Citrus Sinensis ID: 021325

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310----
MAAAAVAGSLTAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERLDLFWPDRFRKWLPSSSKVRNQQQESELVSLKVEDQQ
cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcHHHHHHHHHHHccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccc
cccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcHHHHHHHccccccccccccHHHcccccccccc
MAAAAVAGSLTAHDRRILTALNtgasslsfvGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFsivgdpskgffcsaqgystHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAMFHLYVWGTSLVVTVVRSfgndhrhlgvwcwtqtgrtgkaVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKAlnrwgyypliligswafgtinrihdfiepghkiFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERldlfwpdrfrkwlpssskvrnQQQESELVSLKVEDQQ
maaaavagsltahdrRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERLDLFWPDRFRKWLPssskvrnqqqeselvslkvedqq
MAAAAVAGSLTAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERLDLFWPDRFRKWLPSSSKVRNQQQESELVSLKVEDQQ
**********TAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERLDLFWPDRFRKWL************************
*************DRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFITFYAPLWGAILYNGFTYFQVIRML********************ALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERLDLFWPD******************************
**********TAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERLDLFWPDRFRKWLPS**********************
********SLTAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERLDLFWPDRFRKWLPS**********************
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MAAAAVAGSLTAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERLDLFWPDRFRKWLPSSSKVRNQQQESELVSLKVEDQQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query314 2.2.26 [Sep-21-2011]
O04714326 G-protein coupled recepto yes no 0.996 0.960 0.814 1e-152
Q54U75369 Cyclic AMP receptor-like yes no 0.840 0.715 0.25 6e-15
Q54MC6306 Latrophilin receptor-like no no 0.834 0.856 0.254 4e-11
P35352 490 Cyclic AMP receptor 3 OS= no no 0.799 0.512 0.231 5e-09
Q54WN6 515 Cyclic AMP receptor-like no no 0.391 0.238 0.297 5e-09
P34907375 Cyclic AMP receptor 2 OS= no no 0.608 0.509 0.251 1e-08
P13773392 Cyclic AMP receptor 1 OS= no no 0.452 0.362 0.275 1e-07
Q9TX43 443 Cyclic AMP receptor 4 OS= no no 0.487 0.345 0.231 4e-07
Q6UUW6361 Cyclic AMP receptor-like no no 0.557 0.484 0.215 1e-05
>sp|O04714|GCR1_ARATH G-protein coupled receptor 1 OS=Arabidopsis thaliana GN=GCR1 PE=1 SV=1 Back     alignment and function desciption
 Score =  537 bits (1384), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 264/324 (81%), Positives = 282/324 (87%), Gaps = 11/324 (3%)

Query: 2   AAAAVAGSLTAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSD 61
           A     G LTA DR I+TA+NTGASSLSFVGS FIVLCYCLFKELRKFSFKLVF+LALSD
Sbjct: 3   AVLTAGGGLTAGDRSIITAINTGASSLSFVGSAFIVLCYCLFKELRKFSFKLVFYLALSD 62

Query: 62  MLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAM 121
           MLCSFF IVGDPSKGF C AQGY+THFFCVASFLWTTTIAFTLHRTVV+HKTDVEDLEAM
Sbjct: 63  MLCSFFLIVGDPSKGFICYAQGYTTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLEAM 122

Query: 122 FHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFITFYAPLWGAILYNGFTY 181
           FHLYVWGTSLVVTV+RSFGN+H HLG WCWTQTG  GKAVHF+TFYAPLWGAILYNGFTY
Sbjct: 123 FHLYVWGTSLVVTVIRSFGNNHSHLGPWCWTQTGLKGKAVHFLTFYAPLWGAILYNGFTY 182

Query: 182 FQVIRMLNNATRVAVGMSDRAYQFD----MKALNRWGYYPLILIGSWAFGTINRIHDFIE 237
           FQVIRML NA R+AVGMSDR  QFD    +K LNRWGYYPLILIGSWAFGTINRIHDFIE
Sbjct: 183 FQVIRMLRNARRMAVGMSDRVDQFDNRAELKVLNRWGYYPLILIGSWAFGTINRIHDFIE 242

Query: 238 PGHKIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERLDLFWPDRFRKWLPSSSKVR 297
           PGHKIFWL+ LDVGTAALMGLFNSIAYG NSSVRRAIHERL+LF P+R  +WLPS+ + +
Sbjct: 243 PGHKIFWLSVLDVGTAALMGLFNSIAYGFNSSVRRAIHERLELFLPERLYRWLPSNFRPK 302

Query: 298 NQ-------QQESELVSLKVEDQQ 314
           N        QQ SE+VSLK EDQQ
Sbjct: 303 NHLILHQQQQQRSEMVSLKTEDQQ 326
Together with GPA1, may regulate the cell cycle via a signaling cascade that uses phosphatidylinositol-specific phospholipase C (PI-PLC) as an effector and inositol 1,4,5-trisphosphate(IP(3)) as a second messenger. Acts as a negative regulator of GPA1-mediated abscisic acid (ABA) responses in guard cells, and together with GPA1 and GB1 during seed germination and early seedling development. Promotes PI-PLC activity and IP(3) accumulation. Involved in the blue light (BL) signaling. Together with GPA1 and ADT3, required for BL-mediated synthesis of phenylpyruvate and subsequently of phenylalanine (Phe), in etiolated seedlings. Probably involved in cytokinin signal transduction. Plays a positive role in gibberellin- (GA) and brassinosteroid- (BR) regulated seed germination, probably independently of an heterotrimeric G-protein. Mediates seed dormancy abolishion, and promotes seed germination and flowering.
Arabidopsis thaliana (taxid: 3702)
>sp|Q54U75|CRLA_DICDI Cyclic AMP receptor-like protein A OS=Dictyostelium discoideum GN=crlA PE=2 SV=1 Back     alignment and function description
>sp|Q54MC6|LRLA_DICDI Latrophilin receptor-like protein A OS=Dictyostelium discoideum GN=lrlA PE=3 SV=1 Back     alignment and function description
>sp|P35352|CAR3_DICDI Cyclic AMP receptor 3 OS=Dictyostelium discoideum GN=carC PE=2 SV=1 Back     alignment and function description
>sp|Q54WN6|CRLG_DICDI Cyclic AMP receptor-like protein G OS=Dictyostelium discoideum GN=crlG PE=3 SV=1 Back     alignment and function description
>sp|P34907|CAR2_DICDI Cyclic AMP receptor 2 OS=Dictyostelium discoideum GN=carB PE=2 SV=2 Back     alignment and function description
>sp|P13773|CAR1_DICDI Cyclic AMP receptor 1 OS=Dictyostelium discoideum GN=carA-1 PE=1 SV=1 Back     alignment and function description
>sp|Q9TX43|CAR4_DICDI Cyclic AMP receptor 4 OS=Dictyostelium discoideum GN=carD PE=2 SV=2 Back     alignment and function description
>sp|Q6UUW6|CRLC_DICDI Cyclic AMP receptor-like protein C OS=Dictyostelium discoideum GN=crlC PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query314
225429712319 PREDICTED: G-protein coupled receptor 1 1.0 0.984 0.827 1e-157
255556598319 Cyclic AMP receptor, putative [Ricinus c 1.0 0.984 0.824 1e-155
441433483319 putative G-protein-coupled receptor [Mal 0.984 0.968 0.827 1e-153
449447185318 PREDICTED: G-protein coupled receptor 1- 0.987 0.974 0.806 1e-150
15221138326 G-protein-coupled receptor 1 [Arabidopsi 0.996 0.960 0.814 1e-150
312282219328 unnamed protein product [Thellungiella h 0.996 0.954 0.806 1e-150
2104224326 putative G protein coupled receptor [Ara 0.996 0.960 0.811 1e-150
20466810326 putative G protein-coupled receptor [Ara 0.996 0.960 0.811 1e-150
297852446326 G-protein-coupled receptor 1 [Arabidopsi 0.996 0.960 0.808 1e-149
356563948318 PREDICTED: G-protein coupled receptor 1- 0.990 0.977 0.831 1e-148
>gi|225429712|ref|XP_002281957.1| PREDICTED: G-protein coupled receptor 1 [Vitis vinifera] gi|296081730|emb|CBI20735.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  559 bits (1440), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 264/319 (82%), Positives = 287/319 (89%), Gaps = 5/319 (1%)

Query: 1   MAAAAVAGSLTAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALS 60
           M      G+L AHDR+IL A+N GASSLSFVGSGFIVLCY LFKELRKFSFKLVF+LALS
Sbjct: 1   MTMTMATGNLAAHDRQILQAVNGGASSLSFVGSGFIVLCYLLFKELRKFSFKLVFYLALS 60

Query: 61  DMLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEA 120
           DMLCSFFSI+GDPS+GFFC AQGY+THFFCVASFLWTTTIAFTLHRTVV+HKTDVEDLE+
Sbjct: 61  DMLCSFFSIIGDPSQGFFCYAQGYTTHFFCVASFLWTTTIAFTLHRTVVRHKTDVEDLES 120

Query: 121 MFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFITFYAPLWGAILYNGFT 180
           MFHLYVWGTSLV+TV+RS GNDH HLGVWCW Q G+TGK VHFITFY PLWGAIL+NGFT
Sbjct: 121 MFHLYVWGTSLVMTVIRSIGNDHGHLGVWCWEQRGQTGKVVHFITFYVPLWGAILFNGFT 180

Query: 181 YFQVIRMLNNATRVAVGMSDRAYQFD-----MKALNRWGYYPLILIGSWAFGTINRIHDF 235
           YFQVIRMLNNATR+AVGMS+R YQ D     MKALNRWGYYPLILIGSWAFGTINR+HDF
Sbjct: 181 YFQVIRMLNNATRMAVGMSERGYQLDARADNMKALNRWGYYPLILIGSWAFGTINRVHDF 240

Query: 236 IEPGHKIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERLDLFWPDRFRKWLPSSSK 295
           IEPGHKIFWL+ LDVG AALMGLFNSIAYGLNSSVRRAI+ERLDLFWP++ R+W P SSK
Sbjct: 241 IEPGHKIFWLSVLDVGMAALMGLFNSIAYGLNSSVRRAIYERLDLFWPEKLRRWFPCSSK 300

Query: 296 VRNQQQESELVSLKVEDQQ 314
            R QQQESELVSLK++D Q
Sbjct: 301 SRGQQQESELVSLKIQDPQ 319

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255556598|ref|XP_002519333.1| Cyclic AMP receptor, putative [Ricinus communis] gi|223541648|gb|EEF43197.1| Cyclic AMP receptor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|441433483|gb|AGC31663.1| putative G-protein-coupled receptor [Malus x domestica] Back     alignment and taxonomy information
>gi|449447185|ref|XP_004141349.1| PREDICTED: G-protein coupled receptor 1-like [Cucumis sativus] gi|449486726|ref|XP_004157382.1| PREDICTED: G-protein coupled receptor 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|15221138|ref|NP_175261.1| G-protein-coupled receptor 1 [Arabidopsis thaliana] gi|75219002|sp|O04714.1|GCR1_ARATH RecName: Full=G-protein coupled receptor 1 gi|5733881|gb|AAD49769.1|AC007932_17 Identical to a putative G-protein-coupled receptor from Arabidopsis thaliana gb|U95143. EST gb|T04329 comes from this gene [Arabidopsis thaliana] gi|2072986|gb|AAC49961.1| putative G-protein-coupled receptor [Arabidopsis thaliana] gi|2072988|gb|AAC49962.1| putative G-protein-coupled receptor [Arabidopsis thaliana] gi|110736896|dbj|BAF00405.1| putative G-protein-coupled receptor [Arabidopsis thaliana] gi|332194149|gb|AEE32270.1| G-protein-coupled receptor 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|312282219|dbj|BAJ33975.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|2104224|emb|CAA72145.1| putative G protein coupled receptor [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|20466810|gb|AAM20722.1| putative G protein-coupled receptor [Arabidopsis thaliana] gi|23198212|gb|AAN15633.1| putative G protein-coupled receptor [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297852446|ref|XP_002894104.1| G-protein-coupled receptor 1 [Arabidopsis lyrata subsp. lyrata] gi|297339946|gb|EFH70363.1| G-protein-coupled receptor 1 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356563948|ref|XP_003550219.1| PREDICTED: G-protein coupled receptor 1-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query314
TAIR|locus:2007710326 GCR1 "G-protein-coupled recept 1.0 0.963 0.819 4.2e-143
DICTYBASE|DDB_G0280983369 crlA "G-protein-coupled recept 0.872 0.742 0.232 6.2e-16
DICTYBASE|DDB_G0286037306 lrlA "latrophilin receptor-lik 0.824 0.846 0.255 1e-15
ZFIN|ZDB-GENE-070912-347349 si:dkey-100n23.5 "si:dkey-100n 0.726 0.653 0.240 1.9e-14
DICTYBASE|DDB_G0277829 490 carC "cAMP receptor 3" [Dictyo 0.802 0.514 0.232 1.2e-12
UNIPROTKB|E1C737342 GPR157 "Uncharacterized protei 0.519 0.476 0.274 4.1e-12
UNIPROTKB|F1MUY8327 GPR157 "Uncharacterized protei 0.471 0.452 0.287 4.5e-12
MGI|MGI:2442046330 Gpr157 "G protein-coupled rece 0.522 0.496 0.286 4.7e-12
RGD|1311096330 Gpr157 "G protein-coupled rece 0.519 0.493 0.288 1.1e-11
UNIPROTKB|E7ENU8270 GPR157 "Probable G-protein-cou 0.522 0.607 0.286 2.1e-11
TAIR|locus:2007710 GCR1 "G-protein-coupled receptor 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1399 (497.5 bits), Expect = 4.2e-143, P = 4.2e-143
 Identities = 267/326 (81%), Positives = 286/326 (87%)

Query:     1 MAAAAVAGS-LTAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLAL 59
             M+A   AG  LTA DR I+TA+NTGASSLSFVGS FIVLCYCLFKELRKFSFKLVF+LAL
Sbjct:     1 MSAVLTAGGGLTAGDRSIITAINTGASSLSFVGSAFIVLCYCLFKELRKFSFKLVFYLAL 60

Query:    60 SDMLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLE 119
             SDMLCSFF IVGDPSKGF C AQGY+THFFCVASFLWTTTIAFTLHRTVV+HKTDVEDLE
Sbjct:    61 SDMLCSFFLIVGDPSKGFICYAQGYTTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLE 120

Query:   120 AMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFITFYAPLWGAILYNGF 179
             AMFHLYVWGTSLVVTV+RSFGN+H HLG WCWTQTG  GKAVHF+TFYAPLWGAILYNGF
Sbjct:   121 AMFHLYVWGTSLVVTVIRSFGNNHSHLGPWCWTQTGLKGKAVHFLTFYAPLWGAILYNGF 180

Query:   180 TYFQVIRMLNNATRVAVGMSDRAYQFD----MKALNRWGYYPLILIGSWAFGTINRIHDF 235
             TYFQVIRML NA R+AVGMSDR  QFD    +K LNRWGYYPLILIGSWAFGTINRIHDF
Sbjct:   181 TYFQVIRMLRNARRMAVGMSDRVDQFDNRAELKVLNRWGYYPLILIGSWAFGTINRIHDF 240

Query:   236 IEPGHKIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERLDLFWPDRFRKWLPSSSK 295
             IEPGHKIFWL+ LDVGTAALMGLFNSIAYG NSSVRRAIHERL+LF P+R  +WLPS+ +
Sbjct:   241 IEPGHKIFWLSVLDVGTAALMGLFNSIAYGFNSSVRRAIHERLELFLPERLYRWLPSNFR 300

Query:   296 VRN-------QQQESELVSLKVEDQQ 314
              +N       QQQ SE+VSLK EDQQ
Sbjct:   301 PKNHLILHQQQQQRSEMVSLKTEDQQ 326
GO:0004888 "transmembrane signaling receptor activity" evidence=IEA
GO:0004930 "G-protein coupled receptor activity" evidence=IEA;ISS
GO:0005886 "plasma membrane" evidence=ISM;IDA
GO:0007166 "cell surface receptor signaling pathway" evidence=IEA
GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0030552 "cAMP binding" evidence=IEA
GO:0000278 "mitotic cell cycle" evidence=IDA
GO:0009908 "flower development" evidence=IMP
GO:0010231 "maintenance of seed dormancy" evidence=IMP
GO:0007202 "activation of phospholipase C activity" evidence=IMP
GO:0032960 "regulation of inositol trisphosphate biosynthetic process" evidence=IMP
GO:0005515 "protein binding" evidence=IPI
GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP
GO:0044214 "fully spanning plasma membrane" evidence=NAS
GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IMP
GO:0009939 "positive regulation of gibberellic acid mediated signaling pathway" evidence=IMP
GO:0006571 "tyrosine biosynthetic process" evidence=IMP
GO:0009094 "L-phenylalanine biosynthetic process" evidence=IMP
GO:0010244 "response to low fluence blue light stimulus by blue low-fluence system" evidence=IMP
GO:0009845 "seed germination" evidence=IEP
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0009738 "abscisic acid mediated signaling pathway" evidence=IMP
GO:0009785 "blue light signaling pathway" evidence=IMP
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0009735 "response to cytokinin stimulus" evidence=IMP
DICTYBASE|DDB_G0280983 crlA "G-protein-coupled receptor (GPCR) family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0286037 lrlA "latrophilin receptor-like protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070912-347 si:dkey-100n23.5 "si:dkey-100n23.5" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0277829 carC "cAMP receptor 3" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|E1C737 GPR157 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1MUY8 GPR157 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:2442046 Gpr157 "G protein-coupled receptor 157" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1311096 Gpr157 "G protein-coupled receptor 157" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E7ENU8 GPR157 "Probable G-protein-coupled receptor 157" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O04714GCR1_ARATHNo assigned EC number0.81480.99680.9601yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query314
pfam05462305 pfam05462, Dicty_CAR, Slime mold cyclic AMP recept 3e-10
>gnl|CDD|147574 pfam05462, Dicty_CAR, Slime mold cyclic AMP receptor Back     alignment and domain information 
 Score = 59.8 bits (145), Expect = 3e-10
 Identities = 65/258 (25%), Positives = 108/258 (41%), Gaps = 38/258 (14%)

Query: 29  SFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIV-----GDPSKGFFCSAQG 83
           S +G   +++ +   K LR    K++    L+ +L    S +          GF C    
Sbjct: 21  SIIGCFLVLIGFWRLKLLRNHITKVISCFCLTSLLKDLISTILTLTNSAQYNGFPCYLYA 80

Query: 84  YSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAMFHLYVWGTSLVVTVVRSFGNDH 143
               +  +A +LWT  +AF+++  +V+ + + E  E  + L  WG  L+ T++    N  
Sbjct: 81  IVITYGSLACWLWTLCLAFSIYNLIVKREPEPEKFEKYYFLVCWGLPLISTIIMLSKNTI 140

Query: 144 RHLGVWCWTQTGRTGKAVHFITFYAP---LWG--AILY---NGFTYFQVIRMLNNATRVA 195
             +G WCW      G    F  FY P   +WG  AIL    + +TY QVIR         
Sbjct: 141 EPVGNWCWIGEQYVG--YRFGLFYGPFFIIWGTSAILVGLTSRYTY-QVIRN-------- 189

Query: 196 VGMSDR-----AYQFDMKALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWLTFLDV 250
             +SD       YQF  K +N    Y ++ +  W F  +NRI + +  G+       L  
Sbjct: 190 -SVSDNKDKHMTYQF--KLIN----YIIVFLVCWVFAVVNRILNGL--GYFPTAPNILHT 240

Query: 251 GTAALMGLFNSIAYGLNS 268
             +   G + S+ +  N+
Sbjct: 241 YLSVSHGFYASVTFIYNN 258

This family consists of cyclic AMP receptor (CAR) proteins from slime molds. CAR proteins are responsible for controlling development in Dictyostelium discoideum. Length = 305

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 314
PF05462303 Dicty_CAR: Slime mold cyclic AMP receptor 100.0
KOG4219423 consensus G protein-coupled receptor [Signal trans 99.98
PHA03234338 DNA packaging protein UL33; Provisional 99.97
PHA03235409 DNA packaging protein UL33; Provisional 99.96
PHA02834323 chemokine receptor-like protein; Provisional 99.96
KOG4193610 consensus G protein-coupled receptors [Signal tran 99.95
PHA02638417 CC chemokine receptor-like protein; Provisional 99.95
PF02101405 Ocular_alb: Ocular albinism type 1 protein; InterP 99.94
PF00001257 7tm_1: 7 transmembrane receptor (rhodopsin family) 99.93
PHA03087335 G protein-coupled chemokine receptor-like protein; 99.93
KOG4220503 consensus Muscarinic acetylcholine receptor [Signa 99.93
KOG4564473 consensus Adenylate cyclase-coupled calcitonin rec 99.9
PF00002242 7tm_2: 7 transmembrane receptor (Secretin family); 99.9
KOG2087363 consensus Glycoprotein hormone receptor [Signal tr 99.84
PF11710201 Git3: G protein-coupled glucose receptor regulatin 99.81
KOG42892531 consensus Cadherin EGF LAG seven-pass G-type recep 99.7
PF01534328 Frizzled: Frizzled/Smoothened family membrane regi 99.68
PF10320257 7TM_GPCR_Srsx: Serpentine type 7TM GPCR chemorecep 99.66
PF10328274 7TM_GPCR_Srx: Serpentine type 7TM GPCR chemorecept 99.36
PF05296303 TAS2R: Mammalian taste receptor protein (TAS2R); I 99.18
PF10324318 7TM_GPCR_Srw: Serpentine type 7TM GPCR chemorecept 99.12
PF10323283 7TM_GPCR_Srv: Serpentine type 7TM GPCR chemorecept 99.01
PF10321313 7TM_GPCR_Srt: Serpentine type 7TM GPCR chemorecept 99.0
PF10317292 7TM_GPCR_Srd: Serpentine type 7TM GPCR chemorecept 98.95
PF10292324 7TM_GPCR_Srab: Serpentine type 7TM GPCR receptor c 98.62
PF1197076 Git3_C: G protein-coupled glucose receptor regulat 98.61
PF02076283 STE3: Pheromone A receptor; InterPro: IPR001499 G- 98.33
PF02118275 Srg: Srg family chemoreceptor; InterPro: IPR000609 97.92
PF10327303 7TM_GPCR_Sri: Serpentine type 7TM GPCR chemorecept 97.82
PF10319310 7TM_GPCR_Srj: Serpentine type 7TM GPCR chemorecept 97.81
PF10318302 7TM_GPCR_Srh: Serpentine type 7TM GPCR chemorecept 97.38
PF04789305 DUF621: Protein of unknown function (DUF621); Inte 97.32
KOG3577556 consensus Smoothened and related G-protein-coupled 97.25
PF03402265 V1R: Vomeronasal organ pheromone receptor family, 97.18
PF10326307 7TM_GPCR_Str: Serpentine type 7TM GPCR chemorecept 97.06
PF02117328 7TM_GPCR_Sra: Serpentine type 7TM GPCR chemorecept 96.94
PF03125365 Sre: C. elegans Sre G protein-coupled chemorecepto 96.77
PF10316273 7TM_GPCR_Srbc: Serpentine type 7TM GPCR chemorecep 96.18
PF06681226 DUF1182: Protein of unknown function (DUF1182); In 94.84
PF02175236 7TM_GPCR_Srb: Serpentine type 7TM GPCR chemorecept 91.41
PF10322307 7TM_GPCR_Sru: Serpentine type 7TM GPCR chemorecept 87.29
>PF05462 Dicty_CAR: Slime mold cyclic AMP receptor Back     alignment and domain information 
Probab=100.00  E-value=8.8e-39  Score=275.49  Aligned_cols=262  Identities=38%  Similarity=0.700  Sum_probs=215.3

Q ss_pred             ChhHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHhh-----cCCCCCccchhhHHH
Q 021325           11 TAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIV-----GDPSKGFFCSAQGYS   85 (314)
Q Consensus        11 ~~~~~~~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~~~i~~La~adll~~~~~~~-----~~~~~~~~C~~~~~~   85 (314)
                      +++|.+++..+..+.+++|++|+++++++|...|++|++.++++++++++|++..+..++     ....++..|+++|++
T Consensus         2 ~~~~~~~~~~i~~~~s~lSllGclfiI~tf~~~k~~r~~~~rli~yl~~~~ll~~v~~~~~~~~~~~~~~s~lC~~Qafl   81 (303)
T PF05462_consen    2 VKQQIRTLYAIELVASVLSLLGCLFIIITFCLFKRLRKPINRLIFYLSIANLLTNVASMIMTLSPSAGENSFLCQFQAFL   81 (303)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHhHH
Confidence            467889999999999999999999999999999999999999999999999997765433     123477899999999


Q ss_pred             HHHHhHhHHHHHHHHHHHHHHHHhhcCCchhhhhhhhhhHhhHHHHHHHHHHHhcCCCCCCCCceeeecCCCCchHHHHH
Q 021325           86 THFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFIT  165 (314)
Q Consensus        86 ~~~~~~~s~~~l~~ia~~~y~~i~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~  165 (314)
                      .|++..++++|.++||++.|..++++..+.++.+++|++++||+|++.+++++..+.|++.+.|||++++.  ..+++..
T Consensus        82 iq~f~~as~lWt~~iA~nly~~~~~~~~~~~k~e~~Y~l~~wGiPli~a~i~l~~~~~g~~G~WCWI~~~~--~~~r~~l  159 (303)
T PF05462_consen   82 IQFFMLASFLWTLCIAFNLYLTFVKRYDELEKLEKYYHLVCWGIPLIPAVIPLIGNDYGPAGNWCWIKPEW--DVWRFAL  159 (303)
T ss_pred             HHHhhHHHHHHHHHHHHHhhheeEEcCccHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCceeecCCC--cchHHHH
Confidence            99999999999999999999999877667789999999999999999999999988999999999999874  3468889


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCchHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCchHHH
Q 021325          166 FYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWL  245 (314)
Q Consensus       166 ~~~p~~~~~~~~~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~i~W~p~~i~~~~~~~~~~~~~~~~  245 (314)
                      ||+|+++++.++.+++....+..++..+  .+.++++++ +.|...++..|+++|++||+|+.++|+.+.++.  .+.++
T Consensus       160 fY~Pl~ii~~~~~ilv~i~~~~~y~~~~--~~~sd~~~~-~~~~~~kL~~Yp~ifiicw~fa~INRI~~~~~~--~~~~l  234 (303)
T PF05462_consen  160 FYIPLWIIIIISAILVGITMRYIYRVIR--NGVSDNKDK-HLKYQLKLVNYPLIFIICWIFATINRIYNFIGK--NPFWL  234 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHc--cccchhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CchHH
Confidence            9999988777666554444433333222  223333322 233344677899999999999999999999874  35789


Q ss_pred             HHHHHHhhhhhhHHHHHhhccchhH-HHHHHHHHh
Q 021325          246 TFLDVGTAALMGLFNSIAYGLNSSV-RRAIHERLD  279 (314)
Q Consensus       246 ~~l~~~l~~~~g~~n~iiy~~~~~~-~~~~r~~~~  279 (314)
                      .+++..++++||++|+++|+++++. +|-+...+.
T Consensus       235 ~~Lh~~~s~lqGf~nsivy~~n~~~~~~~~~~~~~  269 (303)
T PF05462_consen  235 SVLHVGFSPLQGFFNSIVYGYNNSLMWRYLGSKIL  269 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            9999999999999999999999865 444444443

>KOG4219 consensus G protein-coupled receptor [Signal transduction mechanisms] Back     alignment and domain information
>PHA03234 DNA packaging protein UL33; Provisional Back     alignment and domain information
>PHA03235 DNA packaging protein UL33; Provisional Back     alignment and domain information
>PHA02834 chemokine receptor-like protein; Provisional Back     alignment and domain information
>KOG4193 consensus G protein-coupled receptors [Signal transduction mechanisms] Back     alignment and domain information
>PHA02638 CC chemokine receptor-like protein; Provisional Back     alignment and domain information
>PF02101 Ocular_alb: Ocular albinism type 1 protein; InterPro: IPR001414 Ocular albinism type 1 (OA1) is an X-linked disorder characterised by severe impairment of visual acuity, retinal hypopigmentation and the presence of macromelanosomes Back     alignment and domain information
>PF00001 7tm_1: 7 transmembrane receptor (rhodopsin family) Rhodopsin-like GPCR superfamily signature 5-hydroxytryptamine 7 receptor signature bradykinin receptor signature gastrin receptor signature melatonin receptor signature olfactory receptor signature; InterPro: IPR000276 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PHA03087 G protein-coupled chemokine receptor-like protein; Provisional Back     alignment and domain information
>KOG4220 consensus Muscarinic acetylcholine receptor [Signal transduction mechanisms] Back     alignment and domain information
>KOG4564 consensus Adenylate cyclase-coupled calcitonin receptor [Signal transduction mechanisms] Back     alignment and domain information
>PF00002 7tm_2: 7 transmembrane receptor (Secretin family); InterPro: IPR000832 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>KOG2087 consensus Glycoprotein hormone receptor [Signal transduction mechanisms] Back     alignment and domain information
>PF11710 Git3: G protein-coupled glucose receptor regulating Gpa2; InterPro: IPR023041 This entry contains a functionally uncharacterised region belonging to the Git3 G-protein coupled receptor Back     alignment and domain information
>KOG4289 consensus Cadherin EGF LAG seven-pass G-type receptor [Signal transduction mechanisms] Back     alignment and domain information
>PF01534 Frizzled: Frizzled/Smoothened family membrane region; InterPro: IPR000539 The frizzled (fz) locus of Drosophila coordinates the cytoskeletons of epidermal cells, producing a parallel array of cuticular hairs and bristles [, ] Back     alignment and domain information
>PF10320 7TM_GPCR_Srsx: Serpentine type 7TM GPCR chemoreceptor Srsx; InterPro: IPR019424 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF10328 7TM_GPCR_Srx: Serpentine type 7TM GPCR chemoreceptor Srx; InterPro: IPR019430 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF05296 TAS2R: Mammalian taste receptor protein (TAS2R); InterPro: IPR007960 This family consists of several forms of mammalian taste receptor proteins (TAS2Rs) Back     alignment and domain information
>PF10324 7TM_GPCR_Srw: Serpentine type 7TM GPCR chemoreceptor Srw; InterPro: IPR019427 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF10323 7TM_GPCR_Srv: Serpentine type 7TM GPCR chemoreceptor Srv; InterPro: IPR019426 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF10321 7TM_GPCR_Srt: Serpentine type 7TM GPCR chemoreceptor Srt; InterPro: IPR019425 Chemoreception is mediated in Caenorhabditis elegans by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs) of proteins which are of the serpentine type [] Back     alignment and domain information
>PF10317 7TM_GPCR_Srd: Serpentine type 7TM GPCR chemoreceptor Srd; InterPro: IPR019421 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF10292 7TM_GPCR_Srab: Serpentine type 7TM GPCR receptor class ab chemoreceptor; InterPro: IPR019408 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF11970 Git3_C: G protein-coupled glucose receptor regulating Gpa2 C-term; InterPro: IPR022596 This entry contains a functionally uncharacterised region belonging to the Git3 G-protein coupled receptor Back     alignment and domain information
>PF02076 STE3: Pheromone A receptor; InterPro: IPR001499 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF02118 Srg: Srg family chemoreceptor; InterPro: IPR000609 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF10327 7TM_GPCR_Sri: Serpentine type 7TM GPCR chemoreceptor Sri; InterPro: IPR019429 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF10319 7TM_GPCR_Srj: Serpentine type 7TM GPCR chemoreceptor Srj; InterPro: IPR019423 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF10318 7TM_GPCR_Srh: Serpentine type 7TM GPCR chemoreceptor Srh; InterPro: IPR019422 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF04789 DUF621: Protein of unknown function (DUF621); InterPro: IPR006874 This is a conserved region found in uncharacterised proteins from Caenorhabditis elegans, and is noted to have possible G-protein-coupled receptor-like activity Back     alignment and domain information
>KOG3577 consensus Smoothened and related G-protein-coupled receptors [Signal transduction mechanisms] Back     alignment and domain information
>PF03402 V1R: Vomeronasal organ pheromone receptor family, V1R; InterPro: IPR004072 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF10326 7TM_GPCR_Str: Serpentine type 7TM GPCR chemoreceptor Str; InterPro: IPR019428 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF02117 7TM_GPCR_Sra: Serpentine type 7TM GPCR chemoreceptor Sra; InterPro: IPR000344 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF03125 Sre: C Back     alignment and domain information
>PF10316 7TM_GPCR_Srbc: Serpentine type 7TM GPCR chemoreceptor Srbc ; InterPro: IPR019420 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF06681 DUF1182: Protein of unknown function (DUF1182); InterPro: IPR010601 This family consists of several hypothetical proteins of around 360 residues in length and seems to be specific to Caenorhabditis elegans Back     alignment and domain information
>PF02175 7TM_GPCR_Srb: Serpentine type 7TM GPCR chemoreceptor Srb; InterPro: IPR002184 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF10322 7TM_GPCR_Sru: Serpentine type 7TM GPCR chemoreceptor Sru; InterPro: IPR003839 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query314
4grv_A 510 Neurotensin receptor type 1, lysozyme chimera; G-p 99.97
2rh1_A500 Beta-2-adrenergic receptor/T4-lysozyme chimera; GP 99.97
3v2y_A 520 Sphingosine 1-phosphate receptor 1, lysozyme CHIM; 99.97
4amj_A315 Beta-1 adrenergic receptor; membrane protein, 7TMR 99.97
3uon_A467 Human M2 muscarinic acetylcholine, receptor T4 LY 99.97
3eml_A488 Human adenosine A2A receptor/T4 lysozyme chimera; 99.97
3rze_A452 Histamine H1 receptor, lysozyme chimera; structura 99.97
2ks9_A364 Substance-P receptor; water, autodock, NK1, neurop 99.97
3vw7_A 484 Proteinase-activated receptor 1, lysozyme; high re 99.97
3pbl_A 481 D(3) dopamine receptor, lysozyme chimera; structur 99.97
4dkl_A 464 MU-type opioid receptor, lysozyme chimera; G-prote 99.97
1u19_A349 Rhodopsin; G protein-coupled receptor, membrane pr 99.97
4eiy_A447 Adenosine receptor A2A/soluble cytochrome B562 CH; 99.97
2lnl_A296 C-X-C chemokine receptor type 1; G protein coupled 99.97
2z73_A448 Rhodopsin; visual pigment, GQ-type, G-protein coup 99.97
4ea3_A434 Fusion protein of nociceptin receptor and cytochr; 99.96
3sn6_R514 Lysozyme, beta-2 adrenergic receptor; seven transm 99.96
3odu_A 502 C-X-C chemokine receptor type 4, lysozyme chimera; 99.96
2koe_A40 Human cannabinoid receptor 1 - helix 7/8 peptide; 97.15
2ki9_A33 Cannabinoid receptor 2; GPCR, G-protein coupled re 96.21
1hll_A32 Alpha-2A adrenergic receptor; helix-linker-helix, 95.64
2lot_A64 Apelin receptor; membrane protein; NMR {Homo sapie 92.73
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus} Back     alignment and structure
Probab=99.97  E-value=6.8e-31  Score=245.96  Aligned_cols=172  Identities=16%  Similarity=0.157  Sum_probs=122.2

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccc---ccchhHHHHHHHHHHHHHHHHhh---------cC--CCCCccch
Q 021325           15 RRILTALNTGASSLSFVGSGFIVLCYCLFKELR---KFSFKLVFFLALSDMLCSFFSIV---------GD--PSKGFFCS   80 (314)
Q Consensus        15 ~~~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr---~~~~~~i~~La~adll~~~~~~~---------~~--~~~~~~C~   80 (314)
                      ...+.+++.+++++|++||+++++++.+.|++|   +..|.+++|||++|++.++..++         ..  ..++..|+
T Consensus        32 ~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~C~  111 (510)
T 4grv_A           32 KVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCR  111 (510)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHHHH
Confidence            445677788899999999999999998877665   46688999999999998766432         11  23678999


Q ss_pred             hhHHHHHHHhHhHHHHHHHHHHHHHHHHhhcCCc----hhhhhhhhhhHhhHHHHHHHHHHHhcCC---CC-C----CCC
Q 021325           81 AQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTD----VEDLEAMFHLYVWGTSLVVTVVRSFGND---HR-H----LGV  148 (314)
Q Consensus        81 ~~~~~~~~~~~~s~~~l~~ia~~~y~~i~~~~~~----~~~~~~~~~~~~W~~~~~~~~~~~~~~~---~~-~----~~~  148 (314)
                      +.+++...+..+|.+.+++||+|||++|++|...    .++.....++++|++++++++|++.+.+   .. +    ...
T Consensus       112 ~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~  191 (510)
T 4grv_A          112 GYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGTHPGGL  191 (510)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEECSSSSCCGGGE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHhhcccccccCCCCCCcc
Confidence            9999999999999999999999999999877432    3456678899999999999999887543   11 1    113


Q ss_pred             ceeeecCCCC-chH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021325          149 WCWTQTGRTG-KAV----HFITFYAPLWGAILYNGFTYFQVIRMLNN  190 (314)
Q Consensus       149 ~C~~~~~~~~-~~~----~~~~~~~p~~~~~~~~~~~y~~i~~~~~~  190 (314)
                      .|....+... ..+    .+..|++|+++++    ++|..|.+++++
T Consensus       192 ~c~~~~~~~~~~~~~~~~~~~~f~iP~~ii~----~~Y~~I~~~l~~  234 (510)
T 4grv_A          192 VCTPIVDTATVKVVIQVNTFMSFLFPMLVIS----ILNTVIANKLTV  234 (510)
T ss_dssp             EEEECSCHHHHHHHHHHHHHHHTHHHHHHHH----HHHHHHHHHHHT
T ss_pred             ccccccccchhhhhhhhhhhHHHhhhHHHHH----HHHHHHHHHHHH
Confidence            4543333211 111    2334555655544    677777776653
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A* Back     alignment and structure
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A* Back     alignment and structure
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A* Back     alignment and structure
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A* Back     alignment and structure
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A* Back     alignment and structure
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens} Back     alignment and structure
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A Back     alignment and structure
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens} Back     alignment and structure
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens} Back     alignment and structure
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A* Back     alignment and structure
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ... Back     alignment and structure
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A Back     alignment and structure
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens} Back     alignment and structure
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A* Back     alignment and structure
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A* Back     alignment and structure
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B* Back     alignment and structure
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens} Back     alignment and structure
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic} Back     alignment and structure
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A Back     alignment and structure
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query314
d1u19a_348 Rhodopsin {Cow (Bos taurus) [TaxId: 9913]} 99.96
>d1u19a_ f.13.1.2 (A:) Rhodopsin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Family A G protein-coupled receptor-like
superfamily: Family A G protein-coupled receptor-like
family: Rhodopsin-like
domain: Rhodopsin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.96  E-value=8.5e-28  Score=211.49  Aligned_cols=265  Identities=12%  Similarity=0.049  Sum_probs=187.2

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHhh-------c--CCCCCccchhhHH
Q 021325           14 DRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIV-------G--DPSKGFFCSAQGY   84 (314)
Q Consensus        14 ~~~~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~~~i~~La~adll~~~~~~~-------~--~~~~~~~C~~~~~   84 (314)
                      +...+..++.+++++|++||+++++++...|++|++.+.++.|||++|++.++..++       .  ...++..|...++
T Consensus        36 ~~~~~~~~~~ii~v~gi~gN~lvi~vi~~~k~lr~~~~~~l~nLaiaDll~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~  115 (348)
T d1u19a_          36 QFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGF  115 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHeehhhhccCCCCCHhHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccCchhhhhhhh
Confidence            355667778888999999999999999999999999999999999999998766432       1  2236789999999


Q ss_pred             HHHHHhHhHHHHHHHHHHHHHHHHhhcCCc---hhhhhhhhhhHhhHHHHHHHHHHHhcCCCC---CCCCceeeecCCCC
Q 021325           85 STHFFCVASFLWTTTIAFTLHRTVVQHKTD---VEDLEAMFHLYVWGTSLVVTVVRSFGNDHR---HLGVWCWTQTGRTG  158 (314)
Q Consensus        85 ~~~~~~~~s~~~l~~ia~~~y~~i~~~~~~---~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~---~~~~~C~~~~~~~~  158 (314)
                      ...++..++.+.+.++++|||.++.+|..+   .++........+|..++++..++..+....   .....|........
T Consensus       116 ~~~~~~~~s~~~l~~is~~R~~~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (348)
T d1u19a_         116 FATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPH  195 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEETTTTEEECCCSCCC
T ss_pred             ccccceeeecchhhhhhcccceeeeccccccccccccccccceeeehhhhheecccccccceeccCCccccccccccccc
Confidence            999999999999999999999999876442   234455777788988888888887664322   22233433322211


Q ss_pred             -----chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCchHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 021325          159 -----KAVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKALNRWGYYPLILIGSWAFGTINRIH  233 (314)
Q Consensus       159 -----~~~~~~~~~~p~~~~~~~~~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~i~W~p~~i~~~~  233 (314)
                           ..+.+..+.+...++.++..++|..+.+++++..+..+. .+++.++++|..+.+..+.++|++||+|+.+..+.
T Consensus       196 ~~~~~~~~~~~~~~~~~~ip~~i~~~~y~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~~~~  274 (348)
T d1u19a_         196 EETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQE-SATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFY  274 (348)
T ss_dssp             GGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSSCS-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccch-hhhhHHHHhhHhheEEEeehHHHHHhhHHHhhhhe
Confidence                 122223333333444555557777777766665443332 22334445677777777899999999999888776


Q ss_pred             HhhcCCC-chHHHHHHHHHhhhhhhHHHHHhhccchhHHHHHHHHHhhhh
Q 021325          234 DFIEPGH-KIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERLDLFW  282 (314)
Q Consensus       234 ~~~~~~~-~~~~~~~l~~~l~~~~g~~n~iiy~~~~~~~~~~r~~~~~~~  282 (314)
                      ....++. .......+...+..+++++||++|++.+   +++|+.+++.+
T Consensus       275 ~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiIY~~~~---~~fR~~~~~~l  321 (348)
T d1u19a_         275 IFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMN---KQFRNCMVTTL  321 (348)
T ss_dssp             HHHTTTSCCCHHHHHHHHHHGGGGGTHHHHHHHHTC---HHHHHHHHHHH
T ss_pred             eeccCCccccHHHHHHHHHHHHHHHHHHHHHHHhcC---HHHHHHHHHHh
Confidence            6654432 3445666777789999999999999987   55555555443