211122356


Q ss_pred             ccEEEEccCCcccHHHHHHhhccCCEEEEE
Q 021300          248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       248 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~  277 (314)
                      ||.|+.+.+-......+++.|++||+++..
T Consensus       145 fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         145 YDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             EEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             hhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence            999998877666678899999999999874

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=0.00011  Score=61.22  Aligned_cols=99  Identities=18%  Similarity=0.264  Sum_probs=73.5

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE--ecCCCHHHHHHH-------cCCccEE
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF--LVSRDQDEMQAA-------MGTMDGI  251 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~--v~~~~~~~~~~~-------~~~~d~v  251 (314)
                      -.|+++||.|+ +++|.+.++.+...|++|++..+++++.+++.++++....  .|-.+++.++++       .+++|++
T Consensus         4 l~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil   83 (250)
T d1ydea1           4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   83 (250)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            36899999997 9999999999999999999999999999888888774322  344555433332       3579999


Q ss_pred             EEccCCc--------------------------ccHHHHHHhhcc-CCEEEEEcCC
Q 021300          252 IDTVSAV--------------------------HPLMPLIGLLKS-QGKLVLVGAP  280 (314)
Q Consensus       252 ~d~~g~~--------------------------~~~~~~~~~l~~-~G~~v~~G~~  280 (314)
                      ++++|..                          ...+.+++.|++ +|+++.+++.
T Consensus        84 VnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~  139 (250)
T d1ydea1          84 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSL  139 (250)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCH
T ss_pred             EecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccc
Confidence            9998832                          123445566644 6899999875

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.81  E-value=0.00015  Score=55.97  Aligned_cols=102  Identities=23%  Similarity=0.303  Sum_probs=72.3

Q ss_pred             hHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEE
Q 021300          175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       175 l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d  253 (314)
                      .+..+. -.+.++||+|+|.+|..+++.+...|+ +++++.|+.++.+++.++++... +...   .+.+....+|+||.
T Consensus        16 ~~~~~~-l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~-~~~~---~~~~~l~~~Divi~   90 (159)
T d1gpja2          16 ERELGS-LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA-VRFD---ELVDHLARSDVVVS   90 (159)
T ss_dssp             HHHHSC-CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE-CCGG---GHHHHHHTCSEEEE
T ss_pred             HHHhCC-cccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhccc-ccch---hHHHHhccCCEEEE
Confidence            344443 578899999999999999999998998 68888999889889999998653 3322   33344457999999


Q ss_pred             ccCCccc---HHHHHHhhc--cCC---EEEEEcCCC
Q 021300          254 TVSAVHP---LMPLIGLLK--SQG---KLVLVGAPE  281 (314)
Q Consensus       254 ~~g~~~~---~~~~~~~l~--~~G---~~v~~G~~~  281 (314)
                      |++....   -...-..++  +.+   .+++++.|.
T Consensus        91 atss~~~ii~~~~i~~~~~~r~~~~~~~iiDlavPr  126 (159)
T d1gpja2          91 ATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR  126 (159)
T ss_dssp             CCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred             ecCCCCccccHhhhHHHHHhcccCCCeEEEeecCCC
Confidence            9986531   222223332  222   588888764

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.79  E-value=0.0001  Score=62.27  Aligned_cols=74  Identities=26%  Similarity=0.342  Sum_probs=58.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHH-------HcCCccEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQA-------AMGTMDGI  251 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~-------~~~~~d~v  251 (314)
                      .|+++||.|+ +++|.+.++.+...|++|+++.+++++.+++.++++.+..   .|-.+++.+.+       ..+.+|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            5889999987 9999999999999999999999999999899888885433   24444443332       23579999


Q ss_pred             EEccC
Q 021300          252 IDTVS  256 (314)
Q Consensus       252 ~d~~g  256 (314)
                      ++++|
T Consensus        84 vnnAG   88 (276)
T d1bdba_          84 IPNAG   88 (276)
T ss_dssp             ECCCC
T ss_pred             ccccc
Confidence            99987

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.78  E-value=0.00019  Score=59.68  Aligned_cols=98  Identities=21%  Similarity=0.304  Sum_probs=70.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHH----HHcCCcEE---ecCCCHHHHHH-------HcCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI----ERLGADSF---LVSRDQDEMQA-------AMGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~----~~~ga~~~---v~~~~~~~~~~-------~~~~  247 (314)
                      .|+++||.|+ +++|.+.++.+...|++|+++.++.++..++.    +++|.+..   .|-.+++.+.+       ..+.
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999987 99999999999999999999999988765544    44465432   24455543332       2357


Q ss_pred             ccEEEEccCCc-------------------------ccHHHHHHhhc--cCCEEEEEcCC
Q 021300          248 MDGIIDTVSAV-------------------------HPLMPLIGLLK--SQGKLVLVGAP  280 (314)
Q Consensus       248 ~d~v~d~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~G~~  280 (314)
                      +|++++++|..                         ...+.+++.|+  .+|+++.+++.
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~  143 (251)
T d1vl8a_          84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSL  143 (251)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCG
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccc
Confidence            99999999842                         12445677774  46899999764

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.77  E-value=2.2e-05  Score=63.85  Aligned_cols=102  Identities=29%  Similarity=0.348  Sum_probs=72.4

Q ss_pred             hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHH---HHHHHcCCcEE-ecCCCHHHHHHHcCCcc
Q 021300          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS---EAIERLGADSF-LVSRDQDEMQAAMGTMD  249 (314)
Q Consensus       174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~---~~~~~~ga~~~-v~~~~~~~~~~~~~~~d  249 (314)
                      .++... +++|++||.+|+|. |+.++.+++..|.+|+.+...++-..   +..+++|.+.+ +...+...-....+.||
T Consensus        70 ml~~L~-l~~g~~VLeIGsGs-GY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~~~~~pfD  147 (215)
T d1jg1a_          70 MLEIAN-LKPGMNILEVGTGS-GWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYD  147 (215)
T ss_dssp             HHHHHT-CCTTCCEEEECCTT-SHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEE
T ss_pred             HHHhhc-cCccceEEEecCCC-ChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCCcccCcce
Confidence            344444 89999999999875 88888899888888999999865433   33456675433 33333211112235799


Q ss_pred             EEEEccCCcccHHHHHHhhccCCEEEEE
Q 021300          250 GIIDTVSAVHPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       250 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~  277 (314)
                      .++-+.+........++.|++||+++..
T Consensus       148 ~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         148 VIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             EEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             eEEeecccccCCHHHHHhcCCCCEEEEE
Confidence            9998877666678899999999999875

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=0.00018  Score=59.92  Aligned_cols=100  Identities=14%  Similarity=0.206  Sum_probs=71.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-----CcEE---ecCCCHHHHHHH-------cC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-----ADSF---LVSRDQDEMQAA-------MG  246 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-----a~~~---v~~~~~~~~~~~-------~~  246 (314)
                      .|+++||.|+ +++|.+.++.+...|++|+++.++.++.+++.+++.     .+..   .|-.+++.++++       .+
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            5889999987 999999999999999999999999988777766652     2222   244454433322       35


Q ss_pred             CccEEEEccCCcc-----------------cHHHHHHhhcc-----CCEEEEEcCCCC
Q 021300          247 TMDGIIDTVSAVH-----------------PLMPLIGLLKS-----QGKLVLVGAPEK  282 (314)
Q Consensus       247 ~~d~v~d~~g~~~-----------------~~~~~~~~l~~-----~G~~v~~G~~~~  282 (314)
                      ++|++++++|...                 ....+++.|++     +|+++.+++..+
T Consensus        82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~  139 (254)
T d2gdza1          82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG  139 (254)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhh
Confidence            7999999998431                 23345555543     488999987543

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=0.00027  Score=58.47  Aligned_cols=109  Identities=15%  Similarity=0.278  Sum_probs=76.0

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHH-------HHcCC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQ-------AAMGT  247 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~-------~~~~~  247 (314)
                      -.|.++||.|+ +++|...+..+...|++|++++++.++.+++.+++   |.+.   ..|-.+++.+.       +..+.
T Consensus         5 l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~   84 (244)
T d1yb1a_           5 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD   84 (244)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            36899999997 99999999999999999999999998877775544   4332   23455554333       22347


Q ss_pred             ccEEEEccCCc-------------------------ccHHHHHHhhcc--CCEEEEEcCCCCCcccchhh
Q 021300          248 MDGIIDTVSAV-------------------------HPLMPLIGLLKS--QGKLVLVGAPEKPLELPAFS  290 (314)
Q Consensus       248 ~d~v~d~~g~~-------------------------~~~~~~~~~l~~--~G~~v~~G~~~~~~~~~~~~  290 (314)
                      .|++++++|..                         .....+++.|.+  .|+++.+++..+....+...
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~  154 (244)
T d1yb1a_          85 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLL  154 (244)
T ss_dssp             CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHH
T ss_pred             CceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcH
Confidence            99999999843                         123445666644  58899998876655555433

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.74  E-value=0.00018  Score=59.70  Aligned_cols=100  Identities=23%  Similarity=0.300  Sum_probs=72.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHH-------HcCCccEEE
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQA-------AMGTMDGII  252 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~-------~~~~~d~v~  252 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|++..++++.. ++.++.+...+ .|-.+++.+.+       ..+.+|+++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            46899999997 9999999999999999999999987654 56677776543 34455443332       235799999


Q ss_pred             EccCCc-------------------------ccHHHHHHhhcc--CCEEEEEcCCCC
Q 021300          253 DTVSAV-------------------------HPLMPLIGLLKS--QGKLVLVGAPEK  282 (314)
Q Consensus       253 d~~g~~-------------------------~~~~~~~~~l~~--~G~~v~~G~~~~  282 (314)
                      +++|..                         ...+.+++.|++  +|+++.+++..+
T Consensus        82 nnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~  138 (248)
T d2d1ya1          82 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG  138 (248)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             EeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccc
Confidence            998832                         124456667754  689999987543

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.71  E-value=0.00017  Score=60.00  Aligned_cols=100  Identities=17%  Similarity=0.182  Sum_probs=71.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--cEE---ecCCCHHHHH-------HHcCCcc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DSF---LVSRDQDEMQ-------AAMGTMD  249 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~~~---v~~~~~~~~~-------~~~~~~d  249 (314)
                      .|.++||.|+ +++|.+.++.+...|++|+++.+++++.+++.++++.  ...   .|-.+++.+.       +..+++|
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   84 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence            5788999887 9999999999999999999999999988888877753  221   2444444332       2235799


Q ss_pred             EEEEccCCc-------------------------ccHHHHHHhhcc---CCEEEEEcCCCC
Q 021300          250 GIIDTVSAV-------------------------HPLMPLIGLLKS---QGKLVLVGAPEK  282 (314)
Q Consensus       250 ~v~d~~g~~-------------------------~~~~~~~~~l~~---~G~~v~~G~~~~  282 (314)
                      ++++++|..                         .....+++.|++   +|+++.+++..+
T Consensus        85 iLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~  145 (251)
T d1zk4a1          85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEG  145 (251)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGG
T ss_pred             EEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccce
Confidence            999998843                         123445566643   358888877543

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.70  E-value=0.00027  Score=58.29  Aligned_cols=100  Identities=21%  Similarity=0.327  Sum_probs=75.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe---cCCCHHHHHHH-------cCCccE
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL---VSRDQDEMQAA-------MGTMDG  250 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v---~~~~~~~~~~~-------~~~~d~  250 (314)
                      -.|.++||.|+ +++|.+.++-+...|++|+++.++.++.+++.++++.+...   |-.+++.++++       .+.+|+
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi   82 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   82 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            36889999987 99999999999999999999999999999999999865433   44445433322       357999


Q ss_pred             EEEccCCc-------------------------ccHHHHHHhhccCCEEEEEcCCC
Q 021300          251 IIDTVSAV-------------------------HPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       251 v~d~~g~~-------------------------~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      +++++|..                         ...+..+..++.++.++.++...
T Consensus        83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a  138 (241)
T d2a4ka1          83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVA  138 (241)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCT
T ss_pred             eccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccc
Confidence            99988732                         12344566777778877776643

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=4.1e-05  Score=62.75  Aligned_cols=97  Identities=26%  Similarity=0.240  Sum_probs=66.4

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHHc---CC-----c-EEecCCCHHHHHHHcCCc
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERL---GA-----D-SFLVSRDQDEMQAAMGTM  248 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~~~---ga-----~-~~v~~~~~~~~~~~~~~~  248 (314)
                      .+++|++||-+|+|. |+.++.+++..+  .+|+.++..++..+.+.+.+   +.     + ..+...+-.......+.|
T Consensus        73 ~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~~~~~~f  151 (224)
T d1i1na_          73 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPY  151 (224)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCE
T ss_pred             ccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccccchhhhh
Confidence            479999999999875 888888888765  48999999887655443322   21     1 111111211111123469


Q ss_pred             cEEEEccCCcccHHHHHHhhccCCEEEEE
Q 021300          249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       249 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~  277 (314)
                      |.|+-+..........++.|++||+++..
T Consensus       152 D~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         152 DAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             EEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             hhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence            99998877666678899999999999884

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.68  E-value=0.00028  Score=59.12  Aligned_cols=99  Identities=15%  Similarity=0.262  Sum_probs=71.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc---E--EecCCCHHHHHHH-------cCCc
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD---S--FLVSRDQDEMQAA-------MGTM  248 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~---~--~v~~~~~~~~~~~-------~~~~  248 (314)
                      -.|+++||.|+ +++|.+.++.+...|++|+++.+++++.+++.++++..   .  ..|-.+++.++++       .+.+
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   83 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            36889999987 99999999999999999999999999988888887631   1  1244555433332       3579


Q ss_pred             cEEEEccCCc---------------------------ccHHHHHHhhc--cCCEEEEEcCC
Q 021300          249 DGIIDTVSAV---------------------------HPLMPLIGLLK--SQGKLVLVGAP  280 (314)
Q Consensus       249 d~v~d~~g~~---------------------------~~~~~~~~~l~--~~G~~v~~G~~  280 (314)
                      |++++++|..                           ...+.+++.|.  .+|+++.+++.
T Consensus        84 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~  144 (268)
T d2bgka1          84 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASI  144 (268)
T ss_dssp             CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCG
T ss_pred             ceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccc
Confidence            9999998732                           12344666663  45888888654

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.68  E-value=0.00034  Score=58.28  Aligned_cols=100  Identities=18%  Similarity=0.283  Sum_probs=69.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-----CCcEE---ecCCCHHHHHHH-------cC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GADSF---LVSRDQDEMQAA-------MG  246 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~-----ga~~~---v~~~~~~~~~~~-------~~  246 (314)
                      .|+++||.|+ +++|.+.++.+...|++|+++.+++++.+++.+++     +....   .|-.+++.+.++       .+
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            5788999987 99999999999999999999999988766554433     22322   244555433332       35


Q ss_pred             CccEEEEccCCc--------------------------ccHHHHHHhhc--cCCEEEEEcCCCC
Q 021300          247 TMDGIIDTVSAV--------------------------HPLMPLIGLLK--SQGKLVLVGAPEK  282 (314)
Q Consensus       247 ~~d~v~d~~g~~--------------------------~~~~~~~~~l~--~~G~~v~~G~~~~  282 (314)
                      ++|++++++|..                          ...+.++..|+  .+|+++.+++..+
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~  146 (258)
T d1iy8a_          83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGG  146 (258)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG
T ss_pred             CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhh
Confidence            799999998732                          12333455553  5799999987654

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.68  E-value=0.00028  Score=58.85  Aligned_cols=98  Identities=14%  Similarity=0.232  Sum_probs=69.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHH-------HcCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQA-------AMGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~-------~~~~~  248 (314)
                      .|.++||.|+ +++|.+.++.+...|++|+++.+++++.+++.+++   |.+..   .|-.+++.+.+       ..+.+
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            6889999987 99999999999999999999999988777665554   43332   24444433332       23579


Q ss_pred             cEEEEccCCc--------------------------ccHHHHHHhh--ccCCEEEEEcCC
Q 021300          249 DGIIDTVSAV--------------------------HPLMPLIGLL--KSQGKLVLVGAP  280 (314)
Q Consensus       249 d~v~d~~g~~--------------------------~~~~~~~~~l--~~~G~~v~~G~~  280 (314)
                      |+++++.|..                          ...+.+++.|  +.+|++|.+++.
T Consensus        84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~  143 (260)
T d1zema1          84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASM  143 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeech
Confidence            9999998732                          1233455555  467999999874

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.68  E-value=8.3e-05  Score=57.91  Aligned_cols=100  Identities=17%  Similarity=0.102  Sum_probs=70.5

Q ss_pred             hhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEE
Q 021300          173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI  251 (314)
Q Consensus       173 ~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v  251 (314)
                      ..++... +.++.+|+|+|+|+.+.+++..++..|+ ++.++.|+.++.+.+.+.++...+ +...       ...+|++
T Consensus         7 ~~l~~~~-~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~-~~~~-------~~~~Dli   77 (167)
T d1npya1           7 KLIEKYH-LNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYI-NSLE-------NQQADIL   77 (167)
T ss_dssp             HHHHHTT-CCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEE-SCCT-------TCCCSEE
T ss_pred             HHHHHcC-CCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhh-hccc-------ccchhhh
Confidence            3555555 4678899999999999999999999997 788999999999899888886553 2111       1358999


Q ss_pred             EEccCCc-----c--cHHHHHHhhccCCEEEEEcCCC
Q 021300          252 IDTVSAV-----H--PLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       252 ~d~~g~~-----~--~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      ++|+.-.     .  .+......+.+...++++-..+
T Consensus        78 INaTpiGm~~~~~~~~l~~~~~~~~~~~~v~D~vY~P  114 (167)
T d1npya1          78 VNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMP  114 (167)
T ss_dssp             EECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSS
T ss_pred             eeccccCCccccccccccccHhhcCCcceEEEEeecc
Confidence            9997521     0  0111123456677777775433

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.67  E-value=5e-05  Score=59.39  Aligned_cols=102  Identities=17%  Similarity=0.125  Sum_probs=70.3

Q ss_pred             hhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc---EEecCCCHHHHHHHcCCcc
Q 021300          173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD---SFLVSRDQDEMQAAMGTMD  249 (314)
Q Consensus       173 ~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~---~~v~~~~~~~~~~~~~~~d  249 (314)
                      .+|+..+...+|.+|||+|+|+.+.+++..+...|++++++.|+.++.+++.+.+...   ..+...+     .....+|
T Consensus         7 ~~l~~~~~~~~~k~vlIlGaGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~-----~~~~~~d   81 (170)
T d1nyta1           7 SDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDE-----LEGHEFD   81 (170)
T ss_dssp             HHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGG-----GTTCCCS
T ss_pred             HHHHHcCCCCCCCEEEEECCcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccccccc-----ccccccc
Confidence            4565555457899999999999999999999999999999999999988888877531   1221111     1224699


Q ss_pred             EEEEccCCccc---HHHHHHhhccCCEEEEEcC
Q 021300          250 GIIDTVSAVHP---LMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       250 ~v~d~~g~~~~---~~~~~~~l~~~G~~v~~G~  279 (314)
                      ++++|+.....   ...-...++++..++++-.
T Consensus        82 liIN~Tp~G~~~~~~~~~~~~~~~~~~v~D~vY  114 (170)
T d1nyta1          82 LIINATSSGISGDIPAIPSSLIHPGIYCYDMFY  114 (170)
T ss_dssp             EEEECCSCGGGTCCCCCCGGGCCTTCEEEESCC
T ss_pred             eeecccccCcccCCCCCcHHHhccCcEEEEeec
Confidence            99999853210   1112345666666666644

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.65  E-value=0.00034  Score=57.87  Aligned_cols=100  Identities=14%  Similarity=0.239  Sum_probs=70.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcCCcEEe---cCCCHHHHHHH-------cCCccE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADSFL---VSRDQDEMQAA-------MGTMDG  250 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~~~~~ga~~~v---~~~~~~~~~~~-------~~~~d~  250 (314)
                      +|.++||.|+ +++|.+.++.+...|++|++..+++. ..+...+++|.+...   |-.+++.+.++       .+++|+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5788999987 99999999999999999999998754 344556777754332   44555433322       357999


Q ss_pred             EEEccCCc-------------------------ccHHHHHHhhc--cCCEEEEEcCCCC
Q 021300          251 IIDTVSAV-------------------------HPLMPLIGLLK--SQGKLVLVGAPEK  282 (314)
Q Consensus       251 v~d~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~G~~~~  282 (314)
                      +++++|..                         ...+.+++.|+  .+|+++.+++..+
T Consensus        84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~  142 (247)
T d2ew8a1          84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTY  142 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchh
Confidence            99999842                         12334555664  3689999987543

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.63  E-value=9e-05  Score=60.53  Aligned_cols=100  Identities=18%  Similarity=0.076  Sum_probs=68.2

Q ss_pred             hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC---cEEecCCCHHHHHHHcCCccE
Q 021300          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA---DSFLVSRDQDEMQAAMGTMDG  250 (314)
Q Consensus       174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga---~~~v~~~~~~~~~~~~~~~d~  250 (314)
                      .++.. .+++|++||-+|+|. |+.++.+++. +.+|+.++.+++....+.+.+..   ..++..+...-. ...+.||.
T Consensus        62 ml~~L-~l~~g~~VLdIG~Gs-Gy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~-~~~~pfD~  137 (224)
T d1vbfa_          62 MLDEL-DLHKGQKVLEIGTGI-GYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGY-EEEKPYDR  137 (224)
T ss_dssp             HHHHT-TCCTTCEEEEECCTT-SHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCC-GGGCCEEE
T ss_pred             HHHHh-hhcccceEEEecCCC-CHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccccccccCchhhcc-hhhhhHHH
Confidence            34433 489999999999874 7788777775 67999999988776555444331   122222111111 11346999


Q ss_pred             EEEccCCcccHHHHHHhhccCCEEEEE
Q 021300          251 IIDTVSAVHPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       251 v~d~~g~~~~~~~~~~~l~~~G~~v~~  277 (314)
                      |+-+.+........++.|++||+++..
T Consensus       138 Iiv~~a~~~ip~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         138 VVVWATAPTLLCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             EEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             HHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence            988776666678889999999999885

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.62  E-value=0.00041  Score=57.76  Aligned_cols=100  Identities=18%  Similarity=0.238  Sum_probs=70.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHH----H---cC-C
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQA----A---MG-T  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~----~---~~-~  247 (314)
                      .|+++||.|+ +++|.+.++.+...|++|++..+++++.+++.+++   +....   .|-.+++.+.+    .   .+ .
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999987 99999999999999999999999998877776655   33222   24444433222    1   23 5


Q ss_pred             ccEEEEccCCc-------------------------ccHHHHHHhhc--cCCEEEEEcCCCC
Q 021300          248 MDGIIDTVSAV-------------------------HPLMPLIGLLK--SQGKLVLVGAPEK  282 (314)
Q Consensus       248 ~d~v~d~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~G~~~~  282 (314)
                      +|++++++|..                         ...+.+++.|+  .+|+++.+++..+
T Consensus        87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~  148 (259)
T d2ae2a_          87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSG  148 (259)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGG
T ss_pred             ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccc
Confidence            99999998832                         12344555563  4699999987544

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.61  E-value=0.00042  Score=51.36  Aligned_cols=74  Identities=15%  Similarity=0.155  Sum_probs=61.3

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHH-cCCccEEEEccCCcc
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVH  259 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v-~~~~~~~~~~~-~~~~d~v~d~~g~~~  259 (314)
                      +|+|.|+|.+|...++.+...|..+++++.++++.+++.++++...+. |..+++.+.+. .+.+|.++-++.+..
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d~   77 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEE   77 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcHH
Confidence            689999999999999999999999999999999998887788766544 45566666665 357999999888764

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.61  E-value=0.00025  Score=58.99  Aligned_cols=75  Identities=17%  Similarity=0.357  Sum_probs=55.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHH-------HcCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQA-------AMGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~-------~~~~~  248 (314)
                      .|+++||.|+ +++|.+.++.+...|++|+++.+++++.+++.+++   |.+..   .|-.+++.+.+       ..+.+
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i   89 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            6889999987 99999999999999999999999988776665444   44332   23344433322       23579


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++++++|.
T Consensus        90 DilvnnAG~   98 (255)
T d1fmca_          90 DILVNNAGG   98 (255)
T ss_dssp             CEEEECCCC
T ss_pred             CEeeeCCcC
Confidence            999999884

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.61  E-value=0.00017  Score=59.52  Aligned_cols=75  Identities=19%  Similarity=0.363  Sum_probs=60.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHH-------cCCccEEEE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAA-------MGTMDGIID  253 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~-------~~~~d~v~d  253 (314)
                      .|+++||.|+ +++|.+.++.+...|++|+++.+++++.+++.+++++..+ .|-.+++.+.++       .+.+|++++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn   83 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence            4788999987 9999999999999999999999999999999888887544 344555433322       357999999


Q ss_pred             ccCC
Q 021300          254 TVSA  257 (314)
Q Consensus       254 ~~g~  257 (314)
                      ++|.
T Consensus        84 nAG~   87 (242)
T d1ulsa_          84 YAGI   87 (242)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            9884

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.60  E-value=0.00025  Score=55.09  Aligned_cols=97  Identities=13%  Similarity=0.149  Sum_probs=71.7

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe--cCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL--VSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v--~~~~~~~~~~~~~~~d~v~d~~g~~~~~  261 (314)
                      +.+|+|+|+|.+|..+++.+...|.+|+++.++.++..++.++++...+.  +..............|.++.+.......
T Consensus         2 ~K~IliiGaG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~   81 (182)
T d1e5qa1           2 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFHA   81 (182)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCGGGHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccchhhh
Confidence            57899999999999999999988999999999999999998877754332  2223344445556788888877765545


Q ss_pred             HHHHHhhccCCEEEEEcCC
Q 021300          262 MPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       262 ~~~~~~l~~~G~~v~~G~~  280 (314)
                      .....+++.+-.++.+...
T Consensus        82 ~~~~~~~~~~~~~~~~~~~  100 (182)
T d1e5qa1          82 TVIKSAIRQKKHVVTTSYV  100 (182)
T ss_dssp             HHHHHHHHHTCEEECSSCC
T ss_pred             HHHHHHHhhccceeecccC
Confidence            5555566666677766543

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=0.00056  Score=56.86  Aligned_cols=76  Identities=16%  Similarity=0.182  Sum_probs=56.5

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---C--CcEE---ecCCCHHHHH-------HHc
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---G--ADSF---LVSRDQDEMQ-------AAM  245 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---g--a~~~---v~~~~~~~~~-------~~~  245 (314)
                      -+|+++||.|+ +++|.+.++.+...|++|+++.+++++.+++.+++   +  .+.+   .|-.+++.+.       +..
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            35788999987 99999999999999999999999998887776554   2  1222   2445554332       233


Q ss_pred             CCccEEEEccCC
Q 021300          246 GTMDGIIDTVSA  257 (314)
Q Consensus       246 ~~~d~v~d~~g~  257 (314)
                      +++|++|+++|.
T Consensus        88 g~iD~lVnnAg~   99 (257)
T d1xg5a_          88 SGVDICINNAGL   99 (257)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CCCCEEEecccc
Confidence            579999999984

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.58  E-value=0.00052  Score=49.47  Aligned_cols=100  Identities=11%  Similarity=-0.049  Sum_probs=69.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhh-HHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~-~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      -.|.+|||+|+|.+|..-++.+...|++++++...... ...+.++-..+..-..-.+    +...++++|+-++++...
T Consensus        10 l~~k~vlVvG~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~----~dl~~~~lv~~at~d~~~   85 (113)
T d1pjqa1          10 LRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDE----TLLDSCWLAIAATDDDTV   85 (113)
T ss_dssp             CBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCG----GGGTTCSEEEECCSCHHH
T ss_pred             eCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCH----HHhCCCcEEeecCCCHHH
Confidence            35789999999999999999999999999988765543 3333332223222111111    223579999999999875


Q ss_pred             HHHHHHhhccCCEEEEEcCCCCCcc
Q 021300          261 LMPLIGLLKSQGKLVLVGAPEKPLE  285 (314)
Q Consensus       261 ~~~~~~~l~~~G~~v~~G~~~~~~~  285 (314)
                      -.......++.|.++.+...+...+
T Consensus        86 n~~i~~~a~~~~ilVNv~D~p~~~d  110 (113)
T d1pjqa1          86 NQRVSDAAESRRIFCNVVDAPKAAS  110 (113)
T ss_dssp             HHHHHHHHHHTTCEEEETTCTTSSS
T ss_pred             HHHHHHHHHHcCCEEEeCCChhhCC
Confidence            5677788889999988866544333

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.58  E-value=0.00031  Score=58.56  Aligned_cols=100  Identities=14%  Similarity=0.235  Sum_probs=67.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh-hhHHHHH----HHcCCcEEe---cCCCHHHHHHH-------cC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAI----ERLGADSFL---VSRDQDEMQAA-------MG  246 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~-~~~~~~~----~~~ga~~~v---~~~~~~~~~~~-------~~  246 (314)
                      +|.++||.|+ +++|.+.++.+...|++|+++.+++ +..+++.    ++.|.+...   |-.+++.+.++       .+
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            5788999887 9999999999999999999999874 3333333    334554443   34444433322       35


Q ss_pred             CccEEEEccCCc-------------------------ccHHHHHHhhcc--CCEEEEEcCCCC
Q 021300          247 TMDGIIDTVSAV-------------------------HPLMPLIGLLKS--QGKLVLVGAPEK  282 (314)
Q Consensus       247 ~~d~v~d~~g~~-------------------------~~~~~~~~~l~~--~G~~v~~G~~~~  282 (314)
                      ++|++++++|..                         ...+.+++.|++  +|+++.+++..+
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~  145 (260)
T d1x1ta1          83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHG  145 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccc
Confidence            799999999843                         124445666653  689999987543

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=0.00016  Score=59.87  Aligned_cols=100  Identities=15%  Similarity=0.206  Sum_probs=71.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHH---HHcCCccEEEEccC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQ---AAMGTMDGIIDTVS  256 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~---~~~~~~d~v~d~~g  256 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|+++.+++++.+++.+..+.... .|....+.+.   +..+..|+++++.|
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag   83 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEeccc
Confidence            46889999987 9999999999999999999999999888887766665432 3334443333   33458999999988


Q ss_pred             Cc-------------------------ccHHHHHHhh--ccCCEEEEEcCCC
Q 021300          257 AV-------------------------HPLMPLIGLL--KSQGKLVLVGAPE  281 (314)
Q Consensus       257 ~~-------------------------~~~~~~~~~l--~~~G~~v~~G~~~  281 (314)
                      ..                         ...+.+++.+  +.+|+++.+++..
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~  135 (245)
T d2ag5a1          84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVA  135 (245)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSB
T ss_pred             ccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechh
Confidence            43                         1123344434  3568999998653

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=0.00037  Score=58.33  Aligned_cols=107  Identities=22%  Similarity=0.274  Sum_probs=72.0

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCcEEe---cCCCHHH-------HHHHcC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADSFL---VSRDQDE-------MQAAMG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----ga~~~v---~~~~~~~-------~~~~~~  246 (314)
                      -.|.++||.|+ +++|++.+..+...|++|+++.++.++.+++.++.    +.....   +..+.+.       +....+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            36899999987 99999999999999999999999998877765542    332222   2333322       222345


Q ss_pred             CccEEEEccCCc-------------------------ccHHHHHHhhc-cCCEEEEEcCCCCCcccch
Q 021300          247 TMDGIIDTVSAV-------------------------HPLMPLIGLLK-SQGKLVLVGAPEKPLELPA  288 (314)
Q Consensus       247 ~~d~v~d~~g~~-------------------------~~~~~~~~~l~-~~G~~v~~G~~~~~~~~~~  288 (314)
                      ..|+++.+.|..                         .....++..|+ .+|+++.+++..+....+.
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~  159 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPM  159 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTT
T ss_pred             CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCC
Confidence            799999887632                         12333445554 4789999987655444443

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.53  E-value=0.00045  Score=57.23  Aligned_cols=99  Identities=14%  Similarity=0.199  Sum_probs=69.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHH-------HcCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQA-------AMGTM  248 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~-------~~~~~  248 (314)
                      .+.++||.|+ +++|.+.++.+...|++|+++.+++++.+++.+++   |.+..   .|-.+++.+.+       ..+.+
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            4677888887 99999999999889999999999988877666554   43332   24444443332       23579


Q ss_pred             cEEEEccCCc-------------------------ccHHHHHHhh--ccCCEEEEEcCCC
Q 021300          249 DGIIDTVSAV-------------------------HPLMPLIGLL--KSQGKLVLVGAPE  281 (314)
Q Consensus       249 d~v~d~~g~~-------------------------~~~~~~~~~l--~~~G~~v~~G~~~  281 (314)
                      |+++++.|..                         .....+++.|  ..+|++|.+++..
T Consensus        89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~  148 (251)
T d2c07a1          89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIV  148 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTH
T ss_pred             eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHH
Confidence            9999998742                         1234455555  3469999998753

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.52  E-value=0.00023  Score=59.43  Aligned_cols=100  Identities=19%  Similarity=0.260  Sum_probs=67.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC---CcE---EecCCCHHHHH----H---Hc-CC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---ADS---FLVSRDQDEMQ----A---AM-GT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g---a~~---~v~~~~~~~~~----~---~~-~~  247 (314)
                      +|.++||.|+ +++|.+.++.+...|++|+++.+++++.+++.+++.   .+.   ..|-.+++.+.    +   .. +.
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            5889999987 999999999999999999999999988777766542   222   22444443222    2   22 45


Q ss_pred             ccEEEEccCCc-------------------------ccHHHHHHhhc--cCCEEEEEcCCCC
Q 021300          248 MDGIIDTVSAV-------------------------HPLMPLIGLLK--SQGKLVLVGAPEK  282 (314)
Q Consensus       248 ~d~v~d~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~G~~~~  282 (314)
                      +|++++++|..                         ...+.+++.|+  .+|+++.+++..+
T Consensus        87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~  148 (259)
T d1xq1a_          87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAG  148 (259)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----
T ss_pred             cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccc
Confidence            99999999843                         12344555553  4689999987543

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=0.00017  Score=60.71  Aligned_cols=97  Identities=24%  Similarity=0.384  Sum_probs=67.0

Q ss_pred             CCEE-EEEcC-ChHHHHHHHH-HHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHH-------HHcCC
Q 021300          184 GMHV-GVVGL-GGLGHVAVKF-AKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQ-------AAMGT  247 (314)
Q Consensus       184 g~~v-lI~Ga-g~vG~~a~~~-a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~-------~~~~~  247 (314)
                      |.+| ||.|+ +++|+++++. ++..|++|+++.++.++.+++++++   +.+.   ..|-.+.+.++       +..+.
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            6677 55687 9999988764 5566899999999998887776655   3221   22445544333       22357


Q ss_pred             ccEEEEccCCc-------------------------ccHHHHHHhhccCCEEEEEcCC
Q 021300          248 MDGIIDTVSAV-------------------------HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       248 ~d~v~d~~g~~-------------------------~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      +|++|+++|..                         .....++..|++.|+++.+++.
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~  139 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI  139 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence            99999999842                         1234456677889999999863

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.47  E-value=0.00049  Score=57.27  Aligned_cols=100  Identities=18%  Similarity=0.246  Sum_probs=69.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHH-------Hc-CC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQA-------AM-GT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~-------~~-~~  247 (314)
                      .|+++||.|+ +++|.+.++.+...|++|+++.+++++.+++.+++   +...   ..|-.+.+.+.+       .. +.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            6899999997 99999999999999999999999988766665544   4332   234455443322       22 35


Q ss_pred             ccEEEEccCCcc-------------------------cHHHHHHhh--ccCCEEEEEcCCCC
Q 021300          248 MDGIIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAPEK  282 (314)
Q Consensus       248 ~d~v~d~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~G~~~~  282 (314)
                      .|++++++|...                         ..+.+...+  +.+|+++.+++...
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~  146 (258)
T d1ae1a_          85 LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAG  146 (258)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGG
T ss_pred             cEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccc
Confidence            899999988431                         122334444  45789999987643

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.46  E-value=6.9e-05  Score=61.26  Aligned_cols=99  Identities=23%  Similarity=0.313  Sum_probs=63.2

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHC---C----CeEEEEeCChhhHHHHHHH--------cCC-cEEecCCCHHHHHH
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAM---G----VKVTVISTSPSKKSEAIER--------LGA-DSFLVSRDQDEMQA  243 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~---g----~~vi~v~~~~~~~~~~~~~--------~ga-~~~v~~~~~~~~~~  243 (314)
                      .+++|++||.+|+|. |+.++.+++..   |    .+|+.++..++-.+.+.+.        ++. ...+...+-.....
T Consensus        77 ~l~~g~~VLeIGtGs-GY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~~  155 (223)
T d1r18a_          77 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYP  155 (223)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCG
T ss_pred             ccCCCCeEEEecCCC-CHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccccc
Confidence            589999999999754 66666666553   4    3899998887644333222        121 12222222111111


Q ss_pred             HcCCccEEEEccCCcccHHHHHHhhccCCEEEE-EcC
Q 021300          244 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVL-VGA  279 (314)
Q Consensus       244 ~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~-~G~  279 (314)
                      ..+.||.|+-+.+-.......++.|++||+++. +|.
T Consensus       156 ~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~pvg~  192 (223)
T d1r18a_         156 PNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVGP  192 (223)
T ss_dssp             GGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEESC
T ss_pred             cccceeeEEEEeechhchHHHHHhcCCCcEEEEEEec
Confidence            234699988877766667889999999999987 453

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.42  E-value=0.00085  Score=55.67  Aligned_cols=74  Identities=19%  Similarity=0.272  Sum_probs=54.5

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHH-------HcCCcc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQA-------AMGTMD  249 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~-------~~~~~d  249 (314)
                      |+.+||.|+ +++|.+.++.+...|++|+++.+++++.+++.+++   |.+..   .|-.+++.+.+       ..+.+|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            567789887 99999999999999999999999988776665544   44332   24445543332       235799


Q ss_pred             EEEEccCC
Q 021300          250 GIIDTVSA  257 (314)
Q Consensus       250 ~v~d~~g~  257 (314)
                      ++++++|.
T Consensus        82 ilVnnAG~   89 (257)
T d2rhca1          82 VLVNNAGR   89 (257)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99999884

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=0.0015  Score=49.95  Aligned_cols=106  Identities=16%  Similarity=0.206  Sum_probs=80.6

Q ss_pred             HhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEcc
Q 021300          176 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       176 ~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      +.....-.|.+++|+|-|-+|...++.++.+|++|++++..+-+..++. --|....       .+.+.....|+++-++
T Consensus        16 r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~-~dG~~v~-------~~~~a~~~adivvtaT   87 (163)
T d1li4a1          16 RATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAA-MEGYEVT-------TMDEACQEGNIFVTTT   87 (163)
T ss_dssp             HHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEEC-------CHHHHTTTCSEEEECS
T ss_pred             HHhCceecCCEEEEeccccccHHHHHHHHhCCCeeEeeecccchhHHhh-cCceEee-------ehhhhhhhccEEEecC
Confidence            3445567999999999999999999999999999999999986554442 2244321       2345566799999999


Q ss_pred             CCcc-cHHHHHHhhccCCEEEEEcCCCCCcccchh
Q 021300          256 SAVH-PLMPLIGLLKSQGKLVLVGAPEKPLELPAF  289 (314)
Q Consensus       256 g~~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~  289 (314)
                      |+.+ .-...++.|+.+..+..+|.....++++.+
T Consensus        88 Gn~~vI~~eh~~~MKdgaIL~N~Ghfd~EId~~~L  122 (163)
T d1li4a1          88 GCIDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWL  122 (163)
T ss_dssp             SCSCSBCHHHHTTCCTTEEEEECSSSTTSBCHHHH
T ss_pred             CCccchhHHHHHhccCCeEEEEeccccceecHHHH
Confidence            9754 467788999999999999887655555543

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.38  E-value=0.00063  Score=55.65  Aligned_cols=94  Identities=16%  Similarity=0.208  Sum_probs=67.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-c-CCCHHHHHHHcCCccEEEEccCCc-
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-V-SRDQDEMQAAMGTMDGIIDTVSAV-  258 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v-~-~~~~~~~~~~~~~~d~v~d~~g~~-  258 (314)
                      +|.++||.|+ +++|.+.++.+...|++|+++.++++..    ++.+...+. | .++.+.+.+..+.+|++++++|.. 
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l----~~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~   78 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----KRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPK   78 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH----HhcCCcEEEcchHHHHHHHHHHhCCCcEEEecccccC
Confidence            4789999987 9999999999999999999999986543    455654433 2 233455556667899999998843 


Q ss_pred             ------------------------ccHHHHHHhhc--cCCEEEEEcCC
Q 021300          259 ------------------------HPLMPLIGLLK--SQGKLVLVGAP  280 (314)
Q Consensus       259 ------------------------~~~~~~~~~l~--~~G~~v~~G~~  280 (314)
                                              ...+.+++.|+  .+|+++.+++.
T Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~  126 (234)
T d1o5ia_          79 AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSF  126 (234)
T ss_dssp             CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             CcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccc
Confidence                                    12334455554  45888888764

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.37  E-value=0.00033  Score=48.68  Aligned_cols=81  Identities=21%  Similarity=0.220  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhh--HHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK--KSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~--~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      .|.+|+|+|.|..|+++++++...|++|++.++....  ..++  +.+....+...+.+.+    .++|.++-+.|-.. 
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~--~~~~~~~~~~~~~~~~----~~~d~vi~SPGi~~-   76 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKL--PEAVERHTGSLNDEWL----MAADLIVASPGIAL-   76 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGS--CTTSCEEESBCCHHHH----HHCSEEEECTTSCT-
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHH--hhccceeecccchhhh----ccCCEEEECCCCCC-
Confidence            5788999999999999999999999999999986542  2111  1233444444444333    35899999888664 


Q ss_pred             HHHHHHhhcc
Q 021300          261 LMPLIGLLKS  270 (314)
Q Consensus       261 ~~~~~~~l~~  270 (314)
                      -+..++.++.
T Consensus        77 ~~~~~~~a~~   86 (93)
T d2jfga1          77 AHPSLSAAAD   86 (93)
T ss_dssp             TSHHHHHHHH
T ss_pred             CCHHHHHHHH
Confidence            3334444433

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.33  E-value=0.00056  Score=57.39  Aligned_cols=74  Identities=18%  Similarity=0.338  Sum_probs=54.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CC--c-E---EecCCCHHHHHHH-------c
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA--D-S---FLVSRDQDEMQAA-------M  245 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga--~-~---~v~~~~~~~~~~~-------~  245 (314)
                      .|+++||.|+ +++|.+.++.+...|++|+++.+++++.+++.+++   +.  . .   ..|-.+++.+.++       .
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            5889999987 99999999999999999999999988776665544   32  1 1   2244555433322       3


Q ss_pred             CCccEEEEccC
Q 021300          246 GTMDGIIDTVS  256 (314)
Q Consensus       246 ~~~d~v~d~~g  256 (314)
                      +.+|++++++|
T Consensus        83 G~iDilVnnAG   93 (274)
T d1xhla_          83 GKIDILVNNAG   93 (274)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCceEEEeecc
Confidence            57999999987

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.32  E-value=0.00065  Score=56.45  Aligned_cols=99  Identities=18%  Similarity=0.207  Sum_probs=67.7

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh-hHHHH---HHHcCCcEEe---cCCCHHHHH-------HHcC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEA---IERLGADSFL---VSRDQDEMQ-------AAMG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~---~~~~ga~~~v---~~~~~~~~~-------~~~~  246 (314)
                      -.|+++||.|+ +++|.+.++.+...|++|++..+..+ ..+++   .++.|.+...   |-.+++.+.       +..+
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   83 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence            36899999987 99999999999999999988765543 33333   3455655433   334443322       2235


Q ss_pred             CccEEEEccCCc-------------------------ccHHHHHHhhccCCEEEEEcCC
Q 021300          247 TMDGIIDTVSAV-------------------------HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       247 ~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      .+|++++++|..                         .....+++.|+++|.++.+.+.
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~  142 (259)
T d1ja9a_          84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSI  142 (259)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccc
Confidence            799999999843                         1355577788888888887653

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.32  E-value=0.0013  Score=55.00  Aligned_cols=98  Identities=21%  Similarity=0.262  Sum_probs=68.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh-hHHHH---HHHcCCcEEe---cCCCHHHHH-------HHcCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEA---IERLGADSFL---VSRDQDEMQ-------AAMGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~---~~~~ga~~~v---~~~~~~~~~-------~~~~~  247 (314)
                      .|+++||.|+ +++|.+.++.+...|++|++..++.+ ..+++   .++.+.+...   |-.+++.+.       +..++
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   96 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK   96 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            4789999987 99999999999999999999887643 33333   3455654433   444443322       22357


Q ss_pred             ccEEEEccCCc-------------------------ccHHHHHHhhccCCEEEEEcCC
Q 021300          248 MDGIIDTVSAV-------------------------HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       248 ~d~v~d~~g~~-------------------------~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      +|+++.+.|..                         ...+.++..|.+.|+++.+++.
T Consensus        97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~  154 (272)
T d1g0oa_          97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI  154 (272)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCG
T ss_pred             CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccc
Confidence            99999998743                         1255577788889999888764

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.30  E-value=0.0019  Score=53.39  Aligned_cols=72  Identities=18%  Similarity=0.296  Sum_probs=52.3

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHH-------HcCCccEE
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQA-------AMGTMDGI  251 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~-------~~~~~d~v  251 (314)
                      .+||.|+ +++|++.++.+...|++|+++.+++++.+++.+++   |.+..   .|-.+++.+.+       ..+++|++
T Consensus         3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVI   82 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEE
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            3578887 99999999999999999999999988876665444   44332   24445443332       23579999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      ++++|.
T Consensus        83 VnnAG~   88 (255)
T d1gega_          83 VNNAGV   88 (255)
T ss_dssp             EECCCC
T ss_pred             Eecccc
Confidence            999883

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.29  E-value=0.0015  Score=54.36  Aligned_cols=75  Identities=20%  Similarity=0.275  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh-hHHHH---HHHcCCcEEe---cCCCHHHHHHH-------cCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEA---IERLGADSFL---VSRDQDEMQAA-------MGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~---~~~~ga~~~v---~~~~~~~~~~~-------~~~  247 (314)
                      .|+++||.|+ +++|.+.++.+...|++|+++.++.+ ..+++   .++.|.+...   |-.+++.+.++       .++
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   85 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5788999887 99999999999999999999998754 33333   3455654332   44444433322       357


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|++++++|.
T Consensus        86 iDiLVnnAG~   95 (261)
T d1geea_          86 LDVMINNAGL   95 (261)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEeecccee
Confidence            9999999884

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.26  E-value=0.00097  Score=52.28  Aligned_cols=110  Identities=15%  Similarity=0.149  Sum_probs=72.0

Q ss_pred             hhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHH---HHHHcC----C-cEEecCCCHHHHHH
Q 021300          173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSE---AIERLG----A-DSFLVSRDQDEMQA  243 (314)
Q Consensus       173 ~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~---~~~~~g----a-~~~v~~~~~~~~~~  243 (314)
                      .+++..+.--.+.+|+|+|+|+.+.+++..+...|+ +++++.|++++..+   +.++++    . ..+.+..+.+.+.+
T Consensus         7 ~~l~~~~~~l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   86 (182)
T d1vi2a1           7 RAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAE   86 (182)
T ss_dssp             HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH
T ss_pred             HHHHHcCCCcCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhh
Confidence            345544433477899999999999999999988888 77788887654433   333332    2 23445566555556


Q ss_pred             HcCCccEEEEccCCcc------cHHHHHHhhccCCEEEEEcCCCC
Q 021300          244 AMGTMDGIIDTVSAVH------PLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       244 ~~~~~d~v~d~~g~~~------~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      ....+|++++|+....      .+..-+..++++..++++-..+.
T Consensus        87 ~~~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y~p~  131 (182)
T d1vi2a1          87 ALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPH  131 (182)
T ss_dssp             HHHTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCCSSS
T ss_pred             hhcccceeccccCCccccccchhhhhHHHhhhcchhhHHhhcCcc
Confidence            6678999999986321      11112356788888888865433

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=97.24  E-value=0.0012  Score=54.13  Aligned_cols=98  Identities=12%  Similarity=0.175  Sum_probs=67.2

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCe-------EEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHH-------H
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVK-------VTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQA-------A  244 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~-------vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~-------~  244 (314)
                      .+||.|+ +++|.+.+..+...|++       ++...++.++.+++.+++   |....   .|-.+++.+.+       .
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4678887 99999999888888887       888899988777766554   43322   24455543332       2


Q ss_pred             cCCccEEEEccCCc-------------------------ccHHHHHHhhc--cCCEEEEEcCCCCC
Q 021300          245 MGTMDGIIDTVSAV-------------------------HPLMPLIGLLK--SQGKLVLVGAPEKP  283 (314)
Q Consensus       245 ~~~~d~v~d~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~G~~~~~  283 (314)
                      .+.+|+++++.|..                         ...+.+++.|+  .+|+++.+++..+.
T Consensus        83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~  148 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAAT  148 (240)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhc
Confidence            35799999998842                         12445666774  47899999875443

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.23  E-value=0.0012  Score=56.13  Aligned_cols=98  Identities=18%  Similarity=0.308  Sum_probs=66.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC---------hhhHHHHHHHc---CCcEEecCCCHH----HHH---
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS---------PSKKSEAIERL---GADSFLVSRDQD----EMQ---  242 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~---------~~~~~~~~~~~---ga~~~v~~~~~~----~~~---  242 (314)
                      .|.++||.|+ +++|.+.++.+...|++|++.++.         .+..+++.+++   +.....+..+.+    .+.   
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            5788999887 999999999999999999987543         33344444433   344444555542    222   


Q ss_pred             HHcCCccEEEEccCCc-------------------------ccHHHHHHhhc--cCCEEEEEcCC
Q 021300          243 AAMGTMDGIIDTVSAV-------------------------HPLMPLIGLLK--SQGKLVLVGAP  280 (314)
Q Consensus       243 ~~~~~~d~v~d~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~G~~  280 (314)
                      +..+++|++++++|..                         .....+++.|+  .+|+||.+++.
T Consensus        86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~  150 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASA  150 (302)
T ss_dssp             HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCCh
Confidence            2235799999999832                         12445666674  46899999875

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.21  E-value=0.0016  Score=53.95  Aligned_cols=100  Identities=12%  Similarity=0.071  Sum_probs=65.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHH---HHHcCCc-EE---ecCC-CHH-------HHHHHcC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGAD-SF---LVSR-DQD-------EMQAAMG  246 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~---~~~~ga~-~~---v~~~-~~~-------~~~~~~~  246 (314)
                      .|+++||.|+ +++|.+.+..+...|++++++.+..++.+.+   .+..+.. ..   .|.. +.+       .+.+..+
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g   83 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence            5889999987 9999999999999999999998876654333   2333322 21   1222 322       1222235


Q ss_pred             CccEEEEccCCcc-----------------cHHHHHHhhc-----cCCEEEEEcCCCC
Q 021300          247 TMDGIIDTVSAVH-----------------PLMPLIGLLK-----SQGKLVLVGAPEK  282 (314)
Q Consensus       247 ~~d~v~d~~g~~~-----------------~~~~~~~~l~-----~~G~~v~~G~~~~  282 (314)
                      .+|++++++|...                 ....+++.|.     ++|+++.+++..+
T Consensus        84 ~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~  141 (254)
T d1sbya1          84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG  141 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhh
Confidence            7999999998431                 2344555563     2588998877544

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=0.0011  Score=56.14  Aligned_cols=76  Identities=21%  Similarity=0.301  Sum_probs=56.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc--------CCcEE---ecCCCHHHHHH------
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--------GADSF---LVSRDQDEMQA------  243 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~--------ga~~~---v~~~~~~~~~~------  243 (314)
                      -+|.++||.|+ +++|.+.++.+...|++|+++.++.++.+++.+++        +.+.+   .|-.+++.+.+      
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   89 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   89 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence            57899999987 99999999999999999999999988776665544        22322   24445543332      


Q ss_pred             -HcCCccEEEEccCC
Q 021300          244 -AMGTMDGIIDTVSA  257 (314)
Q Consensus       244 -~~~~~d~v~d~~g~  257 (314)
                       ..+.+|++++++|.
T Consensus        90 ~~~G~iDiLVnnAg~  104 (297)
T d1yxma1          90 DTFGKINFLVNNGGG  104 (297)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHhCCeEEEEeeccc
Confidence             23579999999874

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=0.00044  Score=55.25  Aligned_cols=95  Identities=16%  Similarity=0.218  Sum_probs=68.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHHcCCccEEEEccCCcc--
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAAMGTMDGIIDTVSAVH--  259 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v-~~~~~~~~~~~~~~~d~v~d~~g~~~--  259 (314)
                      .++|+|+|+ |.+|...+..+...|.+|++++|++++.... ...+++.+. |..+++.+.+...++|+||.++|...  
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~-~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~~   81 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL   81 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-SCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc-cccccccccccccchhhHHHHhcCCCEEEEEeccCCch
Confidence            468999998 9999999998888999999999998765332 123344332 55667777777789999999987431  


Q ss_pred             --------cHHHHHHhhccC--CEEEEEcC
Q 021300          260 --------PLMPLIGLLKSQ--GKLVLVGA  279 (314)
Q Consensus       260 --------~~~~~~~~l~~~--G~~v~~G~  279 (314)
                              ....+++.++..  .+++.++.
T Consensus        82 ~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss  111 (205)
T d1hdoa_          82 SPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (205)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             hhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence                    133455566554  37888765

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.11  E-value=0.0015  Score=55.11  Aligned_cols=76  Identities=20%  Similarity=0.251  Sum_probs=55.7

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH----cCCcEE---ecCCCHHHHHH-------HcC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGADSF---LVSRDQDEMQA-------AMG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~----~ga~~~---v~~~~~~~~~~-------~~~  246 (314)
                      -.|.++||.|+ +++|.+.++.+...|++|+++.++.++..++.++    .|....   .|-.+.+.+..       ..+
T Consensus        23 l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          23 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            36799999997 9999999999999999999999998776555443    354332   24444443332       235


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      .+|+++++.|.
T Consensus       103 ~iDilvnnAg~  113 (294)
T d1w6ua_         103 HPNIVINNAAG  113 (294)
T ss_dssp             SCSEEEECCCC
T ss_pred             ccchhhhhhhh
Confidence            79999999883

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.09  E-value=0.00088  Score=55.67  Aligned_cols=75  Identities=23%  Similarity=0.330  Sum_probs=55.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH----HcCCcEE---ecCCCHHHHHH-------HcCC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE----RLGADSF---LVSRDQDEMQA-------AMGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~----~~ga~~~---v~~~~~~~~~~-------~~~~  247 (314)
                      .|+++||.|+ +++|.+.++.+...|++|+++.++.++..++.+    ++|.+..   .|-.+++.+.+       ..+.
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5788999987 999999999999999999999999877655543    4464432   24455543332       2357


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|+++++.|.
T Consensus        88 iDilVnnAg~   97 (260)
T d1h5qa_          88 ISGLIANAGV   97 (260)
T ss_dssp             EEEEEECCCC
T ss_pred             CcEecccccc
Confidence            9999999873

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=97.08  E-value=0.0023  Score=52.93  Aligned_cols=125  Identities=20%  Similarity=0.230  Sum_probs=73.4

Q ss_pred             CceEECCCCCCcccccccchhhhhh--hhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHH
Q 021300          147 HFVVRIPEGTPLDATAPLLCAGITV--YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI  224 (314)
Q Consensus       147 ~~~~~~p~~~~~~~aa~~~~~~~ta--~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~  224 (314)
                      ...+.+..++.|....    ...|.  ..++...  .++|++||=+|+|. |..++.+++ .|++|+.++.++...+.+.
T Consensus        88 ~~~i~i~pg~aFGTG~----H~TT~l~l~~l~~~--~~~g~~VLDiGcGs-G~l~i~aa~-~g~~V~gvDis~~av~~A~  159 (254)
T d2nxca1          88 EIPLVIEPGMAFGTGH----HETTRLALKALARH--LRPGDKVLDLGTGS-GVLAIAAEK-LGGKALGVDIDPMVLPQAE  159 (254)
T ss_dssp             SEEEECCCC-----CC----SHHHHHHHHHHHHH--CCTTCEEEEETCTT-SHHHHHHHH-TTCEEEEEESCGGGHHHHH
T ss_pred             ceEEEEccccccCccc----cchhhHHHHHHHhh--cCccCEEEEcccch-hHHHHHHHh-cCCEEEEEECChHHHHHHH
Confidence            4556666666654443    22222  1223322  58999999999864 666665554 6899999999988765553


Q ss_pred             ---HHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc---ccHHHHHHhhccCCEEEEEcCC
Q 021300          225 ---ERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       225 ---~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                         +..+.+..+...+... ....+.||+|+-+....   ..+..+.+.|+|||++++.|..
T Consensus       160 ~na~~n~~~~~~~~~d~~~-~~~~~~fD~V~ani~~~~l~~l~~~~~~~LkpGG~lilSgil  220 (254)
T d2nxca1         160 ANAKRNGVRPRFLEGSLEA-ALPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGIL  220 (254)
T ss_dssp             HHHHHTTCCCEEEESCHHH-HGGGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             HHHHHcCCceeEEeccccc-cccccccchhhhccccccHHHHHHHHHHhcCCCcEEEEEecc
Confidence               2345432222333221 12245799999765422   2245677899999999987754

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.08  E-value=0.00084  Score=56.19  Aligned_cols=75  Identities=19%  Similarity=0.319  Sum_probs=55.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CC---cE---EecCCCHHHHHHH-------c
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA---DS---FLVSRDQDEMQAA-------M  245 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga---~~---~v~~~~~~~~~~~-------~  245 (314)
                      +|+++||.|+ +++|.+.++.+...|++|+++.+++++.+++.+++   +.   +.   ..|-.+++.+.++       .
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5788999887 99999999999999999999999998877766554   21   11   2244455433322       3


Q ss_pred             CCccEEEEccCC
Q 021300          246 GTMDGIIDTVSA  257 (314)
Q Consensus       246 ~~~d~v~d~~g~  257 (314)
                      +.+|++++++|.
T Consensus        84 g~iDilvnnAG~   95 (272)
T d1xkqa_          84 GKIDVLVNNAGA   95 (272)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCceEEEeCCcc
Confidence            579999999874

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.08  E-value=8.3e-05  Score=61.23  Aligned_cols=99  Identities=24%  Similarity=0.221  Sum_probs=64.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCC--H---H----HHHHHc--CCccE
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD--Q---D----EMQAAM--GTMDG  250 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~--~---~----~~~~~~--~~~d~  250 (314)
                      +|.+|||.|+ +++|.+.++.+...|++|+++++.+.+..      .....+....  .   +    .+.+..  +++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            4789999997 99999999999999999998877654210      1111111111  1   1    111221  25899


Q ss_pred             EEEccCCc--------------------------ccHHHHHHhhccCCEEEEEcCCCCCcccc
Q 021300          251 IIDTVSAV--------------------------HPLMPLIGLLKSQGKLVLVGAPEKPLELP  287 (314)
Q Consensus       251 v~d~~g~~--------------------------~~~~~~~~~l~~~G~~v~~G~~~~~~~~~  287 (314)
                      +++++|..                          .....+++.|+++|+++.+++..+....+
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~  137 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP  137 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCcc
Confidence            99998731                          12344666788899999998865433333

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.07  E-value=0.0023  Score=52.80  Aligned_cols=100  Identities=21%  Similarity=0.284  Sum_probs=65.3

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCChhhHHH---HHHHcCCcEE--ecCCCHHHHHH-------HcCC
Q 021300          183 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSKKSE---AIERLGADSF--LVSRDQDEMQA-------AMGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g--~vG~~a~~~a~~~g~~vi~v~~~~~~~~~---~~~~~ga~~~--v~~~~~~~~~~-------~~~~  247 (314)
                      .|+++||.|+ |  ++|.+.++.+...|++|++..++++...+   ..+..+....  .|-.+++.+.+       ..++
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence            6889999997 5  69999999999999999888887654333   3333343222  24444433332       2357


Q ss_pred             ccEEEEccCCcc-----------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300          248 MDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       248 ~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      +|++++++|...                             ....+...++++|+++.+++...
T Consensus        87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~  150 (256)
T d1ulua_          87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYAS  150 (256)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGG
T ss_pred             ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHh
Confidence            999999987420                             11223345677899998876543

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.07  E-value=0.001  Score=51.69  Aligned_cols=102  Identities=22%  Similarity=0.168  Sum_probs=68.1

Q ss_pred             hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--cEEecCCCHHHHHHHcCCccEE
Q 021300          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DSFLVSRDQDEMQAAMGTMDGI  251 (314)
Q Consensus       174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~~~v~~~~~~~~~~~~~~~d~v  251 (314)
                      ++.......++.+|+|+|+|+.+.+++..+...+.+++++.|+.++.+.+++.++.  +......+    ......+|++
T Consensus         8 ~l~~~~~~~~~k~vlIlGaGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~----~~~~~~~dii   83 (171)
T d1p77a1           8 DLQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMD----SIPLQTYDLV   83 (171)
T ss_dssp             HHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG----GCCCSCCSEE
T ss_pred             HHHHcCCCCCCCEEEEECCcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhc----ccccccccee
Confidence            34444444688999999999999999988887778999999999999888887762  21111111    0113479999


Q ss_pred             EEccCCcc---cHHHHHHhhccCCEEEEEcC
Q 021300          252 IDTVSAVH---PLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       252 ~d~~g~~~---~~~~~~~~l~~~G~~v~~G~  279 (314)
                      ++|+....   ........++++..++++-.
T Consensus        84 IN~tp~g~~~~~~~~~~~~~~~~~~~~D~vy  114 (171)
T d1p77a1          84 INATSAGLSGGTASVDAEILKLGSAFYDMQY  114 (171)
T ss_dssp             EECCCC-------CCCHHHHHHCSCEEESCC
T ss_pred             eecccccccccccchhhhhhcccceeeeeec
Confidence            99987431   01112345666777777754

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=97.06  E-value=0.0032  Score=47.85  Aligned_cols=104  Identities=16%  Similarity=0.227  Sum_probs=80.3

Q ss_pred             HhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-CCcEEecCCCHHHHHHHcCCccEEEEc
Q 021300          176 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-GADSFLVSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       176 ~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~-ga~~~v~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      +....+-.|.+++|.|=|-+|.-.++.+|.+|++|+++..+|-+..++  .+ |.. +.      .+.+..+..|+++-+
T Consensus        15 r~t~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA--~mdGf~-v~------~~~~a~~~aDi~vTa   85 (163)
T d1v8ba1          15 RATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQA--VMEGFN-VV------TLDEIVDKGDFFITC   85 (163)
T ss_dssp             HHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHH--HTTTCE-EC------CHHHHTTTCSEEEEC
T ss_pred             HHhCceecCCEEEEecccccchhHHHHHHhCCCEEEEEecCchhhHHH--HhcCCc-cC------chhHccccCcEEEEc
Confidence            344546899999999999999999999999999999999998654444  33 332 21      234566789999999


Q ss_pred             cCCccc-HHHHHHhhccCCEEEEEcCCCCCcccch
Q 021300          255 VSAVHP-LMPLIGLLKSQGKLVLVGAPEKPLELPA  288 (314)
Q Consensus       255 ~g~~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~  288 (314)
                      +|+... -...++.|+.+..+..+|......+++.
T Consensus        86 TGn~~vI~~~h~~~MKdgaIl~N~GHfd~EIdv~~  120 (163)
T d1v8ba1          86 TGNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNE  120 (163)
T ss_dssp             CSSSSSBCHHHHTTCCTTCEEEECSSTTTSBCHHH
T ss_pred             CCCCccccHHHHHHhhCCeEEEeccccchhhhhHH
Confidence            998763 5778999999999999998765454433

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.04  E-value=0.0018  Score=50.33  Aligned_cols=90  Identities=21%  Similarity=0.246  Sum_probs=60.9

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEec-------CCC--HHHHHHHcCCccEEEEcc
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV-------SRD--QDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~-------~~~--~~~~~~~~~~~d~v~d~~  255 (314)
                      .++.|+|+|.+|++.+..+...|.+|+++++++++.+.+.+ .+......       ...  .....+....+|++|-++
T Consensus         2 k~iaIiGaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v   80 (184)
T d1bg6a2           2 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD-RGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV   80 (184)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-HTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred             CEEEEECccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEE
Confidence            58999999999999999999999999999999888766643 33211100       000  012345567899999999


Q ss_pred             CCcccHHHHHHhh----ccCCEEEE
Q 021300          256 SAVHPLMPLIGLL----KSQGKLVL  276 (314)
Q Consensus       256 g~~~~~~~~~~~l----~~~G~~v~  276 (314)
                      .... ....++.+    .++-.++.
T Consensus        81 ~~~~-~~~~~~~i~~~l~~~~~iv~  104 (184)
T d1bg6a2          81 PAIH-HASIAANIASYISEGQLIIL  104 (184)
T ss_dssp             CGGG-HHHHHHHHGGGCCTTCEEEE
T ss_pred             chhH-HHHHHHHhhhccCCCCEEEE
Confidence            7664 45554444    44444443

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.01  E-value=0.00026  Score=58.71  Aligned_cols=98  Identities=16%  Similarity=0.221  Sum_probs=66.5

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHHc---C-CcEE-ecCCCHHHHHHH-cCCccE
Q 021300          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERL---G-ADSF-LVSRDQDEMQAA-MGTMDG  250 (314)
Q Consensus       179 ~~~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~~~---g-a~~~-v~~~~~~~~~~~-~~~~d~  250 (314)
                      ..++||++||=.|+|+ |.++..+|+..+  .+++.++.+++..+.+.+.+   + .+.+ +...+..  ... .+.||.
T Consensus        81 l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~--~~~~~~~fD~  157 (250)
T d1yb2a1          81 CGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIA--DFISDQMYDA  157 (250)
T ss_dssp             CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTT--TCCCSCCEEE
T ss_pred             cCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeee--cccccceeee
Confidence            3489999999999865 677788888754  48999999988776665433   2 2221 1222211  111 236999


Q ss_pred             EEEccCC-cccHHHHHHhhccCCEEEEEcC
Q 021300          251 IIDTVSA-VHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       251 v~d~~g~-~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      |+-.... ...+..+.+.|++||+++.+..
T Consensus       158 V~ld~p~p~~~l~~~~~~LKpGG~lv~~~P  187 (250)
T d1yb2a1         158 VIADIPDPWNHVQKIASMMKPGSVATFYLP  187 (250)
T ss_dssp             EEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred             eeecCCchHHHHHHHHHhcCCCceEEEEeC
Confidence            8865544 3468999999999999998744

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.99  E-value=0.00052  Score=53.88  Aligned_cols=96  Identities=15%  Similarity=0.093  Sum_probs=64.0

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-----------------ecCCCHHHHHH
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-----------------LVSRDQDEMQA  243 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-----------------v~~~~~~~~~~  243 (314)
                      +.||.+||.+|+|. |..+..+|+. |++|+.++.++.....+.+..+....                 +..+-.+....
T Consensus        18 ~~~~~rvLd~GCG~-G~~a~~la~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~   95 (201)
T d1pjza_          18 VVPGARVLVPLCGK-SQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR   95 (201)
T ss_dssp             CCTTCEEEETTTCC-SHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred             CCCCCEEEEecCcC-CHHHHHHHHc-CCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccc
Confidence            79999999999875 7788888874 99999999999888777665442111                 00000011112


Q ss_pred             HcCCccEEEEccCCc--------ccHHHHHHhhccCCEEEEEc
Q 021300          244 AMGTMDGIIDTVSAV--------HPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       244 ~~~~~d~v~d~~g~~--------~~~~~~~~~l~~~G~~v~~G  278 (314)
                      ....+|+|++...-.        ..+..+.+.|+++|++++..
T Consensus        96 ~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          96 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             cccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence            234689888854421        23567888999999976653

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.98  E-value=0.0035  Score=51.60  Aligned_cols=98  Identities=12%  Similarity=0.091  Sum_probs=65.4

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCcEEecCCCHH----HHHHHcCCccEEEEccC
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADSFLVSRDQD----EMQAAMGTMDGIIDTVS  256 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~ga~~~v~~~~~~----~~~~~~~~~d~v~d~~g  256 (314)
                      .++||.|+ +++|++.+..+...|++|++..++.++.+++.+   .+..-.+.+..+.+    .+.+..+++|+++++.|
T Consensus         1 ~TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg   80 (252)
T d1zmta1           1 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   80 (252)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            36888887 999999999999999999999888776655532   23333344444432    22333468999999876


Q ss_pred             Cc--------------------------ccHHHHHHhhc--cCCEEEEEcCCCC
Q 021300          257 AV--------------------------HPLMPLIGLLK--SQGKLVLVGAPEK  282 (314)
Q Consensus       257 ~~--------------------------~~~~~~~~~l~--~~G~~v~~G~~~~  282 (314)
                      ..                          ...+.+++.|+  .+|++|.+++..+
T Consensus        81 ~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~  134 (252)
T d1zmta1          81 FAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATP  134 (252)
T ss_dssp             CCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTT
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccc
Confidence            31                          11234555563  3699999987654

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.98  E-value=0.00095  Score=54.71  Aligned_cols=95  Identities=17%  Similarity=0.197  Sum_probs=65.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHH-------cCCccEEEEc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA-------MGTMDGIIDT  254 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~-------~~~~d~v~d~  254 (314)
                      .|+++||.|+ +++|.+.++.+...|++|+++.++.+..+++     .....|-.+++.+.++       .+.+|+++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~-----~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnn   80 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-----FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   80 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-----EEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCc-----eEEEEecCCHHHHHHHHHHHHHhcCCceEEEee
Confidence            6789999987 9999999999999999999999987644221     1123455555433322       3579999999


Q ss_pred             cCCc-------------------------ccHHHHHHhhc--cCCEEEEEcCCCC
Q 021300          255 VSAV-------------------------HPLMPLIGLLK--SQGKLVLVGAPEK  282 (314)
Q Consensus       255 ~g~~-------------------------~~~~~~~~~l~--~~G~~v~~G~~~~  282 (314)
                      +|..                         ...+.++..|+  .+|+++.+++..+
T Consensus        81 AG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~  135 (237)
T d1uzma1          81 AGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSG  135 (237)
T ss_dssp             CSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC
T ss_pred             ecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhh
Confidence            8832                         11233455553  4579999987644

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.91  E-value=0.0012  Score=54.86  Aligned_cols=75  Identities=16%  Similarity=0.286  Sum_probs=54.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CC---cE---EecCCCHHHHHHH-------c
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA---DS---FLVSRDQDEMQAA-------M  245 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga---~~---~v~~~~~~~~~~~-------~  245 (314)
                      .|+++||.|+ +++|.+.++.+...|++|+++.+++++.+++.+++   +.   +.   ..|-.+++.+.++       .
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5788899887 99999999999999999999999988877776553   21   11   1244454433322       3


Q ss_pred             CCccEEEEccCC
Q 021300          246 GTMDGIIDTVSA  257 (314)
Q Consensus       246 ~~~d~v~d~~g~  257 (314)
                      +++|++++++|.
T Consensus        84 g~iDilvnnAG~   95 (264)
T d1spxa_          84 GKLDILVNNAGA   95 (264)
T ss_dssp             SCCCEEEECCC-
T ss_pred             CCCCEeeccccc
Confidence            579999999873

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.91  E-value=0.00082  Score=56.70  Aligned_cols=97  Identities=18%  Similarity=0.124  Sum_probs=66.1

Q ss_pred             hcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCC-cE-EecCCCHHHHHHHcCCccEE
Q 021300          177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGA-DS-FLVSRDQDEMQAAMGTMDGI  251 (314)
Q Consensus       177 ~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~ga-~~-~v~~~~~~~~~~~~~~~d~v  251 (314)
                      ...++++|++||=+|+|- |..++.+++..|++|+.++.++++.+.+.+   +.|. +. -+...+.   ....+.||.+
T Consensus        56 ~~l~l~~G~~VLDiGCG~-G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~---~~~~~~fD~i  131 (285)
T d1kpga_          56 GKLGLQPGMTLLDVGCGW-GATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGW---EQFDEPVDRI  131 (285)
T ss_dssp             TTTTCCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCG---GGCCCCCSEE
T ss_pred             HHcCCCCCCEEEEecCcc-hHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhh---hcccccccce
Confidence            344589999999999864 667888999999999999999987655533   3332 21 1222222   1234568876


Q ss_pred             EE-----ccCCc---ccHHHHHHhhccCCEEEEE
Q 021300          252 ID-----TVSAV---HPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       252 ~d-----~~g~~---~~~~~~~~~l~~~G~~v~~  277 (314)
                      +-     .++..   ..+..+.++|+|+|++++-
T Consensus       132 ~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~  165 (285)
T d1kpga_         132 VSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLH  165 (285)
T ss_dssp             EEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEE
T ss_pred             eeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEE
Confidence            54     34432   3477788999999998863

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.90  E-value=0.0024  Score=53.58  Aligned_cols=97  Identities=13%  Similarity=0.179  Sum_probs=65.2

Q ss_pred             hcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc--EEecCCCHHHHHHHcCCccEE
Q 021300          177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD--SFLVSRDQDEMQAAMGTMDGI  251 (314)
Q Consensus       177 ~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~--~~v~~~~~~~~~~~~~~~d~v  251 (314)
                      ....+++|++||=+|+|. |..+..+++..|++|+.++.+++..+.+.+.   .|..  ..+...+.   ....+.||.|
T Consensus        46 ~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~---~~~~~~fD~i  121 (280)
T d2fk8a1          46 DKLDLKPGMTLLDIGCGW-GTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGW---EDFAEPVDRI  121 (280)
T ss_dssp             TTSCCCTTCEEEEESCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCG---GGCCCCCSEE
T ss_pred             HHcCCCCCCEEEEecCCc-hHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhhhh---hhhccchhhh
Confidence            344589999999999864 4456778888899999999999887555433   3421  11111221   1334678887


Q ss_pred             EE-----ccCCc---ccHHHHHHhhccCCEEEEE
Q 021300          252 ID-----TVSAV---HPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       252 ~d-----~~g~~---~~~~~~~~~l~~~G~~v~~  277 (314)
                      +-     .++..   ..+..+.+.|+|+|++++-
T Consensus       122 ~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~  155 (280)
T d2fk8a1         122 VSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ  155 (280)
T ss_dssp             EEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred             hHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEE
Confidence            53     33332   2477889999999999874

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.90  E-value=0.0015  Score=49.64  Aligned_cols=87  Identities=16%  Similarity=0.248  Sum_probs=67.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHHHH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLI  265 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~  265 (314)
                      ++.++|+|.+|.+.+.-+...+.++++..++.++.+++.+++|....   .+.   .+.....|+||-++-.. .+...+
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~---~~~---~~~~~~~dvIilavkp~-~~~~vl   74 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYA---MSH---QDLIDQVDLVILGIKPQ-LFETVL   74 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBC---SSH---HHHHHTCSEEEECSCGG-GHHHHH
T ss_pred             EEEEEeccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeee---chh---hhhhhccceeeeecchH-hHHHHh
Confidence            57889999999988887777788999999999998898888886542   222   23344799999998644 478888


Q ss_pred             HhhccCCEEEEEcC
Q 021300          266 GLLKSQGKLVLVGA  279 (314)
Q Consensus       266 ~~l~~~G~~v~~G~  279 (314)
                      +.++++..++.+..
T Consensus        75 ~~l~~~~~iis~~a   88 (152)
T d2ahra2          75 KPLHFKQPIISMAA   88 (152)
T ss_dssp             TTSCCCSCEEECCT
T ss_pred             hhcccceeEecccc
Confidence            88888877776643

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.89  E-value=0.0011  Score=48.88  Aligned_cols=72  Identities=19%  Similarity=0.338  Sum_probs=55.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHH-cCCccEEEEccCCc
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAV  258 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v-~~~~~~~~~~~-~~~~d~v~d~~g~~  258 (314)
                      +++|+|.|.+|..+++.+...|..+++++.++++.+++. ..+...++ |..+++.+.++ ...+|.++-++++.
T Consensus         2 ~~iIiG~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~-~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~   75 (134)
T d2hmva1           2 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-SYATHAVIANATEENELLSLGIRNFEYVIVAIGAN   75 (134)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT-TTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH-HhCCcceeeecccchhhhccCCccccEEEEEcCch
Confidence            478889999999999999999999999999999887774 45654433 44445555554 34789988888764

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.89  E-value=0.0015  Score=53.20  Aligned_cols=102  Identities=23%  Similarity=0.250  Sum_probs=69.7

Q ss_pred             hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHHcC---C-cEEe-cCCCHHHHHHHcC
Q 021300          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERLG---A-DSFL-VSRDQDEMQAAMG  246 (314)
Q Consensus       174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~~~g---a-~~~v-~~~~~~~~~~~~~  246 (314)
                      .+.... ++||++||=+|+|+ |..+..+++..|  .+|++++.++...+.+.+...   . ..+. +...++.......
T Consensus        65 ~l~~l~-i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~  142 (227)
T d1g8aa_          65 GLKNFP-IKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVP  142 (227)
T ss_dssp             TCCCCC-CCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCC
T ss_pred             cccccc-cCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCccccccccc
Confidence            344444 79999999999865 778889999875  589999999988776655433   1 1221 2233343333345


Q ss_pred             CccEEEEccCCcc----cHHHHHHhhccCCEEEEE
Q 021300          247 TMDGIIDTVSAVH----PLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       247 ~~d~v~d~~g~~~----~~~~~~~~l~~~G~~v~~  277 (314)
                      .+|+++.......    .+..+.+.|+++|+++.+
T Consensus       143 ~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         143 KVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ceEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence            7898887654332    366778899999998875

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.87  E-value=0.0031  Score=51.67  Aligned_cols=96  Identities=21%  Similarity=0.277  Sum_probs=64.0

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEe-CChhhHHHHH---HHcCCcEE---ecCCCHHHHHH-------HcCCccE
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAI---ERLGADSF---LVSRDQDEMQA-------AMGTMDG  250 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~-~~~~~~~~~~---~~~ga~~~---v~~~~~~~~~~-------~~~~~d~  250 (314)
                      .+||.|+ +++|.+.++.+...|++|++.. ++++..+++.   ++.|.+..   .|-.+++.+.+       ..+++|+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            5677787 9999999999999999998865 4554444443   34454332   24444443332       2357999


Q ss_pred             EEEccCCc-------------------------ccHHHHHHhh--ccCCEEEEEcCCC
Q 021300          251 IIDTVSAV-------------------------HPLMPLIGLL--KSQGKLVLVGAPE  281 (314)
Q Consensus       251 v~d~~g~~-------------------------~~~~~~~~~l--~~~G~~v~~G~~~  281 (314)
                      +++++|..                         ...+.+++.|  +.+|++|.+++..
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~  140 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVV  140 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTH
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChh
Confidence            99998843                         1244566666  4579999998854

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.86  E-value=0.00013  Score=60.00  Aligned_cols=92  Identities=25%  Similarity=0.320  Sum_probs=61.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCC---H-------HHHHHHc--CCccE
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD---Q-------DEMQAAM--GTMDG  250 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~---~-------~~~~~~~--~~~d~  250 (314)
                      +.+|||.|+ +++|.+.++.+...|++|+++++++.+.       .........+   .       +.+....  +.+|+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~   74 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ-------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG   74 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT-------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc-------ccccceeccccCchhHHHHHHHHHHHHhcCCCeeE
Confidence            357899997 9999999999999999999998876432       1112221111   1       1112211  36999


Q ss_pred             EEEccCCc--------------------------ccHHHHHHhhccCCEEEEEcCCCC
Q 021300          251 IIDTVSAV--------------------------HPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       251 v~d~~g~~--------------------------~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      +++++|..                          ......+..|+++|+++.+++...
T Consensus        75 linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~  132 (235)
T d1ooea_          75 VFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA  132 (235)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             EEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHh
Confidence            99998731                          123446677788999999987543

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.82  E-value=0.0048  Score=47.12  Aligned_cols=88  Identities=22%  Similarity=0.136  Sum_probs=60.6

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-CcEEecCCCHHHHHHHcCCccEEEEccCCcc---cH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---PL  261 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-a~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~---~~  261 (314)
                      +|.|+|.|.+|...+..++..|.+|++++++++..+++ ++.+ .+...+..      +.....|+||-++....   .+
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a-~~~~~~~~~~~~~------~~~~~~DiIilavp~~~~~~vl   74 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKA-VERQLVDEAGQDL------SLLQTAKIIFLCTPIQLILPTL   74 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTSCSEEESCG------GGGTTCSEEEECSCHHHHHHHH
T ss_pred             EEEEEeecHHHHHHHHHHHHCCCEEEEEECCchHHHHH-HHhhccceeeeec------ccccccccccccCcHhhhhhhh
Confidence            68899999999998888889999999999998877655 4566 44443221      23457899998886442   23


Q ss_pred             HHHHHhhccCCEEEEEcCC
Q 021300          262 MPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       262 ~~~~~~l~~~G~~v~~G~~  280 (314)
                      +...+.+.++-.++.++..
T Consensus        75 ~~l~~~l~~~~iv~~~~s~   93 (165)
T d2f1ka2          75 EKLIPHLSPTAIVTDVASV   93 (165)
T ss_dssp             HHHGGGSCTTCEEEECCSC
T ss_pred             hhhhhhcccccceeecccc
Confidence            3333444556666666554

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.77  E-value=0.0017  Score=53.16  Aligned_cols=104  Identities=23%  Similarity=0.236  Sum_probs=67.7

Q ss_pred             hhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHH---HHHcCC-c-EEecCCCHHHHHHHcC
Q 021300          172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGA-D-SFLVSRDQDEMQAAMG  246 (314)
Q Consensus       172 ~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~---~~~~ga-~-~~v~~~~~~~~~~~~~  246 (314)
                      +..+.....++||++||=+|+|. |..+..+++..|++++.++.++...+.+   .++.|. + .-+...+.... ...+
T Consensus        22 ~~~l~~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~-~~~~   99 (245)
T d1nkva_          22 YATLGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY-VANE   99 (245)
T ss_dssp             HHHHHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC-CCSS
T ss_pred             HHHHHHHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhc-cccC
Confidence            33455566689999999999865 5667788888899999999998766433   334453 2 11222221111 1234


Q ss_pred             CccEEEEccC------CcccHHHHHHhhccCCEEEEE
Q 021300          247 TMDGIIDTVS------AVHPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       247 ~~d~v~d~~g------~~~~~~~~~~~l~~~G~~v~~  277 (314)
                      .||+|+-.-.      -...+..+.+.|+|||+++..
T Consensus       100 ~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~  136 (245)
T d1nkva_         100 KCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIG  136 (245)
T ss_dssp             CEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEE
T ss_pred             ceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEE
Confidence            6998875321      123577788899999998875

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=96.71  E-value=0.0016  Score=54.25  Aligned_cols=98  Identities=20%  Similarity=0.189  Sum_probs=68.3

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHH---HcCC-c-EEecCCCHHHHHHH-cCCccE
Q 021300          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIE---RLGA-D-SFLVSRDQDEMQAA-MGTMDG  250 (314)
Q Consensus       179 ~~~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~---~~ga-~-~~v~~~~~~~~~~~-~~~~d~  250 (314)
                      ..++||++||=+|+|+ |.++..+|+..+  .+++.++.+++..+.+.+   .+|. + ..+...+..  ... ...+|.
T Consensus        99 l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d~~--~~~~~~~~D~  175 (266)
T d1o54a_          99 LDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDIS--EGFDEKDVDA  175 (266)
T ss_dssp             TTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGG--GCCSCCSEEE
T ss_pred             hCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEecccc--ccccccceee
Confidence            3489999999999876 777888898865  599999999887655533   4453 2 222223211  111 125888


Q ss_pred             EEEccCCc-ccHHHHHHhhccCCEEEEEcC
Q 021300          251 IIDTVSAV-HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       251 v~d~~g~~-~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      |+....++ ..+..+.++|+|||+++.+..
T Consensus       176 V~~d~p~p~~~l~~~~~~LKpGG~lv~~~P  205 (266)
T d1o54a_         176 LFLDVPDPWNYIDKCWEALKGGGRFATVCP  205 (266)
T ss_dssp             EEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred             eEecCCCHHHHHHHHHhhcCCCCEEEEEeC
Confidence            88777664 468999999999999998753

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.69  E-value=0.0035  Score=47.31  Aligned_cols=83  Identities=18%  Similarity=0.285  Sum_probs=58.2

Q ss_pred             EEEEEcCChHHHHHHH-HHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHHH
Q 021300          186 HVGVVGLGGLGHVAVK-FAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~-~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  264 (314)
                      +|.++|+|.+|.+.++ +++..+.+++++++++++.+++.+++|....-+...       ....|+||-++--.. +...
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~-------v~~~Div~lavkP~~-~~~v   73 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPE-------LHSDDVLILAVKPQD-MEAA   73 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCC-------CCTTSEEEECSCHHH-HHHH
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhccccccccccc-------ccccceEEEecCHHH-HHHh
Confidence            5788999999998777 455544799999999999989988888754322111       234788888876433 6666


Q ss_pred             HHhhccCCEEEE
Q 021300          265 IGLLKSQGKLVL  276 (314)
Q Consensus       265 ~~~l~~~G~~v~  276 (314)
                      ++-+++.++++.
T Consensus        74 ~~~l~~~~~~vi   85 (152)
T d1yqga2          74 CKNIRTNGALVL   85 (152)
T ss_dssp             HTTCCCTTCEEE
T ss_pred             HHHHhhcccEEe
Confidence            666666555443

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=96.68  E-value=0.0038  Score=48.62  Aligned_cols=95  Identities=21%  Similarity=0.168  Sum_probs=58.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh----------------------hHHHHHHHcCCcEEecCCCH
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS----------------------KKSEAIERLGADSFLVSRDQ  238 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~----------------------~~~~~~~~~ga~~~v~~~~~  238 (314)
                      ...+.+|+|+|+|+.|+.|+..+...|.+|+++.+.+.                      ...+.++++|.+..++..-.
T Consensus        40 ~~~~k~V~IIGaGPAGL~AA~~la~~G~~Vtl~E~~~~~GG~l~~~~~~p~~~~~~~~~~~~~~~~~~~gV~i~l~~~Vt  119 (179)
T d1ps9a3          40 AVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVT  119 (179)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCC
T ss_pred             CCCCcEEEEECccHHHHHHHHHHHhhccceEEEeccCccCceEEEEEeCcccchHHHHHHHHHHhhhcCCeEEEeCCEEc
Confidence            35568999999999999999999999999999997642                      11222334454433322110


Q ss_pred             HHHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcC
Q 021300          239 DEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       239 ~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                         .+....+|.||-++|... -......+..+.++..+|.
T Consensus       120 ---~~~~~~~d~vilAtG~~~-~~~~~pg~~~g~~v~vigg  156 (179)
T d1ps9a3         120 ---ADQLQAFDETILASGIPN-RALAQPLIDSGKTVHLIGG  156 (179)
T ss_dssp             ---SSSSCCSSEEEECCCEEC-CTTHHHHHTTTCCEEECGG
T ss_pred             ---ccccccceeEEEeecCCC-cccccchhccCCEEEEECC
Confidence               011236788888887543 2223334444556666654

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.0051  Score=50.29  Aligned_cols=48  Identities=19%  Similarity=0.320  Sum_probs=44.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD  230 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~  230 (314)
                      +|.++||.|+ +++|.+.++.+...|++|+++.++.++.+++.++++.+
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence            6889999997 99999999999999999999999999999999988864

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.59  E-value=0.0024  Score=51.69  Aligned_cols=97  Identities=21%  Similarity=0.085  Sum_probs=65.5

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe------------cC---------CC-H
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL------------VS---------RD-Q  238 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v------------~~---------~~-~  238 (314)
                      +++|.+||.+|+|. |..+..+++ .|++|+.++-++...+.+.++.+.....            ..         .+ .
T Consensus        43 ~~~~~rvLd~GCG~-G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~  120 (229)
T d2bzga1          43 GKSGLRVFFPLCGK-AVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIF  120 (229)
T ss_dssp             TCCSCEEEETTCTT-CTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGG
T ss_pred             CCCCCEEEEeCCCC-cHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchh
Confidence            58899999999875 777777776 6999999999998887776665532211            00         01 0


Q ss_pred             HHHHHHcCCccEEEEccCCc--------ccHHHHHHhhccCCEEEEEcC
Q 021300          239 DEMQAAMGTMDGIIDTVSAV--------HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       239 ~~~~~~~~~~d~v~d~~g~~--------~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      +......+.+|+|+++..-.        ..+..+.++|+|+|++++...
T Consensus       121 ~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~  169 (229)
T d2bzga1         121 DLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVL  169 (229)
T ss_dssp             GGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             hccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEc
Confidence            11112234689999875421        235678999999999776643

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=96.58  E-value=0.025  Score=42.35  Aligned_cols=93  Identities=16%  Similarity=0.281  Sum_probs=68.0

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHC--CCeEEEEe--CChhhHHHHHHHcCCcEEecCCCH--HHH----------------
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAM--GVKVTVIS--TSPSKKSEAIERLGADSFLVSRDQ--DEM----------------  241 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~--g~~vi~v~--~~~~~~~~~~~~~ga~~~v~~~~~--~~~----------------  241 (314)
                      .+|.|+|+ |++|..+..+.+..  ..+++.++  ++-+...+.+++|..+.++..++.  +.+                
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~~   82 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGAD   82 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESHH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCcc
Confidence            68999999 99999999999986  35666554  455667788889988776554432  111                


Q ss_pred             --HHH-cCCccEEEEccCCcccHHHHHHhhccCCEEEEE
Q 021300          242 --QAA-MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       242 --~~~-~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~  277 (314)
                        .++ ...+|+++.++.+..++...+.+++.+-++.+.
T Consensus        83 ~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaLA  121 (150)
T d1r0ka2          83 ALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALA  121 (150)
T ss_dssp             HHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEEC
T ss_pred             chheecccccceeeeecCchhHHHHHHHHHhcCCEEEEe
Confidence              111 125899999987777899999999888765543

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.57  E-value=0.0028  Score=53.02  Aligned_cols=104  Identities=16%  Similarity=0.192  Sum_probs=66.9

Q ss_pred             hHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCc--EEecCCCHHHHHHHcCCcc
Q 021300          175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGAD--SFLVSRDQDEMQAAMGTMD  249 (314)
Q Consensus       175 l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~ga~--~~v~~~~~~~~~~~~~~~d  249 (314)
                      +.....+.+|++||=+|+|. |..+..+++..|++|+.++.++...+.+.+   ..|..  .-+...+...+..-.+.||
T Consensus        59 l~~~~~l~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~~~~sfD  137 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGAGY-GGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYD  137 (282)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEE
T ss_pred             HHHhcCCCCCCEEEEeCCCC-cHHHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            34455689999999999874 667788888789999999999876544433   33421  1122222211111124699


Q ss_pred             EEEEccC-----C-cccHHHHHHhhccCCEEEEEcC
Q 021300          250 GIIDTVS-----A-VHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       250 ~v~d~~g-----~-~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      +|+-.-.     + ...+..+.++|+|||++++...
T Consensus       138 ~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~~  173 (282)
T d2o57a1         138 FIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP  173 (282)
T ss_dssp             EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             hhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEEe
Confidence            9875322     1 1247788899999999888643

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.55  E-value=0.0035  Score=52.81  Aligned_cols=97  Identities=14%  Similarity=0.141  Sum_probs=65.5

Q ss_pred             hcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHH---HHHcCCc-E-EecCCCHHHHHHHcCCccEE
Q 021300          177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGAD-S-FLVSRDQDEMQAAMGTMDGI  251 (314)
Q Consensus       177 ~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~---~~~~ga~-~-~v~~~~~~~~~~~~~~~d~v  251 (314)
                      ....+++|++||=+|+|- |..+..+|+..|++++.++.++++....   .++.|.. . -+...+.   ....+.||.|
T Consensus        55 ~~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d~---~~~~~~fD~i  130 (291)
T d1kpia_          55 DKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGW---EEFDEPVDRI  130 (291)
T ss_dssp             HTTCCCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECCG---GGCCCCCSEE
T ss_pred             HhcCCCCCCEEEEecCcc-hHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhhcc---cccccccceE
Confidence            344589999999999864 4467888888999999999998865433   3344532 1 1222221   1234579987


Q ss_pred             EE-----ccCCc----------ccHHHHHHhhccCCEEEEE
Q 021300          252 ID-----TVSAV----------HPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       252 ~d-----~~g~~----------~~~~~~~~~l~~~G~~v~~  277 (314)
                      +.     .+++.          ..+..+.++|+|||++++-
T Consensus       131 ~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~  171 (291)
T d1kpia_         131 VSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLH  171 (291)
T ss_dssp             EEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEE
T ss_pred             eechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEE
Confidence            64     34431          3478899999999998864

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.52  E-value=0.02  Score=43.99  Aligned_cols=97  Identities=18%  Similarity=0.214  Sum_probs=66.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHCC-CeEEEEeC-ChhhHHHHHHHcCCcEEecCCCH-HH-----------HHHHcCCccEE
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMG-VKVTVIST-SPSKKSEAIERLGADSFLVSRDQ-DE-----------MQAAMGTMDGI  251 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~-~~~~~~~~~~~~ga~~~v~~~~~-~~-----------~~~~~~~~d~v  251 (314)
                      +|.|.|-|.+|....+.+.... .+++.+.+ .+......+.+++.+......+. ..           +.+...++|+|
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDvV   83 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDII   83 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccCCEE
Confidence            6889999999999888877654 47765553 33333344456676554322221 11           12223479999


Q ss_pred             EEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300          252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       252 ~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      +||+|.-.+.+.+-..+..|-+.|+.+.++.
T Consensus        84 iEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~~  114 (172)
T d2czca2          84 VDATPGGIGAKNKPLYEKAGVKAIFQGGEKA  114 (172)
T ss_dssp             EECCSTTHHHHHHHHHHHHTCEEEECTTSCG
T ss_pred             EECCCCCCCHHHHHHHHHcCCCEEEECCCCc
Confidence            9999987777888889999999999988654

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.46  E-value=0.0044  Score=51.38  Aligned_cols=101  Identities=24%  Similarity=0.273  Sum_probs=67.7

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHHc----C--C-cEEecCCCHHHHHHHcCCc
Q 021300          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERL----G--A-DSFLVSRDQDEMQAAMGTM  248 (314)
Q Consensus       178 ~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~~~----g--a-~~~v~~~~~~~~~~~~~~~  248 (314)
                      ..+++||++||=.|+|+ |.++..+|+..|  .+++.++.+++..+.+.+.+    +  . ...+...+......-.+.|
T Consensus        91 ~l~i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d~~~~~~~~~~f  169 (264)
T d1i9ga_          91 EGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSV  169 (264)
T ss_dssp             HTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCE
T ss_pred             HhCCCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEecccccccccCCCc
Confidence            34489999999888865 778888999875  48999999988765554322    1  1 2222233321111112469


Q ss_pred             cEEEEccCCc-ccHHHHHHhhccCCEEEEEcC
Q 021300          249 DGIIDTVSAV-HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       249 d~v~d~~g~~-~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      |.||-...++ ..+..+.+.|+++|+++.+-.
T Consensus       170 DaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~P  201 (264)
T d1i9ga_         170 DRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA  201 (264)
T ss_dssp             EEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             ceEEEecCCHHHHHHHHHhccCCCCEEEEEeC
Confidence            9877666543 458889999999999988754

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.46  E-value=0.0013  Score=53.51  Aligned_cols=99  Identities=17%  Similarity=0.180  Sum_probs=63.2

Q ss_pred             hcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc-EEecCCCHHHHHHHcCCccEEE
Q 021300          177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD-SFLVSRDQDEMQAAMGTMDGII  252 (314)
Q Consensus       177 ~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~-~~v~~~~~~~~~~~~~~~d~v~  252 (314)
                      ...+++||++||=+|+|. |..+..+++. +++++.++.++...+.+.+.   .+.+ .-+...+........+.||+|+
T Consensus        10 ~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~   87 (234)
T d1xxla_          10 KTAECRAEHRVLDIGAGA-GHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIIT   87 (234)
T ss_dssp             HHHTCCTTCEEEEESCTT-SHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEE
T ss_pred             HHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CCeEEEEeCChhhhhhhhhhhcccccccccccccccccccccccccceee
Confidence            445589999999999865 6777777764 68999999998766554333   3332 1111111111111124699888


Q ss_pred             EccCC------cccHHHHHHhhccCCEEEEE
Q 021300          253 DTVSA------VHPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       253 d~~g~------~~~~~~~~~~l~~~G~~v~~  277 (314)
                      -.-.-      ...+..+.+.|+|+|+++..
T Consensus        88 ~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~  118 (234)
T d1xxla_          88 CRYAAHHFSDVRKAVREVARVLKQDGRFLLV  118 (234)
T ss_dssp             EESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eeceeecccCHHHHHHHHHHeeCCCcEEEEE
Confidence            64332      12477888999999998875

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.41  E-value=0.0081  Score=46.91  Aligned_cols=109  Identities=18%  Similarity=0.143  Sum_probs=70.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCC-cc-
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA-VH-  259 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~-~~-  259 (314)
                      -.|.++.|+|.|.+|...+++++.+|.+|+.+++.......  ...+...    .   .+.++....|+|+-+..- .. 
T Consensus        42 l~~k~vgiiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~--~~~~~~~----~---~l~ell~~sDiv~~~~Plt~~T  112 (184)
T d1ygya1          42 IFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARA--AQLGIEL----L---SLDDLLARADFISVHLPKTPET  112 (184)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCHHHH--HHHTCEE----C---CHHHHHHHCSEEEECCCCSTTT
T ss_pred             ccceeeeeccccchhHHHHHHhhhccceEEeecCCCChhHH--hhcCcee----c---cHHHHHhhCCEEEEcCCCCchh
Confidence            46789999999999999999999999999998876543322  2334322    1   123344457888776642 11 


Q ss_pred             ---cHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300          260 ---PLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW  300 (314)
Q Consensus       260 ---~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~  300 (314)
                         .-...++.|+++..+|-+|..+ -++-....-..+..++.+
T Consensus       113 ~~lin~~~l~~mk~~a~lIN~sRG~-iVde~aL~~aL~~~~i~~  155 (184)
T d1ygya1         113 AGLIDKEALAKTKPGVIIVNAARGG-LVDEAALADAITGGHVRA  155 (184)
T ss_dssp             TTCBCHHHHTTSCTTEEEEECSCTT-SBCHHHHHHHHHTSSEEE
T ss_pred             hhhhhHHHHhhhCCCceEEEecchh-hhhhHHHHHHHhcCcEeE
Confidence               2346788888888888888742 233333333334444443

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.35  E-value=0.0042  Score=49.01  Aligned_cols=91  Identities=21%  Similarity=0.206  Sum_probs=60.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCC-cc-
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA-VH-  259 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~-~~-  259 (314)
                      -.|.++.|+|.|.+|...+++++.+|++|+.+++.....  ..+..+....   .   .+.++....|+|+-+..- .. 
T Consensus        47 L~gktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~--~~~~~~~~~~---~---~l~~ll~~sD~i~~~~plt~~T  118 (193)
T d1mx3a1          47 IRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDG--VERALGLQRV---S---TLQDLLFHSDCVTLHCGLNEHN  118 (193)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTT--HHHHHTCEEC---S---SHHHHHHHCSEEEECCCCCTTC
T ss_pred             eeCceEEEeccccccccceeeeeccccceeeccCccccc--chhhhccccc---c---chhhccccCCEEEEeecccccc
Confidence            468899999999999999999999999999988764432  1223343321   1   122333346777666542 11 


Q ss_pred             ---cHHHHHHhhccCCEEEEEcCC
Q 021300          260 ---PLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       260 ---~~~~~~~~l~~~G~~v~~G~~  280 (314)
                         .-...++.|+++..+|.++..
T Consensus       119 ~~li~~~~l~~mk~~a~lIN~sRG  142 (193)
T d1mx3a1         119 HHLINDFTVKQMRQGAFLVNTARG  142 (193)
T ss_dssp             TTSBSHHHHTTSCTTEEEEECSCT
T ss_pred             hhhhhHHHHhccCCCCeEEecCCc
Confidence               134567788888888888773

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.34  E-value=0.0069  Score=49.87  Aligned_cols=45  Identities=20%  Similarity=0.146  Sum_probs=34.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHH-HH--CCCeEEEEeCChhhHHHHHHHc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFA-KA--MGVKVTVISTSPSKKSEAIERL  227 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a-~~--~g~~vi~v~~~~~~~~~~~~~~  227 (314)
                      .|..+||.|+ +++|.+.++.+ +.  .|++|+++.+++++.+++.+++
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l   53 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEEL   53 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHH
Confidence            4566777787 99999877655 42  5899999999998887776654

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.25  E-value=0.011  Score=47.83  Aligned_cols=101  Identities=17%  Similarity=0.151  Sum_probs=65.0

Q ss_pred             hHhcCCCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcC---C-cEEe-cCCCHHHHHHHcCCc
Q 021300          175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLG---A-DSFL-VSRDQDEMQAAMGTM  248 (314)
Q Consensus       175 l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~g---a-~~~v-~~~~~~~~~~~~~~~  248 (314)
                      +.... ++||++||=+|+|. |..+..+++.. +..|++++.+++..+.+.+...   . ..+. +...++........+
T Consensus        67 l~~l~-ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v  144 (230)
T d1g8sa_          67 LKVMP-IKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKV  144 (230)
T ss_dssp             CCCCC-CCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCE
T ss_pred             HHhCC-CCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCccccccccee
Confidence            44444 79999999999865 77778888865 3599999999988776655432   1 2222 222233222223346


Q ss_pred             cEEEEccCCcc----cHHHHHHhhccCCEEEEE
Q 021300          249 DGIIDTVSAVH----PLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       249 d~v~d~~g~~~----~~~~~~~~l~~~G~~v~~  277 (314)
                      |+++.......    .+..+.+.|+++|+++++
T Consensus       145 ~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~  177 (230)
T d1g8sa_         145 DVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEeeccccchHHHHHHHHHHHHhcccCceEEEE
Confidence            66666554322    366678889999998876

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.21  E-value=0.013  Score=44.63  Aligned_cols=96  Identities=18%  Similarity=0.150  Sum_probs=71.5

Q ss_pred             cccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 021300          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (314)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~  240 (314)
                      ..+||+.......|++...--.|.+++|+|. ..+|.-...++...|++|++.-.......+..                
T Consensus        15 ~~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~~----------------   78 (166)
T d1b0aa1          15 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHV----------------   78 (166)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHH----------------
T ss_pred             CCCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHHH----------------
Confidence            4678888888888887776678999999997 77999999999999999987765544333332                


Q ss_pred             HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCC
Q 021300          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       241 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                           ..+|+++-++|.+..+.  -+.++++-.++.+|..
T Consensus        79 -----~~ADivI~a~G~p~~i~--~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          79 -----ENADLLIVAVGKPGFIP--GDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             -----HHCSEEEECSCCTTCBC--TTTSCTTCEEEECCCE
T ss_pred             -----hhhhHhhhhccCccccc--ccccCCCcEEEecCce
Confidence                 23778888888765332  3467788888888864

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.21  E-value=0.0052  Score=49.10  Aligned_cols=98  Identities=13%  Similarity=0.093  Sum_probs=63.6

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHH---cCC-cEEe-cCCCHHHHHHHcCCccEEEE
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIER---LGA-DSFL-VSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~---~ga-~~~v-~~~~~~~~~~~~~~~d~v~d  253 (314)
                      .++||++||=+|+|. |..+..+++..+ .+|+.++-+++..+.+.+.   .+. ..++ +...+.........+|+++.
T Consensus        53 ~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~v~~  131 (209)
T d1nt2a_          53 KLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQ  131 (209)
T ss_dssp             CCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEE
T ss_pred             CCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccccccceEEEEEe
Confidence            379999999999865 667778888765 4899999998876555433   332 2222 11222222222335787876


Q ss_pred             ccCCcc----cHHHHHHhhccCCEEEEEc
Q 021300          254 TVSAVH----PLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       254 ~~g~~~----~~~~~~~~l~~~G~~v~~G  278 (314)
                      ......    .+..+.+.|+++|+++.+-
T Consensus       132 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  160 (209)
T d1nt2a_         132 DIAQKNQIEILKANAEFFLKEKGEVVIMV  160 (209)
T ss_dssp             CCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccChhhHHHHHHHHHHHhccCCeEEEEE
Confidence            554322    3666788999999998763

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.20  E-value=0.0064  Score=43.35  Aligned_cols=85  Identities=16%  Similarity=0.221  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHHcC--CccEEEEccCCcc
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMG--TMDGIIDTVSAVH  259 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~~~--~~d~v~d~~g~~~  259 (314)
                      .+.+|.|+|+|.+|++.++-++.+|.++++++.++..-.   .+.....+ .++.+.+.+.+...  ..|++-=  -.+.
T Consensus        10 ~~~kigIlGgGQL~rMla~aA~~lG~~v~v~d~~~~~PA---~~va~~~i~~~~~d~~~l~~~~~~~~~DviT~--E~En   84 (111)
T d1kjqa2          10 AATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAPA---MHVAHRSHVINMLDGDALRRVVELEKPHYIVP--EIEA   84 (111)
T ss_dssp             TCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTCGG---GGGSSEEEECCTTCHHHHHHHHHHHCCSEEEE--CSSC
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCCCCCch---hhcCCeEEECCCCCHHHHHHHHHhhCCceEEE--EecC
Confidence            345699999999999999999999999999998765321   12333333 35677777776653  6788732  1222


Q ss_pred             cHHHHHHhhccCC
Q 021300          260 PLMPLIGLLKSQG  272 (314)
Q Consensus       260 ~~~~~~~~l~~~G  272 (314)
                      .-..+++.|...|
T Consensus        85 I~~~~L~~le~~g   97 (111)
T d1kjqa2          85 IATDMLIQLEEEG   97 (111)
T ss_dssp             SCHHHHHHHHHTT
T ss_pred             cCHHHHHHHHHCC
Confidence            2234555554444

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.19  E-value=0.0055  Score=50.21  Aligned_cols=74  Identities=15%  Similarity=0.133  Sum_probs=51.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHH----H---cC--Cc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQA----A---MG--TM  248 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~----~---~~--~~  248 (314)
                      ..+|||.|+ +++|.+.++.+...|+  +|+...|+.++.+++.+..+....   .|-.+.+.+.+    +   .+  ..
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            368899887 9999999988888886  688888998888777655554322   24444432222    1   12  49


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |++++++|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999999983

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.15  E-value=0.013  Score=48.47  Aligned_cols=75  Identities=15%  Similarity=0.218  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCChh---hHHHHHHHcCCcEE--ecCCCHH-------HHHHHcCC
Q 021300          183 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGADSF--LVSRDQD-------EMQAAMGT  247 (314)
Q Consensus       183 ~g~~vlI~Ga-g--~vG~~a~~~a~~~g~~vi~v~~~~~---~~~~~~~~~ga~~~--v~~~~~~-------~~~~~~~~  247 (314)
                      +|.++||.|+ |  ++|.+.++.+...|++|+++.++++   +.+++.++.+...+  .+-.+.+       .+.+..+.
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~   83 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   83 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCC
Confidence            5899999986 5  6999999999999999999998863   34444444443222  2333332       22233457


Q ss_pred             ccEEEEccCC
Q 021300          248 MDGIIDTVSA  257 (314)
Q Consensus       248 ~d~v~d~~g~  257 (314)
                      +|+++.+.|.
T Consensus        84 id~lV~nag~   93 (274)
T d2pd4a1          84 LDFIVHSVAF   93 (274)
T ss_dssp             EEEEEECCCC
T ss_pred             CCeEEeeccc
Confidence            9999998873

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.12  E-value=0.014  Score=48.78  Aligned_cols=99  Identities=18%  Similarity=0.188  Sum_probs=60.4

Q ss_pred             EEEEcC-ChHHHHHHHHHHHCCCeEEEE---eCChh---hHHHHHHHcC---CcE---EecCCCHHHHHHH-----cCCc
Q 021300          187 VGVVGL-GGLGHVAVKFAKAMGVKVTVI---STSPS---KKSEAIERLG---ADS---FLVSRDQDEMQAA-----MGTM  248 (314)
Q Consensus       187 vlI~Ga-g~vG~~a~~~a~~~g~~vi~v---~~~~~---~~~~~~~~~g---a~~---~v~~~~~~~~~~~-----~~~~  248 (314)
                      +||.|+ +++|.+.+..+...|++++.+   .++.+   +..+..+++.   .+.   ..|-.+++.+.++     .+..
T Consensus         5 vlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~i   84 (285)
T d1jtva_           5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRV   84 (285)
T ss_dssp             EEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSCC
T ss_pred             EEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccch
Confidence            456687 999999999998899875544   33332   3344444443   222   2355555544433     2369


Q ss_pred             cEEEEccCCc-------------------------ccHHHHHHhhc--cCCEEEEEcCCCCCcc
Q 021300          249 DGIIDTVSAV-------------------------HPLMPLIGLLK--SQGKLVLVGAPEKPLE  285 (314)
Q Consensus       249 d~v~d~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~G~~~~~~~  285 (314)
                      |+++++.|..                         ...+.++..|+  .+|++|.+++..+...
T Consensus        85 dilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~  148 (285)
T d1jtva_          85 DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG  148 (285)
T ss_dssp             SEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC
T ss_pred             hhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCC
Confidence            9999998732                         12344556663  3699999987644333

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.10  E-value=0.028  Score=42.72  Aligned_cols=92  Identities=21%  Similarity=0.153  Sum_probs=62.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHcCC-cEEecCCCHHHHHHHcCCccEEEEccCCcc---
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGA-DSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~ga-~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~---  259 (314)
                      +|+|+|.|.+|...+..++..|.  ++++++++++..+.+ ++.+. +......+.    ......|+++-|+....   
T Consensus         3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a-~~~~~~~~~~~~~~~----~~~~~~dlIila~p~~~~~~   77 (171)
T d2g5ca2           3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA-VDLGIIDEGTTSIAK----VEDFSPDFVMLSSPVRTFRE   77 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH-HHTTSCSEEESCGGG----GGGTCCSEEEECSCHHHHHH
T ss_pred             EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHH-HHhhcchhhhhhhhh----hhccccccccccCCchhhhh
Confidence            68999999999999988888875  788899998877665 45664 554332221    12235788888877443   


Q ss_pred             cHHHHHHhhccCCEEEEEcCCCC
Q 021300          260 PLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       260 ~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      .+....+.+.++-.++.++....
T Consensus        78 vl~~l~~~~~~~~ii~d~~s~k~  100 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGSVKG  100 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCSCCT
T ss_pred             hhhhhhccccccccccccccccH
Confidence            23445556667777777777544

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.03  E-value=0.0064  Score=48.40  Aligned_cols=94  Identities=22%  Similarity=0.211  Sum_probs=60.6

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCC-cEEecCCCHHHHHHHcCCccEEEEccC
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGA-DSFLVSRDQDEMQAAMGTMDGIIDTVS  256 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga-~~~v~~~~~~~~~~~~~~~d~v~d~~g  256 (314)
                      ++++++||=+|+|. |..+..+++ .|.+++.++.++...+.+.+.   .+. ...+.. +...+....+.||+|+-.-.
T Consensus        35 l~~~~~ILDiGcG~-G~~~~~la~-~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~-d~~~l~~~~~~fD~I~~~~~  111 (226)
T d1ve3a1          35 MKKRGKVLDLACGV-GGFSFLLED-YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVG-DARKLSFEDKTFDYVIFIDS  111 (226)
T ss_dssp             CCSCCEEEEETCTT-SHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEEC-CTTSCCSCTTCEEEEEEESC
T ss_pred             cCCCCEEEEECCCc-chhhhhHhh-hhcccccccccccchhhhhhhhcccccccccccc-ccccccccCcCceEEEEecc
Confidence            57889999999875 777777776 488999999998876555432   232 222222 21111112246998876433


Q ss_pred             Cc--------ccHHHHHHhhccCCEEEEE
Q 021300          257 AV--------HPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       257 ~~--------~~~~~~~~~l~~~G~~v~~  277 (314)
                      -.        ..+..+.+.|+|||++++.
T Consensus       112 l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         112 IVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             GGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            11        1366788899999998765

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.01  E-value=0.0075  Score=48.03  Aligned_cols=71  Identities=25%  Similarity=0.187  Sum_probs=51.7

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHHcCCccEEEEccCC
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      .+|||.|+ |.+|...+..+...|.  .++.+.+++++...+.  -+.+.+ .|..+.+...+...++|.|+.+++.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   78 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDADSINPAFQGIDALVILTSA   78 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhcc--CCcEEEEeeeccccccccccccceeeEEEEee
Confidence            58999997 9999999999988885  5666778776554331  233332 3556677777778899999998763

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=96.00  E-value=0.019  Score=46.79  Aligned_cols=76  Identities=16%  Similarity=0.257  Sum_probs=49.0

Q ss_pred             CCCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCChhhHH---HHHHHcCCcEEe--cCCCHHHHH----HH---cC
Q 021300          182 KPGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSKKS---EAIERLGADSFL--VSRDQDEMQ----AA---MG  246 (314)
Q Consensus       182 ~~g~~vlI~Ga-g--~vG~~a~~~a~~~g~~vi~v~~~~~~~~---~~~~~~ga~~~v--~~~~~~~~~----~~---~~  246 (314)
                      -.|+++||.|+ |  ++|.+.+..+...|++|++..++++..+   ++.+..+....+  +..+.....    ..   .+
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            46899999987 5  6889999999999999999998865433   333344433222  222222211    11   23


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      ..|+.+++++.
T Consensus        83 ~~d~~v~~a~~   93 (258)
T d1qsga_          83 KFDGFVHSIGF   93 (258)
T ss_dssp             SEEEEEECCCC
T ss_pred             ccceEEEeecc
Confidence            68999988753

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.00  E-value=0.028  Score=43.53  Aligned_cols=98  Identities=22%  Similarity=0.212  Sum_probs=63.1

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCC-cEE-ecCCCHHHHHHHcCCccEEEEc
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGA-DSF-LVSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~ga-~~~-v~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      .+++|++||=+|+|. |..++.+++. +.+|+.++.+++..+.+.+   ++|. +.+ +...+..........||.++-.
T Consensus        30 ~~~~g~~VLDiGcGs-G~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~~~~~~~~~D~v~~~  107 (186)
T d1l3ia_          30 EPGKNDVAVDVGCGT-GGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVG  107 (186)
T ss_dssp             CCCTTCEEEEESCTT-SHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEES
T ss_pred             CCCCCCEEEEEECCe-Eccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhhcccccCCcCEEEEe
Confidence            379999999888754 4555666654 5699999999886655533   4553 222 2223332222223579998865


Q ss_pred             cCCc---ccHHHHHHhhccCCEEEEEcC
Q 021300          255 VSAV---HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       255 ~g~~---~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      ....   ..+..+.+.|+++|+++....
T Consensus       108 ~~~~~~~~~~~~~~~~LkpgG~lvi~~~  135 (186)
T d1l3ia_         108 GSGGELQEILRIIKDKLKPGGRIIVTAI  135 (186)
T ss_dssp             CCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             CccccchHHHHHHHHHhCcCCEEEEEee
Confidence            4432   236677888999999987754

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.98  E-value=0.009  Score=47.17  Aligned_cols=88  Identities=24%  Similarity=0.221  Sum_probs=61.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc-c--
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV-H--  259 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~-~--  259 (314)
                      .|.+|.|+|.|.+|...+++++.+|++|+++++.......   ..+..    ..   .+.++....|+++-+..-. .  
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~---~~~~~----~~---~l~~~l~~sDii~~~~plt~~T~  111 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPELE---KKGYY----VD---SLDDLYKQADVISLHVPDVPANV  111 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH---HTTCB----CS---CHHHHHHHCSEEEECSCCCGGGT
T ss_pred             cCCeEEEecccccchhHHHhHhhhcccccccCcccccccc---cceee----ec---cccccccccccccccCCcccccc
Confidence            5899999999999999999999999999998866443211   11221    11   1233444578888776421 1  


Q ss_pred             --cHHHHHHhhccCCEEEEEcCC
Q 021300          260 --PLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       260 --~~~~~~~~l~~~G~~v~~G~~  280 (314)
                        .-...++.|+++..+|-++..
T Consensus       112 ~li~~~~l~~mk~~a~lIN~sRG  134 (197)
T d1j4aa1         112 HMINDESIAKMKQDVVIVNVSRG  134 (197)
T ss_dssp             TCBSHHHHHHSCTTEEEEECSCG
T ss_pred             ccccHHHHhhhCCccEEEecCch
Confidence              235678889999888888773

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=95.96  E-value=0.0042  Score=49.92  Aligned_cols=96  Identities=23%  Similarity=0.176  Sum_probs=62.6

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHH---HHcCCc--EEecCCCHHHHHHHcCCccEEEE
Q 021300          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI---ERLGAD--SFLVSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       179 ~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~---~~~ga~--~~v~~~~~~~~~~~~~~~d~v~d  253 (314)
                      .+++++++||=+|+| .|..+..+++. |++++.++.+++..+.+.   ++.+.+  .++..+..+ +....+.||+|+-
T Consensus        11 ~~l~~~~rVLDiGcG-~G~~~~~l~~~-~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~-l~~~~~~fD~v~~   87 (231)
T d1vl5a_          11 AALKGNEEVLDVATG-GGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ-MPFTDERFHIVTC   87 (231)
T ss_dssp             HTCCSCCEEEEETCT-TCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-C-CCSCTTCEEEEEE
T ss_pred             cCCCCcCEEEEeccc-CcHHHHHHHHh-CCEEEEEECCHHHHhhhhhccccccccccccccccccc-ccccccccccccc
Confidence            448999999999986 47677777654 789999999987665443   234433  222222211 1112346999875


Q ss_pred             ccC-----Cc-ccHHHHHHhhccCCEEEEE
Q 021300          254 TVS-----AV-HPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       254 ~~g-----~~-~~~~~~~~~l~~~G~~v~~  277 (314)
                      .-.     +. ..+..+.++|+|||+++..
T Consensus        88 ~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~  117 (231)
T d1vl5a_          88 RIAAHHFPNPASFVSEAYRVLKKGGQLLLV  117 (231)
T ss_dssp             ESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccccccCCHHHHHHHHHHhcCCCcEEEEE
Confidence            433     11 2478899999999999886

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.96  E-value=0.019  Score=45.32  Aligned_cols=96  Identities=21%  Similarity=0.223  Sum_probs=65.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~  261 (314)
                      -.|.+|+|.|.|.+|..+++++...|+++++.+.+.++.... ..+|++.+ ..++     .+...+|+.+=|......-
T Consensus        25 L~gk~v~IqG~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~-~~~g~~~~-~~~~-----~~~~~~DI~iPcA~~~~I~   97 (201)
T d1c1da1          25 LDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHA-VALGHTAV-ALED-----VLSTPCDVFAPCAMGGVIT   97 (201)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEEC-CGGG-----GGGCCCSEEEECSCSCCBC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEecchHHHHHHH-Hhhccccc-Cccc-----cccccceeeeccccccccc
Confidence            478999999999999999999999999999998888777555 46776543 2111     2344789888776544334


Q ss_pred             HHHHHhhccCCEEEEEcCCCCCcccc
Q 021300          262 MPLIGLLKSQGKLVLVGAPEKPLELP  287 (314)
Q Consensus       262 ~~~~~~l~~~G~~v~~G~~~~~~~~~  287 (314)
                      ....+.++  .+++ ++....+..-+
T Consensus        98 ~~~a~~i~--ak~i-~e~AN~p~~~~  120 (201)
T d1c1da1          98 TEVARTLD--CSVV-AGAANNVIADE  120 (201)
T ss_dssp             HHHHHHCC--CSEE-CCSCTTCBCSH
T ss_pred             HHHHhhhh--hhee-eccCCCCcchh
Confidence            45555553  4454 44434444433

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.95  E-value=0.0073  Score=48.79  Aligned_cols=95  Identities=21%  Similarity=0.141  Sum_probs=62.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC---CcEEecCCCHHH-HHHHc-CCccEEE-Ecc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---ADSFLVSRDQDE-MQAAM-GTMDGII-DTV  255 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g---a~~~v~~~~~~~-~~~~~-~~~d~v~-d~~  255 (314)
                      .+|.+||-+|+|. |..+..+++..+.++++++.++...+.+.+...   ....+...+... ...+. +.||.++ |.+
T Consensus        52 ~~g~~VLdIGcG~-G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~fD~~  130 (229)
T d1zx0a1          52 SKGGRVLEVGFGM-AIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY  130 (229)
T ss_dssp             TTCEEEEEECCTT-SHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred             cCCCeEEEeeccc-hHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccccccccccccccccccceeeccc
Confidence            6889999999864 677888888766799999999887766655443   222222233222 22222 3688874 654


Q ss_pred             CCcc----------cHHHHHHhhccCCEEEEE
Q 021300          256 SAVH----------PLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       256 g~~~----------~~~~~~~~l~~~G~~v~~  277 (314)
                      ....          .+..+.+.|+|||+++..
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         131 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             ccccccccccCHHHHHHHHHHHcCCCcEEEEE
Confidence            3221          345678899999999875

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.94  E-value=0.011  Score=50.38  Aligned_cols=102  Identities=20%  Similarity=0.222  Sum_probs=64.6

Q ss_pred             hHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHcC--------------CcEE-ecCCC
Q 021300          175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLG--------------ADSF-LVSRD  237 (314)
Q Consensus       175 l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~g--------------a~~~-v~~~~  237 (314)
                      +.... ++||++||=.|+|+ |.++..+|+..|.  +|+.++.+++..+.+.+.+.              .+.+ +...+
T Consensus        91 l~~l~-i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~d  168 (324)
T d2b25a1          91 LSMMD-INPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  168 (324)
T ss_dssp             HHHHT-CCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHhC-CCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecc
Confidence            44444 89999999888865 8888999998764  89999999877655433221              1111 11122


Q ss_pred             H-HHHHHH-cCCccEEEEccCCc-ccHHHHHHhhccCCEEEEEc
Q 021300          238 Q-DEMQAA-MGTMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       238 ~-~~~~~~-~~~~d~v~d~~g~~-~~~~~~~~~l~~~G~~v~~G  278 (314)
                      . +..... ...||.||--...+ ..+..+.+.|++||+++.+-
T Consensus       169 i~~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~  212 (324)
T d2b25a1         169 ISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  212 (324)
T ss_dssp             TTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             hhhcccccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence            1 111112 23588877544432 35889999999999999874

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.93  E-value=0.011  Score=46.48  Aligned_cols=90  Identities=13%  Similarity=0.157  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCC-cc--
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA-VH--  259 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~-~~--  259 (314)
                      .|.++.|+|.|.+|...+++++.+|.+++.+++......... ..+...   ..   .+.++....|+|+.+..- +.  
T Consensus        46 ~g~tvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-~~~~~~---~~---~l~~ll~~sD~v~l~~plt~~T~  118 (191)
T d1gdha1          46 DNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEA-SYQATF---HD---SLDSLLSVSQFFSLNAPSTPETR  118 (191)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHH-HHTCEE---CS---SHHHHHHHCSEEEECCCCCTTTT
T ss_pred             cccceEEeecccchHHHHHHHHhhccccccccccccccchhh-cccccc---cC---CHHHHHhhCCeEEecCCCCchHh
Confidence            489999999999999999999999999999887654332222 222211   11   122334457787766532 11  


Q ss_pred             --cHHHHHHhhccCCEEEEEcC
Q 021300          260 --PLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       260 --~~~~~~~~l~~~G~~v~~G~  279 (314)
                        .-...++.|+++..+|-++.
T Consensus       119 ~li~~~~l~~mk~~a~lIN~sR  140 (191)
T d1gdha1         119 YFFNKATIKSLPQGAIVVNTAR  140 (191)
T ss_dssp             TCBSHHHHTTSCTTEEEEECSC
T ss_pred             heecHHHhhCcCCccEEEecCC
Confidence              23467778888888888876

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=95.89  E-value=0.008  Score=46.15  Aligned_cols=97  Identities=15%  Similarity=0.302  Sum_probs=66.3

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh---hhHHHHHHHc---C---Cc------E---------EecCCCHHHH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERL---G---AD------S---------FLVSRDQDEM  241 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~---~~~~~~~~~~---g---a~------~---------~v~~~~~~~~  241 (314)
                      +|.|.|-|.+|+++.+.+...+.+++.+-+..   +....+.+.-   |   .+      .         +....+++.+
T Consensus         2 kIgINGfGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~i   81 (169)
T d1dssg1           2 KIGINGFGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPENI   81 (169)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGGC
T ss_pred             eEEEECCcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHHC
Confidence            57888999999999998888888888776532   3344444311   1   11      1         1122333444


Q ss_pred             HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      .+...++|+|+||+|.-.....+...+..+-+-|++..+..
T Consensus        82 ~W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~~  122 (169)
T d1dssg1          82 PWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSA  122 (169)
T ss_dssp             CHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCS
T ss_pred             CccccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCcc
Confidence            44445899999999988778888899988887788877654

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=95.89  E-value=0.08  Score=40.40  Aligned_cols=96  Identities=17%  Similarity=0.205  Sum_probs=63.3

Q ss_pred             EEEEEcCChHHHHHHHHHHHCC-CeEEEEeCC-hhhHHHHHHHcCCcEEecCCCHHH------------HHHHcCCccEE
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMG-VKVTVISTS-PSKKSEAIERLGADSFLVSRDQDE------------MQAAMGTMDGI  251 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~-~~~~~~~~~~~ga~~~v~~~~~~~------------~~~~~~~~d~v  251 (314)
                      +|.|.|-|.+|....+.+...+ .+++.+... +........+++.+......+...            ..++..++|+|
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~vDvV   82 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADIV   82 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSEE
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCCCEE
Confidence            5788999999999999887665 466655543 222223334566654433222111            11222479999


Q ss_pred             EEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       252 ~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      +||+|.-.....+-..+..+-+++..+.+.
T Consensus        83 iEcTG~f~~~~~~~~hl~~G~K~vi~~~~~  112 (171)
T d1cf2o1          83 IDCTPEGIGAKNLKMYKEKGIKAIFQGGEK  112 (171)
T ss_dssp             EECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred             EEccCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence            999998766777888888888888887764

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.88  E-value=0.017  Score=45.08  Aligned_cols=92  Identities=15%  Similarity=0.109  Sum_probs=61.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc---
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---  258 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---  258 (314)
                      -.|.++.|+|.|.+|...++.++.+|.+|+.+++...... ..+..+....   .   .+.++....|+|+-+..-.   
T Consensus        42 l~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-~~~~~~~~~~---~---~l~~~l~~sD~v~~~~plt~~T  114 (188)
T d2naca1          42 LEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPES-VEKELNLTWH---A---TREDMYPVCDVVTLNCPLHPET  114 (188)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHH-HHHHHTCEEC---S---SHHHHGGGCSEEEECSCCCTTT
T ss_pred             ccccceeeccccccchhhhhhhhccCceEEEEeecccccc-cccccccccc---C---CHHHHHHhccchhhcccccccc
Confidence            4688999999999999999999999999999987643332 2233343221   1   2223445677777655421   


Q ss_pred             --ccHHHHHHhhccCCEEEEEcCC
Q 021300          259 --HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       259 --~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                        ..-...++.|+++..+|-++..
T Consensus       115 ~~li~~~~l~~mk~ga~lIN~aRG  138 (188)
T d2naca1         115 EHMINDETLKLFKRGAYIVNTARG  138 (188)
T ss_dssp             TTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             hhhhHHHHHHhCCCCCEEEecCch
Confidence              1245677788888888888763

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.85  E-value=0.0099  Score=45.16  Aligned_cols=67  Identities=25%  Similarity=0.350  Sum_probs=47.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~  259 (314)
                      +|-|+|.|.+|...+.-+...|.+|+++++++++.+++. +.++...   ..+   .+.....|++|-|+.+..
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~~~---~~~---~e~~~~~d~ii~~v~~~~   68 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-AAGAETA---STA---KAIAEQCDVIITMLPNSP   68 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEEC---SSH---HHHHHHCSEEEECCSSHH
T ss_pred             EEEEEehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHH-Hhhhhhc---ccH---HHHHhCCCeEEEEcCCHH
Confidence            577899999999999988889999999999998887775 4555321   111   122334677777766543

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.80  E-value=0.025  Score=45.51  Aligned_cols=81  Identities=23%  Similarity=0.174  Sum_probs=59.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~  261 (314)
                      -.|.+|+|.|.|.+|..+++++...|+++++++.+.....++....|++.+-+    +.  .+.-.+|+.+=|.-....-
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~~~----~~--~~~~~cDIl~PcA~~~~I~  110 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAP----NA--IYGVTCDIFAPCALGAVLN  110 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCG----GG--TTTCCCSEEEECSCSCCBS
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcccCC----cc--cccccccEecccccccccC
Confidence            47899999999999999999999999999999999888888888888765311    11  1234688887776433323


Q ss_pred             HHHHHhh
Q 021300          262 MPLIGLL  268 (314)
Q Consensus       262 ~~~~~~l  268 (314)
                      ....+.+
T Consensus       111 ~~~~~~l  117 (230)
T d1leha1         111 DFTIPQL  117 (230)
T ss_dssp             TTHHHHC
T ss_pred             hHHhhcc
Confidence            3334444

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.78  E-value=0.024  Score=43.76  Aligned_cols=96  Identities=16%  Similarity=0.177  Sum_probs=61.1

Q ss_pred             EEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCh-hhHHHHHHHcCCcEEecCCCHHH-----------HHHHcCCccEEE
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSP-SKKSEAIERLGADSFLVSRDQDE-----------MQAAMGTMDGII  252 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~-~~~~~~~~~~ga~~~v~~~~~~~-----------~~~~~~~~d~v~  252 (314)
                      +|.|.|-|.+|+..++.+.... .+++.+.+.. .....+....+.......+....           +.+...++|+|+
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDiVi   82 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIVV   82 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCCEEE
Confidence            5789999999999999998764 5777765543 33333333444333222222111           112223589999


Q ss_pred             EccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       253 d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      ||+|.-...+.+-..++.+-++++.|..+
T Consensus        83 ecTG~f~~~e~a~~hl~~G~KvIi~~~~~  111 (178)
T d1b7go1          83 DTTPNGVGAQYKPIYLQLQRNAIFQGGEK  111 (178)
T ss_dssp             ECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred             ECCCCcCCHHHHHHHHHcCCEEEEECCCC
Confidence            99998666677777777777888776544

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.75  E-value=0.014  Score=45.30  Aligned_cols=86  Identities=24%  Similarity=0.386  Sum_probs=63.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc-c-
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV-H-  259 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~-~-  259 (314)
                      -.|.++.|+|.|.+|...+++++.+|++|+++.+.+.+        +.....     +.+.++....|+|+-++.-. . 
T Consensus        40 l~gk~vgIiG~G~IG~~va~~l~~~g~~v~~~d~~~~~--------~~~~~~-----~~l~ell~~sDiv~~~~pl~~~t  106 (181)
T d1qp8a1          40 IQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPKE--------GPWRFT-----NSLEEALREARAAVCALPLNKHT  106 (181)
T ss_dssp             CTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCCC--------SSSCCB-----SCSHHHHTTCSEEEECCCCSTTT
T ss_pred             ccCceEEEeccccccccceeeeeccccccccccccccc--------cceeee-----echhhhhhccchhhccccccccc
Confidence            35889999999999999999999999999999876532        111111     12345667789988876421 1 


Q ss_pred             ---cHHHHHHhhccCCEEEEEcCC
Q 021300          260 ---PLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       260 ---~~~~~~~~l~~~G~~v~~G~~  280 (314)
                         .-...++.|+++..+|.+|..
T Consensus       107 ~~li~~~~l~~mk~~ailIN~~RG  130 (181)
T d1qp8a1         107 RGLVKYQHLALMAEDAVFVNVGRA  130 (181)
T ss_dssp             TTCBCHHHHTTSCTTCEEEECSCG
T ss_pred             ccccccceeeeccccceEEecccc
Confidence               236788999999999999863

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=95.68  E-value=0.0067  Score=48.94  Aligned_cols=93  Identities=17%  Similarity=0.256  Sum_probs=62.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccC----
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVS----  256 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g----  256 (314)
                      +.++.+||=+|+|. |..+..+++ .|++++.++.++...+.+.+. +.+..+.....+ +....+.||+|+-...    
T Consensus        40 ~~~~~~vLDiGcG~-G~~~~~l~~-~~~~v~giD~s~~~l~~a~~~-~~~~~~~~~~~~-l~~~~~~fD~ii~~~~~~~~  115 (246)
T d2avna1          40 LKNPCRVLDLGGGT-GKWSLFLQE-RGFEVVLVDPSKEMLEVAREK-GVKNVVEAKAED-LPFPSGAFEAVLALGDVLSY  115 (246)
T ss_dssp             CCSCCEEEEETCTT-CHHHHHHHT-TTCEEEEEESCHHHHHHHHHH-TCSCEEECCTTS-CCSCTTCEEEEEECSSHHHH
T ss_pred             cCCCCEEEEECCCC-chhcccccc-cceEEEEeecccccccccccc-cccccccccccc-cccccccccceeeecchhhh
Confidence            46788998899874 888888876 589999999999888666544 444333322212 2222357999885433    


Q ss_pred             --C-cccHHHHHHhhccCCEEEEE
Q 021300          257 --A-VHPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       257 --~-~~~~~~~~~~l~~~G~~v~~  277 (314)
                        + ...+..+.++|++||.++..
T Consensus       116 ~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         116 VENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             CSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhhHHHHHHHHHhhcCcCcEEEEE
Confidence              1 12366788899999988764

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=95.62  E-value=0.036  Score=45.20  Aligned_cols=78  Identities=22%  Similarity=0.340  Sum_probs=52.1

Q ss_pred             CCCCCCEEEEEcC-ChHHHHHHHHHHHCCCe-EEEEeCCh---hhHHHHH---HHcCCcEEe---cCCCHHHHHHHc---
Q 021300          180 LDKPGMHVGVVGL-GGLGHVAVKFAKAMGVK-VTVISTSP---SKKSEAI---ERLGADSFL---VSRDQDEMQAAM---  245 (314)
Q Consensus       180 ~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~-vi~v~~~~---~~~~~~~---~~~ga~~~v---~~~~~~~~~~~~---  245 (314)
                      .++|+.++||.|+ +++|++.++.+...|++ ++++.|+.   +...++.   +..|.+..+   |-.+++.+.++.   
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccc
Confidence            4789999999997 99999999988888984 66666653   2222322   345654322   445555544432   


Q ss_pred             -C--CccEEEEccCC
Q 021300          246 -G--TMDGIIDTVSA  257 (314)
Q Consensus       246 -~--~~d~v~d~~g~  257 (314)
                       .  ..|.++.+.|.
T Consensus        85 ~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          85 GDDVPLSAVFHAAAT   99 (259)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             ccccccccccccccc
Confidence             1  58889998883

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.56  E-value=0.036  Score=42.33  Aligned_cols=96  Identities=15%  Similarity=0.110  Sum_probs=72.4

Q ss_pred             cccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 021300          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (314)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~  240 (314)
                      +.+||+..+.+..|++.+.--.|.+++|+|. ..+|.-...++...|++|+++........+                  
T Consensus        17 ~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~------------------   78 (170)
T d1a4ia1          17 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE------------------   78 (170)
T ss_dssp             CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH------------------
T ss_pred             CCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHH------------------
Confidence            5678888888888888776679999999997 889999999999999999887665543322                  


Q ss_pred             HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCC
Q 021300          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       241 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                         .....|+++-++|....+.  -+.++++-.++++|..
T Consensus        79 ---~~~~aDivi~a~G~~~~i~--~~~vk~g~iviDvgi~  113 (170)
T d1a4ia1          79 ---EVNKGDILVVATGQPEMVK--GEWIKPGAIVIDCGIN  113 (170)
T ss_dssp             ---HHTTCSEEEECCCCTTCBC--GGGSCTTCEEEECCCB
T ss_pred             ---HHhhccchhhccccccccc--cccccCCCeEeccCcc
Confidence               2334778888888765322  3477888888888864

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.55  E-value=0.064  Score=36.74  Aligned_cols=73  Identities=10%  Similarity=0.247  Sum_probs=52.3

Q ss_pred             CCCCCEEEEEcCChHHHHH-HHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc
Q 021300          181 DKPGMHVGVVGLGGLGHVA-VKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a-~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~  258 (314)
                      .+...++.++|-|++|+.+ +++++..|..|...+.......+.+++.|++... .+.++.    ..+.|+|+-+.+-.
T Consensus         5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~-g~~~~~----i~~~d~vV~S~AI~   78 (96)
T d1p3da1           5 MRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYI-GHAEEH----IEGASVVVVSSAIK   78 (96)
T ss_dssp             CTTCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEE-SCCGGG----GTTCSEEEECTTSC
T ss_pred             chhCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEE-CCcccc----CCCCCEEEECCCcC
Confidence            4667889999998889777 7889999999999998755444455678886543 333332    24688888776643

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.52  E-value=0.013  Score=43.80  Aligned_cols=35  Identities=20%  Similarity=0.282  Sum_probs=31.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      -.|.++||+|+|.+|..-+..+...|++|+++...
T Consensus        11 l~gkrvLViGgG~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          11 LKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46789999999999999999999999999988643

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=95.47  E-value=0.029  Score=45.73  Aligned_cols=72  Identities=18%  Similarity=0.197  Sum_probs=47.5

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhH-HHHHH----HcCCcEEecC----CC---HHHH-------HHHc
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK-SEAIE----RLGADSFLVS----RD---QDEM-------QAAM  245 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~-~~~~~----~~ga~~~v~~----~~---~~~~-------~~~~  245 (314)
                      +.||.|+ +++|.+.++.+...|++|+++.++.++. +++.+    ..+.+.+...    .+   .+.+       .+..
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            5678887 9999999999999999999999885542 33333    3344333211    11   2222       2223


Q ss_pred             CCccEEEEccCC
Q 021300          246 GTMDGIIDTVSA  257 (314)
Q Consensus       246 ~~~d~v~d~~g~  257 (314)
                      +.+|++++++|.
T Consensus        83 g~iDilvnnAG~   94 (266)
T d1mxha_          83 GRCDVLVNNASA   94 (266)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            579999999883

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=95.46  E-value=0.028  Score=42.97  Aligned_cols=95  Identities=19%  Similarity=0.327  Sum_probs=64.3

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh--hHHHHHHHcCC-------c---------------EEecCCCHHHH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--KKSEAIERLGA-------D---------------SFLVSRDQDEM  241 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~--~~~~~~~~~ga-------~---------------~~v~~~~~~~~  241 (314)
                      +|.|.|-|.+|+++.+.+...+.+++.+-+...  ....+.+ +..       +               .+...+++..+
T Consensus         2 kigINGfGRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl~-yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~i   80 (168)
T d2g82a1           2 KVGINGFGRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLK-YDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKEI   80 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHH-CCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGGC
T ss_pred             EEEEECCcHHHHHHHHHHhcCCCEEEEECCCcchhhhhheee-cccccCccccccccccceeEecceeEEEEecCChHHC
Confidence            578899999999999988877888887765432  2223322 211       1               11223334444


Q ss_pred             HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      .+...++|+|+||+|.-...+.+...+..+-+-|++..+.
T Consensus        81 ~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  120 (168)
T d2g82a1          81 PWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA  120 (168)
T ss_dssp             CTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             cccccCCceeEeccccccchHHhhhhhccccceeeecccc
Confidence            4444579999999998877888888888887777776654

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.45  E-value=0.0013  Score=50.33  Aligned_cols=86  Identities=20%  Similarity=0.259  Sum_probs=55.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC-----cEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-----DSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga-----~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      +|+|+|+|.+|.+....+...|.+|.++++.+++...+ +..+.     ...+....++    ..+.+|++|-++-... 
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~D~iii~vka~~-   75 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSV-NLVETDGSIFNESLTANDPD----FLATSDLLLVTLKAWQ-   75 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEE-EEECTTSCEEEEEEEESCHH----HHHTCSEEEECSCGGG-
T ss_pred             EEEEECcCHHHHHHHHHHHHCCCceEEEEcCHHHhhhh-ccccCCccccccccccchhh----hhcccceEEEeecccc-
Confidence            68999999999998888888999999999987644322 11121     1112222222    2346999999998764 


Q ss_pred             HHHHHHhh----ccCCEEEEE
Q 021300          261 LMPLIGLL----KSQGKLVLV  277 (314)
Q Consensus       261 ~~~~~~~l----~~~G~~v~~  277 (314)
                      +..+++.+    .++..++.+
T Consensus        76 ~~~~~~~l~~~~~~~~~Iv~~   96 (167)
T d1ks9a2          76 VSDAVKSLASTLPVTTPILLI   96 (167)
T ss_dssp             HHHHHHHHHTTSCTTSCEEEE
T ss_pred             hHHHHHhhccccCcccEEeec
Confidence            45544444    445556655

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.43  E-value=0.085  Score=39.15  Aligned_cols=94  Identities=23%  Similarity=0.146  Sum_probs=61.8

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcEEe-cCCCHHHHHHH-cCCccEEEEccCCcc
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVH  259 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~~v-~~~~~~~~~~~-~~~~d~v~d~~g~~~  259 (314)
                      ++++|.|.|.+|...++.++..|.++++++.++++..+..++   .|...+. |..+++.+++. .+.+|.++-++++..
T Consensus         4 nHiII~G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~~d~   83 (153)
T d1id1a_           4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDA   83 (153)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCHH
T ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccccHH
Confidence            578999999999999999999999999999887654444333   2454432 34556665554 357999999888654


Q ss_pred             cHHH---HHHhhccCCEEEEEc
Q 021300          260 PLMP---LIGLLKSQGKLVLVG  278 (314)
Q Consensus       260 ~~~~---~~~~l~~~G~~v~~G  278 (314)
                      .-..   ..+-+.+.-+++.--
T Consensus        84 ~n~~~~~~~r~~~~~~~iia~~  105 (153)
T d1id1a_          84 DNAFVVLSAKDMSSDVKTVLAV  105 (153)
T ss_dssp             HHHHHHHHHHHHTSSSCEEEEC
T ss_pred             HHHHHHHHHHHhCCCCceEEEE
Confidence            2111   222334454555443

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.43  E-value=0.074  Score=40.64  Aligned_cols=94  Identities=19%  Similarity=0.218  Sum_probs=56.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC-cEEecCCCHHHHHHHcCCccEEEEccCCcc----c
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-DSFLVSRDQDEMQAAMGTMDGIIDTVSAVH----P  260 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga-~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~----~  260 (314)
                      +|-++|.|.+|...+.-+...|.+|+++++++++.+++.++... .....-...+...+.....|.++-++....    +
T Consensus         4 nIg~IGlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~~v   83 (176)
T d2pgda2           4 DIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDNF   83 (176)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHHH
T ss_pred             cEEEEeEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHHHH
Confidence            47889999999999888888999999999999988888654221 111112223344444455566655554322    1


Q ss_pred             HHHHHHhhccCCEEEEEcC
Q 021300          261 LMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       261 ~~~~~~~l~~~G~~v~~G~  279 (314)
                      ...+...++++-.++.++.
T Consensus        84 ~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          84 IEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHhccccCcEEEecCc
Confidence            2233334444444555443

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.42  E-value=0.012  Score=46.41  Aligned_cols=87  Identities=24%  Similarity=0.316  Sum_probs=59.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCC-cc--
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA-VH--  259 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~-~~--  259 (314)
                      .|.+|.|+|.|.+|...+++++.+|++|+++++...+..    .... ..   .+   +.++....|++.-++.. ..  
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~----~~~~-~~---~~---l~~l~~~~D~v~~~~plt~~T~  112 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKGD----HPDF-DY---VS---LEDLFKQSDVIDLHVPGIEQNT  112 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSC----CTTC-EE---CC---HHHHHHHCSEEEECCCCCGGGT
T ss_pred             cceeeeeeecccccccccccccccceeeeccCCccchhh----hcch-hH---HH---HHHHHHhcccceeeeccccccc
Confidence            578999999999999999999999999999987643210    0011 11   11   22333447777776542 21  


Q ss_pred             --cHHHHHHhhccCCEEEEEcCC
Q 021300          260 --PLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       260 --~~~~~~~~l~~~G~~v~~G~~  280 (314)
                        .-...++.|+++..+|-++..
T Consensus       113 ~li~~~~l~~mk~~a~lIN~aRG  135 (199)
T d1dxya1         113 HIINEAAFNLMKPGAIVINTARP  135 (199)
T ss_dssp             TSBCHHHHHHSCTTEEEEECSCT
T ss_pred             ccccHHHhhccCCceEEEecccH
Confidence              235677888888888888873

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.38  E-value=0.016  Score=44.75  Aligned_cols=108  Identities=8%  Similarity=-0.033  Sum_probs=62.2

Q ss_pred             hhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecC---CCHHHHHHHcCCcc
Q 021300          173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS---RDQDEMQAAMGTMD  249 (314)
Q Consensus       173 ~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~---~~~~~~~~~~~~~d  249 (314)
                      .+|+....--.|.+|||+|+|+.+.+++..+...| +++++.|+.++.+.+.+.+........   -+...+......+|
T Consensus         7 ~~l~~~~~~~~~k~vlIlGaGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   85 (177)
T d1nvta1           7 MALEEEIGRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVD   85 (177)
T ss_dssp             HHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCC
T ss_pred             HHHHHhCCCcCCCEEEEECCcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhccchhh
Confidence            34443332357889999999999998887776555 899999999988888766542100000   00000111123689


Q ss_pred             EEEEccCCccc------HHHHHHhhccCCEEEEEcCCC
Q 021300          250 GIIDTVSAVHP------LMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       250 ~v~d~~g~~~~------~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      ++++++.....      ...-...+.+...+.++-..+
T Consensus        86 liIn~tp~g~~~~~~~~~~~~~~~~~~~~~v~D~~y~p  123 (177)
T d1nvta1          86 IIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNP  123 (177)
T ss_dssp             EEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCSS
T ss_pred             hhccCCcccccccccccchhhhhccCcccceeeecCCc
Confidence            99998863210      001122344556666665543

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.37  E-value=0.058  Score=40.66  Aligned_cols=43  Identities=21%  Similarity=0.309  Sum_probs=35.9

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA  229 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga  229 (314)
                      +|-++|.|.+|...+.-+...|.+|.++++++++.+.+. +.++
T Consensus         3 kIg~IGlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~-~~~~   45 (162)
T d3cuma2           3 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV-AAGA   45 (162)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTTC
T ss_pred             EEEEEEEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh-hhhc
Confidence            588899999999888888888999999999988876664 4554

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=95.32  E-value=0.24  Score=36.74  Aligned_cols=92  Identities=10%  Similarity=0.273  Sum_probs=66.8

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCC--CeEEEEe--CChhhHHHHHHHcCCcEEecCCCHH---------------------
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMG--VKVTVIS--TSPSKKSEAIERLGADSFLVSRDQD---------------------  239 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g--~~vi~v~--~~~~~~~~~~~~~ga~~~v~~~~~~---------------------  239 (314)
                      ++.|+|+ |++|..+..+.+.+.  .+++.++  ++-+...+.+++|....++..++..                     
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g~   82 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQ   82 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEESH
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccCh
Confidence            6889999 999999999999874  4666554  4556677778888887766554431                     


Q ss_pred             -HHHHHc--CCccEEEEccCCcccHHHHHHhhccCCEEEEE
Q 021300          240 -EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       240 -~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~  277 (314)
                       .+.++.  ..+|+|+.++.+...+...+.+++.+-++.+.
T Consensus        83 ~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaLA  123 (151)
T d1q0qa2          83 QAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLA  123 (151)
T ss_dssp             HHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEEC
T ss_pred             HHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEEE
Confidence             111111  25899999998888899999999887665443

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=95.27  E-value=0.027  Score=46.12  Aligned_cols=75  Identities=16%  Similarity=0.343  Sum_probs=51.4

Q ss_pred             CCCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCChhhH-HHHHHHcCCcE---EecCCCHH-------HHHHHc--
Q 021300          182 KPGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSKK-SEAIERLGADS---FLVSRDQD-------EMQAAM--  245 (314)
Q Consensus       182 ~~g~~vlI~Ga-g--~vG~~a~~~a~~~g~~vi~v~~~~~~~-~~~~~~~ga~~---~v~~~~~~-------~~~~~~--  245 (314)
                      -.|.++||.|+ |  ++|.+.++.+...|++|+++.++.++. +++.++++.+.   ..|-.+++       .+.+..  
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~   83 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   83 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence            46889999984 3  599999999999999999999887765 44556666422   22333332       122222  


Q ss_pred             -CCccEEEEccC
Q 021300          246 -GTMDGIIDTVS  256 (314)
Q Consensus       246 -~~~d~v~d~~g  256 (314)
                       +..|+++.++|
T Consensus        84 ~~~ld~~i~~ag   95 (268)
T d2h7ma1          84 GNKLDGVVHSIG   95 (268)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCcceeeeccc
Confidence             35899999987

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=95.27  E-value=0.012  Score=50.29  Aligned_cols=77  Identities=21%  Similarity=0.141  Sum_probs=52.9

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH----cCCc--EEe--cCCCHHHHHHHcCCccEE
Q 021300          181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGAD--SFL--VSRDQDEMQAAMGTMDGI  251 (314)
Q Consensus       181 ~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~----~ga~--~~v--~~~~~~~~~~~~~~~d~v  251 (314)
                      +.+|++|||.|+ |-+|...+..+...|.+|++++|+..+...+.+.    ....  ..+  |-.+.+.+.++..++|.+
T Consensus         8 ~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v   87 (342)
T d1y1pa1           8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV   87 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred             CCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhh
Confidence            688999999998 9999999988888899999999987655444221    1111  122  223333344455678999


Q ss_pred             EEccCC
Q 021300          252 IDTVSA  257 (314)
Q Consensus       252 ~d~~g~  257 (314)
                      +.+.+.
T Consensus        88 ~~~a~~   93 (342)
T d1y1pa1          88 AHIASV   93 (342)
T ss_dssp             EECCCC
T ss_pred             hhhccc
Confidence            987764

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.25  E-value=0.0085  Score=46.52  Aligned_cols=34  Identities=15%  Similarity=0.369  Sum_probs=30.4

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCh
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSP  217 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~  217 (314)
                      +.+|+|+|+|+.|+.++..++.+|.+ |+++.+.+
T Consensus         4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            57899999999999999999999984 88888764

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=95.03  E-value=0.018  Score=47.58  Aligned_cols=96  Identities=21%  Similarity=0.246  Sum_probs=65.6

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~  259 (314)
                      ..++.+||=+|+|. |..+..+++.. +.+++.++.++...+.+.+....-..+.. +...+....+.||+|+..-.-. 
T Consensus        82 ~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~-d~~~l~~~~~sfD~v~~~~~~~-  158 (268)
T d1p91a_          82 DDKATAVLDIGCGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVA-SSHRLPFSDTSMDAIIRIYAPC-  158 (268)
T ss_dssp             CTTCCEEEEETCTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEEC-CTTSCSBCTTCEEEEEEESCCC-
T ss_pred             CCCCCEEEEeCCCC-cHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceee-ehhhccCCCCCEEEEeecCCHH-
Confidence            36778888889865 66677777765 67999999999888777666543232221 1111111234699999655444 


Q ss_pred             cHHHHHHhhccCCEEEEEcC
Q 021300          260 PLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       260 ~~~~~~~~l~~~G~~v~~G~  279 (314)
                      .+..+.++|+|+|.++..-.
T Consensus       159 ~~~e~~rvLkpgG~l~~~~p  178 (268)
T d1p91a_         159 KAEELARVVKPGGWVITATP  178 (268)
T ss_dssp             CHHHHHHHEEEEEEEEEEEE
T ss_pred             HHHHHHHHhCCCcEEEEEee
Confidence            48999999999999998753

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.97  E-value=0.0071  Score=48.81  Aligned_cols=75  Identities=20%  Similarity=0.162  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHHcCCccEEEEccCCc
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAV  258 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~g~~  258 (314)
                      .+.+|||.|+ |.+|...++.+...|.  ++++++|++...... +.-..... .|..+.+.+.+...++|.++.++|..
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~-~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~   91 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-AYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT   91 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-GGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc-ccceeeeeeeccccccccccccccccccccccccc
Confidence            4478999998 9999999998887775  899999875432111 11112222 33444445555566899999998853

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=94.95  E-value=0.035  Score=42.40  Aligned_cols=97  Identities=18%  Similarity=0.275  Sum_probs=63.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHC-CCeEEEEeCC---hhhHHHHHHHc---C---C------cE---------EecCCCHHH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTS---PSKKSEAIERL---G---A------DS---------FLVSRDQDE  240 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~---~~~~~~~~~~~---g---a------~~---------~v~~~~~~~  240 (314)
                      +|.|.|-|.+|+++.+.+... ..+++.+-+.   .+....+.+.-   |   .      +.         +...++++.
T Consensus         3 kIgINGFGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p~~   82 (169)
T d1u8fo1           3 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPSK   82 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEECCcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCChhh
Confidence            578899999999999877755 4677777553   33344444311   1   1      11         112223344


Q ss_pred             HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       241 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      +.+..-++|+|+||+|.-.....+...+..+-+-|++..+..
T Consensus        83 i~W~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~~  124 (169)
T d1u8fo1          83 IKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSA  124 (169)
T ss_dssp             CCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCS
T ss_pred             CCccccCCCEEEEecceeccHHHHHHHHhcCCceEeeccccc
Confidence            434344799999999987777888888888887777776654

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.95  E-value=0.051  Score=47.53  Aligned_cols=105  Identities=15%  Similarity=0.103  Sum_probs=67.6

Q ss_pred             hhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHH---H-------cC----CcEEecCC
Q 021300          172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIE---R-------LG----ADSFLVSR  236 (314)
Q Consensus       172 ~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~---~-------~g----a~~~v~~~  236 (314)
                      ...+.... +++|+++|=+|+|. |..+.++|+..|+ +++.++.++...+.+.+   +       ++    ........
T Consensus       206 ~~Il~~l~-Lkpgd~fLDLGCG~-G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~  283 (406)
T d1u2za_         206 SDVYQQCQ-LKKGDTFMDLGSGV-GNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKK  283 (406)
T ss_dssp             HHHHHHTT-CCTTCEEEEESCTT-SHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESS
T ss_pred             HHHHHHhC-CCCCCEEEeCCCCC-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeee
Confidence            44555555 89999988889874 8899999999886 79999999765433321   1       11    11221111


Q ss_pred             ---CHHHHHHHcCCccEEEEccC--C---cccHHHHHHhhccCCEEEEEc
Q 021300          237 ---DQDEMQAAMGTMDGIIDTVS--A---VHPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       237 ---~~~~~~~~~~~~d~v~d~~g--~---~~~~~~~~~~l~~~G~~v~~G  278 (314)
                         +.+........+|+++-..-  .   ...+..+.+.|++||+++..-
T Consensus       284 ~f~~~~~~d~~~~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         284 SFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             CSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             chhhccccccccccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence               12344444556888875321  1   123667888999999999863

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.95  E-value=0.15  Score=38.74  Aligned_cols=93  Identities=24%  Similarity=0.253  Sum_probs=58.6

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc----EEecCCCHHHHHHHcCCccEEEEccCCccc-
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD----SFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-  260 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~----~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~-  260 (314)
                      +|-|+|.|.+|...+..+...|.+|+++++++++.+++.++.+..    ........+.+.......+.++.+...... 
T Consensus         3 kIGvIGlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (178)
T d1pgja2           3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT   82 (178)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred             EEEEEeehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchh
Confidence            477899999999999999889999999999999998887775531    111223333444444455555555543321 


Q ss_pred             ---HHHHHHhhccCCEEEEEc
Q 021300          261 ---LMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       261 ---~~~~~~~l~~~G~~v~~G  278 (314)
                         +......+.++..++.++
T Consensus        83 ~~~~~~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          83 DSTIEQLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHHHHHHCCTTCEEEECC
T ss_pred             hhhhhhhhhhccccceecccC
Confidence               233444445555555444

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=94.90  E-value=0.14  Score=38.29  Aligned_cols=93  Identities=15%  Similarity=0.272  Sum_probs=57.8

Q ss_pred             CEEEEEcCChHHH-HHHHHHHHCC-CeEEEEeC-Chh-hHHHHHHHcCCcEEecCCCHHHHHHHc--CCccEEEEccCCc
Q 021300          185 MHVGVVGLGGLGH-VAVKFAKAMG-VKVTVIST-SPS-KKSEAIERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAV  258 (314)
Q Consensus       185 ~~vlI~Gag~vG~-~a~~~a~~~g-~~vi~v~~-~~~-~~~~~~~~~ga~~~v~~~~~~~~~~~~--~~~d~v~d~~g~~  258 (314)
                      =++.|+|+|.+|. ..+++++... .+++.+.. +++ +.....+++|....  +...+.+.+..  .++|+||.++...
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~--~~~~d~l~~~~~~~~iDiVf~ATpag   82 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTT--YAGVEGLIKLPEFADIDFVFDATSAS   82 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEE--SSHHHHHHHSGGGGGEEEEEECSCHH
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCccc--ccceeeeeecccccccCEEEEcCCch
Confidence            3688999999986 5677888764 47777764 333 33355677886543  33334433332  3699999988754


Q ss_pred             ccHH--HHHHhhccCCEEEEEcC
Q 021300          259 HPLM--PLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       259 ~~~~--~~~~~l~~~G~~v~~G~  279 (314)
                      ....  ...+.++.|-.+++...
T Consensus        83 ~h~~~~~~~~aa~~G~~VID~s~  105 (157)
T d1nvmb1          83 AHVQNEALLRQAKPGIRLIDLTP  105 (157)
T ss_dssp             HHHHHHHHHHHHCTTCEEEECST
T ss_pred             hHHHhHHHHHHHHcCCEEEEccc
Confidence            2233  33445666666777755

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=94.88  E-value=0.06  Score=40.72  Aligned_cols=90  Identities=11%  Similarity=0.135  Sum_probs=61.1

Q ss_pred             EEEEEcCChHHHH-HHHHHHHC-CCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHH
Q 021300          186 HVGVVGLGGLGHV-AVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP  263 (314)
Q Consensus       186 ~vlI~Gag~vG~~-a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~  263 (314)
                      ++.|+|+|..|.. .+..++.. +.+++++++++++.+.+.++++...++.+-+ +.   +...+|+|+-++....-.+.
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~l---l~~~iD~V~I~tp~~~H~~~   78 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYR-DV---LQYGVDAVMIHAATDVHSTL   78 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTT-GG---GGGCCSEEEECSCGGGHHHH
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccccHH-Hh---cccccceecccccccccccc
Confidence            5789999999954 56666555 5577788888888889988898755433221 21   12468999988877665677


Q ss_pred             HHHhhccCCEEEEEcCC
Q 021300          264 LIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       264 ~~~~l~~~G~~v~~G~~  280 (314)
                      +..++..| +=+++-.|
T Consensus        79 ~~~al~~g-k~V~~EKP   94 (167)
T d1xeaa1          79 AAFFLHLG-IPTFVDKP   94 (167)
T ss_dssp             HHHHHHTT-CCEEEESC
T ss_pred             cccccccc-cccccCCC
Confidence            77777654 44555443

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=94.85  E-value=0.071  Score=43.86  Aligned_cols=74  Identities=20%  Similarity=0.231  Sum_probs=52.8

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhh-----H--HHHHHHcCCcEEe-cCCCHHHHHHHcCCccEEEEc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-----K--SEAIERLGADSFL-VSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~-----~--~~~~~~~ga~~~v-~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      -++|||.|+ |.+|...+..+...|.+|++++|++..     .  ....+..+++.+. |..+.+.+.+...+.+.++.+
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~   82 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   82 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhh
Confidence            367999998 999999999998899999999886421     1  1122233454432 456677777777888888887


Q ss_pred             cCC
Q 021300          255 VSA  257 (314)
Q Consensus       255 ~g~  257 (314)
                      .+.
T Consensus        83 ~~~   85 (312)
T d1qyda_          83 LAG   85 (312)
T ss_dssp             CCC
T ss_pred             hhh
Confidence            753

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.84  E-value=0.016  Score=46.94  Aligned_cols=35  Identities=31%  Similarity=0.350  Sum_probs=31.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      ..++|+|+|+|+.|++++..++..|.+|+++++.+
T Consensus         3 ~~~kV~IiGaG~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            45789999999999999999999999999998754

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.82  E-value=0.02  Score=49.13  Aligned_cols=73  Identities=11%  Similarity=0.140  Sum_probs=52.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC-c-EEecCCCHHHHHHHcCCccEEEEccC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-D-SFLVSRDQDEMQAAMGTMDGIIDTVS  256 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga-~-~~v~~~~~~~~~~~~~~~d~v~d~~g  256 (314)
                      .++.+|||.|+ |.+|...+..+...|.+|+++++.......  ..... . ...|..+.+.+.+...++|.|+.+++
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~   88 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT--EDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAA   88 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC--GGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh--hhcccCcEEEeechhHHHHHHHhhcCCeEeeccc
Confidence            35788999998 999999999999999999988765432211  11222 2 22355566666677789999999875

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.80  E-value=0.014  Score=47.89  Aligned_cols=33  Identities=33%  Similarity=0.395  Sum_probs=30.3

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      |++|+|+|+|+.|++|+..++..|.+|+++...
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            578999999999999999999999999999864

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=94.62  E-value=0.093  Score=40.54  Aligned_cols=39  Identities=13%  Similarity=0.168  Sum_probs=34.1

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHH
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA  223 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~  223 (314)
                      .+|.|+|+|.+|...+.++...|.+|++++++++..++.
T Consensus         5 ~~vaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           5 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQG   43 (186)
T ss_dssp             SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHhhh
Confidence            568999999999999999999999999999998765544

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.61  E-value=0.041  Score=39.21  Aligned_cols=37  Identities=24%  Similarity=0.228  Sum_probs=33.9

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      ..++.+++|+|+|.+|+-.+..++.+|.++.++.+.+
T Consensus        19 ~~~~~~vvVvGgG~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          19 YEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             SCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             hCCCCEEEEECCCHHHHHHHHHHHhcchhheEeeccc
Confidence            5788999999999999999999999999999998865

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.58  E-value=0.017  Score=45.13  Aligned_cols=81  Identities=12%  Similarity=0.092  Sum_probs=56.5

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC----------cEEecCCCHHHHHHHcCCccEEEEc
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA----------DSFLVSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga----------~~~v~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      .+|.|+|+|..|.+.+.++...|-+|.++.++++..+++.+.--.          +.+...   ..+.+...+.|+++-+
T Consensus         8 ~KI~ViGaG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t---~~l~~a~~~ad~iiia   84 (189)
T d1n1ea2           8 NKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFT---SDVEKAYNGAEIILFV   84 (189)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEE---SCHHHHHTTCSCEEEC
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccccc---hhhhhccCCCCEEEEc
Confidence            369999999999999998888888999999998877766543111          011111   1234555678999999


Q ss_pred             cCCcccHHHHHHhhc
Q 021300          255 VSAVHPLMPLIGLLK  269 (314)
Q Consensus       255 ~g~~~~~~~~~~~l~  269 (314)
                      +.+.. +...++.++
T Consensus        85 vPs~~-~~~~~~~~~   98 (189)
T d1n1ea2          85 IPTQF-LRGFFEKSG   98 (189)
T ss_dssp             SCHHH-HHHHHHHHC
T ss_pred             CcHHH-HHHHHHHHH
Confidence            98764 666665543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.57  E-value=0.031  Score=42.86  Aligned_cols=43  Identities=21%  Similarity=0.267  Sum_probs=37.3

Q ss_pred             EEEEE-cCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC
Q 021300          186 HVGVV-GLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG  228 (314)
Q Consensus       186 ~vlI~-Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g  228 (314)
                      +|.|+ |+|.+|.+.++.+...|.+|++..|++++.+++.++++
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~   45 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYR   45 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            67888 56999999999999999999999999998877766554

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.55  E-value=0.014  Score=38.55  Aligned_cols=35  Identities=23%  Similarity=0.375  Sum_probs=31.2

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhh
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK  219 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~  219 (314)
                      ++|.|+|+|.+|.+.++-++.+|.++++++..++.
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~~v~vldp~~~~   36 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEP   36 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence            47899999999999999999999999999876543

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=94.55  E-value=0.089  Score=43.13  Aligned_cols=33  Identities=21%  Similarity=0.127  Sum_probs=27.1

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS  218 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~  218 (314)
                      .+||.|+ +++|.+.++.+...|++|++..++.+
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~   37 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA   37 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCH
Confidence            3566687 99999999999999999998776543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=94.52  E-value=0.047  Score=46.29  Aligned_cols=77  Identities=21%  Similarity=0.173  Sum_probs=54.5

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCcEE-ecCCCHHHHHHHcC--CccEEEE
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADSF-LVSRDQDEMQAAMG--TMDGIID  253 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----ga~~~-v~~~~~~~~~~~~~--~~d~v~d  253 (314)
                      ..|.+|||.|+ |.+|...++.+...|.+|+++++.......+.+..    +.+.+ .|-.+++.+.+...  .+|+++.
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~   85 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH   85 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhh
Confidence            35799999998 99999999999999999999998765433332222    23332 24456666665543  6899999


Q ss_pred             ccCCc
Q 021300          254 TVSAV  258 (314)
Q Consensus       254 ~~g~~  258 (314)
                      +++..
T Consensus        86 ~aa~~   90 (356)
T d1rkxa_          86 MAAQP   90 (356)
T ss_dssp             CCSCC
T ss_pred             hhccc
Confidence            88753

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.51  E-value=0.038  Score=43.18  Aligned_cols=39  Identities=26%  Similarity=0.360  Sum_probs=34.3

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHH
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA  223 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~  223 (314)
                      .+|.|+|+|.+|...++++...|.+|++++++++..+++
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCCcEEEEECChHHHHHH
Confidence            479999999999999999999999999999998765444

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=94.51  E-value=0.041  Score=41.87  Aligned_cols=96  Identities=17%  Similarity=0.283  Sum_probs=63.6

Q ss_pred             EEEEEcCChHHHHHHHHHHHC-CCeEEEEeCC---hhhHHHHHHHcC-------CcE---------------EecCCCHH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTS---PSKKSEAIERLG-------ADS---------------FLVSRDQD  239 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~---~~~~~~~~~~~g-------a~~---------------~v~~~~~~  239 (314)
                      +|.|.|-|.+|+++.+.+... ..+++.+-..   .+....+.+ +.       .+.               +...+++.
T Consensus         2 kigINGfGRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLlk-yDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p~   80 (166)
T d2b4ro1           2 KLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLK-YDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPS   80 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHH-CCTTTCSCSSCEEEETTEEEESSCEEEEECCSSGG
T ss_pred             eEEEECCCHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhhh-cccccccceeeeccCCceEEecCcEEEEEeCCChH
Confidence            578889999999999988765 4577776543   233444433 21       111               11223344


Q ss_pred             HHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300          240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       240 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      .+.+...++|+|+||+|.-.....+...+..+-+-|++..+..
T Consensus        81 ~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~k  123 (166)
T d2b4ro1          81 QIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPK  123 (166)
T ss_dssp             GCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS
T ss_pred             HccccccCCCEEEEecccccchhhhhhhhccCCCEEEEecccc
Confidence            4444445899999999987777888889988877777766543

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.50  E-value=0.15  Score=38.93  Aligned_cols=90  Identities=11%  Similarity=0.108  Sum_probs=58.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHC-CCeEEEE-eCChhhHHHHHHHcCCc---EEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVI-STSPSKKSEAIERLGAD---SFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~-g~~vi~v-~~~~~~~~~~~~~~ga~---~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      ++.|+|+|.+|...++.++.. +.+++.+ ++++++.+.+.++++..   .+  +.+.+.+.+ ...+|+|+-++....-
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~ll~-~~~iD~v~I~tp~~~h   79 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKI--HGSYESLLE-DPEIDALYVPLPTSLH   79 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEE--ESSHHHHHH-CTTCCEEEECCCGGGH
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceee--cCcHHHhhh-ccccceeeecccchhh
Confidence            578899999999888888876 5677755 55666667777887742   22  233332222 2468999988876655


Q ss_pred             HHHHHHhhccCCEEEEEcC
Q 021300          261 LMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       261 ~~~~~~~l~~~G~~v~~G~  279 (314)
                      +..+..++..+ +=+++-.
T Consensus        80 ~~~~~~~l~~g-~~v~~EK   97 (184)
T d1ydwa1          80 VEWAIKAAEKG-KHILLEK   97 (184)
T ss_dssp             HHHHHHHHTTT-CEEEECS
T ss_pred             cchhhhhhhcc-ceeeccc
Confidence            66666666644 4455533

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.48  E-value=0.033  Score=39.60  Aligned_cols=37  Identities=22%  Similarity=0.215  Sum_probs=32.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS  218 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~  218 (314)
                      +...+++|+|+|.+|+-+++.+..+|.+|.++.+.+.
T Consensus        20 ~~p~~v~IiGgG~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          20 EVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             hcCCeEEEECCCccceeeeeeecccccEEEEEEecce
Confidence            4457899999999999999999999999999987753

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.48  E-value=0.22  Score=33.35  Aligned_cols=69  Identities=23%  Similarity=0.344  Sum_probs=49.8

Q ss_pred             CEEEEEcCChHHHHH-HHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc
Q 021300          185 MHVGVVGLGGLGHVA-VKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a-~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~  258 (314)
                      .++-++|-|++|+.+ +++++..|+.|...+..+....+.+++.|+.... .++++.+    .+.|+|+-+.+-.
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~-gh~~~~i----~~~d~vV~SsAI~   71 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFV-PHSADNW----YDPDLVIKTPAVR   71 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEES-SCCTTSC----CCCSEEEECTTCC
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEe-eeccccc----CCCCEEEEecCcC
Confidence            357778988889865 6888899999999998876665667889987543 3443322    4688988776644

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.46  E-value=0.033  Score=43.31  Aligned_cols=88  Identities=17%  Similarity=0.183  Sum_probs=58.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCC-c--
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA-V--  258 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~-~--  258 (314)
                      -.+.++.|+|.|.+|...+++++.+|.+|+.+++.....     ......   ..   .+.++....|+++-+..- .  
T Consensus        42 l~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~-----~~~~~~---~~---~l~ell~~sDii~i~~plt~~T  110 (188)
T d1sc6a1          42 ARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP-----LGNATQ---VQ---HLSDLLNMSDVVSLHVPENPST  110 (188)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC-----CTTCEE---CS---CHHHHHHHCSEEEECCCSSTTT
T ss_pred             ccceEEEEeecccchhhhhhhcccccceEeeccccccch-----hhhhhh---hh---hHHHHHhhccceeecccCCcch
Confidence            367899999999999999999999999999998754311     001111   11   122333446777766541 1  


Q ss_pred             --ccHHHHHHhhccCCEEEEEcCC
Q 021300          259 --HPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       259 --~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                        ..-...++.|+++..+|.++..
T Consensus       111 ~~li~~~~l~~mk~~a~lIN~aRG  134 (188)
T d1sc6a1         111 KNMMGAKEISLMKPGSLLINASRG  134 (188)
T ss_dssp             TTCBCHHHHHHSCTTEEEEECSCS
T ss_pred             hhhccHHHHhhCCCCCEEEEcCcH
Confidence              1235677788888888887763

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=94.41  E-value=0.089  Score=44.51  Aligned_cols=36  Identities=19%  Similarity=0.104  Sum_probs=29.3

Q ss_pred             CCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCChhh
Q 021300          184 GMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPSK  219 (314)
Q Consensus       184 g~~vlI~Ga---g~vG~~a~~~a~~~g~~vi~v~~~~~~  219 (314)
                      ++..||.|+   .++|.+.++.+...|++|++..+....
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~   40 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVY   40 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhh
Confidence            466788884   389999999999999999988776553

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=94.38  E-value=0.026  Score=45.04  Aligned_cols=95  Identities=16%  Similarity=0.165  Sum_probs=60.4

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHH---CCCeEEEEeCChhhHHHHHHHc---CCc--EEecCCCHHHHHHHcCCccEEE
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKA---MGVKVTVISTSPSKKSEAIERL---GAD--SFLVSRDQDEMQAAMGTMDGII  252 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~---~g~~vi~v~~~~~~~~~~~~~~---ga~--~~v~~~~~~~~~~~~~~~d~v~  252 (314)
                      ++++.+||=+|+|. |..+..+++.   .+++++.++.+++..+.+.+++   +..  .-+...+  ....-.+.+|+++
T Consensus        37 ~~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d--~~~~~~~~~d~i~  113 (225)
T d1im8a_          37 VTADSNVYDLGCSR-GAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCND--IRHVEIKNASMVI  113 (225)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSC--TTTCCCCSEEEEE
T ss_pred             cCCCCEEEEeccch-hhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccch--hhccccccceeeE
Confidence            58899999999864 6666677764   4789999999998877665543   221  1111111  1111123566665


Q ss_pred             EccCC--------cccHHHHHHhhccCCEEEEEc
Q 021300          253 DTVSA--------VHPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       253 d~~g~--------~~~~~~~~~~l~~~G~~v~~G  278 (314)
                      -...-        ...+..+.+.|+|+|.++..-
T Consensus       114 ~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         114 LNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             EESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence            54321        124788899999999999863

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.26  E-value=0.039  Score=42.98  Aligned_cols=94  Identities=23%  Similarity=0.253  Sum_probs=58.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHH---HHHcCCcEE-ecCCCHHHHHHHcCCccEEEEccC
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVS  256 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~---~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~g  256 (314)
                      +++| +||=+|+| .|..+..+++ .|.+++.++.++...+.+   .++.+.+.+ +...+.+.. ...+.||+|+...-
T Consensus        29 ~~~g-rvLDiGcG-~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~-~~~~~fD~I~~~~~  104 (198)
T d2i6ga1          29 VAPG-RTLDLGCG-NGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTL-TFDGEYDFILSTVV  104 (198)
T ss_dssp             SCSC-EEEEETCT-TSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTC-CCCCCEEEEEEESC
T ss_pred             CCCC-cEEEECCC-CCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccc-cccccccEEEEeee
Confidence            4555 88889987 5777777776 589999999998766543   233344321 211221110 12356999886332


Q ss_pred             -----Cc---ccHHHHHHhhccCCEEEEEc
Q 021300          257 -----AV---HPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       257 -----~~---~~~~~~~~~l~~~G~~v~~G  278 (314)
                           ..   ..+..+.++|+++|.++...
T Consensus       105 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~  134 (198)
T d2i6ga1         105 MMFLEAQTIPGLIANMQRCTKPGGYNLIVA  134 (198)
T ss_dssp             GGGSCTTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             eecCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence                 11   24666778899999988763

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.17  E-value=0.039  Score=39.32  Aligned_cols=37  Identities=19%  Similarity=0.365  Sum_probs=33.1

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      ++...+++|+|+|.+|+-++..++.+|.+|.++.+.+
T Consensus        19 l~~p~~v~IiGgG~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          19 IKESKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CCCCSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             cCCCCEEEEECCchHHHHHHHHHHhccccceeeehhc
Confidence            4556899999999999999999999999999998864

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.12  E-value=0.06  Score=44.69  Aligned_cols=94  Identities=17%  Similarity=0.174  Sum_probs=58.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc-----EEecCCCHHHHH-H--HcCCccE
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD-----SFLVSRDQDEMQ-A--AMGTMDG  250 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~-----~~v~~~~~~~~~-~--~~~~~d~  250 (314)
                      +++.+||=+|+|. |..++.+++. |++|+.++.+++.++.+.++.   +..     ..+...+..... .  ..+.||.
T Consensus        55 ~~~~~vLD~GcG~-G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~  132 (292)
T d1xvaa_          55 HGCHRVLDVACGT-GVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDA  132 (292)
T ss_dssp             TTCCEEEESSCTT-SHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEE
T ss_pred             cCCCEEEEecCCC-cHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeeccccccccccCCCCCceE
Confidence            5678898889865 7777888775 899999999988765443322   211     111111111111 1  1246998


Q ss_pred             EEEccCCc--------------ccHHHHHHhhccCCEEEEE
Q 021300          251 IIDTVSAV--------------HPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       251 v~d~~g~~--------------~~~~~~~~~l~~~G~~v~~  277 (314)
                      |+.....-              ..+..+.+.|+|||++++-
T Consensus       133 v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~  173 (292)
T d1xvaa_         133 VICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID  173 (292)
T ss_dssp             EEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             EEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEEe
Confidence            88533210              1478899999999998873

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=94.12  E-value=0.056  Score=41.05  Aligned_cols=97  Identities=15%  Similarity=0.234  Sum_probs=63.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCh--hhHHHHHHHc---C---Cc------E---------EecCCCHHHH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSP--SKKSEAIERL---G---AD------S---------FLVSRDQDEM  241 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~--~~~~~~~~~~---g---a~------~---------~v~~~~~~~~  241 (314)
                      +|.|.|-|.+|+++.+.+.... .+++.+-+..  +....+.+.-   |   .+      .         +...++++.+
T Consensus         3 kigINGFGRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~~i   82 (166)
T d1gado1           3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPANL   82 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGGG
T ss_pred             EEEEECCcHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChHHC
Confidence            5778899999999999888764 5777666542  2222332210   1   11      0         1122334444


Q ss_pred             HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      .+-.-++|+|+||+|.-.....+...+..|-+-|++..+..
T Consensus        83 ~W~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~~  123 (166)
T d1gado1          83 KWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSK  123 (166)
T ss_dssp             CHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS
T ss_pred             CccccCCCEEEEccccccCHHHHHHHhcCCCceEEeecccc
Confidence            44445899999999987777888888988877777776654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.11  E-value=0.047  Score=39.12  Aligned_cols=38  Identities=29%  Similarity=0.453  Sum_probs=34.2

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS  218 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~  218 (314)
                      ++++++++|+|+|.+|.-++..++.+|.+|.++.+.+.
T Consensus        27 ~~~~~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          27 LRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             hhcCCeEEEECcchhHHHHHHHhhcccceEEEEeeccc
Confidence            46789999999999999999999999999999988753

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.10  E-value=0.067  Score=43.25  Aligned_cols=73  Identities=12%  Similarity=0.111  Sum_probs=46.6

Q ss_pred             CEEEEEcC-ChHHHHHHHHHH---HCCCeEEEEeCChhhHHHHHH--HcCCcEE---ecCCCHH----HHH---HHc--C
Q 021300          185 MHVGVVGL-GGLGHVAVKFAK---AMGVKVTVISTSPSKKSEAIE--RLGADSF---LVSRDQD----EMQ---AAM--G  246 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~---~~g~~vi~v~~~~~~~~~~~~--~~ga~~~---v~~~~~~----~~~---~~~--~  246 (314)
                      .+|||.|+ +++|++.++.+.   ..|++|+++.|++++.+++.+  +.+.+..   .|-.+++    .+.   +..  +
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            47899987 999999886654   358899999999876555432  1122222   2333432    222   222  3


Q ss_pred             CccEEEEccCC
Q 021300          247 TMDGIIDTVSA  257 (314)
Q Consensus       247 ~~d~v~d~~g~  257 (314)
                      .+|+++++.|.
T Consensus        83 ~iDiLvnNAg~   93 (248)
T d1snya_          83 GLNVLFNNAGI   93 (248)
T ss_dssp             CCSEEEECCCC
T ss_pred             CcceEEeeccc
Confidence            69999999873

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.03  E-value=0.046  Score=39.00  Aligned_cols=36  Identities=25%  Similarity=0.338  Sum_probs=32.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      +.+++++|+|+|.+|+-.++.++.+|.+|.++.+.+
T Consensus        20 ~~p~~i~IiG~G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          20 NVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCCeEEEECCChHHHHHHHHHHHcCCceEEEEeec
Confidence            455889999999999999999999999999998774

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=94.02  E-value=0.0091  Score=44.78  Aligned_cols=82  Identities=16%  Similarity=0.076  Sum_probs=53.5

Q ss_pred             EEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHHHHHhh
Q 021300          189 VVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLL  268 (314)
Q Consensus       189 I~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l  268 (314)
                      ++|+|.+|...+..++..+....++.|++++.+++.++++... .+..      +.....|+||-++.... +...++.+
T Consensus         4 fIG~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~-~~~~------~~~~~~DiVil~v~d~~-i~~v~~~l   75 (153)
T d2i76a2           4 FVGTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKA-ATLE------KHPELNGVVFVIVPDRY-IKTVANHL   75 (153)
T ss_dssp             EESCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCC-CSSC------CCCC---CEEECSCTTT-HHHHHTTT
T ss_pred             EEeCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccc-cchh------hhhccCcEEEEeccchh-hhHHHhhh
Confidence            5799999998887665533334578899999999988777532 2211      23456899999998775 88888888


Q ss_pred             ccCCE-EEEEc
Q 021300          269 KSQGK-LVLVG  278 (314)
Q Consensus       269 ~~~G~-~v~~G  278 (314)
                      +..++ ++.+.
T Consensus        76 ~~~~~ivi~~s   86 (153)
T d2i76a2          76 NLGDAVLVHCS   86 (153)
T ss_dssp             CCSSCCEEECC
T ss_pred             cccceeeeecc
Confidence            75554 45554

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=93.97  E-value=0.075  Score=40.64  Aligned_cols=97  Identities=14%  Similarity=0.231  Sum_probs=61.9

Q ss_pred             EEEEEcCChHHHHHHHHHHHCC----CeEEEEeCC--hhhHHHHHHH------cCCc---------------EEecCCCH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMG----VKVTVISTS--PSKKSEAIER------LGAD---------------SFLVSRDQ  238 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g----~~vi~v~~~--~~~~~~~~~~------~ga~---------------~~v~~~~~  238 (314)
                      +|.|.|-|.+|+++.+.+...+    .+++.+-..  .+....+.+.      +..+               .++..+++
T Consensus         3 kigINGfGRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p   82 (173)
T d1obfo1           3 RVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRNP   82 (173)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSCG
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCCH
Confidence            5788899999999988775432    356665543  2223333221      1111               12223344


Q ss_pred             HHHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300          239 DEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       239 ~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      +.+.+..-++|+|+||+|.-.....+...|..+-+-|++..+..
T Consensus        83 ~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~~  126 (173)
T d1obfo1          83 AQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGG  126 (173)
T ss_dssp             GGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCC
T ss_pred             HHCcccccccceEEEecccccCHHHHHHHhccCCcceEEecCCC
Confidence            44444455899999999987667888899998888888877643

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.94  E-value=0.11  Score=41.55  Aligned_cols=94  Identities=16%  Similarity=0.132  Sum_probs=60.4

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEEecCCCHHHHHHHcCCccEEEEccCC
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      .+++.+||=+|+|. |..+..+++ .|++++.++.++.....+.+++   +...-+...+...+ ...+.||+|+-.-+.
T Consensus        39 ~~~~~~iLDiGcGt-G~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l-~~~~~fD~I~~~~~~  115 (251)
T d1wzna1          39 KREVRRVLDLACGT-GIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEI-AFKNEFDAVTMFFST  115 (251)
T ss_dssp             SSCCCEEEEETCTT-CHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGC-CCCSCEEEEEECSSG
T ss_pred             CCCCCEEEEeCCCC-Cccchhhcc-cceEEEEEeeccccccccccccccccccchheehhhhhc-ccccccchHhhhhhh
Confidence            47778899999876 777777776 5889999999987765554432   32211112221111 123469998864332


Q ss_pred             c---------ccHHHHHHhhccCCEEEEE
Q 021300          258 V---------HPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       258 ~---------~~~~~~~~~l~~~G~~v~~  277 (314)
                      -         ..+..+.++|++||+++.-
T Consensus       116 ~~~~~~~~~~~~L~~~~~~LkpgG~lii~  144 (251)
T d1wzna1         116 IMYFDEEDLRKLFSKVAEALKPGGVFITD  144 (251)
T ss_dssp             GGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhcCChHHHHHHHHHHHHHcCCCcEEEEE
Confidence            1         2366788999999998763

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.92  E-value=0.037  Score=44.38  Aligned_cols=37  Identities=27%  Similarity=0.282  Sum_probs=33.2

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      .+.+.+|+|+|+|+.|+.++..++..|.+++++...+
T Consensus        46 ~~~~k~VvIIGaGpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             ccCCceEEEEcccHHHHHHHHHHHHhccceeeEeecc
Confidence            3678999999999999999999999999999998654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.92  E-value=0.039  Score=39.65  Aligned_cols=35  Identities=26%  Similarity=0.217  Sum_probs=31.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      +..++++|+|+|.+|+-.++.++.+|.+|.++.++
T Consensus        18 ~~P~~vvIIGgG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          18 YCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             SCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             cCCCeEEEECCCccHHHHHHHHhhcCCeEEEEEec
Confidence            34578999999999999999999999999998764

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.91  E-value=0.098  Score=40.12  Aligned_cols=90  Identities=14%  Similarity=0.172  Sum_probs=56.2

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhh--HHHHHHHcCCcEE----ecC---CCHHHHHHHcCCccEEEEccC
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK--KSEAIERLGADSF----LVS---RDQDEMQAAMGTMDGIIDTVS  256 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~--~~~~~~~~ga~~~----v~~---~~~~~~~~~~~~~d~v~d~~g  256 (314)
                      +|.|+|+|..|.+.+..+...|.+|.++.+..++  .+.+. +......    +..   ...+...+.....|+++.++.
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~avp   80 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSIS-AGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS   80 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHH-TTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHh-hhhhhhhhcchhccccccccccHHHHHhccchhhcccc
Confidence            6889999999999999988888999999885432  32332 1111000    000   012344556678999999998


Q ss_pred             CcccHHHHHHhhcc---CCEEEEE
Q 021300          257 AVHPLMPLIGLLKS---QGKLVLV  277 (314)
Q Consensus       257 ~~~~~~~~~~~l~~---~G~~v~~  277 (314)
                      ... +...++.+.+   ...++.+
T Consensus        81 s~~-~~~~~~~l~~~l~~~~ii~~  103 (180)
T d1txga2          81 TDG-VLPVMSRILPYLKDQYIVLI  103 (180)
T ss_dssp             GGG-HHHHHHHHTTTCCSCEEEEC
T ss_pred             hhh-hHHHHHhhccccccceeccc
Confidence            765 6666665544   3444444

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.91  E-value=0.0066  Score=51.33  Aligned_cols=69  Identities=19%  Similarity=0.203  Sum_probs=43.2

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcCCc--EEecCCCHHHHHHHcCCccEEEEccC
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVS  256 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~~~~~ga~--~~v~~~~~~~~~~~~~~~d~v~d~~g  256 (314)
                      .+|||.|+ |.+|...+..+...|.+|+++++... +...+.......  .+.+.   +.+..+..++|+||.+++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~d~VihlAa   74 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINH---DVVEPLYIEVDQIYHLAS   74 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEEC---CTTSCCCCCCSEEEECCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEeh---HHHHHHHcCCCEEEECcc
Confidence            57999998 99999999999889999999875322 221221111111  22222   222233347999999876

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=93.85  E-value=0.16  Score=37.43  Aligned_cols=91  Identities=18%  Similarity=0.230  Sum_probs=58.0

Q ss_pred             CEEEEEc-CChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH----HHHHcC---CccEEEEccC
Q 021300          185 MHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE----MQAAMG---TMDGIIDTVS  256 (314)
Q Consensus       185 ~~vlI~G-ag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~----~~~~~~---~~d~v~d~~g  256 (314)
                      .+|.|+| .|.+|...+..++..|.+|.+++++.....+.. ..+++.++.....+.    +.+...   .=.+++|+.+
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~~S   88 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI-LANADVVIVSVPINLTLETIERLKPYLTENMLLADLTS   88 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH-HTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh-hhhccccccccchhhheeeeecccccccCCceEEEecc
Confidence            5799999 599999999999999999999999876654443 346777666555432    222222   2347888876


Q ss_pred             CcccHHHHHHhhccCCEEEEE
Q 021300          257 AVHPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       257 ~~~~~~~~~~~l~~~G~~v~~  277 (314)
                      ........+.... ..+++..
T Consensus        89 vk~~~~~~~~~~~-~~~~v~~  108 (152)
T d2pv7a2          89 VKREPLAKMLEVH-TGAVLGL  108 (152)
T ss_dssp             CCHHHHHHHHHHC-SSEEEEE
T ss_pred             cCHHHHHHHHHHc-cCCEEEe
Confidence            5432333333222 3455544

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.81  E-value=0.064  Score=38.45  Aligned_cols=36  Identities=33%  Similarity=0.277  Sum_probs=32.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      ..+.+++|+|+|.+|+-+++.+..+|.+|.++.+.+
T Consensus        28 ~~~k~vvViGgG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          28 PEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCCEEEEECChHHHHHHHHHhhccceEEEEEEecC
Confidence            567899999999999999999999999999998765

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.78  E-value=0.051  Score=38.99  Aligned_cols=35  Identities=26%  Similarity=0.336  Sum_probs=31.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      ..++++|+|+|.+|+-+++.+..+|.+|.++.+.+
T Consensus        22 ~p~~~vIiG~G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          22 IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCeEEEECCCchHHHHHHHHHhhCcceeEEEecc
Confidence            44799999999999999999999999999998865

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.75  E-value=0.052  Score=38.48  Aligned_cols=35  Identities=23%  Similarity=0.242  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      -.++++|+|+|.+|+-+++.++.+|.+|.++.+.+
T Consensus        20 ~p~~vvIiGgG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          20 LPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCEEEEECCChhhHHHHHHhhccccEEEEEeecc
Confidence            34789999999999999999999999999998875

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=93.74  E-value=0.075  Score=40.43  Aligned_cols=97  Identities=16%  Similarity=0.224  Sum_probs=61.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHC---CCeEEEEeCC--hhhHHHHHHHc---C---C------cE---------EecCCCHH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAM---GVKVTVISTS--PSKKSEAIERL---G---A------DS---------FLVSRDQD  239 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~---g~~vi~v~~~--~~~~~~~~~~~---g---a------~~---------~v~~~~~~  239 (314)
                      +|.|.|-|.+|+++.+.+...   ..+++.+-+.  .+....+.+.-   |   .      +.         +...++++
T Consensus         2 kIgINGfGRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p~   81 (169)
T d1hdgo1           2 RVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDPS   81 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSGG
T ss_pred             EEEEECCChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCChh
Confidence            688999999999999877643   3577766543  23333333210   1   1      11         11223334


Q ss_pred             HHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300          240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       240 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      .+.+..-++|+|+||+|.-.....+...+..|-+-|++..+..
T Consensus        82 ~i~W~~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~k  124 (169)
T d1hdgo1          82 KLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAK  124 (169)
T ss_dssp             GSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB
T ss_pred             hCCccccCCCEEEEecceeccccchhhhccCCCceEEEecccC
Confidence            4433344799999999987778888889988876677766653

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.69  E-value=0.47  Score=34.89  Aligned_cols=73  Identities=19%  Similarity=0.163  Sum_probs=47.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHcC-------CcEEecCCCHHHHHHHcCCccEEE
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLG-------ADSFLVSRDQDEMQAAMGTMDGII  252 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~g-------a~~~v~~~~~~~~~~~~~~~d~v~  252 (314)
                      ..+.+|.|+|+|.+|...+..+...+.  ++++++..+++.+..+..+.       ....+-..+.    +...+.|+|+
T Consensus         4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~----~~l~daDvvv   79 (148)
T d1ldna1           4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY----DDCRDADLVV   79 (148)
T ss_dssp             TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG----GGTTTCSEEE
T ss_pred             CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH----HHhccceeEE
Confidence            456789999999999988888887664  78888877765333322221       1112222222    2345799999


Q ss_pred             EccCCc
Q 021300          253 DTVSAV  258 (314)
Q Consensus       253 d~~g~~  258 (314)
                      -++|..
T Consensus        80 itag~~   85 (148)
T d1ldna1          80 ICAGAN   85 (148)
T ss_dssp             ECCSCC
T ss_pred             Eecccc
Confidence            998853

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=93.64  E-value=0.14  Score=43.09  Aligned_cols=95  Identities=15%  Similarity=0.116  Sum_probs=60.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcC-----C-----cEEecCCCHHHHHHHcCCccE
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLG-----A-----DSFLVSRDQDEMQAAMGTMDG  250 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~g-----a-----~~~v~~~~~~~~~~~~~~~d~  250 (314)
                      ...++|||+|+|. |..+-.+++... .++.++..+++-.+...+-|.     .     -.++..+..+.++...+.||+
T Consensus        76 ~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~Da~~~l~~~~~~yDv  154 (312)
T d1uira_          76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDV  154 (312)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred             CCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEchHHHHhhhcCCcccE
Confidence            4557899998754 555666777654 488888888765543333331     1     134444444666665668999


Q ss_pred             EEEcc----CC---------cccHHHHHHhhccCCEEEEE
Q 021300          251 IIDTV----SA---------VHPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       251 v~d~~----g~---------~~~~~~~~~~l~~~G~~v~~  277 (314)
                      |+--.    +.         ...+..+.+.|+++|.++.-
T Consensus       155 Ii~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~  194 (312)
T d1uira_         155 VIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ  194 (312)
T ss_dssp             EEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred             EEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEe
Confidence            87432    21         12357788999999998764

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=93.49  E-value=0.055  Score=43.25  Aligned_cols=35  Identities=20%  Similarity=0.300  Sum_probs=30.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      +.-.+|+|+|+|..|++++..++..|.+|.++++.
T Consensus         4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCcEEEECccHHHHHHHHHHHHCCCCEEEEeCC
Confidence            34468999999999999999999999999999864

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=93.49  E-value=0.062  Score=43.73  Aligned_cols=59  Identities=19%  Similarity=0.200  Sum_probs=42.3

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcC--CccEEEEccCCc
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG--TMDGIIDTVSAV  258 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~--~~d~v~d~~g~~  258 (314)
                      .+|||.|+ |.+|...+..++..|.+|+.+++.+               +|-.+.+.+.+...  .+|+|+++.+..
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------~D~~d~~~~~~~l~~~~~d~vih~a~~~   63 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEKKPNVVINCAAHT   63 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------ccCCCHHHHHHHHHHcCCCEEEeecccc
Confidence            36999998 9999999999999999998887653               13334444444332  578888877643

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=93.43  E-value=0.13  Score=43.24  Aligned_cols=96  Identities=20%  Similarity=0.181  Sum_probs=59.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHc-CC---------cEEecCCCHHHHHHHcCCccE
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERL-GA---------DSFLVSRDQDEMQAAMGTMDG  250 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~-ga---------~~~v~~~~~~~~~~~~~~~d~  250 (314)
                      ....+|||+|+|. |..+-.+++.... ++.++..+++-. ++++++ ..         ..++..+...+++...+.||+
T Consensus       105 ~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv-~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~~~~~yDv  182 (312)
T d2b2ca1         105 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVI-DVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDV  182 (312)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHH-HHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEE
T ss_pred             CCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHH-HHHHhhchhhccccCCCCeEEEEchHHHHHHhCCCCCCE
Confidence            4457899998754 4455567776664 677777776554 554554 21         123333334566665568999


Q ss_pred             EEEccCC----------cccHHHHHHhhccCCEEEEEcC
Q 021300          251 IIDTVSA----------VHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       251 v~d~~g~----------~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      |+--...          ...+..+.+.|+++|.++.-+.
T Consensus       183 II~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~~  221 (312)
T d2b2ca1         183 IITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE  221 (312)
T ss_dssp             EEECCC-------------HHHHHHHHEEEEEEEEEECC
T ss_pred             EEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEecC
Confidence            8853322          1236678889999999998754

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=93.37  E-value=0.24  Score=41.02  Aligned_cols=72  Identities=17%  Similarity=0.218  Sum_probs=47.0

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC--hhh--HHHHHHHcC-CcEE-ecCCCHHHHHHHcC--CccEEEEccC
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS--PSK--KSEAIERLG-ADSF-LVSRDQDEMQAAMG--TMDGIIDTVS  256 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~--~~~--~~~~~~~~g-a~~~-v~~~~~~~~~~~~~--~~d~v~d~~g  256 (314)
                      +|||.|+ |.+|...+..+...|.+|+++++-  ...  ..+..+..+ .+.+ .|-.+.+.+.++..  ++|.||.+++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence            6999998 999999999998889999988632  111  112222333 3322 23355555555543  5899999886


Q ss_pred             C
Q 021300          257 A  257 (314)
Q Consensus       257 ~  257 (314)
                      .
T Consensus        82 ~   82 (338)
T d1orra_          82 Q   82 (338)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=93.32  E-value=0.21  Score=40.57  Aligned_cols=43  Identities=21%  Similarity=0.279  Sum_probs=35.1

Q ss_pred             hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      +++....--.|.+|+|-|.|.+|..+++++...|++++.+.+.
T Consensus        26 ~~~~~~~~l~g~~v~IQGfGnVG~~~a~~L~e~GakvvavsD~   68 (255)
T d1bgva1          26 VMKHENDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGP   68 (255)
T ss_dssp             HHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEET
T ss_pred             HHHhCCCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Confidence            3444443357899999999999999999999999999988653

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.32  E-value=0.074  Score=38.69  Aligned_cols=37  Identities=22%  Similarity=0.204  Sum_probs=33.6

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      ++++.+++|+|+|.+|+-++..++..|.+|.++.+.+
T Consensus        32 ~~~~k~v~VIGgG~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          32 LIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             hccCCEEEEECCchHHHHHHHHHHhhCcceeeeeecc
Confidence            4678999999999999999999999999999998765

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=93.30  E-value=0.12  Score=42.58  Aligned_cols=96  Identities=22%  Similarity=0.174  Sum_probs=62.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHc-----CC-----cEEecCCCHHHHHHHcCCccE
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERL-----GA-----DSFLVSRDQDEMQAAMGTMDG  250 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~-----ga-----~~~v~~~~~~~~~~~~~~~d~  250 (314)
                      ...++|||+|+|. |..+..+++..+. ++.++.-+++-. ++++++     ++     -.++..+....++...+.+|+
T Consensus        74 ~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi-~~a~~~~~~~~~~~~d~r~~i~~~D~~~~l~~~~~~yDv  151 (274)
T d1iy9a_          74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVI-EYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDV  151 (274)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHH-HHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEE
T ss_pred             CCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHH-HHHHHhChhhcccccCCCeEEEechHHHHHhhcCCCCCE
Confidence            4557999998754 4456677776664 787888887654 444443     21     134444555666666668999


Q ss_pred             EEEccCC----------cccHHHHHHhhccCCEEEEEcC
Q 021300          251 IIDTVSA----------VHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       251 v~d~~g~----------~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      |+--..+          ...++.+.+.|+++|.++.-..
T Consensus       152 Ii~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~~  190 (274)
T d1iy9a_         152 IMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD  190 (274)
T ss_dssp             EEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEecC
Confidence            8743321          1237789999999999987643

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.30  E-value=0.043  Score=45.59  Aligned_cols=37  Identities=32%  Similarity=0.355  Sum_probs=32.3

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      .....+|+|+|+|+.|+.++..++..|.+|+++...+
T Consensus        27 ~~~pkkV~IIGaG~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          27 TSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CSSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3556799999999999999999999999999998754

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=93.30  E-value=0.11  Score=43.90  Aligned_cols=71  Identities=21%  Similarity=0.177  Sum_probs=47.1

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh---hhHHHHHHHc---CCcEE-ecCCCHHHHHHHc--CCccEEEEcc
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERL---GADSF-LVSRDQDEMQAAM--GTMDGIIDTV  255 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~---~~~~~~~~~~---ga~~~-v~~~~~~~~~~~~--~~~d~v~d~~  255 (314)
                      +|||.|+ |.+|...+..+...|.+|+++++..   .......+.+   ....+ .|-.+.+.+.+..  .++|+||.++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHlA   81 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFA   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEECC
Confidence            6999998 9999999999999999999987521   1111111122   23322 2445566665553  3899999987


Q ss_pred             C
Q 021300          256 S  256 (314)
Q Consensus       256 g  256 (314)
                      +
T Consensus        82 a   82 (338)
T d1udca_          82 G   82 (338)
T ss_dssp             S
T ss_pred             C
Confidence            5

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.28  E-value=0.17  Score=41.60  Aligned_cols=94  Identities=14%  Similarity=0.078  Sum_probs=56.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-CC---------------cEEecCCCHHHHHHHc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-GA---------------DSFLVSRDQDEMQAAM  245 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~-ga---------------~~~v~~~~~~~~~~~~  245 (314)
                      ....+|||+|+|. |..+-.+++....++.++..+++-. ++++++ +.               -.++..+...+++ ..
T Consensus        71 ~~p~~vLiiG~G~-G~~~~~~l~~~~~~v~~VEiD~~Vi-~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~~~l~-~~  147 (276)
T d1mjfa_          71 PKPKRVLVIGGGD-GGTVREVLQHDVDEVIMVEIDEDVI-MVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIK-NN  147 (276)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSCCSEEEEEESCHHHH-HHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHH-HC
T ss_pred             CCCceEEEecCCc-hHHHHHHHHhCCceEEEecCCHHHH-HHHHHhhhhccchhhhhhccCCCCceEEEChHHHHHh-cc
Confidence            5567899998753 3344555554444787777776544 444433 21               1233333334554 35


Q ss_pred             CCccEEEEccCC----------cccHHHHHHhhccCCEEEEEc
Q 021300          246 GTMDGIIDTVSA----------VHPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       246 ~~~d~v~d~~g~----------~~~~~~~~~~l~~~G~~v~~G  278 (314)
                      +++|+|+--..+          ...+..+.+.|+++|.++.-+
T Consensus       148 ~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~  190 (276)
T d1mjfa_         148 RGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  190 (276)
T ss_dssp             CCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence            679997653322          123677889999999988754

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.25  E-value=0.13  Score=42.53  Aligned_cols=96  Identities=20%  Similarity=0.154  Sum_probs=58.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcC----------CcEEecCCCHHHHHHHcCCccE
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLG----------ADSFLVSRDQDEMQAAMGTMDG  250 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~g----------a~~~v~~~~~~~~~~~~~~~d~  250 (314)
                      ...++|||+|+|. |..+-.+++..+. +++++.-+++-. ++++++-          --.++..+....++...+.+|+
T Consensus        77 ~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv-~~a~~~~~~~~~~~~d~rv~i~~~Da~~~l~~~~~~yDv  154 (285)
T d2o07a1          77 PNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVI-QVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDV  154 (285)
T ss_dssp             SSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHH-HHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEE
T ss_pred             cCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHH-HHHHhhchhhccccCCCCceEEEccHHHHHhcCCCCCCE
Confidence            4557899998754 4455666666554 777777776544 4444331          1123333334555554557999


Q ss_pred             EEEccCC----------cccHHHHHHhhccCCEEEEEcC
Q 021300          251 IIDTVSA----------VHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       251 v~d~~g~----------~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      |+--.-+          ...+..+.+.|+++|.++.-+.
T Consensus       155 Ii~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~~  193 (285)
T d2o07a1         155 IITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGE  193 (285)
T ss_dssp             EEEECC-----------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEecc
Confidence            7743321          1236778889999999887643

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.24  E-value=0.16  Score=43.57  Aligned_cols=31  Identities=23%  Similarity=0.293  Sum_probs=27.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEe
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS  214 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~  214 (314)
                      |.+|||.|+ |.+|...+..+...|.+|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            689999998 9999999999999999999886

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=93.20  E-value=0.14  Score=41.66  Aligned_cols=74  Identities=18%  Similarity=0.267  Sum_probs=50.2

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhH------HHH--HHHcCCcEEe-cCCCHHHHHHHcCCccEEEEc
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK------SEA--IERLGADSFL-VSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~------~~~--~~~~ga~~~v-~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      .+|||.|+ |.+|...+..+...|.+|++++|.+...      ..+  .+..+.+.+. |..+.+...+...+.+.++.+
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi~~   83 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIST   83 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeeeec
Confidence            57999998 9999999999998999999999864321      111  1122343332 344455555566678888888


Q ss_pred             cCCc
Q 021300          255 VSAV  258 (314)
Q Consensus       255 ~g~~  258 (314)
                      .+..
T Consensus        84 ~~~~   87 (307)
T d1qyca_          84 VGSL   87 (307)
T ss_dssp             CCGG
T ss_pred             cccc
Confidence            7643

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=93.12  E-value=0.06  Score=38.79  Aligned_cols=36  Identities=14%  Similarity=0.187  Sum_probs=32.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      +.+++++|+|+|.+|+-.++..+.+|.+|.++.+.+
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             ccCCeEEEECCCHHHHHHHHHhhcCCCEEEEEEeec
Confidence            556899999999999999999999999999998764

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.10  E-value=0.61  Score=34.07  Aligned_cols=92  Identities=14%  Similarity=0.256  Sum_probs=56.5

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHcC-Cc-----EEecCCCHHHHHHHcCCccEEEEcc
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLG-AD-----SFLVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~g-a~-----~~v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      .+|.|+|| |.+|...+.++...+.  +++.++..+.+.+.+  .+. ++     ..+..  .....+...+.|+|+-+.
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~--Dl~~~~~~~~~~~~~~--~~~~~~~~~~aDivVita   76 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAA--DLSHIETRATVKGYLG--PEQLPDCLKGCDVVVIPA   76 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHH--HHTTSSSSCEEEEEES--GGGHHHHHTTCSEEEECC
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhH--HHhhhhhhcCCCeEEc--CCChHHHhCCCCEEEECC
Confidence            36889997 9999999999988775  677777765433222  232 11     11111  122334557899999998


Q ss_pred             CCcc---------------cHHHHHHh---hccCCEEEEEcCC
Q 021300          256 SAVH---------------PLMPLIGL---LKSQGKLVLVGAP  280 (314)
Q Consensus       256 g~~~---------------~~~~~~~~---l~~~G~~v~~G~~  280 (314)
                      |...               .+....+.   ..+.+.++.+..|
T Consensus        77 g~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvtNP  119 (144)
T d1mlda1          77 GVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNP  119 (144)
T ss_dssp             SCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSC
T ss_pred             CcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc
Confidence            8421               12222222   2678888888764

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=93.09  E-value=0.11  Score=39.69  Aligned_cols=95  Identities=20%  Similarity=0.226  Sum_probs=59.3

Q ss_pred             EEEEEcCChHHHHHHHHHHHCC---CeEEEEeCChhhHHHHHH--HcC-------CcE----------------EecCCC
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMG---VKVTVISTSPSKKSEAIE--RLG-------ADS----------------FLVSRD  237 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g---~~vi~v~~~~~~~~~~~~--~~g-------a~~----------------~v~~~~  237 (314)
                      +|.|.|-|.+|.++.+.+..+.   .+++.+-... ..+.++.  ++.       .+.                +...++
T Consensus         2 kIgINGfGRIGR~v~R~~~~~~~~~i~ivaINd~~-~~~~~ayLlkyDSvhG~~~~~i~~~~~~~~~ing~~I~~~~~~~   80 (172)
T d1rm4a1           2 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRN   80 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECTT-CHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCSC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCCEEEEEEcCCC-CHHHHHHHHhcCcccccccceeEecCCcceEECCEEEEEecCCC
Confidence            5788899999999998776543   3566555442 2333321  111       111                111223


Q ss_pred             HHHHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          238 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       238 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      +..+.+...++|+|+||+|.-.....+...|..|-+-|++..+.
T Consensus        81 p~~i~W~~~gvDiViEcTG~f~~~~~~~~hl~~GakkViiSAP~  124 (172)
T d1rm4a1          81 PVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPG  124 (172)
T ss_dssp             GGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSCEEESSCC
T ss_pred             hHHCChhhcCCCEEEecCceEccHHHHHHHHhcCCceEEeeccc
Confidence            33333434479999999998766888888898887667776654

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.05  E-value=0.077  Score=44.50  Aligned_cols=100  Identities=22%  Similarity=0.095  Sum_probs=54.1

Q ss_pred             hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhH--HHHHHHcCC-c-EEecCCCHHHHHHHcCCc
Q 021300          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKK--SEAIERLGA-D-SFLVSRDQDEMQAAMGTM  248 (314)
Q Consensus       174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~--~~~~~~~ga-~-~~v~~~~~~~~~~~~~~~  248 (314)
                      |+.+...+.+|++||-+|+| .|..++.+|++ |+ +|++++.++...  .+..++.+. + .-+...+...+....+.+
T Consensus        26 ai~~~~~~~~~~~VLDiGcG-~G~lsl~aa~~-Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~  103 (311)
T d2fyta1          26 FIYQNPHIFKDKVVLDVGCG-TGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKV  103 (311)
T ss_dssp             HHHHCGGGTTTCEEEEETCT-TSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCE
T ss_pred             HHHhccccCCcCEEEEECCC-CCHHHHHHHHc-CCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcCccccc
Confidence            34444446789999999986 46666666664 66 788888876532  122233342 1 112122211111122479


Q ss_pred             cEEEEcc-C----CcccHHH----HHHhhccCCEEE
Q 021300          249 DGIIDTV-S----AVHPLMP----LIGLLKSQGKLV  275 (314)
Q Consensus       249 d~v~d~~-g----~~~~~~~----~~~~l~~~G~~v  275 (314)
                      |+|+-.. +    ....+..    .-+.|+|+|+++
T Consensus       104 D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1         104 DVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             EEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             eEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence            9987522 2    1111223    335789999876

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.02  E-value=0.15  Score=36.76  Aligned_cols=29  Identities=24%  Similarity=0.429  Sum_probs=24.5

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEe
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVIS  214 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~  214 (314)
                      +|.|+|+ |-+|.+..++++..+.+++...
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~i   31 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKV   31 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEE
Confidence            5889997 9999999999998888776543

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.93  E-value=0.083  Score=37.93  Aligned_cols=34  Identities=18%  Similarity=0.200  Sum_probs=31.4

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      .++++|+|+|.+|+-++..++.+|.+|+++.+.+
T Consensus        22 pk~vvIvGgG~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcCCccHHHHHHHHhcCCcEEEEEeecc
Confidence            4789999999999999999999999999999874

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=92.92  E-value=0.067  Score=37.77  Aligned_cols=36  Identities=25%  Similarity=0.280  Sum_probs=31.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      +.+++++|+|+|.+|+-+++.++.+|.+|.++.+.+
T Consensus        19 ~~p~~vvIiGgG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          19 ALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCCeEEEECCCHHHHHHHHHHhhcccceEEEeeec
Confidence            334899999999999999999999999999988764

>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=92.84  E-value=0.18  Score=39.02  Aligned_cols=96  Identities=15%  Similarity=0.254  Sum_probs=60.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHCC-----CeEEEEeC---ChhhHHHHHHHcC------Cc---------------EEe---
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMG-----VKVTVIST---SPSKKSEAIERLG------AD---------------SFL---  233 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g-----~~vi~v~~---~~~~~~~~~~~~g------a~---------------~~v---  233 (314)
                      +|.|.|-|.+|+++.+.+-..+     .+++.+..   +.+....+.+--.      .+               .++   
T Consensus         4 kigINGFGRIGR~vlR~~~~~~~~~~~i~iv~Ind~~~~~~~~ayLlkyDSvhG~~~~~v~~~~~~~~~~~~~~~i~~g~   83 (190)
T d1k3ta1           4 KVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTLVVNGH   83 (190)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCBTTTEEEEEEEESCCCHHHHHHHHHEETTTEECSSCEEEECSSTTCSSCCEEEETTE
T ss_pred             EEEEECCChHHHHHHHHHHHcCCCCCCeEEEEEecCCCCHHHHHHHhhccccccCCCceEEEccCccccccccceEEcCc
Confidence            5788899999999988665432     25554433   2344444443110      00               111   


Q ss_pred             ------cCCCHHHHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300          234 ------VSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       234 ------~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                            ..++|..+.+..-++|+|+||+|.-.....+...+..|-+-|++..+.
T Consensus        84 ~i~~~~~~~~p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~  137 (190)
T d1k3ta1          84 RILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPA  137 (190)
T ss_dssp             EEEEEECCSCGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             eEEecccCCChhHCCHhhcCCcEEEEecccccccccchhhcccCcceeeeccCC
Confidence                  123344444444489999999998777788888998887777776654

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=92.80  E-value=0.059  Score=45.50  Aligned_cols=72  Identities=13%  Similarity=0.063  Sum_probs=47.4

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCcEEe-c-CCCHHHHHHHcCCccEEEEccCC
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFL-V-SRDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~ga~~~v-~-~~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      +|||.|+ |.+|...++.+...| .+|+++++.......+.+.-..+.+. | ....+..+....++|+|+.+++.
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~   77 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI   77 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCcccccccc
Confidence            6999998 999999998887777 58988887665544443222222222 2 12224444455579999998874

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.79  E-value=0.45  Score=39.98  Aligned_cols=103  Identities=17%  Similarity=0.088  Sum_probs=62.4

Q ss_pred             hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHH----------HcCC---cEEecCCCH-
Q 021300          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIE----------RLGA---DSFLVSRDQ-  238 (314)
Q Consensus       174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~----------~~ga---~~~v~~~~~-  238 (314)
                      .+.... +++++++|=+|+|. |..+.++|+..++ +++.++.++.....+.+          .+|.   ..-+...+. 
T Consensus       143 ~~~~~~-l~~~~~vlD~GcG~-G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~  220 (328)
T d1nw3a_         143 MIDEIK-MTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL  220 (328)
T ss_dssp             HHHHSC-CCTTCEEEEETCTT-SHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTT
T ss_pred             HHHHcC-CCCCCEEEEcCCCC-CHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECccc
Confidence            444444 79999999899874 7788899998887 79999988765433211          1221   111222221 


Q ss_pred             -HHHHHHcCCccEEEEccC-C-c---ccHHHHHHhhccCCEEEEEc
Q 021300          239 -DEMQAAMGTMDGIIDTVS-A-V---HPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       239 -~~~~~~~~~~d~v~d~~g-~-~---~~~~~~~~~l~~~G~~v~~G  278 (314)
                       ....+....+|+|+-..- . .   ..+....+.|++||++|..-
T Consensus       221 ~~~~~~~~~~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         221 SEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             SHHHHHHHHHCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             ccccccccCcceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence             111222224788774321 1 1   23566788899999998764

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.74  E-value=0.052  Score=38.97  Aligned_cols=37  Identities=22%  Similarity=0.246  Sum_probs=33.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS  218 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~  218 (314)
                      +.+++++|+|+|.+|+-+++.++.+|.+|.++.+.+.
T Consensus        23 ~~p~~~viiG~G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          23 EIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             SCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             ccCCeEEEEccchHHHHHHHHHHhcCCeEEEEEEccc
Confidence            4568999999999999999999999999999988753

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=92.73  E-value=0.25  Score=41.58  Aligned_cols=74  Identities=16%  Similarity=0.158  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHH-HHHHc-CCcEEe-cC-CCHHHHHHHcCCccEEEEccC
Q 021300          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSE-AIERL-GADSFL-VS-RDQDEMQAAMGTMDGIIDTVS  256 (314)
Q Consensus       183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~-~~~~~-ga~~~v-~~-~~~~~~~~~~~~~d~v~d~~g  256 (314)
                      +-.+|+|+|+ |.+|...+..+...|.+|++++|++..... ..... +++.+. |. ++.+.+..+..+.|.++....
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~   80 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT   80 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeecc
Confidence            3478999998 999999999999999999999997654321 11222 344332 22 234566677788888887654

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=92.71  E-value=0.29  Score=36.46  Aligned_cols=85  Identities=20%  Similarity=0.203  Sum_probs=54.7

Q ss_pred             EEEEEcCChHHHH-HHHHHHHC-CCeEEEE-eCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHH
Q 021300          186 HVGVVGLGGLGHV-AVKFAKAM-GVKVTVI-STSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM  262 (314)
Q Consensus       186 ~vlI~Gag~vG~~-a~~~a~~~-g~~vi~v-~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~  262 (314)
                      ++.|+|.|.+|.- .+...+.. +.+++.+ ++++++...+.++++...   ....+   ++...+|+|+-++.......
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~---~~~~~---~l~~~~D~V~I~tp~~~h~~   76 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY---ADSLS---SLAASCDAVFVHSSTASHFD   76 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB---CSSHH---HHHTTCSEEEECSCTTHHHH
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc---cccch---hhhhhcccccccccchhccc
Confidence            5789999999964 56666655 6677655 466677778888888652   22222   23356888888887654455


Q ss_pred             HHHHhhccCCEEEEE
Q 021300          263 PLIGLLKSQGKLVLV  277 (314)
Q Consensus       263 ~~~~~l~~~G~~v~~  277 (314)
                      .+..+|..+ +=+++
T Consensus        77 ~~~~al~~g-k~V~~   90 (164)
T d1tlta1          77 VVSTLLNAG-VHVCV   90 (164)
T ss_dssp             HHHHHHHTT-CEEEE
T ss_pred             ccccccccc-ceeec
Confidence            566666554 44444

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.62  E-value=0.23  Score=41.20  Aligned_cols=96  Identities=14%  Similarity=0.158  Sum_probs=59.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcC---------C-cEEecCCCHHHHHHHcC-Ccc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLG---------A-DSFLVSRDQDEMQAAMG-TMD  249 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~g---------a-~~~v~~~~~~~~~~~~~-~~d  249 (314)
                      ...++|||+|+|. |..+-.+++..+. ++.++.-+++-. ++++++-         . -.++..+....+....+ .||
T Consensus        79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi-~~~~~~f~~~~~~~~~~r~~i~~~Da~~~l~~~~~~~yD  156 (290)
T d1xj5a_          79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVV-DVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYD  156 (290)
T ss_dssp             SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHH-HHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEE
T ss_pred             CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHH-HHHHHhchhhhccccCCCcEEEEccHHHHHhhccccCcc
Confidence            4457899998654 4455667776665 677777776654 4444432         1 12333333456655544 799


Q ss_pred             EEEEccCC----------cccHHHHHHhhccCCEEEEEcC
Q 021300          250 GIIDTVSA----------VHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       250 ~v~d~~g~----------~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      +|+--..+          ...++.+.+.|+++|.++.-..
T Consensus       157 vIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~~  196 (290)
T d1xj5a_         157 AVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAE  196 (290)
T ss_dssp             EEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEecC
Confidence            87643322          2237789999999999988643

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.61  E-value=0.44  Score=34.51  Aligned_cols=71  Identities=15%  Similarity=0.191  Sum_probs=41.4

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHH-----cCCccEEEEccCC
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA-----MGTMDGIIDTVSA  257 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~-----~~~~d~v~d~~g~  257 (314)
                      +|.|.|+ |-+|...++..... +.+++...+..+....+ ..-++|.++|...|+...+.     ..+..+|+-++|-
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~-~~~~~DvvIDFS~p~~~~~~~~~~~~~~~~~ViGTTG~   78 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLL-TDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGF   78 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHH-HTTTCSEEEECCCTTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhh-ccccCCEEEEcccHHHHHHHHHHHHhcCCCEEEecccc
Confidence            5889997 99999988887765 56776655543333222 22345666665554322211     2355566655553

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.57  E-value=0.041  Score=45.31  Aligned_cols=33  Identities=15%  Similarity=0.385  Sum_probs=30.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS  218 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~  218 (314)
                      .|+|+|+|+.|++++..++..|.+|+++.+.++
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            489999999999999999999999999998753

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.52  E-value=0.071  Score=44.07  Aligned_cols=36  Identities=25%  Similarity=0.362  Sum_probs=31.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      ++..+|+|+|+|..|+.|+..++..|.+|+++...+
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            556789999999999999999999999999988653

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.47  E-value=0.096  Score=41.41  Aligned_cols=96  Identities=15%  Similarity=0.134  Sum_probs=62.5

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC---Cc--EEecCCCHHHHHHHcCCccEEEEcc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---AD--SFLVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g---a~--~~v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      ..++.+||=+|+|. |..+..+++..+.++++++.++...+.+.+.+.   ..  .++. .+...+....+.||+|+..-
T Consensus        58 ~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~-~d~~~~~~~~~~fD~I~~~~  135 (222)
T d2ex4a1          58 KTGTSCALDCGAGI-GRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFC-CGLQDFTPEPDSYDVIWIQW  135 (222)
T ss_dssp             CCCCSEEEEETCTT-THHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEE-CCGGGCCCCSSCEEEEEEES
T ss_pred             CCCCCEEEEeccCC-CHhhHHHHHhcCCEEEEeecCHHHhhcccccccccccccccccc-cccccccccccccccccccc
Confidence            46778898899865 777777777667789999999888766655443   21  2222 12111111234699988743


Q ss_pred             C-----Cc---ccHHHHHHhhccCCEEEEEc
Q 021300          256 S-----AV---HPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       256 g-----~~---~~~~~~~~~l~~~G~~v~~G  278 (314)
                      .     ..   ..+..+.+.|+++|.+++.-
T Consensus       136 ~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~  166 (222)
T d2ex4a1         136 VIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD  166 (222)
T ss_dssp             CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccchhhhhhhHHHHHHHhcCCcceEEEEE
Confidence            2     11   24677888999999998873

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=92.34  E-value=0.14  Score=36.87  Aligned_cols=86  Identities=14%  Similarity=0.210  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCh-----------HHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHc--CCcc
Q 021300          183 PGMHVGVVGLGG-----------LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM--GTMD  249 (314)
Q Consensus       183 ~g~~vlI~Gag~-----------vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~--~~~d  249 (314)
                      .-.+|||+|+|+           .+.-++..+|..|++++.+..+++.. ..-..+.-..++.+=..+.+.++.  +..|
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TV-std~d~aD~lYfePlt~e~v~~Ii~~E~pd   84 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATI-MTDPEMADATYIEPIHWEVVRKIIEKERPD   84 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCG-GGCGGGSSEEECSCCCHHHHHHHHHHHCCS
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhh-hcChhhcceeeeecCCHHHHHHHHHHhCcC
Confidence            457899999876           23444555556799999999998765 111112223344455566666654  3789


Q ss_pred             EEEEccCCcccHHHHHHhhc
Q 021300          250 GIIDTVSAVHPLMPLIGLLK  269 (314)
Q Consensus       250 ~v~d~~g~~~~~~~~~~~l~  269 (314)
                      .++-..|+...++.+.++.+
T Consensus        85 ~il~~~GGQtalnla~~L~~  104 (127)
T d1a9xa3          85 AVLPTMGGQTALNCALELER  104 (127)
T ss_dssp             EEECSSSHHHHHHHHHHHHH
T ss_pred             CeEEEeeeehHhHHHHHHHH
Confidence            99988888765666666544

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.32  E-value=0.043  Score=41.95  Aligned_cols=99  Identities=14%  Similarity=0.079  Sum_probs=64.7

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH--HcCCcEE--ecCCCHHHHHHHcCCccEEEEccC
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE--RLGADSF--LVSRDQDEMQAAMGTMDGIIDTVS  256 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~--~~ga~~~--v~~~~~~~~~~~~~~~d~v~d~~g  256 (314)
                      -.|.+++|+|. ..+|.=...++...|++|+..............  ..-+...  +....++.+++....+|+++-++|
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsavG  106 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVP  106 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECCC
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEEccC
Confidence            57899999996 788998888888899999876654321100000  0011111  112335667777778999999999


Q ss_pred             CcccHHHHHHhhccCCEEEEEcCCC
Q 021300          257 AVHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       257 ~~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      .+. +.---+.+++|..++.+|...
T Consensus       107 ~p~-~~i~~d~ik~GavvIDvGi~~  130 (171)
T d1edza1         107 SEN-YKFPTEYIKEGAVCINFACTK  130 (171)
T ss_dssp             CTT-CCBCTTTSCTTEEEEECSSSC
T ss_pred             CCc-cccChhhcccCceEeeccccc
Confidence            865 222335678888999999753

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=92.28  E-value=0.098  Score=39.86  Aligned_cols=96  Identities=18%  Similarity=0.288  Sum_probs=60.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCh--hhHHHHHHHcC-------Cc---------------EEecCCCHHH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSP--SKKSEAIERLG-------AD---------------SFLVSRDQDE  240 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~--~~~~~~~~~~g-------a~---------------~~v~~~~~~~  240 (314)
                      +|.|.|-|.+|+++...+... ..+++.+-+..  +....+.+ +.       .+               .+....+++.
T Consensus         3 kIgINGfGRIGR~v~R~~l~~~~~~ivaINd~~d~~~~ayll~-yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p~~   81 (171)
T d3cmco1           3 KVGINGFGRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLK-YDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPEN   81 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHH-EETTTEECSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHhhhhc-ccccCCcccccccccCCCEEeCCcceeeEecCCHHH
Confidence            577889999999988877655 35776665432  22223322 11       00               0112233343


Q ss_pred             HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (314)
Q Consensus       241 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~  282 (314)
                      +.+..-++|+|+||+|.-.+.+.+...|..+-+-|++..+..
T Consensus        82 i~W~~~~vDiViEcTG~f~t~~~~~~hl~~gakkViiSap~~  123 (171)
T d3cmco1          82 LAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAK  123 (171)
T ss_dssp             CCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB
T ss_pred             ccccccCCcEEEEecCccCCHHHHHHHHhCCCceEEEecccc
Confidence            334444799999999988778888888988876777766653

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=92.27  E-value=0.15  Score=41.28  Aligned_cols=96  Identities=13%  Similarity=0.063  Sum_probs=63.1

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEec--CCCHHHHHHHcCCccEEEEccCCc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV--SRDQDEMQAAMGTMDGIIDTVSAV  258 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~--~~~~~~~~~~~~~~d~v~d~~g~~  258 (314)
                      ..++.+||=+|+|. |..+..+++....+|+.++.++...+.+.+.+.....+.  ..+........+.||+|+-.-.-.
T Consensus        91 ~~~~~~vLD~GcG~-G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I~~~~vl~  169 (254)
T d1xtpa_          91 GHGTSRALDCGAGI-GRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAI  169 (254)
T ss_dssp             TCCCSEEEEETCTT-THHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGG
T ss_pred             CCCCCeEEEecccC-ChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEccccccccCCCccceEEeecccc
Confidence            35677888889875 778888887666689999999988877766665322111  122111111124699987643211


Q ss_pred             --------ccHHHHHHhhccCCEEEEE
Q 021300          259 --------HPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       259 --------~~~~~~~~~l~~~G~~v~~  277 (314)
                              ..+..+.+.|+++|.+++.
T Consensus       170 hl~d~d~~~~l~~~~~~LkpgG~iii~  196 (254)
T d1xtpa_         170 YLTDADFVKFFKHCQQALTPNGYIFFK  196 (254)
T ss_dssp             GSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccchhhhHHHHHHHHHhcCCCcEEEEE
Confidence                    2367788899999998875

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=92.08  E-value=0.072  Score=40.46  Aligned_cols=30  Identities=23%  Similarity=0.441  Sum_probs=27.3

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      |+|+|+|+.|+.|+..+..+|.+++++.+.
T Consensus         4 ViIIGgGpaGl~AAi~aar~G~~v~iie~~   33 (184)
T d1fl2a1           4 VLIVGSGPAGAAAAIYSARKGIRTGLMGER   33 (184)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECcCHHHHHHHHHHHHcCCeEEEEEEe
Confidence            788999999999999999999999998753

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.07  E-value=0.085  Score=42.61  Aligned_cols=32  Identities=25%  Similarity=0.330  Sum_probs=28.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCh
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP  217 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~  217 (314)
                      +|+|+|+|+.|++++..++..|. .|.++.+.+
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            58999999999999999999996 788888765

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=92.06  E-value=0.15  Score=41.11  Aligned_cols=32  Identities=38%  Similarity=0.655  Sum_probs=27.0

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeC
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVIST  215 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~  215 (314)
                      ..+|+|+|+|++|..++..+...|. ++++++.
T Consensus        30 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          30 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCeEEEECC
Confidence            3689999999999999999999998 6666653

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=91.98  E-value=0.064  Score=42.51  Aligned_cols=32  Identities=28%  Similarity=0.366  Sum_probs=28.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCh
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP  217 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~  217 (314)
                      +|+|+|+|+.|+.++..++..|. +|+++.+.+
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            48999999999999999999997 698888764

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=91.97  E-value=0.092  Score=39.38  Aligned_cols=35  Identities=37%  Similarity=0.482  Sum_probs=29.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCh
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSP  217 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~  217 (314)
                      .|.+|+|+|+|.+|+.+++.++.++  .+|+++.+.+
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4789999999999999999988876  4788877654

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=91.91  E-value=0.13  Score=40.66  Aligned_cols=94  Identities=18%  Similarity=0.107  Sum_probs=57.0

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEcc-----
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTV-----  255 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~-----  255 (314)
                      ...+.+||=+|+|. |..+..+++ .|.+|+.++.+++..+.+.+.+.-..-+...+.+.. ...+.||+|+-.-     
T Consensus        18 ~~~~~~VLDiGcG~-G~~~~~l~~-~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~-~~~~~fD~I~~~~vleh~   94 (225)
T d2p7ia1          18 FFRPGNLLELGSFK-GDFTSRLQE-HFNDITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHI   94 (225)
T ss_dssp             GCCSSCEEEESCTT-SHHHHHHTT-TCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGC
T ss_pred             hCCCCcEEEEeCCC-cHHHHHHHH-cCCeEEEEeCcHHHhhhhhccccccccccccccccc-ccccccccccccceeEec
Confidence            34567888899865 666665554 578999999999888777655543211222222211 1235799987422     


Q ss_pred             CCc-ccHHHHH-HhhccCCEEEEE
Q 021300          256 SAV-HPLMPLI-GLLKSQGKLVLV  277 (314)
Q Consensus       256 g~~-~~~~~~~-~~l~~~G~~v~~  277 (314)
                      .+. ..+..+. ++|+++|.++..
T Consensus        95 ~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          95 DDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             SSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             CCHHHHHHHHHHHhcCCCceEEEE
Confidence            111 1244455 578999998874

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.91  E-value=0.06  Score=44.12  Aligned_cols=95  Identities=19%  Similarity=0.099  Sum_probs=59.1

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHH---HHcCC-c--EEecCCCHHHHHHHcCCccEEEEc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI---ERLGA-D--SFLVSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~---~~~ga-~--~~v~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      +++|++||-.++|. |.+++.+|+...++|++++.++...+.+.   +..+. +  .++..+..+..  ..+.+|.|+-.
T Consensus       105 ~~~g~~VlD~~aG~-G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~--~~~~~D~Ii~~  181 (260)
T d2frna1         105 AKPDELVVDMFAGI-GHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP--GENIADRILMG  181 (260)
T ss_dssp             CCTTCEEEETTCTT-TTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC--CCSCEEEEEEC
T ss_pred             cCCccEEEECcceE-cHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhc--cCCCCCEEEEC
Confidence            68999999887643 55566677765569999999988765553   23343 2  22222211110  12358976643


Q ss_pred             -c-CCcccHHHHHHhhccCCEEEEEc
Q 021300          255 -V-SAVHPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       255 -~-g~~~~~~~~~~~l~~~G~~v~~G  278 (314)
                       . .+...+..+++.+++||.+....
T Consensus       182 ~p~~~~~~l~~a~~~l~~gG~lh~~~  207 (260)
T d2frna1         182 YVVRTHEFIPKALSIAKDGAIIHYHN  207 (260)
T ss_dssp             CCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCCchHHHHHHHHhhcCCCCEEEEEe
Confidence             2 33445778999999999876554

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=91.87  E-value=0.27  Score=40.66  Aligned_cols=35  Identities=20%  Similarity=0.407  Sum_probs=31.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      -.|.+|+|-|.|.+|..+++++...|++++.+.+.
T Consensus        34 L~gktvaIqGfGnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          34 FGDKTFAVQGFGNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcc
Confidence            36789999999999999999999999999988753

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.71  E-value=0.085  Score=44.62  Aligned_cols=93  Identities=22%  Similarity=0.139  Sum_probs=50.5

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChh--hHHHHHHHcCC--cEEecCCCHHHHHHHcCCccEEEEcc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS--KKSEAIERLGA--DSFLVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~--~~~~~~~~~ga--~~~v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      +.+|++||-+|+|. |..+..+++ .|+ +|++++.++.  ..++..++.+.  ...+...+...+....+.+|+|+-..
T Consensus        36 ~~~~~~VLDlGcGt-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~~~~~~D~i~se~  113 (328)
T d1g6q1_          36 LFKDKIVLDVGCGT-GILSMFAAK-HGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEW  113 (328)
T ss_dssp             HHTTCEEEEETCTT-SHHHHHHHH-TCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECC
T ss_pred             cCCcCEEEEeCCCC-CHHHHHHHH-hCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeehhhccCcccceeEEEEEe
Confidence            46789999999864 556555555 566 7888887752  12233334442  22222222222111234699887632


Q ss_pred             -C----Ccc----cHHHHHHhhccCCEEE
Q 021300          256 -S----AVH----PLMPLIGLLKSQGKLV  275 (314)
Q Consensus       256 -g----~~~----~~~~~~~~l~~~G~~v  275 (314)
                       +    ...    .+...-++|+|+|+++
T Consensus       114 ~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         114 MGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             CBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             cceeeccchhHHHHHHHHHhccCCCeEEE
Confidence             1    111    1333347889999874

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=91.69  E-value=0.11  Score=41.55  Aligned_cols=92  Identities=15%  Similarity=0.099  Sum_probs=57.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcEEecCCCHHHHHHHcCCccEEEEccCCc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~  258 (314)
                      .++.+||=+|+|. |..+..+++ .|.+++.++.+++..+.+.++   .+...-+...+...+ ...+.||+|+-..+.-
T Consensus        36 ~~~~~vLDiGCG~-G~~~~~l~~-~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~i~~~~~~~  112 (246)
T d1y8ca_          36 LVFDDYLDLACGT-GNLTENLCP-KFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNL-NINRKFDLITCCLDST  112 (246)
T ss_dssp             CCTTEEEEETCTT-STTHHHHGG-GSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGC-CCSCCEEEEEECTTGG
T ss_pred             CCCCeEEEEeCcC-CHHHHHHHH-hCCccEeeccchhhhhhccccccccCccceeeccchhhh-cccccccccceeeeee
Confidence            4567899899864 666666666 478999999998876555433   333221222222111 1234799998532211


Q ss_pred             ----------ccHHHHHHhhccCCEEEE
Q 021300          259 ----------HPLMPLIGLLKSQGKLVL  276 (314)
Q Consensus       259 ----------~~~~~~~~~l~~~G~~v~  276 (314)
                                ..+..+.+.|++||.++.
T Consensus       113 ~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         113 NYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             GGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             eccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence                      136678888999999885

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=91.63  E-value=0.32  Score=38.38  Aligned_cols=91  Identities=16%  Similarity=0.170  Sum_probs=54.8

Q ss_pred             EEEEEcCChHHH-HHHHHHHHC-CCeEEE-EeCChhhHHHHHHHcCCc--EEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          186 HVGVVGLGGLGH-VAVKFAKAM-GVKVTV-ISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       186 ~vlI~Gag~vG~-~a~~~a~~~-g~~vi~-v~~~~~~~~~~~~~~ga~--~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      +|.|+|+|.+|. ..+...+.. +.+++. +++++++.+.+.++++.+  .+..+.+.+.+. ....+|+|+-++.....
T Consensus        35 riaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d~~ell-~~~~iD~V~I~tp~~~H  113 (221)
T d1h6da1          35 GYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIA-KDPKIDAVYIILPNSLH  113 (221)
T ss_dssp             EEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGG-GCTTCCEEEECSCGGGH
T ss_pred             EEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCchhhhc-ccccceeeeeccchhhh
Confidence            577889999986 344444444 667774 456777888888888853  233344432211 12368888887776554


Q ss_pred             HHHHHHhhccCCEEEEEc
Q 021300          261 LMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       261 ~~~~~~~l~~~G~~v~~G  278 (314)
                      ...+..+|.. |+=+++-
T Consensus       114 ~~~~~~al~~-gk~v~~E  130 (221)
T d1h6da1         114 AEFAIRAFKA-GKHVMCE  130 (221)
T ss_dssp             HHHHHHHHHT-TCEEEEC
T ss_pred             hhHHHHhhhc-chhhhcC
Confidence            5556666654 3444443

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.59  E-value=0.16  Score=37.62  Aligned_cols=35  Identities=23%  Similarity=0.384  Sum_probs=29.6

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKK  220 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~  220 (314)
                      +|-|+|.|.+|...+.-++..|.++++..+.+.+.
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~~v~~~~~~~~~~   36 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPS   36 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHH
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCCeEEEEcCchhHH
Confidence            57889999999999999999999988887665544

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.57  E-value=0.2  Score=41.62  Aligned_cols=96  Identities=16%  Similarity=0.111  Sum_probs=58.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcC-C---------cEEecCCCHHHHHHHcCCccE
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLG-A---------DSFLVSRDQDEMQAAMGTMDG  250 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~g-a---------~~~v~~~~~~~~~~~~~~~d~  250 (314)
                      ....+|||+|+|. |..+-.+++..+. ++.++..+++-. ++++++- .         -.++..+...++++..+.||+
T Consensus        88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi-~~a~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDv  165 (295)
T d1inla_          88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVI-EAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDV  165 (295)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHH-HHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEE
T ss_pred             CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHH-HHHHHHHHhhcccccCCCcEEEhhhHHHHHhcCCCCCCE
Confidence            3457899998744 3445666776654 777888887654 4444432 1         133333333455444557999


Q ss_pred             EEEccC-----------CcccHHHHHHhhccCCEEEEEcC
Q 021300          251 IIDTVS-----------AVHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       251 v~d~~g-----------~~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      |+--..           +...+..+.+.|+++|.++.-..
T Consensus       166 Ii~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~~  205 (295)
T d1inla_         166 IIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE  205 (295)
T ss_dssp             EEEEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEecC
Confidence            774321           11236778999999999887643

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=91.56  E-value=0.087  Score=42.48  Aligned_cols=33  Identities=21%  Similarity=0.285  Sum_probs=29.5

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCeEEEEeCChhh
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK  219 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~  219 (314)
                      |+|+|+|+.|++++..+...|.+|.++++.+.-
T Consensus         7 ViIIGaG~aGl~aA~~la~~G~~V~vlEk~~~~   39 (253)
T d2gqfa1           7 NIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKI   39 (253)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence            788999999999999999999999999987643

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=91.56  E-value=0.043  Score=42.29  Aligned_cols=34  Identities=18%  Similarity=0.252  Sum_probs=29.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      ++..|+|+|+|+.|+.|+..+..+|.+++++.+.
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~~v~iie~~   37 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM   37 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCCceEEEEee
Confidence            4567999999999999999999999999998754

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.52  E-value=0.31  Score=40.97  Aligned_cols=99  Identities=24%  Similarity=0.211  Sum_probs=60.5

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHH---HHcCCc--EEecCCC-HHHHHHH---cCCccE
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAI---ERLGAD--SFLVSRD-QDEMQAA---MGTMDG  250 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~---~~~ga~--~~v~~~~-~~~~~~~---~~~~d~  250 (314)
                      +++|++||=+++|. |..++..++. |+ +|+.++.++...+.+.   +..|..  .-+...+ .+++..+   ...||+
T Consensus       143 ~~~g~~VLDl~~g~-G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~fD~  220 (324)
T d2as0a2         143 VQPGDRVLDVFTYT-GGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDI  220 (324)
T ss_dssp             CCTTCEEEETTCTT-THHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred             cCCCCeeecccCcc-cchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCCCCc
Confidence            58899998876632 4444555554 65 8999999987664443   234532  1222333 3444333   347999


Q ss_pred             EEEccCCc---------------ccHHHHHHhhccCCEEEEEcCCC
Q 021300          251 IIDTVSAV---------------HPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       251 v~d~~g~~---------------~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      |+-.....               ..+..++++|++||.++.+....
T Consensus       221 Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s~  266 (324)
T d2as0a2         221 VVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ  266 (324)
T ss_dssp             EEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred             hhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence            88643311               13566788999999999987543

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=91.51  E-value=0.12  Score=41.73  Aligned_cols=96  Identities=17%  Similarity=0.108  Sum_probs=59.5

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc-EE-ecCCCHHHHH-HHcCCccEEEEc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD-SF-LVSRDQDEMQ-AAMGTMDGIIDT  254 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~-~~-v~~~~~~~~~-~~~~~~d~v~d~  254 (314)
                      ++++++||=+|+|. |..+..+++....+++.++.+++..+.+.++.   +.. .+ +-..+..... ...+.||+|+-.
T Consensus        22 ~~~~~~VLDlGCG~-G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~~~fD~V~~~  100 (252)
T d1ri5a_          22 TKRGDSVLDLGCGK-GGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ  100 (252)
T ss_dssp             CCTTCEEEEETCTT-TTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred             CCCcCEEEEecccC-cHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcccccccceEEEEc
Confidence            47899999999865 55667777765568999999998876665432   321 21 1111110000 112369998764


Q ss_pred             cCCc----------ccHHHHHHhhccCCEEEEE
Q 021300          255 VSAV----------HPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       255 ~g~~----------~~~~~~~~~l~~~G~~v~~  277 (314)
                      -.-.          ..+..+.+.|++||+++..
T Consensus       101 ~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_         101 FSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             SCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             ceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            3322          1345577889999998764

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=91.47  E-value=0.091  Score=41.99  Aligned_cols=32  Identities=28%  Similarity=0.277  Sum_probs=28.3

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCeEEEEeCChh
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS  218 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~  218 (314)
                      |+|+|+|+.|++++..+...|.+|+++++.+.
T Consensus         5 ViIIGaG~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            78899999999999888889999999987643

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.45  E-value=0.24  Score=38.53  Aligned_cols=38  Identities=26%  Similarity=0.359  Sum_probs=33.6

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA  223 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~  223 (314)
                      +|.|+|.|-+|+..+..+...|.+|++++.++++.+.+
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEECCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            58899999999998888888999999999998877666

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.44  E-value=0.69  Score=34.93  Aligned_cols=89  Identities=25%  Similarity=0.252  Sum_probs=65.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHH
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM  262 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~  262 (314)
                      ++.+|.|+|=|+=|.+.++-+|-.|.+|++-.+...+..+.+++-|.+..       .+.+...+.|+|.-.+.++. -.
T Consensus        15 k~k~IaViGYGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v~-------~~~eA~~~aDiim~L~PD~~-q~   86 (182)
T d1np3a2          15 QGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA-------DVKTAVAAADVVMILTPDEF-QG   86 (182)
T ss_dssp             HTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE-------CHHHHHHTCSEEEECSCHHH-HH
T ss_pred             CCCEEEEEeeCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhccccc-------cHHHHhhhcCeeeeecchHH-HH
Confidence            46789999999999999999999999999988887666666777787653       33455667999998887653 33


Q ss_pred             HHH-----HhhccCCEEEEEcC
Q 021300          263 PLI-----GLLKSQGKLVLVGA  279 (314)
Q Consensus       263 ~~~-----~~l~~~G~~v~~G~  279 (314)
                      ..+     ..|+++-.+.+...
T Consensus        87 ~vy~~~I~p~lk~g~~L~FaHG  108 (182)
T d1np3a2          87 RLYKEEIEPNLKKGATLAFAHG  108 (182)
T ss_dssp             HHHHHHTGGGCCTTCEEEESCC
T ss_pred             HHHHHhhhhhcCCCcEEEEecc
Confidence            333     34566666666544

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.32  E-value=0.14  Score=36.49  Aligned_cols=36  Identities=17%  Similarity=0.157  Sum_probs=32.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      +.+.+++|+|+|.+|+-++..+..+|.+|.++.+.+
T Consensus        30 ~~~~~vvIiGgG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          30 ENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             hcCCcEEEECCcHHHHHHHHHhhcccceEEEEeccc
Confidence            455789999999999999999999999999998764

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=91.32  E-value=1.3  Score=32.13  Aligned_cols=70  Identities=16%  Similarity=0.195  Sum_probs=45.4

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHc-------CCcEEecCCCHHHHHHHcCCccEEEEcc
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERL-------GADSFLVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~-------ga~~~v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      .+|.|+|+|.+|..++..+...+.  ++++++.++++.+..+..+       +...+....+.    +...+.|+|+-+.
T Consensus         2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~----~~~~daDvVVita   77 (143)
T d1llda1           2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP----EICRDADMVVITA   77 (143)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG----GGGTTCSEEEECC
T ss_pred             CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCH----HHhhCCcEEEEec
Confidence            578899999999999888887775  7888887776543222212       12233222222    2235689999999


Q ss_pred             CCc
Q 021300          256 SAV  258 (314)
Q Consensus       256 g~~  258 (314)
                      |..
T Consensus        78 G~~   80 (143)
T d1llda1          78 GPR   80 (143)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            854

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=91.15  E-value=0.076  Score=43.06  Aligned_cols=32  Identities=25%  Similarity=0.382  Sum_probs=28.9

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      +|+|+|+|..|+.++..++..|.+|+++...+
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            58999999999999999999999999998753

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=91.15  E-value=0.09  Score=41.16  Aligned_cols=30  Identities=37%  Similarity=0.391  Sum_probs=27.5

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      |+|+|+|+.|+.++..+..+|.+|+++...
T Consensus         6 vvVIGgGpaGl~aA~~aa~~G~kV~vie~~   35 (221)
T d1dxla1           6 VVIIGGGPGGYVAAIKAAQLGFKTTCIEKR   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCcEEEEEec
Confidence            778899999999999999999999999865

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=91.15  E-value=0.13  Score=43.21  Aligned_cols=34  Identities=24%  Similarity=0.272  Sum_probs=30.7

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      ..+|+|+|||..|+.++..++..|.+|.++..++
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCCCEEEEECCC
Confidence            4689999999999999999998899999998775

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=91.14  E-value=0.12  Score=38.68  Aligned_cols=73  Identities=16%  Similarity=0.162  Sum_probs=46.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHc-------CCc-EEecCCCHHHHHHHcCCccEEE
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERL-------GAD-SFLVSRDQDEMQAAMGTMDGII  252 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~-------ga~-~~v~~~~~~~~~~~~~~~d~v~  252 (314)
                      +.-.+|.|+|+|.+|...+.+++..+. ++++++.++++.+..+..+       +.. .+....   ...+...+.|+|+
T Consensus         5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~---~~~~~~~~adiVv   81 (154)
T d1pzga1           5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEY---SYEAALTGADCVI   81 (154)
T ss_dssp             SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEEC---SHHHHHTTCSEEE
T ss_pred             cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccC---chhhhhcCCCeEE
Confidence            455789999999999888877777664 8888877765443332222       211 111111   1223456899999


Q ss_pred             EccCC
Q 021300          253 DTVSA  257 (314)
Q Consensus       253 d~~g~  257 (314)
                      -+.|.
T Consensus        82 itag~   86 (154)
T d1pzga1          82 VTAGL   86 (154)
T ss_dssp             ECCSC
T ss_pred             Eeccc
Confidence            98863

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=91.03  E-value=0.15  Score=41.20  Aligned_cols=96  Identities=23%  Similarity=0.206  Sum_probs=57.4

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHH---HHHcCC-cEE-ecCCCHHHHHHHcCCccEEEE
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEA---IERLGA-DSF-LVSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~---~~~~ga-~~~-v~~~~~~~~~~~~~~~d~v~d  253 (314)
                      .+....+||=+|+|. |..+..+++.. +.++++++. ++..+.+   .++.+. +.+ +...+  .......++|+|+-
T Consensus        77 d~~~~~~VLDvGcG~-G~~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~D--~~~~~~~~~D~v~~  152 (253)
T d1tw3a2          77 DWTNVRHVLDVGGGK-GGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGD--FFEPLPRKADAIIL  152 (253)
T ss_dssp             CCTTCSEEEEETCTT-SHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECC--TTSCCSSCEEEEEE
T ss_pred             CCccCCEEEEeCCCC-CHHHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcccchhhcccc--chhhcccchhheee
Confidence            356778888888864 77888999887 568877775 3333222   223342 211 11122  11122346898875


Q ss_pred             ccC-----Cc---ccHHHHHHhhccCCEEEEEcC
Q 021300          254 TVS-----AV---HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       254 ~~g-----~~---~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      ..-     ..   ..+..+.+.|+|||++++.-.
T Consensus       153 ~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         153 SFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             ESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             ccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence            422     11   236778899999999998743

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=90.93  E-value=1.7  Score=32.16  Aligned_cols=95  Identities=14%  Similarity=0.229  Sum_probs=59.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHc-------CCcEEecCCCHHHHHHHcCCccEEE
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERL-------GADSFLVSRDQDEMQAAMGTMDGII  252 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~-------ga~~~v~~~~~~~~~~~~~~~d~v~  252 (314)
                      .+..+|.|+|+|.+|..++..+...|.  ++++++.+++..+..+..+       +...++...+.    +...+.|+|+
T Consensus        18 ~~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~----~~~~~adiVV   93 (160)
T d1i0za1          18 VPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY----SVTANSKIVV   93 (160)
T ss_dssp             CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG----GGGTTCSEEE
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch----hhcccccEEE
Confidence            456799999999999999999998876  7888887766543332222       12222223322    2245799999


Q ss_pred             EccCCcc---------------cHHHHHHh---hccCCEEEEEcCC
Q 021300          253 DTVSAVH---------------PLMPLIGL---LKSQGKLVLVGAP  280 (314)
Q Consensus       253 d~~g~~~---------------~~~~~~~~---l~~~G~~v~~G~~  280 (314)
                      -++|...               .+....+.   ..++|.++.+..|
T Consensus        94 itAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvtNP  139 (160)
T d1i0za1          94 VTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSNP  139 (160)
T ss_dssp             ECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             EecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCc
Confidence            9988431               12222222   3567888887654

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=90.87  E-value=1.3  Score=33.26  Aligned_cols=91  Identities=21%  Similarity=0.280  Sum_probs=58.9

Q ss_pred             EEEEEcCChHHHH-HHHHHHHCC--CeEEE-EeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300          186 HVGVVGLGGLGHV-AVKFAKAMG--VKVTV-ISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (314)
Q Consensus       186 ~vlI~Gag~vG~~-a~~~a~~~g--~~vi~-v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~  261 (314)
                      ++.|+|+|..|.- .+...+..+  .+++. .++++++.+.+.++++...++  .+.+.+- ....+|+|+-++......
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~--~~~~ell-~~~~id~v~I~tp~~~h~   81 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF--DSYEELL-ESGLVDAVDLTLPVELNL   81 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE--SCHHHHH-HSSCCSEEEECCCGGGHH
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccccccee--eeeeccc-cccccceeeccccccccc
Confidence            5789999999964 566666543  36664 456677777778888876654  3322211 124699999888776556


Q ss_pred             HHHHHhhccCCEEEEEcCC
Q 021300          262 MPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       262 ~~~~~~l~~~G~~v~~G~~  280 (314)
                      ..+..++.. |+=|++-.|
T Consensus        82 ~~~~~al~~-gk~V~~EKP   99 (181)
T d1zh8a1          82 PFIEKALRK-GVHVICEKP   99 (181)
T ss_dssp             HHHHHHHHT-TCEEEEESS
T ss_pred             ccccccccc-chhhhcCCC
Confidence            666666665 466666443

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.76  E-value=0.41  Score=40.11  Aligned_cols=73  Identities=15%  Similarity=0.108  Sum_probs=47.4

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh----hHHHHH--HHcCCcEE-ecCCCHHHHHHHc--CCccEEEEc
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS----KKSEAI--ERLGADSF-LVSRDQDEMQAAM--GTMDGIIDT  254 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~----~~~~~~--~~~ga~~~-v~~~~~~~~~~~~--~~~d~v~d~  254 (314)
                      +.|||.|+ |.+|...+..+...|.+|+++++...    ......  ..-+...+ .|-.+.+.+.++.  .++|+||.+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            46889998 99999999999889999998864221    111111  11123322 3445666665543  389999998


Q ss_pred             cCC
Q 021300          255 VSA  257 (314)
Q Consensus       255 ~g~  257 (314)
                      ++.
T Consensus        82 Aa~   84 (347)
T d1z45a2          82 AGL   84 (347)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            874

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=90.69  E-value=0.24  Score=41.97  Aligned_cols=105  Identities=16%  Similarity=0.159  Sum_probs=70.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHH-HCCC-eEEEEeCChhhHHHHHHHcCCc---EEecCCCHHHHHHHcCCccEEEEccC
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAK-AMGV-KVTVISTSPSKKSEAIERLGAD---SFLVSRDQDEMQAAMGTMDGIIDTVS  256 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~-~~g~-~vi~v~~~~~~~~~~~~~~ga~---~~v~~~~~~~~~~~~~~~d~v~d~~g  256 (314)
                      +...++.|+|+|..+...++... .++. ++.++.+++++.+++++++...   .+....   .+.+...+.|+|+-++.
T Consensus       126 ~da~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~---s~~eav~~ADIi~t~Ta  202 (340)
T d1x7da_         126 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRAS---SVAEAVKGVDIITTVTA  202 (340)
T ss_dssp             TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECS---SHHHHHTTCSEEEECCC
T ss_pred             cCCceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecC---CHHHHHhcCCceeeccc
Confidence            55678899999999987777554 5666 8889999998888887766421   222222   34456678999998775


Q ss_pred             Cccc-HHHHHHhhccCCEEEEEcCCC-CCcccchh
Q 021300          257 AVHP-LMPLIGLLKSQGKLVLVGAPE-KPLELPAF  289 (314)
Q Consensus       257 ~~~~-~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~  289 (314)
                      +... .---.+.++++-.+..+|... +..+++..
T Consensus       203 s~s~~Pv~~~~~l~pG~hI~aiGs~~p~~~Eld~~  237 (340)
T d1x7da_         203 DKAYATIITPDMLEPGMHLNAVGGDCPGKTELHAD  237 (340)
T ss_dssp             CSSEEEEECGGGCCTTCEEEECSCCBTTBEEECHH
T ss_pred             cCCCCcccchhhcCCCCEEeecccchhhhhccCHH
Confidence            4310 111235788888888998864 44566554

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.69  E-value=0.12  Score=40.35  Aligned_cols=31  Identities=26%  Similarity=0.198  Sum_probs=28.2

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      |+|+|+|..|+.++..+...|.+|.++.+.+
T Consensus         8 viViGaG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGTGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            7889999999999999999999999999864

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=90.53  E-value=0.13  Score=38.95  Aligned_cols=32  Identities=22%  Similarity=0.103  Sum_probs=27.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEe
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIS  214 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~  214 (314)
                      .+++|+|+|+|.+|+-++..++.+|.++.++.
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~~   33 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRL   33 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCceEEEE
Confidence            56899999999999999999999998654443

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.52  E-value=0.11  Score=43.53  Aligned_cols=93  Identities=20%  Similarity=0.133  Sum_probs=51.2

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhH--HHHHHHcCC-c-EEecCCCHHHHHHHcCCccEEEEcc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKK--SEAIERLGA-D-SFLVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~--~~~~~~~ga-~-~~v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      +.+|++||-+|+|. |.+++.+++ .|+ +|++++.++...  .+..+..+. + ..+...+...+..-.+.+|+|+...
T Consensus        31 ~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~~~~~~~~~D~ivs~~  108 (316)
T d1oria_          31 LFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEW  108 (316)
T ss_dssp             HHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECC
T ss_pred             cCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHHcccccceeEEEeeee
Confidence            56899999999865 666666666 576 788888765321  222233342 2 2121222111111124689987532


Q ss_pred             C-----Ccc----cHHHHHHhhccCCEEE
Q 021300          256 S-----AVH----PLMPLIGLLKSQGKLV  275 (314)
Q Consensus       256 g-----~~~----~~~~~~~~l~~~G~~v  275 (314)
                      -     .+.    .+...-++|+|+|+++
T Consensus       109 ~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_         109 MGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             CBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            2     111    2334457899999875

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.46  E-value=1.5  Score=31.66  Aligned_cols=91  Identities=16%  Similarity=0.249  Sum_probs=53.3

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHc----C--CcEEecCCCHHHHHHHcCCccEEEEccCC
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERL----G--ADSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~----g--a~~~v~~~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      +|.|+|+|.+|...+..+...+.  +++.++.++++.+.....+    .  ....+...+.    +...+.|+|+-++|.
T Consensus         2 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~----~~~~~adivvitag~   77 (140)
T d1a5za1           2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY----ADLKGSDVVIVAAGV   77 (140)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG----GGGTTCSEEEECCCC
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH----HHhcCCCEEEEeccc
Confidence            57889999999888877776653  7878887765543222221    1  1111222221    224579999999874


Q ss_pred             cc---------------cHH---HHHHhhccCCEEEEEcCC
Q 021300          258 VH---------------PLM---PLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       258 ~~---------------~~~---~~~~~l~~~G~~v~~G~~  280 (314)
                      ..               .+.   ..+.-.+|++.++.+..|
T Consensus        78 ~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvtNP  118 (140)
T d1a5za1          78 PQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNP  118 (140)
T ss_dssp             CCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             ccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeCCc
Confidence            31               122   233344678887776553

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=90.44  E-value=0.13  Score=40.18  Aligned_cols=30  Identities=23%  Similarity=0.284  Sum_probs=27.6

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      |+|+|+|+.|+.++..++.+|.+|.++.+.
T Consensus         5 vvVIG~G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGGGSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCEEEEEecc
Confidence            688999999999999999999999999864

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=90.25  E-value=0.29  Score=36.86  Aligned_cols=83  Identities=13%  Similarity=0.115  Sum_probs=52.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHHH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  264 (314)
                      +|.|+|.|.+|...+..++.. +.+++.+.+..++.      .....+..+.+   .....+.+|+|+.+++.....+.+
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~------~~~~~~~~~~~---~~~~~~~~D~Vvi~tp~~~h~~~a   75 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL------DTKTPVFDVAD---VDKHADDVDVLFLCMGSATDIPEQ   75 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC------SSSSCEEEGGG---GGGTTTTCSEEEECSCTTTHHHHH
T ss_pred             eEEEECChHHHHHHHHHHHhCCCcEEEEEEeccccc------ccccccccchh---hhhhccccceEEEeCCCcccHHHH
Confidence            588999999999888888765 56777665544321      11111122221   122345688888888776667778


Q ss_pred             HHhhccCCEEEEE
Q 021300          265 IGLLKSQGKLVLV  277 (314)
Q Consensus       265 ~~~l~~~G~~v~~  277 (314)
                      .++|..|-.+++.
T Consensus        76 ~~aL~aG~~vv~~   88 (170)
T d1f06a1          76 APKFAQFACTVDT   88 (170)
T ss_dssp             HHHHTTTSEEECC
T ss_pred             HHHHHCCCcEEEe
Confidence            8888877766643

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.21  E-value=0.32  Score=40.47  Aligned_cols=73  Identities=12%  Similarity=0.125  Sum_probs=45.9

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh-----hHHHH---HHHcCC--cEE--ecCCCHHHHHHHc--CCcc
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-----KKSEA---IERLGA--DSF--LVSRDQDEMQAAM--GTMD  249 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~-----~~~~~---~~~~ga--~~~--v~~~~~~~~~~~~--~~~d  249 (314)
                      .++||.|+ |-+|...+..+...|.+|+++++...     +...+   ......  ..+  .|-.+.+.+.+..  .++|
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D   81 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD   81 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence            47899998 99999999999999999999997432     11111   011111  111  2334445444432  3799


Q ss_pred             EEEEccCC
Q 021300          250 GIIDTVSA  257 (314)
Q Consensus       250 ~v~d~~g~  257 (314)
                      +|+.+++.
T Consensus        82 ~Vih~Aa~   89 (339)
T d1n7ha_          82 EVYNLAAQ   89 (339)
T ss_dssp             EEEECCSC
T ss_pred             hhhhcccc
Confidence            99999874

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.17  E-value=0.15  Score=39.97  Aligned_cols=31  Identities=26%  Similarity=0.340  Sum_probs=27.6

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      |+|+|+|+.|+.|+..+..+|.+|++++..+
T Consensus         8 viVIG~GpAGl~aA~~aa~~G~kV~lie~~~   38 (233)
T d1v59a1           8 VVIIGGGPAGYVAAIKAAQLGFNTACVEKRG   38 (233)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCcEEEEEecC
Confidence            6889999999999999999999999998653

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=90.01  E-value=0.33  Score=35.53  Aligned_cols=69  Identities=19%  Similarity=0.171  Sum_probs=41.2

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHcC-C-----cEEecCCCHHHHHHHcCCccEEEEccCC
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLG-A-----DSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~g-a-----~~~v~~~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      +|.|+|+|.+|...+..+...+.  ++++++..+++.+..+..+. +     ...+...+    .+...+.|+|+-+.|.
T Consensus         3 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~----~~~~~~adivvitag~   78 (142)
T d1y6ja1           3 KVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD----YSDVKDCDVIVVTAGA   78 (142)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C----GGGGTTCSEEEECCCC
T ss_pred             eEEEECCCHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc----HHHhCCCceEEEeccc
Confidence            68889999999998888887765  78888877654322222322 1     11111111    1234579999999884


Q ss_pred             c
Q 021300          258 V  258 (314)
Q Consensus       258 ~  258 (314)
                      .
T Consensus        79 ~   79 (142)
T d1y6ja1          79 N   79 (142)
T ss_dssp             -
T ss_pred             c
Confidence            4

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.00  E-value=0.28  Score=37.72  Aligned_cols=94  Identities=16%  Similarity=0.082  Sum_probs=57.4

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCC--c--EEecCCCHHHHHHHcCCccEEE
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGA--D--SFLVSRDQDEMQAAMGTMDGII  252 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~ga--~--~~v~~~~~~~~~~~~~~~d~v~  252 (314)
                      ...++++||=+|+|. |..++.+++ .+.++++++.++.....+.+   ..+.  .  .++..+..+.+  ..+.||+|+
T Consensus        49 ~~~~~~~VLDiGcG~-G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~--~~~~fD~Ii  124 (194)
T d1dusa_          49 VVDKDDDILDLGCGY-GVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV--KDRKYNKII  124 (194)
T ss_dssp             CCCTTCEEEEETCTT-SHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC--TTSCEEEEE
T ss_pred             CcCCCCeEEEEeecC-ChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhh--ccCCceEEE
Confidence            368899999898754 555666665 46799999998876655433   2332  1  22222211111  124699998


Q ss_pred             EccC----Cc---ccHHHHHHhhccCCEEEEE
Q 021300          253 DTVS----AV---HPLMPLIGLLKSQGKLVLV  277 (314)
Q Consensus       253 d~~g----~~---~~~~~~~~~l~~~G~~v~~  277 (314)
                      -...    ..   ..+..+.+.|+++|+++++
T Consensus       125 ~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         125 TNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             ECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence            6432    11   1366678889999998765

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=89.98  E-value=0.17  Score=39.98  Aligned_cols=31  Identities=32%  Similarity=0.296  Sum_probs=28.0

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      |+|+|+|+.|+.|+..+..+|.+|.++...+
T Consensus         9 viIIG~GPaGlsaA~~aa~~G~~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGGGPGGYSAAFAAADEGLKVAIVERYK   39 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCeEEEEeccC
Confidence            6788999999999999999999999998653

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.93  E-value=0.17  Score=39.41  Aligned_cols=30  Identities=40%  Similarity=0.436  Sum_probs=27.3

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      ++|+|+|+.|+.++..+...|.+|.++.+.
T Consensus         6 viVIG~GpaGl~aA~~aar~G~kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGAGPGGYVAAIRAAQLGQKVTIVEKG   35 (223)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCEEEEEecC
Confidence            678899999999999999999999999764

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.78  E-value=0.15  Score=39.17  Aligned_cols=32  Identities=22%  Similarity=0.283  Sum_probs=28.1

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      .+|+|+|+|+.|+.++..+..+|.+++++...
T Consensus         6 ~~VvIIGgGpaGl~aA~~~ar~g~~v~vie~~   37 (192)
T d1vdca1           6 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGW   37 (192)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCCEEECCS
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCCcEEEEEee
Confidence            56899999999999999999999999888743

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=89.59  E-value=0.18  Score=39.98  Aligned_cols=34  Identities=32%  Similarity=0.341  Sum_probs=29.9

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS  218 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~  218 (314)
                      .++||.|+ +++|.+.++.+...|++|+++.++++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~   36 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE   36 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc
Confidence            46788887 99999999999999999999998765

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=89.57  E-value=2.4  Score=34.30  Aligned_cols=58  Identities=22%  Similarity=0.296  Sum_probs=42.1

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC--ChhhHHHHHHHcCCcEEecC
Q 021300          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST--SPSKKSEAIERLGADSFLVS  235 (314)
Q Consensus       178 ~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~--~~~~~~~~~~~~ga~~~v~~  235 (314)
                      .+.++++.+|+...+|..|++++..++.+|.+++++..  .++...+..+.+|++.++..
T Consensus        54 ~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~  113 (292)
T d2bhsa1          54 RGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVT  113 (292)
T ss_dssp             TTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEEC
T ss_pred             hCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceee
Confidence            34456677666667799999999999999997666654  34445567789999865543

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=89.55  E-value=0.18  Score=41.96  Aligned_cols=32  Identities=38%  Similarity=0.367  Sum_probs=28.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      .|+|+|||+.|++++..++..|.++++++..+
T Consensus         9 dV~IIGAG~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVGAGFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECccHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            47889999999999999999999999998764

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=89.55  E-value=3.1  Score=31.91  Aligned_cols=92  Identities=20%  Similarity=0.147  Sum_probs=60.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHH---HHHcCCc-EEecCCCHHHHHH-Hc-CCccEEEEccCCc
Q 021300          186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEA---IERLGAD-SFLVSRDQDEMQA-AM-GTMDGIIDTVSAV  258 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~---~~~~ga~-~~v~~~~~~~~~~-~~-~~~d~v~d~~g~~  258 (314)
                      .||=+|+|. |..++.+|+.. ...++.++.+......+   .++.+.+ ..+...+...+.. .. +.+|.|+-....+
T Consensus        32 lvLeIGcG~-G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~~l~~~~~~~~~d~v~i~fp~P  110 (204)
T d2fcaa1          32 IHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFSDP  110 (204)
T ss_dssp             EEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESCCC
T ss_pred             eEEEEEecC-cHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccchhhhhcccCchhhhccccccccc
Confidence            444478875 78889999987 56899999888776555   3455654 3333444332322 22 3588877654432


Q ss_pred             --------------ccHHHHHHhhccCCEEEEEc
Q 021300          259 --------------HPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       259 --------------~~~~~~~~~l~~~G~~v~~G  278 (314)
                                    ..+..+.+.|+|||.+.+.-
T Consensus       111 ~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~T  144 (204)
T d2fcaa1         111 WPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT  144 (204)
T ss_dssp             CCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred             cchhhhcchhhhHHHHHHHHHHhCCCCcEEEEEE
Confidence                          35778889999999998863

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=89.55  E-value=0.17  Score=40.87  Aligned_cols=30  Identities=13%  Similarity=0.226  Sum_probs=27.5

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      |+|+|+|.+|++++..+...|.+|+++++.
T Consensus         7 vvIIGaGi~Gls~A~~La~~G~~V~vlE~~   36 (276)
T d1ryia1           7 AVVIGGGIIGSAIAYYLAKENKNTALFESG   36 (276)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            889999999999999999899999999875

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=89.50  E-value=0.14  Score=40.06  Aligned_cols=30  Identities=23%  Similarity=0.319  Sum_probs=27.7

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      ++|+|+|+.|+.++..++.+|.+|.++...
T Consensus         8 lvVIG~GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           8 LLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCcEEEEecC
Confidence            788999999999999999999999999864

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=89.49  E-value=0.32  Score=39.12  Aligned_cols=35  Identities=29%  Similarity=0.506  Sum_probs=32.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      -.|.+|+|.|.|.+|..+++++...|++++.+.+.
T Consensus        29 l~g~~v~IqGfGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          29 IEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCeEEEeecc
Confidence            57899999999999999999999999999988764

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=89.45  E-value=0.32  Score=34.43  Aligned_cols=79  Identities=15%  Similarity=0.183  Sum_probs=49.3

Q ss_pred             CCEEEEEcCCh-----------HHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-CcE-EecCCCHHHHHHHc--CCc
Q 021300          184 GMHVGVVGLGG-----------LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADS-FLVSRDQDEMQAAM--GTM  248 (314)
Q Consensus       184 g~~vlI~Gag~-----------vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-a~~-~v~~~~~~~~~~~~--~~~  248 (314)
                      ..+|||+|+|+           .+.-++..+|..|.+++.+..+++... .  .+. +|. ++.+-..+.+..+.  ++.
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVs-t--d~d~aD~lYfeplt~e~v~~Ii~~E~p   80 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVS-T--DYDTSDRLYFEPVTLEDVLEIVRIEKP   80 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSST-T--STTSSSEEECCCCSHHHHHHHHHHHCC
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhh-c--ChhhcCceEEccCCHHHHHHHHHHhCC
Confidence            46899999876           234455556667999999999887651 1  222 344 34444455555543  367


Q ss_pred             cEEEEccCCcccHHHHH
Q 021300          249 DGIIDTVSAVHPLMPLI  265 (314)
Q Consensus       249 d~v~d~~g~~~~~~~~~  265 (314)
                      |.|+-..|+...+..+.
T Consensus        81 ~~ii~~~GGQtalnla~   97 (121)
T d1a9xa4          81 KGVIVQYGGQTPLKLAR   97 (121)
T ss_dssp             SEEECSSSTHHHHTTHH
T ss_pred             CEEEeehhhhhHHHHHH
Confidence            88888888775333333

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=89.39  E-value=0.48  Score=38.68  Aligned_cols=97  Identities=24%  Similarity=0.196  Sum_probs=63.1

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCChhhHHHHHHH---cCCcEEecCCCHHHHHHHcCCccEEEEc
Q 021300          180 LDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIER---LGADSFLVSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~--g~~vi~v~~~~~~~~~~~~~---~ga~~~v~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      .+..+.+||=+|+|. |..+..+++..  +.+++.++.++...+.+.+.   .+.+.-+...+...+ ...+.||+|+-.
T Consensus        24 ~~~~~~~ILDiGcG~-G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~-~~~~~fD~v~~~  101 (281)
T d2gh1a1          24 KITKPVHIVDYGCGY-GYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI-ELNDKYDIAICH  101 (281)
T ss_dssp             CCCSCCEEEEETCTT-THHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTC-CCSSCEEEEEEE
T ss_pred             ccCCcCEEEEecCcC-CHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccccccc-cccCCceEEEEe
Confidence            457778898899874 77888888865  46899999998766555433   333322222222111 123479998865


Q ss_pred             cCC------cccHHHHHHhhccCCEEEEEc
Q 021300          255 VSA------VHPLMPLIGLLKSQGKLVLVG  278 (314)
Q Consensus       255 ~g~------~~~~~~~~~~l~~~G~~v~~G  278 (314)
                      -.-      ...+..+.+.|++||+++..-
T Consensus       102 ~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1         102 AFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             SCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             hhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            321      124778999999999988764

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=89.36  E-value=0.65  Score=36.86  Aligned_cols=94  Identities=14%  Similarity=0.185  Sum_probs=54.9

Q ss_pred             CEEEEEcCCh----HHHHHHHHHHHC--CCeEEEE-eCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCC
Q 021300          185 MHVGVVGLGG----LGHVAVKFAKAM--GVKVTVI-STSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       185 ~~vlI~Gag~----vG~~a~~~a~~~--g~~vi~v-~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      =+|.|+|.|.    ++...+...+..  +++++++ +++.++.+++.++++....-.+.+.+.+. ....+|+|+.++..
T Consensus        17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~iD~V~i~tp~   95 (237)
T d2nvwa1          17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFA-QYKDIDMIVVSVKV   95 (237)
T ss_dssp             EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHH-HCTTCSEEEECSCH
T ss_pred             eEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeecchhhcc-cccccceeeccCCC
Confidence            4688889765    445455555543  4687754 56666777888888864322334433321 12468888888765


Q ss_pred             cccHHHHHHhhccC-----CEEEEEcC
Q 021300          258 VHPLMPLIGLLKSQ-----GKLVLVGA  279 (314)
Q Consensus       258 ~~~~~~~~~~l~~~-----G~~v~~G~  279 (314)
                      ....+.+..+|..|     ++=+++--
T Consensus        96 ~~h~~~~~~al~aG~~~~~~k~V~~EK  122 (237)
T d2nvwa1          96 PEHYEVVKNILEHSSQNLNLRYLYVEW  122 (237)
T ss_dssp             HHHHHHHHHHHHHSSSCSSCCEEEEES
T ss_pred             cchhhHHHHHHHhcccccCCceEEEec
Confidence            54455555555543     34555543

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=89.26  E-value=0.23  Score=39.86  Aligned_cols=32  Identities=22%  Similarity=0.330  Sum_probs=28.1

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      .|||.|+ +++|.+.++.+...|++|+++.+++
T Consensus         3 VvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~   35 (257)
T d1fjha_           3 IIVISGCATGIGAATRKVLEAAGHQIVGIDIRD   35 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence            4678887 9999999999999999999998764

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.18  E-value=2.5  Score=35.41  Aligned_cols=103  Identities=18%  Similarity=0.218  Sum_probs=66.2

Q ss_pred             hcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC--hhhHHHHHHHcCCcEEecCCCH----------------
Q 021300          177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS--PSKKSEAIERLGADSFLVSRDQ----------------  238 (314)
Q Consensus       177 ~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~--~~~~~~~~~~~ga~~~v~~~~~----------------  238 (314)
                      ..+.+++++.|+.-.+|..|.+.+..|+.+|.+.+++...  +....+.++.+|++.+....+.                
T Consensus        90 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~~  169 (355)
T d1jbqa_          90 RDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLK  169 (355)
T ss_dssp             HHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHH
T ss_pred             HcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHHH
Confidence            3444577777776777999999999999999987777653  3334456689999765532110                


Q ss_pred             ----------------H-----------HHHHHcCCccEEEEccCCcccHHHHHHhh---ccCCEEEEEcC
Q 021300          239 ----------------D-----------EMQAAMGTMDGIIDTVSAVHPLMPLIGLL---KSQGKLVLVGA  279 (314)
Q Consensus       239 ----------------~-----------~~~~~~~~~d~v~d~~g~~~~~~~~~~~l---~~~G~~v~~G~  279 (314)
                                      +           ...++...+|.++-++|+..++......+   .+.-+++.+-.
T Consensus       170 ~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep  240 (355)
T d1jbqa_         170 NEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP  240 (355)
T ss_dssp             HHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             HhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeecc
Confidence                            0           01111235899999998765554444444   55677776643

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=89.15  E-value=0.45  Score=40.18  Aligned_cols=73  Identities=15%  Similarity=0.155  Sum_probs=44.3

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh-----hHHHHHHHc---CCcEEe---cCCCHHHHHHHcC--CccE
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-----KKSEAIERL---GADSFL---VSRDQDEMQAAMG--TMDG  250 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~-----~~~~~~~~~---ga~~~v---~~~~~~~~~~~~~--~~d~  250 (314)
                      ..+||.|+ |-+|...+..+...|.+|+++++...     +..++....   .....+   |-.+.+.+.+...  .+|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            46789997 99999999999989999999988542     111111111   111112   2345555555544  6799


Q ss_pred             EEEccCC
Q 021300          251 IIDTVSA  257 (314)
Q Consensus       251 v~d~~g~  257 (314)
                      |+++++.
T Consensus        82 v~h~aa~   88 (357)
T d1db3a_          82 VYNLGAM   88 (357)
T ss_dssp             EEECCCC
T ss_pred             EEEeecc
Confidence            9999864

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.00  E-value=0.18  Score=41.82  Aligned_cols=31  Identities=35%  Similarity=0.416  Sum_probs=27.9

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      |+|+|+|..|+.++..++..|.+|+++...+
T Consensus         2 ViVIGaG~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGGGISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECCBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            7889999999999999999999999998653

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=88.82  E-value=0.56  Score=39.19  Aligned_cols=98  Identities=19%  Similarity=0.079  Sum_probs=60.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCc-EEecCCC-HHHHHHH---cCCccEEEE
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGAD-SFLVSRD-QDEMQAA---MGTMDGIID  253 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~ga~-~~v~~~~-~~~~~~~---~~~~d~v~d  253 (314)
                      .+|++||=+++|. |..++++++ .+.+|+.++.++...+.+.+   ..|.+ .-+...+ .++...+   .+.||+|+-
T Consensus       144 ~~g~rVLDl~~gt-G~~s~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD~Vi~  221 (318)
T d1wxxa2         144 FRGERALDVFSYA-GGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVL  221 (318)
T ss_dssp             CCEEEEEEETCTT-THHHHHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             hCCCeeeccCCCC-cHHHHHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHhhhcCCCEEEE
Confidence            4689998887644 334455554 35699999999887655533   34543 2222333 3444433   347999885


Q ss_pred             ccCC-----c----------ccHHHHHHhhccCCEEEEEcCCC
Q 021300          254 TVSA-----V----------HPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       254 ~~g~-----~----------~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      ....     .          ..+..++++|+|||.++....+.
T Consensus       222 DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs~  264 (318)
T d1wxxa2         222 DPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH  264 (318)
T ss_dssp             CCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred             cCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence            3321     1          12456788899999999987653

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.73  E-value=0.23  Score=38.61  Aligned_cols=30  Identities=23%  Similarity=0.381  Sum_probs=27.3

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      ++|+|+|+.|+.++..+..+|.+|.++...
T Consensus         6 viIIG~GpaG~~aA~~aar~G~kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGGGSGGLASARRAAELGARAAVVESH   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCEEEEEecc
Confidence            678899999999999999999999999764

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=88.70  E-value=1.1  Score=34.48  Aligned_cols=74  Identities=24%  Similarity=0.260  Sum_probs=46.2

Q ss_pred             hHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEE
Q 021300          175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       175 l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d  253 (314)
                      +...+. -.|++||=+|+|. |..++.+++ +|+ +|+.++.+++..+.+.+......++..+    +.++.+.||+||-
T Consensus        41 ~~~~~d-l~Gk~VLDlGcGt-G~l~i~a~~-~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D----~~~l~~~fD~Vi~  113 (197)
T d1ne2a_          41 IYNDGN-IGGRSVIDAGTGN-GILACGSYL-LGAESVTAFDIDPDAIETAKRNCGGVNFMVAD----VSEISGKYDTWIM  113 (197)
T ss_dssp             HHHHTS-SBTSEEEEETCTT-CHHHHHHHH-TTBSEEEEEESCHHHHHHHHHHCTTSEEEECC----GGGCCCCEEEEEE
T ss_pred             HHHcCC-CCCCEEEEeCCCC-cHHHHHHHH-cCCCcccccccCHHHHHHHHHccccccEEEEe----hhhcCCcceEEEe
Confidence            334454 4689999998754 555554444 565 7999999988776555444433433322    2234568999987


Q ss_pred             cc
Q 021300          254 TV  255 (314)
Q Consensus       254 ~~  255 (314)
                      +.
T Consensus       114 NP  115 (197)
T d1ne2a_         114 NP  115 (197)
T ss_dssp             CC
T ss_pred             Cc
Confidence            64

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=88.70  E-value=0.59  Score=39.07  Aligned_cols=101  Identities=13%  Similarity=0.174  Sum_probs=68.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHH-CCC-eEEEEeCChhhHHHHHHHc---CCcEEecCCCHHHHHHHcCCccEEEEccC
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERL---GADSFLVSRDQDEMQAAMGTMDGIIDTVS  256 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~-~g~-~vi~v~~~~~~~~~~~~~~---ga~~~v~~~~~~~~~~~~~~~d~v~d~~g  256 (314)
                      +...++.|+|+|..+...++.+.. +.. ++.++.+++++.+.+++++   +.....+  ..    +...+.|+|+-++.
T Consensus       123 ~~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~--~~----~a~~~aDiV~taT~  196 (320)
T d1omoa_         123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQ--PA----EEASRCDVLVTTTP  196 (320)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEEC--CH----HHHTSSSEEEECCC
T ss_pred             CCccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccc--hh----hhhccccEEEEecc
Confidence            455788999999999887777664 454 8889999988876665544   3343322  11    23457999998887


Q ss_pred             CcccHHHHHHhhccCCEEEEEcCCC-CCcccchh
Q 021300          257 AVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAF  289 (314)
Q Consensus       257 ~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~  289 (314)
                      +...+ --.+.+++|-.+..+|... +..+++..
T Consensus       197 s~~P~-~~~~~l~~G~hv~~iGs~~p~~~Eld~~  229 (320)
T d1omoa_         197 SRKPV-VKAEWVEEGTHINAIGADGPGKQELDVE  229 (320)
T ss_dssp             CSSCC-BCGGGCCTTCEEEECSCCSTTCCCBCHH
T ss_pred             Ccccc-cchhhcCCCCeEeecCCccccccccCHH
Confidence            54321 1234688999999999864 34566554

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.64  E-value=0.22  Score=38.67  Aligned_cols=67  Identities=12%  Similarity=-0.003  Sum_probs=42.0

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHcCCcEEecCCCHH-HHHHHcCCccEEEEccCCc
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGADSFLVSRDQD-EMQAAMGTMDGIIDTVSAV  258 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~-~~~~~~~~~d~v~d~~g~~  258 (314)
                      .+|||.|+ |.+|...+..+...|.  +|++..+.+...       ....-.+..+.+ ....+....|.|+.++|..
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-------~~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~~   73 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-------HPRLDNPVGPLAELLPQLDGSIDTAFCCLGTT   73 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-------CTTEECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-------cccccccccchhhhhhccccchheeeeeeeee
Confidence            68999998 9999999998888886  565555543210       011111223322 2233345789999998753

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=88.55  E-value=0.21  Score=41.13  Aligned_cols=30  Identities=43%  Similarity=0.515  Sum_probs=27.5

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      |+|+|+|..|+.++..+...|++|+++...
T Consensus        19 VlVIG~G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          19 VVVVGSGGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCcEEEEecC
Confidence            788999999999999999999999999864

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.46  E-value=1.4  Score=34.92  Aligned_cols=42  Identities=31%  Similarity=0.558  Sum_probs=32.6

Q ss_pred             hHhcCCCCCCCEEEEEcCChHHHHHHHHH-HHCCCeEEEEeCC
Q 021300          175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFA-KAMGVKVTVISTS  216 (314)
Q Consensus       175 l~~~~~~~~g~~vlI~Gag~vG~~a~~~a-~~~g~~vi~v~~~  216 (314)
                      +...+.--.|.+|+|.|.|.+|..+++++ +..|++++.+.+.
T Consensus        22 ~~~~~~~l~g~~vaIqG~GnVG~~~a~~L~~e~Ga~vv~vsd~   64 (234)
T d1b26a1          22 MDVLGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDS   64 (234)
T ss_dssp             HHHTTCCTTTCEEEEECCSHHHHHHHHHHHHHHCCEEEEEEET
T ss_pred             HHHcCCCcCCCEEEEECCCHHHHHHHHHHHHhcCCceEEeecC
Confidence            44444335789999999999999999887 5689999887753

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=88.19  E-value=0.22  Score=38.74  Aligned_cols=30  Identities=33%  Similarity=0.401  Sum_probs=27.0

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      |+|+|+|+.|+.|+..+...|.+|.++...
T Consensus         6 viIIGgGpAGl~aA~~aar~G~~V~viE~~   35 (229)
T d3lada1           6 VIVIGAGPGGYVAAIKSAQLGLKTALIEKY   35 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             EEEECcCHHHHHHHHHHHHCCCeEEEEecc
Confidence            678899999999999999999999999853

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=88.17  E-value=0.35  Score=39.63  Aligned_cols=36  Identities=25%  Similarity=0.372  Sum_probs=31.4

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCChh
Q 021300          183 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPS  218 (314)
Q Consensus       183 ~g~~vlI~Ga-g--~vG~~a~~~a~~~g~~vi~v~~~~~  218 (314)
                      .|.++||.|+ |  ++|.+.++.+...|++|++..+++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~   45 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPA   45 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchh
Confidence            6789999997 4  7999999999999999998887654

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=88.16  E-value=0.24  Score=40.15  Aligned_cols=30  Identities=33%  Similarity=0.366  Sum_probs=27.4

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      |+|+|+|.+|++++..+...|.+|+++++.
T Consensus         6 vvIIGaGi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGAGSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            788999999999999999999999999864

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=88.16  E-value=0.18  Score=41.76  Aligned_cols=32  Identities=31%  Similarity=0.332  Sum_probs=28.6

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      .++|+|||..|+.++..+...|.+|.++..++
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence            37899999999999999988899999998764

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=88.01  E-value=0.2  Score=41.87  Aligned_cols=31  Identities=29%  Similarity=0.416  Sum_probs=25.9

Q ss_pred             EEEEcCChHHHHHHHHHH-----HCCCeEEEEeCCh
Q 021300          187 VGVVGLGGLGHVAVKFAK-----AMGVKVTVISTSP  217 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~-----~~g~~vi~v~~~~  217 (314)
                      |+|+|+|++|++++..+.     ..|.+|+++.+.+
T Consensus        10 V~IvGaG~aGl~lA~~La~~~~~~~G~~v~vlEr~~   45 (360)
T d1pn0a1          10 VLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS   45 (360)
T ss_dssp             EEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHhcccccCCCcEEEEcCCC
Confidence            789999999988887774     4689999998764

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=88.01  E-value=2  Score=33.74  Aligned_cols=97  Identities=18%  Similarity=0.148  Sum_probs=63.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCChhhHHHH---HHHcCCc---EEecCCCHHHHHHH------cCC
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEA---IERLGAD---SFLVSRDQDEMQAA------MGT  247 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~--g~~vi~v~~~~~~~~~~---~~~~ga~---~~v~~~~~~~~~~~------~~~  247 (314)
                      ....+||=+|.+ +|+.++.+|+.+  +.+++.++.+++....+   .++.|..   .++.....+.+.++      .+.
T Consensus        58 ~~~k~iLEiGT~-~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~~L~~l~~~~~~~~~  136 (227)
T d1susa1          58 INAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS  136 (227)
T ss_dssp             HTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCGGGTTC
T ss_pred             cCCCcEEEecch-hhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHHHHHHHHHhccccCCc
Confidence            455788888874 488889999876  46999888887654333   2344542   22222333555554      236


Q ss_pred             ccEEEEccCCcc---cHHHHHHhhccCCEEEEEcC
Q 021300          248 MDGIIDTVSAVH---PLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       248 ~d~v~d~~g~~~---~~~~~~~~l~~~G~~v~~G~  279 (314)
                      ||+||--.....   -+..+++.|++||.++.=-.
T Consensus       137 fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DNv  171 (227)
T d1susa1         137 YDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNT  171 (227)
T ss_dssp             BSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEETT
T ss_pred             eeEEEeccchhhhHHHHHHHHhhcCCCcEEEEccC
Confidence            999886554332   37788999999999887644

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.82  E-value=0.21  Score=39.40  Aligned_cols=29  Identities=31%  Similarity=0.312  Sum_probs=26.8

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCeEEEEeC
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGVKVTVIST  215 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~~vi~v~~  215 (314)
                      |+|+|+|+.|+.|+..+..+|.+|.++..
T Consensus         6 viVIG~GpaGl~aA~~aa~~G~kV~viE~   34 (235)
T d1h6va1           6 LIIIGGGSGGLAAAKEAAKFDKKVMVLDF   34 (235)
T ss_dssp             EEEECCSHHHHHHHHHHGGGCCCEEEECC
T ss_pred             EEEECCCHHHHHHHHHHHHCCCeEEEEec
Confidence            78899999999999999999999999984

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=87.61  E-value=0.49  Score=34.74  Aligned_cols=47  Identities=19%  Similarity=0.150  Sum_probs=38.2

Q ss_pred             hhhhhhhHhcCCCCCCCEEEEE--cCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          169 ITVYSPLRFYGLDKPGMHVGVV--GLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlI~--Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      .|....+.  ...+++..++|+  |+|.+|+.+++.+..+|.+|.++.+.+
T Consensus        26 ~t~~d~l~--~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          26 LTPEQVMD--GKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             ECHHHHHH--TCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             ECHHHHhc--CccccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            35555554  335788888887  779999999999999999999999875

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=87.57  E-value=0.24  Score=37.95  Aligned_cols=92  Identities=14%  Similarity=0.147  Sum_probs=55.3

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcC---CcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLG---ADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~g---a~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      +|.|+|+ |-+|+-.++++..+. .++..+......-..+.+.+.   .......  .........+.|++|-+.++.. 
T Consensus         7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dvvf~alp~~~-   83 (183)
T d2cvoa1           7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNL--VAVKDADFSNVDAVFCCLPHGT-   83 (183)
T ss_dssp             EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCC--BCGGGCCGGGCSEEEECCSSSH-
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccccc--hhhhhhhhcccceeeeccccch-
Confidence            4688998 999999999999875 466655544322222211111   1100000  0111112246999999999886 


Q ss_pred             HHHHHHhhccCCEEEEEcCC
Q 021300          261 LMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       261 ~~~~~~~l~~~G~~v~~G~~  280 (314)
                      .......+...++++.....
T Consensus        84 s~~~~~~l~~~~~~v~~~~~  103 (183)
T d2cvoa1          84 TQEIIKGLPQELKIVDLSAD  103 (183)
T ss_dssp             HHHHHHTSCSSCEEEECSST
T ss_pred             HHHHHHHHHhcCcccccchh
Confidence            56666778888888877654

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=87.32  E-value=1.7  Score=30.55  Aligned_cols=91  Identities=13%  Similarity=0.168  Sum_probs=59.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHH-cCCccEEEEccCCccc---
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVHP---  260 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v-~~~~~~~~~~~-~~~~d~v~d~~g~~~~---  260 (314)
                      .++|.|.|.+|...++.++  +..+++++.++++.+.+ +..|...+. |..+++.+++. .+.++.++-++.+...   
T Consensus         2 HivI~G~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~-~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~~d~~n~~   78 (129)
T d2fy8a1           2 HVVICGWSESTLECLRELR--GSEVFVLAEDENVRKKV-LRSGANFVHGDPTRVSDLEKANVRGARAVIVNLESDSETIH   78 (129)
T ss_dssp             CEEEESCCHHHHHHHHTSC--GGGEEEEESCTTHHHHH-HHTTCEEEESCTTSHHHHHHTTCTTCSEEEECCSSHHHHHH
T ss_pred             EEEEECCCHHHHHHHHHHc--CCCCEEEEcchHHHHHH-HhcCccccccccCCHHHHHHhhhhcCcEEEEeccchhhhHH
Confidence            4788899999998888765  45678888888877666 566765543 44455655554 3479999988876532   


Q ss_pred             HHHHHHhhccCCEEEEEcC
Q 021300          261 LMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       261 ~~~~~~~l~~~G~~v~~G~  279 (314)
                      +....+.+.+..+++....
T Consensus        79 ~~~~~r~~~~~~~iia~~~   97 (129)
T d2fy8a1          79 CILGIRKIDESVRIIAEAE   97 (129)
T ss_dssp             HHHHHHHHCSSSCEEEECS
T ss_pred             HHHHHHHHCCCceEEEEEc
Confidence            2233445556666665544

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.28  E-value=0.28  Score=38.53  Aligned_cols=32  Identities=19%  Similarity=0.246  Sum_probs=26.6

Q ss_pred             EEEEEcCChHHHHHHHHHHH--CCCeEEEEeCCh
Q 021300          186 HVGVVGLGGLGHVAVKFAKA--MGVKVTVISTSP  217 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~--~g~~vi~v~~~~  217 (314)
                      +|+|+|+|+.|+.|+..++.  .|.+|++++..+
T Consensus         3 kv~iIGaGpaGl~aA~~L~~~~~~~~V~v~e~~~   36 (230)
T d1cjca2           3 QICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQL   36 (230)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred             eEEEECccHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            79999999999999986654  477999988765

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=87.19  E-value=0.19  Score=39.51  Aligned_cols=33  Identities=18%  Similarity=0.255  Sum_probs=27.5

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCC-------CeEEEEeCCh
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMG-------VKVTVISTSP  217 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g-------~~vi~v~~~~  217 (314)
                      -+|+|+|+|+.|++|+..+...|       .+|.++...+
T Consensus         3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             cEEEEECcCHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            37999999999999998887766       5788888765

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=86.89  E-value=0.32  Score=40.70  Aligned_cols=33  Identities=24%  Similarity=0.286  Sum_probs=26.8

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCh
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSP  217 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~  217 (314)
                      .+|+|+|||+.|++++..++..|  .+|++..+.+
T Consensus         5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            47999999999998887666555  4898988875

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=86.74  E-value=0.5  Score=32.96  Aligned_cols=36  Identities=17%  Similarity=0.070  Sum_probs=28.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHC---CCeEEEEeCCh
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAM---GVKVTVISTSP  217 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~---g~~vi~v~~~~  217 (314)
                      +.+++++|+|+|.+|.-.+.++..+   |.+|.++.+.+
T Consensus        16 ~~p~~v~IiGgG~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          16 EAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             SCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             ccCCeEEEECCChHHHHHHHHhHhhcccccccceecccc
Confidence            4458999999999998888765543   77898888764

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=86.54  E-value=2.3  Score=31.60  Aligned_cols=93  Identities=14%  Similarity=0.092  Sum_probs=52.0

Q ss_pred             CCCCCEEEEEcC--ChHHHHHHHHHHHCCCeEEEEeCChhhHHHH---HHHcCC-cEEecCCCHHHHHH---HcCCccEE
Q 021300          181 DKPGMHVGVVGL--GGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGA-DSFLVSRDQDEMQA---AMGTMDGI  251 (314)
Q Consensus       181 ~~~g~~vlI~Ga--g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~---~~~~ga-~~~v~~~~~~~~~~---~~~~~d~v  251 (314)
                      +..|.+||=+++  |.+|.   . |...|++++.++.++...+.+   .+.++. +.+...+.......   ..+.||+|
T Consensus        39 ~~~g~~vLDl~~G~G~~~i---~-a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~I  114 (171)
T d1ws6a1          39 YPRRGRFLDPFAGSGAVGL---E-AASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVA  114 (171)
T ss_dssp             CTTCCEEEEETCSSCHHHH---H-HHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEE
T ss_pred             ccCCCeEEEeccccchhhh---h-hhhccchhhhcccCHHHHhhhhHHHHhhccccceeeeehhcccccccccCCcccee
Confidence            577888887754  55543   3 334689999888887765433   244564 34443332222222   22479999


Q ss_pred             EEcc----CCcccHHHHH--HhhccCCEEEEE
Q 021300          252 IDTV----SAVHPLMPLI--GLLKSQGKLVLV  277 (314)
Q Consensus       252 ~d~~----g~~~~~~~~~--~~l~~~G~~v~~  277 (314)
                      |-..    +....+..++  +.++++|.++.-
T Consensus       115 f~DPPY~~~~~~~l~~l~~~~ll~~~g~ivie  146 (171)
T d1ws6a1         115 FMAPPYAMDLAALFGELLASGLVEAGGLYVLQ  146 (171)
T ss_dssp             EECCCTTSCTTHHHHHHHHHTCEEEEEEEEEE
T ss_pred             EEccccccCHHHHHHHHHHcCCcCCCeEEEEE
Confidence            8532    2222233333  357888877654

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=86.34  E-value=0.28  Score=40.80  Aligned_cols=31  Identities=35%  Similarity=0.441  Sum_probs=27.6

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      -|+|+|+|..|+.++..+...|++|+++...
T Consensus        21 DVvVIGaG~aGl~AA~~aa~~G~~V~vlEK~   51 (317)
T d1qo8a2          21 QVLVVGAGSAGFNASLAAKKAGANVILVDKA   51 (317)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            3788999999999999999999999999864

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=86.28  E-value=0.36  Score=38.98  Aligned_cols=95  Identities=20%  Similarity=0.190  Sum_probs=57.6

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHH---HHHcCC-cEE-ecCCCHHHHHHHcCCccEEEEc
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEA---IERLGA-DSF-LVSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~---~~~~ga-~~~-v~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      +....+||=+|+|. |..+..+++.. +.++++++. ++..+.+   .++.|. +.+ +...+  .......++|+++-.
T Consensus        79 ~~~~~~vlDvG~G~-G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~d--~~~~~p~~~D~v~~~  154 (256)
T d1qzza2          79 WSAVRHVLDVGGGN-GGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGD--FFKPLPVTADVVLLS  154 (256)
T ss_dssp             CTTCCEEEEETCTT-SHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECC--TTSCCSCCEEEEEEE
T ss_pred             CccCCEEEEECCCC-CHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeeee--ccccccccchhhhcc
Confidence            56667888788764 78899999987 568888875 4433222   233342 221 12222  111233468887743


Q ss_pred             c-----CCc---ccHHHHHHhhccCCEEEEEcC
Q 021300          255 V-----SAV---HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       255 ~-----g~~---~~~~~~~~~l~~~G~~v~~G~  279 (314)
                      -     ...   ..+..+.+.|+|+|+++.+..
T Consensus       155 ~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~  187 (256)
T d1qzza2         155 FVLLNWSDEDALTILRGCVRALEPGGRLLVLDR  187 (256)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             ccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence            2     111   236778889999999998864

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=86.24  E-value=0.33  Score=36.89  Aligned_cols=92  Identities=13%  Similarity=0.114  Sum_probs=54.8

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeC-Ch-----hhHHHHHHHc-CC--cEEecCCCHHHHHHHcCCccEEEEc
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAM-GVKVTVIST-SP-----SKKSEAIERL-GA--DSFLVSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~-g~~vi~v~~-~~-----~~~~~~~~~~-ga--~~~v~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      +|.|+|+ |-+|+-.++++..+ ..++..+.. +.     ++.......+ +.  .......+   ........|++|-+
T Consensus         3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dvvf~a   79 (179)
T d2g17a1           3 NTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSD---VRDFSADVDVVFLA   79 (179)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESC---GGGTCTTCCEEEEC
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchh---hhhhhcccceeecc
Confidence            5889998 99999999999998 456654432 11     1121211111 11  11111111   11223578999999


Q ss_pred             cCCcccHHHHHHhhccCCEEEEEcCC
Q 021300          255 VSAVHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       255 ~g~~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      .++..........+..+-+++..+..
T Consensus        80 lp~~~s~~~~~~~~~~~~~vIDlSad  105 (179)
T d2g17a1          80 TAHEVSHDLAPQFLQAGCVVFDLSGA  105 (179)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEECSST
T ss_pred             ccchhHHHHhhhhhhcCceeeccccc
Confidence            99876455566666777788888764

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.19  E-value=0.61  Score=34.43  Aligned_cols=35  Identities=20%  Similarity=0.134  Sum_probs=28.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCC
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTS  216 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~  216 (314)
                      .-+++|+|+|+|-+|.=++..+..+|++ |+++.+.
T Consensus        43 ~~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          43 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             cCCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeC
Confidence            4567899999999999999998889985 6666654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.02  E-value=0.45  Score=39.15  Aligned_cols=71  Identities=18%  Similarity=0.139  Sum_probs=45.6

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhh--HHHHHHHcCCc-----EEecCCCHHHHHHHcC--CccEEEEc
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK--KSEAIERLGAD-----SFLVSRDQDEMQAAMG--TMDGIIDT  254 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~--~~~~~~~~ga~-----~~v~~~~~~~~~~~~~--~~d~v~d~  254 (314)
                      .+|||.|+ |.+|...+..+...|.+|+++++....  ..++ +.++.+     .-.|-.+.+.+.+...  ..++++.+
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~   79 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRL-RELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNL   79 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHH-HHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHH-HHhcccCCcEEEEccccChHHhhhhhccccccccccc
Confidence            47999998 999999999888889999999875432  1222 334432     1224445554444332  46677766


Q ss_pred             cC
Q 021300          255 VS  256 (314)
Q Consensus       255 ~g  256 (314)
                      ..
T Consensus        80 a~   81 (321)
T d1rpna_          80 AA   81 (321)
T ss_dssp             CS
T ss_pred             cc
Confidence            55

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=85.92  E-value=0.32  Score=40.44  Aligned_cols=31  Identities=29%  Similarity=0.290  Sum_probs=27.8

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      |+|+|+|+.|+.|+..|+..|++|+++...+
T Consensus         8 VvVIG~G~AGl~AAl~aa~~G~~V~liEK~~   38 (336)
T d2bs2a2           8 SLVIGGGLAGLRAAVATQQKGLSTIVLSLIP   38 (336)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred             EEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence            7889999999999999999999999997653

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=85.86  E-value=0.42  Score=38.38  Aligned_cols=30  Identities=30%  Similarity=0.348  Sum_probs=27.5

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      ++|+|+|+.|+.++..+..+|.+|.++.+.
T Consensus         4 viVIG~G~aG~~aA~~aa~~G~~V~liE~~   33 (259)
T d1onfa1           4 LIVIGGGSGGMAAARRAARHNAKVALVEKS   33 (259)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCeEEEEecC
Confidence            678999999999999999999999999864

>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GidA-like
domain: GidA-related protein TTHA1897
species: Thermus thermophilus [TaxId: 274]

Probab=85.81  E-value=0.56  Score=37.27  Aligned_cols=31  Identities=29%  Similarity=0.355  Sum_probs=28.0

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      |+|+|+|+.|+.|+..+..+|+++.+++.+.
T Consensus         5 VIVIGgG~AG~eAA~~aAR~G~ktllit~~~   35 (230)
T d2cula1           5 VLIVGAGFSGAETAFWLAQKGVRVGLLTQSL   35 (230)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred             EEEECcCHHHHHHHHHHHHCCCcEEEEEecc
Confidence            6788999999999999999999999998764

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.69  E-value=1.5  Score=34.22  Aligned_cols=98  Identities=14%  Similarity=0.115  Sum_probs=62.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCChhhHHHHH---HHcCC-cE--EecCCCHHHHHHH-----cCCc
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAI---ERLGA-DS--FLVSRDQDEMQAA-----MGTM  248 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~--g~~vi~v~~~~~~~~~~~---~~~ga-~~--~v~~~~~~~~~~~-----~~~~  248 (314)
                      ...++||=+|.+ .|+.++.+|+.+  +.+++.++.+++..+.+.   ++.|. +.  +..-...+.+.+.     .+.|
T Consensus        58 ~~~k~vLEiGt~-~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda~e~l~~~~~~~~~~~f  136 (219)
T d2avda1          58 IQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF  136 (219)
T ss_dssp             TTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred             cCCCeEEEEech-hhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeehhhcchhhhhhcccCCc
Confidence            556788888875 377888888876  469999988877543332   33453 21  1222223444333     2369


Q ss_pred             cEEEEccCCcc---cHHHHHHhhccCCEEEEEcCC
Q 021300          249 DGIIDTVSAVH---PLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       249 d~v~d~~g~~~---~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      |+||--.....   .+..+++.|++||.++.=-..
T Consensus       137 D~ifiD~dk~~y~~~~~~~~~lL~~GGvii~Dn~l  171 (219)
T d2avda1         137 DVAVVDADKENCSAYYERCLQLLRPGGILAVLRVL  171 (219)
T ss_dssp             EEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred             cEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEeCCc
Confidence            99887654432   266889999999999886543

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=85.55  E-value=0.36  Score=40.10  Aligned_cols=30  Identities=33%  Similarity=0.529  Sum_probs=27.4

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      |+|+|+|..|+.++..+...|++|+++...
T Consensus        26 VvVIG~G~aGl~aA~~la~~G~~V~llEk~   55 (322)
T d1d4ca2          26 VVIIGSGGAGLAAAVSARDAGAKVILLEKE   55 (322)
T ss_dssp             EEEECSSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            888999999999999999899999999864

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=85.43  E-value=1  Score=33.04  Aligned_cols=71  Identities=15%  Similarity=0.140  Sum_probs=44.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHc-------CCc-EEecCCCHHHHHHHcCCccEEEE
Q 021300          183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERL-------GAD-SFLVSRDQDEMQAAMGTMDGIID  253 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~-------ga~-~~v~~~~~~~~~~~~~~~d~v~d  253 (314)
                      |..+|.|+|+|.+|...+.++...+. ++++++..+++.+..+..+       +.. .+.-..+.    +...+.|+|+-
T Consensus         2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~----~~~~~advvvi   77 (150)
T d1t2da1           2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY----DDLAGADVVIV   77 (150)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG----GGGTTCSEEEE
T ss_pred             CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccc----cccCCCcEEEE
Confidence            45689999999999888888877775 7777777665433332222       121 11111111    23457999999


Q ss_pred             ccCC
Q 021300          254 TVSA  257 (314)
Q Consensus       254 ~~g~  257 (314)
                      +.|.
T Consensus        78 tag~   81 (150)
T d1t2da1          78 TAGF   81 (150)
T ss_dssp             CCSC
T ss_pred             eccc
Confidence            9884

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=85.29  E-value=1.8  Score=35.88  Aligned_cols=108  Identities=17%  Similarity=0.174  Sum_probs=67.1

Q ss_pred             hhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC--hhhHHHHHHHcCCcEEecCCCHH---------
Q 021300          171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS--PSKKSEAIERLGADSFLVSRDQD---------  239 (314)
Q Consensus       171 a~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~--~~~~~~~~~~~ga~~~v~~~~~~---------  239 (314)
                      |++.+.....-.+..+|+...+|..|.+++..++.+|.+++++...  +.......+.+|++.++...+.+         
T Consensus        62 a~~~i~~~~~~~~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~~  141 (331)
T d1tdja1          62 AYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIEL  141 (331)
T ss_dssp             HHHHHHTTTTSSCSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhhh
Confidence            3444444332244555666667888999999999999977766643  33445667888998765544321         


Q ss_pred             --------------------------HHHHHcCCccEEEEccCCcccHHHHHH---hhccCCEEEEEc
Q 021300          240 --------------------------EMQAAMGTMDGIIDTVSAVHPLMPLIG---LLKSQGKLVLVG  278 (314)
Q Consensus       240 --------------------------~~~~~~~~~d~v~d~~g~~~~~~~~~~---~l~~~G~~v~~G  278 (314)
                                                .+.+....+|.+|-++|+..++.-+..   .+.+.-+++-+-
T Consensus       142 ~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve  209 (331)
T d1tdja1         142 SQQQGFTWVPPFDHPMVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVE  209 (331)
T ss_dssp             HHHHCCEECCSSCCHHHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             hhcCCCccccccCChHHhhhhhhHHHHHHHhcCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEec
Confidence                                      011112358999999987654444444   445666777663

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=85.24  E-value=0.4  Score=38.95  Aligned_cols=32  Identities=38%  Similarity=0.370  Sum_probs=26.4

Q ss_pred             EEEEEcCChHHHHHHHHH-HHCCCeEEEEeCCh
Q 021300          186 HVGVVGLGGLGHVAVKFA-KAMGVKVTVISTSP  217 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a-~~~g~~vi~v~~~~  217 (314)
                      -|+|+|+|+.|+.++..+ +..|.+|.++++.+
T Consensus        35 DViVIGaGpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          35 DVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             CEEEECCCHHHHHHHHHHHHccCCeEEEEecCC
Confidence            388999999999887654 55699999999764

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=85.16  E-value=0.39  Score=39.26  Aligned_cols=31  Identities=19%  Similarity=0.313  Sum_probs=26.2

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS  216 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~  216 (314)
                      .|+|+|+|.+|++++..+...|. +|+++++.
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            58999999999988888877886 68888765

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=84.58  E-value=1.2  Score=32.59  Aligned_cols=90  Identities=16%  Similarity=0.180  Sum_probs=48.8

Q ss_pred             EEEEEcC-ChHHHHHHHHH-HHCC---CeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          186 HVGVVGL-GGLGHVAVKFA-KAMG---VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a-~~~g---~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      +|.|+|| |-+|+-.++++ .+..   .+++...++....................+.+.    ..++|++|-++++.. 
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~~~----~~~~DivF~a~~~~~-   77 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEA----LKALDIIVTCQGGDY-   77 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHH----HHTCSEEEECSCHHH-
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccchhh----hhcCcEEEEecCchH-
Confidence            6889998 99999999754 4332   356555554322111100001111112222221    246999999999875 


Q ss_pred             HHHHHHhhccCC---EEEEEcCC
Q 021300          261 LMPLIGLLKSQG---KLVLVGAP  280 (314)
Q Consensus       261 ~~~~~~~l~~~G---~~v~~G~~  280 (314)
                      .......+...|   .+++.++.
T Consensus        78 s~~~~~~~~~~g~~~~VID~Ss~  100 (146)
T d1t4ba1          78 TNEIYPKLRESGWQGYWIDAASS  100 (146)
T ss_dssp             HHHHHHHHHHTTCCCEEEECSST
T ss_pred             HHHhhHHHHhcCCCeecccCCcc
Confidence            444444444433   47777664

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=84.37  E-value=0.37  Score=38.92  Aligned_cols=60  Identities=10%  Similarity=0.178  Sum_probs=38.7

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcC--CccEEEEccCC
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG--TMDGIIDTVSA  257 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~--~~d~v~d~~g~  257 (314)
                      +|||.|+ |.+|...+..+...| +++.+.+....       +-    .|-.+.+.+.+...  ++|+||++++.
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g-~~v~~~~~~~~-------~~----~Dl~~~~~~~~~i~~~~~D~Vih~Aa~   64 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVG-NLIALDVHSKE-------FC----GDFSNPKGVAETVRKLRPDVIVNAAAH   64 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTS-EEEEECTTCSS-------SC----CCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCC-CEEEEECCCcc-------cc----CcCCCHHHHHHHHHHcCCCEEEEeccc
Confidence            6999998 999999888777666 45554444321       11    23345555554433  68999998873

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=84.24  E-value=0.7  Score=32.21  Aligned_cols=36  Identities=22%  Similarity=0.107  Sum_probs=28.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCC---CeEEEEeCCh
Q 021300          182 KPGMHVGVVGLGGLGHVAVKFAKAMG---VKVTVISTSP  217 (314)
Q Consensus       182 ~~g~~vlI~Gag~vG~~a~~~a~~~g---~~vi~v~~~~  217 (314)
                      +.+++++|+|+|.+|.-++..+..++   .+|.++.+.+
T Consensus        18 ~~p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          18 EPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             SCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             hcCCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            45689999999999998887776654   4688887754

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=84.10  E-value=1.1  Score=32.72  Aligned_cols=70  Identities=16%  Similarity=0.151  Sum_probs=45.7

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHHc-------CCcEEecCCCHHHHHHHcCCccEEEEc
Q 021300          184 GMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERL-------GADSFLVSRDQDEMQAAMGTMDGIIDT  254 (314)
Q Consensus       184 g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~~~-------ga~~~v~~~~~~~~~~~~~~~d~v~d~  254 (314)
                      ..+|.|+|+|.+|...+..+...+  .++++++..+++.+..+..+       +...+ ...+.+    ...+.|+|+-+
T Consensus         5 ~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~-~~~d~~----~~~~adivvit   79 (146)
T d1ez4a1           5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKI-YSGEYS----DCKDADLVVIT   79 (146)
T ss_dssp             BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEE-EECCGG----GGTTCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceE-eeccHH----HhccccEEEEe
Confidence            458999999999998888888766  37888888876543332222       12222 222322    23579999999


Q ss_pred             cCCc
Q 021300          255 VSAV  258 (314)
Q Consensus       255 ~g~~  258 (314)
                      +|..
T Consensus        80 ag~~   83 (146)
T d1ez4a1          80 AGAP   83 (146)
T ss_dssp             CCC-
T ss_pred             cccc
Confidence            8854

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=83.93  E-value=2.9  Score=34.53  Aligned_cols=97  Identities=15%  Similarity=0.096  Sum_probs=58.5

Q ss_pred             CCCCCCEEEEEcC--ChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHc---CC---cE-EecCCCHHHHHHHc---C
Q 021300          180 LDKPGMHVGVVGL--GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERL---GA---DS-FLVSRDQDEMQAAM---G  246 (314)
Q Consensus       180 ~~~~g~~vlI~Ga--g~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~---ga---~~-~v~~~~~~~~~~~~---~  246 (314)
                      .+.+|++||=+.+  |+.+   +..+ ..|+ +|+.++.++.....+.+.+   |.   .. ++..+..++++...   +
T Consensus       141 ~~~~g~~VLdlf~~~G~~s---l~aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~~l~~~~~~~~  216 (317)
T d2b78a2         141 GSAAGKTVLNLFSYTAAFS---VAAA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHL  216 (317)
T ss_dssp             TTTBTCEEEEETCTTTHHH---HHHH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTC
T ss_pred             HhhCCCceeecCCCCcHHH---HHHH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHHHHHHHHhhcC
Confidence            3678999998754  5443   3333 3566 7888888877654443332   22   22 33333345555432   3


Q ss_pred             CccEEEEccCC---------------cccHHHHHHhhccCCEEEEEcCC
Q 021300          247 TMDGIIDTVSA---------------VHPLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       247 ~~d~v~d~~g~---------------~~~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      .||+||--...               ...+..++++|++||.++.+..+
T Consensus       217 ~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~scs  265 (317)
T d2b78a2         217 TYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA  265 (317)
T ss_dssp             CEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             CCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            69998753321               01355678899999999988764

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=83.44  E-value=0.42  Score=35.38  Aligned_cols=92  Identities=15%  Similarity=0.172  Sum_probs=55.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCC---eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc
Q 021300          184 GMHVGVVGL-GGLGHVAVKFAKAMGV---KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~~a~~~g~---~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~  259 (314)
                      |=+|.|+|+ |-+|.-.++++..+..   ++..+.........+  .+.........   .........|+++-+.+...
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~--~~~~~~~~~~~---~~~~~~~~~d~~f~~~~~~~   75 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSL--KFKDQDITIEE---TTETAFEGVDIALFSAGSST   75 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEE--EETTEEEEEEE---CCTTTTTTCSEEEECSCHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccc--cccCCcccccc---cchhhhhhhhhhhhccCccc
Confidence            347899998 9999999999988753   443333322111000  00011110000   00112236899999998877


Q ss_pred             cHHHHHHhhccCCEEEEEcCC
Q 021300          260 PLMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       260 ~~~~~~~~l~~~G~~v~~G~~  280 (314)
                      ......+.+..+-++++.+..
T Consensus        76 s~~~~~~~~~~~~~VIDlSsd   96 (154)
T d2gz1a1          76 SAKYAPYAVKAGVVVVDNTSY   96 (154)
T ss_dssp             HHHHHHHHHHTTCEEEECSST
T ss_pred             hhhHHhhhccccceehhcChh
Confidence            677777788889999999874

>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=83.39  E-value=0.63  Score=37.31  Aligned_cols=31  Identities=23%  Similarity=0.438  Sum_probs=27.8

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      ++|+|+|+.|+.++..+..+|.++.++...+
T Consensus        45 vvVIGgG~aG~~aA~~~a~~G~kv~vve~~~   75 (261)
T d1mo9a1          45 AIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP   75 (261)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCeEEEEeccC
Confidence            7788999999999999999999999998754

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=83.16  E-value=2.9  Score=31.39  Aligned_cols=90  Identities=21%  Similarity=0.232  Sum_probs=54.4

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHc---CCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERL---GADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~---ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      +|.|+|+ |-+|.-.++++..+. .++..+......-..+.+.+   -.+..+...+++.   .....|++|-+.++.. 
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~~---~~~~~dvvf~a~p~~~-   78 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEK---VSKNCDVLFTALPAGA-   78 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHH---HHHHCSEEEECCSTTH-
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccCHhH---hccccceEEEccccHH-
Confidence            5889998 999999999998874 46666654433222222111   1222233333332   2236999999998875 


Q ss_pred             HHHHHHhhccCCEEEEEcCC
Q 021300          261 LMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       261 ~~~~~~~l~~~G~~v~~G~~  280 (314)
                      ....... ..+-++++++..
T Consensus        79 s~~~~~~-~~~~~VIDlSad   97 (176)
T d1vkna1          79 SYDLVRE-LKGVKIIDLGAD   97 (176)
T ss_dssp             HHHHHTT-CCSCEEEESSST
T ss_pred             HHHHHHh-hccceEEecCcc
Confidence            3444443 356788888664

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=83.09  E-value=1  Score=36.78  Aligned_cols=32  Identities=22%  Similarity=0.206  Sum_probs=26.6

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS  216 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~  216 (314)
                      .+|||.|+ |.+|...+..+...|..++++.+.
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~   35 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR   35 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc
Confidence            47999998 999999999998889887765443

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=83.09  E-value=0.56  Score=40.17  Aligned_cols=32  Identities=25%  Similarity=0.347  Sum_probs=25.7

Q ss_pred             EEEEcCChHHHHHHHHHHH------CCCeEEEEeCChh
Q 021300          187 VGVVGLGGLGHVAVKFAKA------MGVKVTVISTSPS  218 (314)
Q Consensus       187 vlI~Gag~vG~~a~~~a~~------~g~~vi~v~~~~~  218 (314)
                      |+|+|+|+.|++|+..++.      .|.+|.++.+...
T Consensus        35 ViIVGgGPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~~   72 (380)
T d2gmha1          35 VVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH   72 (380)
T ss_dssp             EEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSS
T ss_pred             EEEECCCHHHHHHHHHHHhhhhhhcCCCEEEEEcCCCC
Confidence            7888999999877765553      6899999998753

>d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=82.98  E-value=6  Score=27.87  Aligned_cols=84  Identities=15%  Similarity=0.144  Sum_probs=54.7

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh------------hhHHHHHHHcCCcEEecCCCH----HHHH-
Q 021300          181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP------------SKKSEAIERLGADSFLVSRDQ----DEMQ-  242 (314)
Q Consensus       181 ~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~------------~~~~~~~~~~ga~~~v~~~~~----~~~~-  242 (314)
                      +.+..+|+|.|- |.-|.+..+..+.+|-+++.-+...            ....++.++.+++.-+.+-.+    |.+. 
T Consensus        12 i~k~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtPgKgG~~~~giPVf~tV~eA~~~~~~daSvIfVPp~~a~dAi~E   91 (130)
T d1euca1          12 VDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTHLGLPVFNTVKEAKEQTGATASVIYVPPPFAAAAINE   91 (130)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCHHHHHHHHHH
T ss_pred             EcCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeeccCCCCccccCccchhhHHHHHHhcCCcEEEEecCHHHHHHHHHH
Confidence            678889999997 9999999999999999988766542            234566666676654444443    2222 


Q ss_pred             HHcCCccEEEEccCCcccHHHHH
Q 021300          243 AAMGTMDGIIDTVSAVHPLMPLI  265 (314)
Q Consensus       243 ~~~~~~d~v~d~~g~~~~~~~~~  265 (314)
                      .+..+..+++--+-+.. ..+++
T Consensus        92 Ai~agI~liV~ITEgIP-v~Dm~  113 (130)
T d1euca1          92 AIDAEVPLVVCITEGIP-QQDMV  113 (130)
T ss_dssp             HHHTTCSEEEECCCCCC-HHHHH
T ss_pred             HHhCCCCEEEEecCCCC-HHHHH
Confidence            23446766665554433 34433

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=82.76  E-value=0.21  Score=37.57  Aligned_cols=91  Identities=20%  Similarity=0.304  Sum_probs=51.2

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHc----CCcE--EecCCCHHHHHHHcCCccEEEEccCC
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERL----GADS--FLVSRDQDEMQAAMGTMDGIIDTVSA  257 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~----ga~~--~v~~~~~~~~~~~~~~~d~v~d~~g~  257 (314)
                      +|.|.|+ |-+|++.++.+... +.+++.....+... .+-+..    +...  +...   +...+....+|+++|.+..
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~-~~g~d~~~~~~~~~~~~~~~---~~~~~~~~~~DViIDFs~p   81 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSS-LLGSDAGELAGAGKTGVTVQ---SSLDAVKDDFDVFIDFTRP   81 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCT-TCSCCTTCSSSSSCCSCCEE---SCSTTTTTSCSEEEECSCH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccch-hccchhhhhhccccCCceee---ccHHHHhcccceEEEeccH
Confidence            5788897 99999999998876 55665444332211 000000    1000  0000   1111233467888887665


Q ss_pred             cccHHHHHHhhccCCEEEEEcCCC
Q 021300          258 VHPLMPLIGLLKSQGKLVLVGAPE  281 (314)
Q Consensus       258 ~~~~~~~~~~l~~~G~~v~~G~~~  281 (314)
                      . .+...++.....|+=+.+|.++
T Consensus        82 ~-~~~~~~~~a~~~~~~~ViGTTG  104 (162)
T d1diha1          82 E-GTLNHLAFCRQHGKGMVIGTTG  104 (162)
T ss_dssp             H-HHHHHHHHHHHTTCEEEECCCC
T ss_pred             H-HHHHHHHHHHhccceeEEecCC
Confidence            4 3566667777777777777665

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.53  E-value=5.7  Score=32.41  Aligned_cols=74  Identities=16%  Similarity=0.140  Sum_probs=47.7

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh----hHHHHHHHcC------CcEE--ecCCCHHHHHHHcCCc
Q 021300          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS----KKSEAIERLG------ADSF--LVSRDQDEMQAAMGTM  248 (314)
Q Consensus       182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~----~~~~~~~~~g------a~~~--v~~~~~~~~~~~~~~~  248 (314)
                      ....++||.|+ |.+|...+..+...|.+|+++++...    ....+ +...      .-.+  .|..+...........
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~   92 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEV-RSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV   92 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHH-HHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHH-HHhhhhcccCCeeEEeeccccccccccccccc
Confidence            44578999998 99999999999999999999875221    11112 1221      1112  2444455555566678


Q ss_pred             cEEEEccC
Q 021300          249 DGIIDTVS  256 (314)
Q Consensus       249 d~v~d~~g  256 (314)
                      +.++.+..
T Consensus        93 ~~v~~~~a  100 (341)
T d1sb8a_          93 DYVLHQAA  100 (341)
T ss_dssp             SEEEECCS
T ss_pred             cccccccc
Confidence            88777654

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.20  E-value=1.1  Score=39.03  Aligned_cols=31  Identities=35%  Similarity=0.495  Sum_probs=26.5

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCC-eEEEEeC
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGV-KVTVIST  215 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~  215 (314)
                      .+|||+|+|++|..++..+...|. ++.+++.
T Consensus        38 ~kVlvvG~GglG~ei~k~L~~~Gvg~i~lvD~   69 (426)
T d1yovb1          38 CKVLVIGAGGLGCELLKNLALSGFRQIHVIDM   69 (426)
T ss_dssp             CCEEEECSSTTHHHHHHHHHTTTCCCEEEECC
T ss_pred             CeEEEECCCHHHHHHHHHHHHcCCCeEEEEEC
Confidence            569999999999999999998998 6767764

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=82.10  E-value=3.3  Score=32.28  Aligned_cols=129  Identities=14%  Similarity=0.091  Sum_probs=70.7

Q ss_pred             hhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC-----h---hh----HHHHHHHcCCcEEec
Q 021300          168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS-----P---SK----KSEAIERLGADSFLV  234 (314)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~-----~---~~----~~~~~~~~ga~~~v~  234 (314)
                      +...+.+++..+.--..++++++|+|..|...+++....+. +++.+++.     .   ..    ..++.+......   
T Consensus        10 LAgll~a~~~~g~~l~d~riv~~GAGsAg~gia~~l~~~~~~~i~~~D~~GLi~~~r~~~~~~~~~~~~~~~~~~~~---   86 (222)
T d1vl6a1          10 SAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPER---   86 (222)
T ss_dssp             HHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTC---
T ss_pred             HHHHHHHHHHhCCChhhcEEEEEChHHHHHHHHHHHHHhcccceEeecceeEEEcCcccccccHHHHHHHhhhcchh---
Confidence            34445567666655677899999999999999998887777 66666654     1   11    112211111110   


Q ss_pred             CCCHHHHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeeecc
Q 021300          235 SRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWWQH  303 (314)
Q Consensus       235 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~~~  303 (314)
                        ....+.+...+.++++-........+..+..+.+.-.+.-++.+....  .....+..+..+.-.++
T Consensus        87 --~~~~l~~~l~g~~~~~g~~~~~~~~~e~m~~~~~rPIIFpLSNPt~~~--e~~~a~~~G~ai~AtGs  151 (222)
T d1vl6a1          87 --LSGDLETALEGADFFIGVSRGNILKPEWIKKMSRKPVIFALANPVPEI--DPELAREAGAFIVATGR  151 (222)
T ss_dssp             --CCSCHHHHHTTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSSSCSS--CHHHHHHTTCSEEEESC
T ss_pred             --hhcchHhhccCcceeccccccccccHHHHhhcCCCCEEEecCCCccch--hhhhheeccceEEecCC
Confidence              001122334567777776654433445666666665555555543322  22333445555543343

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.65  E-value=2.9  Score=33.38  Aligned_cols=98  Identities=15%  Similarity=0.202  Sum_probs=54.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHH----C-C--CeEEEEeCChhhHHHHHHHcCC-----cEEecC--CCHHHH-HHH-
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKA----M-G--VKVTVISTSPSKKSEAIERLGA-----DSFLVS--RDQDEM-QAA-  244 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~----~-g--~~vi~v~~~~~~~~~~~~~~ga-----~~~v~~--~~~~~~-~~~-  244 (314)
                      .++.-+||=+|+|. |..+..+++.    . +  .++++++.++...+.+.+.+.-     ...++.  ...+.. ... 
T Consensus        38 ~~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (280)
T d1jqea_          38 TKSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRML  116 (280)
T ss_dssp             TCSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHHHT
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcchhc
Confidence            45555788888754 4344444332    2 2  3567788887776666554321     111211  111111 111 


Q ss_pred             ----cCCccEEEEccC-----C-cccHHHHHHhhccCCEEEEEcC
Q 021300          245 ----MGTMDGIIDTVS-----A-VHPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       245 ----~~~~d~v~d~~g-----~-~~~~~~~~~~l~~~G~~v~~G~  279 (314)
                          .+.||+|+-.-.     + ...+..+.++|+++|.++..-.
T Consensus       117 ~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~~  161 (280)
T d1jqea_         117 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV  161 (280)
T ss_dssp             TSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             ccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEEe
Confidence                236999886432     2 2357889999999999877744

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=81.61  E-value=1.5  Score=31.97  Aligned_cols=69  Identities=26%  Similarity=0.364  Sum_probs=43.6

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHc-------CCcEEecCCCHHHHHHHcCCccEEEEcc
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERL-------GADSFLVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~-------ga~~~v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      .+|.|+|+|.+|..++..+...|.  +++.++.++++.+.....+       +.+..+...+.    +...+.|+|+-+.
T Consensus         2 kKI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~----~~l~~adiVVita   77 (146)
T d1hyha1           2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW----AALADADVVISTL   77 (146)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG----GGGTTCSEEEECC
T ss_pred             CeEEEECcCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH----HHhccccEEEEec
Confidence            478899999999888887776663  7888887776543322222       22222222332    2235799999988


Q ss_pred             CC
Q 021300          256 SA  257 (314)
Q Consensus       256 g~  257 (314)
                      |.
T Consensus        78 G~   79 (146)
T d1hyha1          78 GN   79 (146)
T ss_dssp             SC
T ss_pred             cc
Confidence            84

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=81.60  E-value=5.2  Score=32.56  Aligned_cols=57  Identities=21%  Similarity=0.217  Sum_probs=41.1

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC--hhhHHHHHHHcCCcEEec
Q 021300          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS--PSKKSEAIERLGADSFLV  234 (314)
Q Consensus       178 ~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~--~~~~~~~~~~~ga~~~v~  234 (314)
                      .+.+.++++|+...+|.-|.+++..++.+|.+.+++...  +....+..+.+|++.+..
T Consensus        55 ~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~  113 (310)
T d1y7la1          55 DGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLT  113 (310)
T ss_dssp             TTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEE
T ss_pred             cCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEec
Confidence            344577777766677999999999999999976666543  334445567889877653

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=81.31  E-value=3.3  Score=30.80  Aligned_cols=72  Identities=22%  Similarity=0.428  Sum_probs=42.4

Q ss_pred             CCCEEEEEcCChHHHHHH---HHHH--HC-CCeEEEEeCChhhHHH-------HHHHcCCc-EEecCCCHHHHHHHcCCc
Q 021300          183 PGMHVGVVGLGGLGHVAV---KFAK--AM-GVKVTVISTSPSKKSE-------AIERLGAD-SFLVSRDQDEMQAAMGTM  248 (314)
Q Consensus       183 ~g~~vlI~Gag~vG~~a~---~~a~--~~-g~~vi~v~~~~~~~~~-------~~~~~ga~-~~v~~~~~~~~~~~~~~~  248 (314)
                      |.-+|.|+|+|.+|....   .+++  .+ +.+++.++.++++.+.       +...++.. .+....+   ..+...+.
T Consensus         1 p~mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td---~~eaL~da   77 (171)
T d1obba1           1 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMN---LDDVIIDA   77 (171)
T ss_dssp             CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESC---HHHHHTTC
T ss_pred             CCcEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCC---hhhcccCC
Confidence            567899999999985422   2332  22 3488888888765432       23334433 2222232   22344789


Q ss_pred             cEEEEccCC
Q 021300          249 DGIIDTVSA  257 (314)
Q Consensus       249 d~v~d~~g~  257 (314)
                      |+|+.+++.
T Consensus        78 d~Vv~~~~~   86 (171)
T d1obba1          78 DFVINTAMV   86 (171)
T ss_dssp             SEEEECCCT
T ss_pred             CeEeeeccc
Confidence            999988764

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.20  E-value=0.67  Score=33.81  Aligned_cols=91  Identities=14%  Similarity=0.154  Sum_probs=54.8

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHC---CCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300          185 MHVGVVGL-GGLGHVAVKFAKAM---GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (314)
Q Consensus       185 ~~vlI~Ga-g~vG~~a~~~a~~~---g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~  260 (314)
                      -+|.|+|+ |-+|+-.++++..+   ..++..+.......+.+  .+....... .+.+  .+...+.|++|-+.++...
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i--~~~~~~~~~-~~~~--~~~~~~~d~vf~a~p~~~s   77 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRM--GFAESSLRV-GDVD--SFDFSSVGLAFFAAAAEVS   77 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEE--EETTEEEEC-EEGG--GCCGGGCSEEEECSCHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcce--eeccccchh-ccch--hhhhccceEEEecCCcchh
Confidence            45889998 99999999999743   34666655543221111  011111110 0001  0112368999999988765


Q ss_pred             HHHHHHhhccCCEEEEEcCC
Q 021300          261 LMPLIGLLKSQGKLVLVGAP  280 (314)
Q Consensus       261 ~~~~~~~l~~~G~~v~~G~~  280 (314)
                      ....-.....+.++++.+..
T Consensus        78 ~~~~~~~~~~g~~VID~Ss~   97 (144)
T d2hjsa1          78 RAHAERARAAGCSVIDLSGA   97 (144)
T ss_dssp             HHHHHHHHHTTCEEEETTCT
T ss_pred             hhhccccccCCceEEeechh
Confidence            55666677788888888764

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=81.13  E-value=1.6  Score=31.40  Aligned_cols=68  Identities=15%  Similarity=0.120  Sum_probs=43.6

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHc-------CC-cEEecCCCHHHHHHHcCCccEEEEcc
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERL-------GA-DSFLVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~-------ga-~~~v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      +|.|+|+|.+|...+..+...+.  ++++++.++++.+.....+       .. ..+....+.    +...+.|+++-+.
T Consensus         2 KI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~----~~~~dadvvvita   77 (142)
T d1guza1           2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDY----ADTANSDIVIITA   77 (142)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCG----GGGTTCSEEEECC
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCCH----HHhcCCeEEEEEE
Confidence            58889999999998888888774  7888887765543222121       11 222222222    2345799999998


Q ss_pred             CC
Q 021300          256 SA  257 (314)
Q Consensus       256 g~  257 (314)
                      |.
T Consensus        78 g~   79 (142)
T d1guza1          78 GL   79 (142)
T ss_dssp             SC
T ss_pred             ec
Confidence            84

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=80.94  E-value=1.2  Score=33.97  Aligned_cols=37  Identities=24%  Similarity=0.352  Sum_probs=31.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHH
Q 021300          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA  223 (314)
Q Consensus       186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~  223 (314)
                      +|.|+|.|-+|+..+..+ +.|.+|+.++.++.+...+
T Consensus         2 kI~ViGlG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l   38 (196)
T d1dlja2           2 KIAVAGSGYVGLSLGVLL-SLQNEVTIVDILPSKVDKI   38 (196)
T ss_dssp             EEEEECCSHHHHHHHHHH-TTTSEEEEECSCHHHHHHH
T ss_pred             EEEEECCChhHHHHHHHH-HCCCcEEEEECCHHHHHHH
Confidence            588999999999877655 5699999999998887666

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.91  E-value=0.83  Score=37.90  Aligned_cols=32  Identities=25%  Similarity=0.330  Sum_probs=28.3

Q ss_pred             EE-EEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh
Q 021300          186 HV-GVVGL-GGLGHVAVKFAKAMGVKVTVISTSP  217 (314)
Q Consensus       186 ~v-lI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~  217 (314)
                      +| ||.|+ |-+|...+..+...|.+|+++++..
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~   35 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRS   35 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            57 89998 9999999999988999999998854

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=80.91  E-value=3  Score=34.33  Aligned_cols=98  Identities=20%  Similarity=0.193  Sum_probs=59.4

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHH---HHHcCCcE-EecCCCHHHHHHHcCCccEEEE-
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEA---IERLGADS-FLVSRDQDEMQAAMGTMDGIID-  253 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~---~~~~ga~~-~v~~~~~~~~~~~~~~~d~v~d-  253 (314)
                      +++|++||=.-|++=| -+.+++...+  ..+++.+.++.+...+   .+++|... ++...+..........||.|+- 
T Consensus       114 ~~~g~~vlD~CAapGg-Kt~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d~~~~~~~~~~fD~ILvD  192 (313)
T d1ixka_         114 PKPGEIVADMAAAPGG-KTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLD  192 (313)
T ss_dssp             CCTTCEEEECCSSCSH-HHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEE
T ss_pred             CCccceeeecccchhh-hhHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhccccccccccccccccccccEEEEc
Confidence            6999998765443323 3455565543  4788888888776555   35567543 3333443333344557887665 


Q ss_pred             --ccCCc-------------------------ccHHHHHHhhccCCEEEEEcC
Q 021300          254 --TVSAV-------------------------HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       254 --~~g~~-------------------------~~~~~~~~~l~~~G~~v~~G~  279 (314)
                        |+|..                         ..+..+++.+++||++|..-.
T Consensus       193 aPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lVYsTC  245 (313)
T d1ixka_         193 APCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC  245 (313)
T ss_dssp             CCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred             cccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCCcEEEEeec
Confidence              34421                         135668889999998766643

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=80.74  E-value=2.8  Score=34.05  Aligned_cols=98  Identities=17%  Similarity=0.180  Sum_probs=58.1

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHH---HHHcCCcE-EecCCCHHHHHH-HcCCccEEEE-
Q 021300          181 DKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEA---IERLGADS-FLVSRDQDEMQA-AMGTMDGIID-  253 (314)
Q Consensus       181 ~~~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~---~~~~ga~~-~v~~~~~~~~~~-~~~~~d~v~d-  253 (314)
                      .++|++||=.-|++=|. +.+++... +.++++++.++.+...+   .+++|.+. ++...+...... ..+.||.|+- 
T Consensus       100 ~~~g~~vLD~CAaPGgK-t~~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~~~~~~~~~~~fd~IL~D  178 (284)
T d1sqga2         100 PQNGEHILDLCAAPGGK-TTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLD  178 (284)
T ss_dssp             CCTTCEEEEESCTTCHH-HHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEE
T ss_pred             ccccceeEeccCccccc-hhhhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccccccchhcccccccEEEEe
Confidence            68999998775444333 34444443 46899999888876444   45677653 333333222222 2346887654 


Q ss_pred             --ccCCc-------------------------ccHHHHHHhhccCCEEEEEcC
Q 021300          254 --TVSAV-------------------------HPLMPLIGLLKSQGKLVLVGA  279 (314)
Q Consensus       254 --~~g~~-------------------------~~~~~~~~~l~~~G~~v~~G~  279 (314)
                        |+|..                         ..+..+++.+++||++|..-.
T Consensus       179 aPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYsTC  231 (284)
T d1sqga2         179 APCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC  231 (284)
T ss_dssp             CCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred             ccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEeee
Confidence              34421                         125557778999998776644

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=80.61  E-value=5.8  Score=32.99  Aligned_cols=31  Identities=26%  Similarity=0.355  Sum_probs=24.9

Q ss_pred             CCEEEEEcC-ChHHHHHHH-HHHHCCCeEEEEe
Q 021300          184 GMHVGVVGL-GGLGHVAVK-FAKAMGVKVTVIS  214 (314)
Q Consensus       184 g~~vlI~Ga-g~vG~~a~~-~a~~~g~~vi~v~  214 (314)
                      +.+|||.|+ |-+|...+. +++..|.+|++++
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D   34 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD   34 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEe
Confidence            568999998 999977665 5566789999886

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=80.37  E-value=0.91  Score=38.25  Aligned_cols=71  Identities=11%  Similarity=0.110  Sum_probs=42.8

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC-hh--hHHHHHHHcC-C---cE-EecCCCHHHHHHHcC--CccEEEEc
Q 021300          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PS--KKSEAIERLG-A---DS-FLVSRDQDEMQAAMG--TMDGIIDT  254 (314)
Q Consensus       186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~-~~--~~~~~~~~~g-a---~~-~v~~~~~~~~~~~~~--~~d~v~d~  254 (314)
                      +|||.|+ |.+|...+..+...|.++++..+. ..  ....+ +.+. .   +. ..|-.+++.+.++..  .+|+||++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHH-HhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            6999997 999999999888888875544332 11  11111 1121 1   11 124455655555433  69999999


Q ss_pred             cCC
Q 021300          255 VSA  257 (314)
Q Consensus       255 ~g~  257 (314)
                      ++.
T Consensus        81 Aa~   83 (361)
T d1kewa_          81 AAE   83 (361)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            864

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.04  E-value=1.9  Score=31.80  Aligned_cols=92  Identities=16%  Similarity=0.237  Sum_probs=56.7

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHc-------CCcEEecCCCHHHHHHHcCCccEEEEcc
Q 021300          185 MHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERL-------GADSFLVSRDQDEMQAAMGTMDGIIDTV  255 (314)
Q Consensus       185 ~~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~-------ga~~~v~~~~~~~~~~~~~~~d~v~d~~  255 (314)
                      .+|.|+|+|.+|..++..+...+.  ++++++.+++..+..+..+       +...++...+.    +...+.|+|+-+.
T Consensus        20 ~KI~IIGaG~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~----~~~~~adivvita   95 (159)
T d2ldxa1          20 CKITVVGVGDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY----NVSANSKLVIITA   95 (159)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG----GGGTTEEEEEECC
T ss_pred             CeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch----hhhccccEEEEec
Confidence            579999999999999988887765  7888887765543222222       22333322332    2235789999998


Q ss_pred             CCcc---------------cHHHH---HHhhccCCEEEEEcCC
Q 021300          256 SAVH---------------PLMPL---IGLLKSQGKLVLVGAP  280 (314)
Q Consensus       256 g~~~---------------~~~~~---~~~l~~~G~~v~~G~~  280 (314)
                      |...               .+...   +....++|.++.+..|
T Consensus        96 g~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvtNP  138 (159)
T d2ldxa1          96 GARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTNP  138 (159)
T ss_dssp             SCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECSSS
T ss_pred             ccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeCCc
Confidence            8531               11122   2233677888877653