Citrus Sinensis ID: 021331

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310----
Protein Sequence
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADFSTDDMILGKKLVLQA
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHcccEEEEEEcccccccccccccccHHHHHccccEEEEEcccccHHHHHHHHHcccccEEEEccccccccHHHHHHHcccccEEEEEcccccccccccccccccccccHHHHHHHHHHHcccEEEEEccccccccccccHHHHHHHHHHccccccccccccccEEEEEHHHHHHHHHHHHccccccccEEEEEccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHccccEEEEEccccccccccccHHHHHcHcccccEEEEEEccccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHccccEEEEEEccccccccccccccHcHcccHHHHHHHHHHccccEEEEEccccccccccccHHHHHHHHHHcccccccccccHcHHHHHEHHHHHHHHHHHHHccccccEEEEccccccHHHHHHHHHHHHHHccccccccccccHHHHHcccccccccccEEEEcHHHHHHHHcccccccHHHHHHHHHHHHHcccHHHHHccccccHHHHHccccccc
Coil and Loop (DISEMBL)
MGGTRFIGVFLSRLLvkeghqvtlftrgkapiaqqlpgesdqEFAEFSSKILhlkgdrkdydfvksslsakgfdvvydingreadevepildalpnleqFIYCssagvylksdllphcesrhkgklntESVLEskgvnwtslrpvyiygplnynpvEEWFFHRlkagrpipipgsgiqvtqlgHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAkaagfpepelvhynpkefdfgkkkafpfrdqhFFASVEKAkhvlgwkpefdLVEGLAdsynldfgrgtyrkeadfstddmilgkKLVLQA
Flexible Loop (DISEMBL)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILhlkgdrkdYDFVKsslsakgfdvVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRhkgklntesvleskgvnwtslrpVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGnekasrqvfniSGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRkeadfstddmilgkklvlqa
Low Complexity Region (SEG)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADFSTDDMILGKKLVLQA
Disordered region (IsUnstruct)
****RFIGVFLSRLLVKEGHQVTLFTRGKAPI**************FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADFSTDDMILGK******
Disordered Region (DISOPRED)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADFSTDDMILGKKLVL**
Disordered Region (DISEMBL)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ*********AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADFSTDDMILGKKLVLQA
Disordered Region (DISPRO)
**GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADFSTDDMILGKKL****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADFSTDDMILGKKLVLQA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	314	2.2.26 [Sep-21-2011]
Q9SA52	378	Chloroplast stem-loop bin	yes	no	0.996	0.828	0.878	1e-170
Q9LYA9	406	Chloroplast stem-loop bin	no	no	0.949	0.733	0.361	1e-47
Q45291	329	UDP-glucose 4-epimerase O	no	no	0.783	0.747	0.256	7e-07
O06485	322	Putative sugar dehydratas	yes	no	0.831	0.810	0.212	0.0003
Q9LPG6	667	Probable rhamnose biosynt	no	no	0.550	0.259	0.25	0.0009

>sp|Q9SA52|CP41B_ARATH Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana GN=CSP41B PE=1 SV=1

 Score =  596 bits (1536), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 281/320 (87%), Positives = 305/320 (95%), Gaps = 7/320 (2%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE- 119
           YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178

Query: 120 ------SRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 173
                 SRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query: 174 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 233
            SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAKA GFPEPE
Sbjct: 239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPE 298

Query: 234 LVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTY 293
           +VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGL DSYNLDFGRGT+
Sbjct: 299 IVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTF 358

Query: 294 RKEADFSTDDMILGKKLVLQ 313
           RKEADF+TDDMIL KKLVLQ
Sbjct: 359 RKEADFTTDDMILSKKLVLQ 378

Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system. Involved in the regulation of heteroglycans and monosaccharide mobilization.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LYA9|CP41A_ARATH Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana GN=CSP41A PE=1 SV=1

 Score =  190 bits (483), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/315 (36%), Positives = 167/315 (53%), Gaps = 17/315 (5%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG   IG + ++ L+  GH VT+ T G    ++++       F+E  S      G +  +
Sbjct: 90  GGHAVIGFYFAKELLSAGHAVTILTVGDES-SEKMKKPPFNRFSEIVSG-----GGKTVW 143

Query: 62  DF---VKSSLSAKGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLP 116
                V + +  + FDVV D NG++ D V P++D   +  ++QF++ SSAG+Y  ++  P
Sbjct: 144 GNPANVANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPP 203

Query: 117 HCES----RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 172
           H E        G +  E  L     NW S RP Y+ G  N    EEWFF R+   R +PI
Sbjct: 204 HVEGDAVKADAGHVVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVPI 263

Query: 173 PGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKAAGFPE 231
           PGSG+Q+T + HV+DL+      + N E AS  +FN   ++ VT DG+A+ CA AAG   
Sbjct: 264 PGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAG-KT 322

Query: 232 PELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRG 291
            E+VHY+PK      KKAF FR+ HF+A    AK +LGW+ + +L E L + +      G
Sbjct: 323 VEIVHYDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLLGWESKTNLPEDLKERFEEYVKIG 382

Query: 292 TYRKEADFSTDDMIL 306
             +KE  F  DD IL
Sbjct: 383 RDKKEIKFELDDKIL 397

Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system.

Arabidopsis thaliana (taxid: 3702)

>sp|Q45291|GALE_CORGL UDP-glucose 4-epimerase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=galE PE=3 SV=2

 Score = 55.1 bits (131), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 125/320 (39%), Gaps = 74/320 (23%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  ++G   + +L++ GH VT+         + +P ++             ++GD  D 
Sbjct: 7   GGAGYVGSVAAAVLLEHGHDVTIIDNFSTGNREAVPADARL-----------IEGDVND- 54

Query: 62  DFVKSSLSAKGFDVVYDINGRE--ADEVE--------------PILDAL--PNLEQFIYC 103
             V+  LS  GF+ V     R    + VE               +LDA+    +   ++ 
Sbjct: 55  -VVEEVLSEGGFEGVVHFAARSLVGESVEKPNEYWHDNVVTALTLLDAMRAHGVNNLVFS 113

Query: 104 SSAGVYLKSDLLPHCE--------SRHKGKLNTESVLESK----GVNWTSLRPVYI---Y 148
           S+A  Y + D++P  E        +    KL+ +  + S     G+  TSLR   +   Y
Sbjct: 114 STAATYGEPDVVPITEDMPTQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYFNVAGAY 173

Query: 149 GPLNYN-PVEEWFF---------HRLKA---GRPIPIPGSGIQVTQLGHVKDLARAFVQV 195
           G +  N  VE             HR K    G   P P  G  V    H+ DLA+A V  
Sbjct: 174 GNIGENREVETHLIPLVLQVATGHREKTFMFGDDWPTP-DGTAVRDYIHILDLAKAHVLA 232

Query: 196 L-GNEKASRQVFNI-SGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFR 253
           L  NE    ++FN+ SG+ Y +   +   C +  G P P  V          ++   P  
Sbjct: 233 LESNEAGKHRIFNLGSGDGY-SVKQVVEMCREVTGHPIPAEV--------APRRAGDPAT 283

Query: 254 DQHFFASVEKAKHVLGWKPE 273
                AS EKAK  LGW PE
Sbjct: 284 ---LIASSEKAKQELGWTPE 300

Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) (taxid: 196627)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|O06485|YFNG_BACSU Putative sugar dehydratase/epimerase YfnG OS=Bacillus subtilis (strain 168) GN=yfnG PE=3 SV=2

 Score = 46.2 bits (108), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/315 (21%), Positives = 122/315 (38%), Gaps = 54/315 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T  +G +L + L+++G  VT   R   P +    GE  +       K+  ++G  +D 
Sbjct: 13  GCTGLLGSYLVKELIEQGANVTGLVRDHVPQSNLYQGEHIK-------KMNIVRGSLEDL 65

Query: 62  DFVKSSLSAKGFDVVYDINGR--------------EADEVEP--ILDAL---PNLEQFIY 102
             ++ +L     D V+ +  +              EA+ +    IL+A    P +++ I 
Sbjct: 66  AVIERALGEYEIDTVFHLAAQAIVGVANRNPISTFEANILGTWNILEACRKHPLIKRVIV 125

Query: 103 CSSAGVYLKSDLLPHCE------------SRHKGKLNTESVLESKGVNWTSLRPVYIYG- 149
            SS   Y   + LP+ E            S+    L + +   + G+     R   +YG 
Sbjct: 126 ASSDKAYGDQENLPYDENMPLQGKHPYDVSKSCADLISHTYFHTYGLPVCITRCGNLYGG 185

Query: 150 -PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV---QVLGNEKASRQV 205
             LN+N +       +  G    I   G  V    +++D  +A++   + +     + + 
Sbjct: 186 GDLNFNRIIPQTIQLVLNGEAPEIRSDGTFVRDYFYIEDAVQAYLLLAEKMEENNLAGEA 245

Query: 206 FNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAK 265
           FN S E  +T   L     K          +  PK  + G  +      +H + S EKA+
Sbjct: 246 FNFSNEIQLTVLELVEKILKKMN------SNLKPKVLNQGSNEI-----KHQYLSAEKAR 294

Query: 266 HVLGWKPEFDLVEGL 280
            +L W P + + EGL
Sbjct: 295 KLLNWTPAYTIDEGL 309

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|Q9LPG6|RHM2_ARATH Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana GN=RHM2 PE=1 SV=1

 Score = 44.7 bits (104), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 27/200 (13%)

Query: 97  LEQFIYCSSAGVYLKSD------------LLP---HCESRHKGKLNTESVLESKGVNWTS 141
           + +FI+ S+  VY ++D            LLP   +  ++   ++   +   S G+   +
Sbjct: 126 IRRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 185

Query: 142 LRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK 200
            R   +YGP  +   +   F     +G+P+PI G G  V    + +D+A AF  VL   +
Sbjct: 186 TRGNNVYGPNQFPEKMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE 245

Query: 201 ASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFAS 260
               V+N+  ++      +AR   K  G  +PE          F + +  PF DQ +F  
Sbjct: 246 IG-HVYNVGTKRERRVIDVARDICKLFG-KDPE------SSIQFVENR--PFNDQRYFLD 295

Query: 261 VEKAKHVLGWKPEFDLVEGL 280
            +K K  LGW+   +  +GL
Sbjct: 296 DQKLKK-LGWQERTNWEDGL 314

Involved in the synthesis of pectinaceous rhamnogalacturonan I, the major component of Arabidopsis mucilage. Required for the normal seed coat epidermal development.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	314
255542956	381	NAD dependent epimerase/dehydratase, put	1.0	0.824	0.897	1e-170
312282041	379	unnamed protein product [Thellungiella h	1.0	0.828	0.881	1e-169
118489564	380	unknown [Populus trichocarpa x Populus d	1.0	0.826	0.884	1e-168
15217485	378	RNA binding protein [Arabidopsis thalian	0.996	0.828	0.878	1e-168
3850621	374	putative RNA binding protein [Arabidopsi	0.996	0.836	0.878	1e-167
21593201	378	putative RNA-binding protein [Arabidopsi	0.996	0.828	0.878	1e-167
17064988	378	g5bf protein [Arabidopsis thaliana]	0.996	0.828	0.875	1e-167
224124986	380	predicted protein [Populus trichocarpa]	1.0	0.826	0.881	1e-167
118487652	380	unknown [Populus trichocarpa]	1.0	0.826	0.881	1e-167
297843724	378	catalytic/ coenzyme binding protein [Ara	0.996	0.828	0.875	1e-167

>gi|255542956|ref|XP_002512541.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis] gi|223548502|gb|EEF49993.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 288/321 (89%), Positives = 306/321 (95%), Gaps = 7/321 (2%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI Q+LPGESDQ++A+FSSK+LHLKGDRKD
Sbjct: 61  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQKLPGESDQDYADFSSKVLHLKGDRKD 120

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE- 119
           +DFVKSSLSAKGFDVVYDINGREADEV PILDALPNLEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 121 FDFVKSSLSAKGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKSDLLPHSEK 180

Query: 120 ------SRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 173
                 SRHKGKL TES+LES GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 181 DAVDPKSRHKGKLETESLLESSGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 240

Query: 174 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 233
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLARACAKA GFPEPE
Sbjct: 241 NSGIQITQLGHVKDLAKAFIQVLGNEKASKQVFNISGEKYVTFDGLARACAKAGGFPEPE 300

Query: 234 LVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTY 293
           +VHYNPKEFDFGKKKAFPFRDQHFFASV+KAKHVLGW+PEFDLVEGLADSYNLDFGRGT+
Sbjct: 301 IVHYNPKEFDFGKKKAFPFRDQHFFASVDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTF 360

Query: 294 RKEADFSTDDMILGKKLVLQA 314
           RKEADF+TDDMILGK LVLQ+
Sbjct: 361 RKEADFTTDDMILGKSLVLQS 381

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312282041|dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]

 Score =  600 bits (1548), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 283/321 (88%), Positives = 306/321 (95%), Gaps = 7/321 (2%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE- 119
           YDFVKSSLSA+GFDVVYDINGREA+EVEPI+DALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEV 178

Query: 120 ------SRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 173
                 SRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query: 174 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 233
            SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKY+TFDGLARACAKA GFPEPE
Sbjct: 239 NSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYITFDGLARACAKAGGFPEPE 298

Query: 234 LVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTY 293
           +VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGL DSYNLDFGRGT+
Sbjct: 299 IVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTF 358

Query: 294 RKEADFSTDDMILGKKLVLQA 314
           RKEADF+TDDMIL KKLVLQ+
Sbjct: 359 RKEADFTTDDMILSKKLVLQS 379

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489564|gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  596 bits (1537), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 284/321 (88%), Positives = 306/321 (95%), Gaps = 7/321 (2%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI QQLPGESDQ++++FSSKILHLKGDRKD
Sbjct: 60  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQDYSDFSSKILHLKGDRKD 119

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE- 119
           ++FVK+SL+AKGFDVVYDINGREA EVEPILDALP LEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 120 FEFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEK 179

Query: 120 ------SRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 173
                 SRHKGKL TES+LES+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 180 DAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 239

Query: 174 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 233
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLA+ACAKAAGFPEPE
Sbjct: 240 NSGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPE 299

Query: 234 LVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTY 293
           +VHYNPK+FDFGKKKAFPFRDQHFFAS++KAKHVLGW+PEFDLVEGLADSYNLDFGRGTY
Sbjct: 300 IVHYNPKDFDFGKKKAFPFRDQHFFASIDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTY 359

Query: 294 RKEADFSTDDMILGKKLVLQA 314
           RKEADF TDD+ILGK LVLQA
Sbjct: 360 RKEADFFTDDLILGKSLVLQA 380

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15217485|ref|NP_172405.1| RNA binding protein [Arabidopsis thaliana] gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName: Full=Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic; Short=CSP41-b; AltName: Full=Heteroglycan-interacting protein 1.3; AltName: Full=Protein CHLOROPLAST RNA BINDING; AltName: Full=Protein Gb5f; Flags: Precursor gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340 [Arabidopsis thaliana] gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6 [Arabidopsis thaliana] gi|4337177|gb|AAD18098.1| Identical to gb|Y10557 g5bf gene from Arabidopsis thaliana. ESTs gb|R30578, gb|R90475, gb|T22384, gb|T22425, gb|N64934 and gb|T46767 come from this gene [Arabidopsis thaliana] gi|14334754|gb|AAK59555.1| putative RNA-binding protein [Arabidopsis thaliana] gi|17979099|gb|AAL47493.1| putative RNA-binding protein [Arabidopsis thaliana] gi|332190310|gb|AEE28431.1| RNA binding protein [Arabidopsis thaliana]

 Score =  596 bits (1536), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 281/320 (87%), Positives = 305/320 (95%), Gaps = 7/320 (2%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE- 119
           YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178

Query: 120 ------SRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 173
                 SRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query: 174 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 233
            SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAKA GFPEPE
Sbjct: 239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPE 298

Query: 234 LVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTY 293
           +VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGL DSYNLDFGRGT+
Sbjct: 299 IVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTF 358

Query: 294 RKEADFSTDDMILGKKLVLQ 313
           RKEADF+TDDMIL KKLVLQ
Sbjct: 359 RKEADFTTDDMILSKKLVLQ 378

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3850621|emb|CAA75602.1| putative RNA binding protein [Arabidopsis thaliana]

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 281/320 (87%), Positives = 305/320 (95%), Gaps = 7/320 (2%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 55  MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 114

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE- 119
           YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 115 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 174

Query: 120 ------SRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 173
                 SRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 175 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 234

Query: 174 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 233
            SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAKA GFPEPE
Sbjct: 235 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPE 294

Query: 234 LVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTY 293
           +VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGL DSYNLDFGRGT+
Sbjct: 295 IVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTF 354

Query: 294 RKEADFSTDDMILGKKLVLQ 313
           RKEADF+TDDMIL KKLVLQ
Sbjct: 355 RKEADFTTDDMILSKKLVLQ 374

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21593201|gb|AAM65150.1| putative RNA-binding protein [Arabidopsis thaliana]

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 281/320 (87%), Positives = 304/320 (95%), Gaps = 7/320 (2%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE- 119
           YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178

Query: 120 ------SRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 173
                 SRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query: 174 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 233
            SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA ACAKA GFPEPE
Sbjct: 239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAXACAKAGGFPEPE 298

Query: 234 LVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTY 293
           +VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGL DSYNLDFGRGT+
Sbjct: 299 IVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTF 358

Query: 294 RKEADFSTDDMILGKKLVLQ 313
           RKEADF+TDDMIL KKLVLQ
Sbjct: 359 RKEADFTTDDMILSKKLVLQ 378

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|17064988|gb|AAL32648.1| g5bf protein [Arabidopsis thaliana]

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 280/320 (87%), Positives = 305/320 (95%), Gaps = 7/320 (2%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE- 119
           YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178

Query: 120 ------SRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 173
                 SRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVE+WFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEKWFFHRLKAGRPIPVP 238

Query: 174 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 233
            SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAKA GFPEPE
Sbjct: 239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPE 298

Query: 234 LVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTY 293
           +VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGL DSYNLDFGRGT+
Sbjct: 299 IVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTF 358

Query: 294 RKEADFSTDDMILGKKLVLQ 313
           RKEADF+TDDMIL KKLVLQ
Sbjct: 359 RKEADFTTDDMILSKKLVLQ 378

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124986|ref|XP_002319474.1| predicted protein [Populus trichocarpa] gi|222857850|gb|EEE95397.1| predicted protein [Populus trichocarpa]

 Score =  593 bits (1530), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 283/321 (88%), Positives = 305/321 (95%), Gaps = 7/321 (2%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI Q LPGESDQ++A+FSSKILHLKGDRKD
Sbjct: 60  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQPLPGESDQDYADFSSKILHLKGDRKD 119

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE- 119
           ++FVK+SL+AKGFDVVYDINGREA EVEPILDALP LEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 120 FEFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEK 179

Query: 120 ------SRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 173
                 SRHKGKL TES+LES+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 180 DAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 239

Query: 174 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 233
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLA+ACAKAAGFPEPE
Sbjct: 240 NSGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPE 299

Query: 234 LVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTY 293
           +VHYNPK+FDFGKKKAFPFRDQHFFAS++KAKHVLGW+PEFDLVEGLADSYNLDFGRGTY
Sbjct: 300 IVHYNPKDFDFGKKKAFPFRDQHFFASIDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTY 359

Query: 294 RKEADFSTDDMILGKKLVLQA 314
           RKEADF TDD+I+GK LVLQA
Sbjct: 360 RKEADFFTDDLIIGKSLVLQA 380

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118487652|gb|ABK95651.1| unknown [Populus trichocarpa]

 Score =  593 bits (1529), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 283/321 (88%), Positives = 305/321 (95%), Gaps = 7/321 (2%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI Q LPGESDQ++A+FSSKILHLKGDRKD
Sbjct: 60  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQPLPGESDQDYADFSSKILHLKGDRKD 119

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE- 119
           ++FVK+SL+AKGFDVVYDINGREA EVEPILDALP LEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 120 FEFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEK 179

Query: 120 ------SRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 173
                 SRHKGKL TES+LES+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 180 DAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 239

Query: 174 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 233
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLA+ACAKAAGFPEPE
Sbjct: 240 NSGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPE 299

Query: 234 LVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTY 293
           +VHYNPK+FDFGKKKAFPFRDQHFFAS++KAKHVLGW+PEFDLVEGLADSYNLDFGRGTY
Sbjct: 300 IVHYNPKDFDFGKKKAFPFRDQHFFASIDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTY 359

Query: 294 RKEADFSTDDMILGKKLVLQA 314
           RKEADF TDD+I+GK LVLQA
Sbjct: 360 RKEADFFTDDLIIGKSLVLQA 380

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297843724|ref|XP_002889743.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata] gi|297335585|gb|EFH66002.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata]

 Score =  593 bits (1528), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 280/320 (87%), Positives = 303/320 (94%), Gaps = 7/320 (2%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVK GHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRLLVKGGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE- 119
           YDFVKSSLSA+GFDVVYDINGREA+EVEPI+DALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEE 178

Query: 120 ------SRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 173
                 SRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query: 174 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 233
            SGIQ++QLGHVKDL  AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAKA GFPEPE
Sbjct: 239 NSGIQISQLGHVKDLGTAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPE 298

Query: 234 LVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTY 293
           +VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGL DSYNLDFGRGT+
Sbjct: 299 IVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTF 358

Query: 294 RKEADFSTDDMILGKKLVLQ 313
           RKEADF+TDDM+L KKLVLQ
Sbjct: 359 RKEADFTTDDMVLSKKLVLQ 378

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	314
TAIR|locus:2203028	378	CRB "chloroplast RNA binding"	0.996	0.828	0.878	1.7e-155
TAIR|locus:2099222	406	CSP41A "AT3G63140" [Arabidopsi	0.955	0.738	0.364	8.8e-47
TIGR_CMR|GSU_2366	358	GSU_2366 "dTDP-glucose 4,6-deh	0.512	0.449	0.265	7.2e-06
UNIPROTKB|Q6MWV3	314	galE1 "UDP-glucose 4-epimerase	0.828	0.828	0.248	2.6e-05
TAIR|locus:2025192	310	AT1G75280 [Arabidopsis thalian	0.423	0.429	0.273	9.4e-05
TAIR|locus:2025197	318	AT1G75290 [Arabidopsis thalian	0.547	0.540	0.276	0.00013
UNIPROTKB|F1P029	365	TGDS "Uncharacterized protein"	0.563	0.484	0.27	0.00028
UNIPROTKB|Q81JK7	292	BA_5697 "Uncharacterized prote	0.305	0.328	0.318	0.00031
TIGR_CMR|BA_5697	292	BA_5697 "conserved hypothetica	0.305	0.328	0.318	0.00031
UNIPROTKB|B3KV61	363	UXS1 "UDP-glucuronate decarbox	0.503	0.435	0.25	0.0005

TAIR|locus:2203028 CRB "chloroplast RNA binding" [Arabidopsis thaliana (taxid:3702)]

 Score = 1516 (538.7 bits), Expect = 1.7e-155, P = 1.7e-155
 Identities = 281/320 (87%), Positives = 305/320 (95%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct:    59 MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE- 119
             YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct:   119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178

Query:   120 ------SRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 173
                   SRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct:   179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query:   174 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 233
              SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAKA GFPEPE
Sbjct:   239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPE 298

Query:   234 LVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTY 293
             +VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGL DSYNLDFGRGT+
Sbjct:   299 IVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTF 358

Query:   294 RKEADFSTDDMILGKKLVLQ 313
             RKEADF+TDDMIL KKLVLQ
Sbjct:   359 RKEADFTTDDMILSKKLVLQ 378

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0003723 "RNA binding" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0042631 "cellular response to water deprivation" evidence=IEP

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0042742 "defense response to bacterium" evidence=IEP;RCA

GO:0016020 "membrane" evidence=IDA

GO:0007623 "circadian rhythm" evidence=IEP;IMP

GO:0009658 "chloroplast organization" evidence=IMP

GO:0005777 "peroxisome" evidence=IDA

GO:0005840 "ribosome" evidence=IDA

GO:0006364 "rRNA processing" evidence=IGI;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0032544 "plastid translation" evidence=IMP

GO:0045727 "positive regulation of translation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IMP

GO:0005996 "monosaccharide metabolic process" evidence=IMP

GO:0010297 "heteropolysaccharide binding" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0034660 "ncRNA metabolic process" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042793 "transcription from plastid promoter" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2099222 CSP41A "AT3G63140" [Arabidopsis thaliana (taxid:3702)]

 Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
 Identities = 114/313 (36%), Positives = 168/313 (53%)

Query:     2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKD 60
             GG   IG + ++ L+  GH VT+ T G    ++++       F+E  S     + G+  +
Sbjct:    90 GGHAVIGFYFAKELLSAGHAVTILTVGDES-SEKMKKPPFNRFSEIVSGGGKTVWGNPAN 148

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
                V + +  + FDVV D NG++ D V P++D   +  ++QF++ SSAG+Y  ++  PH 
Sbjct:   149 ---VANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHV 205

Query:   119 ES----RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 174
             E        G +  E  L     NW S RP Y+ G  N    EEWFF R+   R +PIPG
Sbjct:   206 EGDAVKADAGHVVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVPIPG 265

Query:   175 SGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 233
             SG+Q+T + HV+DL+      + N E AS  +FN   ++ VT DG+A+ CA AAG    E
Sbjct:   266 SGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAG-KTVE 324

Query:   234 LVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTY 293
             +VHY+PK      KKAF FR+ HF+A    AK +LGW+ + +L E L + +      G  
Sbjct:   325 IVHYDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLLGWESKTNLPEDLKERFEEYVKIGRD 384

Query:   294 RKEADFSTDDMIL 306
             +KE  F  DD IL
Sbjct:   385 KKEIKFELDDKIL 397

GO:0003729 "mRNA binding" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0008266 "poly(U) RNA binding" evidence=IDA

GO:0006364 "rRNA processing" evidence=IGI;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0032544 "plastid translation" evidence=IMP

GO:0045727 "positive regulation of translation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IMP

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0015979 "photosynthesis" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

TIGR_CMR|GSU_2366 GSU_2366 "dTDP-glucose 4,6-dehydratase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 130 (50.8 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
 Identities = 46/173 (26%), Positives = 74/173 (42%)

Query:   116 PHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPG 174
             P+  S+    L   +  E+ G+   + R    YGP  +   +     H + AG+P+P+ G
Sbjct:   162 PYSASKAGSDLLVRAYNETFGLPVLTTRCSNNYGPFQFPEKLIPLMIHNIVAGKPLPVYG 221

Query:   175 SGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARACA---KAAGFP 230
              G  V    HVKD + A   VL   K   +VFN+ G  ++   D +   C    +  G P
Sbjct:   222 DGRNVRDWLHVKDHSTAIETVLKGGKPG-EVFNVGGNNEWFNIDIVHLLCDLLDERLGRP 280

Query:   231 EPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADS 283
               E    +     F K +     D+ +  S  K K  LGW+P +    G+A++
Sbjct:   281 GGE----SRGLITFVKDRLG--HDRRYAISAAKIKRELGWEPSYTFERGIAET 327

GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS

GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS

GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS

UNIPROTKB|Q6MWV3 galE1 "UDP-glucose 4-epimerase" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 125 (49.1 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 78/314 (24%), Positives = 128/314 (40%)

Query:     2 GGTRFIGVFLSRLLVKEGHQVT-L--FTRGKAPIAQQLPGESDQEF--AEFSSKILH--L 54
             G   FIG  L   L+ +GH V  L  F  G+A   + L   S   F  A+  +  LH  L
Sbjct:     7 GAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLADNSAHVFVEADIVTADLHAIL 66

Query:    55 KGDRKDYDF-------VKSSLSAKGFDVVYDING--READEVEPILDALPNLEQFIYCSS 105
             +  R +  F       V+ S++   FD   ++ G  R A+           + + ++ SS
Sbjct:    67 EQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQT-----GVRKIVHTSS 121

Query:   106 AG-VY-----------LKSD-LLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLN 152
              G +Y             +D   P+   +  G++   +     G++ + + P  +YGP  
Sbjct:   122 GGSIYGTPPEYPTPETAPTDPASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPANVYGP-R 180

Query:   153 YNP-----VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN 207
              +P     V   F   L +G+P  + G G        V D+  AFV+V  +     + FN
Sbjct:   181 QDPHGEAGVVAIFAQALLSGKPTRVFGDGTNTRDYVFVDDVVDAFVRVSADVGGGLR-FN 239

Query:   208 ISGEKYVTFDGLARACAKAAGFPE-PELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKH 266
             I   K  +   L  A A A G P+ PE   + P+  D  K+             +  A+ 
Sbjct:   240 IGTGKETSDRQLHSAVAAAVGGPDDPEF--HPPRLGDL-KRSCL---------DIGLAER 287

Query:   267 VLGWKPEFDLVEGL 280
             VLGW+P+ +L +G+
Sbjct:   288 VLGWRPQIELADGV 301

GO:0005886 "plasma membrane" evidence=IDA

GO:0040007 "growth" evidence=IMP

TAIR|locus:2025192 AT1G75280 [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 9.4e-05, P = 9.4e-05
 Identities = 40/146 (27%), Positives = 74/146 (50%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             +GGT +IG FL     K GH      R +A ++  + G++ Q F +    ILH  GD  D
Sbjct:    11 IGGTGYIGKFLVEASAKAGHSTFALVR-EATLSDPVKGKTVQSFKDLGVTILH--GDLND 67

Query:    61 YDFVKSSLSAKGFDVVYDING--READEVEPILDALP---NLEQFIYCSSAGVYL-KSDL 114
             ++ +  ++  K  DVV    G  +  D+ + I+ A+    N+++F+  S  GV + ++  
Sbjct:    68 HESLVKAI--KQVDVVISTVGSMQILDQTK-IISAIKEAGNVKRFLP-SEFGVDVDRTSA 123

Query:   115 LPHCESRHKGKLNTESVLESKGVNWT 140
             +   +S   GK+     +E++G+ +T
Sbjct:   124 VEPAKSAFAGKIQIRRTIEAEGIPYT 149

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

TAIR|locus:2025197 AT1G75290 [Arabidopsis thaliana (taxid:3702)]

 Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
 Identities = 53/192 (27%), Positives = 91/192 (47%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             +GGT  IG  +    VK GH      R +A ++    G++ Q F +F   +LH  GD  D
Sbjct:    11 IGGTGHIGKLIIEASVKAGHSTLALVR-EASLSDPNKGKTVQNFKDFGVTLLH--GDLND 67

Query:    61 YDFVKSSLSAKGFDVVYDING--READEVEPILDALP---NLEQFIYCSSAGVYL-KSDL 114
             ++ +  ++  K  DVV    G  +  D+ + I+ A+    N+++F+  S  G+ + KS  
Sbjct:    68 HESLVKAI--KQADVVISTVGSMQILDQTK-IISAIKEAGNVKRFLP-SEFGMDVDKSSA 123

Query:   115 LPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 174
             +   +S    KL T   +E++G+ +T L   Y  G   Y P       +L+ G   P P 
Sbjct:   124 VEPAKSAFGRKLQTRRDIEAEGIPYTYLVTNYFAG--YYLPT----LVQLEPGLTSP-PR 176

Query:   175 SGIQVTQLGHVK 186
               +++   G+VK
Sbjct:   177 DKVKIFGDGNVK 188

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016651 "oxidoreductase activity, acting on NAD(P)H" evidence=ISS

UNIPROTKB|F1P029 TGDS "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 117 (46.2 bits), Expect = 0.00028, P = 0.00028
 Identities = 54/200 (27%), Positives = 83/200 (41%)

Query:    96 NLEQFIYCSSAGVYLKS------DLLPHCESRH--KGKLNTESVLESKGVNW----TSLR 143
             N+E+F+Y S+  VY  S      +  P C +      K   E  ++S    +       R
Sbjct:   138 NVEKFVYVSTDEVYGGSTDQEFDESSPKCPTNPYASSKAAAECFVQSYWERYQFPVVITR 197

Query:   144 PVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 202
                +YGP  Y   V   F   L+  R   I GSG+Q     +  D+  AF+ VL   K  
Sbjct:   198 SSNVYGPHQYPEKVIPKFISLLQQNRKCCIHGSGLQRRNFLYATDVVEAFLTVLKEGKPG 257

Query:   203 RQVFNISGEKYVTFDGLARACAKAAG--FPEPELVHYNPKEFDFGKKKAFPFRDQHFFAS 260
              +++NI     ++   LA+           E E+ H+     D+ K +  P  D  +  S
Sbjct:   258 -EIYNIGTNFEMSIVQLAKELIHLIKKTSSESEMEHW----MDYVKDR--PTNDLRYPMS 310

Query:   261 VEKAKHVLGWKPEFDLVEGL 280
              EK  H LGW+P+    EG+
Sbjct:   311 SEKM-HNLGWRPKVPWKEGI 329

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA

GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

UNIPROTKB|Q81JK7 BA_5697 "Uncharacterized protein" [Bacillus anthracis (taxid:1392)]

 Score = 115 (45.5 bits), Expect = 0.00031, P = 0.00031
 Identities = 35/110 (31%), Positives = 52/110 (47%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             +GGTRF G  L   L+K+GH VT+ TRG   I +            F   +  L  DR+D
Sbjct:     9 LGGTRFFGKHLVEALLKDGHDVTIATRG---ITED----------SFGGTVKRLIVDRED 55

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL-EQFIYCSSAGVY 109
                + S L  K +D+VYD     ++  + + + L     ++I  SS  VY
Sbjct:    56 EKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGTTNKYIMTSSMAVY 105

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|BA_5697 BA_5697 "conserved hypothetical protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 115 (45.5 bits), Expect = 0.00031, P = 0.00031
 Identities = 35/110 (31%), Positives = 52/110 (47%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             +GGTRF G  L   L+K+GH VT+ TRG   I +            F   +  L  DR+D
Sbjct:     9 LGGTRFFGKHLVEALLKDGHDVTIATRG---ITED----------SFGGTVKRLIVDRED 55

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL-EQFIYCSSAGVY 109
                + S L  K +D+VYD     ++  + + + L     ++I  SS  VY
Sbjct:    56 EKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGTTNKYIMTSSMAVY 105

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|B3KV61 UXS1 "UDP-glucuronate decarboxylase 1, isoform CRA_a" [Homo sapiens (taxid:9606)]

 Score = 100 (40.3 bits), Expect = 0.00050, Sum P(2) = 0.00049
 Identities = 45/180 (25%), Positives = 75/180 (41%)

Query:   132 LESKGVNWTSLRPVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 188
             ++ +GV     R    +GP   +N   V   F  +   G P+ + GSG Q     +V DL
Sbjct:   189 MKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDL 248

Query:   189 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKK 248
                 V ++ N   S  V N+   +  T    A+      G    E+   +  + D  K+K
Sbjct:   249 VNGLVALM-NSNVSSPV-NLGNPEEHTILEFAQLIKNLVGSGS-EIQFLSEAQDDPQKRK 305

Query:   249 AFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADFSTDDMILGK 308
               P         ++KAK +LGW+P   L EGL  + +       +RKE ++  ++  + K
Sbjct:   306 --P--------DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 349

GO:0000166 "nucleotide binding" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SA52	CP41B_ARATH	No assigned EC number	0.8781	0.9968	0.8280	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	314
PLN00016	378	PLN00016, PLN00016, RNA-binding protein; Provision	0.0
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	9e-92
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	3e-30
cd08946	200	cd08946, SDR_e, extended (e) SDRs	2e-19
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	3e-18
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	4e-18
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	1e-14
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	2e-14
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	3e-14
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	9e-14
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	1e-13
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	1e-13
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	1e-11
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	5e-10
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	2e-09
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	3e-09
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	4e-09
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	5e-09
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	2e-08
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	2e-08
PLN02725	306	PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-	2e-08
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	3e-08
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	8e-08
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	1e-07
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	5e-07
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	5e-07
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	7e-07
TIGR01181	317	TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd	2e-06
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	4e-06
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	4e-05
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	5e-05
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	7e-05
PLN02260	668	PLN02260, PLN02260, probable rhamnose biosynthetic	1e-04
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	1e-04
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	2e-04
COG1088	340	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel	3e-04
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	6e-04
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	0.001
pfam13950	62	pfam13950, Epimerase_Csub, UDP-glucose 4-epimerase	0.001
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	0.001
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	0.002
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	0.004
cd05248	317	cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannohepto	0.004

>gnl|CDD|215029 PLN00016, PLN00016, RNA-binding protein; Provisional

 Score =  542 bits (1399), Expect = 0.0
 Identities = 191/320 (59%), Positives = 223/320 (69%), Gaps = 12/320 (3%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKD 60
           GG  FIG +L++ LVK GH+VTLFTRGK P +Q++  E    F+E SS  +  + GD  D
Sbjct: 63  GGHAFIGFYLAKELVKAGHEVTLFTRGKEP-SQKMKKEPFSRFSELSSAGVKTVWGDPAD 121

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDAL--PNLEQFIYCSSAGVYLKSDLLPHC 118
              VKS ++  GFDVVYD NG++ DEVEP+ D    P L+QF++CSSAGVY KSD  PH 
Sbjct: 122 ---VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHV 178

Query: 119 ES----RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 174
           E        G L  E+ L+  GVNWTS RP YIYGP N    EEWFF RL  GRP+PIPG
Sbjct: 179 EGDAVKPKAGHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPG 238

Query: 175 SGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPEL 234
           SGIQ+TQLGHVKDLA  F  V+GN KA+ Q+FNI  ++ VTFDG+A+ACAKAAGFP  E+
Sbjct: 239 SGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFP-EEI 297

Query: 235 VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYR 294
           VHY+PK   FG KKAFPFRDQHFFAS  KAK  LGW P+FDLVE L D Y L FGRG  R
Sbjct: 298 VHYDPKAVGFGAKKAFPFRDQHFFASPRKAKEELGWTPKFDLVEDLKDRYELYFGRGRDR 357

Query: 295 KEADFSTDDMILGKKLVLQA 314
           KEADF TDD IL K  V  A
Sbjct: 358 KEADFETDDKILEKLGVPVA 377

Length = 378

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score =  273 bits (699), Expect = 9e-92
 Identities = 100/259 (38%), Positives = 129/259 (49%), Gaps = 31/259 (11%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           +GGTRFIG  L   L+  GH VT+F RG+                     + H+ GDR D
Sbjct: 6   IGGTRFIGKALVEELLAAGHDVTVFNRGRTKPD-------------LPEGVEHIVGDRND 52

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDAL-PNLEQFIYCSSAGVYLKS-----DL 114
            D ++  L  + FDVV D       +VE  LDA    ++Q+I+ SSA VYLK      + 
Sbjct: 53  RDALEELLGGEDFDVVVDTIAYTPRQVERALDAFKGRVKQYIFISSASVYLKPGRVITES 112

Query: 115 LPHCE----------SRHKGKLNTESVLESK-GVNWTSLRPVYIYGPLNYNPVEEWFFHR 163
            P  E             +GK   E VL       +T +RP YIYGP +Y     +FF R
Sbjct: 113 TPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFPYTIVRPPYIYGPGDYTGRLAYFFDR 172

Query: 164 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARAC 223
           L  GRPI +PG G  + Q  HVKDLARA +   GN KA   +FNI+G++ VT+D L  AC
Sbjct: 173 LARGRPILVPGDGHSLVQFIHVKDLARALLGAAGNPKAIGGIFNITGDEAVTWDELLEAC 232

Query: 224 AKAAGFPEPELVHYNPKEF 242
           AKA G  E E+VH      
Sbjct: 233 AKALGK-EAEIVHVEEDFL 250

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  116 bits (291), Expect = 3e-30
 Identities = 77/324 (23%), Positives = 108/324 (33%), Gaps = 62/324 (19%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
            GG  FIG  L   L+  GH V    R +  +   L G                  D  D
Sbjct: 6   TGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVV------------LDLTD 53

Query: 61  YDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNL---------------EQFI 101
            D V         D V       +  +++  +P      N+               ++F+
Sbjct: 54  RDLVDELAKGVP-DAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFV 112

Query: 102 YCSSAG-VYLKSDLLPHCESR---------HKGKLNTESVLES----KGVNWTSLRPVYI 147
           + SS   VY     LP  E              KL  E +L +     G+    LRP  +
Sbjct: 113 FASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNV 172

Query: 148 YGPLNYNPVEEWFFHRL-----KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 202
           YGP +   +             K    I I G G Q     +V D+A A +  L  E   
Sbjct: 173 YGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLAL--ENPD 230

Query: 203 RQVFNI-SGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASV 261
             VFNI SG   +T   LA A A+A G               +          +     +
Sbjct: 231 GGVFNIGSGTAEITVRELAEAVAEAVGSK--------APLIVYIPLGRRGDLREGKLLDI 282

Query: 262 EKAKHVLGWKPEFDLVEGLADSYN 285
            KA+  LGW+P+  L EGLAD+  
Sbjct: 283 SKARAALGWEPKVSLEEGLADTLE 306

Length = 314

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 84.3 bits (209), Expect = 2e-19
 Identities = 58/225 (25%), Positives = 83/225 (36%), Gaps = 46/225 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG  L R L++ GH+V +  R                       ++HL       
Sbjct: 5   GGAGFIGSHLVRRLLERGHEVVVIDRLDV--------------------VVHLAALVGV- 43

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE 119
                  S    D  ++ N         +L+A     +++F+Y SSA VY   + LP  E
Sbjct: 44  -----PASWDNPDEDFETN---VVGTLNLLEAARKAGVKRFVYASSASVYGSPEGLPEEE 95

Query: 120 SRH--------KGKLNTESVLES----KGVNWTSLRPVYIYGP---LNYNPVEEWFFHRL 164
                        KL  E +L S     G+    LR   +YGP      + V   F  R 
Sbjct: 96  ETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYGPGQRPRLDGVVNDFIRRA 155

Query: 165 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 209
             G+P+ + G G Q     HV D+ RA +  L N      V+NI 
Sbjct: 156 LEGKPLTVFGGGNQTRDFIHVDDVVRAILHALENPLEGGGVYNIG 200

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 81.9 bits (203), Expect = 3e-18
 Identities = 56/241 (23%), Positives = 93/241 (38%), Gaps = 47/241 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT FIG  L R L++EG++V +  R +   +                 I   +GD  D 
Sbjct: 5   GGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGR------------IRFHEGDLTDP 52

Query: 62  DFVKSSLSAKGFDVVY--------DINGREADE--------VEPILDALP--NLEQFIYC 103
           D ++  L+    D V           +  +  +           +L+A     +++F++ 
Sbjct: 53  DALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFA 112

Query: 104 SSAGVYLKSDLLPHCESRHKGKLN------------TESVLESKGVNWTSLRPVYIYGPL 151
           SS+ VY      P  E    G L+             E+   + G+    LR   +YGP 
Sbjct: 113 SSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFNVYGPG 172

Query: 152 NYNPVEE----WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN 207
           N +P           R+  G+PI + G G Q     +V D+ARA +  L +      ++N
Sbjct: 173 NPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLALEHPDGGE-IYN 231

Query: 208 I 208
           I
Sbjct: 232 I 232

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 82.8 bits (205), Expect = 4e-18
 Identities = 74/326 (22%), Positives = 116/326 (35%), Gaps = 75/326 (23%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG  L   L++EG QV +F R   P    L G       ++       KGD ++ 
Sbjct: 6   GGNGFIGSHLVDALLEEGPQVRVFDRSIPPYELPLGG------VDYI------KGDYENR 53

Query: 62  DFVKSSLSAKG--FDVVYDINGREADEVEPILDALPNL---------------EQFIYCS 104
             ++S+L        +    N   +    PILD   N+                + I+ S
Sbjct: 54  ADLESALVGIDTVIHLASTTNPATS-NKNPILDIQTNVAPTVQLLEACAAAGIGKIIFAS 112

Query: 105 SAG-VYLKSDLLPHCESRHK---------GKLNTESVLE----SKGVNWTSLRPVYIYGP 150
           S G VY   + LP  ES             KL  E  L       G+++T LR    YGP
Sbjct: 113 SGGTVYGVPEQLPISES-DPTLPISSYGISKLAIEKYLRLYQYLYGLDYTVLRISNPYGP 171

Query: 151 LNYN-------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 203
                      P+     +++  G PI I G G  +    ++ DL  A + +L ++    
Sbjct: 172 GQRPDGKQGVIPI---ALNKILRGEPIEIWGDGESIRDYIYIDDLVEALMALLRSKGLEE 228

Query: 204 QVFNI-SGEKYV---TFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFA 259
            VFNI SG  Y        + +   ++           +                     
Sbjct: 229 -VFNIGSGIGYSLAELIAEIEKVTGRSVQVIYTPARTTDV---------------PKIVL 272

Query: 260 SVEKAKHVLGWKPEFDLVEGLADSYN 285
            + +A+  LGW P+  L +GL  ++ 
Sbjct: 273 DISRARAELGWSPKISLEDGLEKTWQ 298

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 71.6 bits (176), Expect = 1e-14
 Identities = 68/255 (26%), Positives = 94/255 (36%), Gaps = 33/255 (12%)

Query: 6   FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK 65
           ++G  L+R L+ +G QVT  TR    +A   P       A+     L   G   D D + 
Sbjct: 8   YLGQRLARQLLAQGWQVTGTTRSPEKLAADRPAGVTPLAAD-----LTQPGLLADVDHLV 62

Query: 66  SSLSAKGFDVVYDINGREADEVEPILDALPNL---EQFIYCSSAGVY--------LKSDL 114
            SL            G     +  +LDAL  L   ++ IY SS GVY         ++  
Sbjct: 63  ISLPPPA----GSYRGGYDPGLRALLDALAQLPAVQRVIYLSSTGVYGDQQGEWVDETSP 118

Query: 115 LPHCESRHKGKLNTESVLESKG-VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 173
                   +  L  E  L + G    T LR   IYGP   +P+      RL  G     P
Sbjct: 119 PNPSTESGRALLEAEQALLALGSKPTTILRLAGIYGP-GRHPLR-----RLAQG--TGRP 170

Query: 174 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 233
            +G   T   HV DL  A    L        V+N+  +  VT     +A A+  G P P 
Sbjct: 171 PAGNAPTNRIHVDDLVGALAFALQRPAPGP-VYNVVDDLPVTRGEFYQAAAELLGLPPPP 229

Query: 234 LVHYNPKEFDFGKKK 248
            +   P  F    K+
Sbjct: 230 FI---PFAFLREGKR 241

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 72.3 bits (178), Expect = 2e-14
 Identities = 83/323 (25%), Positives = 124/323 (38%), Gaps = 73/323 (22%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  L   L++ GH+V +    + GK    + LP        E    +  ++GD 
Sbjct: 6   GGAGFIGSHLVERLLERGHEVIVLDNLSTGKK---ENLP--------EVKPNVKFIEGDI 54

Query: 59  KDYDFVKSSLS--------AKGFDVVYDINGREADEVEPILDALPN-------------- 96
           +D + V+ +          A    V   I        +PI D   N              
Sbjct: 55  RDDELVEFAFEGVDYVFHQAAQASVPRSIE-------DPIKDHEVNVLGTLNLLEAARKA 107

Query: 97  -LEQFIYCSSAGVYLKSDLLPHCE------------SRHKGKLNTESVLESKGVNWTSLR 143
            +++F+Y SS+ VY     LP  E            S++ G+L  +      G+   SLR
Sbjct: 108 GVKRFVYASSSSVYGDPPYLPKDEDHPPNPLSPYAVSKYAGELYCQVFARLYGLPTVSLR 167

Query: 144 PVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN 198
              +YGP       Y  V   F  R   G P  I G G Q     +V+D+  A +     
Sbjct: 168 YFNVYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVVEANLLAA-T 226

Query: 199 EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFF 258
             A  +V+NI   K  + + LA    +  G  E E V+  P+  D           +H  
Sbjct: 227 AGAGGEVYNIGTGKRTSVNELAELIREILG-KELEPVYAPPRPGDV----------RHSL 275

Query: 259 ASVEKAKHVLGWKPEFDLVEGLA 281
           A + KAK +LGW+P+    EGL 
Sbjct: 276 ADISKAKKLLGWEPKVSFEEGLR 298

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 71.7 bits (176), Expect = 3e-14
 Identities = 83/344 (24%), Positives = 128/344 (37%), Gaps = 80/344 (23%)

Query: 2   GGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           GG+ F G  L + L++  G  V  F       A       + EF         LKGD  D
Sbjct: 6   GGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPNIEF---------LKGDITD 56

Query: 61  YDFVKSSLSAKGFDVVYDI-------NGRE-ADEV-----EPILDALP--NLEQFIYCSS 105
            + V+ +LS  G D V+           R+   EV     + +LDA     +++F+Y SS
Sbjct: 57  RNDVEQALS--GADCVFHTAAIVPLAGPRDLYWEVNVGGTQNVLDACQRCGVQKFVYTSS 114

Query: 106 AGV---------------YLKSDLLPHCESRHKGKLNTESVLESKGVN---WTSLRPVYI 147
           + V               Y   D   + E++   +     VLE+ G +     +LRP  I
Sbjct: 115 SSVIFGGQNIHNGDETLPYPPLDSDMYAETKAIAE---IIVLEANGRDDLLTCALRPAGI 171

Query: 148 YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV----LGNEKASR 203
           +GP     +    F   + G    + G G  +    +V +LA A +      +  +  S 
Sbjct: 172 FGP-GDQGLVPILFEWAEKGLVKFVFGRGNNLVDFTYVHNLAHAHILAAAALVKGKTISG 230

Query: 204 QVFNISGEKYVTFDGLARACAKAAGF--------PEP---------ELVHYNPKEFDFGK 246
           Q + I+  +      L R   KA GF          P         ELV      F  G 
Sbjct: 231 QTYFITDAEPHNMFELLRPVWKALGFGSRPKIRLSGPLAYCAALLSELVS-----FMLGP 285

Query: 247 KKAF-PFRDQH----FFASVEKAKHVLGWKPEFDLVEGLADSYN 285
              F PF  +      + S+ KA+  LG+ P +   EGL ++ N
Sbjct: 286 YFVFSPFYVRALVTPMYFSIAKAQKDLGYAPRYSNEEGLIETLN 329

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 69.6 bits (171), Expect = 9e-14
 Identities = 57/255 (22%), Positives = 96/255 (37%), Gaps = 54/255 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP-GESDQEFAEFSSKILHLKGDRKD 60
           G T FIG ++   L K G QV +  R +A   + L  G+  Q        +L ++ D +D
Sbjct: 7   GATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDLGQ--------VLFVEFDLRD 58

Query: 61  YDFVKSSLSAKGFDVVYDINGRE----ADEVEPILDALP----------NLEQFIYCSSA 106
            + ++ +L  +G DVV ++ GR         E +    P           +E+ I+ S+ 
Sbjct: 59  DESIRKAL--EGSDVVINLVGRLYETKNFSFEDVHVEGPERLAKAAKEAGVERLIHISAL 116

Query: 107 GV-------YLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEW 159
           G        YL+S            K   E  +       T +RP  ++G  +       
Sbjct: 117 GADANSPSKYLRS------------KAEGEEAVREAFPEATIVRPSVVFGREDR------ 158

Query: 160 FFHRLKAGR---P-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT 215
           F +R        P  P+ G G    Q  +V D+A A  + L + +   + + + G K  T
Sbjct: 159 FLNRFAKLLAFLPFPPLIGGGQTKFQPVYVGDVAEAIARALKDPETEGKTYELVGPKVYT 218

Query: 216 FDGLARACAKAAGFP 230
              L     +  G  
Sbjct: 219 LAELVELLRRLGGRK 233

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 70.0 bits (172), Expect = 1e-13
 Identities = 66/332 (19%), Positives = 116/332 (34%), Gaps = 74/332 (22%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L+  L++EGH+V       +  +  L   +  +   F      + GD +D 
Sbjct: 6   GADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHF------ISGDVRDA 59

Query: 62  DFVKSSLSAKGFDVVY---------DINGREADEVEPIL--DALP-------NLEQFIYC 103
             V+  +  K  DVV+                  VE  +               ++ ++ 
Sbjct: 60  SEVEYLV--KKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLYRKRVVHT 117

Query: 104 SSAGVYLKSDLLPHCESRHKGKLNT----------------ESVLESKGVNWTSLRPVYI 147
           S++ VY  +  +P  E      +N                  S   S G+  T +RP   
Sbjct: 118 STSEVYGTAQDVPIDEDHPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTIIRPFNT 177

Query: 148 YGPLNYNPVEEWFFHRLKAGRPIPIP-------------GSGIQVTQLGHVKDLARAFVQ 194
           YGP            R  A   IP               G G        VKD AR F+ 
Sbjct: 178 YGP------------RQSARAVIPTIISQRAIGQRLINLGDGSPTRDFNFVKDTARGFID 225

Query: 195 VLGNEKASRQVFNISGEKYVTF-DGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFR 253
           +L   +A  ++ N    + ++  +       +  G     +V+ + +E+  G  +     
Sbjct: 226 ILDAIEAVGEIINNGSGEEISIGNPAVELIVEELG-EMVLIVYDDHREYRPGYSEV---- 280

Query: 254 DQHFFASVEKAKHVLGWKPEFDLVEGLADSYN 285
            +     + KAK +LGW+P++ L +GL ++  
Sbjct: 281 -ERRIPDIRKAKRLLGWEPKYSLRDGLRETIE 311

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 69.5 bits (171), Expect = 1e-13
 Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 33/171 (19%)

Query: 129 ESVLESKGVNWTSLRPVYIYGP-LNYNPVEEWF-------FHRLKA--GRPIPIPGSGIQ 178
           E+  +  G ++ S+ P  +YGP  N++P            FH  K   G+ + + GSG  
Sbjct: 144 EAYRKQYGCDYISVMPTNLYGPHDNFDPENSHVIPALIRKFHEAKLRGGKEVTVWGSGTP 203

Query: 179 VTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYN 238
             +  +  DLARA V +L N      + N+     ++   LA A A+  GF + E+V   
Sbjct: 204 RREFLYSDDLARAIVFLLENY-DEPIIVNVGSGVEISIRELAEAIAEVVGF-KGEIV--- 258

Query: 239 PKEFDFGK-----KKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSY 284
              FD  K     +K            V K +  LGW P   L +G+ ++Y
Sbjct: 259 ---FDTSKPDGQPRKL---------LDVSKLRA-LGWFPFTPLEQGIRETY 296

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 63.9 bits (156), Expect = 1e-11
 Identities = 64/307 (20%), Positives = 103/307 (33%), Gaps = 50/307 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKD 60
           G T FIG  + R LV  GH+V    R            SD   A+  +      +GD +D
Sbjct: 7   GATGFIGSAVVRELVAAGHEVVGLAR------------SDAGAAKLEAAGAQVHRGDLED 54

Query: 61  YDFVKSSLSAK------GFDVVYDINGREADE----VEPILDALPNLEQ-FIYCSSAGVY 109
            D ++ + +         F   +D   +  +     +E + +AL    +  IY S   + 
Sbjct: 55  LDILRKAAAEADAVIHLAFTHDFDNFAQACEVDRRAIEALGEALRGTGKPLIYTSGIWLL 114

Query: 110 LKS--DLLPHCESRHKGKLNTESVLE-------SKGVNWTSLR-PVYIYGPLNYNPVEEW 159
             +                   +V E        +GV  + +R P     P+ +   +  
Sbjct: 115 GPTGGQEEDEEAPDDPPTPAARAVSEAAALELAERGVRASVVRLP-----PVVHGRGDHG 169

Query: 160 FF----HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT 215
           F        +        G G       H  D AR +   L   KA   V++   E+ + 
Sbjct: 170 FVPMLIAIAREKGVSAYVGDGKNRWPAVHRDDAARLYRLALEKGKA-GSVYHAVAEEGIP 228

Query: 216 FDGLARACAKAAGFP-EPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF 274
              +A A  +  G P            F +     F   DQ    S +K +  LGWKP+ 
Sbjct: 229 VKDIAEAIGRRLGVPVVSIPAEEAAAHFGWL--AMFVALDQP--VSSQKTRRRLGWKPQQ 284

Query: 275 -DLVEGL 280
             L+E L
Sbjct: 285 PSLLEDL 291

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 57.3 bits (139), Expect = 5e-10
 Identities = 45/208 (21%), Positives = 71/208 (34%), Gaps = 45/208 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  L + L+  GHQVT  +R  +                 +  +  ++ D  D 
Sbjct: 5   GATGKTGRRLVKELLARGHQVTALSRNPSKAP--------------APGVTPVQKDLFDL 50

Query: 62  DFVKSSLSAKGFDVVYD-INGREADE--VEPILDALPNL--EQFIYCSSAGVY------- 109
             +  +L   G D V D    R  D   V+ +LDA       + +  S+AG+Y       
Sbjct: 51  ADLAEAL--AGVDAVVDAFGARPDDSDGVKHLLDAAARAGVRRIVVVSAAGLYRDEPGTF 108

Query: 110 -LKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR 168
            L    L    +R K     E +L + G++WT +RP  ++        E           
Sbjct: 109 RLDDAPLFPPYARAKAAA--EELLRASGLDWTIVRPGALFDE-EGETYEIGTEGDPAGES 165

Query: 169 PIPIPGSGIQVTQLGHVKDLARAFVQVL 196
            I                D+A A +  L
Sbjct: 166 SI-------------SRADVAAALLDEL 180

Length = 182

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 57.2 bits (138), Expect = 2e-09
 Identities = 50/235 (21%), Positives = 77/235 (32%), Gaps = 26/235 (11%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKD 60
           G T F+G  + R L+  GH+V    R     A  L G  +    +    K L       D
Sbjct: 7   GATGFVGGAVVRELLARGHEVRAAVRNPEA-AAALAGGVEVVLGDLRDPKSLVAGAKGVD 65

Query: 61  YDFVKSSLSAKG-----FDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLL 115
              + S L           V   +   EA        A   ++  +  S  G    S   
Sbjct: 66  GVLLISGLLDGSDAFRAVQVTAVVRAAEA--------AGAGVKHGVSLSVLGADAASP-- 115

Query: 116 PHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGS 175
               +  + K   E+ L S G+ +T+LR    Y          +      AG P+   G 
Sbjct: 116 ---SALARAKAAVEAALRSSGIPYTTLRRAAFYLGAGA----AFIEAAEAAGLPVIPRGI 168

Query: 176 GIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFP 230
           G        V D+A A    L     + + + ++G + +T   LA       G P
Sbjct: 169 G--RLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASGLDYTIGRP 221

Length = 275

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 55.7 bits (135), Expect = 3e-09
 Identities = 44/220 (20%), Positives = 74/220 (33%), Gaps = 31/220 (14%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDR 58
           G T  +G  + R L+  G+QV    R  +   +     ++    +     S    L+G  
Sbjct: 6   GATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGAEVVVGDLTDAESLAAALEG-- 63

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADE--VEPILDALP--NLEQFIYCSSAGVYLKSDL 114
              D V S+  + G            D      ++DA     +++F+  SS G    S  
Sbjct: 64  --IDAVISAAGSGGKG---GPRTEAVDYDGNINLIDAAKKAGVKRFVLVSSIGADKPSHP 118

Query: 115 LPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI--PI 172
           L         K   E  L + G+++T +RP    G L  +P           G  +  PI
Sbjct: 119 LEALGPYLDAKRKAEDYLRASGLDYTIVRP----GGLTDDPAGTGRVVLGGDGTRLDGPI 174

Query: 173 PGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK 212
             +           D+A    + L    A  + F + G  
Sbjct: 175 SRA-----------DVAEVLAEALDTPAAIGKTFELGGGD 203

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 52/236 (22%), Positives = 91/236 (38%), Gaps = 37/236 (15%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T  +G  +  LL+ +   V    R           E  + FA    ++        DY
Sbjct: 5   GATGKLGTAVVELLLAKVASVVALVRN---------PEKAKAFAADGVEVRQG-----DY 50

Query: 62  DFVKSSLSA-KGFDVVY----DINGREADEVEPILDAL--PNLEQFIYCSSAGVYLKSDL 114
           D  ++   A +G D +             + +  +DA     ++  +Y S++G    S  
Sbjct: 51  DDPETLERAFEGVDRLLLISPSDLEDRIQQHKNFIDAAKQAGVKHIVYLSASGADEDSPF 110

Query: 115 LPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 174
           L    +R  G   TE  LE+ G+ +T LRP +    L      E+    L+ G      G
Sbjct: 111 LL---ARDHGA--TEKYLEASGIPYTILRPGWFMDNLL-----EFLPSILEEGTIYGPAG 160

Query: 175 SGIQVTQLGHV--KDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG 228
            G     +  V  +D+A A    L       +V+N++G + +++  LA   ++A G
Sbjct: 161 DGK----VAFVDRRDIAEAAAAALTEPGHEGKVYNLTGPEALSYAELAAILSEALG 212

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 56.4 bits (137), Expect = 5e-09
 Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 18/153 (11%)

Query: 133 ESKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 188
            + G+     R    YGP  +     P+   F      G+P+PI G G+ V    +V+D 
Sbjct: 166 RTYGLPVVITRCSNNYGPYQFPEKLIPL---FILNALDGKPLPIYGDGLNVRDWLYVEDH 222

Query: 189 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKK 248
           ARA   VL  +    +++NI G   +T   L +   +  G  E  L+ Y           
Sbjct: 223 ARAIELVL-EKGRVGEIYNIGGGNELTNLELVKLILELLGKDE-SLITYVKDR------- 273

Query: 249 AFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLA 281
             P  D+ +     K +  LGW+P+    EGL 
Sbjct: 274 --PGHDRRYAIDSSKIRRELGWRPKVSFEEGLR 304

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 54.4 bits (131), Expect = 2e-08
 Identities = 71/329 (21%), Positives = 115/329 (34%), Gaps = 72/329 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L+  L  EGH V    RG A            +  EF         D ++ 
Sbjct: 7   GAGGFIGSHLAERLKAEGHYV----RG-ADWKSPEHMTQPTDDDEF------HLVDLREM 55

Query: 62  DFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN---------------LEQFIY 102
           +    +    G D V+    D+ G    +    +    N               +E+F++
Sbjct: 56  ENCLKATE--GVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARINGVERFLF 113

Query: 103 CSSAGVY-----LKSDLLPHCES------RHKG----KLNTESVL----ESKGVNWTSLR 143
            SSA VY     L++ ++   E               KL TE +     E  G+    +R
Sbjct: 114 ASSACVYPEFKQLETTVVRLREEDAWPAEPQDAYGWEKLATERLCQHYNEDYGIETRIVR 173

Query: 144 PVYIYGPL-NYNPVEEWFFHRL-------KAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 195
              IYGP   ++   E     +       K G    I G G+Q     ++ D      ++
Sbjct: 174 FHNIYGPRGTWDGGREKAPAAMCRKVATAKDGDRFEIWGDGLQTRSFTYIDDCVEGLRRL 233

Query: 196 LGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQ 255
           +  E    +  N+  ++ V+ + LA      +G P  E++H+ P           P   +
Sbjct: 234 M--ESDFGEPVNLGSDEMVSMNELAEMVLSFSGKPL-EIIHHTPG----------PQGVR 280

Query: 256 HFFASVEKAKHVLGWKPEFDLVEGLADSY 284
              +     K  LGW+P   L EGL  +Y
Sbjct: 281 GRNSDNTLLKEELGWEPNTPLEEGLRITY 309

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 67/339 (19%), Positives = 114/339 (33%), Gaps = 84/339 (24%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T F+G  L R L+ +G++V    R  +  A  L G    E  E         GD  D 
Sbjct: 5   GATGFLGSNLVRALLAQGYRVRALVRSGSD-AVLLDGL-PVEVVE---------GDLTDA 53

Query: 62  DFVKSSLSAKGFDVVY------DINGREADEVEPI-LDALPNL---------EQFIYCSS 105
             + +++  KG D V+       +  ++  E+    ++   N+          + ++ SS
Sbjct: 54  ASLAAAM--KGCDRVFHLAAFTSLWAKDRKELYRTNVEGTRNVLDAALEAGVRRVVHTSS 111

Query: 106 AGVY---------------LKSDLLPHCESRHKGKLNTESVLE--SKGVNWTSLRPVYIY 148
                               +     +  S+   +L    VLE  ++G++   + P  ++
Sbjct: 112 IAALGGPPDGRIDETTPWNERPFPNDYYRSKLLAEL---EVLEAAAEGLDVVIVNPSAVF 168

Query: 149 GPLNYNPVEEWFFHRLKAGRPIP-IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN 207
           GP +  P              +P  P  G        V+D+A   +  +  EK  R    
Sbjct: 169 GPGDEGPTSTGLDVLDYLNGKLPAYPPGGTSFV---DVRDVAEGHIAAM--EKGRR---- 219

Query: 208 ISGEKY------VTFDGLARACAKAAGFPEPELVHYNP-----------KEFDFGKKKAF 250
             GE+Y      ++F  L    A+  G   P                  K    GK    
Sbjct: 220 --GERYILGGENLSFKQLFETLAEITGVKPPRRTIPPWLLKAVAALSELKARLTGKPPLL 277

Query: 251 PFRDQH-----FFASVEKAKHVLGWKPEFDLVEGLADSY 284
             R        +  S +KA+  LG+ P   L E L D+ 
Sbjct: 278 TPRTARVLRRNYLYSSDKARRELGYSPR-PLEEALRDTL 315

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|178326 PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 49/161 (30%), Positives = 66/161 (40%), Gaps = 27/161 (16%)

Query: 136 GVNWTSLRPVYIYGPLNYNPVEEWF--------FHRLKA-GRPIPIP-GSGIQVTQLGHV 185
           G +  S  P  +YGP +    E           FH  KA G P  +  GSG  + +  HV
Sbjct: 149 GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHV 208

Query: 186 KDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFG 245
            DLA A V ++     +  V N+     VT   LA    +  GF E ELV      +D  
Sbjct: 209 DDLADAVVFLMRRYSGAEHV-NVGSGDEVTIKELAELVKEVVGF-EGELV------WDTS 260

Query: 246 KKKAFPFR--DQHFFASVEKAKHVLGWKPEFDLVEGLADSY 284
           K    P +  D     S       LGW P+F L +GL ++Y
Sbjct: 261 KPDGTPRKLMDSSKLRS-------LGWDPKFSLKDGLQETY 294

Length = 306

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 53.9 bits (130), Expect = 3e-08
 Identities = 52/215 (24%), Positives = 77/215 (35%), Gaps = 44/215 (20%)

Query: 97  LEQFIYCSSAGVY--LKSDLLPHCE------------SRHKGKLN---TESVLESKGVNW 139
           + + +  SS  VY     +  P  E            SR K ++     E       +N 
Sbjct: 102 VPRVVVTSSVAVYGAHPDNPAPLTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNV 161

Query: 140 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE 199
           T LRP  I GP   N      F    + R +P+PG      Q  H  D+ARA V  L   
Sbjct: 162 TVLRPATILGPGTRN--TTRDF---LSPRRLPVPGGFDPPFQFLHEDDVARALV--LAVR 214

Query: 200 KASRQVFNISGEKYVTFDGLARAC-AKAAGFPEP-----------ELVHYNPKEFDFGKK 247
             +  +FN++G+  V    +      +    P P            L    P++ DF + 
Sbjct: 215 AGATGIFNVAGDGPVPLSLVLALLGRRPVPLPSPLPAALAAARRLGLRPLPPEQLDFLQY 274

Query: 248 KAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLAD 282
              P  D        +A+  LGW+P+    E L D
Sbjct: 275 P--PVMD------TTRARVELGWQPKHTSAEVLRD 301

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 52.7 bits (127), Expect = 8e-08
 Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 13/130 (10%)

Query: 159 WFFHRLKAGRPIPIPGSG-IQVTQLGHVKDLARAFVQVLGNEKASR-QVFNISGEKYVTF 216
           +F      G+P+ I G G  QV  + H  DL   +++   N    + +VFNI G      
Sbjct: 216 YFLKCAVTGKPLTIFGYGGKQVRDVLHSADLVNLYLRQFQNPDRRKGEVFNIGG------ 269

Query: 217 DGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFF-ASVEKAKHVLGWKPEFD 275
            G   + +        E +     E    + +     DQ ++ + + K K   GWKPE D
Sbjct: 270 -GRENSVSLLELIALCEEITGRKMESYKDENRPG---DQIWYISDIRKIKEKPGWKPERD 325

Query: 276 LVEGLADSYN 285
             E LA+ Y 
Sbjct: 326 PREILAEIYA 335

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 50.5 bits (121), Expect = 1e-07
 Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 28/163 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T FIG  L+R L+++GH+VTL  R           + DQE           +GD +D 
Sbjct: 5   GATGFIGRALARELLEQGHEVTLLVRNTKR-----LSKEDQEPVAVV------EGDLRDL 53

Query: 62  DFVKSSLSAKGFDVVY-----DINGREADEVEP-----ILDALP--NLEQFIYCSSAGVY 109
           D +  ++  +G DVV        + R+  EV+      +L+A     ++ FI+ SS G Y
Sbjct: 54  DSLSDAV--QGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFISSLGAY 111

Query: 110 --LKSDLLPHCESRHKG-KLNTESVLESKGVNWTSLRPVYIYG 149
             L  +  P   S +   K  TE+VL    + +T +RP  IYG
Sbjct: 112 GDLHEETEPSPSSPYLAVKAKTEAVLREASLPYTIVRPGVIYG 154

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 50.2 bits (120), Expect = 5e-07
 Identities = 72/296 (24%), Positives = 110/296 (37%), Gaps = 59/296 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGES------------DQEFAE 46
           GG   IG  L   L++ GHQV +   F  G+       P  +            D+ F +
Sbjct: 7   GGAGQIGSHLIEHLLERGHQVVVIDNFATGRREHLPDHPNLTVVEGSIADKALVDKLFGD 66

Query: 47  FS-SKILHLKGDRKDYD-FVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCS 104
           F    ++H     KD D + + +L+    +VV   N  +A +          +++ IY  
Sbjct: 67  FKPDAVVHTAAAYKDPDDWYEDTLT----NVVGGANVVQAAKKA-------GVKRLIYFQ 115

Query: 105 SAGVY-LKSDLLP--------HCESRHK-GKLNTESVLESKGVNWTSLRPVYIYGPLNYN 154
           +A  Y LK    P           S +   K   E  LE  GV++ + R   + GP N  
Sbjct: 116 TALCYGLKPMQQPIRLDHPRAPPGSSYAISKTAGEYYLELSGVDFVTFRLANVTGPRNVI 175

Query: 155 PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGEKY 213
                F+ RLKAG+   +  +         VKDLAR   + L +       ++  SGE  
Sbjct: 176 GPLPTFYQRLKAGKKCFVTDT---RRDFVFVKDLARVVDKAL-DGIRGHGAYHFSSGEDV 231

Query: 214 VT---FDGLARACAKAAGFPEPELVHYNPKEF------------DFGKKKAFPFRD 254
                FD +  A       PE E+V   P +             DFG K+  P  +
Sbjct: 232 SIKELFDAVVEALD-LPLRPEVEVVELGPDDVPSILLDPSRTFQDFGWKEFTPLSE 286

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 50.0 bits (120), Expect = 5e-07
 Identities = 72/327 (22%), Positives = 104/327 (31%), Gaps = 78/327 (23%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L   L+  G +V +  R           E     AE               
Sbjct: 6   GANGFIGRALVDKLLSRGEEVRIAVR------NAENAEPSVVLAELP------------- 46

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALP-----NLE---------------QFI 101
           D    +    G D V  +  R     +   D L      N E               +F+
Sbjct: 47  DIDSFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFV 106

Query: 102 YCSSAGVYLKSDLLPHCESRH-----------KGKLNTESVL----ESKGVNWTSLRPVY 146
           + SS  V  +                      + KL  E  L     S G+    LRP  
Sbjct: 107 FLSSVKVNGEGT--VGAPFDETDPPAPQDAYGRSKLEAERALLELGASDGMEVVILRPPM 164

Query: 147 IYGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 203
           +YGP    N+  +       +  G P+P PG+      L  + +L  A    +   KA+ 
Sbjct: 165 VYGPGVRGNFARLMRL----IDRGLPLP-PGAVKNRRSLVSLDNLVDAIYLCISLPKAAN 219

Query: 204 QVFNISGEKYVT----FDGLARACAKAA-GFPEPELVHYNPKEFDFGKKKAFPFRDQHFF 258
             F +S    V+     D + RA  K     P P  +     +   GK+       Q  F
Sbjct: 220 GTFLVSDGPPVSTAELVDEIRRALGKPTRLLPVPAGLLRFAAKL-LGKRAVI----QRLF 274

Query: 259 ASV----EKAKHVLGWKPEFDLVEGLA 281
            S+    EK ++ LGW+P   L EGL 
Sbjct: 275 GSLQYDPEKTQNELGWRPPISLEEGLQ 301

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 49.2 bits (118), Expect = 7e-07
 Identities = 49/240 (20%), Positives = 95/240 (39%), Gaps = 37/240 (15%)

Query: 14  LLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG 72
           LL   G +V   TR   +P A+ L     +            +GD  D + ++++L  KG
Sbjct: 18  LLKDPGFKVRALTRDPSSPAAKALAAPGVEVV----------QGDLDDPESLEAAL--KG 65

Query: 73  FDVVY----DINGREADEVE---PILDAL--PNLEQFIYCSSAGVYLKSDLLPHCESRHK 123
              V+           DE+     ++DA     ++ F++ S   V   +  +PH +S+ +
Sbjct: 66  VYGVFLVTDFWEAGGEDEIAQGKNVVDAAKRAGVQHFVFSSVPDVEKLTLAVPHFDSKAE 125

Query: 124 GKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQL 182
                E  + + G+  T LRP +       N +      +++ G   + +P        +
Sbjct: 126 ----VEEYIRASGLPATILRPAFFM----ENFLTPPAPQKMEDGTLTLVLPLDPDTKLPM 177

Query: 183 GHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKE 241
             V D+  A   +  +  K + +   ++G++  T + +A A +K  G P    V Y   E
Sbjct: 178 IDVADIGPAVAAIFKDPAKFNGKTIELAGDEL-TPEEIAAAFSKVLGKP----VTYVQVE 232

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 41/150 (27%), Positives = 58/150 (38%), Gaps = 18/150 (12%)

Query: 136 GVNWTSLRPVYIYGPLNYNPVEEW---FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 192
           G+     R    YGP  Y   E+          AG+P+P+ G G QV    +V+D  RA 
Sbjct: 169 GLPALITRCSNNYGP--YQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAI 226

Query: 193 VQVLGNEKA-SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFP 251
             VL  EK    + +NI G    T   +     +  G  E  + H   +          P
Sbjct: 227 YLVL--EKGRVGETYNIGGGNERTNLEVVETILELLGKDEDLITHVEDR----------P 274

Query: 252 FRDQHFFASVEKAKHVLGWKPEFDLVEGLA 281
             D+ +     K K  LGW P++   EGL 
Sbjct: 275 GHDRRYAIDASKIKRELGWAPKYTFEEGLR 304

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 46.5 bits (111), Expect = 4e-06
 Identities = 50/242 (20%), Positives = 73/242 (30%), Gaps = 75/242 (30%)

Query: 2   GGTRFIGVFLSRLLVKE----GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           G T   G      +V+E    GH+VT   R  A +                 K+  ++GD
Sbjct: 6   GATGRTG----SAIVREALARGHEVTALVRDPAKL------------PAEHEKLKVVQGD 49

Query: 58  RKDYDFVKSSLSAKGFDVVYDINGREADEVEP---------ILDALPNLE--QFIYCSSA 106
             D + VK +L  +G D V    G   D             I+ A+      + I    A
Sbjct: 50  VLDLEDVKEAL--EGQDAVISALGTRNDLSPTTLHSEGTRNIVSAMKAAGVKRLIVVGGA 107

Query: 107 GV---------YLKSDLLPHCESR-HKGKLNTESVLESKGVNWTSLRP----------VY 146
           G           L + L P    R  +       VL   G++WT++RP           Y
Sbjct: 108 GSLDDRPKVTLVLDTLLFPPALRRVAEDHARMLKVLRESGLDWTAVRPPALFDGGATGGY 167

Query: 147 IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 206
               L  +                   GS I         DLA   +  L   +  R+  
Sbjct: 168 YRVELLVDAK----------------GGSRIS------RADLAIFMLDELETPEHVRKRP 205

Query: 207 NI 208
            I
Sbjct: 206 TI 207

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 44.3 bits (105), Expect = 4e-05
 Identities = 76/344 (22%), Positives = 127/344 (36%), Gaps = 84/344 (24%)

Query: 2   GGTRFIGVFL-SRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           GG+ F+G  L  +LL +    V +F        +  P  S +        +    GD  D
Sbjct: 6   GGSGFLGRHLVEQLLRRGNPTVHVFDIRPTF--ELDPSSSGR--------VQFHTGDLTD 55

Query: 61  YDFVKSSLSAKGFDVV---------------YDINGREADEVEPILDAL--PNLEQFIYC 103
              ++ + + KG +VV               Y +N         +++A     +++ +Y 
Sbjct: 56  PQDLEKAFNEKGPNVVFHTASPDHGSNDDLYYKVN---VQGTRNVIEACRKCGVKKLVYT 112

Query: 104 SSAGV-YLKSDLLPHCES-----RHKGKLNT------ESVLE----SKGVNWTSLRPVYI 147
           SSA V +   D++   ES     +H+   N       + VL+      G+   +LRP  I
Sbjct: 113 SSASVVFNGQDIINGDESLPYPDKHQDAYNETKALAEKLVLKANDPESGLLTCALRPAGI 172

Query: 148 YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQV---TQLGHVKD----LARAFVQVLGNEK 200
           +GP +   V        K G+     G G  +   T + +V       A A +     E 
Sbjct: 173 FGPGDRQLVPG-LLKAAKNGKTKFQIGDGNNLFDFTYVENVAHAHILAADALLSSSHAET 231

Query: 201 ASRQVFNISGEKYVTFDGLARACAKAAGFPEP-----------------ELVHYNPKEFD 243
            + + F I+ ++ + F   ARA  +  G+  P                 E          
Sbjct: 232 VAGEAFFITNDEPIYFWDFARAIWEGLGYERPPSIKLPRPVALYLASLLEWTCKV----- 286

Query: 244 FGKKKAF-PFR-----DQHFFASVEKAKHVLGWKPEFDLVEGLA 281
            GK+  F PFR        +F ++EKAK  LG+ P   L EG+ 
Sbjct: 287 LGKEPTFTPFRVALLCSTRYF-NIEKAKKRLGYTPVVTLEEGIE 329

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 43.8 bits (104), Expect = 5e-05
 Identities = 74/321 (23%), Positives = 120/321 (37%), Gaps = 72/321 (22%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           GG  F+G  L   L+++GH+V      FT  K  I   L G  + EF         ++ D
Sbjct: 7   GGAGFLGSHLCDRLLEDGHEVICVDNFFTGRKRNIEH-LIGHPNFEF---------IRHD 56

Query: 58  RKDYDFVKSSLSAKGFDVVYDINGR------EADEVEPI----LDALPNLE-------QF 100
             +  +++        D +Y +         + + ++ +    L  L  L        + 
Sbjct: 57  VTEPLYLE-------VDQIYHLACPASPVHYQYNPIKTLKTNVLGTLNMLGLAKRVGARV 109

Query: 101 IYCSSAGVYLKSDLLPHCESRHKGKLNTESVL----ESK--------------GVNWTSL 142
           +  S++ VY   ++ P  ES + G +N         E K              GV+    
Sbjct: 110 LLASTSEVYGDPEVHPQPES-YWGNVNPIGPRSCYDEGKRVAETLCMAYHRQHGVDVRIA 168

Query: 143 RPVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE 199
           R    YGP    N   V   F  +   G PI + G G Q     +V DL    ++++ ++
Sbjct: 169 RIFNTYGPRMHPNDGRVVSNFIVQALRGEPITVYGDGTQTRSFQYVSDLVEGLIRLMNSD 228

Query: 200 KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFA 259
                  N+   +  T   LA    K  G  + E+V     E D       P R +    
Sbjct: 229 YFG-GPVNLGNPEEFTILELAELVKKLTG-SKSEIVFLPLPEDD-------PKRRR---P 276

Query: 260 SVEKAKHVLGWKPEFDLVEGL 280
            + KAK +LGW+P+  L EGL
Sbjct: 277 DISKAKELLGWEPKVPLEEGL 297

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 43.5 bits (103), Expect = 7e-05
 Identities = 60/282 (21%), Positives = 98/282 (34%), Gaps = 52/282 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           GGT F+G  L + L++ G +V +  R ++   A +   E+  E          L+GD   
Sbjct: 5   GGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRV----LEGDLTQ 60

Query: 61  YDFVKSSLS-------AKGFDVV------YDING--READEV-----EPILDALPNLEQ- 99
            +     LS       A   D V      YD      +A        E +L+    L+  
Sbjct: 61  PNL---GLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGTEHVLELAARLDIQ 117

Query: 100 -FIYCSSAGVY-LKSDLLPHCESRHKGKLNT---ESVLES--------KGVNWTSLRPVY 146
            F Y S+A V   +   +   E            +S  E+          +  T  RP  
Sbjct: 118 RFHYVSTAYVAGNREGNIRETELNPGQNFKNPYEQSKAEAEQLVRAAATQIPLTVYRPSI 177

Query: 147 IYGPLN-------YNPVEEWFFHRL-KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN 198
           + G              E    + L K GR +P+PG+      L  V  +A A V +   
Sbjct: 178 VVGDSKTGRIEKIDGLYE--LLNLLAKLGRWLPMPGNKGARLNLVPVDYVADAIVYLSKK 235

Query: 199 EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPK 240
            +A+ Q+F+++     T   +A     A   P   ++  N  
Sbjct: 236 PEANGQIFHLTDPTPQTLREIADLFKSAFLSPGLLVLLMNEP 277

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|215146 PLN02260, PLN02260, probable rhamnose biosynthetic enzyme

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 13/115 (11%)

Query: 167 GRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKA 226
           G+P+PI G G  V    + +D+A AF  VL ++     V+NI  +K      +A+   K 
Sbjct: 210 GKPLPIHGDGSNVRSYLYCEDVAEAFEVVL-HKGEVGHVYNIGTKKERRVIDVAKDICKL 268

Query: 227 AGF-PEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGL 280
            G  PE  +     +          PF DQ +F   +K K  LGW+      EGL
Sbjct: 269 FGLDPEKSIKFVENR----------PFNDQRYFLDDQKLK-KLGWQERTSWEEGL 312

Length = 668

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 70/316 (22%), Positives = 116/316 (36%), Gaps = 73/316 (23%)

Query: 6   FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK 65
           FIG  L   LV++G++V  F    +       G  D    E   KI  + GD +D D V+
Sbjct: 9   FIGSHLVEALVRQGYEVRAFVLYNS---FNSWGWLDTSPPEVKDKIEVVTGDIRDPDSVR 65

Query: 66  SSLSAKGFDVVY---------------------DINGREADEVEPILDALPNLEQFIYCS 104
            ++  KG DVV+                     ++ G   + ++   D    +E+ ++ S
Sbjct: 66  KAM--KGCDVVFHLAALIAIPYSYIAPDSYVDTNVTG-TLNVLQAARDL--GVEKVVHTS 120

Query: 105 SAGVYLKSDLLPHCESRHK--------GKLNT----ESVLESKGVNWTSLRPVYIYGPLN 152
           ++ VY  +  +P  E             K+       S   S     T +RP   YGP  
Sbjct: 121 TSEVYGTAQYVPIDEKHPLQGQSPYSASKIGADQLALSFYRSFNTPVTIIRPFNTYGP-- 178

Query: 153 YNPVEEWFFHRLKAGRPIP-IPG---SGIQVTQLG---------HVKDLARAFVQVLGNE 199
                     R  A   IP I     SG +  +LG         +V D  R F+ +  ++
Sbjct: 179 ----------RQSARAVIPTIITQIASGKRRIKLGSLSPTRDFNYVTDTVRGFIAIAESD 228

Query: 200 KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFA 259
           K   +V NI     ++     +  A+  G  E E+      E     +K+   R    + 
Sbjct: 229 KTVGEVINIGSNFEISIGDTVKLIAEIMG-SEVEIET---DEERLRPEKSEVER---LWC 281

Query: 260 SVEKAKHVLGWKPEFD 275
              K K + GW+P++ 
Sbjct: 282 DNSKIKELTGWQPKYS 297

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 58/254 (22%), Positives = 95/254 (37%), Gaps = 44/254 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G +  IG  ++R L + G  V L +R G       LPG   +  A           D  D
Sbjct: 6   GASGPIGREVARELRRRGWDVRLVSRSGSKL--AWLPG--VEIVA----------ADAMD 51

Query: 61  YDFVKSSLSAKGFDVVYDING----READEVEPILD-----ALPNLEQFIYCSSAGVYLK 111
              V ++  A+G DV+Y        R  +   P+++     A  N  + +   +  +Y  
Sbjct: 52  ASSVIAA--ARGADVIYHCANPAYTRWEELFPPLMENVVAAAEANGAKLVLPGNVYMYGP 109

Query: 112 SDLLPHCESR------HKGKLN---TESVLES---KGVNWTSLRPVYIYGPLNYNPVEEW 159
               P  E         KG++     E +L +     +    +R    YGP   N    W
Sbjct: 110 QAGSPITEDTPFQPTTRKGRIRAEMEERLLAAHAKGDIRALIVRAPDFYGPGAINS---W 166

Query: 160 FFHRLKA---GRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTF 216
               L A   G+    PG+     +  ++ D+ARA V +     A  + +++ G   +T 
Sbjct: 167 LGAALFAILQGKTAVFPGNLDTPHEWTYLPDVARALVTLAEEPDAFGEAWHLPGAGAITT 226

Query: 217 DGLARACAKAAGFP 230
             L    A+AAG P
Sbjct: 227 RELIAIAARAAGRP 240

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 39/163 (23%), Positives = 62/163 (38%), Gaps = 23/163 (14%)

Query: 148 YGPLNYNPVEEW---FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA-SR 203
           YGP  Y   E+           G+P+P+ G G+Q+    +V+D  RA   VL   K    
Sbjct: 183 YGP--YQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVL--TKGKIG 238

Query: 204 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEK 263
           + +NI G    T   + +   +  G  +P+          F + +  P  D+ +     K
Sbjct: 239 ETYNIGGGNERTNLEVVKTICELLGKDKPDYRDL----ITFVEDR--PGHDRRYAIDASK 292

Query: 264 AKHVLGWKPEFDLVEGLADSY-----NLDFGR----GTYRKEA 297
            K  LGW+P+     GL  +      N  +      G Y K  
Sbjct: 293 IKRELGWRPQETFETGLRKTVDWYLDNEWWWEPLKDGEYAKYR 335

Length = 340

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 40.6 bits (96), Expect = 6e-04
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 19/107 (17%)

Query: 184 HVKDLARAFV---QVLGNEKASRQVFNI-SGEKYVTFDGLARACAKAAGFPEPELVHYNP 239
           HV DLA A V   + L N   S  ++N+ +G  Y   + +  A  K +G P P       
Sbjct: 228 HVVDLADAHVLALEKLENGGGSE-IYNLGTGRGYSVLE-VVEAFEKVSGKPIP------- 278

Query: 240 KEFDFGKKKAFPFRDQH-FFASVEKAKHVLGWKPEFDLVEGLADSYN 285
             ++   ++A    D     A   KA+  LGWKP+ DL +   D++N
Sbjct: 279 --YEIAPRRA---GDPASLVADPSKAREELGWKPKRDLEDMCEDAWN 320

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 68/293 (23%), Positives = 93/293 (31%), Gaps = 104/293 (35%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT FIG  L++ L K GH+VT+ TR   P A     E  + +A   +  L         
Sbjct: 5   GGTGFIGRALTQRLTKRGHEVTILTRSPPPGANTK-WEGYKPWAGEDADSL--------- 54

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILD------------------------ALPNL 97
                    +G D V ++ G      EPI D                        A+   
Sbjct: 55  ---------EGADAVINLAG------EPIADKRWTEERKQEIRDSRIDTTRLLVEAIAAA 99

Query: 98  EQ----FIYCSSAGVY--------------LKSDLLPH-C-----ESRHKGKLNTES--- 130
           EQ    FI  S+ G Y                 D L   C      ++    L T     
Sbjct: 100 EQKPKVFISASAVGYYGPSEDREYTEEDSPAGDDFLAELCRDWEEAAQAAEDLGTRVVLL 159

Query: 131 ----VLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 186
               VL  KG     +   +  G                 G P+   GSG Q     H++
Sbjct: 160 RTGIVLGPKGGALAKMLLPFRLG----------------LGGPL---GSGRQWFSWIHIE 200

Query: 187 DLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG----FPEPELV 235
           DL +  +  L N   S    N +  + V     A+A A+A      FP P  V
Sbjct: 201 DLVQLILFALENASVS-GPVNATAPEPVRNKEFAKALARALHRPAFFPVPAFV 252

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|206121 pfam13950, Epimerase_Csub, UDP-glucose 4-epimerase C-term subunit

 Score = 36.3 bits (85), Expect = 0.001
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 257 FFASVEKAKHVLGWKPEFDLVEGLADSYN 285
            +A   KA+  LGWK E  L +   DS+ 
Sbjct: 25  CYADPSKAEKELGWKAERGLEDMCRDSWR 53

This domain is the very C-terminal subunit of UDP-glucose 4-epimerase. Length = 62

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 2  GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE 39
          GGT FIG  L+R L   GH+V + +R +   A+ L   
Sbjct: 6  GGTGFIGRALTRRLTAAGHEVVVLSR-RPGKAEGLAEV 42

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 64/309 (20%), Positives = 116/309 (37%), Gaps = 57/309 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG  L   L++EG++V +     +   + +  E + +   F      +K D  D 
Sbjct: 6   GGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFENKAFRF------VKRDLLDT 59

Query: 62  DFVKSSLSAKGFDVVY------DINGREADEVEPILD---------------ALPNLEQF 100
                 ++ K  D V+      D+     D   P +D                   +++ 
Sbjct: 60  ---ADKVAKKDGDTVFHLAANPDVRLGATD---PDIDLEENVLATYNVLEAMRANGVKRI 113

Query: 101 IYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLESK----GVNWTSLRPVYIY 148
           ++ SS+ VY ++ ++P  E             KL  E+++ +     G      R   I 
Sbjct: 114 VFASSSTVYGEAKVIPTPEDYPPLPISVYGASKLAAEALISAYAHLFGFQAWIFRFANIV 173

Query: 149 GPLNYNPVEEWFFHRLKAGRP--IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 206
           GP + + V   F ++LK   P  + + G G Q     +V D   A +           +F
Sbjct: 174 GPRSTHGVIYDFINKLKR-NPNELEVLGDGRQRKSYLYVSDCVDAMLLAWEKSTEGVNIF 232

Query: 207 NISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKH 266
           N+  +  ++ + +A    +  G  +P   +      D G K   P+        +EK K 
Sbjct: 233 NLGNDDTISVNEIAEIVIEELGL-KPRFKY---SGGDRGWKGDVPY----MRLDIEKLK- 283

Query: 267 VLGWKPEFD 275
            LGWKP ++
Sbjct: 284 ALGWKPRYN 292

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 38.1 bits (89), Expect = 0.004
 Identities = 55/249 (22%), Positives = 93/249 (37%), Gaps = 50/249 (20%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
            G T  IG  ++  L++ G  V    R     A           A   ++++   GD  D
Sbjct: 4   TGATGRIGSKVATTLLEAGRPVRALVRSDERAA---------ALAARGAEVV--VGDLDD 52

Query: 61  YDFVKSSLSAKGFDVVY---------DINGREADEVEPILDALPN--LEQFIYCSSAGVY 109
              + ++L   G D V+         D         E    AL    +++ +  SS G  
Sbjct: 53  PAVLAAAL--AGVDAVFFLAPPAPTADARPGYVQAAEAFASALREAGVKRVVNLSSVGAD 110

Query: 110 LKSDLLPHCESRH-KGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR---LK 165
            +S       S   +G    E VL   G+    LRP +         +E          K
Sbjct: 111 PES------PSGLIRGHWLMEQVLNWAGLPVVHLRPAWF--------MENLLSQAPSIRK 156

Query: 166 AGR-PIPIPGSGIQVTQLGHV--KDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLAR 221
           AG   +P PG G    +L  +   D+AR   ++L + E    +V+ ++G + +T + +A 
Sbjct: 157 AGVLALPFPGDG----RLPPIATDDIARVAAKLLLDPEWHGHRVYELTGPEDLTMNEIAA 212

Query: 222 ACAKAAGFP 230
           A ++  G P
Sbjct: 213 ALSRVLGRP 221

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187559 cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs

 Score = 38.1 bits (89), Expect = 0.004
 Identities = 50/209 (23%), Positives = 75/209 (35%), Gaps = 44/209 (21%)

Query: 100 FIYCSSAGVYLKSDLLPHCESRHKGKLNTESV---------------LESKGVNWTSLRP 144
           FIY SSA VY    L    E      L   +V                +        LR 
Sbjct: 111 FIYASSAAVYGNGSL-GFAEDIETPNLRPLNVYGYSKLLFDQWARRHGKEVLSQVVGLRY 169

Query: 145 VYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGS------GIQVTQLGHVKDLARAFV 193
             +YGP  Y+      V    F+++KAG  + +  S      G Q+    +VKD+ +  +
Sbjct: 170 FNVYGPREYHKGRMASVVFHLFNQIKAGEKVKLFKSSDGYADGEQLRDFVYVKDVVKVNL 229

Query: 194 QVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPF- 252
             L N   S  +FN+   +  +F+ LA A  KA G  +   + Y            FP  
Sbjct: 230 FFLENPSVS-GIFNVGTGRARSFNDLASATFKALG--KEVKIEYID----------FPED 276

Query: 253 ---RDQHFFASVEKAKHVLGWKPEFDLVE 278
              + Q F  +        G+  EF  +E
Sbjct: 277 LRGKYQSFTEADISKLRAAGYTKEFHSLE 305

This subgroup contains ADP-L-glycero-D-mannoheptose 6-epimerase, an extended SDR, which catalyzes the NAD-dependent interconversion of ADP-D-glycero-D-mannoheptose and ADP-L-glycero-D-mannoheptose. This subgroup has the canonical active site tetrad and NAD(P)-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 317

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	314
PLN00016	378	RNA-binding protein; Provisional	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	100.0
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	100.0
PRK05865	854	hypothetical protein; Provisional	99.98
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.97
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.97
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.97
PLN02686	367	cinnamoyl-CoA reductase	99.96
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.96
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.96
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.96
PRK07201	657	short chain dehydrogenase; Provisional	99.96
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.96
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.95
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.95
PLN02996	491	fatty acyl-CoA reductase	99.95
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.93
PLN02583	297	cinnamoyl-CoA reductase	99.93
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.93
PLN02778	298	3,5-epimerase/4-reductase	99.93
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.92
PRK12320	699	hypothetical protein; Provisional	99.92
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.92
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.9
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.88
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.88
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.88
PLN02503	605	fatty acyl-CoA reductase 2	99.87
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.87
PLN02260	668	probable rhamnose biosynthetic enzyme	99.87
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.82
PLN03209	576	translocon at the inner envelope of chloroplast su	99.82
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.78
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.78
PRK06482	276	short chain dehydrogenase; Provisional	99.77
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.75
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.75
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.75
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.75
PRK09135	249	pteridine reductase; Provisional	99.74
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.74
PRK07806	248	short chain dehydrogenase; Provisional	99.73
PRK07774	250	short chain dehydrogenase; Provisional	99.73
PRK08263	275	short chain dehydrogenase; Provisional	99.72
PRK07074	257	short chain dehydrogenase; Provisional	99.71
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.71
PRK05875	276	short chain dehydrogenase; Provisional	99.7
PRK07775	274	short chain dehydrogenase; Provisional	99.7
PRK07067	257	sorbitol dehydrogenase; Provisional	99.69
PRK12828	239	short chain dehydrogenase; Provisional	99.69
PRK06138	252	short chain dehydrogenase; Provisional	99.68
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.68
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
PRK12746	254	short chain dehydrogenase; Provisional	99.67
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.67
PRK07890	258	short chain dehydrogenase; Provisional	99.67
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.67
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.66
PRK06914	280	short chain dehydrogenase; Provisional	99.66
PRK06182	273	short chain dehydrogenase; Validated	99.66
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.66
PRK06180	277	short chain dehydrogenase; Provisional	99.66
PRK06128	300	oxidoreductase; Provisional	99.66
KOG2774	366	consensus NAD dependent epimerase [General functio	99.65
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.65
PRK06123	248	short chain dehydrogenase; Provisional	99.65
PRK05876	275	short chain dehydrogenase; Provisional	99.65
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.64
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.64
COG2910	211	Putative NADH-flavin reductase [General function p	99.64
PRK12829	264	short chain dehydrogenase; Provisional	99.64
PRK06701	290	short chain dehydrogenase; Provisional	99.64
PRK06194	287	hypothetical protein; Provisional	99.64
PRK12939	250	short chain dehydrogenase; Provisional	99.64
PRK07060	245	short chain dehydrogenase; Provisional	99.63
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.62
PRK12827	249	short chain dehydrogenase; Provisional	99.62
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.62
PRK09186	256	flagellin modification protein A; Provisional	99.62
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.62
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.62
PRK08219	227	short chain dehydrogenase; Provisional	99.61
PRK07577	234	short chain dehydrogenase; Provisional	99.61
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.61
PRK08324	681	short chain dehydrogenase; Validated	99.61
PRK08628	258	short chain dehydrogenase; Provisional	99.61
PRK12937	245	short chain dehydrogenase; Provisional	99.61
PRK05993	277	short chain dehydrogenase; Provisional	99.6
PRK06181	263	short chain dehydrogenase; Provisional	99.6
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.6
PRK06523	260	short chain dehydrogenase; Provisional	99.59
PRK06841	255	short chain dehydrogenase; Provisional	99.59
PRK06179	270	short chain dehydrogenase; Provisional	99.59
PRK07041	230	short chain dehydrogenase; Provisional	99.59
PLN02253	280	xanthoxin dehydrogenase	99.58
PRK08643	256	acetoin reductase; Validated	99.58
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.58
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.58
PRK06114	254	short chain dehydrogenase; Provisional	99.57
PRK06500	249	short chain dehydrogenase; Provisional	99.57
PRK07069	251	short chain dehydrogenase; Validated	99.57
PRK05717	255	oxidoreductase; Validated	99.57
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.56
PRK09134	258	short chain dehydrogenase; Provisional	99.56
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.56
PRK07985	294	oxidoreductase; Provisional	99.56
PRK06398	258	aldose dehydrogenase; Validated	99.55
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.55
PRK09291	257	short chain dehydrogenase; Provisional	99.55
PRK12744	257	short chain dehydrogenase; Provisional	99.55
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.55
PRK06949	258	short chain dehydrogenase; Provisional	99.54
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.54
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.54
PRK07063	260	short chain dehydrogenase; Provisional	99.54
PRK07825	273	short chain dehydrogenase; Provisional	99.54
PRK10538	248	malonic semialdehyde reductase; Provisional	99.54
PRK07326	237	short chain dehydrogenase; Provisional	99.54
PRK07478	254	short chain dehydrogenase; Provisional	99.53
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.53
PRK05650	270	short chain dehydrogenase; Provisional	99.53
PRK08339	263	short chain dehydrogenase; Provisional	99.53
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.53
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.53
PRK08017	256	oxidoreductase; Provisional	99.52
PRK12747	252	short chain dehydrogenase; Provisional	99.52
PRK07814	263	short chain dehydrogenase; Provisional	99.52
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.52
PRK12743	256	oxidoreductase; Provisional	99.52
PRK07109	334	short chain dehydrogenase; Provisional	99.52
PRK07856	252	short chain dehydrogenase; Provisional	99.52
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.52
PRK07454	241	short chain dehydrogenase; Provisional	99.52
PRK05867	253	short chain dehydrogenase; Provisional	99.51
PRK06172	253	short chain dehydrogenase; Provisional	99.51
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.51
PRK09242	257	tropinone reductase; Provisional	99.51
PRK08265	261	short chain dehydrogenase; Provisional	99.51
PRK06196	315	oxidoreductase; Provisional	99.51
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.51
PRK07576	264	short chain dehydrogenase; Provisional	99.51
PRK06057	255	short chain dehydrogenase; Provisional	99.51
PRK06198	260	short chain dehydrogenase; Provisional	99.5
PRK08264	238	short chain dehydrogenase; Validated	99.5
PRK07024	257	short chain dehydrogenase; Provisional	99.5
PRK07677	252	short chain dehydrogenase; Provisional	99.5
PRK06483	236	dihydromonapterin reductase; Provisional	99.5
PRK07035	252	short chain dehydrogenase; Provisional	99.49
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.49
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.49
PRK06101	240	short chain dehydrogenase; Provisional	99.49
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.49
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.49
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.49
PRK08589	272	short chain dehydrogenase; Validated	99.48
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.48
PRK05693	274	short chain dehydrogenase; Provisional	99.48
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.47
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.47
PRK08226	263	short chain dehydrogenase; Provisional	99.47
PRK07062	265	short chain dehydrogenase; Provisional	99.46
PRK12742	237	oxidoreductase; Provisional	99.46
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.45
PRK07904	253	short chain dehydrogenase; Provisional	99.45
PRK07831	262	short chain dehydrogenase; Provisional	99.45
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.44
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.44
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.43
PRK05866	293	short chain dehydrogenase; Provisional	99.43
PRK08267	260	short chain dehydrogenase; Provisional	99.43
PRK07102	243	short chain dehydrogenase; Provisional	99.42
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.42
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.42
PRK06139	330	short chain dehydrogenase; Provisional	99.41
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.41
PRK06924	251	short chain dehydrogenase; Provisional	99.41
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.41
PRK05872	296	short chain dehydrogenase; Provisional	99.4
PRK08251	248	short chain dehydrogenase; Provisional	99.4
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.4
PRK08278	273	short chain dehydrogenase; Provisional	99.4
PRK06484	520	short chain dehydrogenase; Validated	99.38
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.38
PRK07023	243	short chain dehydrogenase; Provisional	99.37
PRK05884	223	short chain dehydrogenase; Provisional	99.36
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.36
PRK09072	263	short chain dehydrogenase; Provisional	99.34
PRK08177	225	short chain dehydrogenase; Provisional	99.34
PRK06940	275	short chain dehydrogenase; Provisional	99.34
PRK05855	582	short chain dehydrogenase; Validated	99.34
PRK07201	657	short chain dehydrogenase; Provisional	99.33
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.33
PRK07832	272	short chain dehydrogenase; Provisional	99.33
PRK06125	259	short chain dehydrogenase; Provisional	99.32
PRK06197	306	short chain dehydrogenase; Provisional	99.32
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.32
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.32
PRK07578	199	short chain dehydrogenase; Provisional	99.31
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.31
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.31
PRK06953	222	short chain dehydrogenase; Provisional	99.31
PRK07791	286	short chain dehydrogenase; Provisional	99.3
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.29
PRK08703	239	short chain dehydrogenase; Provisional	99.29
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.29
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.28
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.28
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.27
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.27
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.27
PRK05854	313	short chain dehydrogenase; Provisional	99.25
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.24
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.24
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.24
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.23
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.23
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.23
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.22
PRK12367	245	short chain dehydrogenase; Provisional	99.21
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.2
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.2
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.19
PLN00015	308	protochlorophyllide reductase	99.18
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.17
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.17
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.17
PRK05599	246	hypothetical protein; Provisional	99.16
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.16
PRK06484	520	short chain dehydrogenase; Validated	99.15
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.14
PLN02780	320	ketoreductase/ oxidoreductase	99.14
PRK08862	227	short chain dehydrogenase; Provisional	99.12
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.12
KOG0725	270	consensus Reductases with broad range of substrate	99.11
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.07
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.06
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.06
PRK08303	305	short chain dehydrogenase; Provisional	99.05
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	98.96
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	98.9
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.86
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	98.86
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	98.83
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	98.8
KOG1208	314	consensus Dehydrogenases with different specificit	98.76
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	98.74
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	98.72
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	98.67
KOG1611	249	consensus Predicted short chain-type dehydrogenase	98.67
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	98.55
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	98.51
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.5
PF13950	62	Epimerase_Csub: UDP-glucose 4-epimerase C-term sub	98.45
COG1028	251	FabG Dehydrogenases with different specificities (	98.42
PRK08309	177	short chain dehydrogenase; Provisional	98.41
PRK06720	169	hypothetical protein; Provisional	98.31
PRK09620	229	hypothetical protein; Provisional	98.29
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.15
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.14
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.06
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	97.98
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.91
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.9
PTZ00325	321	malate dehydrogenase; Provisional	97.83
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.59
PLN00106	323	malate dehydrogenase	97.58
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.56
COG3268	382	Uncharacterized conserved protein [Function unknow	97.44
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	97.41
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.41
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.41
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.35
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	97.17
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.08
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	96.81
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.7
PRK14982	340	acyl-ACP reductase; Provisional	96.65
PRK12548	289	shikimate 5-dehydrogenase; Provisional	96.58
PRK05086	312	malate dehydrogenase; Provisional	96.39
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	96.38
PRK04148	134	hypothetical protein; Provisional	96.36
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.21
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.2
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.15
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.15
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	96.1
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	96.04
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	96.03
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	95.93
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	95.86
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.83
PRK09496	453	trkA potassium transporter peripheral membrane com	95.76
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.66
PRK00048	257	dihydrodipicolinate reductase; Provisional	95.42
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.36
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	95.27
PRK10669	558	putative cation:proton antiport protein; Provision	95.25
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.15
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.11
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	95.09
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	95.07
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	95.03
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.02
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.01
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.0
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.96
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	94.94
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	94.9
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	94.9
PRK09496	453	trkA potassium transporter peripheral membrane com	94.87
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	94.86
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	94.78
PRK08306	296	dipicolinate synthase subunit A; Reviewed	94.61
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	94.5
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	94.48
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	94.47
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	94.44
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	94.37
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	94.29
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.24
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.23
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	94.2
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	94.18
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.16
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	94.07
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	94.07
COG2130	340	Putative NADP-dependent oxidoreductases [General f	94.05
PRK03659	601	glutathione-regulated potassium-efflux system prot	94.02
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	94.02
PLN02494	477	adenosylhomocysteinase	94.0
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	93.94
PRK06436	303	glycerate dehydrogenase; Provisional	93.92
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	93.75
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	93.71
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	93.7
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	93.7
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	93.66
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	93.64
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	93.55
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	93.52
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	93.49
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	93.46
PTZ00075	476	Adenosylhomocysteinase; Provisional	93.44
PRK08328	231	hypothetical protein; Provisional	93.41
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	93.41
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	93.36
PRK15116	268	sulfur acceptor protein CsdL; Provisional	93.35
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	93.25
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	93.13
PRK08655	437	prephenate dehydrogenase; Provisional	93.12
PLN02383	344	aspartate semialdehyde dehydrogenase	93.12
PRK12480	330	D-lactate dehydrogenase; Provisional	93.11
PRK08223	287	hypothetical protein; Validated	93.07
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	92.98
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	92.96
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	92.95
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	92.93
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	92.9
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	92.89
PLN02928	347	oxidoreductase family protein	92.86
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	92.81
PRK06487	317	glycerate dehydrogenase; Provisional	92.68
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	92.64
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	92.61
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	92.61
TIGR01692	288	HIBADH 3-hydroxyisobutyrate dehydrogenase. This en	92.53
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	92.51
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	92.49
PLN02586	360	probable cinnamyl alcohol dehydrogenase	92.48
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	92.37
PRK13243	333	glyoxylate reductase; Reviewed	92.37
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	92.34
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	92.3
COG1255	129	Uncharacterized protein conserved in archaea [Func	92.29
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	92.28
PRK07574	385	formate dehydrogenase; Provisional	92.26
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	92.11
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	92.1
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	92.06
PF03447	117	NAD_binding_3: Homoserine dehydrogenase, NAD bindi	92.02
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	91.98
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	91.9
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	91.9
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	91.88
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	91.87
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	91.86
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	91.84
PRK10537	393	voltage-gated potassium channel; Provisional	91.78
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	91.76
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	91.72
TIGR01161	352	purK phosphoribosylaminoimidazole carboxylase, Pur	91.69
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	91.64
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	91.61
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	91.6
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	91.6
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	91.56
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	91.55
PRK03562	621	glutathione-regulated potassium-efflux system prot	91.51
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	91.45
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	91.38
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	91.27
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	91.24
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.23
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	91.21
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	91.15
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	91.14
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	91.03
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	91.03
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	91.0
PRK13403	335	ketol-acid reductoisomerase; Provisional	90.96
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	90.95
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	90.91
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	90.91
TIGR00514	449	accC acetyl-CoA carboxylase, biotin carboxylase su	90.8
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	90.79
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	90.77
KOG4288	283	consensus Predicted oxidoreductase [General functi	90.75
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.65
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	90.64
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	90.61
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	90.61
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	90.61
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	90.55
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	90.51
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	90.49
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	90.45
TIGR00877	423	purD phosphoribosylamine--glycine ligase. This enz	90.39
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	90.36
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	90.28
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	90.28
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	90.28
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	90.22
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	90.22
PRK06849	389	hypothetical protein; Provisional	90.22
PRK08462	445	biotin carboxylase; Validated	90.21
PRK06932	314	glycerate dehydrogenase; Provisional	90.21
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	90.1
KOG0409	327	consensus Predicted dehydrogenase [General functio	90.07
PLN03139	386	formate dehydrogenase; Provisional	89.96
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	89.96
PRK07411	390	hypothetical protein; Validated	89.93
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	89.91
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	89.83
PLN02178	375	cinnamyl-alcohol dehydrogenase	89.8
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	89.71
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	89.57
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	89.56
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	89.52
PRK05442	326	malate dehydrogenase; Provisional	89.51
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	89.41
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	89.4
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	89.4
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	89.4
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.38
PRK08591	451	acetyl-CoA carboxylase biotin carboxylase subunit;	89.37
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	89.12
TIGR00873	467	gnd 6-phosphogluconate dehydrogenase, decarboxylat	89.07
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	89.06
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	89.0

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=1.2e-43  Score=314.58  Aligned_cols=307  Identities=61%  Similarity=1.013  Sum_probs=247.9

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||||+|++|++.|+++||+|++++|+..... .+.......+.+. ..+++++.+|+.|   +..++...++|+|||++
T Consensus        63 GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~-~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~~~~~d~Vi~~~  138 (378)
T PLN00016         63 GGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQ-KMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVAGAGFDVVYDNN  138 (378)
T ss_pred             CCceeEhHHHHHHHHHCCCEEEEEecCCcchh-hhccCchhhhhHhhhcCceEEEecHHH---HHhhhccCCccEEEeCC
Confidence            99999999999999999999999999875421 1111100011111 1368899999977   44555444899999999


Q ss_pred             CCCcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCc----cccchhhHHHHHHhcCCceEEEecCeeeCCCCCC
Q 021331           81 GREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCES----RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYN  154 (314)
Q Consensus        81 ~~~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~----~~~~k~~~e~~~~~~~~~~~ilR~~~v~g~~~~~  154 (314)
                      +.....+++++++|.  ++++|||+||.++|+.....|..|.    ...+|..+|.++++.+++++++||+.+|||+...
T Consensus       139 ~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~sK~~~E~~l~~~~l~~~ilRp~~vyG~~~~~  218 (378)
T PLN00016        139 GKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKAGHLEVEAYLQKLGVNWTSFRPQYIYGPGNNK  218 (378)
T ss_pred             CCCHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcchHHHHHHHHHHcCCCeEEEeceeEECCCCCC
Confidence            988888999999997  8899999999999986554444331    1127999999999999999999999999997665


Q ss_pred             chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCccccHHHHHHHHHHHhCCCCCee
Q 021331          155 PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPEL  234 (314)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~  234 (314)
                      .+..+++..+..+.++.+++++.+.++++|++|+|++++.++.++...+++||+++++.+|+.|+++.+.+.+|.+. .+
T Consensus       219 ~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~-~i  297 (378)
T PLN00016        219 DCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPE-EI  297 (378)
T ss_pred             chHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCC-ce
Confidence            56667777888888888888889999999999999999999988655678999999999999999999999999876 55


Q ss_pred             eecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHhhhhcCCCccCCCCCchhhhhhhcccccc
Q 021331          235 VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADFSTDDMILGKKLVLQ  313 (314)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (314)
                      ...++..+.++.....+.....+..|++|++++|||.|+++++++|+++++|+..++.++++.+|..+|+|+++..+..
T Consensus       298 ~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~~~LGw~p~~~l~egl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (378)
T PLN00016        298 VHYDPKAVGFGAKKAFPFRDQHFFASPRKAKEELGWTPKFDLVEDLKDRYELYFGRGRDRKEADFETDDKILEKLGVPV  376 (378)
T ss_pred             eecCccccCccccccccccccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCCccccCccccHHHHHHhcCCC
Confidence            5555554444433333444556678999999999999999999999999999999999999999999999999886654

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=4.5e-43  Score=282.55  Aligned_cols=276  Identities=22%  Similarity=0.306  Sum_probs=230.5

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcc-cccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      |||+||||++++++++++.  .+|+.++.-.-. ....+.+     + ...++..|+++|+.|.+.+.+++++..+|+|+
T Consensus         6 TGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~-----~-~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vv   79 (340)
T COG1088           6 TGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLAD-----V-EDSPRYRFVQGDICDRELVDRLFKEYQPDAVV   79 (340)
T ss_pred             ecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHh-----h-hcCCCceEEeccccCHHHHHHHHHhcCCCeEE
Confidence            7999999999999999985  457777743211 1111110     0 01368999999999999999999988899999


Q ss_pred             EcCCC----------------CcccHHHHHHhCC--CC-CcEEEEeeceeeccCCC--------CCccC--ccccchhhH
Q 021331           78 DINGR----------------EADEVEPILDALP--NL-EQFIYCSSAGVYLKSDL--------LPHCE--SRHKGKLNT  128 (314)
Q Consensus        78 ~~a~~----------------~~~~~~~~~~~~~--~~-~~~i~~Ss~~v~~~~~~--------~~~~e--~~~~~k~~~  128 (314)
                      |+|+.                |+.+|.++|++++  .. -||+++||..|||+-..        .|+.+  +|.++|+.+
T Consensus        80 hfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAas  159 (340)
T COG1088          80 HFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAAS  159 (340)
T ss_pred             EechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhH
Confidence            99986                5678999999998  33 49999999999986432        23333  799999888


Q ss_pred             HHHHH----hcCCceEEEecCeeeCCCCC-CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCC
Q 021331          129 ESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  203 (314)
Q Consensus       129 e~~~~----~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~  203 (314)
                      ..+++    .+|++++|.|+++-|||.++ ..+++.++..++.+++++++|+|.+.++|+|++|-|+++-.++.+.. .|
T Consensus       160 D~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~-~G  238 (340)
T COG1088         160 DLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGK-IG  238 (340)
T ss_pred             HHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCc-CC
Confidence            77765    57999999999999999875 67899999999999999999999999999999999999999999987 49


Q ss_pred             ceEEecCCccccHHHHHHHHHHHhCCCCCe----eeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHH
Q 021331          204 QVFNISGEKYVTFDGLARACAKAAGFPEPE----LVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEG  279 (314)
Q Consensus       204 ~~~~i~~~~~~s~~el~~~i~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~  279 (314)
                      ++|||+++...+-.|+++.|++.+|+..+.    +..+.          -+|.-..++.+|.+|+.++|||.|+++|+++
T Consensus       239 E~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~----------DRpGHD~RYaid~~Ki~~eLgW~P~~~fe~G  308 (340)
T COG1088         239 ETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVE----------DRPGHDRRYAIDASKIKRELGWRPQETFETG  308 (340)
T ss_pred             ceEEeCCCccchHHHHHHHHHHHhCccccchhhheEecc----------CCCCCccceeechHHHhhhcCCCcCCCHHHH
Confidence            999999999999999999999999987643    33332          2567778999999999999999999999999


Q ss_pred             HHHHHhhhhcCCCc
Q 021331          280 LADSYNLDFGRGTY  293 (314)
Q Consensus       280 l~~~~~~~~~~~~~  293 (314)
                      |+++++||.++.+|
T Consensus       309 lrkTv~WY~~N~~W  322 (340)
T COG1088         309 LRKTVDWYLDNEWW  322 (340)
T ss_pred             HHHHHHHHHhchHH
Confidence            99999999996544

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3.5e-41  Score=273.02  Aligned_cols=267  Identities=23%  Similarity=0.303  Sum_probs=222.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCc-eEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      |||+||||++.+.+|++.|++|++++.-.......+.           .. .+++++|+.|.+.+.+.|.+.++|+|||+
T Consensus         6 tGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~-----------~~~~~f~~gDi~D~~~L~~vf~~~~idaViHF   74 (329)
T COG1087           6 TGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALL-----------KLQFKFYEGDLLDRALLTAVFEENKIDAVVHF   74 (329)
T ss_pred             ecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhh-----------hccCceEEeccccHHHHHHHHHhcCCCEEEEC
Confidence            7999999999999999999999999976655333332           22 68999999999999999999999999999


Q ss_pred             CCC----------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHH
Q 021331           80 NGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLE  133 (314)
Q Consensus        80 a~~----------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~  133 (314)
                      |+.                |+.++.+++++|.  ++++|||.||+.+||.+...|+.|        +|+++|++.|++++
T Consensus        75 Aa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~  154 (329)
T COG1087          75 AASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILR  154 (329)
T ss_pred             ccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHH
Confidence            986                5667999999998  999999999999999998888888        89999999999985


Q ss_pred             ----hcCCceEEEecCeeeCCCC----------CCchhHHHHHHHHcCCC-eecCCC------CCceeeeeeHHHHHHHH
Q 021331          134 ----SKGVNWTSLRPVYIYGPLN----------YNPVEEWFFHRLKAGRP-IPIPGS------GIQVTQLGHVKDLARAF  192 (314)
Q Consensus       134 ----~~~~~~~ilR~~~v~g~~~----------~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~i~~~D~a~~~  192 (314)
                          .+++++++||.+++.|...          ...+++..++.+...++ +.++|+      |.-.||+||+.|+|++-
T Consensus       155 d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH  234 (329)
T COG1087         155 DAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAH  234 (329)
T ss_pred             HHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHH
Confidence                4689999999999998531          12345555555554444 666654      45589999999999999


Q ss_pred             HHHhcCCc--cCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCC
Q 021331          193 VQVLGNEK--ASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGW  270 (314)
Q Consensus       193 ~~~l~~~~--~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~  270 (314)
                      +.+++.-.  ....+||+++|...|..|+++.++++.|++. .+...+          .++.+...++.|++|++++|||
T Consensus       235 ~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~i-p~~~~~----------RR~GDpa~l~Ad~~kA~~~Lgw  303 (329)
T COG1087         235 VLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDI-PVEIAP----------RRAGDPAILVADSSKARQILGW  303 (329)
T ss_pred             HHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcC-ceeeCC----------CCCCCCceeEeCHHHHHHHhCC
Confidence            99887522  1236999999999999999999999999876 333222          2567788999999999999999


Q ss_pred             Cccc-ChHHHHHHHHhhhhc
Q 021331          271 KPEF-DLVEGLADSYNLDFG  289 (314)
Q Consensus       271 ~~~~-~~~~~l~~~~~~~~~  289 (314)
                      +|++ ++++.+++...|...
T Consensus       304 ~p~~~~L~~ii~~aw~W~~~  323 (329)
T COG1087         304 QPTYDDLEDIIKDAWDWHQQ  323 (329)
T ss_pred             CcccCCHHHHHHHHHHHhhh
Confidence            9999 899999999888764

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=6.9e-41  Score=293.94  Aligned_cols=283  Identities=19%  Similarity=0.219  Sum_probs=214.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||+|++|+++|+++|++|++++|........+.......-.....++.++.+|+.|.+.+.++++  ++|+|||+|
T Consensus        21 tGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--~~d~ViHlA   98 (348)
T PRK15181         21 TGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--NVDYVLHQA   98 (348)
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh--CCCEEEECc
Confidence            799999999999999999999999998654321111100000000001468899999999999999998  899999999


Q ss_pred             CC----------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHH-
Q 021331           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLE-  133 (314)
Q Consensus        81 ~~----------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~-  133 (314)
                      +.                |..++.+++++|+  ++++|||+||..+||.....+..|        .|+.+|..+|.+++ 
T Consensus        99 a~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~  178 (348)
T PRK15181         99 ALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADV  178 (348)
T ss_pred             cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHH
Confidence            74                2345789999988  788999999999998543322211        69999999999864 


Q ss_pred             ---hcCCceEEEecCeeeCCCCC-----CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cCC
Q 021331          134 ---SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASR  203 (314)
Q Consensus       134 ---~~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~~  203 (314)
                         +++++++++||+.+|||++.     ..+++.++.++..++++.+++++.+.++++|++|+|++++.++..+.  ..+
T Consensus       179 ~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~  258 (348)
T PRK15181        179 FARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258 (348)
T ss_pred             HHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCC
Confidence               45899999999999999753     23567788888888888888999999999999999999988776432  256


Q ss_pred             ceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHH
Q 021331          204 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADS  283 (314)
Q Consensus       204 ~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~  283 (314)
                      ++||+++++.+|++|+++.+.+.++..........   ....  ...+.......+|++|++++|||.|+++++++|+++
T Consensus       259 ~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~d~~k~~~~lGw~P~~sl~egl~~~  333 (348)
T PRK15181        259 KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAE---PIYK--DFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQT  333 (348)
T ss_pred             CEEEecCCCcEeHHHHHHHHHHHhCcccccccCCC---cccC--CCCCCcccccccCHHHHHHHhCCCCCCCHHHHHHHH
Confidence            89999999999999999999999984321100000   0001  112222345678999999999999999999999999


Q ss_pred             HhhhhcC
Q 021331          284 YNLDFGR  290 (314)
Q Consensus       284 ~~~~~~~  290 (314)
                      ++|+..+
T Consensus       334 ~~w~~~~  340 (348)
T PRK15181        334 LKWYIDK  340 (348)
T ss_pred             HHHHHHh
Confidence            9998764

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=5.7e-38  Score=279.46  Aligned_cols=279  Identities=21%  Similarity=0.241  Sum_probs=208.7

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      ||||||||++|++.|+++ |++|++++|+............    .....+++++.+|++|.+.+.++++  ++|+|||+
T Consensus        20 TGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~----~~~~~~~~~~~~Dl~d~~~l~~~~~--~~d~ViHl   93 (386)
T PLN02427         20 IGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDT----VPWSGRIQFHRINIKHDSRLEGLIK--MADLTINL   93 (386)
T ss_pred             ECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcccc----ccCCCCeEEEEcCCCChHHHHHHhh--cCCEEEEc
Confidence            799999999999999998 5999999987654221111000    0012469999999999999999998  89999999


Q ss_pred             CCCC----------------cccHHHHHHhCC-CCCcEEEEeeceeeccCCC------CCcc------------------
Q 021331           80 NGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDL------LPHC------------------  118 (314)
Q Consensus        80 a~~~----------------~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~------~~~~------------------  118 (314)
                      |+..                ..++.+++++|. ..++|||+||..+||....      .|..                  
T Consensus        94 Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~  173 (386)
T PLN02427         94 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFG  173 (386)
T ss_pred             ccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccccC
Confidence            9741                224667888876 4489999999999985311      1110                  


Q ss_pred             ------CccccchhhHHHHHHh----cCCceEEEecCeeeCCCCC------------CchhHHHHHHHHcCCCeecCCCC
Q 021331          119 ------ESRHKGKLNTESVLES----KGVNWTSLRPVYIYGPLNY------------NPVEEWFFHRLKAGRPIPIPGSG  176 (314)
Q Consensus       119 ------e~~~~~k~~~e~~~~~----~~~~~~ilR~~~v~g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~  176 (314)
                            ..|+.+|..+|+++..    ++++++++||+.||||+..            ..++..++..+..++++.+++++
T Consensus       174 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g  253 (386)
T PLN02427        174 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGG  253 (386)
T ss_pred             CCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCC
Confidence                  1489999999999854    5899999999999999742            12344556667778888887888


Q ss_pred             CceeeeeeHHHHHHHHHHHhcCCc-cCCceEEecCC-ccccHHHHHHHHHHHhCCCCCe----e--eecCCcccccCCCC
Q 021331          177 IQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGE-KYVTFDGLARACAKAAGFPEPE----L--VHYNPKEFDFGKKK  248 (314)
Q Consensus       177 ~~~~~~i~~~D~a~~~~~~l~~~~-~~~~~~~i~~~-~~~s~~el~~~i~~~~g~~~~~----~--~~~~~~~~~~~~~~  248 (314)
                      .+.++|+|++|+|++++.+++++. ..+++||++++ +.+|+.|+++.+.+.+|.....    .  ...+...+    ..
T Consensus       254 ~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~----~~  329 (386)
T PLN02427        254 QSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSKEF----YG  329 (386)
T ss_pred             CceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCcccc----cC
Confidence            889999999999999999998753 35789999997 5899999999999999852100    0  11111000    00


Q ss_pred             cccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHhhhhc
Q 021331          249 AFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFG  289 (314)
Q Consensus       249 ~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~~~~  289 (314)
                      ...........|.+|++++|||.|+++++++|+++++|+..
T Consensus       330 ~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~  370 (386)
T PLN02427        330 EGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHK  370 (386)
T ss_pred             ccccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHH
Confidence            01122355567999999999999999999999999999776

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.5e-37  Score=248.59  Aligned_cols=279  Identities=24%  Similarity=0.326  Sum_probs=224.0

Q ss_pred             CCcccccHHHHHHHHHHC--CCeEEEEEcCC-cccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGK-APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      |||.||+|++.+..+...  .++.+.++.-. ......+..      ....++.+++.+|+.+...+...+....+|.|+
T Consensus        12 tgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~------~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vi   85 (331)
T KOG0747|consen   12 TGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEP------VRNSPNYKFVEGDIADADLVLYLFETEEIDTVI   85 (331)
T ss_pred             ecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhh------hccCCCceEeeccccchHHHHhhhccCchhhhh
Confidence            799999999999999988  36666655321 110111110      112478999999999999999999888999999


Q ss_pred             EcCCC----------------CcccHHHHHHhCC---CCCcEEEEeeceeeccCCCCCcc-C--------ccccchhhHH
Q 021331           78 DINGR----------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC-E--------SRHKGKLNTE  129 (314)
Q Consensus        78 ~~a~~----------------~~~~~~~~~~~~~---~~~~~i~~Ss~~v~~~~~~~~~~-e--------~~~~~k~~~e  129 (314)
                      |+|+.                |+-++..+++++.   ++++|||+||..|||+....... |        +|+++|+.+|
T Consensus        86 hfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE  165 (331)
T KOG0747|consen   86 HFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAE  165 (331)
T ss_pred             hhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHH
Confidence            99876                3456888999987   78999999999999976543222 2        7999999999


Q ss_pred             HHHH----hcCCceEEEecCeeeCCCCC-CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCc
Q 021331          130 SVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  204 (314)
Q Consensus       130 ~~~~----~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~  204 (314)
                      ..++    +++++++++|.++||||++. ...++.++.....+++.++.|++.+.++|+|++|+++++..++.+.. .|+
T Consensus       166 ~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~-~ge  244 (331)
T KOG0747|consen  166 MLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGE-LGE  244 (331)
T ss_pred             HHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCC-ccc
Confidence            9986    46899999999999999875 45788888888888999999999999999999999999999999844 799


Q ss_pred             eEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHH
Q 021331          205 VFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSY  284 (314)
Q Consensus       205 ~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~  284 (314)
                      +|||++...++..|+++.+.+.+.+..++.. .++..   .....+|....++.++++|++ .|||+|++|+++||+.++
T Consensus       245 IYNIgtd~e~~~~~l~k~i~eli~~~~~~~~-~~p~~---~~v~dRp~nd~Ry~~~~eKik-~LGw~~~~p~~eGLrkti  319 (331)
T KOG0747|consen  245 IYNIGTDDEMRVIDLAKDICELFEKRLPNID-TEPFI---FFVEDRPYNDLRYFLDDEKIK-KLGWRPTTPWEEGLRKTI  319 (331)
T ss_pred             eeeccCcchhhHHHHHHHHHHHHHHhccCCC-CCCcc---eecCCCCcccccccccHHHHH-hcCCcccCcHHHHHHHHH
Confidence            9999999999999999999999987543221 11111   112235666778999999999 699999999999999999


Q ss_pred             hhhhcCC
Q 021331          285 NLDFGRG  291 (314)
Q Consensus       285 ~~~~~~~  291 (314)
                      +||.++-
T Consensus       320 e~y~~~~  326 (331)
T KOG0747|consen  320 EWYTKNF  326 (331)
T ss_pred             HHHHhhh
Confidence            9988753

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=1.1e-36  Score=268.67  Aligned_cols=286  Identities=19%  Similarity=0.219  Sum_probs=211.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||+++++.|+++|++|+++.++..........   .... ...++.++.+|++|++.+.++++..++|+|||+|
T Consensus         7 tGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A   82 (355)
T PRK10217          7 TGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSL---APVA-QSERFAFEKVDICDRAELARVFTEHQPDCVMHLA   82 (355)
T ss_pred             EcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhh---hhcc-cCCceEEEECCCcChHHHHHHHhhcCCCEEEECC
Confidence            79999999999999999998765544332211110000   0000 0135788999999999999999865699999999


Q ss_pred             CCC----------------cccHHHHHHhCC-----------CCCcEEEEeeceeeccCCC--CCccC--------cccc
Q 021331           81 GRE----------------ADEVEPILDALP-----------NLEQFIYCSSAGVYLKSDL--LPHCE--------SRHK  123 (314)
Q Consensus        81 ~~~----------------~~~~~~~~~~~~-----------~~~~~i~~Ss~~v~~~~~~--~~~~e--------~~~~  123 (314)
                      +..                ..++.+++++|.           ++++||++||..+|+....  .+.+|        .|+.
T Consensus        83 ~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~  162 (355)
T PRK10217         83 AESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSA  162 (355)
T ss_pred             cccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhHH
Confidence            752                344677888763           3569999999999984321  11221        6999


Q ss_pred             chhhHHHHHH----hcCCceEEEecCeeeCCCCC-CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          124 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       124 ~k~~~e~~~~----~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      +|..+|.+++    +++++++++||+.+|||+.. ..++..++.....+.++++++++++.++|+|++|+|+++..++..
T Consensus       163 sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~  242 (355)
T PRK10217        163 SKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT  242 (355)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhc
Confidence            9999988874    46899999999999999863 346677777777777777788999999999999999999999987


Q ss_pred             CccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccc--cCCCCcccCCCcceeecHHhHHhhcCCCcccCh
Q 021331          199 EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFD--FGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDL  276 (314)
Q Consensus       199 ~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~  276 (314)
                      +. .+++||+++++++|+.|+++.+.+.+|...+.. +.+...+.  ......++.....+..|++|++++|||.|++++
T Consensus       243 ~~-~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~l  320 (355)
T PRK10217        243 GK-VGETYNIGGHNERKNLDVVETICELLEELAPNK-PQGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQETF  320 (355)
T ss_pred             CC-CCCeEEeCCCCcccHHHHHHHHHHHhccccccc-ccccccccccceecCCCCCCCcccccCHHHHHHhcCCCCcCcH
Confidence            54 568999999999999999999999998643211 11000000  000111222334567899999999999999999


Q ss_pred             HHHHHHHHhhhhcCCC
Q 021331          277 VEGLADSYNLDFGRGT  292 (314)
Q Consensus       277 ~~~l~~~~~~~~~~~~  292 (314)
                      +++|+++++|+..+..
T Consensus       321 ~e~l~~~~~~~~~~~~  336 (355)
T PRK10217        321 ESGMRKTVQWYLANES  336 (355)
T ss_pred             HHHHHHHHHHHHhCHH
Confidence            9999999999988754

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=9.8e-37  Score=267.96  Aligned_cols=277  Identities=18%  Similarity=0.252  Sum_probs=208.8

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCC-ChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-d~~~l~~~~~~~~~d~vi~   78 (314)
                      ||||||+|++|++.|++. |++|++++|+.........          ..+++++.+|+. +.+.+.++++  ++|+|||
T Consensus         7 tGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~--~~d~ViH   74 (347)
T PRK11908          7 LGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVN----------HPRMHFFEGDITINKEWIEYHVK--KCDVILP   74 (347)
T ss_pred             ECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhcc----------CCCeEEEeCCCCCCHHHHHHHHc--CCCEEEE
Confidence            799999999999999987 6999999987543221111          146899999997 6778888888  8999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC-CCCcEEEEeeceeeccCCCCCcc------------C---ccccchh
Q 021331           79 INGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHC------------E---SRHKGKL  126 (314)
Q Consensus        79 ~a~~~----------------~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~------------e---~~~~~k~  126 (314)
                      +|+..                ..++.+++++|. ..++|||+||..+||.....++.            .   .|+.+|.
T Consensus        75 ~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~  154 (347)
T PRK11908         75 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQ  154 (347)
T ss_pred             CcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHH
Confidence            98742                234678899887 34799999999999853221111            1   5899999


Q ss_pred             hHHHHHH----hcCCceEEEecCeeeCCCCC---------CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHH
Q 021331          127 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  193 (314)
Q Consensus       127 ~~e~~~~----~~~~~~~ilR~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  193 (314)
                      .+|++++    +++++++++||+.+|||+..         ..++..++..+..+.++.+++++++.++|+|++|++++++
T Consensus       155 ~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~  234 (347)
T PRK11908        155 LMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALM  234 (347)
T ss_pred             HHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHH
Confidence            9999885    46899999999999999742         2356677788888888888788889999999999999999


Q ss_pred             HHhcCCc--cCCceEEecCC-ccccHHHHHHHHHHHhCCCCCeeee--cCCcccccC-C--CCcccCCCcceeecHHhHH
Q 021331          194 QVLGNEK--ASRQVFNISGE-KYVTFDGLARACAKAAGFPEPELVH--YNPKEFDFG-K--KKAFPFRDQHFFASVEKAK  265 (314)
Q Consensus       194 ~~l~~~~--~~~~~~~i~~~-~~~s~~el~~~i~~~~g~~~~~~~~--~~~~~~~~~-~--~~~~~~~~~~~~~~~~k~~  265 (314)
                      .++.++.  ..+++||++++ ..+|+.|+++.+.+.+|... .+..  .+....... .  .............|.+|++
T Consensus       235 ~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  313 (347)
T PRK11908        235 KIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYP-EYAESAKKVKLVETTSGAYYGKGYQDVQNRVPKIDNTM  313 (347)
T ss_pred             HHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcc-cccccccccccccCCchhccCcCcchhccccCChHHHH
Confidence            9998753  35789999987 47999999999999999532 2210  000000000 0  0001112234556889999


Q ss_pred             hhcCCCcccChHHHHHHHHhhhhcC
Q 021331          266 HVLGWKPEFDLVEGLADSYNLDFGR  290 (314)
Q Consensus       266 ~~lg~~~~~~~~~~l~~~~~~~~~~  290 (314)
                      ++|||.|+++++++++++++|++++
T Consensus       314 ~~lGw~p~~~l~~~l~~~~~~~~~~  338 (347)
T PRK11908        314 QELGWAPKTTMDDALRRIFEAYRGH  338 (347)
T ss_pred             HHcCCCCCCcHHHHHHHHHHHHHHH
Confidence            9999999999999999999998753

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=1.2e-36  Score=273.44  Aligned_cols=279  Identities=19%  Similarity=0.268  Sum_probs=206.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCccccc------CC-CC-CCchhhhh----ccCceEEEEecCCChhhHHHhh
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ------QL-PG-ESDQEFAE----FSSKILHLKGDRKDYDFVKSSL   68 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~-~~-~~~~~~~~----~~~~~~~~~~D~~d~~~l~~~~   68 (314)
                      |||+||||++|++.|+++|++|++++|.......      .. +. .....+..    ...+++++.+|++|++.+.+++
T Consensus        53 TGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~~v~~~l  132 (442)
T PLN02572         53 IGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFEFLSEAF  132 (442)
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHHHHHHHH
Confidence            7999999999999999999999998753221100      00 00 00001100    0136889999999999999999


Q ss_pred             hcCCccEEEEcCCC-------------------CcccHHHHHHhCC--CCC-cEEEEeeceeeccCCC------------
Q 021331           69 SAKGFDVVYDINGR-------------------EADEVEPILDALP--NLE-QFIYCSSAGVYLKSDL------------  114 (314)
Q Consensus        69 ~~~~~d~vi~~a~~-------------------~~~~~~~~~~~~~--~~~-~~i~~Ss~~v~~~~~~------------  114 (314)
                      +..++|+|||+|+.                   |+.++.+++++|.  +++ +||++||..+||....            
T Consensus       133 ~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~  212 (442)
T PLN02572        133 KSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNIDIEEGYITITHN  212 (442)
T ss_pred             HhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCCCCcccccccccc
Confidence            86679999999854                   2335778888887  664 8999999999985310            


Q ss_pred             -------CCcc--CccccchhhHHHHHH----hcCCceEEEecCeeeCCCCCC------------------chhHHHHHH
Q 021331          115 -------LPHC--ESRHKGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN------------------PVEEWFFHR  163 (314)
Q Consensus       115 -------~~~~--e~~~~~k~~~e~~~~----~~~~~~~ilR~~~v~g~~~~~------------------~~~~~~~~~  163 (314)
                             .|..  ..|+.+|..+|.+++    .++++++++||+.+|||++..                  .++..++.+
T Consensus       213 ~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~  292 (442)
T PLN02572        213 GRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQ  292 (442)
T ss_pred             cccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHH
Confidence                   0111  169999999998874    458999999999999997432                  244556667


Q ss_pred             HHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCC--ceEEecCCccccHHHHHHHHHHH---hCCCCCeeeecC
Q 021331          164 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR--QVFNISGEKYVTFDGLARACAKA---AGFPEPELVHYN  238 (314)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~--~~~~i~~~~~~s~~el~~~i~~~---~g~~~~~~~~~~  238 (314)
                      +..++++.++|++++.++|+|++|+|++++.+++++...+  ++||+++ +.+|+.|+++.+.+.   +|.+. .+...+
T Consensus       293 ~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~~~~g~~~-~~~~~p  370 (442)
T PLN02572        293 AAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKAGEKLGLDV-EVISVP  370 (442)
T ss_pred             HhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHHHHhhCCCC-CeeeCC
Confidence            7778888888999999999999999999999998653234  5899976 579999999999999   88654 333332


Q ss_pred             CcccccCCCCcccCCCcceeecHHhHHhhcCCCccc---ChHHHHHHHHhhhhcC
Q 021331          239 PKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF---DLVEGLADSYNLDFGR  290 (314)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~---~~~~~l~~~~~~~~~~  290 (314)
                      ...        ..........|.+|+++ |||.|++   ++.+++.+++.||+.+
T Consensus       371 ~~~--------~~~~~~~~~~d~~k~~~-LGw~p~~~~~~l~~~l~~~~~~~~~~  416 (442)
T PLN02572        371 NPR--------VEAEEHYYNAKHTKLCE-LGLEPHLLSDSLLDSLLNFAVKYKDR  416 (442)
T ss_pred             CCc--------ccccccccCccHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHhh
Confidence            211        11122345578999975 9999998   8999999999998754

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=1.2e-36  Score=266.96  Aligned_cols=286  Identities=17%  Similarity=0.184  Sum_probs=208.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccc-cCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      |||+||||++|++.|+++|++|++++|+.+... ..+.............++.++.+|++|.+.+.+++...++|+|||+
T Consensus         6 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH~   85 (343)
T TIGR01472         6 TGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPTEIYNL   85 (343)
T ss_pred             EcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCCEEEEC
Confidence            799999999999999999999999998864210 0010000000000014688999999999999999986678999999


Q ss_pred             CCCC----------------cccHHHHHHhCC--CC---CcEEEEeeceeeccCCCCCccC--------ccccchhhHHH
Q 021331           80 NGRE----------------ADEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTES  130 (314)
Q Consensus        80 a~~~----------------~~~~~~~~~~~~--~~---~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~  130 (314)
                      |+..                ..++.+++++|.  ++   .+|||+||..+||.....|..|        .|+.+|..+|.
T Consensus        86 Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~  165 (343)
T TIGR01472        86 AAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHW  165 (343)
T ss_pred             CcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence            9852                235678888876  43   3899999999998643333322        69999999999


Q ss_pred             HHH----hcCCceEEEecCeeeCCCCCCc----hhHHHHHHHHcCCC-eecCCCCCceeeeeeHHHHHHHHHHHhcCCcc
Q 021331          131 VLE----SKGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  201 (314)
Q Consensus       131 ~~~----~~~~~~~ilR~~~v~g~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~  201 (314)
                      +++    ++++++++.|+.++|||+....    .+..++.++..++. ..++|++++.++|+|++|+|++++.+++++. 
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~~-  244 (343)
T TIGR01472       166 ITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQDK-  244 (343)
T ss_pred             HHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcCC-
Confidence            884    3578899999999999964322    23344555555653 3455888999999999999999999998753 


Q ss_pred             CCceEEecCCccccHHHHHHHHHHHhCCCCCeeee-------cCCc----ccccCCCCcccCCCcceeecHHhHHhhcCC
Q 021331          202 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVH-------YNPK----EFDFGKKKAFPFRDQHFFASVEKAKHVLGW  270 (314)
Q Consensus       202 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~-------~~~~----~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~  270 (314)
                       +++|||++++++|+.|+++.+.+.+|.+. ....       .+..    ...+......+........|++|++++|||
T Consensus       245 -~~~yni~~g~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw  322 (343)
T TIGR01472       245 -PDDYVIATGETHSVREFVEVSFEYIGKTL-NWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDLLLGDATKAKEKLGW  322 (343)
T ss_pred             -CccEEecCCCceeHHHHHHHHHHHcCCCc-ccccccccccccccccCceeEEeCccccCCCccchhcCCHHHHHHhhCC
Confidence             46899999999999999999999999643 1100       0000    001111112333445556799999999999


Q ss_pred             CcccChHHHHHHHHhhhhc
Q 021331          271 KPEFDLVEGLADSYNLDFG  289 (314)
Q Consensus       271 ~~~~~~~~~l~~~~~~~~~  289 (314)
                      .|+++++++|+++++++..
T Consensus       323 ~p~~~l~egi~~~~~~~~~  341 (343)
T TIGR01472       323 KPEVSFEKLVKEMVEEDLE  341 (343)
T ss_pred             CCCCCHHHHHHHHHHHHHh
Confidence            9999999999999998763

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=7.4e-37  Score=273.53  Aligned_cols=263  Identities=21%  Similarity=0.238  Sum_probs=204.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|++.|+++|++|++++|...........     .. ...+++++.+|+.+..     +.  ++|+|||+|
T Consensus       126 TGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~-----~~-~~~~~~~~~~Di~~~~-----~~--~~D~ViHlA  192 (436)
T PLN02166        126 TGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVH-----LF-GNPRFELIRHDVVEPI-----LL--EVDQIYHLA  192 (436)
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhh-----hc-cCCceEEEECcccccc-----cc--CCCEEEECc
Confidence            79999999999999999999999999864321111100     00 0136778888887642     34  799999999


Q ss_pred             CC----------------CcccHHHHHHhCC-CCCcEEEEeeceeeccCCCC-----------Ccc--CccccchhhHHH
Q 021331           81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLL-----------PHC--ESRHKGKLNTES  130 (314)
Q Consensus        81 ~~----------------~~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~-----------~~~--e~~~~~k~~~e~  130 (314)
                      +.                |+.++.+++++|. ...+||++||..+||+....           |..  ..|+.+|..+|+
T Consensus       193 a~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~  272 (436)
T PLN02166        193 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET  272 (436)
T ss_pred             eeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHH
Confidence            74                2345789999998 33589999999999864322           221  158999999999


Q ss_pred             HHH----hcCCceEEEecCeeeCCCCC---CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCC
Q 021331          131 VLE----SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  203 (314)
Q Consensus       131 ~~~----~~~~~~~ilR~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~  203 (314)
                      ++.    ..+++++++||+++|||+..   ..++..++.++..++++.+++++++.++|+|++|+|+++..+++.+.  +
T Consensus       273 ~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~--~  350 (436)
T PLN02166        273 LAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEH--V  350 (436)
T ss_pred             HHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC--C
Confidence            875    35899999999999999742   35677788888888888888998999999999999999999987543  5


Q ss_pred             ceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHH
Q 021331          204 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADS  283 (314)
Q Consensus       204 ~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~  283 (314)
                      ++||+++++.+|+.|+++.+.+.+|.+. .+...+..          ........+|++|++++|||.|+++++++|+++
T Consensus       351 giyNIgs~~~~Si~ela~~I~~~~g~~~-~i~~~p~~----------~~~~~~~~~d~~Ka~~~LGw~P~~sl~egl~~~  419 (436)
T PLN02166        351 GPFNLGNPGEFTMLELAEVVKETIDSSA-TIEFKPNT----------ADDPHKRKPDISKAKELLNWEPKISLREGLPLM  419 (436)
T ss_pred             ceEEeCCCCcEeHHHHHHHHHHHhCCCC-CeeeCCCC----------CCCccccccCHHHHHHHcCCCCCCCHHHHHHHH
Confidence            6999999999999999999999999754 33322211          112244567999999999999999999999999


Q ss_pred             Hhhhhc
Q 021331          284 YNLDFG  289 (314)
Q Consensus       284 ~~~~~~  289 (314)
                      ++|++.
T Consensus       420 i~~~~~  425 (436)
T PLN02166        420 VSDFRN  425 (436)
T ss_pred             HHHHHH
Confidence            999865

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=1.9e-36  Score=285.45  Aligned_cols=278  Identities=20%  Similarity=0.250  Sum_probs=212.0

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhh-HHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF-VKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-l~~~~~~~~~d~vi~   78 (314)
                      ||||||+|++|++.|+++ ||+|++++|..........          ..+++++.+|++|... +.++++  ++|+|||
T Consensus       321 TGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~----------~~~~~~~~gDl~d~~~~l~~~l~--~~D~ViH  388 (660)
T PRK08125        321 LGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLG----------HPRFHFVEGDISIHSEWIEYHIK--KCDVVLP  388 (660)
T ss_pred             ECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcC----------CCceEEEeccccCcHHHHHHHhc--CCCEEEE
Confidence            799999999999999986 7999999997654222111          1468999999998655 577787  8999999


Q ss_pred             cCCC----------------CcccHHHHHHhCC-CCCcEEEEeeceeeccCCCCCccC---------------ccccchh
Q 021331           79 INGR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCE---------------SRHKGKL  126 (314)
Q Consensus        79 ~a~~----------------~~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e---------------~~~~~k~  126 (314)
                      +|+.                |..++.+++++|. ..++|||+||..+||.....+..|               .|+.+|.
T Consensus       389 lAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~  468 (660)
T PRK08125        389 LVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQ  468 (660)
T ss_pred             CccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHH
Confidence            9874                2345788999988 338999999999998532222111               4999999


Q ss_pred             hHHHHHH----hcCCceEEEecCeeeCCCCC---------CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHH
Q 021331          127 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  193 (314)
Q Consensus       127 ~~e~~~~----~~~~~~~ilR~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  193 (314)
                      .+|++++    .++++++++||+++|||+..         ..++..++.++..++++.+++++++.++|+|++|+|++++
T Consensus       469 ~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~  548 (660)
T PRK08125        469 LLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALF  548 (660)
T ss_pred             HHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHH
Confidence            9999984    45899999999999999742         2456777788888888888888899999999999999999


Q ss_pred             HHhcCCc--cCCceEEecCCc-cccHHHHHHHHHHHhCCCCCeeeecCCcc-ccc----CCCCcccCCCcceeecHHhHH
Q 021331          194 QVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKAAGFPEPELVHYNPKE-FDF----GKKKAFPFRDQHFFASVEKAK  265 (314)
Q Consensus       194 ~~l~~~~--~~~~~~~i~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~k~~  265 (314)
                      .+++++.  ..+++||+++++ .+|++|+++.+.+.+|.+... ..++... +..    ...............|++|++
T Consensus       549 ~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~  627 (660)
T PRK08125        549 RIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLR-DHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAR  627 (660)
T ss_pred             HHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCccc-ccCCccccccccccccccccccccccccCCChHHHH
Confidence            9998743  247899999985 799999999999999964312 2222211 000    000000112234457999999


Q ss_pred             hhcCCCcccChHHHHHHHHhhhhcCC
Q 021331          266 HVLGWKPEFDLVEGLADSYNLDFGRG  291 (314)
Q Consensus       266 ~~lg~~~~~~~~~~l~~~~~~~~~~~  291 (314)
                      ++|||.|+++++++|+++++|+++..
T Consensus       628 ~~LGw~P~~~lee~l~~~i~~~~~~~  653 (660)
T PRK08125        628 RLLDWEPKIDMQETIDETLDFFLRTV  653 (660)
T ss_pred             HHhCCCCCCcHHHHHHHHHHHHHhcc
Confidence            99999999999999999999988755

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=2.9e-36  Score=266.11  Aligned_cols=263  Identities=20%  Similarity=0.231  Sum_probs=205.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||+++++.|.++||+|++++|.........           .....++.+|++|.+.+..++.  ++|+|||+|
T Consensus        27 tGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~D~Vih~A   93 (370)
T PLN02695         27 TGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSED-----------MFCHEFHLVDLRVMENCLKVTK--GVDHVFNLA   93 (370)
T ss_pred             ECCccHHHHHHHHHHHhCCCEEEEEEeccccccccc-----------cccceEEECCCCCHHHHHHHHh--CCCEEEEcc
Confidence            799999999999999999999999998653211100           0235778899999998888887  899999998


Q ss_pred             CCC-----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCC----C--------CccC--ccccchhh
Q 021331           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL----L--------PHCE--SRHKGKLN  127 (314)
Q Consensus        81 ~~~-----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~----~--------~~~e--~~~~~k~~  127 (314)
                      +..                 ..++.+++++|.  ++++|||+||..+|+....    .        |..+  .|+.+|..
T Consensus        94 a~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~  173 (370)
T PLN02695         94 ADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA  173 (370)
T ss_pred             cccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHH
Confidence            642                 335678999887  7889999999999985321    0        1111  68999999


Q ss_pred             HHHHHH----hcCCceEEEecCeeeCCCCC-----CchhHHHHHHHHc-CCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          128 TESVLE----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKA-GRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       128 ~e~~~~----~~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      +|.++.    +++++++++||+.+|||+..     ..+...++..+.. +.++.+++++++.++|+|++|++++++.++.
T Consensus       174 ~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~  253 (370)
T PLN02695        174 TEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTK  253 (370)
T ss_pred             HHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHh
Confidence            999864    46899999999999999642     1234556665554 4677788999999999999999999999887


Q ss_pred             CCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChH
Q 021331          198 NEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLV  277 (314)
Q Consensus       198 ~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~  277 (314)
                      ++.  +++||+++++.+|+.|+++.+.+..|.+. .+...+...           .......|++|++++|||.|+++++
T Consensus       254 ~~~--~~~~nv~~~~~~s~~el~~~i~~~~g~~~-~i~~~~~~~-----------~~~~~~~d~sk~~~~lgw~p~~~l~  319 (370)
T PLN02695        254 SDF--REPVNIGSDEMVSMNEMAEIALSFENKKL-PIKHIPGPE-----------GVRGRNSDNTLIKEKLGWAPTMRLK  319 (370)
T ss_pred             ccC--CCceEecCCCceeHHHHHHHHHHHhCCCC-CceecCCCC-----------CccccccCHHHHHHhcCCCCCCCHH
Confidence            643  57999999999999999999999999654 333322111           0112347999999999999999999


Q ss_pred             HHHHHHHhhhhcC
Q 021331          278 EGLADSYNLDFGR  290 (314)
Q Consensus       278 ~~l~~~~~~~~~~  290 (314)
                      ++++++++|+...
T Consensus       320 e~i~~~~~~~~~~  332 (370)
T PLN02695        320 DGLRITYFWIKEQ  332 (370)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998874

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=2.3e-36  Score=270.74  Aligned_cols=264  Identities=20%  Similarity=0.250  Sum_probs=204.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|++.|+++|++|++++|...........    .+  ...+++++.+|+.++.     +.  ++|+|||+|
T Consensus       125 TGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~----~~--~~~~~~~i~~D~~~~~-----l~--~~D~ViHlA  191 (442)
T PLN02206        125 TGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMH----HF--SNPNFELIRHDVVEPI-----LL--EVDQIYHLA  191 (442)
T ss_pred             ECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhh----hc--cCCceEEEECCccChh-----hc--CCCEEEEee
Confidence            79999999999999999999999998754321111100    00  0246788889987653     34  799999999


Q ss_pred             CC----------------CcccHHHHHHhCC-CCCcEEEEeeceeeccCCCCCcc-------------CccccchhhHHH
Q 021331           81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHC-------------ESRHKGKLNTES  130 (314)
Q Consensus        81 ~~----------------~~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~-------------e~~~~~k~~~e~  130 (314)
                      +.                |+.++.+++++|. ...+|||+||..+|+.....|..             ..|+.+|..+|+
T Consensus       192 a~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~  271 (442)
T PLN02206        192 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAET  271 (442)
T ss_pred             eecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHH
Confidence            74                2345788999987 33489999999999754322211             158899999999


Q ss_pred             HHH----hcCCceEEEecCeeeCCCC---CCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCC
Q 021331          131 VLE----SKGVNWTSLRPVYIYGPLN---YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  203 (314)
Q Consensus       131 ~~~----~~~~~~~ilR~~~v~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~  203 (314)
                      ++.    .++++++++||+.+|||+.   ...++..++.++..++++.+++++++.++|+|++|+|++++.+++++.  +
T Consensus       272 ~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~~--~  349 (442)
T PLN02206        272 LTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH--V  349 (442)
T ss_pred             HHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcCC--C
Confidence            875    3689999999999999974   235667788888888888888999999999999999999999987643  5


Q ss_pred             ceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHH
Q 021331          204 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADS  283 (314)
Q Consensus       204 ~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~  283 (314)
                      ++||+++++.+|+.|+++.+.+.+|.+. .+...+..          ........+|++|++++|||.|+++++++|+++
T Consensus       350 g~yNIgs~~~~sl~Elae~i~~~~g~~~-~i~~~p~~----------~~~~~~~~~d~sKa~~~LGw~P~~~l~egl~~~  418 (442)
T PLN02206        350 GPFNLGNPGEFTMLELAKVVQETIDPNA-KIEFRPNT----------EDDPHKRKPDITKAKELLGWEPKVSLRQGLPLM  418 (442)
T ss_pred             ceEEEcCCCceeHHHHHHHHHHHhCCCC-ceeeCCCC----------CCCccccccCHHHHHHHcCCCCCCCHHHHHHHH
Confidence            6999999999999999999999998654 44332221          111234567999999999999999999999999


Q ss_pred             HhhhhcC
Q 021331          284 YNLDFGR  290 (314)
Q Consensus       284 ~~~~~~~  290 (314)
                      ++|++++
T Consensus       419 ~~~~~~~  425 (442)
T PLN02206        419 VKDFRQR  425 (442)
T ss_pred             HHHHHHh
Confidence            9998763

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=6.6e-36  Score=262.04  Aligned_cols=280  Identities=19%  Similarity=0.196  Sum_probs=208.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccc-cCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      |||+||||+++++.|+++|++|++++|+.+... ..+.. ..........++.++.+|++|.+.+.+++...++|+|||+
T Consensus        12 TGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~   90 (340)
T PLN02653         12 TGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDH-IYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKPDEVYNL   90 (340)
T ss_pred             ECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhh-hccccccccCceEEEEecCCCHHHHHHHHHHcCCCEEEEC
Confidence            799999999999999999999999998754311 01110 0000000124588999999999999999986678999999


Q ss_pred             CCCC----------------cccHHHHHHhCC--CCC-----cEEEEeeceeeccCCCCCccC--------ccccchhhH
Q 021331           80 NGRE----------------ADEVEPILDALP--NLE-----QFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNT  128 (314)
Q Consensus        80 a~~~----------------~~~~~~~~~~~~--~~~-----~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~  128 (314)
                      |+..                ..++.+++++|.  +++     +||++||..+||.... |..|        .|+.+|..+
T Consensus        91 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~p~~~Y~~sK~~~  169 (340)
T PLN02653         91 AAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFHPRSPYAVAKVAA  169 (340)
T ss_pred             CcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCCCCCChhHHHHHHH
Confidence            9862                234677888876  433     8999999999986432 3322        699999999


Q ss_pred             HHHHH----hcCCceEEEecCeeeCCCCCCch----hHHHHHHHHcCCCee-cCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          129 ESVLE----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRPIP-IPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       129 e~~~~----~~~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      |.+++    ++++.++..|+.++|||+....+    +..++.++..+.+.. ++|++++.++|+|++|+|++++.++.++
T Consensus       170 e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~  249 (340)
T PLN02653        170 HWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQE  249 (340)
T ss_pred             HHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcC
Confidence            99874    45788888999999999654333    333344555665544 3488899999999999999999999875


Q ss_pred             ccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHH
Q 021331          200 KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEG  279 (314)
Q Consensus       200 ~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~  279 (314)
                      .  ++.||+++++++|+.|+++.+.+.+|.+......+....       ..+........|++|++++|||.|+++++++
T Consensus       250 ~--~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~g  320 (340)
T PLN02653        250 K--PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPRY-------FRPAEVDNLKGDASKAREVLGWKPKVGFEQL  320 (340)
T ss_pred             C--CCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCccc-------CCccccccccCCHHHHHHHhCCCCCCCHHHH
Confidence            3  578999999999999999999999996421111111111       1222334556799999999999999999999


Q ss_pred             HHHHHhhhhcCC
Q 021331          280 LADSYNLDFGRG  291 (314)
Q Consensus       280 l~~~~~~~~~~~  291 (314)
                      |+++++|++.+-
T Consensus       321 i~~~~~~~~~~~  332 (340)
T PLN02653        321 VKMMVDEDLELA  332 (340)
T ss_pred             HHHHHHHHHHhc
Confidence            999999987654

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.3e-35  Score=257.81  Aligned_cols=275  Identities=22%  Similarity=0.310  Sum_probs=211.2

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCccc-ccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      |||||++|.+++++|+++|  ++|++++|..... ...+.     .+.. ..++.++.+|++|++++.++++..++|+||
T Consensus         5 tGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   78 (317)
T TIGR01181         5 TGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLA-----DLED-NPRYRFVKGDIGDRELVSRLFTEHQPDAVV   78 (317)
T ss_pred             EcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhh-----hhcc-CCCcEEEEcCCcCHHHHHHHHhhcCCCEEE
Confidence            7999999999999999987  7899887643211 11111     0000 146888999999999999999855599999


Q ss_pred             EcCCCC----------------cccHHHHHHhCC--CC-CcEEEEeeceeeccCCCC-CccC--------ccccchhhHH
Q 021331           78 DINGRE----------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLL-PHCE--------SRHKGKLNTE  129 (314)
Q Consensus        78 ~~a~~~----------------~~~~~~~~~~~~--~~-~~~i~~Ss~~v~~~~~~~-~~~e--------~~~~~k~~~e  129 (314)
                      |+|+..                ..++.+++++|.  .. .++|++||..+|+..... +..|        .|+.+|..+|
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e  158 (317)
T TIGR01181        79 HFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASD  158 (317)
T ss_pred             EcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHH
Confidence            999752                234567888876  23 389999999999854321 2222        6999999999


Q ss_pred             HHHH----hcCCceEEEecCeeeCCCCC-CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCc
Q 021331          130 SVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  204 (314)
Q Consensus       130 ~~~~----~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~  204 (314)
                      .+++    +.+++++++||+.+|||... ..+++.++..+..+.++++++++++.++++|++|+|+++..++.+.. .++
T Consensus       159 ~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~-~~~  237 (317)
T TIGR01181       159 HLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGR-VGE  237 (317)
T ss_pred             HHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCC-CCc
Confidence            8874    46899999999999999753 45677777888888777777888889999999999999999998654 568


Q ss_pred             eEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHH
Q 021331          205 VFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSY  284 (314)
Q Consensus       205 ~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~  284 (314)
                      +||+++++++|+.|+++.+.+.+|.+...+. ....         .+.....+..|++|++++|||.|++++++++++++
T Consensus       238 ~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~-~~~~---------~~~~~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~~  307 (317)
T TIGR01181       238 TYNIGGGNERTNLEVVETILELLGKDEDLIT-HVED---------RPGHDRRYAIDASKIKRELGWAPKYTFEEGLRKTV  307 (317)
T ss_pred             eEEeCCCCceeHHHHHHHHHHHhCCCccccc-ccCC---------CccchhhhcCCHHHHHHHhCCCCCCcHHHHHHHHH
Confidence            9999999999999999999999997542211 1110         11122344679999999999999999999999999


Q ss_pred             hhhhcCCC
Q 021331          285 NLDFGRGT  292 (314)
Q Consensus       285 ~~~~~~~~  292 (314)
                      +|++++++
T Consensus       308 ~~~~~~~~  315 (317)
T TIGR01181       308 QWYLDNEW  315 (317)
T ss_pred             HHHHhccC
Confidence            99988664

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.1e-35  Score=261.30  Aligned_cols=275  Identities=15%  Similarity=0.203  Sum_probs=208.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||+||||+++++.|+++|++|++++|+.........     .+ ....++.++.+|++|.+.+.++++..++|+|||+|
T Consensus        10 tGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-----~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A   83 (349)
T TIGR02622        10 TGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFE-----LL-NLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLA   83 (349)
T ss_pred             ECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHH-----HH-hhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECC
Confidence            7999999999999999999999999987654221100     00 01135778899999999999999866789999999


Q ss_pred             CC----------------CcccHHHHHHhCC--C-CCcEEEEeeceeeccCCC-CCcc--------CccccchhhHHHHH
Q 021331           81 GR----------------EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDL-LPHC--------ESRHKGKLNTESVL  132 (314)
Q Consensus        81 ~~----------------~~~~~~~~~~~~~--~-~~~~i~~Ss~~v~~~~~~-~~~~--------e~~~~~k~~~e~~~  132 (314)
                      +.                |..++.++++++.  + +++||++||..+|+.... .+..        ..|+.+|..+|.++
T Consensus        84 ~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~  163 (349)
T TIGR02622        84 AQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVI  163 (349)
T ss_pred             cccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHH
Confidence            84                2345677888876  3 679999999999975321 1111        26999999999887


Q ss_pred             Hh-----------cCCceEEEecCeeeCCCCC--CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          133 ES-----------KGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       133 ~~-----------~~~~~~ilR~~~v~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      +.           .+++++++||+.+|||++.  ..+++.++..+..++++.+ +++++.++|+|++|+|++++.++++.
T Consensus       164 ~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~-~~g~~~rd~i~v~D~a~a~~~~~~~~  242 (349)
T TIGR02622       164 ASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVII-RNPDATRPWQHVLEPLSGYLLLAEKL  242 (349)
T ss_pred             HHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEE-CCCCcccceeeHHHHHHHHHHHHHHH
Confidence            53           2899999999999999752  3567788888888887776 56788999999999999999887642


Q ss_pred             ----ccCCceEEecCC--ccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcc
Q 021331          200 ----KASRQVFNISGE--KYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPE  273 (314)
Q Consensus       200 ----~~~~~~~~i~~~--~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~  273 (314)
                          ...+++|||+++  ++++..|+++.+.+.++.....+...+ ..       ..+.......+|++|++++|||.|+
T Consensus       243 ~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~d~~k~~~~lgw~p~  314 (349)
T TIGR02622       243 FTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDS-DL-------NHPHEARLLKLDSSKARTLLGWHPR  314 (349)
T ss_pred             hhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeecc-CC-------CCCcccceeecCHHHHHHHhCCCCC
Confidence                123579999974  689999999999988763221222111 10       1122234466799999999999999


Q ss_pred             cChHHHHHHHHhhhhcC
Q 021331          274 FDLVEGLADSYNLDFGR  290 (314)
Q Consensus       274 ~~~~~~l~~~~~~~~~~  290 (314)
                      ++++++++++++|+.+.
T Consensus       315 ~~l~~gi~~~i~w~~~~  331 (349)
T TIGR02622       315 WGLEEAVSRTVDWYKAW  331 (349)
T ss_pred             CCHHHHHHHHHHHHHHH
Confidence            99999999999998763

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=2.3e-35  Score=259.95  Aligned_cols=281  Identities=19%  Similarity=0.243  Sum_probs=210.0

Q ss_pred             CCcccccHHHHHHHHHHCCCe-EEEEEcCCcc-cccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      ||||||||++|++.|+++|++ |+++++.... .......     +. ...+++++.+|++|.+++.+++...++|+|||
T Consensus         6 TGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (352)
T PRK10084          6 TGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLAD-----VS-DSERYVFEHADICDRAELDRIFAQHQPDAVMH   79 (352)
T ss_pred             ECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHh-----cc-cCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence            799999999999999999975 5555553211 0000000     00 01357889999999999999998667999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC-----------CCCcEEEEeeceeeccCC---------C-CCccC--
Q 021331           79 INGRE----------------ADEVEPILDALP-----------NLEQFIYCSSAGVYLKSD---------L-LPHCE--  119 (314)
Q Consensus        79 ~a~~~----------------~~~~~~~~~~~~-----------~~~~~i~~Ss~~v~~~~~---------~-~~~~e--  119 (314)
                      +|+..                ..++.+++++|.           ++++||++||..+|+...         . .++.|  
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~  159 (352)
T PRK10084         80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT  159 (352)
T ss_pred             CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence            99852                335778888875           245899999999998521         0 01111  


Q ss_pred             ------ccccchhhHHHHHH----hcCCceEEEecCeeeCCCCC-CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHH
Q 021331          120 ------SRHKGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  188 (314)
Q Consensus       120 ------~~~~~k~~~e~~~~----~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  188 (314)
                            .|+.+|..+|.+++    .++++++++|++.||||+.. ..++..++..+..+..+.+++++++.++++|++|+
T Consensus       160 ~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~  239 (352)
T PRK10084        160 AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (352)
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHH
Confidence                  79999999998874    45899999999999999853 34666777777777777777888999999999999


Q ss_pred             HHHHHHHhcCCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhc
Q 021331          189 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVL  268 (314)
Q Consensus       189 a~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l  268 (314)
                      |+++..+++++. .+++||+++++++|+.|+++.+++.+|...+......   .........+.....+.+|++|++++|
T Consensus       240 a~a~~~~l~~~~-~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~---~~~~~~~~~~~~~~~~~~d~~k~~~~l  315 (352)
T PRK10084        240 ARALYKVVTEGK-AGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYR---EQITYVADRPGHDRRYAIDASKISREL  315 (352)
T ss_pred             HHHHHHHHhcCC-CCceEEeCCCCcCcHHHHHHHHHHHhccccccccchh---hhccccccCCCCCceeeeCHHHHHHHc
Confidence            999999988644 5789999999999999999999999996432211111   011111112233345678999999999


Q ss_pred             CCCcccChHHHHHHHHhhhhcCC
Q 021331          269 GWKPEFDLVEGLADSYNLDFGRG  291 (314)
Q Consensus       269 g~~~~~~~~~~l~~~~~~~~~~~  291 (314)
                      ||.|+++++++|+++++|+.++.
T Consensus       316 g~~p~~~l~~~l~~~~~~~~~~~  338 (352)
T PRK10084        316 GWKPQETFESGIRKTVEWYLANT  338 (352)
T ss_pred             CCCCcCCHHHHHHHHHHHHHhCH
Confidence            99999999999999999988753

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=8.1e-36  Score=256.32  Aligned_cols=256  Identities=16%  Similarity=0.129  Sum_probs=197.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||+||||++|++.|+++| +|++++|...                      .+.+|++|++.+.++++..++|+|||+|
T Consensus         6 tG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~A   62 (299)
T PRK09987          6 FGKTGQVGWELQRALAPLG-NLIALDVHST----------------------DYCGDFSNPEGVAETVRKIRPDVIVNAA   62 (299)
T ss_pred             ECCCCHHHHHHHHHhhccC-CEEEeccccc----------------------cccCCCCCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999999 7998887532                      1357999999999999866799999998


Q ss_pred             CCC----------------cccHHHHHHhCC-CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHHhc
Q 021331           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLESK  135 (314)
Q Consensus        81 ~~~----------------~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~~~  135 (314)
                      +..                ..++.+++++|. ...+|||+||..||+.....|+.|        .|+.+|..+|++++.+
T Consensus        63 a~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~  142 (299)
T PRK09987         63 AHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEH  142 (299)
T ss_pred             ccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence            862                234678999887 335899999999998654444444        5999999999999888


Q ss_pred             CCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCC--CCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCcc
Q 021331          136 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGS--GIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  213 (314)
Q Consensus       136 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~  213 (314)
                      ..+++++|++++|||+. ..+...++..+..++++.++++  +.+.+.+.+.+|+++++..++..+. .+++||+++++.
T Consensus       143 ~~~~~ilR~~~vyGp~~-~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~-~~giyni~~~~~  220 (299)
T PRK09987        143 CAKHLIFRTSWVYAGKG-NNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPE-VAGLYHLVASGT  220 (299)
T ss_pred             CCCEEEEecceecCCCC-CCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCC-CCCeEEeeCCCC
Confidence            88899999999999965 3466777887777888887776  5555555667778888887776543 346999999999


Q ss_pred             ccHHHHHHHHHHHhCC---CCC--eeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHhhh
Q 021331          214 VTFDGLARACAKAAGF---PEP--ELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLD  287 (314)
Q Consensus       214 ~s~~el~~~i~~~~g~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~~  287 (314)
                      +|+.|+++.+.+..+.   +.+  .+...+...+.     ....++.+..+|++|+++.|||+|+ +|+++|+++++.+
T Consensus       221 ~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~-----~~~~rp~~~~ld~~k~~~~lg~~~~-~~~~~l~~~~~~~  293 (299)
T PRK09987        221 TTWHDYAALVFEEARKAGITLALNKLNAVPTSAYP-----TPARRPHNSRLNTEKFQQNFALVLP-DWQVGVKRMLTEL  293 (299)
T ss_pred             ccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcC-----CCCCCCCcccCCHHHHHHHhCCCCc-cHHHHHHHHHHHH
Confidence            9999999999886543   221  23333222111     1122345668899999999999987 9999999998754

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=5.6e-35  Score=276.91  Aligned_cols=274  Identities=23%  Similarity=0.344  Sum_probs=213.5

Q ss_pred             CCcccccHHHHHHHHHHC--CCeEEEEEcCCcc-cccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      ||||||||++|++.|+++  +++|++++|.... ....+..      .....+++++.+|+.|.+.+..++...++|+||
T Consensus        12 TGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi   85 (668)
T PLN02260         12 TGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNP------SKSSPNFKFVKGDIASADLVNYLLITEGIDTIM   85 (668)
T ss_pred             ECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhh------cccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence            799999999999999998  6899999875311 0001100      001257899999999998888877555899999


Q ss_pred             EcCCCC----------------cccHHHHHHhCC--C-CCcEEEEeeceeeccCCCC---------Cc--cCccccchhh
Q 021331           78 DINGRE----------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLL---------PH--CESRHKGKLN  127 (314)
Q Consensus        78 ~~a~~~----------------~~~~~~~~~~~~--~-~~~~i~~Ss~~v~~~~~~~---------~~--~e~~~~~k~~  127 (314)
                      |+|+..                ..++.+++++|+  + +++|||+||..+||.....         +.  ...|+.+|..
T Consensus        86 HlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~  165 (668)
T PLN02260         86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAG  165 (668)
T ss_pred             ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHHH
Confidence            999863                234678899887  4 7899999999999864321         11  1169999999


Q ss_pred             HHHHHH----hcCCceEEEecCeeeCCCCC-CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccC
Q 021331          128 TESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  202 (314)
Q Consensus       128 ~e~~~~----~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~  202 (314)
                      +|.++.    +++++++++||+.||||+.. ..+++.++..+..++++.+++++++.++|+|++|+|++++.++.++. .
T Consensus       166 aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~-~  244 (668)
T PLN02260        166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE-V  244 (668)
T ss_pred             HHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCC-C
Confidence            999885    35899999999999999764 34667777777888888888899999999999999999999987654 4


Q ss_pred             CceEEecCCccccHHHHHHHHHHHhCCCCCe-eeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHH
Q 021331          203 RQVFNISGEKYVTFDGLARACAKAAGFPEPE-LVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLA  281 (314)
Q Consensus       203 ~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~  281 (314)
                      +++||+++++.+|+.|+++.+.+.+|.+... +...+.          .++....+.+|++|++ +|||.|+++++++++
T Consensus       245 ~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~----------~p~~~~~~~~d~~k~~-~lGw~p~~~~~egl~  313 (668)
T PLN02260        245 GHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVEN----------RPFNDQRYFLDDQKLK-KLGWQERTSWEEGLK  313 (668)
T ss_pred             CCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCC----------CCCCcceeecCHHHHH-HcCCCCCCCHHHHHH
Confidence            6899999999999999999999999975421 111111          2233345668999997 599999999999999


Q ss_pred             HHHhhhhcCCC
Q 021331          282 DSYNLDFGRGT  292 (314)
Q Consensus       282 ~~~~~~~~~~~  292 (314)
                      ++++|+.++..
T Consensus       314 ~~i~w~~~~~~  324 (668)
T PLN02260        314 KTMEWYTSNPD  324 (668)
T ss_pred             HHHHHHHhChh
Confidence            99999998654

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=4.6e-35  Score=234.29  Aligned_cols=264  Identities=23%  Similarity=0.292  Sum_probs=213.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||.||||++|++.|..+||+|++++.-.......+....      .+.+++.+.-|+..+     ++.  .+|.|+|+|
T Consensus        33 tGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~------~~~~fel~~hdv~~p-----l~~--evD~IyhLA   99 (350)
T KOG1429|consen   33 TGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWI------GHPNFELIRHDVVEP-----LLK--EVDQIYHLA   99 (350)
T ss_pred             ecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhc------cCcceeEEEeechhH-----HHH--Hhhhhhhhc
Confidence            7999999999999999999999999976555433332111      146777777787664     666  899999998


Q ss_pred             CC----------------CcccHHHHHHhCC-CCCcEEEEeeceeeccCCCCCccC-------------ccccchhhHHH
Q 021331           81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCE-------------SRHKGKLNTES  130 (314)
Q Consensus        81 ~~----------------~~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e-------------~~~~~k~~~e~  130 (314)
                      +.                |..++.+++-.|+ -.+||++.||..|||++...|..+             -|...|..+|.
T Consensus       100 apasp~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~  179 (350)
T KOG1429|consen  100 APASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAET  179 (350)
T ss_pred             cCCCCcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHH
Confidence            76                4556888888877 458999999999999865444443             47778999998


Q ss_pred             HHH----hcCCceEEEecCeeeCCCC---CCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCC
Q 021331          131 VLE----SKGVNWTSLRPVYIYGPLN---YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  203 (314)
Q Consensus       131 ~~~----~~~~~~~ilR~~~v~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~  203 (314)
                      ++.    +.|+.+.|.|+.+.|||..   .....+.++.+...++++.++|+|.++++|.|++|+++.++.+++.+..  
T Consensus       180 L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~--  257 (350)
T KOG1429|consen  180 LCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYR--  257 (350)
T ss_pred             HHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCc--
Confidence            874    5689999999999999974   4567888999999999999999999999999999999999999998763  


Q ss_pred             ceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHH
Q 021331          204 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADS  283 (314)
Q Consensus       204 ~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~  283 (314)
                      +-+|+++++-+|+.||++++.+..+-.. .++..++.          +........|++++++.|||.|+.+++++|..+
T Consensus       258 ~pvNiGnp~e~Tm~elAemv~~~~~~~s-~i~~~~~~----------~Ddp~kR~pDit~ake~LgW~Pkv~L~egL~~t  326 (350)
T KOG1429|consen  258 GPVNIGNPGEFTMLELAEMVKELIGPVS-EIEFVENG----------PDDPRKRKPDITKAKEQLGWEPKVSLREGLPLT  326 (350)
T ss_pred             CCcccCCccceeHHHHHHHHHHHcCCCc-ceeecCCC----------CCCccccCccHHHHHHHhCCCCCCcHHHhhHHH
Confidence            3599999999999999999999997444 44433322          223445557999999999999999999999999


Q ss_pred             HhhhhcC
Q 021331          284 YNLDFGR  290 (314)
Q Consensus       284 ~~~~~~~  290 (314)
                      +.|+..+
T Consensus       327 ~~~fr~~  333 (350)
T KOG1429|consen  327 VTYFRER  333 (350)
T ss_pred             HHHHHHH
Confidence            9988763

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=1.2e-34  Score=250.64  Aligned_cols=252  Identities=23%  Similarity=0.288  Sum_probs=194.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|++.|++.|++|+++.+.                         ..+|++|.+++.++++..++|+|||+|
T Consensus         3 tGa~GfiG~~l~~~L~~~g~~v~~~~~~-------------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A   57 (306)
T PLN02725          3 AGHRGLVGSAIVRKLEALGFTNLVLRTH-------------------------KELDLTRQADVEAFFAKEKPTYVILAA   57 (306)
T ss_pred             ccCCCcccHHHHHHHHhCCCcEEEeecc-------------------------ccCCCCCHHHHHHHHhccCCCEEEEee
Confidence            7999999999999999999988766432                         136999999999999877899999998


Q ss_pred             CCC-----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC-------------ccccchhhH
Q 021331           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE-------------SRHKGKLNT  128 (314)
Q Consensus        81 ~~~-----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e-------------~~~~~k~~~  128 (314)
                      +..                 ..++.+++++|.  ++++||++||..+|+.....|..|             .|+.+|..+
T Consensus        58 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  137 (306)
T PLN02725         58 AKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAG  137 (306)
T ss_pred             eeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHH
Confidence            642                 234778999987  678999999999998543322221             388999999


Q ss_pred             HHHHH----hcCCceEEEecCeeeCCCCC-----CchhHHHHHH----HHcCCCeec-CCCCCceeeeeeHHHHHHHHHH
Q 021331          129 ESVLE----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHR----LKAGRPIPI-PGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       129 e~~~~----~~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                      |++++    ..+++++++||+.+|||+..     ..+++.++..    ...+.++.+ ++++.+.++++|++|++++++.
T Consensus       138 e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~  217 (306)
T PLN02725        138 IKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVF  217 (306)
T ss_pred             HHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHH
Confidence            87653    56899999999999999742     2334444433    344555554 6888889999999999999999


Q ss_pred             HhcCCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCccc
Q 021331          195 VLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF  274 (314)
Q Consensus       195 ~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~  274 (314)
                      +++++. .++.||+++++.+|+.|+++.+.+.++.+. .+...+.          .+.......+|++|++ .+||.|++
T Consensus       218 ~~~~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~-~~~~~~~----------~~~~~~~~~~d~~k~~-~lg~~p~~  284 (306)
T PLN02725        218 LMRRYS-GAEHVNVGSGDEVTIKELAELVKEVVGFEG-ELVWDTS----------KPDGTPRKLMDSSKLR-SLGWDPKF  284 (306)
T ss_pred             HHhccc-cCcceEeCCCCcccHHHHHHHHHHHhCCCC-ceeecCC----------CCCcccccccCHHHHH-HhCCCCCC
Confidence            998754 346889999999999999999999998654 3322111          1111234567999996 59999999


Q ss_pred             ChHHHHHHHHhhhhcC
Q 021331          275 DLVEGLADSYNLDFGR  290 (314)
Q Consensus       275 ~~~~~l~~~~~~~~~~  290 (314)
                      +++++|+++++|++++
T Consensus       285 ~~~~~l~~~~~~~~~~  300 (306)
T PLN02725        285 SLKDGLQETYKWYLEN  300 (306)
T ss_pred             CHHHHHHHHHHHHHhh
Confidence            9999999999998864

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=1.6e-34  Score=247.60  Aligned_cols=256  Identities=20%  Similarity=0.150  Sum_probs=197.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||+|++++++|+++|++|++++|+                          .+|+.|++.+.++++..++|+|||++
T Consensus         5 ~G~tG~iG~~l~~~l~~~g~~v~~~~r~--------------------------~~d~~~~~~~~~~~~~~~~d~vi~~a   58 (287)
T TIGR01214         5 TGANGQLGRELVQQLSPEGRVVVALTSS--------------------------QLDLTDPEALERLLRAIRPDAVVNTA   58 (287)
T ss_pred             EcCCCHHHHHHHHHHHhcCCEEEEeCCc--------------------------ccCCCCHHHHHHHHHhCCCCEEEECC
Confidence            6999999999999999999999999875                          25888999999999866789999999


Q ss_pred             CCC----------------cccHHHHHHhCC-CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHHhc
Q 021331           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLESK  135 (314)
Q Consensus        81 ~~~----------------~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~~~  135 (314)
                      +..                ..++.++++++. ...+||++||.++|+.....|++|        .|+.+|..+|++++..
T Consensus        59 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~  138 (287)
T TIGR01214        59 AYTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA  138 (287)
T ss_pred             ccccccccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh
Confidence            752                123677888876 334899999999997644334433        6899999999999988


Q ss_pred             CCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCcccc
Q 021331          136 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  215 (314)
Q Consensus       136 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s  215 (314)
                      +.+++++||+.+|||+....+...++..+..+.++.+.+  ++.++++|++|+|+++..++.++...+++||+++++.+|
T Consensus       139 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~s  216 (287)
T TIGR01214       139 GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRLARARGVYHLANSGQCS  216 (287)
T ss_pred             CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECCCCcC
Confidence            999999999999999754556666777777766666544  356899999999999999998764467899999999999


Q ss_pred             HHHHHHHHHHHhCCCCCeeeecCCc-ccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHhh
Q 021331          216 FDGLARACAKAAGFPEPELVHYNPK-EFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNL  286 (314)
Q Consensus       216 ~~el~~~i~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~  286 (314)
                      +.|+++.+.+.+|.+. .....+.. ..................+|++|++++|||.+ +++++++++++++
T Consensus       217 ~~e~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~~-~~~~~~l~~~~~~  286 (287)
T TIGR01214       217 WYEFAQAIFEEAGADG-LLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKTLGTPL-PHWREALRAYLQE  286 (287)
T ss_pred             HHHHHHHHHHHhCccc-ccccCceeEeecHHHcCCCCCCCCccccchHHHHHHcCCCC-ccHHHHHHHHHhh
Confidence            9999999999999764 21111100 00000000111122456789999999999944 5999999998864

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=7.7e-35  Score=251.99  Aligned_cols=262  Identities=18%  Similarity=0.159  Sum_probs=185.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh---hh-HHHhhhc---CCc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DF-VKSSLSA---KGF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~-l~~~~~~---~~~   73 (314)
                      |||+||||++|++.|++.|++++++.|+...... .              ..+..+|+.|.   +. +..++..   .++
T Consensus         5 tGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~-~--------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-F--------------VNLVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             ecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH-H--------------HhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            7999999999999999999987777666543110 0              11223455543   32 2333321   269


Q ss_pred             cEEEEcCCC--------------CcccHHHHHHhCC-CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHH
Q 021331           74 DVVYDINGR--------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTES  130 (314)
Q Consensus        74 d~vi~~a~~--------------~~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~  130 (314)
                      |+|||+|+.              |..++.+++++|. ...+|||+||..+|+.....+..|        .|+.+|..+|+
T Consensus        70 d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  149 (308)
T PRK11150         70 EAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDE  149 (308)
T ss_pred             cEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHH
Confidence            999999873              2334778999888 334799999999998653222222        69999999998


Q ss_pred             HHHh----cCCceEEEecCeeeCCCCCC-c----hhHHHHHHHHcCCCeecC-CCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          131 VLES----KGVNWTSLRPVYIYGPLNYN-P----VEEWFFHRLKAGRPIPIP-GSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       131 ~~~~----~~~~~~ilR~~~v~g~~~~~-~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      ++++    .+++++++||+++|||+... .    +...+..++..+....++ ++++..++++|++|+|++++.+++.+.
T Consensus       150 ~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~~  229 (308)
T PRK11150        150 YVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENGV  229 (308)
T ss_pred             HHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcCC
Confidence            8754    48999999999999997532 1    233444566666654443 566778999999999999999987643


Q ss_pred             cCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcc-cChHHH
Q 021331          201 ASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPE-FDLVEG  279 (314)
Q Consensus       201 ~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~-~~~~~~  279 (314)
                        +++||+++++.+|+.|+++.+.+.+|.......+.+...        ..........|++|+++ +||+|+ .+++++
T Consensus       230 --~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~d~~k~~~-~g~~p~~~~~~~g  298 (308)
T PRK11150        230 --SGIFNCGTGRAESFQAVADAVLAYHKKGEIEYIPFPDKL--------KGRYQAFTQADLTKLRA-AGYDKPFKTVAEG  298 (308)
T ss_pred             --CCeEEcCCCCceeHHHHHHHHHHHhCCCcceeccCcccc--------ccccceecccCHHHHHh-cCCCCCCCCHHHH
Confidence              569999999999999999999999985311111111110        00112234579999986 799987 499999


Q ss_pred             HHHHHhhhh
Q 021331          280 LADSYNLDF  288 (314)
Q Consensus       280 l~~~~~~~~  288 (314)
                      |+++++|+.
T Consensus       299 l~~~~~~~~  307 (308)
T PRK11150        299 VAEYMAWLN  307 (308)
T ss_pred             HHHHHHHhh
Confidence            999999853

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=5.8e-34  Score=251.12  Aligned_cols=278  Identities=22%  Similarity=0.305  Sum_probs=204.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||+|+++++.|+++|++|++++|........... ..........++.++.+|++|++.+.+++...++|+|||+|
T Consensus        11 tGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~vih~a   89 (352)
T PLN02240         11 TGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRR-VKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDAVIHFA   89 (352)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHH-HHHhhcccCccceEEecCcCCHHHHHHHHHhCCCCEEEEcc
Confidence            79999999999999999999999998754321100000 00000001246889999999999999998766899999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHHh
Q 021331           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLES  134 (314)
Q Consensus        81 ~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~~  134 (314)
                      +..                ..++.+++++|.  ++++||++||.++|+.....+.+|        .|+.+|..+|++++.
T Consensus        90 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  169 (352)
T PLN02240         90 GLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRD  169 (352)
T ss_pred             ccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            752                234667888876  678999999999997544333333        689999999998752


Q ss_pred             -----cCCceEEEecCeeeCCCCC-----------CchhHHHHHHHHcCC--CeecCC------CCCceeeeeeHHHHHH
Q 021331          135 -----KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKAGR--PIPIPG------SGIQVTQLGHVKDLAR  190 (314)
Q Consensus       135 -----~~~~~~ilR~~~v~g~~~~-----------~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~~~D~a~  190 (314)
                           .+++++++|++.+||++..           ..++. ++..+..++  .+.+++      ++.+.++|+|++|+|+
T Consensus       170 ~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~  248 (352)
T PLN02240        170 IHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMP-YVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLAD  248 (352)
T ss_pred             HHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHH-HHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHH
Confidence                 4688999999999997421           11222 334444433  344444      5688899999999999


Q ss_pred             HHHHHhcC----CccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHh
Q 021331          191 AFVQVLGN----EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKH  266 (314)
Q Consensus       191 ~~~~~l~~----~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  266 (314)
                      +++.++.+    +...+++||+++++++|++|+++.+.+.+|.+. .+...+.          .+.....+..|++|+++
T Consensus       249 a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~----------~~~~~~~~~~d~~k~~~  317 (352)
T PLN02240        249 GHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKI-PLKLAPR----------RPGDAEEVYASTEKAEK  317 (352)
T ss_pred             HHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCC-CceeCCC----------CCCChhhhhcCHHHHHH
Confidence            99888864    223458999999999999999999999999765 3333322          11223455679999999


Q ss_pred             hcCCCcccChHHHHHHHHhhhhcCC
Q 021331          267 VLGWKPEFDLVEGLADSYNLDFGRG  291 (314)
Q Consensus       267 ~lg~~~~~~~~~~l~~~~~~~~~~~  291 (314)
                      +|||.|+++++++++++++|+++++
T Consensus       318 ~lg~~p~~~l~~~l~~~~~~~~~~~  342 (352)
T PLN02240        318 ELGWKAKYGIDEMCRDQWNWASKNP  342 (352)
T ss_pred             HhCCCCCCCHHHHHHHHHHHHHhCc
Confidence            9999999999999999999998864

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=1.2e-33  Score=247.23  Aligned_cols=269  Identities=19%  Similarity=0.198  Sum_probs=196.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||+||||+++++.|+++|++|++++|+.+.......    ..+.....++.++.+|++|++.+.++++  ++|+|||+|
T Consensus        16 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~A   89 (342)
T PLN02214         16 TGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHL----RELEGGKERLILCKADLQDYEALKAAID--GCDGVFHTA   89 (342)
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHH----HHhhCCCCcEEEEecCcCChHHHHHHHh--cCCEEEEec
Confidence            7999999999999999999999999997653110000    0000011358889999999999999998  899999999


Q ss_pred             CCC-----------cccHHHHHHhCC--CCCcEEEEeec-eeeccCCCC---CccC--------------ccccchhhHH
Q 021331           81 GRE-----------ADEVEPILDALP--NLEQFIYCSSA-GVYLKSDLL---PHCE--------------SRHKGKLNTE  129 (314)
Q Consensus        81 ~~~-----------~~~~~~~~~~~~--~~~~~i~~Ss~-~v~~~~~~~---~~~e--------------~~~~~k~~~e  129 (314)
                      +..           ..++.+++++|.  ++++||++||. .+|+.....   +++|              .|+.+|..+|
T Consensus        90 ~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE  169 (342)
T PLN02214         90 SPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAE  169 (342)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHH
Confidence            863           345788999987  77899999995 588642211   1221              5899999999


Q ss_pred             HHHH----hcCCceEEEecCeeeCCCCCCc---hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccC
Q 021331          130 SVLE----SKGVNWTSLRPVYIYGPLNYNP---VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  202 (314)
Q Consensus       130 ~~~~----~~~~~~~ilR~~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~  202 (314)
                      +++.    +++++++++||+.||||+....   ....++ ....+.... .+  +..++|+|++|+|++++.+++++. .
T Consensus       170 ~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~-~~~~g~~~~-~~--~~~~~~i~V~Dva~a~~~al~~~~-~  244 (342)
T PLN02214        170 QAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVL-KYLTGSAKT-YA--NLTQAYVDVRDVALAHVLVYEAPS-A  244 (342)
T ss_pred             HHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCccc-CC--CCCcCeeEHHHHHHHHHHHHhCcc-c
Confidence            9874    3589999999999999975321   122222 333444332 23  456899999999999999998765 3


Q ss_pred             CceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHH
Q 021331          203 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLAD  282 (314)
Q Consensus       203 ~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~  282 (314)
                      ++.||+++ ...++.|+++.+.+.++...     .+... .    ...+.......+|++|++ +|||+|+ +++++|++
T Consensus       245 ~g~yn~~~-~~~~~~el~~~i~~~~~~~~-----~~~~~-~----~~~~~~~~~~~~d~~k~~-~LG~~p~-~lee~i~~  311 (342)
T PLN02214        245 SGRYLLAE-SARHRGEVVEILAKLFPEYP-----LPTKC-K----DEKNPRAKPYKFTNQKIK-DLGLEFT-STKQSLYD  311 (342)
T ss_pred             CCcEEEec-CCCCHHHHHHHHHHHCCCCC-----CCCCC-c----cccCCCCCccccCcHHHH-HcCCccc-CHHHHHHH
Confidence            56899987 46899999999999986311     11100 0    001112334557999997 5999995 99999999


Q ss_pred             HHhhhhcCCCc
Q 021331          283 SYNLDFGRGTY  293 (314)
Q Consensus       283 ~~~~~~~~~~~  293 (314)
                      +++|+++.+++
T Consensus       312 ~~~~~~~~~~~  322 (342)
T PLN02214        312 TVKSLQEKGHL  322 (342)
T ss_pred             HHHHHHHcCCC
Confidence            99999998877

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=1.3e-33  Score=247.44  Aligned_cols=272  Identities=20%  Similarity=0.250  Sum_probs=194.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||+||||++|+++|+++|++|+++.|+..........   ..+.+ ..++.++.+|++|++.+.++++  ++|+|||+|
T Consensus        15 tG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~-~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A   88 (338)
T PLN00198         15 IGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHL---RALQE-LGDLKIFGADLTDEESFEAPIA--GCDLVFHVA   88 (338)
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH---HhcCC-CCceEEEEcCCCChHHHHHHHh--cCCEEEEeC
Confidence            79999999999999999999999998876432110000   00000 1358899999999999999998  899999999


Q ss_pred             CCC---------------cccHHHHHHhCC---CCCcEEEEeeceeeccCC----CC-----------------CccCcc
Q 021331           81 GRE---------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSD----LL-----------------PHCESR  121 (314)
Q Consensus        81 ~~~---------------~~~~~~~~~~~~---~~~~~i~~Ss~~v~~~~~----~~-----------------~~~e~~  121 (314)
                      +..               ..++.++++++.   ++++||++||..+|+...    ..                 +....|
T Consensus        89 ~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y  168 (338)
T PLN00198         89 TPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGY  168 (338)
T ss_pred             CCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccchh
Confidence            841               223567888765   468999999999987421    10                 111259


Q ss_pred             ccchhhHHHHHH----hcCCceEEEecCeeeCCCCCC---chhHHHHHHHHcCCCeecCC-CCC----ceeeeeeHHHHH
Q 021331          122 HKGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPG-SGI----QVTQLGHVKDLA  189 (314)
Q Consensus       122 ~~~k~~~e~~~~----~~~~~~~ilR~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~i~~~D~a  189 (314)
                      +.+|..+|.++.    +++++++++||+.||||+...   .++ .++..+..++.+.+.+ ++.    ..++|+|++|+|
T Consensus       169 ~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a  247 (338)
T PLN00198        169 PASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSL-SLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVC  247 (338)
T ss_pred             HHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcH-HHHHHHHcCCccccccccccccccCCcceeEHHHHH
Confidence            999999998764    468999999999999997432   122 2333455565555544 222    237999999999


Q ss_pred             HHHHHHhcCCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcC
Q 021331          190 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLG  269 (314)
Q Consensus       190 ~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg  269 (314)
                      ++++.++.++.. ++.|+ +++..+|+.|+++.+.+.++....... .       +..   + .......|++|+++ +|
T Consensus       248 ~a~~~~~~~~~~-~~~~~-~~~~~~s~~el~~~i~~~~~~~~~~~~-~-------~~~---~-~~~~~~~~~~k~~~-~G  312 (338)
T PLN00198        248 RAHIFLAEKESA-SGRYI-CCAANTSVPELAKFLIKRYPQYQVPTD-F-------GDF---P-SKAKLIISSEKLIS-EG  312 (338)
T ss_pred             HHHHHHhhCcCc-CCcEE-EecCCCCHHHHHHHHHHHCCCCCCCcc-c-------ccc---C-CCCccccChHHHHh-CC
Confidence            999999987543 44675 455679999999999998863211111 0       100   0 11345578999987 69


Q ss_pred             CCcccChHHHHHHHHhhhhcCCCcc
Q 021331          270 WKPEFDLVEGLADSYNLDFGRGTYR  294 (314)
Q Consensus       270 ~~~~~~~~~~l~~~~~~~~~~~~~~  294 (314)
                      |.|+++++++|+++++|+++.+++.
T Consensus       313 ~~p~~~l~~gi~~~~~~~~~~~~~~  337 (338)
T PLN00198        313 FSFEYGIEEIYDQTVEYFKAKGLLK  337 (338)
T ss_pred             ceecCcHHHHHHHHHHHHHHcCCCC
Confidence            9999999999999999999887654

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=1.7e-33  Score=246.83  Aligned_cols=273  Identities=23%  Similarity=0.330  Sum_probs=200.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      ||||||+|++|++.|+++|++|++++|........+.     .+... ..++.++.+|++|++.+.+++...++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          6 TGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLP-----VIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHH-----HHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            7999999999999999999999999865332111110     00000 13567889999999999999876679999999


Q ss_pred             CCCCc----------------ccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCcc---------CccccchhhHHHHH
Q 021331           80 NGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHC---------ESRHKGKLNTESVL  132 (314)
Q Consensus        80 a~~~~----------------~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~---------e~~~~~k~~~e~~~  132 (314)
                      |+...                .++.+++++|.  ++++||++||.++|+.....+++         ..|+.+|..+|+++
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~  160 (338)
T PRK10675         81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_pred             CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHH
Confidence            87532                24667888877  67899999999999754322221         26889999999988


Q ss_pred             Hh-----cCCceEEEecCeeeCCCCC-----------CchhHHHHHHHHcCC--CeecCC------CCCceeeeeeHHHH
Q 021331          133 ES-----KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKAGR--PIPIPG------SGIQVTQLGHVKDL  188 (314)
Q Consensus       133 ~~-----~~~~~~ilR~~~v~g~~~~-----------~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~~~D~  188 (314)
                      ++     .+++++++|++.+|||...           ..++..+ .++..+.  .+.+++      ++.+.++++|++|+
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~  239 (338)
T PRK10675        161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYI-AQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL  239 (338)
T ss_pred             HHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHH-HHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHH
Confidence            63     3688999999999997311           1123333 3333332  233333      56788999999999


Q ss_pred             HHHHHHHhcC--CccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHh
Q 021331          189 ARAFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKH  266 (314)
Q Consensus       189 a~~~~~~l~~--~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  266 (314)
                      |++++.++..  +...+++||+++++.+|+.|+++.+.+.+|.+. .+...+..          +........|++|+++
T Consensus       240 a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~----------~~~~~~~~~~~~k~~~  308 (338)
T PRK10675        240 ADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPV-NYHFAPRR----------EGDLPAYWADASKADR  308 (338)
T ss_pred             HHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCC-CeeeCCCC----------CCchhhhhcCHHHHHH
Confidence            9999999875  222457999999999999999999999999764 33332211          1122345679999999


Q ss_pred             hcCCCcccChHHHHHHHHhhhhcC
Q 021331          267 VLGWKPEFDLVEGLADSYNLDFGR  290 (314)
Q Consensus       267 ~lg~~~~~~~~~~l~~~~~~~~~~  290 (314)
                      ++||.|+++++++++++++|+..+
T Consensus       309 ~lg~~p~~~~~~~~~~~~~~~~~~  332 (338)
T PRK10675        309 ELNWRVTRTLDEMAQDTWHWQSRH  332 (338)
T ss_pred             HhCCCCcCcHHHHHHHHHHHHHhh
Confidence            999999999999999999998763

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=3.3e-33  Score=242.51  Aligned_cols=267  Identities=21%  Similarity=0.228  Sum_probs=196.9

Q ss_pred             CCcccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc--CCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~--~~~d~vi   77 (314)
                      ||||||+|+++++.|.++|+ +|++++|.....  .+.        .  .....+.+|+.+.+.++.+.+.  .++|+||
T Consensus         4 tGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--~~~--------~--~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vv   71 (314)
T TIGR02197         4 TGGAGFIGSNLVKALNERGITDILVVDNLRDGH--KFL--------N--LADLVIADYIDKEDFLDRLEKGAFGKIEAIF   71 (314)
T ss_pred             eCCcchhhHHHHHHHHHcCCceEEEEecCCCch--hhh--------h--hhheeeeccCcchhHHHHHHhhccCCCCEEE
Confidence            79999999999999999997 788887765331  111        0  1123466788887777665531  3799999


Q ss_pred             EcCCCC--------------cccHHHHHHhCC-CCCcEEEEeeceeeccCCCC-----C---ccCccccchhhHHHHHHh
Q 021331           78 DINGRE--------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLL-----P---HCESRHKGKLNTESVLES  134 (314)
Q Consensus        78 ~~a~~~--------------~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~-----~---~~e~~~~~k~~~e~~~~~  134 (314)
                      |+|+..              ..++.+++++|. ...+||++||.++|+.....     +   ....|+.+|..+|.++++
T Consensus        72 h~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~  151 (314)
T TIGR02197        72 HQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRR  151 (314)
T ss_pred             ECccccCccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHHH
Confidence            999752              345678888886 33489999999999853211     1   111689999999998764


Q ss_pred             ------cCCceEEEecCeeeCCCCC-----CchhHHHHHHHHcCCCeecC------CCCCceeeeeeHHHHHHHHHHHhc
Q 021331          135 ------KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIP------GSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       135 ------~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                            .+++++++||+.+|||+..     ..++..++..+..+..+.++      +++++.++++|++|++++++.++.
T Consensus       152 ~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~  231 (314)
T TIGR02197       152 RVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLE  231 (314)
T ss_pred             HhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHh
Confidence                  2468999999999999743     13455666677777665543      457778999999999999999998


Q ss_pred             CCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChH
Q 021331          198 NEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLV  277 (314)
Q Consensus       198 ~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~  277 (314)
                      . . .+++||+++++++|+.|+++.+.+.+|.+. .+...+.+...      .........+|++|+++.+||.|+++++
T Consensus       232 ~-~-~~~~yni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~------~~~~~~~~~~~~~k~~~~l~~~p~~~l~  302 (314)
T TIGR02197       232 N-G-VSGIFNLGTGRARSFNDLADAVFKALGKDE-KIEYIPMPEAL------RGKYQYFTQADITKLRAAGYYGPFTTLE  302 (314)
T ss_pred             c-c-cCceEEcCCCCCccHHHHHHHHHHHhCCCC-cceeccCcccc------ccccccccccchHHHHHhcCCCCcccHH
Confidence            7 2 467999999999999999999999999754 33322221100      0011223457999999999999999999


Q ss_pred             HHHHHHHhhhh
Q 021331          278 EGLADSYNLDF  288 (314)
Q Consensus       278 ~~l~~~~~~~~  288 (314)
                      ++++++++|+.
T Consensus       303 ~~l~~~~~~~~  313 (314)
T TIGR02197       303 EGVKDYVQWLL  313 (314)
T ss_pred             HHHHHHHHHHh
Confidence            99999999964

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=100.00  E-value=3.5e-34  Score=243.79  Aligned_cols=252  Identities=26%  Similarity=0.322  Sum_probs=191.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||+|++|++|++.|.++|++|++++|+                          ..|++|.+.+.+.+...++|+|||+|
T Consensus         6 ~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------------------~~dl~d~~~~~~~~~~~~pd~Vin~a   59 (286)
T PF04321_consen    6 TGASGFLGSALARALKERGYEVIATSRS--------------------------DLDLTDPEAVAKLLEAFKPDVVINCA   59 (286)
T ss_dssp             ETTTSHHHHHHHHHHTTTSEEEEEESTT--------------------------CS-TTSHHHHHHHHHHH--SEEEE--
T ss_pred             ECCCCHHHHHHHHHHhhCCCEEEEeCch--------------------------hcCCCCHHHHHHHHHHhCCCeEeccc
Confidence            6999999999999999999999998766                          24889999999999877899999999


Q ss_pred             CCC----------------cccHHHHHHhCC-CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHHhc
Q 021331           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLESK  135 (314)
Q Consensus        81 ~~~----------------~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~~~  135 (314)
                      +..                ...+.+++++|. ...++||+||..||++....|+.|        .|+++|.++|+.+++.
T Consensus        60 a~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~  139 (286)
T PF04321_consen   60 AYTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAA  139 (286)
T ss_dssp             ----HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH
T ss_pred             eeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHh
Confidence            862                345778888888 556999999999998776666666        6999999999999987


Q ss_pred             CCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc---cCCceEEecCCc
Q 021331          136 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK---ASRQVFNISGEK  212 (314)
Q Consensus       136 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~---~~~~~~~i~~~~  212 (314)
                      .-+++|+|++++||+ ....++.+++..+..++.+.++  .++.+++++++|+|+++..++++..   ...++||+++++
T Consensus       140 ~~~~~IlR~~~~~g~-~~~~~~~~~~~~~~~~~~i~~~--~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~  216 (286)
T PF04321_consen  140 CPNALILRTSWVYGP-SGRNFLRWLLRRLRQGEPIKLF--DDQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPE  216 (286)
T ss_dssp             -SSEEEEEE-SEESS-SSSSHHHHHHHHHHCTSEEEEE--SSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS
T ss_pred             cCCEEEEecceeccc-CCCchhhhHHHHHhcCCeeEee--CCceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCc
Confidence            679999999999999 3456888899999888888774  4678999999999999999998743   245899999999


Q ss_pred             cccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHhhh
Q 021331          213 YVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLD  287 (314)
Q Consensus       213 ~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~~  287 (314)
                      .+|+.|+++.+.+.+|.+...+.+.+...+...     ..++.+..+|+.|+++.||.+++ +|+++|+++++.+
T Consensus       217 ~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~-----~~rp~~~~L~~~kl~~~~g~~~~-~~~~~l~~~~~~~  285 (286)
T PF04321_consen  217 RVSRYEFAEAIAKILGLDPELIKPVSSSEFPRA-----APRPRNTSLDCRKLKNLLGIKPP-PWREGLEELVKQY  285 (286)
T ss_dssp             -EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTS-----SGS-SBE-B--HHHHHCTTS----BHHHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHHhCCCCceEEecccccCCCC-----CCCCCcccccHHHHHHccCCCCc-CHHHHHHHHHHHh
Confidence            999999999999999988767777665554322     22346788999999999999998 9999999998765

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=4.7e-33  Score=244.98  Aligned_cols=273  Identities=18%  Similarity=0.211  Sum_probs=191.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||+||||++++++|+++|++|++++|+......... .  ........++.++.+|++|++.+.++++  ++|+|||+|
T Consensus        11 TGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~--~~~~~~~~~~~~v~~Dl~d~~~~~~~~~--~~d~ViH~A   85 (351)
T PLN02650         11 TGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKH-L--LDLPGATTRLTLWKADLAVEGSFDDAIR--GCTGVFHVA   85 (351)
T ss_pred             eCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHH-H--HhccCCCCceEEEEecCCChhhHHHHHh--CCCEEEEeC
Confidence            7999999999999999999999999987644211000 0  0000001358899999999999999998  899999998


Q ss_pred             CCC---------------cccHHHHHHhCC--C-CCcEEEEeeceeeccCC-CCC-cc-----------------Ccccc
Q 021331           81 GRE---------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSD-LLP-HC-----------------ESRHK  123 (314)
Q Consensus        81 ~~~---------------~~~~~~~~~~~~--~-~~~~i~~Ss~~v~~~~~-~~~-~~-----------------e~~~~  123 (314)
                      +..               ..++.+++++|.  + +++|||+||.++|+... ..| +.                 ..|+.
T Consensus        86 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~  165 (351)
T PLN02650         86 TPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFV  165 (351)
T ss_pred             CCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHHH
Confidence            742               234678888886  3 67999999987764321 111 11                 15999


Q ss_pred             chhhHHHHHH----hcCCceEEEecCeeeCCCCCCchhHHHHHHH--HcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          124 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL--KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       124 ~k~~~e~~~~----~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      +|..+|.++.    +++++++++||+.+|||+........++..+  ..+.... ++. ...++|+|++|+|++++.+++
T Consensus       166 sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~r~~v~V~Dva~a~~~~l~  243 (351)
T PLN02650        166 SKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAH-YSI-IKQGQFVHLDDLCNAHIFLFE  243 (351)
T ss_pred             HHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccc-cCc-CCCcceeeHHHHHHHHHHHhc
Confidence            9999998764    5689999999999999975432222222222  2222211 122 234799999999999999998


Q ss_pred             CCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChH
Q 021331          198 NEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLV  277 (314)
Q Consensus       198 ~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~  277 (314)
                      ++.. ++.| ++++..+|+.|+++.+.+.++... .....+      +    .+........|++|++ +|||.|+++++
T Consensus       244 ~~~~-~~~~-i~~~~~~s~~el~~~i~~~~~~~~-~~~~~~------~----~~~~~~~~~~d~~k~~-~lG~~p~~~l~  309 (351)
T PLN02650        244 HPAA-EGRY-ICSSHDATIHDLAKMLREKYPEYN-IPARFP------G----IDEDLKSVEFSSKKLT-DLGFTFKYSLE  309 (351)
T ss_pred             CcCc-CceE-EecCCCcCHHHHHHHHHHhCcccC-CCCCCC------C----cCcccccccCChHHHH-HhCCCCCCCHH
Confidence            7653 4578 556677999999999999887321 000000      0    1112234456888875 69999999999


Q ss_pred             HHHHHHHhhhhcCCCcc
Q 021331          278 EGLADSYNLDFGRGTYR  294 (314)
Q Consensus       278 ~~l~~~~~~~~~~~~~~  294 (314)
                      ++|+++++|+...+.++
T Consensus       310 egl~~~i~~~~~~~~~~  326 (351)
T PLN02650        310 DMFDGAIETCREKGLIP  326 (351)
T ss_pred             HHHHHHHHHHHHcCCCC
Confidence            99999999999887664

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.4e-32  Score=238.54  Aligned_cols=266  Identities=31%  Similarity=0.430  Sum_probs=211.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCc-cEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF-DVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~-d~vi~~   79 (314)
                      ||||||||++|++.|+++||+|++++|.........            .++.++.+|++|.+.+.++..  .. |+|||+
T Consensus         6 tG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~--~~~d~vih~   71 (314)
T COG0451           6 TGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------------SGVEFVVLDLTDRDLVDELAK--GVPDAVIHL   71 (314)
T ss_pred             EcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------------cccceeeecccchHHHHHHHh--cCCCEEEEc
Confidence            799999999999999999999999999877633211            367889999999988888887  55 999999


Q ss_pred             CCCC-----------------cccHHHHHHhCC--CCCcEEEEeeceeeccC-CCCCccCc---------cccchhhHHH
Q 021331           80 NGRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCES---------RHKGKLNTES  130 (314)
Q Consensus        80 a~~~-----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~-~~~~~~e~---------~~~~k~~~e~  130 (314)
                      |+..                 ..++.+++++|.  ++++|||.||.++|+.. ...+..|.         |+.+|..+|+
T Consensus        72 aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~  151 (314)
T COG0451          72 AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQ  151 (314)
T ss_pred             cccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHH
Confidence            8752                 234778899988  88999998887877643 21233333         9999999999


Q ss_pred             HHHh----cCCceEEEecCeeeCCCCCCc----hhHHHHHHHHcCCC-eecCCCCCceeeeeeHHHHHHHHHHHhcCCcc
Q 021331          131 VLES----KGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  201 (314)
Q Consensus       131 ~~~~----~~~~~~ilR~~~v~g~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~  201 (314)
                      .+..    ++++++++||+.||||+....    +...++.++..+.+ ..+.+++...++++|++|++++++.+++++..
T Consensus       152 ~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  231 (314)
T COG0451         152 LLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDG  231 (314)
T ss_pred             HHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCC
Confidence            9864    359999999999999986543    44455555666665 55656778888999999999999999998764


Q ss_pred             CCceEEecCCc-cccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHH
Q 021331          202 SRQVFNISGEK-YVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGL  280 (314)
Q Consensus       202 ~~~~~~i~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l  280 (314)
                       + +||++++. ..+..|+++.+.+.+|...+.+...+.        ............|+.|++++|||.|++++++++
T Consensus       232 -~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~~i  301 (314)
T COG0451         232 -G-VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPL--------GRRGDLREGKLLDISKARAALGWEPKVSLEEGL  301 (314)
T ss_pred             -c-EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCC--------CCCCcccccccCCHHHHHHHhCCCCCCCHHHHH
Confidence             3 99999997 899999999999999987533222221        113334567778999999999999999999999


Q ss_pred             HHHHhhhhcC
Q 021331          281 ADSYNLDFGR  290 (314)
Q Consensus       281 ~~~~~~~~~~  290 (314)
                      .++++|+...
T Consensus       302 ~~~~~~~~~~  311 (314)
T COG0451         302 ADTLEWLLKK  311 (314)
T ss_pred             HHHHHHHHHh
Confidence            9999987654

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=9.1e-33  Score=240.82  Aligned_cols=269  Identities=16%  Similarity=0.143  Sum_probs=193.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||+||||+++++.|+++|++|++++|+.........   .........+++++.+|++|++.+.++++  ++|+|||+|
T Consensus        11 tG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vih~A   85 (325)
T PLN02989         11 TGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDH---LLALDGAKERLKLFKADLLDEGSFELAID--GCETVFHTA   85 (325)
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHH---HHhccCCCCceEEEeCCCCCchHHHHHHc--CCCEEEEeC
Confidence            7999999999999999999999999887654211000   00000001468899999999999999998  899999999


Q ss_pred             CCC----------------cccHHHHHHhCC---CCCcEEEEeeceeeccCC-----CCCccC--------------ccc
Q 021331           81 GRE----------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSD-----LLPHCE--------------SRH  122 (314)
Q Consensus        81 ~~~----------------~~~~~~~~~~~~---~~~~~i~~Ss~~v~~~~~-----~~~~~e--------------~~~  122 (314)
                      +..                ..++.++++++.   +.++||++||..+|+...     ..+.+|              .|+
T Consensus        86 ~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~  165 (325)
T PLN02989         86 SPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYV  165 (325)
T ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchH
Confidence            852                223567788765   457999999987764321     111111              499


Q ss_pred             cchhhHHHHHH----hcCCceEEEecCeeeCCCCCC--chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          123 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       123 ~~k~~~e~~~~----~~~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      .+|..+|.++.    +++++++++||+.+|||+...  .+...++..+..++.. + +  .+.++|+|++|+|++++.++
T Consensus       166 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~-~-~--~~~r~~i~v~Dva~a~~~~l  241 (325)
T PLN02989        166 LSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP-F-N--TTHHRFVDVRDVALAHVKAL  241 (325)
T ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCC-C-C--CcCcCeeEHHHHHHHHHHHh
Confidence            99999998874    468999999999999997542  2444455555555432 2 2  34578999999999999999


Q ss_pred             cCCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccCh
Q 021331          197 GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDL  276 (314)
Q Consensus       197 ~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~  276 (314)
                      +++.. +++||+++ ..+|+.|+++.+.+.++...  +. .....       ........+..|++|+++ |||.|++++
T Consensus       242 ~~~~~-~~~~ni~~-~~~s~~ei~~~i~~~~~~~~--~~-~~~~~-------~~~~~~~~~~~~~~k~~~-lg~~p~~~l  308 (325)
T PLN02989        242 ETPSA-NGRYIIDG-PVVTIKDIENVLREFFPDLC--IA-DRNED-------ITELNSVTFNVCLDKVKS-LGIIEFTPT  308 (325)
T ss_pred             cCccc-CceEEEec-CCCCHHHHHHHHHHHCCCCC--CC-CCCCC-------cccccccCcCCCHHHHHH-cCCCCCCCH
Confidence            87653 56999964 57999999999999997321  11 01000       011122355688999886 999999999


Q ss_pred             HHHHHHHHhhhhcCC
Q 021331          277 VEGLADSYNLDFGRG  291 (314)
Q Consensus       277 ~~~l~~~~~~~~~~~  291 (314)
                      +++|+++++|++..+
T Consensus       309 ~~gi~~~~~~~~~~~  323 (325)
T PLN02989        309 ETSLRDTVLSLKEKC  323 (325)
T ss_pred             HHHHHHHHHHHHHhC
Confidence            999999999987655

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.6e-32  Score=239.04  Aligned_cols=269  Identities=17%  Similarity=0.153  Sum_probs=192.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++++++|+++|++|++++|+...... ...  .........+++++.+|++|++.+..+++  ++|+|||+|
T Consensus        10 tGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~A   84 (322)
T PLN02662         10 TGASGYIASWLVKLLLQRGYTVKATVRDPNDPKK-TEH--LLALDGAKERLHLFKANLLEEGSFDSVVD--GCEGVFHTA   84 (322)
T ss_pred             ECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhh-HHH--HHhccCCCCceEEEeccccCcchHHHHHc--CCCEEEEeC
Confidence            7999999999999999999999999987643110 000  00000012468899999999999999998  899999999


Q ss_pred             CCC---------------cccHHHHHHhCC---CCCcEEEEeece--eeccCC---CCCcc--------------Ccccc
Q 021331           81 GRE---------------ADEVEPILDALP---NLEQFIYCSSAG--VYLKSD---LLPHC--------------ESRHK  123 (314)
Q Consensus        81 ~~~---------------~~~~~~~~~~~~---~~~~~i~~Ss~~--v~~~~~---~~~~~--------------e~~~~  123 (314)
                      +..               +.++.++++++.   ++++||++||.+  +|+...   ..+.+              ..|+.
T Consensus        85 ~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~  164 (322)
T PLN02662         85 SPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVL  164 (322)
T ss_pred             CcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHH
Confidence            741               234677888765   568999999976  464321   11111              15888


Q ss_pred             chhhHHHHHH----hcCCceEEEecCeeeCCCCCC--chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          124 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       124 ~k~~~e~~~~----~~~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      +|..+|+++.    +++++++++||+.+|||+...  ......+..+..+... .   +++.++|+|++|+|++++.++.
T Consensus       165 sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~i~v~Dva~a~~~~~~  240 (322)
T PLN02662        165 SKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT-F---PNASYRWVDVRDVANAHIQAFE  240 (322)
T ss_pred             HHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc-C---CCCCcCeEEHHHHHHHHHHHhc
Confidence            9999998764    568999999999999997432  2333344444444431 1   2456899999999999999998


Q ss_pred             CCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChH
Q 021331          198 NEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLV  277 (314)
Q Consensus       198 ~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~  277 (314)
                      ++.. ++.|++++ ..+|+.|+++.+.+.++...     .+....  .   ..+ .......|++|+++ |||.+. +++
T Consensus       241 ~~~~-~~~~~~~g-~~~s~~e~~~~i~~~~~~~~-----~~~~~~--~---~~~-~~~~~~~d~~k~~~-lg~~~~-~~~  305 (322)
T PLN02662        241 IPSA-SGRYCLVE-RVVHYSEVVKILHELYPTLQ-----LPEKCA--D---DKP-YVPTYQVSKEKAKS-LGIEFI-PLE  305 (322)
T ss_pred             CcCc-CCcEEEeC-CCCCHHHHHHHHHHHCCCCC-----CCCCCC--C---ccc-cccccccChHHHHH-hCCccc-cHH
Confidence            7653 45788874 67999999999999987421     111100  0   011 22345689999985 999975 999


Q ss_pred             HHHHHHHhhhhcCCCc
Q 021331          278 EGLADSYNLDFGRGTY  293 (314)
Q Consensus       278 ~~l~~~~~~~~~~~~~  293 (314)
                      ++++++++|++.++++
T Consensus       306 ~~l~~~~~~~~~~~~~  321 (322)
T PLN02662        306 VSLKDTVESLKEKGFL  321 (322)
T ss_pred             HHHHHHHHHHHHcCCC
Confidence            9999999999988763

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=100.00  E-value=4.1e-32  Score=237.02  Aligned_cols=272  Identities=21%  Similarity=0.319  Sum_probs=200.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||||++|.++++.|+++|++|++++|........+..     ... ..+++++.+|+.+++.+.+++...++|+|||++
T Consensus         5 ~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~a   78 (328)
T TIGR01179         5 TGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKR-----GER-ITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFA   78 (328)
T ss_pred             eCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhh-----hcc-ccceEEEECCCCCHHHHHHHHHhCCCcEEEECc
Confidence            79999999999999999999999887643321111110     000 125778899999999999998766799999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHHh
Q 021331           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLES  134 (314)
Q Consensus        81 ~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~~  134 (314)
                      +..                ..++.+++++|.  +++++|++||.++|+.....+.+|        .|+.+|..+|.+++.
T Consensus        79 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~  158 (328)
T TIGR01179        79 GLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRD  158 (328)
T ss_pred             cccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHH
Confidence            852                234667888876  667999999999997654333332        588999999988753


Q ss_pred             -----cCCceEEEecCeeeCCCCC----------CchhHHHHHHHH-cCCCeecC------CCCCceeeeeeHHHHHHHH
Q 021331          135 -----KGVNWTSLRPVYIYGPLNY----------NPVEEWFFHRLK-AGRPIPIP------GSGIQVTQLGHVKDLARAF  192 (314)
Q Consensus       135 -----~~~~~~ilR~~~v~g~~~~----------~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~i~~~D~a~~~  192 (314)
                           .+++++++||+.+|||...          ..++..+..... ....+.++      ++++..++|+|++|+++++
T Consensus       159 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~  238 (328)
T TIGR01179       159 LSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAH  238 (328)
T ss_pred             HHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHH
Confidence                 6899999999999998521          123333433333 22333332      2456778999999999999


Q ss_pred             HHHhcCC--ccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCC
Q 021331          193 VQVLGNE--KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGW  270 (314)
Q Consensus       193 ~~~l~~~--~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~  270 (314)
                      +.++.+.  ...+++||+++++++|+.|+++.+.+.+|++. .+...+..          .........|++|++++|||
T Consensus       239 ~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~-~~~~~~~~----------~~~~~~~~~~~~~~~~~lg~  307 (328)
T TIGR01179       239 LAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDF-PVELAPRR----------PGDPASLVADASKIRRELGW  307 (328)
T ss_pred             HHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCc-ceEeCCCC----------CccccchhcchHHHHHHhCC
Confidence            9998752  23568999999999999999999999999765 33322221          11123455799999999999


Q ss_pred             CcccC-hHHHHHHHHhhhhc
Q 021331          271 KPEFD-LVEGLADSYNLDFG  289 (314)
Q Consensus       271 ~~~~~-~~~~l~~~~~~~~~  289 (314)
                      .|.++ ++++++++++|+.+
T Consensus       308 ~p~~~~l~~~~~~~~~~~~~  327 (328)
T TIGR01179       308 QPKYTDLEIIIKTAWRWESR  327 (328)
T ss_pred             CCCcchHHHHHHHHHHHHhc
Confidence            99997 99999999998765

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=6.6e-33  Score=234.58  Aligned_cols=225  Identities=24%  Similarity=0.374  Sum_probs=179.3

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcccc-cCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      |||+||+|++|+++|+++|  ++|+++++...... .....         .....++++|++|++++.++++  ++|+||
T Consensus         3 TGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~---------~~~~~~~~~Di~d~~~l~~a~~--g~d~V~   71 (280)
T PF01073_consen    3 TGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQK---------SGVKEYIQGDITDPESLEEALE--GVDVVF   71 (280)
T ss_pred             EcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhc---------ccceeEEEeccccHHHHHHHhc--CCceEE
Confidence            7999999999999999999  79999998776522 11110         1334499999999999999999  999999


Q ss_pred             EcCCC---------------CcccHHHHHHhCC--CCCcEEEEeeceeeccC----------CCCCccC----ccccchh
Q 021331           78 DINGR---------------EADEVEPILDALP--NLEQFIYCSSAGVYLKS----------DLLPHCE----SRHKGKL  126 (314)
Q Consensus        78 ~~a~~---------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~----------~~~~~~e----~~~~~k~  126 (314)
                      |+|+.               |+.++++++++|.  +++||||+||.++++..          +..|+..    .|..+|.
T Consensus        72 H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~  151 (280)
T PF01073_consen   72 HTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKA  151 (280)
T ss_pred             EeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHH
Confidence            99875               4567999999998  89999999999988651          1122222    7999999


Q ss_pred             hHHHHHHhc---------CCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          127 NTESVLESK---------GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       127 ~~e~~~~~~---------~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      ++|+++.+.         .+..++|||+.||||++.. +.+.+...+..+......|++....+++|++|+|.+.+.+.+
T Consensus       152 ~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~-~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~  230 (280)
T PF01073_consen  152 LAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQR-LVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQ  230 (280)
T ss_pred             HHHHHHHhhcccccccccceeEEEEeccEEeCccccc-ccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHH
Confidence            999998532         2789999999999997533 445555666666555556888889999999999999987765


Q ss_pred             C---C----ccCCceEEecCCcccc-HHHHHHHHHHHhCCCCCeeeec
Q 021331          198 N---E----KASRQVFNISGEKYVT-FDGLARACAKAAGFPEPELVHY  237 (314)
Q Consensus       198 ~---~----~~~~~~~~i~~~~~~s-~~el~~~i~~~~g~~~~~~~~~  237 (314)
                      +   +    ...|+.|+|+++++++ +.||+..+.+.+|.+.+...+.
T Consensus       231 ~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~~~~l  278 (280)
T PF01073_consen  231 ALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPKSISL  278 (280)
T ss_pred             HhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCcccCC
Confidence            2   2    3478999999999999 9999999999999987664443

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.8e-32  Score=241.38  Aligned_cols=276  Identities=17%  Similarity=0.201  Sum_probs=194.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||+||||++++++|+++|++|++++|+.........     .+.. ..++.++.+|+.|.+.+.+++.  ++|+|||+|
T Consensus        16 tG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~A   87 (353)
T PLN02896         16 TGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLS-----KWKE-GDRLRLFRADLQEEGSFDEAVK--GCDGVFHVA   87 (353)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-----hhcc-CCeEEEEECCCCCHHHHHHHHc--CCCEEEECC
Confidence            7999999999999999999999999987644221110     0000 2468899999999999999998  899999999


Q ss_pred             CCCc-----------------------ccHHHHHHhCC---CCCcEEEEeeceeeccCCC-------------CCcc---
Q 021331           81 GREA-----------------------DEVEPILDALP---NLEQFIYCSSAGVYLKSDL-------------LPHC---  118 (314)
Q Consensus        81 ~~~~-----------------------~~~~~~~~~~~---~~~~~i~~Ss~~v~~~~~~-------------~~~~---  118 (314)
                      +...                       .++.+++++|.   ++++||++||..+|+....             .|..   
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~  167 (353)
T PLN02896         88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVW  167 (353)
T ss_pred             ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhh
Confidence            7521                       23567788875   3679999999999973210             1110   


Q ss_pred             ------CccccchhhHHHHHH----hcCCceEEEecCeeeCCCCCCchhHHHHHHHH---cCCCe--ecCCCC---Ccee
Q 021331          119 ------ESRHKGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK---AGRPI--PIPGSG---IQVT  180 (314)
Q Consensus       119 ------e~~~~~k~~~e~~~~----~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~---~~~~~--~~~~~~---~~~~  180 (314)
                            ..|+.+|..+|+++.    .++++++++||+.||||+.... ++.++..+.   .+...  ...+..   ...+
T Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  246 (353)
T PLN02896        168 NTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPS-VPSSIQVLLSPITGDSKLFSILSAVNSRMGSI  246 (353)
T ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCC-CCchHHHHHHHhcCCccccccccccccccCce
Confidence                  159999999999764    4689999999999999975422 122222222   23221  111111   1246


Q ss_pred             eeeeHHHHHHHHHHHhcCCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeec
Q 021331          181 QLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFAS  260 (314)
Q Consensus       181 ~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (314)
                      +|+|++|+|++++.++..+.. ++.|++ ++..+|+.|+++.+.+.++.....+...+ .         .... .+...|
T Consensus       247 dfi~v~Dva~a~~~~l~~~~~-~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~~~-~---------~~~~-~~~~~~  313 (353)
T PLN02896        247 ALVHIEDICDAHIFLMEQTKA-EGRYIC-CVDSYDMSELINHLSKEYPCSNIQVRLDE-E---------KRGS-IPSEIS  313 (353)
T ss_pred             eEEeHHHHHHHHHHHHhCCCc-CccEEe-cCCCCCHHHHHHHHHHhCCCCCccccccc-c---------ccCc-cccccC
Confidence            999999999999999987543 457865 56679999999999999974321111111 0         0111 123458


Q ss_pred             HHhHHhhcCCCcccChHHHHHHHHhhhhcCCCccCCCCC
Q 021331          261 VEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADF  299 (314)
Q Consensus       261 ~~k~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  299 (314)
                      ++|++ .|||.|+++++++|+++++|++.++.+++.+.+
T Consensus       314 ~~~~~-~lGw~p~~~l~~~i~~~~~~~~~~~~~~~~~~~  351 (353)
T PLN02896        314 SKKLR-DLGFEYKYGIEEIIDQTIDCCVDHGFLPQNRKL  351 (353)
T ss_pred             HHHHH-HcCCCccCCHHHHHHHHHHHHHHCCCCCccccc
Confidence            88887 499999999999999999999999887766543

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=3.9e-32  Score=237.24  Aligned_cols=272  Identities=20%  Similarity=0.265  Sum_probs=199.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||+|++|+++++.|+++|++|++++|+.+... .+.          ..+++++.+|+.|++++.++++  ++|+|||++
T Consensus         6 tG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~----------~~~~~~~~~D~~~~~~l~~~~~--~~d~vi~~a   72 (328)
T TIGR03466         6 TGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRR-NLE----------GLDVEIVEGDLRDPASLRKAVA--GCRALFHVA   72 (328)
T ss_pred             ECCccchhHHHHHHHHHCCCEEEEEEecCcccc-ccc----------cCCceEEEeeCCCHHHHHHHHh--CCCEEEEec
Confidence            799999999999999999999999999865522 111          1468899999999999999998  899999998


Q ss_pred             CCC--------------cccHHHHHHhCC--CCCcEEEEeeceeeccC-CCCCccC-----------ccccchhhHHHHH
Q 021331           81 GRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCE-----------SRHKGKLNTESVL  132 (314)
Q Consensus        81 ~~~--------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~-~~~~~~e-----------~~~~~k~~~e~~~  132 (314)
                      +..              ..++.++++++.  ++++||++||..+|+.. ...+.+|           .|+.+|..+|+++
T Consensus        73 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~  152 (328)
T TIGR03466        73 ADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAA  152 (328)
T ss_pred             eecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHH
Confidence            642              334677888776  67899999999999742 2222222           5888999999887


Q ss_pred             Hh----cCCceEEEecCeeeCCCCCCc-hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEE
Q 021331          133 ES----KGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN  207 (314)
Q Consensus       133 ~~----~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~  207 (314)
                      ++    ++++++++||+.+|||+.... ....++.....+..... .  +...+++|++|+|++++.++.++. .+..|+
T Consensus       153 ~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~i~v~D~a~a~~~~~~~~~-~~~~~~  228 (328)
T TIGR03466       153 LEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAY-V--DTGLNLVHVDDVAEGHLLALERGR-IGERYI  228 (328)
T ss_pred             HHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCcee-e--CCCcceEEHHHHHHHHHHHHhCCC-CCceEE
Confidence            54    589999999999999975422 12223333333332222 1  233689999999999999998754 567888


Q ss_pred             ecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccC--------C-CCcccC--------CCcceeecHHhHHhhcCC
Q 021331          208 ISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFG--------K-KKAFPF--------RDQHFFASVEKAKHVLGW  270 (314)
Q Consensus       208 i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~--------~-~~~~~~--------~~~~~~~~~~k~~~~lg~  270 (314)
                      ++ ++++|+.|+++.+.+.+|.+. .....|.+.....        . ....+.        ......+|++|+++.|||
T Consensus       229 ~~-~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~  306 (328)
T TIGR03466       229 LG-GENLTLKQILDKLAEITGRPA-PRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVRELGY  306 (328)
T ss_pred             ec-CCCcCHHHHHHHHHHHhCCCC-CCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHHcCC
Confidence            85 678999999999999999765 3333332211000        0 000111        123567899999999999


Q ss_pred             CcccChHHHHHHHHhhhhcCCC
Q 021331          271 KPEFDLVEGLADSYNLDFGRGT  292 (314)
Q Consensus       271 ~~~~~~~~~l~~~~~~~~~~~~  292 (314)
                      .|. +++++|+++++|++++|.
T Consensus       307 ~p~-~~~~~i~~~~~~~~~~~~  327 (328)
T TIGR03466       307 RQR-PAREALRDAVEWFRANGY  327 (328)
T ss_pred             CCc-CHHHHHHHHHHHHHHhCC
Confidence            996 999999999999988753

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=5.6e-32  Score=222.44  Aligned_cols=249  Identities=20%  Similarity=0.206  Sum_probs=208.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||++|.+|..|++.|. .+++|++++|..                          +|++|++.+.+++.+.+||+|||+|
T Consensus         6 ~G~~GqLG~~L~~~l~-~~~~v~a~~~~~--------------------------~Ditd~~~v~~~i~~~~PDvVIn~A   58 (281)
T COG1091           6 TGANGQLGTELRRALP-GEFEVIATDRAE--------------------------LDITDPDAVLEVIRETRPDVVINAA   58 (281)
T ss_pred             EcCCChHHHHHHHHhC-CCceEEeccCcc--------------------------ccccChHHHHHHHHhhCCCEEEECc
Confidence            7999999999999998 669999998774                          4899999999999988999999999


Q ss_pred             CC----------------CcccHHHHHHhCC-CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHHhc
Q 021331           81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLESK  135 (314)
Q Consensus        81 ~~----------------~~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~~~  135 (314)
                      +.                |..+..+++++|+ -..++||+||.+||++....|+.|        .|+++|+..|+.+++.
T Consensus        59 Ayt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~  138 (281)
T COG1091          59 AYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAA  138 (281)
T ss_pred             cccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHh
Confidence            87                3456788999998 456999999999998877666766        7999999999999999


Q ss_pred             CCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCcccc
Q 021331          136 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  215 (314)
Q Consensus       136 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s  215 (314)
                      +.+..|+|.+++||... .+|...+++....++++.+.  .++..++++..|+|+++..++..... +++||+++...+|
T Consensus       139 ~~~~~I~Rtswv~g~~g-~nFv~tml~la~~~~~l~vv--~Dq~gsPt~~~dlA~~i~~ll~~~~~-~~~yH~~~~g~~S  214 (281)
T COG1091         139 GPRHLILRTSWVYGEYG-NNFVKTMLRLAKEGKELKVV--DDQYGSPTYTEDLADAILELLEKEKE-GGVYHLVNSGECS  214 (281)
T ss_pred             CCCEEEEEeeeeecCCC-CCHHHHHHHHhhcCCceEEE--CCeeeCCccHHHHHHHHHHHHhcccc-CcEEEEeCCCccc
Confidence            99999999999999865 56777888888888888763  57889999999999999999987653 4499999999899


Q ss_pred             HHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHhh
Q 021331          216 FDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNL  286 (314)
Q Consensus       216 ~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~  286 (314)
                      |.|+++.|.+.++.+...........+..     ..-++.+..+++.|+++.+|+.|+ +|+++++++++.
T Consensus       215 wydfa~~I~~~~~~~~~v~~~~~~~~~~~-----~a~RP~~S~L~~~k~~~~~g~~~~-~w~~~l~~~~~~  279 (281)
T COG1091         215 WYEFAKAIFEEAGVDGEVIEPIASAEYPT-----PAKRPANSSLDTKKLEKAFGLSLP-EWREALKALLDE  279 (281)
T ss_pred             HHHHHHHHHHHhCCCccccccccccccCc-----cCCCCcccccchHHHHHHhCCCCc-cHHHHHHHHHhh
Confidence            99999999999997662222333221111     112345667899999999999998 999999998864

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=5.6e-32  Score=225.63  Aligned_cols=270  Identities=20%  Similarity=0.194  Sum_probs=199.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCccccc--CCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      ||||||||+++++.|+++||.|+++.|+++....  .+     .++++..++...+.+|+.|++++.++++  +||.|||
T Consensus        12 TGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L-----~~l~~a~~~l~l~~aDL~d~~sf~~ai~--gcdgVfH   84 (327)
T KOG1502|consen   12 TGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHL-----RKLEGAKERLKLFKADLLDEGSFDKAID--GCDGVFH   84 (327)
T ss_pred             eCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHH-----HhcccCcccceEEeccccccchHHHHHh--CCCEEEE
Confidence            7999999999999999999999999999987322  12     2333445679999999999999999999  9999999


Q ss_pred             cCCCC---------------cccHHHHHHhCC---CCCcEEEEeeceeeccC-----CCCCccC--------------cc
Q 021331           79 INGRE---------------ADEVEPILDALP---NLEQFIYCSSAGVYLKS-----DLLPHCE--------------SR  121 (314)
Q Consensus        79 ~a~~~---------------~~~~~~~~~~~~---~~~~~i~~Ss~~v~~~~-----~~~~~~e--------------~~  121 (314)
                      +|.+.               +.++.|++++|.   .++|||+.||..+....     ....++|              .|
T Consensus        85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y  164 (327)
T KOG1502|consen   85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWY  164 (327)
T ss_pred             eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHH
Confidence            98862               356899999998   48999999996554211     1122333              57


Q ss_pred             ccchhhHHHHH----HhcCCceEEEecCeeeCCCCCC--chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHH
Q 021331          122 HKGKLNTESVL----ESKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  195 (314)
Q Consensus       122 ~~~k~~~e~~~----~~~~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  195 (314)
                      ..+|..+|+..    ++.+++.+.+.|+.|+||....  +.....+-.+.+|..-..   .+....++|++|+|++.+.+
T Consensus       165 ~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~---~n~~~~~VdVrDVA~AHv~a  241 (327)
T KOG1502|consen  165 ALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETY---PNFWLAFVDVRDVALAHVLA  241 (327)
T ss_pred             HHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccC---CCCceeeEeHHHHHHHHHHH
Confidence            78888888875    5678999999999999997543  222334444455543322   22334599999999999999


Q ss_pred             hcCCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccC
Q 021331          196 LGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFD  275 (314)
Q Consensus       196 l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~  275 (314)
                      ++++... +.|.+.+.. +++.|+++.+.+.+....     ++...-     ............+++|++++.|+... +
T Consensus       242 ~E~~~a~-GRyic~~~~-~~~~ei~~~l~~~~P~~~-----ip~~~~-----~~~~~~~~~~~~~~~k~k~lg~~~~~-~  308 (327)
T KOG1502|consen  242 LEKPSAK-GRYICVGEV-VSIKEIADILRELFPDYP-----IPKKNA-----EEHEGFLTSFKVSSEKLKSLGGFKFR-P  308 (327)
T ss_pred             HcCcccC-ceEEEecCc-ccHHHHHHHHHHhCCCCC-----CCCCCC-----ccccccccccccccHHHHhcccceec-C
Confidence            9998754 688888765 669999999999888533     111110     00111223345799999885557777 9


Q ss_pred             hHHHHHHHHhhhhcCCCc
Q 021331          276 LVEGLADSYNLDFGRGTY  293 (314)
Q Consensus       276 ~~~~l~~~~~~~~~~~~~  293 (314)
                      +++.+.++++++++.+..
T Consensus       309 l~e~~~dt~~sl~~~~~l  326 (327)
T KOG1502|consen  309 LEETLSDTVESLREKGLL  326 (327)
T ss_pred             hHHHHHHHHHHHHHhcCC
Confidence            999999999999887643

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=6.5e-33  Score=240.47  Aligned_cols=264  Identities=16%  Similarity=0.196  Sum_probs=198.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||+|++++++|+++||+|++++|+.++.. .+.          ..+++++.+|++|++++.++++  ++|+|||++
T Consensus         6 tGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~-~l~----------~~~v~~v~~Dl~d~~~l~~al~--g~d~Vi~~~   72 (317)
T CHL00194          6 IGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS-FLK----------EWGAELVYGDLSLPETLPPSFK--GVTAIIDAS   72 (317)
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh-hHh----------hcCCEEEECCCCCHHHHHHHHC--CCCEEEECC
Confidence            799999999999999999999999999865421 111          1478999999999999999999  999999987


Q ss_pred             CCC-----------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCceEEEecCee
Q 021331           81 GRE-----------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYI  147 (314)
Q Consensus        81 ~~~-----------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~~~ilR~~~v  147 (314)
                      +..           ..++.+++++|.  +++|||++||.+..... ..    .|..+|..+|+++++++++++++||+.+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~~-~~----~~~~~K~~~e~~l~~~~l~~tilRp~~~  147 (317)
T CHL00194         73 TSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQYP-YI----PLMKLKSDIEQKLKKSGIPYTIFRLAGF  147 (317)
T ss_pred             CCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccccC-CC----hHHHHHHHHHHHHHHcCCCeEEEeecHH
Confidence            642           234678999987  88999999996542111 11    3677899999999999999999999988


Q ss_pred             eCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCccccHHHHHHHHHHHh
Q 021331          148 YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAA  227 (314)
Q Consensus       148 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~  227 (314)
                      |+.     +...+...+..+.+..+ +++++.++++|++|+|++++.++.++...+++||+++++.+|+.|+++.+.+.+
T Consensus       148 ~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~el~~~~~~~~  221 (317)
T CHL00194        148 FQG-----LISQYAIPILEKQPIWI-TNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSWNSSEIISLCEQLS  221 (317)
T ss_pred             hhh-----hhhhhhhhhccCCceEe-cCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCCccCHHHHHHHHHHHh
Confidence            864     12211222233444444 345667899999999999999998766678999999999999999999999999


Q ss_pred             CCCCCeeeecCCcccccCCC--------Cccc---------CCCcceeecHHhHHhhcCCCcc--cChHHHHHHHHhhhh
Q 021331          228 GFPEPELVHYNPKEFDFGKK--------KAFP---------FRDQHFFASVEKAKHVLGWKPE--FDLVEGLADSYNLDF  288 (314)
Q Consensus       228 g~~~~~~~~~~~~~~~~~~~--------~~~~---------~~~~~~~~~~~k~~~~lg~~~~--~~~~~~l~~~~~~~~  288 (314)
                      |++. .+.+.|.+...+...        ...+         ........+.+++.+.||+.|.  .++++++++.+...+
T Consensus       222 g~~~-~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~  300 (317)
T CHL00194        222 GQKA-KISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIFKIDPNELISLEDYFQEYFERIL  300 (317)
T ss_pred             CCCC-eEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhhhHHHHHHHHHHHHH
Confidence            9875 677777544422110        0000         0112344567789999999984  579999999887655


Q ss_pred             c
Q 021331          289 G  289 (314)
Q Consensus       289 ~  289 (314)
                      +
T Consensus       301 ~  301 (317)
T CHL00194        301 K  301 (317)
T ss_pred             H
Confidence            4

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=8.7e-32  Score=234.30  Aligned_cols=268  Identities=16%  Similarity=0.166  Sum_probs=190.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++++++|+++|++|+++.|+..........   ........+++++.+|++|++.+.++++  ++|+|||+|
T Consensus        11 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih~A   85 (322)
T PLN02986         11 TGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHL---LALDGAKERLKLFKADLLEESSFEQAIE--GCDAVFHTA   85 (322)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHH---HhccCCCCceEEEecCCCCcchHHHHHh--CCCEEEEeC
Confidence            79999999999999999999999999876542110000   0000012468899999999999999998  899999999


Q ss_pred             CCC---------------cccHHHHHHhCC---CCCcEEEEeeceee--ccCC---CCCc--------------cCcccc
Q 021331           81 GRE---------------ADEVEPILDALP---NLEQFIYCSSAGVY--LKSD---LLPH--------------CESRHK  123 (314)
Q Consensus        81 ~~~---------------~~~~~~~~~~~~---~~~~~i~~Ss~~v~--~~~~---~~~~--------------~e~~~~  123 (314)
                      +..               ..++.++++++.   +++|||++||.++|  +...   ..++              ...|+.
T Consensus        86 ~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~  165 (322)
T PLN02986         86 SPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPL  165 (322)
T ss_pred             CCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHH
Confidence            752               234667888875   46899999997654  3211   1111              124899


Q ss_pred             chhhHHHHHH----hcCCceEEEecCeeeCCCCCC--chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          124 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       124 ~k~~~e~~~~----~~~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      +|..+|.++.    +++++++++||+.+|||+...  .+...++..+..+...  ++  .+.++++|++|+|++++.++.
T Consensus       166 sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~~--~~~~~~v~v~Dva~a~~~al~  241 (322)
T PLN02986        166 SKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--FN--NRFYRFVDVRDVALAHIKALE  241 (322)
T ss_pred             HHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--CC--CcCcceeEHHHHHHHHHHHhc
Confidence            9999988764    468999999999999996432  2233444555555542  23  456799999999999999998


Q ss_pred             CCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChH
Q 021331          198 NEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLV  277 (314)
Q Consensus       198 ~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~  277 (314)
                      ++.. ++.||+++ +.+|+.|+++.+.+.++. . .+....+.         .........+|++|++. |||+|+ +++
T Consensus       242 ~~~~-~~~yni~~-~~~s~~e~~~~i~~~~~~-~-~~~~~~~~---------~~~~~~~~~~d~~~~~~-lg~~~~-~l~  306 (322)
T PLN02986        242 TPSA-NGRYIIDG-PIMSVNDIIDILRELFPD-L-CIADTNEE---------SEMNEMICKVCVEKVKN-LGVEFT-PMK  306 (322)
T ss_pred             Cccc-CCcEEEec-CCCCHHHHHHHHHHHCCC-C-CCCCCCcc---------ccccccCCccCHHHHHH-cCCccc-CHH
Confidence            8654 45899954 579999999999999873 1 11110000         00011112478899865 999998 999


Q ss_pred             HHHHHHHhhhhcCCC
Q 021331          278 EGLADSYNLDFGRGT  292 (314)
Q Consensus       278 ~~l~~~~~~~~~~~~  292 (314)
                      ++++++++|++..|.
T Consensus       307 e~~~~~~~~~~~~~~  321 (322)
T PLN02986        307 SSLRDTILSLKEKCL  321 (322)
T ss_pred             HHHHHHHHHHHHcCC
Confidence            999999999988764

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=5.2e-32  Score=222.01  Aligned_cols=276  Identities=25%  Similarity=0.308  Sum_probs=213.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||+||||+|.+.+|+++||.|++++.-.......+..  .+.+..-..++.++++|++|.+.|+++|++..+|.|+|+|
T Consensus         8 tGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r--~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~Hfa   85 (343)
T KOG1371|consen    8 TGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKR--VRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVMHFA   85 (343)
T ss_pred             ecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHH--HHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEEeeh
Confidence            79999999999999999999999998654332111110  0011111378999999999999999999999999999998


Q ss_pred             CC----------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC---------ccccchhhHHHHHH
Q 021331           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE---------SRHKGKLNTESVLE  133 (314)
Q Consensus        81 ~~----------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e---------~~~~~k~~~e~~~~  133 (314)
                      +.                |..++.++++.|.  +++.+||.||+.+||.+...|++|         .|+++|..+|+++.
T Consensus        86 ~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~  165 (343)
T KOG1371|consen   86 ALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIH  165 (343)
T ss_pred             hhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHHHHH
Confidence            86                4567899999998  899999999999999887777666         79999999999986


Q ss_pred             h----cCCceEEEecCeeeC--CCC---------CCchhHHHHHHHH--------cCCCeecCCCCCceeeeeeHHHHHH
Q 021331          134 S----KGVNWTSLRPVYIYG--PLN---------YNPVEEWFFHRLK--------AGRPIPIPGSGIQVTQLGHVKDLAR  190 (314)
Q Consensus       134 ~----~~~~~~ilR~~~v~g--~~~---------~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~i~~~D~a~  190 (314)
                      .    .++.++.||.+.++|  |..         .....+....-+.        -+++... .+++..++++|+-|.|+
T Consensus       166 d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t-~dgt~vrdyi~v~Dla~  244 (343)
T KOG1371|consen  166 DYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTT-IDGTIVRDYIHVLDLAD  244 (343)
T ss_pred             hhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccc-cCCCeeecceeeEehHH
Confidence            4    458899999999999  321         1112221111111        1233333 24588999999999999


Q ss_pred             HHHHHhcCCc--cCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhc
Q 021331          191 AFVQVLGNEK--ASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVL  268 (314)
Q Consensus       191 ~~~~~l~~~~--~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l  268 (314)
                      ....++.+..  ..-++||++.+...+..+|..+++++.|... ++..++.          ++......+.+.+++.++|
T Consensus       245 ~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~-k~~~v~~----------R~gdv~~~ya~~~~a~~el  313 (343)
T KOG1371|consen  245 GHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKI-KKKVVPR----------RNGDVAFVYANPSKAQREL  313 (343)
T ss_pred             HHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCC-CccccCC----------CCCCceeeeeChHHHHHHh
Confidence            9999998744  2345999999999999999999999999876 3322221          3445678888999999999


Q ss_pred             CCCcccChHHHHHHHHhhhhcC
Q 021331          269 GWKPEFDLVEGLADSYNLDFGR  290 (314)
Q Consensus       269 g~~~~~~~~~~l~~~~~~~~~~  290 (314)
                      ||+|.+.+++.++++.+|+.+.
T Consensus       314 gwk~~~~iee~c~dlw~W~~~n  335 (343)
T KOG1371|consen  314 GWKAKYGLQEMLKDLWRWQKQN  335 (343)
T ss_pred             CCccccCHHHHHHHHHHHHhcC
Confidence            9999999999999999998774

>PRK05865 hypothetical protein; Provisional

Probab=99.98  E-value=7.3e-31  Score=247.15  Aligned_cols=248  Identities=22%  Similarity=0.267  Sum_probs=187.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||+|+++++.|+++|++|++++|+....   .           ..++.++.+|++|.+.+.++++  ++|+|||+|
T Consensus         6 TGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~-----------~~~v~~v~gDL~D~~~l~~al~--~vD~VVHlA   69 (854)
T PRK05865          6 TGASGVLGRGLTARLLSQGHEVVGIARHRPDS---W-----------PSSADFIAADIRDATAVESAMT--GADVVAHCA   69 (854)
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---c-----------ccCceEEEeeCCCHHHHHHHHh--CCCEEEECC
Confidence            79999999999999999999999999875331   1           1357889999999999999998  899999999


Q ss_pred             CC-------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCceEEEecCeeeCCC
Q 021331           81 GR-------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPL  151 (314)
Q Consensus        81 ~~-------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~~~ilR~~~v~g~~  151 (314)
                      +.       |..++.+++++|.  ++++||++||..                 |..+|+++.+++++++++||+++|||+
T Consensus        70 a~~~~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~-----------------K~aaE~ll~~~gl~~vILRp~~VYGP~  132 (854)
T PRK05865         70 WVRGRNDHINIDGTANVLKAMAETGTGRIVFTSSGH-----------------QPRVEQMLADCGLEWVAVRCALIFGRN  132 (854)
T ss_pred             CcccchHHHHHHHHHHHHHHHHHcCCCeEEEECCcH-----------------HHHHHHHHHHcCCCEEEEEeceEeCCC
Confidence            75       3456788999987  778999999853                 788999998899999999999999995


Q ss_pred             CCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCccccHHHHHHHHHHHhCCCC
Q 021331          152 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPE  231 (314)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  231 (314)
                      .     ..++..+.. .++...|.+++.++|+|++|+|++++.++.++...+++||+++++.+|+.|+++.+.+.... .
T Consensus       133 ~-----~~~i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~EIae~l~~~~~~-v  205 (854)
T PRK05865        133 V-----DNWVQRLFA-LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALGRPMVP-I  205 (854)
T ss_pred             h-----HHHHHHHhc-CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcccHHHHHHHHhhhhcc-C
Confidence            2     222333322 22222345566789999999999999998755445679999999999999999998874321 0


Q ss_pred             CeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHhhhhcCCCc
Q 021331          232 PELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTY  293 (314)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~  293 (314)
                      +...  .   ...+.............+|++|+++.|||.|+++++++|+++++|++.+-.+
T Consensus       206 ~~~~--~---~~~~~~~~~~~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~ri~~  262 (854)
T PRK05865        206 GSPV--L---RRVTSFAELELLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRGRIGL  262 (854)
T ss_pred             Cchh--h---hhccchhhhhcccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhccc
Confidence            0000  0   0001000011112344679999999999999999999999999999875333

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.97  E-value=4.9e-30  Score=213.56  Aligned_cols=199  Identities=33%  Similarity=0.477  Sum_probs=169.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||+|++++++|+++|+.|+.+.|+.........          ..++.++.+|+.|.+.+.++++..++|+|||+|
T Consensus         4 ~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~----------~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a   73 (236)
T PF01370_consen    4 TGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEK----------KLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLA   73 (236)
T ss_dssp             ETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHH----------HTTEEEEESETTSHHHHHHHHHHHTESEEEEEB
T ss_pred             EccCCHHHHHHHHHHHHcCCccccccccccccccccc----------cceEEEEEeeccccccccccccccCceEEEEee
Confidence            6999999999999999999999999988776321110          127899999999999999999977789999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHH-
Q 021331           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLE-  133 (314)
Q Consensus        81 ~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~-  133 (314)
                      +..                ...+.+++++|.  ++++||++||..+|+.....++.|        .|+.+|..+|++++ 
T Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~  153 (236)
T PF01370_consen   74 AFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRD  153 (236)
T ss_dssp             SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            873                234678888888  778999999999999775555444        58899999999885 


Q ss_pred             ---hcCCceEEEecCeeeCCC----CCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceE
Q 021331          134 ---SKGVNWTSLRPVYIYGPL----NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  206 (314)
Q Consensus       134 ---~~~~~~~ilR~~~v~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~  206 (314)
                         +++++++++||+.+|||+    ....++..++.++..++++.+++++++.++++|++|+|++++.+++++...+++|
T Consensus       154 ~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~y  233 (236)
T PF01370_consen  154 YAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIY  233 (236)
T ss_dssp             HHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEE
T ss_pred             cccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEE
Confidence               358999999999999998    4567888999999999989888999999999999999999999999987678999


Q ss_pred             Eec
Q 021331          207 NIS  209 (314)
Q Consensus       207 ~i~  209 (314)
                      ||+
T Consensus       234 Nig  236 (236)
T PF01370_consen  234 NIG  236 (236)
T ss_dssp             EES
T ss_pred             EeC
Confidence            985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.97  E-value=3.9e-29  Score=212.76  Aligned_cols=279  Identities=22%  Similarity=0.269  Sum_probs=213.9

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcccc--cCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIA--QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~v   76 (314)
                      |||+||+|.+|+++|++++  .+|++++..+....  ....+.       ....+.++.+|+.|...+.+++.  ++ .|
T Consensus        10 tGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~-------~~~~v~~~~~D~~~~~~i~~a~~--~~-~V   79 (361)
T KOG1430|consen   10 TGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF-------RSGRVTVILGDLLDANSISNAFQ--GA-VV   79 (361)
T ss_pred             ECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc-------cCCceeEEecchhhhhhhhhhcc--Cc-eE
Confidence            7999999999999999998  89999998775211  110000       13689999999999999999998  88 77


Q ss_pred             EEcCCC----------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCC-------CCCccC----ccccchhh
Q 021331           77 YDINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSD-------LLPHCE----SRHKGKLN  127 (314)
Q Consensus        77 i~~a~~----------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~-------~~~~~e----~~~~~k~~  127 (314)
                      +|+++.                |+.+|.+++++|.  +++++||+||++|.....       ..|++.    .|+.+|..
T Consensus        80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~  159 (361)
T KOG1430|consen   80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKAL  159 (361)
T ss_pred             EEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHH
Confidence            777653                5678999999998  999999999999975332       122222    79999999


Q ss_pred             HHHHHHhcC----CceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc-----C
Q 021331          128 TESVLESKG----VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG-----N  198 (314)
Q Consensus       128 ~e~~~~~~~----~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~-----~  198 (314)
                      +|+++++.+    +..+.|||+.||||++. .+.+.+...+..+......++++...++++++.++.+.+.+..     .
T Consensus       160 aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~-~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~  238 (361)
T KOG1430|consen  160 AEKLVLEANGSDDLYTCALRPPGIYGPGDK-RLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKS  238 (361)
T ss_pred             HHHHHHHhcCCCCeeEEEEccccccCCCCc-cccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcC
Confidence            999987543    78999999999999753 3566777778888877766888888999999988877655432     2


Q ss_pred             CccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCccccc------------CCCC--c----ccCCCcceeec
Q 021331          199 EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDF------------GKKK--A----FPFRDQHFFAS  260 (314)
Q Consensus       199 ~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~------------~~~~--~----~~~~~~~~~~~  260 (314)
                      +...|+.|+|++++++...+++..+.+.+|...+....+|.....+            ++..  .    ........+.+
T Consensus       239 ~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~~~~~~f~  318 (361)
T KOG1430|consen  239 PSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVALLGVTRTFS  318 (361)
T ss_pred             CccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheeeeccccccC
Confidence            4458999999999999999999999999998875445555432211            1100  0    01112466789


Q ss_pred             HHhHHhhcCCCcccChHHHHHHHHhhhhcC
Q 021331          261 VEKAKHVLGWKPEFDLVEGLADSYNLDFGR  290 (314)
Q Consensus       261 ~~k~~~~lg~~~~~~~~~~l~~~~~~~~~~  290 (314)
                      ..|+++.|||.|..++++++.+++.|....
T Consensus       319 ~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~  348 (361)
T KOG1430|consen  319 IEKAKRELGYKPLVSLEEAIQRTIHWVASE  348 (361)
T ss_pred             HHHHHHhhCCCCcCCHHHHHHHHHHHHhhh
Confidence            999999999999999999999999975443

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.97  E-value=6.9e-30  Score=221.92  Aligned_cols=247  Identities=16%  Similarity=0.220  Sum_probs=187.3

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      |||+||||+++++.|+++|  ++|++++|+...... +..    .+.  ..++.++.+|++|++.+.++++  ++|+|||
T Consensus        10 TGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~-~~~----~~~--~~~~~~v~~Dl~d~~~l~~~~~--~iD~Vih   80 (324)
T TIGR03589        10 TGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWE-MQQ----KFP--APCLRFFIGDVRDKERLTRALR--GVDYVVH   80 (324)
T ss_pred             eCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHH-HHH----HhC--CCcEEEEEccCCCHHHHHHHHh--cCCEEEE
Confidence            7999999999999999986  789999887543211 000    000  1468899999999999999998  8999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHH-------
Q 021331           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLE-------  133 (314)
Q Consensus        79 ~a~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~-------  133 (314)
                      +|+..                ..++.++++++.  ++++||++||...+.     |. ..|+.+|..+|.+++       
T Consensus        81 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~-----p~-~~Y~~sK~~~E~l~~~~~~~~~  154 (324)
T TIGR03589        81 AAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAAN-----PI-NLYGATKLASDKLFVAANNISG  154 (324)
T ss_pred             CcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCC-----CC-CHHHHHHHHHHHHHHHHHhhcc
Confidence            99852                234678888877  678999999965431     22 259999999999874       


Q ss_pred             hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCC-CeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCc
Q 021331          134 SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK  212 (314)
Q Consensus       134 ~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~  212 (314)
                      .++++++++||+.||||+.  .+++.+...+..+. ++++ +++.+.++|+|++|+|++++.++++.. .+++|+ +++.
T Consensus       155 ~~gi~~~~lR~g~v~G~~~--~~i~~~~~~~~~~~~~~~i-~~~~~~r~~i~v~D~a~a~~~al~~~~-~~~~~~-~~~~  229 (324)
T TIGR03589       155 SKGTRFSVVRYGNVVGSRG--SVVPFFKSLKEEGVTELPI-TDPRMTRFWITLEQGVNFVLKSLERML-GGEIFV-PKIP  229 (324)
T ss_pred             ccCcEEEEEeecceeCCCC--CcHHHHHHHHHhCCCCeee-CCCCceEeeEEHHHHHHHHHHHHhhCC-CCCEEc-cCCC
Confidence            3589999999999999863  46677777766665 5666 467788999999999999999998753 467784 5556


Q ss_pred             cccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCC-CcceeecHHhHHhhcCCCcccChHHHHHH
Q 021331          213 YVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFR-DQHFFASVEKAKHVLGWKPEFDLVEGLAD  282 (314)
Q Consensus       213 ~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~k~~~~lg~~~~~~~~~~l~~  282 (314)
                      .+++.|+++.+.+..+..   ....            ++.. .....+|.+|++++|||.|+++++++++.
T Consensus       230 ~~sv~el~~~i~~~~~~~---~~~~------------~~g~~~~~~~~~~~~~~~~lg~~~~~~l~~~~~~  285 (324)
T TIGR03589       230 SMKITDLAEAMAPECPHK---IVGI------------RPGEKLHEVMITEDDARHTYELGDYYAILPSISF  285 (324)
T ss_pred             cEEHHHHHHHHHhhCCee---EeCC------------CCCchhHhhhcChhhhhhhcCCCCeEEEcccccc
Confidence            799999999999865421   1111            1111 13355799999999999999999999874

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02686 cinnamoyl-CoA reductase

Probab=99.96  E-value=4.8e-29  Score=219.93  Aligned_cols=254  Identities=19%  Similarity=0.240  Sum_probs=180.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh---ccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      |||+||||+++++.|+++|++|+++.|+.+.... +...  ....+   ...++.++.+|++|++.+.++++  ++|.||
T Consensus        59 TGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~-l~~l--~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~--~~d~V~  133 (367)
T PLN02686         59 TGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEK-LREM--EMFGEMGRSNDGIWTVMANLTEPESLHEAFD--GCAGVF  133 (367)
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHH--hhhccccccCCceEEEEcCCCCHHHHHHHHH--hccEEE
Confidence            7999999999999999999999998887543211 0000  00000   01357889999999999999998  899999


Q ss_pred             EcCCC----------------CcccHHHHHHhCC---CCCcEEEEeec--eeeccC--CC--CCccC-------------
Q 021331           78 DINGR----------------EADEVEPILDALP---NLEQFIYCSSA--GVYLKS--DL--LPHCE-------------  119 (314)
Q Consensus        78 ~~a~~----------------~~~~~~~~~~~~~---~~~~~i~~Ss~--~v~~~~--~~--~~~~e-------------  119 (314)
                      |+++.                +..++.+++++|.   ++++|||+||.  .+|+..  ..  .++.|             
T Consensus       134 hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~  213 (367)
T PLN02686        134 HTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNK  213 (367)
T ss_pred             ecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhccccc
Confidence            99764                1234778999975   58899999995  466531  11  11111             


Q ss_pred             -ccccchhhHHHHHH----hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHH
Q 021331          120 -SRHKGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       120 -~~~~~k~~~e~~~~----~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                       .|+.+|..+|.++.    .++++++++||++||||+........++ .+..+. ..+++++.  ++++|++|+|++++.
T Consensus       214 ~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~-~~~~g~-~~~~g~g~--~~~v~V~Dva~A~~~  289 (367)
T PLN02686        214 LWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATI-AYLKGA-QEMLADGL--LATADVERLAEAHVC  289 (367)
T ss_pred             chHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHH-HHhcCC-CccCCCCC--cCeEEHHHHHHHHHH
Confidence             58999999999874    4689999999999999975322111222 333443 44545443  579999999999999


Q ss_pred             HhcCC--ccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCc
Q 021331          195 VLGNE--KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKP  272 (314)
Q Consensus       195 ~l~~~--~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~  272 (314)
                      +++.+  ...+++| +++++.+++.|+++.+.+.+|.+. .....+..         .+.....+.+|++|++++|||.|
T Consensus       290 al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~-~~~~~~~~---------~~~d~~~~~~d~~kl~~~l~~~~  358 (367)
T PLN02686        290 VYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPI-NKIAGNSS---------SDDTPARFELSNKKLSRLMSRTR  358 (367)
T ss_pred             HHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCC-CcCCCchh---------hcCCcccccccHHHHHHHHHHhh
Confidence            99752  2345688 778888999999999999999764 22211110         02345677889999999999999


Q ss_pred             cc
Q 021331          273 EF  274 (314)
Q Consensus       273 ~~  274 (314)
                      +-
T Consensus       359 ~~  360 (367)
T PLN02686        359 RC  360 (367)
T ss_pred             hc
Confidence            73

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.96  E-value=1.2e-28  Score=211.82  Aligned_cols=253  Identities=25%  Similarity=0.256  Sum_probs=171.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||+++++.|+++|++|++++|+.........           ..    ..|... ..+.+.+.  ++|+|||++
T Consensus         4 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~----~~~~~~-~~~~~~~~--~~D~Vvh~a   65 (292)
T TIGR01777         4 TGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-----------EG----YKPWAP-LAESEALE--GADAVINLA   65 (292)
T ss_pred             EcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-----------ee----eecccc-cchhhhcC--CCCEEEECC
Confidence            7999999999999999999999999998766321110           11    112222 34455666  899999999


Q ss_pred             CCC------------------cccHHHHHHhCC--CC--CcEEEEeeceeeccCCCCCccCc--------cccchhhHHH
Q 021331           81 GRE------------------ADEVEPILDALP--NL--EQFIYCSSAGVYLKSDLLPHCES--------RHKGKLNTES  130 (314)
Q Consensus        81 ~~~------------------~~~~~~~~~~~~--~~--~~~i~~Ss~~v~~~~~~~~~~e~--------~~~~k~~~e~  130 (314)
                      +..                  ..++++++++|.  ++  .+||+.|+.++|+.....++.|.        +...+...|.
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~  145 (292)
T TIGR01777        66 GEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEE  145 (292)
T ss_pred             CCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHH
Confidence            752                  334778888887  44  35666777788986544444441        1222333444


Q ss_pred             HH---HhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEE
Q 021331          131 VL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN  207 (314)
Q Consensus       131 ~~---~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~  207 (314)
                      .+   ++.+++++++||+.+|||+.  .....+........... +++++..++++|++|+|++++.+++++.. +++||
T Consensus       146 ~~~~~~~~~~~~~ilR~~~v~G~~~--~~~~~~~~~~~~~~~~~-~g~~~~~~~~i~v~Dva~~i~~~l~~~~~-~g~~~  221 (292)
T TIGR01777       146 AAQAAEDLGTRVVLLRTGIVLGPKG--GALAKMLPPFRLGLGGP-LGSGRQWFSWIHIEDLVQLILFALENASI-SGPVN  221 (292)
T ss_pred             HhhhchhcCCceEEEeeeeEECCCc--chhHHHHHHHhcCcccc-cCCCCcccccEeHHHHHHHHHHHhcCccc-CCceE
Confidence            33   34679999999999999953  22333332222211112 36778899999999999999999987653 56999


Q ss_pred             ecCCccccHHHHHHHHHHHhCCCCCeeeecCCccccc--CCCCcccCCCcceeecHHhHHhhcCCCcccC-hHHHH
Q 021331          208 ISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDF--GKKKAFPFRDQHFFASVEKAKHVLGWKPEFD-LVEGL  280 (314)
Q Consensus       208 i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~-~~~~l  280 (314)
                      +++++++|+.|+++.+.+.+|.+.  ....|.+....  +..+.  ........+++|+++ +||+|+++ +++++
T Consensus       222 ~~~~~~~s~~di~~~i~~~~g~~~--~~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~  292 (292)
T TIGR01777       222 ATAPEPVRNKEFAKALARALHRPA--FFPVPAFVLRALLGEMAD--LLLKGQRVLPEKLLE-AGFQFQYPDLDEAL  292 (292)
T ss_pred             ecCCCccCHHHHHHHHHHHhCCCC--cCcCCHHHHHHHhchhhH--HHhCCcccccHHHHh-cCCeeeCcChhhcC
Confidence            999999999999999999999754  22344433221  11111  112345567889875 99999994 88764

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.96  E-value=1.6e-27  Score=185.01  Aligned_cols=252  Identities=19%  Similarity=0.261  Sum_probs=196.4

Q ss_pred             CCcccccHHHHHHHHHHCCC--eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      ||++|.+|+++.+.+..+|.  +-.++.-+.                         .+|+++.++.+.+|..+.|..|||
T Consensus         7 tGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk-------------------------d~DLt~~a~t~~lF~~ekPthVIh   61 (315)
T KOG1431|consen    7 TGGTGLVGSAIVKVVQEQGFDDENWVFIGSK-------------------------DADLTNLADTRALFESEKPTHVIH   61 (315)
T ss_pred             ecCCchHHHHHHHHHHhcCCCCcceEEeccc-------------------------cccccchHHHHHHHhccCCceeee
Confidence            79999999999999999875  333333222                         358999999999999999999999


Q ss_pred             cCCC-----------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC-------------ccccchh
Q 021331           79 INGR-----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE-------------SRHKGKL  126 (314)
Q Consensus        79 ~a~~-----------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e-------------~~~~~k~  126 (314)
                      +|+.                 |.....|++..|.  ++++++++.|.++|.+....|++|             .|..+|+
T Consensus        62 lAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr  141 (315)
T KOG1431|consen   62 LAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKR  141 (315)
T ss_pred             hHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHH
Confidence            9875                 2333567888876  899999999999998877777777             5666776


Q ss_pred             hHHH----HHHhcCCceEEEecCeeeCCCCC-----CchhHHHHHHHH----cCC-CeecCCCCCceeeeeeHHHHHHHH
Q 021331          127 NTES----VLESKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLK----AGR-PIPIPGSGIQVTQLGHVKDLARAF  192 (314)
Q Consensus       127 ~~e~----~~~~~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~i~~~D~a~~~  192 (314)
                      ++.-    +..++|..++.+-|.++|||.+.     +.+++.++.+..    .+. .+.+||.|...++|+|.+|+|+++
T Consensus       142 ~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~  221 (315)
T KOG1431|consen  142 MIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLF  221 (315)
T ss_pred             HHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHH
Confidence            5533    34578999999999999999742     346777776652    333 678999999999999999999999


Q ss_pred             HHHhcCCccCCceEEecCCc--cccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCC
Q 021331          193 VQVLGNEKASRQVFNISGEK--YVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGW  270 (314)
Q Consensus       193 ~~~l~~~~~~~~~~~i~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~  270 (314)
                      +.++.+=. .-+-++++.++  .+|++|+++++.++++...........++           -...-.+|++|++. |+|
T Consensus       222 i~vlr~Y~-~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK~D-----------Gq~kKtasnsKL~s-l~p  288 (315)
T KOG1431|consen  222 IWVLREYE-GVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTKSD-----------GQFKKTASNSKLRS-LLP  288 (315)
T ss_pred             HHHHHhhc-CccceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccCCC-----------CCcccccchHHHHH-hCC
Confidence            99998633 34567777777  69999999999999998773332222111           12344589999987 999


Q ss_pred             CcccC-hHHHHHHHHhhhhcC
Q 021331          271 KPEFD-LVEGLADSYNLDFGR  290 (314)
Q Consensus       271 ~~~~~-~~~~l~~~~~~~~~~  290 (314)
                      .|+++ +++++.++++||.+.
T Consensus       289 d~~ft~l~~ai~~t~~Wy~~N  309 (315)
T KOG1431|consen  289 DFKFTPLEQAISETVQWYLDN  309 (315)
T ss_pred             CcccChHHHHHHHHHHHHHHh
Confidence            99986 999999999999873

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.96  E-value=2.2e-27  Score=190.74  Aligned_cols=255  Identities=25%  Similarity=0.301  Sum_probs=177.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||||+||++|+..|.+.||+|++++|++......+.           ..+.       .-+.+.+... -++|+|||+|
T Consensus         4 TGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~-----------~~v~-------~~~~~~~~~~-~~~DavINLA   64 (297)
T COG1090           4 TGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-----------PNVT-------LWEGLADALT-LGIDAVINLA   64 (297)
T ss_pred             eccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC-----------cccc-------ccchhhhccc-CCCCEEEECC
Confidence            7999999999999999999999999999887543332           1221       2233444432 1699999999


Q ss_pred             CCCccc------------------HHHHHHhC---C-CCCcEEEEeeceeeccCCCCCccCccc-----cch--hhHHHH
Q 021331           81 GREADE------------------VEPILDAL---P-NLEQFIYCSSAGVYLKSDLLPHCESRH-----KGK--LNTESV  131 (314)
Q Consensus        81 ~~~~~~------------------~~~~~~~~---~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~-----~~k--~~~e~~  131 (314)
                      |.++..                  |+.+.++.   . +.+.+|..|..+.||......++|.-.     .++  ..-|+.
T Consensus        65 G~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~  144 (297)
T COG1090          65 GEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEE  144 (297)
T ss_pred             CCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHH
Confidence            986432                  45555553   3 667788888899999988777777211     111  112333


Q ss_pred             H---HhcCCceEEEecCeeeCCCCCCchhHHHHHHHH--cCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceE
Q 021331          132 L---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK--AGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  206 (314)
Q Consensus       132 ~---~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~  206 (314)
                      .   +..|.+++++|.|.|.++.  ..++..|....+  .|.++   |+|.+..+|||++|++++|..++++... .+.|
T Consensus       145 a~~a~~~gtRvvllRtGvVLs~~--GGaL~~m~~~fk~glGG~~---GsGrQ~~SWIhieD~v~~I~fll~~~~l-sGp~  218 (297)
T COG1090         145 ALQAQQLGTRVVLLRTGVVLSPD--GGALGKMLPLFKLGLGGKL---GSGRQWFSWIHIEDLVNAILFLLENEQL-SGPF  218 (297)
T ss_pred             HhhhhhcCceEEEEEEEEEecCC--CcchhhhcchhhhccCCcc---CCCCceeeeeeHHHHHHHHHHHHhCcCC-CCcc
Confidence            2   3458899999999999974  233443333222  33333   9999999999999999999999999764 4599


Q ss_pred             EecCCccccHHHHHHHHHHHhCCCCCeeeecCCccc--ccCCCCcccCCCcceeecHHhHHhhcCCCccc-ChHHHHHHH
Q 021331          207 NISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEF--DFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF-DLVEGLADS  283 (314)
Q Consensus       207 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~-~~~~~l~~~  283 (314)
                      |++++.|++.++|.+.+.++++++.  ...+|....  .+|.....-  -..+..=..|+.+ .||.++| ++++++.+.
T Consensus       219 N~taP~PV~~~~F~~al~r~l~RP~--~~~vP~~~~rl~LGe~a~~l--L~gQrvlP~kl~~-aGF~F~y~dl~~AL~~i  293 (297)
T COG1090         219 NLTAPNPVRNKEFAHALGRALHRPA--ILPVPSFALRLLLGEMADLL--LGGQRVLPKKLEA-AGFQFQYPDLEEALADI  293 (297)
T ss_pred             cccCCCcCcHHHHHHHHHHHhCCCc--cccCcHHHHHHHhhhhHHHH--hccchhhHHHHHH-CCCeeecCCHHHHHHHH
Confidence            9999999999999999999999865  333443322  234332221  1122223456654 7999997 599999998


Q ss_pred             Hh
Q 021331          284 YN  285 (314)
Q Consensus       284 ~~  285 (314)
                      +.
T Consensus       294 l~  295 (297)
T COG1090         294 LK  295 (297)
T ss_pred             Hh
Confidence            75

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.2e-27  Score=225.62  Aligned_cols=279  Identities=18%  Similarity=0.183  Sum_probs=193.9

Q ss_pred             CCcccccHHHHHHHHH--HCCCeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecCCCh------hhHHHhhhcC
Q 021331            1 MGGTRFIGVFLSRLLV--KEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDY------DFVKSSLSAK   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~------~~l~~~~~~~   71 (314)
                      ||||||||++|++.|+  +.|++|++++|+.....  +..    ..... ..+++++.+|++|+      +.+.++ .  
T Consensus         6 TGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~--~~~----~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~--   76 (657)
T PRK07201          6 TGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSR--LEA----LAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-G--   76 (657)
T ss_pred             eCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHH--HHH----HHHhcCCCcEEEEecccCCccCCcCHHHHHHh-c--
Confidence            7999999999999999  47899999999653311  000    00000 14689999999984      345554 5  


Q ss_pred             CccEEEEcCCC-------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCC----------CccCccccchh
Q 021331           72 GFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLL----------PHCESRHKGKL  126 (314)
Q Consensus        72 ~~d~vi~~a~~-------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~----------~~~e~~~~~k~  126 (314)
                      ++|+|||+|+.             |..++.+++++|.  ++++|||+||..+|+.....          .....|+.+|.
T Consensus        77 ~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~  156 (657)
T PRK07201         77 DIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKF  156 (657)
T ss_pred             CCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhcCCCCchHHHHH
Confidence            89999999974             3456888999987  68899999999998743211          01125999999


Q ss_pred             hHHHHHH-hcCCceEEEecCeeeCCCCCCc--------hhHHHHHHHHcC-CCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          127 NTESVLE-SKGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       127 ~~e~~~~-~~~~~~~ilR~~~v~g~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      .+|++++ ..+++++++||+.||||.....        ++..++..+... ..+++++.+....+++|++|+++++..++
T Consensus       157 ~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~  236 (657)
T PRK07201        157 EAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLM  236 (657)
T ss_pred             HHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHh
Confidence            9999987 4689999999999999853211        111222222111 22334455566789999999999999998


Q ss_pred             cCCccCCceEEecCCccccHHHHHHHHHHHhCCCCC--eeeecCCcccccCCC--------------------CcccCCC
Q 021331          197 GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEP--ELVHYNPKEFDFGKK--------------------KAFPFRD  254 (314)
Q Consensus       197 ~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~--~~~~~~~~~~~~~~~--------------------~~~~~~~  254 (314)
                      ..+...+++||+++++++|+.|+++.+.+.+|.+..  ....+|.........                    .......
T Consensus       237 ~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  316 (657)
T PRK07201        237 HKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAVATQLGIPPEVLDFVN  316 (657)
T ss_pred             cCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHHHHhcCCCHHHHHhcc
Confidence            876556889999999999999999999999997640  112233211110000                    0011123


Q ss_pred             cceeecHHhHHhhc---CCCcccChHHHHHHHHhhhhc
Q 021331          255 QHFFASVEKAKHVL---GWKPEFDLVEGLADSYNLDFG  289 (314)
Q Consensus       255 ~~~~~~~~k~~~~l---g~~~~~~~~~~l~~~~~~~~~  289 (314)
                      .....|+.++++.|   |+... ++.+.+...++|+..
T Consensus       317 ~~~~f~~~~~~~~L~~~~~~~p-~~~~~~~~~~~~~~~  353 (657)
T PRK07201        317 YPTTFDSRETRAALKGSGIEVP-RLASYAPRLWDYWER  353 (657)
T ss_pred             CCCeeccHHHHHHhccCCcCCC-ChHHHHHHHHHHHHh
Confidence            45678899999988   55555 788999888876554

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.96  E-value=1.5e-27  Score=211.62  Aligned_cols=226  Identities=21%  Similarity=0.224  Sum_probs=175.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC--CccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~--~~d~vi~   78 (314)
                      |||||+||++++++|+++|++|++++|+.........   .........+++++.+|++|++++.++++..  ++|+|||
T Consensus        66 tGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~---~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D~Vi~  142 (390)
T PLN02657         66 VGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNG---KEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPVDVVVS  142 (390)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccch---hhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCCcEEEE
Confidence            7999999999999999999999999998754211000   0001111257899999999999999999844  5999999


Q ss_pred             cCCCC-----------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHh--cCCceEEEe
Q 021331           79 INGRE-----------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLES--KGVNWTSLR  143 (314)
Q Consensus        79 ~a~~~-----------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~--~~~~~~ilR  143 (314)
                      +++..           ..++.++++++.  ++++||++||.++++.     .. .|..+|...|+.++.  .+++++++|
T Consensus       143 ~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p-----~~-~~~~sK~~~E~~l~~~~~gl~~tIlR  216 (390)
T PLN02657        143 CLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKP-----LL-EFQRAKLKFEAELQALDSDFTYSIVR  216 (390)
T ss_pred             CCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCc-----ch-HHHHHHHHHHHHHHhccCCCCEEEEc
Confidence            87642           234678889887  7889999999887642     22 367789999998875  789999999


Q ss_pred             cCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCcee-eeeeHHHHHHHHHHHhcCCccCCceEEecCC-ccccHHHHHH
Q 021331          144 PVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVT-QLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLAR  221 (314)
Q Consensus       144 ~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~-~~~s~~el~~  221 (314)
                      |+.+||+      +..++..+..+.++.++|+++..+ ++||++|+|++++.++.++...+++||++++ +.+|+.|+++
T Consensus       217 p~~~~~~------~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~  290 (390)
T PLN02657        217 PTAFFKS------LGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKALTPLEQGE  290 (390)
T ss_pred             cHHHhcc------cHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcccCHHHHHH
Confidence            9999985      223455666777777778777654 6899999999999999876556889999986 6899999999


Q ss_pred             HHHHHhCCCCCeeeecCCccc
Q 021331          222 ACAKAAGFPEPELVHYNPKEF  242 (314)
Q Consensus       222 ~i~~~~g~~~~~~~~~~~~~~  242 (314)
                      .+.+.+|++. .+..+|.+.+
T Consensus       291 ~l~~~lG~~~-~~~~vp~~~~  310 (390)
T PLN02657        291 MLFRILGKEP-KFFKVPIQIM  310 (390)
T ss_pred             HHHHHhCCCC-ceEEcCHHHH
Confidence            9999999875 6676765543

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.95  E-value=2.3e-27  Score=202.96  Aligned_cols=253  Identities=19%  Similarity=0.224  Sum_probs=182.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc----CC-ccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KG-FDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~----~~-~d~   75 (314)
                      |||||++|++++++|+++|++|++++|+++...              ..++..+.+|+.|++++..+++.    .+ +|.
T Consensus         5 tGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~--------------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~   70 (285)
T TIGR03649         5 TGGTGKTASRIARLLQAASVPFLVASRSSSSSA--------------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISA   70 (285)
T ss_pred             EcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc--------------CCCCccccccCCCHHHHHHHHhcccCcCCceeE
Confidence            799999999999999999999999999986531              14567788999999999999831    26 999


Q ss_pred             EEEcCCCCc---ccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhc-CCceEEEecCeeeC
Q 021331           76 VYDINGREA---DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESK-GVNWTSLRPVYIYG  149 (314)
Q Consensus        76 vi~~a~~~~---~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~-~~~~~ilR~~~v~g  149 (314)
                      |+|+++...   ....++++++.  +++|||++||.+++..          ...+...++++++. +++++++||+++++
T Consensus        71 v~~~~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~----------~~~~~~~~~~l~~~~gi~~tilRp~~f~~  140 (285)
T TIGR03649        71 VYLVAPPIPDLAPPMIKFIDFARSKGVRRFVLLSASIIEKG----------GPAMGQVHAHLDSLGGVEYTVLRPTWFME  140 (285)
T ss_pred             EEEeCCCCCChhHHHHHHHHHHHHcCCCEEEEeeccccCCC----------CchHHHHHHHHHhccCCCEEEEeccHHhh
Confidence            999987532   34678888887  8999999998665321          11244567778775 99999999998886


Q ss_pred             CCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCccccHHHHHHHHHHHhCC
Q 021331          150 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGF  229 (314)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~  229 (314)
                      ... ..+   ....+.....+. .+.++...++++++|+|++++.++.++...++.|++++++.+|+.|+++.+.+.+|+
T Consensus       141 ~~~-~~~---~~~~~~~~~~~~-~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~  215 (285)
T TIGR03649       141 NFS-EEF---HVEAIRKENKIY-SATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDDVAEILSRVLGR  215 (285)
T ss_pred             hhc-ccc---cccccccCCeEE-ecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHHHHHHHHHHhCC
Confidence            521 110   112222333333 345677899999999999999999987656789999999999999999999999998


Q ss_pred             CCCeeeecCCccccc-----CCCCc-----c----cCCCcceeecHHhHHhhcCCCcccChHHHHHHHH
Q 021331          230 PEPELVHYNPKEFDF-----GKKKA-----F----PFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSY  284 (314)
Q Consensus       230 ~~~~~~~~~~~~~~~-----~~~~~-----~----~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~  284 (314)
                      +. ....+++..+..     +....     .    ..........+...++.+|..|+ +|++.+++..
T Consensus       216 ~v-~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~-~~~~~~~~~~  282 (285)
T TIGR03649       216 KI-THVKLTEEELAQRLQSFGMPEDLARMLASLDTAVKNGAEVRLNDVVKAVTGSKPR-GFRDFAESNK  282 (285)
T ss_pred             ce-EEEeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCccccccchHHHHhCcCCc-cHHHHHHHhh
Confidence            76 666666544321     10000     0    00011111235556777899998 8999988864

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.95  E-value=2.1e-26  Score=184.88  Aligned_cols=283  Identities=20%  Similarity=0.208  Sum_probs=204.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccc-cC--CCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQ--LPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      ||-||+-|+.|++.|+++||+|.++.|+.+..+ ..  +-...   +. ...+++++.+|++|...+..+++..+||.|+
T Consensus         8 TGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~---~~-~~~~l~l~~gDLtD~~~l~r~l~~v~PdEIY   83 (345)
T COG1089           8 TGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDP---HL-NDPRLHLHYGDLTDSSNLLRILEEVQPDEIY   83 (345)
T ss_pred             ecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceecccc---cc-CCceeEEEeccccchHHHHHHHHhcCchhhe
Confidence            799999999999999999999999998754321 11  11000   00 1245889999999999999999999999999


Q ss_pred             EcCCCC----------------cccHHHHHHhCC--C--CCcEEEEeeceeeccCCCCCccC--------ccccchhhHH
Q 021331           78 DINGRE----------------ADEVEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTE  129 (314)
Q Consensus        78 ~~a~~~----------------~~~~~~~~~~~~--~--~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e  129 (314)
                      |+++..                ..++.+++++++  +  ..||...||...||.....|..|        +|+.+|..+-
T Consensus        84 NLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlYa~  163 (345)
T COG1089          84 NLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAY  163 (345)
T ss_pred             eccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHHHH
Confidence            998873                346889999987  2  46899999999999765555444        6777776665


Q ss_pred             HHH----HhcCCceEEEecCeeeCCCCCCchhH----HHHHHHHcCCC-eecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          130 SVL----ESKGVNWTSLRPVYIYGPLNYNPVEE----WFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       130 ~~~----~~~~~~~~ilR~~~v~g~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.    .++|+-.+.=.+.+--+|.....|..    .-+.++..|.. -...|+-+..+||-|+.|.++++..+++++.
T Consensus       164 W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~~  243 (345)
T COG1089         164 WITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQEE  243 (345)
T ss_pred             heeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHccCC
Confidence            543    46776655544443334432222322    22333444432 2334889999999999999999999999876


Q ss_pred             cCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeec--CC---------cccccCCCCcccCCCcceeecHHhHHhhcC
Q 021331          201 ASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHY--NP---------KEFDFGKKKAFPFRDQHFFASVEKAKHVLG  269 (314)
Q Consensus       201 ~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~--~~---------~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg  269 (314)
                        ++.|.++.++..|.+|+++.-.+..|... ....-  .+         ..+.+.+.-.+|....-...|.+|+++.||
T Consensus       244 --PddyViATg~t~sVrefv~~Af~~~g~~l-~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llgdp~KA~~~LG  320 (345)
T COG1089         244 --PDDYVIATGETHSVREFVELAFEMVGIDL-EWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLGDPTKAKEKLG  320 (345)
T ss_pred             --CCceEEecCceeeHHHHHHHHHHHcCceE-EEeeccccccccccccCceeEEECccccCchhhhhhcCCHHHHHHHcC
Confidence              67999999999999999999999999644 21100  00         011111222355556677889999999999


Q ss_pred             CCcccChHHHHHHHHhhhhcC
Q 021331          270 WKPEFDLVEGLADSYNLDFGR  290 (314)
Q Consensus       270 ~~~~~~~~~~l~~~~~~~~~~  290 (314)
                      |.|++++++.+++++++...+
T Consensus       321 W~~~~~~~elv~~Mv~~dl~~  341 (345)
T COG1089         321 WRPEVSLEELVREMVEADLEA  341 (345)
T ss_pred             CccccCHHHHHHHHHHHHHHH
Confidence            999999999999999987653

>PLN02996 fatty acyl-CoA reductase

Probab=99.95  E-value=5e-26  Score=206.79  Aligned_cols=228  Identities=13%  Similarity=0.139  Sum_probs=167.6

Q ss_pred             CCcccccHHHHHHHHHHCC---CeEEEEEcCCccccc--C----C-CCCCch--------hhhh-ccCceEEEEecCC--
Q 021331            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQ--Q----L-PGESDQ--------EFAE-FSSKILHLKGDRK--   59 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~--~----~-~~~~~~--------~~~~-~~~~~~~~~~D~~--   59 (314)
                      ||||||+|++|++.|++.+   .+|+++.|.......  .    + ....-.        .+.+ ...++.++.+|++  
T Consensus        17 TGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~GDl~~~   96 (491)
T PLN02996         17 TGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYD   96 (491)
T ss_pred             eCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEecccCCc
Confidence            8999999999999999864   468999997653210  0    0 000000        0000 0267999999998  


Q ss_pred             -----ChhhHHHhhhcCCccEEEEcCCC-------------CcccHHHHHHhCC---CCCcEEEEeeceeeccCCCC---
Q 021331           60 -----DYDFVKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSDLL---  115 (314)
Q Consensus        60 -----d~~~l~~~~~~~~~d~vi~~a~~-------------~~~~~~~~~~~~~---~~~~~i~~Ss~~v~~~~~~~---  115 (314)
                           +.+.+..+++  ++|+|||+|+.             |+.++.+++++|.   ++++|||+||.++||.....   
T Consensus        97 ~LGLs~~~~~~~l~~--~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~~i~E  174 (491)
T PLN02996         97 DLGVKDSNLREEMWK--EIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSGLILE  174 (491)
T ss_pred             CCCCChHHHHHHHHh--CCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCceeee
Confidence                 4455677777  89999999985             3456888888875   56799999999999753210   


Q ss_pred             --------------------------------------------------------CccCccccchhhHHHHHHhc--CC
Q 021331          116 --------------------------------------------------------PHCESRHKGKLNTESVLESK--GV  137 (314)
Q Consensus       116 --------------------------------------------------------~~~e~~~~~k~~~e~~~~~~--~~  137 (314)
                                                                              .+...|+.+|.++|+++.++  ++
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~~~~l  254 (491)
T PLN02996        175 KPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFKENL  254 (491)
T ss_pred             ecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHhcCCC
Confidence                                                                    01125999999999999763  79


Q ss_pred             ceEEEecCeeeCCCCCC--ch------hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC--c-cCCceE
Q 021331          138 NWTSLRPVYIYGPLNYN--PV------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--K-ASRQVF  206 (314)
Q Consensus       138 ~~~ilR~~~v~g~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~--~-~~~~~~  206 (314)
                      +++++||++||||+...  .+      ...++..+..+....+++++++.++++|++|++++++.++.+.  . ..+++|
T Consensus       255 pv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vY  334 (491)
T PLN02996        255 PLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIY  334 (491)
T ss_pred             CEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhccCCCCcEE
Confidence            99999999999986421  11      1223333455666567799999999999999999999988752  1 246799


Q ss_pred             EecCC--ccccHHHHHHHHHHHhCCC
Q 021331          207 NISGE--KYVTFDGLARACAKAAGFP  230 (314)
Q Consensus       207 ~i~~~--~~~s~~el~~~i~~~~g~~  230 (314)
                      |++++  .++|+.|+++.+.+.++..
T Consensus       335 Ni~s~~~~~~s~~ei~~~~~~~~~~~  360 (491)
T PLN02996        335 HVGSSLKNPVKFSNLHDFAYRYFSKN  360 (491)
T ss_pred             EecCCCCCcccHHHHHHHHHHHhhhC
Confidence            99998  8899999999999988753

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.93  E-value=1.6e-26  Score=191.48  Aligned_cols=214  Identities=19%  Similarity=0.275  Sum_probs=160.4

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhh-c-cCceE----EEEecCCChhhHHHhhhcCCc
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKIL----HLKGDRKDYDFVKSSLSAKGF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~-~-~~~~~----~~~~D~~d~~~l~~~~~~~~~   73 (314)
                      |||+|.||+.|+++|++.+ .++++++|+....-....     ++.. . ..++.    .+.+|++|.+.+.++++..++
T Consensus         4 TGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~-----~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~p   78 (293)
T PF02719_consen    4 TGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELER-----ELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKP   78 (293)
T ss_dssp             ETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHH-----HCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-
T ss_pred             EccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHH-----HHhhcccccCcccccCceeecccCHHHHHHHHhhcCC
Confidence            7999999999999999997 689999999766321110     1100 0 12343    457899999999999999999


Q ss_pred             cEEEEcCCC----------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhc
Q 021331           74 DVVYDINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESK  135 (314)
Q Consensus        74 d~vi~~a~~----------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~  135 (314)
                      |+|||+|+.                |+.+++|+++++.  ++++||++||+.+..+.+      .|+.+|+.+|.++...
T Consensus        79 diVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~Ptn------vmGatKrlaE~l~~~~  152 (293)
T PF02719_consen   79 DIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPTN------VMGATKRLAEKLVQAA  152 (293)
T ss_dssp             SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--S------HHHHHHHHHHHHHHHH
T ss_pred             CEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCCc------HHHHHHHHHHHHHHHH
Confidence            999999997                5678999999988  899999999987754322      5899999999998642


Q ss_pred             -------CCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEe
Q 021331          136 -------GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI  208 (314)
Q Consensus       136 -------~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i  208 (314)
                             +..++++|+|+|.|.  .+.+++.+..++..++++.+ .+.+.++-|++++++++.++.++.... .|++|.+
T Consensus       153 ~~~~~~~~t~f~~VRFGNVlgS--~GSVip~F~~Qi~~g~PlTv-T~p~mtRffmti~EAv~Lvl~a~~~~~-~geifvl  228 (293)
T PF02719_consen  153 NQYSGNSDTKFSSVRFGNVLGS--RGSVIPLFKKQIKNGGPLTV-TDPDMTRFFMTIEEAVQLVLQAAALAK-GGEIFVL  228 (293)
T ss_dssp             CCTSSSS--EEEEEEE-EETTG--TTSCHHHHHHHHHTTSSEEE-CETT-EEEEE-HHHHHHHHHHHHHH---TTEEEEE
T ss_pred             hhhCCCCCcEEEEEEecceecC--CCcHHHHHHHHHHcCCccee-CCCCcEEEEecHHHHHHHHHHHHhhCC-CCcEEEe
Confidence                   357999999999997  46689999999999999998 577889999999999999999998755 5899999


Q ss_pred             cCCccccHHHHHHHHHHHhCC
Q 021331          209 SGEKYVTFDGLARACAKAAGF  229 (314)
Q Consensus       209 ~~~~~~s~~el~~~i~~~~g~  229 (314)
                      ..|+++++.|+++.+.+..|.
T Consensus       229 ~mg~~v~I~dlA~~~i~~~g~  249 (293)
T PF02719_consen  229 DMGEPVKILDLAEAMIELSGL  249 (293)
T ss_dssp             ---TCEECCCHHHHHHHHTT-
T ss_pred             cCCCCcCHHHHHHHHHhhccc
Confidence            999999999999999999985

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.93  E-value=2.6e-24  Score=184.90  Aligned_cols=243  Identities=14%  Similarity=0.114  Sum_probs=166.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccc--cCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA--QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      ||||||||+++++.|+++||+|++++|+.....  ..+.     .+.....++.++.+|++|.+++.+++.  ++|.|+|
T Consensus        12 TGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~d~~~~~~~l~--~~d~v~~   84 (297)
T PLN02583         12 MDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIR-----GLSCEEERLKVFDVDPLDYHSILDALK--GCSGLFC   84 (297)
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHH-----hcccCCCceEEEEecCCCHHHHHHHHc--CCCEEEE
Confidence            799999999999999999999999998643211  0000     000002468899999999999999998  9999999


Q ss_pred             cCCC--------------CcccHHHHHHhCC---CCCcEEEEeeceee--ccC---CCCCccC--------------ccc
Q 021331           79 INGR--------------EADEVEPILDALP---NLEQFIYCSSAGVY--LKS---DLLPHCE--------------SRH  122 (314)
Q Consensus        79 ~a~~--------------~~~~~~~~~~~~~---~~~~~i~~Ss~~v~--~~~---~~~~~~e--------------~~~  122 (314)
                      +++.              |..++.++++++.   +++|||++||..++  +..   ...+.+|              .|+
T Consensus        85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  164 (297)
T PLN02583         85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA  164 (297)
T ss_pred             eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence            7643              2345788999876   46899999997654  311   1112222              388


Q ss_pred             cchhhHHHHHH----hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          123 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       123 ~~k~~~e~~~~----~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      .+|..+|+++.    ..++++++|||+.||||+..... .     ...+.. ...++  ..+++||++|+|++++.++++
T Consensus       165 ~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~-~-----~~~~~~-~~~~~--~~~~~v~V~Dva~a~~~al~~  235 (297)
T PLN02583        165 LAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN-P-----YLKGAA-QMYEN--GVLVTVDVNFLVDAHIRAFED  235 (297)
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch-h-----hhcCCc-ccCcc--cCcceEEHHHHHHHHHHHhcC
Confidence            89999999873    46899999999999999653211 1     122221 11122  246799999999999999997


Q ss_pred             CccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCc
Q 021331          199 EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKP  272 (314)
Q Consensus       199 ~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~  272 (314)
                      +.. ++.|.+.++....+.++++.+.+.++.-. ......  ..        ........+++.|+++ |||+.
T Consensus       236 ~~~-~~r~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~--~~--------~~~~~~~~~~~~k~~~-l~~~~  296 (297)
T PLN02583        236 VSS-YGRYLCFNHIVNTEEDAVKLAQMLSPLIP-SPPPYE--MQ--------GSEVYQQRIRNKKLNK-LMEDF  296 (297)
T ss_pred             ccc-CCcEEEecCCCccHHHHHHHHHHhCCCCC-CCCccc--cc--------CCCccccccChHHHHH-hCccc
Confidence            664 45898988765567889999999877421 111000  00        0011334578899875 89864

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.93  E-value=4.1e-24  Score=189.39  Aligned_cols=226  Identities=19%  Similarity=0.190  Sum_probs=159.1

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcccc------cCCCCCCchhhhhccCceEEEEecCCCh------hhHHH
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIA------QQLPGESDQEFAEFSSKILHLKGDRKDY------DFVKS   66 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~D~~d~------~~l~~   66 (314)
                      ||||||+|+++++.|+++|  ++|+++.|+.+...      ..+.............++.++.+|++++      +.+..
T Consensus         5 tGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~~~~~   84 (367)
T TIGR01746         5 TGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDAEWER   84 (367)
T ss_pred             eccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHHHHHH
Confidence            7999999999999999998  67999999865311      0000000000000014789999998754      45666


Q ss_pred             hhhcCCccEEEEcCCC-------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCC-------------cc
Q 021331           67 SLSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLP-------------HC  118 (314)
Q Consensus        67 ~~~~~~~d~vi~~a~~-------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~-------------~~  118 (314)
                      +..  ++|+|||+|+.             |..++.+++++|.  +.++|+++||.++|+.....+             ..
T Consensus        85 ~~~--~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~~~  162 (367)
T TIGR01746        85 LAE--NVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPGLA  162 (367)
T ss_pred             HHh--hCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccccC
Confidence            666  89999999874             3456778888877  667799999999987532111             01


Q ss_pred             CccccchhhHHHHHHh---cCCceEEEecCeeeCCCCCC-----chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHH
Q 021331          119 ESRHKGKLNTESVLES---KGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  190 (314)
Q Consensus       119 e~~~~~k~~~e~~~~~---~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  190 (314)
                      ..|+.+|+.+|.++++   .+++++++||+.+||+....     .++..++.........  +.......++++++|+++
T Consensus       163 ~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~~~vddva~  240 (367)
T TIGR01746       163 GGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAY--PDSPELTEDLTPVDYVAR  240 (367)
T ss_pred             CChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCC--CCCCccccCcccHHHHHH
Confidence            1599999999998754   48999999999999973221     2233333333222222  222223578999999999


Q ss_pred             HHHHHhcCCcc--CCceEEecCCccccHHHHHHHHHHHhCCCC
Q 021331          191 AFVQVLGNEKA--SRQVFNISGEKYVTFDGLARACAKAAGFPE  231 (314)
Q Consensus       191 ~~~~~l~~~~~--~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  231 (314)
                      +++.++.++..  .+++||+++++++++.|+++.+.+ +|.+.
T Consensus       241 ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~  282 (367)
T TIGR01746       241 AIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNL  282 (367)
T ss_pred             HHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCC
Confidence            99999877543  278999999999999999999999 88765

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.93  E-value=8.8e-24  Score=181.28  Aligned_cols=242  Identities=12%  Similarity=0.068  Sum_probs=170.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||+||||++|++.|+++|++|+...                             .|+.|.+.+...+...++|+|||+|
T Consensus        15 tG~tGfiG~~l~~~L~~~g~~V~~~~-----------------------------~~~~~~~~v~~~l~~~~~D~ViH~A   65 (298)
T PLN02778         15 YGKTGWIGGLLGKLCQEQGIDFHYGS-----------------------------GRLENRASLEADIDAVKPTHVFNAA   65 (298)
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEec-----------------------------CccCCHHHHHHHHHhcCCCEEEECC
Confidence            79999999999999999999987431                             1334555666667666899999999


Q ss_pred             CCC-------------------cccHHHHHHhCC--CCCcEEEEeeceeeccCC------CCCcc---------Cccccc
Q 021331           81 GRE-------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD------LLPHC---------ESRHKG  124 (314)
Q Consensus        81 ~~~-------------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~------~~~~~---------e~~~~~  124 (314)
                      +..                   ..++.+++++|.  ++ +++++||..+|+...      ..++.         ..|+.+
T Consensus        66 a~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~s  144 (298)
T PLN02778         66 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGL-VLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKT  144 (298)
T ss_pred             cccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHH
Confidence            853                   224778999988  55 567778878875311      11111         269999


Q ss_pred             hhhHHHHHHhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCc
Q 021331          125 KLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  204 (314)
Q Consensus       125 k~~~e~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~  204 (314)
                      |.++|.++..+. +..++|++..+|++..  ....++..+..+..+...+     .+++|++|++++++.++..+.  ++
T Consensus       145 K~~~E~~~~~y~-~~~~lr~~~~~~~~~~--~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~~~~--~g  214 (298)
T PLN02778        145 KAMVEELLKNYE-NVCTLRVRMPISSDLS--NPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAKRNL--TG  214 (298)
T ss_pred             HHHHHHHHHHhh-ccEEeeecccCCcccc--cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHhCCC--CC
Confidence            999999998764 6788999888886422  2234667777776544322     269999999999999997643  46


Q ss_pred             eEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHH
Q 021331          205 VFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSY  284 (314)
Q Consensus       205 ~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~  284 (314)
                      +||+++++.+|+.|+++.+++.+|... ....+...+..  .  .......+..+|++|+++.++=.++ ..+++++..+
T Consensus       215 ~yNigs~~~iS~~el~~~i~~~~~~~~-~~~~~~i~~~~--~--~~~~~~~~~~Ld~~k~~~~~~~~~~-~~~~~~~~~~  288 (298)
T PLN02778        215 IYNFTNPGVVSHNEILEMYRDYIDPSF-TWKNFTLEEQA--K--VIVAPRSNNELDTTKLKREFPELLP-IKESLIKYVF  288 (298)
T ss_pred             eEEeCCCCcccHHHHHHHHHHHhCCCc-eeccccHHHHH--H--HHhCCCccccccHHHHHHhcccccc-hHHHHHHHHH
Confidence            999999999999999999999999542 11111111100  0  0000112336899999998877665 6889999988


Q ss_pred             hhhh
Q 021331          285 NLDF  288 (314)
Q Consensus       285 ~~~~  288 (314)
                      +..+
T Consensus       289 ~~~~  292 (298)
T PLN02778        289 EPNK  292 (298)
T ss_pred             HHHH
Confidence            8653

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.92  E-value=2e-24  Score=190.02  Aligned_cols=214  Identities=20%  Similarity=0.266  Sum_probs=181.6

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      |||+|.+|+.+|+++++.+ .++++++|+..+.- .+.    +++.+.  ..++.++.+|+.|.+.+..++...++|+||
T Consensus       256 TGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~-~i~----~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~Vf  330 (588)
T COG1086         256 TGGGGSIGSELCRQILKFNPKEIILFSRDEYKLY-LID----MELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDIVF  330 (588)
T ss_pred             eCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHH-HHH----HHHHhhCCCcceEEEecccccHHHHHHHHhcCCCceEE
Confidence            8999999999999999986 67888898876631 111    112111  367889999999999999999977799999


Q ss_pred             EcCCC----------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhc----
Q 021331           78 DINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESK----  135 (314)
Q Consensus        78 ~~a~~----------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~----  135 (314)
                      |+|+.                |+.++.|++++|.  ++++||.+||+.+-.+.+      .++.+|+.+|.++.+.    
T Consensus       331 HAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~PtN------vmGaTKr~aE~~~~a~~~~~  404 (588)
T COG1086         331 HAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPTN------VMGATKRLAEKLFQAANRNV  404 (588)
T ss_pred             EhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCch------HhhHHHHHHHHHHHHHhhcc
Confidence            99986                5678999999988  999999999977643322      5899999999998542    


Q ss_pred             ---CCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCc
Q 021331          136 ---GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK  212 (314)
Q Consensus       136 ---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~  212 (314)
                         +-.++.+|+|+|.|.  .+++++.+.+++.+|.++++ .+++-++-|+++.|.++.++.+..... .|++|.+..|+
T Consensus       405 ~~~~T~f~~VRFGNVlGS--rGSViPlFk~QI~~GgplTv-Tdp~mtRyfMTI~EAv~LVlqA~a~~~-gGeifvldMGe  480 (588)
T COG1086         405 SGTGTRFCVVRFGNVLGS--RGSVIPLFKKQIAEGGPLTV-TDPDMTRFFMTIPEAVQLVLQAGAIAK-GGEIFVLDMGE  480 (588)
T ss_pred             CCCCcEEEEEEecceecC--CCCCHHHHHHHHHcCCCccc-cCCCceeEEEEHHHHHHHHHHHHhhcC-CCcEEEEcCCC
Confidence               367999999999998  46689999999999999998 688999999999999999999998755 68999999999


Q ss_pred             cccHHHHHHHHHHHhCC
Q 021331          213 YVTFDGLARACAKAAGF  229 (314)
Q Consensus       213 ~~s~~el~~~i~~~~g~  229 (314)
                      ++++.|+++.+.+..|.
T Consensus       481 pvkI~dLAk~mi~l~g~  497 (588)
T COG1086         481 PVKIIDLAKAMIELAGQ  497 (588)
T ss_pred             CeEHHHHHHHHHHHhCC
Confidence            99999999999999983

>PRK12320 hypothetical protein; Provisional

Probab=99.92  E-value=9.4e-24  Score=195.48  Aligned_cols=225  Identities=15%  Similarity=0.170  Sum_probs=161.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||+||||++|++.|+++|++|++++|.....   .           ..+++++.+|++|+. +.+++.  ++|+|||++
T Consensus         6 TGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---~-----------~~~ve~v~~Dl~d~~-l~~al~--~~D~VIHLA   68 (699)
T PRK12320          6 TDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---L-----------DPRVDYVCASLRNPV-LQELAG--EADAVIHLA   68 (699)
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---c-----------cCCceEEEccCCCHH-HHHHhc--CCCEEEEcC
Confidence            79999999999999999999999999865431   1           146889999999985 778887  899999999


Q ss_pred             CCC--------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCceEEEecCeeeCC
Q 021331           81 GRE--------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGP  150 (314)
Q Consensus        81 ~~~--------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~~~ilR~~~v~g~  150 (314)
                      +..        ..++.+++++|.  ++ ++||+||.  +|...      .|.    .+|.++..++++++++|++++|||
T Consensus        69 a~~~~~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~--~G~~~------~~~----~aE~ll~~~~~p~~ILR~~nVYGp  135 (699)
T PRK12320         69 PVDTSAPGGVGITGLAHVANAAARAGA-RLLFVSQA--AGRPE------LYR----QAETLVSTGWAPSLVIRIAPPVGR  135 (699)
T ss_pred             ccCccchhhHHHHHHHHHHHHHHHcCC-eEEEEECC--CCCCc------ccc----HHHHHHHhcCCCEEEEeCceecCC
Confidence            853        355788999987  54 89999985  33221      122    578888878899999999999999


Q ss_pred             CCCC---chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCccccHHHHHHHHHHHh
Q 021331          151 LNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAA  227 (314)
Q Consensus       151 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~  227 (314)
                      +...   .++..++.....+++          ..++|++|++++++.+++.+.  +++||+++++.+|+.|+++.+....
T Consensus       136 ~~~~~~~r~I~~~l~~~~~~~p----------I~vIyVdDvv~alv~al~~~~--~GiyNIG~~~~~Si~el~~~i~~~~  203 (699)
T PRK12320        136 QLDWMVCRTVATLLRSKVSARP----------IRVLHLDDLVRFLVLALNTDR--NGVVDLATPDTTNVVTAWRLLRSVD  203 (699)
T ss_pred             CCcccHhHHHHHHHHHHHcCCc----------eEEEEHHHHHHHHHHHHhCCC--CCEEEEeCCCeeEHHHHHHHHHHhC
Confidence            6432   234444433333332          346999999999999998643  4599999999999999999997763


Q ss_pred             CCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChH--HHHHHH
Q 021331          228 GFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLV--EGLADS  283 (314)
Q Consensus       228 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~--~~l~~~  283 (314)
                      ....  +.  +..            ......-|.......++|.|+..++  +.+.++
T Consensus       204 p~~~--~~--~~~------------~~~~~~pdi~~a~~~~~w~~~~~~~~~~~~~~~  245 (699)
T PRK12320        204 PHLR--TR--RVR------------SWEQLIPEVDIAAVQEDWNFEFGWQATEAIVDT  245 (699)
T ss_pred             CCcc--cc--ccc------------cHHHhCCCCchhhhhcCCCCcchHHHHHHHHhh
Confidence            3211  11  110            1122234555666678999997644  344444

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.92  E-value=2.9e-24  Score=172.55  Aligned_cols=274  Identities=21%  Similarity=0.209  Sum_probs=203.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      +|||||+|..++.+|.+.|.+|++-.|..+.-...++--.+      ..++-+...|+.|+++++.+.+  ..++|||+.
T Consensus        67 FGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGd------LGQvl~~~fd~~DedSIr~vvk--~sNVVINLI  138 (391)
T KOG2865|consen   67 FGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGD------LGQVLFMKFDLRDEDSIRAVVK--HSNVVINLI  138 (391)
T ss_pred             ecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccc------ccceeeeccCCCCHHHHHHHHH--hCcEEEEee
Confidence            69999999999999999999999999877653333321111      3679999999999999999999  999999998


Q ss_pred             CC------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCceEEEecCe
Q 021331           81 GR------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVY  146 (314)
Q Consensus        81 ~~------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~~~ilR~~~  146 (314)
                      |.            +..+.+.+...|+  ++.|||++|+-+.-   -..+.  -+-++|...|..+++.-...+|+||+.
T Consensus       139 Grd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan---v~s~S--r~LrsK~~gE~aVrdafPeAtIirPa~  213 (391)
T KOG2865|consen  139 GRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN---VKSPS--RMLRSKAAGEEAVRDAFPEATIIRPAD  213 (391)
T ss_pred             ccccccCCcccccccchHHHHHHHHHHhhChhheeehhhcccc---ccChH--HHHHhhhhhHHHHHhhCCcceeechhh
Confidence            86            3455788888898  99999999986632   11111  367889999999988777899999999


Q ss_pred             eeCCCCCCchhHHHHHHHHcCCCeecCCCCC-ceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCccccHHHHHHHHHH
Q 021331          147 IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGI-QVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAK  225 (314)
Q Consensus       147 v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~  225 (314)
                      +||..  +.+++.+......-..+++++.|. ..-.++|+-|+|.+|+.++++|...|.+|...|+......||++.+-+
T Consensus       214 iyG~e--Drfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~~yql~eLvd~my~  291 (391)
T KOG2865|consen  214 IYGTE--DRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPDRYQLSELVDIMYD  291 (391)
T ss_pred             hcccc--hhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCCchhhHHHHHHHHHH
Confidence            99973  446666666666667788877664 456899999999999999999988999999999999999999999998


Q ss_pred             HhCCCCCeeeecCCcccccC---------CCC-cccC--------CCcceeecHHhHHhhcCCCcccChHHHHHHHHhhh
Q 021331          226 AAGFPEPELVHYNPKEFDFG---------KKK-AFPF--------RDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLD  287 (314)
Q Consensus       226 ~~g~~~~~~~~~~~~~~~~~---------~~~-~~~~--------~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~~  287 (314)
                      ...... .....+-+.+...         ... ..++        ......+++....++||..+. +++..--+.+..|
T Consensus       292 ~~~~~~-ry~r~~mP~f~a~a~~~~f~~~pf~~~~pln~d~ie~~~v~~~vlt~~~tleDLgv~~t-~le~~~~e~l~~y  369 (391)
T KOG2865|consen  292 MAREWP-RYVRLPMPIFKAMAAARDFMIVPFPPPSPLNRDQIERLTVTDLVLTGAPTLEDLGVVLT-KLELYPVEFLRQY  369 (391)
T ss_pred             HHhhcc-ccccCCcHHHHHHHhhhheeecCCCCCCCCCHHHhhheeehhhhcCCCCcHhhcCceee-ecccccHHHHHHH
Confidence            876533 3333333222110         000 0011        012333444455678999866 8887777777666


Q ss_pred             hcCC
Q 021331          288 FGRG  291 (314)
Q Consensus       288 ~~~~  291 (314)
                      ..-+
T Consensus       370 R~~~  373 (391)
T KOG2865|consen  370 RKGG  373 (391)
T ss_pred             hhcc
Confidence            6543

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.90  E-value=4.2e-23  Score=165.03  Aligned_cols=169  Identities=33%  Similarity=0.517  Sum_probs=136.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      +||||++|+.++++|+++|++|++++|++++...             ..+++++.+|+.|++++.++++  ++|+||+++
T Consensus         4 ~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------------~~~~~~~~~d~~d~~~~~~al~--~~d~vi~~~   68 (183)
T PF13460_consen    4 FGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------------SPGVEIIQGDLFDPDSVKAALK--GADAVIHAA   68 (183)
T ss_dssp             ETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------------CTTEEEEESCTTCHHHHHHHHT--TSSEEEECC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------------ccccccceeeehhhhhhhhhhh--hcchhhhhh
Confidence            6999999999999999999999999999887443             2789999999999999999999  999999999


Q ss_pred             CCC---cccHHHHHHhCC--CCCcEEEEeeceeeccCCCC------CccCccccchhhHHHHHHhcCCceEEEecCeeeC
Q 021331           81 GRE---ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLL------PHCESRHKGKLNTESVLESKGVNWTSLRPVYIYG  149 (314)
Q Consensus        81 ~~~---~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~------~~~e~~~~~k~~~e~~~~~~~~~~~ilR~~~v~g  149 (314)
                      +..   ...+++++++|+  +++++|++|+.++|+.....      +....|...+..+|+.+++.+++|+++||+.+||
T Consensus        69 ~~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~~  148 (183)
T PF13460_consen   69 GPPPKDVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTIVRPGWIYG  148 (183)
T ss_dssp             HSTTTHHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEEEB
T ss_pred             hhhcccccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEeEe
Confidence            854   345678888886  88999999999998754432      1112567788889999999999999999999999


Q ss_pred             CCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          150 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      +....             ..+ +...+....++|+.+|+|++++.++++
T Consensus       149 ~~~~~-------------~~~-~~~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  149 NPSRS-------------YRL-IKEGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             TTSSS-------------EEE-ESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             CCCcc-------------eeE-EeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            84221             111 111334456999999999999999864

...

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.88  E-value=1.5e-21  Score=163.79  Aligned_cols=200  Identities=18%  Similarity=0.147  Sum_probs=145.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCC-hhhHHHhh-hcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSL-SAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~l~~~~-~~~~~d~vi~   78 (314)
                      |||||++|+++++.|+++|++|+++.|+.+........         ..++.++.+|++| .+.+.+.+ .  ++|+||+
T Consensus        23 tGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~---------~~~~~~~~~Dl~d~~~~l~~~~~~--~~d~vi~   91 (251)
T PLN00141         23 AGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ---------DPSLQIVRADVTEGSDKLVEAIGD--DSDAVIC   91 (251)
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhccc---------CCceEEEEeeCCCCHHHHHHHhhc--CCCEEEE
Confidence            79999999999999999999999999987653222211         1468899999998 46676766 5  7999999


Q ss_pred             cCCCCc------------ccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCcc---------ccchhhHHHHHHhc
Q 021331           79 INGREA------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESR---------HKGKLNTESVLESK  135 (314)
Q Consensus        79 ~a~~~~------------~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~---------~~~k~~~e~~~~~~  135 (314)
                      +++...            .++.++++++.  ++++||++||.++|+.....+..+.|         ...|..+|+++++.
T Consensus        92 ~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~  171 (251)
T PLN00141         92 ATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKS  171 (251)
T ss_pred             CCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhc
Confidence            987632            24678888877  77899999999998754333222222         23577888888889


Q ss_pred             CCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCc---
Q 021331          136 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK---  212 (314)
Q Consensus       136 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~---  212 (314)
                      +++++++||++++++.....              ..+.........+++.+|+|++++.++..+...+.++.+.+..   
T Consensus       172 gi~~~iirpg~~~~~~~~~~--------------~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (251)
T PLN00141        172 GINYTIVRPGGLTNDPPTGN--------------IVMEPEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADAP  237 (251)
T ss_pred             CCcEEEEECCCccCCCCCce--------------EEECCCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCCC
Confidence            99999999999998632111              1111111112357999999999999998877667788888733   


Q ss_pred             cccHHHHHHHHHH
Q 021331          213 YVTFDGLARACAK  225 (314)
Q Consensus       213 ~~s~~el~~~i~~  225 (314)
                      ..++.+++..+++
T Consensus       238 ~~~~~~~~~~~~~  250 (251)
T PLN00141        238 KRSYKDLFASIKQ  250 (251)
T ss_pred             chhHHHHHHHhhc
Confidence            3778888777654

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.88  E-value=7.6e-23  Score=169.84  Aligned_cols=212  Identities=23%  Similarity=0.332  Sum_probs=154.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCccc-ccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      +||||.+|+++++.|++.+++|+++.|+.+.. ...+.          ..+++++.+|+.|++++.++|+  ++|+||.+
T Consensus         4 ~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~----------~~g~~vv~~d~~~~~~l~~al~--g~d~v~~~   71 (233)
T PF05368_consen    4 TGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ----------ALGAEVVEADYDDPESLVAALK--GVDAVFSV   71 (233)
T ss_dssp             ETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH----------HTTTEEEES-TT-HHHHHHHHT--TCSEEEEE
T ss_pred             ECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh----------cccceEeecccCCHHHHHHHHc--CCceEEee
Confidence            69999999999999999999999999998431 11111          2578899999999999999999  99999988


Q ss_pred             CCCC----cccHHHHHHhCC--CCCcEEEEeeceeeccCC-CCCccCccccchhhHHHHHHhcCCceEEEecCeeeCCCC
Q 021331           80 NGRE----ADEVEPILDALP--NLEQFIYCSSAGVYLKSD-LLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLN  152 (314)
Q Consensus        80 a~~~----~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~-~~~~~e~~~~~k~~~e~~~~~~~~~~~ilR~~~v~g~~~  152 (314)
                      .+..    .....++++++.  ++++||+.|....+.... ..|.. .....|..+|+++++.+++++++|++.++... 
T Consensus        72 ~~~~~~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~~~p~~-~~~~~k~~ie~~l~~~~i~~t~i~~g~f~e~~-  149 (233)
T PF05368_consen   72 TPPSHPSELEQQKNLIDAAKAAGVKHFVPSSFGADYDESSGSEPEI-PHFDQKAEIEEYLRESGIPYTIIRPGFFMENL-  149 (233)
T ss_dssp             SSCSCCCHHHHHHHHHHHHHHHT-SEEEESEESSGTTTTTTSTTHH-HHHHHHHHHHHHHHHCTSEBEEEEE-EEHHHH-
T ss_pred             cCcchhhhhhhhhhHHHhhhccccceEEEEEecccccccccccccc-hhhhhhhhhhhhhhhccccceeccccchhhhh-
Confidence            8754    345788999988  999999755544442211 11111 24456889999999999999999999866531 


Q ss_pred             CCchhHHHHHH--HHcCC-CeecCCCCCceeeee-eHHHHHHHHHHHhcCCccC--CceEEecCCccccHHHHHHHHHHH
Q 021331          153 YNPVEEWFFHR--LKAGR-PIPIPGSGIQVTQLG-HVKDLARAFVQVLGNEKAS--RQVFNISGEKYVTFDGLARACAKA  226 (314)
Q Consensus       153 ~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~i-~~~D~a~~~~~~l~~~~~~--~~~~~i~~~~~~s~~el~~~i~~~  226 (314)
                          +..+...  ....+ .+.++++++....++ +.+|+|++++.++.++...  +..+.+++ +.+|+.|+++.+.+.
T Consensus       150 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-~~~t~~eia~~~s~~  224 (233)
T PF05368_consen  150 ----LPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-ETLTYNEIAAILSKV  224 (233)
T ss_dssp             ----HTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-GEEEHHHHHHHHHHH
T ss_pred             ----hhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-CCCCHHHHHHHHHHH
Confidence                1111110  11122 356667777666775 9999999999999986543  56777765 779999999999999


Q ss_pred             hCCCC
Q 021331          227 AGFPE  231 (314)
Q Consensus       227 ~g~~~  231 (314)
                      +|++.
T Consensus       225 ~G~~v  229 (233)
T PF05368_consen  225 LGKKV  229 (233)
T ss_dssp             HTSEE
T ss_pred             HCCcc
Confidence            99754

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.88  E-value=1.8e-21  Score=153.44  Aligned_cols=282  Identities=18%  Similarity=0.209  Sum_probs=194.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccc-cCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      ||-||.-|+.|++.|+++||+|.++.|+.+.-+ ..+.................+.+|++|...+.++++...|+-|+|+
T Consensus        34 TGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPtEiYnL  113 (376)
T KOG1372|consen   34 TGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPTEVYNL  113 (376)
T ss_pred             ecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCchhhhhh
Confidence            689999999999999999999999998776521 1111111111222246788999999999999999998999999999


Q ss_pred             CCCC----------------cccHHHHHHhCC-----CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHH
Q 021331           80 NGRE----------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTES  130 (314)
Q Consensus        80 a~~~----------------~~~~~~~~~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~  130 (314)
                      |+..                ..++.+++++++     ..-||...||...||.....|..|        +|+.+|..+-.
T Consensus       114 aAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~aKmy~~W  193 (376)
T KOG1372|consen  114 AAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAAKMYGYW  193 (376)
T ss_pred             hhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHHhhhhheE
Confidence            8863                356788888854     334899999999999655444443        45555543322


Q ss_pred             HH----HhcCCceEEEecCeeeC---CCCCCchhHHHH----HHHHcCC--CeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          131 VL----ESKGVNWTSLRPVYIYG---PLNYNPVEEWFF----HRLKAGR--PIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       131 ~~----~~~~~~~~ilR~~~v~g---~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      ++    ..+++-   -+-|.+|.   |.....|...-+    .++.-++  .+.+ |+.+..++|-|..|-+++|..+++
T Consensus       194 ivvNyREAYnmf---AcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~L-GNL~a~RDWGhA~dYVEAMW~mLQ  269 (376)
T KOG1372|consen  194 IVVNYREAYNMF---ACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIEL-GNLSALRDWGHAGDYVEAMWLMLQ  269 (376)
T ss_pred             EEEEhHHhhcce---eeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEe-cchhhhcccchhHHHHHHHHHHHh
Confidence            22    334432   22344444   322233433322    2233333  2333 888889999999999999999999


Q ss_pred             CCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCc----------ccccCCCCcccCCCcceeecHHhHHhh
Q 021331          198 NEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPK----------EFDFGKKKAFPFRDQHFFASVEKAKHV  267 (314)
Q Consensus       198 ~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~k~~~~  267 (314)
                      ++.  ..-|.|..++..|.+|+.+.-...+|... ....-...          .+....+..+|.....+..|.+|+++.
T Consensus       270 ~d~--PdDfViATge~hsVrEF~~~aF~~ig~~l-~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~LqGdasKAk~~  346 (376)
T KOG1372|consen  270 QDS--PDDFVIATGEQHSVREFCNLAFAEIGEVL-NWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQGDASKAKKT  346 (376)
T ss_pred             cCC--CCceEEecCCcccHHHHHHHHHHhhCcEE-eecccccccccccCCceEEEEecccccCcchhhhhcCChHHHHHh
Confidence            875  46789999999999999999999998421 11100000          111223334566667788899999999


Q ss_pred             cCCCcccChHHHHHHHHhhhhc
Q 021331          268 LGWKPEFDLVEGLADSYNLDFG  289 (314)
Q Consensus       268 lg~~~~~~~~~~l~~~~~~~~~  289 (314)
                      |||+|+..+.+.+++++.....
T Consensus       347 LgW~pkv~f~eLVkeMv~~Die  368 (376)
T KOG1372|consen  347 LGWKPKVTFPELVKEMVASDIE  368 (376)
T ss_pred             hCCCCccCHHHHHHHHHHhHHH
Confidence            9999999999999999875443

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.87  E-value=4.9e-21  Score=175.62  Aligned_cols=225  Identities=16%  Similarity=0.179  Sum_probs=158.2

Q ss_pred             CCcccccHHHHHHHHHHCCC---eEEEEEcCCcccc--cC----C-CCCCchh--------hhh-ccCceEEEEecCCCh
Q 021331            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIA--QQ----L-PGESDQE--------FAE-FSSKILHLKGDRKDY   61 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~--~~----~-~~~~~~~--------~~~-~~~~~~~~~~D~~d~   61 (314)
                      ||||||+|+.|++.|++.+.   +|+++.|......  ..    + ....-..        ++. ...++.++.+|++++
T Consensus       125 TGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~GDl~d~  204 (605)
T PLN02503        125 TGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVGNVCES  204 (605)
T ss_pred             cCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEeeCCCc
Confidence            89999999999999998753   6899999754311  11    1 0000000        000 135799999999987


Q ss_pred             ------hhHHHhhhcCCccEEEEcCCC-------------CcccHHHHHHhCC---CCCcEEEEeeceeeccCCC-----
Q 021331           62 ------DFVKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSDL-----  114 (314)
Q Consensus        62 ------~~l~~~~~~~~~d~vi~~a~~-------------~~~~~~~~~~~~~---~~~~~i~~Ss~~v~~~~~~-----  114 (314)
                            +..+.+.+  ++|+|||+|+.             |+.++.+++++|.   ..++|||+||.++||...+     
T Consensus       205 ~LGLs~~~~~~L~~--~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G~i~E~  282 (605)
T PLN02503        205 NLGLEPDLADEIAK--EVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGRIMEK  282 (605)
T ss_pred             ccCCCHHHHHHHHh--cCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCCeeeee
Confidence                  34555556  79999999986             3456788999875   4678999999999985421     


Q ss_pred             -CC------------------------------------------------------------ccCccccchhhHHHHHH
Q 021331          115 -LP------------------------------------------------------------HCESRHKGKLNTESVLE  133 (314)
Q Consensus       115 -~~------------------------------------------------------------~~e~~~~~k~~~e~~~~  133 (314)
                       .+                                                            ++..|..+|.++|+++.
T Consensus       283 ~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE~lV~  362 (605)
T PLN02503        283 PFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVIN  362 (605)
T ss_pred             ecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHHHHHH
Confidence             01                                                            11268889999999997


Q ss_pred             hc--CCceEEEecCee----------eCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC-C-
Q 021331          134 SK--GVNWTSLRPVYI----------YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN-E-  199 (314)
Q Consensus       134 ~~--~~~~~ilR~~~v----------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~-~-  199 (314)
                      +.  +++++|+||+.|          ++++.. ...+.++ ....|..-.++++++...++|+++.++.+++.++.. . 
T Consensus       363 ~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~-~~~p~~~-~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~  440 (605)
T PLN02503        363 SMRGDIPVVIIRPSVIESTWKDPFPGWMEGNR-MMDPIVL-YYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGG  440 (605)
T ss_pred             HhcCCCCEEEEcCCEecccccCCccccccCcc-ccchhhh-heeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhc
Confidence            54  699999999999          334311 1111111 112333333668889999999999999999888432 1 


Q ss_pred             --ccCCceEEecCC--ccccHHHHHHHHHHHhCC
Q 021331          200 --KASRQVFNISGE--KYVTFDGLARACAKAAGF  229 (314)
Q Consensus       200 --~~~~~~~~i~~~--~~~s~~el~~~i~~~~g~  229 (314)
                        ...+.+||++++  .++++.++.+.+.+++..
T Consensus       441 ~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~  474 (605)
T PLN02503        441 AAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS  474 (605)
T ss_pred             ccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence              124689999998  899999999999987764

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.87  E-value=6.9e-22  Score=165.49  Aligned_cols=190  Identities=21%  Similarity=0.205  Sum_probs=113.6

Q ss_pred             CCcccccHHHHHHHHHHCCC--eEEEEEcCCccc---c---cCCCCCCc-hhh-hhccCceEEEEecCCCh------hhH
Q 021331            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPI---A---QQLPGESD-QEF-AEFSSKILHLKGDRKDY------DFV   64 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~---~---~~~~~~~~-~~~-~~~~~~~~~~~~D~~d~------~~l   64 (314)
                      ||||||+|++|+++|++++.  +|+++.|..+..   .   ..+..... ... .....+++++.+|++++      +.+
T Consensus         2 TGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~~   81 (249)
T PF07993_consen    2 TGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDEDY   81 (249)
T ss_dssp             E-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHHH
T ss_pred             cCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHHh
Confidence            89999999999999999976  899999987431   1   11111110 000 01258999999999975      456


Q ss_pred             HHhhhcCCccEEEEcCCC-------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCC-------------
Q 021331           65 KSSLSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLP-------------  116 (314)
Q Consensus        65 ~~~~~~~~~d~vi~~a~~-------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~-------------  116 (314)
                      .++.+  ++|+|||+|+.             |+.+++++++.|.  +.++|+|+||..+.+......             
T Consensus        82 ~~L~~--~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~  159 (249)
T PF07993_consen   82 QELAE--EVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLD  159 (249)
T ss_dssp             HHHHH--H--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE
T ss_pred             hcccc--ccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccch
Confidence            66666  89999999886             4677999999988  556999999965554333211             


Q ss_pred             ----ccCccccchhhHHHHHHh----cCCceEEEecCeeeCCCC-----CCc-hhHHHHHHHHcCCCeecCCCCCceeee
Q 021331          117 ----HCESRHKGKLNTESVLES----KGVNWTSLRPVYIYGPLN-----YNP-VEEWFFHRLKAGRPIPIPGSGIQVTQL  182 (314)
Q Consensus       117 ----~~e~~~~~k~~~e~~~~~----~~~~~~ilR~~~v~g~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (314)
                          ....|..+|+.+|+++++    .|++++|+||+.|+|...     ... +...+...+..+.....++..+...++
T Consensus       160 ~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~  239 (249)
T PF07993_consen  160 PPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDL  239 (249)
T ss_dssp             --TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--E
T ss_pred             hhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeE
Confidence                111899999999999853    389999999999999421     223 333344444444433455565667999


Q ss_pred             eeHHHHHHHH
Q 021331          183 GHVKDLARAF  192 (314)
Q Consensus       183 i~~~D~a~~~  192 (314)
                      ++++.+|++|
T Consensus       240 vPVD~va~aI  249 (249)
T PF07993_consen  240 VPVDYVARAI  249 (249)
T ss_dssp             EEHHHHHHHH
T ss_pred             ECHHHHHhhC
Confidence            9999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.87  E-value=6.9e-21  Score=180.94  Aligned_cols=237  Identities=15%  Similarity=0.107  Sum_probs=165.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||+||||++|++.|.++|++|...                             .+|++|.+.+...+...++|+|||+|
T Consensus       386 tGa~G~iG~~l~~~L~~~g~~v~~~-----------------------------~~~l~d~~~v~~~i~~~~pd~Vih~A  436 (668)
T PLN02260        386 YGRTGWIGGLLGKLCEKQGIAYEYG-----------------------------KGRLEDRSSLLADIRNVKPTHVFNAA  436 (668)
T ss_pred             ECCCchHHHHHHHHHHhCCCeEEee-----------------------------ccccccHHHHHHHHHhhCCCEEEECC
Confidence            7999999999999999999987311                             13567888888888877899999999


Q ss_pred             CCC-------------------cccHHHHHHhCC--CCCcEEEEeeceeeccC------CCCCcc---------Cccccc
Q 021331           81 GRE-------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS------DLLPHC---------ESRHKG  124 (314)
Q Consensus        81 ~~~-------------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~------~~~~~~---------e~~~~~  124 (314)
                      +..                   ..++.+++++|.  ++ ++|++||.++|+..      ...|+.         ..|+.+
T Consensus       437 a~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~s  515 (668)
T PLN02260        437 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKT  515 (668)
T ss_pred             cccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHH
Confidence            753                   234778999988  55 57888898888531      111222         269999


Q ss_pred             hhhHHHHHHhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCC-CeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCC
Q 021331          125 KLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  203 (314)
Q Consensus       125 k~~~e~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~  203 (314)
                      |..+|.+++.+ .+..++|+.++|+.+...  ...++..+.... .+.++      ....+++|++.+++.++..+  .+
T Consensus       516 K~~~E~~~~~~-~~~~~~r~~~~~~~~~~~--~~nfv~~~~~~~~~~~vp------~~~~~~~~~~~~~~~l~~~~--~~  584 (668)
T PLN02260        516 KAMVEELLREY-DNVCTLRVRMPISSDLSN--PRNFITKISRYNKVVNIP------NSMTVLDELLPISIEMAKRN--LR  584 (668)
T ss_pred             HHHHHHHHHhh-hhheEEEEEEecccCCCC--ccHHHHHHhccceeeccC------CCceehhhHHHHHHHHHHhC--CC
Confidence            99999999877 478899999999753221  112333333322 23332      24667788998888888643  25


Q ss_pred             ceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHH
Q 021331          204 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADS  283 (314)
Q Consensus       204 ~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~  283 (314)
                      ++||++++..+|+.|+++.+.+.++... .+..++...+.....+.+|   .. .+|++|+++.+|. +. +|+++|+++
T Consensus       585 giyni~~~~~~s~~e~a~~i~~~~~~~~-~~~~~~~~~~~~~~~a~rp---~~-~l~~~k~~~~~~~-~~-~~~~~l~~~  657 (668)
T PLN02260        585 GIWNFTNPGVVSHNEILEMYKDYIDPGF-KWSNFTLEEQAKVIVAPRS---NN-EMDASKLKKEFPE-LL-SIKESLIKY  657 (668)
T ss_pred             ceEEecCCCcCcHHHHHHHHHHhcCCcc-cccccCHHHhhhHhhCCCc---cc-cccHHHHHHhCcc-cc-chHHHHHHH
Confidence            7999999999999999999999885221 1233322221100111122   33 6999999998999 66 899999998


Q ss_pred             Hh
Q 021331          284 YN  285 (314)
Q Consensus       284 ~~  285 (314)
                      +.
T Consensus       658 ~~  659 (668)
T PLN02260        658 VF  659 (668)
T ss_pred             Hh
Confidence            75

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.82  E-value=5.1e-19  Score=181.28  Aligned_cols=225  Identities=18%  Similarity=0.187  Sum_probs=157.0

Q ss_pred             CCcccccHHHHHHHHHHCC----CeEEEEEcCCccccc--CCCCCCc---hhhhhccCceEEEEecCCCh------hhHH
Q 021331            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQ--QLPGESD---QEFAEFSSKILHLKGDRKDY------DFVK   65 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~D~~d~------~~l~   65 (314)
                      ||||||+|.++++.|++++    ++|+++.|.......  .+.....   ........++.++.+|+.++      +.+.
T Consensus       977 TGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~~~~~~ 1056 (1389)
T TIGR03443       977 TGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLSDEKWS 1056 (1389)
T ss_pred             eCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcCHHHHH
Confidence            7999999999999999887    889999997543210  0000000   00001124789999999753      4566


Q ss_pred             HhhhcCCccEEEEcCCC-------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCC--------------CCC
Q 021331           66 SSLSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSD--------------LLP  116 (314)
Q Consensus        66 ~~~~~~~~d~vi~~a~~-------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~--------------~~~  116 (314)
                      ++..  ++|+|||+|+.             |+.++.++++++.  +.++|+|+||.++|+...              ..+
T Consensus      1057 ~l~~--~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~ 1134 (1389)
T TIGR03443      1057 DLTN--EVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIP 1134 (1389)
T ss_pred             HHHh--cCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhccCCCCC
Confidence            6666  89999999875             4456888999887  678999999999985310              000


Q ss_pred             -----------ccCccccchhhHHHHHHh---cCCceEEEecCeeeCCCCCC-----chhHHHHHHHHcCCCeecCCCCC
Q 021331          117 -----------HCESRHKGKLNTESVLES---KGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGI  177 (314)
Q Consensus       117 -----------~~e~~~~~k~~~e~~~~~---~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  177 (314)
                                 ....|+.+|+.+|.++..   .|++++++||+.|||+....     .++..++........   .....
T Consensus      1135 e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~---~p~~~ 1211 (1389)
T TIGR03443      1135 ESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGL---IPNIN 1211 (1389)
T ss_pred             cccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCC---cCCCC
Confidence                       011599999999999853   58999999999999986432     123333322222221   12344


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCc--cCCceEEecCCccccHHHHHHHHHHHhCCCC
Q 021331          178 QVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVTFDGLARACAKAAGFPE  231 (314)
Q Consensus       178 ~~~~~i~~~D~a~~~~~~l~~~~--~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  231 (314)
                      ..+++++++|+|++++.++.++.  ..+.+||++++..+++.++++.+.+. |.+.
T Consensus      1212 ~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~ 1266 (1389)
T TIGR03443      1212 NTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDV 1266 (1389)
T ss_pred             CccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCC
Confidence            56899999999999999987653  23468999999899999999999764 6544

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.82  E-value=1.1e-19  Score=163.92  Aligned_cols=213  Identities=17%  Similarity=0.122  Sum_probs=144.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhh--hh--ccCceEEEEecCCChhhHHHhhhcCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF--AE--FSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~D~~d~~~l~~~~~~~~~d~v   76 (314)
                      |||+|+||.+++++|+++|++|++++|+...............+  .+  ...++.++.+|+.|.+++.+++.  ++|+|
T Consensus        86 TGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLg--giDiV  163 (576)
T PLN03209         86 AGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALG--NASVV  163 (576)
T ss_pred             ECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhc--CCCEE
Confidence            79999999999999999999999999987653211100000000  00  01358899999999999999998  89999


Q ss_pred             EEcCCCC--------------cccHHHHHHhCC--CCCcEEEEeeceeeccCC-CCCcc--CccccchhhHHHHHHhcCC
Q 021331           77 YDINGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD-LLPHC--ESRHKGKLNTESVLESKGV  137 (314)
Q Consensus        77 i~~a~~~--------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~-~~~~~--e~~~~~k~~~e~~~~~~~~  137 (314)
                      ||++|..              ..++.+++++|.  +++|||++||.+++.... ...+.  ..|...|..+|+++..+|+
T Consensus       164 Vn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~~~sk~~~~~~KraaE~~L~~sGI  243 (576)
T PLN03209        164 ICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAEEALIASGL  243 (576)
T ss_pred             EEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccchhhHHHHHHHHHHHHHHHHHcCC
Confidence            9998853              235678888886  788999999987631110 00010  1355668888999999999


Q ss_pred             ceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-cCCceEEecCCccccH
Q 021331          138 NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGEKYVTF  216 (314)
Q Consensus       138 ~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-~~~~~~~i~~~~~~s~  216 (314)
                      +|++||||+++++.+...-          ...+.....+......+..+|||++++.++.++. ..+.+|.+.++.....
T Consensus       244 rvTIVRPG~L~tp~d~~~~----------t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~~~~p~  313 (576)
T PLN03209        244 PYTIVRPGGMERPTDAYKE----------THNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAETTAPL  313 (576)
T ss_pred             CEEEEECCeecCCcccccc----------ccceeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEEeCCCCCC
Confidence            9999999999887432110          0111111111111235788999999999998764 4678999998864444


Q ss_pred             HHHHHHHHH
Q 021331          217 DGLARACAK  225 (314)
Q Consensus       217 ~el~~~i~~  225 (314)
                      ..+.+++..
T Consensus       314 ~~~~~~~~~  322 (576)
T PLN03209        314 TPMEELLAK  322 (576)
T ss_pred             CCHHHHHHh
Confidence            444444443

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.78  E-value=8.7e-19  Score=147.99  Aligned_cols=219  Identities=15%  Similarity=0.125  Sum_probs=143.9

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcccc------cCCCCCCchhhhhccCceEEEEecCCCh------hhHHHh
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIA------QQLPGESDQEFAEFSSKILHLKGDRKDY------DFVKSS   67 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~D~~d~------~~l~~~   67 (314)
                      ||||||+|.+++.+|+.+- .+|+++.|..+...      +.+. ....--+.+.++++++.+|+..+      ..+.++
T Consensus         6 TGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~-~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~~~~L   84 (382)
T COG3320           6 TGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFD-LYRHWDELSADRVEVVAGDLAEPDLGLSERTWQEL   84 (382)
T ss_pred             ecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhh-hhhhhhhhhcceEEEEecccccccCCCCHHHHHHH
Confidence            8999999999999999885 59999999887311      1111 00011112357899999999843      566666


Q ss_pred             hhcCCccEEEEcCCC-------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCC----CC-------------
Q 021331           68 LSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSD----LL-------------  115 (314)
Q Consensus        68 ~~~~~~d~vi~~a~~-------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~----~~-------------  115 (314)
                      -+  ++|.|||+++.             |+.++..+++.|.  +.|.|.|+||.+|+....    ..             
T Consensus        85 a~--~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~  162 (382)
T COG3320          85 AE--NVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQ  162 (382)
T ss_pred             hh--hcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccccC
Confidence            66  89999999774             6788999999987  678899999999974211    11             


Q ss_pred             CccCccccchhhHHHHHH---hcCCceEEEecCeeeCCCC-----CCchhHHHHHHHHcCCCeecCCCCCceeeeeeH--
Q 021331          116 PHCESRHKGKLNTESVLE---SKGVNWTSLRPVYIYGPLN-----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV--  185 (314)
Q Consensus       116 ~~~e~~~~~k~~~e~~~~---~~~~~~~ilR~~~v~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--  185 (314)
                      ...-.|+++|+.+|.+++   +.|++++|+|||.|-|+..     ...++..++.-.......+   ......+++.+  
T Consensus       163 ~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P---~~~~~~~~~p~~~  239 (382)
T COG3320         163 GLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAP---DSEYSLDMLPVDH  239 (382)
T ss_pred             ccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCC---CcccchhhCccce
Confidence            111289999999999986   3689999999999999753     2234444444443333222   11112233332  


Q ss_pred             ---------HHHHHHHHHHhcCCccCCceEE-ecCCccccHHHHHHHHHH
Q 021331          186 ---------KDLARAFVQVLGNEKASRQVFN-ISGEKYVTFDGLARACAK  225 (314)
Q Consensus       186 ---------~D~a~~~~~~l~~~~~~~~~~~-i~~~~~~s~~el~~~i~~  225 (314)
                               .-+++++..+..++...-..|+ ..-|..++..++.+.+.+
T Consensus       240 v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         240 VARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             eeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence                     3334344444433332223344 333667999999999888

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.78  E-value=3.9e-18  Score=144.14  Aligned_cols=204  Identities=15%  Similarity=0.120  Sum_probs=136.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+++.......     .+.+....+.++.+|++|.+.+.++++..     ++|+
T Consensus        13 tGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   87 (262)
T PRK13394         13 TGAASGIGKEIALELARAGAAVAIADLNQDGANAVAD-----EINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDI   87 (262)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH-----HHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998754321111     11222346788999999999888877632     4899


Q ss_pred             EEEcCCCCc--------------------cc----HHHHHHhC-C--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA--------------------DE----VEPILDAL-P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~--------------------~~----~~~~~~~~-~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      |||+++...                    .+    ++++++.+ .  +.+++|++||...+..   .+....|+.+|...
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~---~~~~~~y~~sk~a~  164 (262)
T PRK13394         88 LVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEA---SPLKSAYVTAKHGL  164 (262)
T ss_pred             EEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCC---CCCCcccHHHHHHH
Confidence            999998631                    11    45567766 4  5679999999654422   22333688888877


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcC--C-CeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG--R-PIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      +.+++       ..+++++++||+.+++|.....+ ..........  . ...+++.+....++++++|++++++.++..
T Consensus       165 ~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~  243 (262)
T PRK13394        165 LGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQI-PEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSF  243 (262)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhh-HhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCc
Confidence            76653       24799999999999998422111 1100000000  0 001122334457899999999999999986


Q ss_pred             Cc--cCCceEEecCCcc
Q 021331          199 EK--ASRQVFNISGEKY  213 (314)
Q Consensus       199 ~~--~~~~~~~i~~~~~  213 (314)
                      +.  ..|+.|++.++..
T Consensus       244 ~~~~~~g~~~~~~~g~~  260 (262)
T PRK13394        244 PSAALTGQSFVVSHGWF  260 (262)
T ss_pred             cccCCcCCEEeeCCcee
Confidence            43  2578899988753

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.1e-17  Score=142.51  Aligned_cols=207  Identities=16%  Similarity=0.194  Sum_probs=142.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-----CCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-----~~~d~   75 (314)
                      |||+|+||++++++|+++|++|++++|+.+.......        ....++.++.+|++|.+++.+++.+     .++|+
T Consensus         8 tGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (276)
T PRK06482          8 TGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKA--------RYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV   79 (276)
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------hccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654221110        0124688999999999988887653     25899


Q ss_pred             EEEcCCCC--------------------cccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~--------------------~~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |||++|..                    ..++.++++++    .  +.++||++||......   .|....|+.+|...|
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---~~~~~~Y~~sK~a~~  156 (276)
T PRK06482         80 VVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA---YPGFSLYHATKWGIE  156 (276)
T ss_pred             EEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC---CCCCchhHHHHHHHH
Confidence            99999863                    22344555554    3  5678999999654322   222336999999888


Q ss_pred             HHHH-------hcCCceEEEecCee---eCCCCCCc--------hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHH
Q 021331          130 SVLE-------SKGVNWTSLRPVYI---YGPLNYNP--------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  191 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v---~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  191 (314)
                      .+++       .++++++++||+.+   ||++....        .....+........+.+         +.+++|++++
T Consensus       157 ~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~d~~~~~~a  227 (276)
T PRK06482        157 GFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAI---------PGDPQKMVQA  227 (276)
T ss_pred             HHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCC---------CCCHHHHHHH
Confidence            7663       25899999999988   55432110        01111112222221111         3568999999


Q ss_pred             HHHHhcCCccCCceEEecCCccccHHHHHHHHHHHhC
Q 021331          192 FVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG  228 (314)
Q Consensus       192 ~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g  228 (314)
                      ++.++..+. .+..|++++++..+..|+++.+.+.++
T Consensus       228 ~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~  263 (276)
T PRK06482        228 MIASADQTP-APRRLTLGSDAYASIRAALSERLAALE  263 (276)
T ss_pred             HHHHHcCCC-CCeEEecChHHHHHHHHHHHHHHHHHH
Confidence            999998654 356799999988888888887777765

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.75  E-value=2.1e-17  Score=139.07  Aligned_cols=200  Identities=18%  Similarity=0.210  Sum_probs=131.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|.++++.|+++|++|++++|+.+.......     .+.....++.++.+|+.|++++..+++..     ++|+
T Consensus         7 tGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   81 (255)
T TIGR01963         7 TGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAK-----VATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI   81 (255)
T ss_pred             cCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654221110     11111246888999999999776665432     5899


Q ss_pred             EEEcCCCCc--------------------ccHHH----HHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~----~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |||+++...                    .+...    +++.+.  +.+++|++||...+...   +....|..+|...+
T Consensus        82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~---~~~~~y~~sk~a~~  158 (255)
T TIGR01963        82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVAS---PFKSAYVAAKHGLI  158 (255)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCC---CCCchhHHHHHHHH
Confidence            999997631                    11122    333333  56789999997655332   22346888887777


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCee-------cCCCCCceeeeeeHHHHHHHHHHH
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP-------IPGSGIQVTQLGHVKDLARAFVQV  195 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~~D~a~~~~~~  195 (314)
                      .+.+       ..+++++++||+.++++...     ..+..........       ....+...+++++++|+|++++.+
T Consensus       159 ~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~  233 (255)
T TIGR01963       159 GLTKVLALEVAAHGITVNAICPGYVRTPLVE-----KQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFL  233 (255)
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCccccHHHH-----HHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHH
Confidence            6653       24899999999999987321     1111110000000       011233456799999999999999


Q ss_pred             hcCCc--cCCceEEecCCcc
Q 021331          196 LGNEK--ASRQVFNISGEKY  213 (314)
Q Consensus       196 l~~~~--~~~~~~~i~~~~~  213 (314)
                      +.++.  ..++.|++.++..
T Consensus       234 ~~~~~~~~~g~~~~~~~g~~  253 (255)
T TIGR01963       234 ASDAAAGITGQAIVLDGGWT  253 (255)
T ss_pred             cCccccCccceEEEEcCccc
Confidence            97642  2578899988753

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.75  E-value=1.5e-17  Score=140.20  Aligned_cols=199  Identities=16%  Similarity=0.188  Sum_probs=133.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|.+++++|+++|++|++++|+++......     ..+.....++.++.+|+.|++++.++++..     .+|+
T Consensus        10 tG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   84 (258)
T PRK12429         10 TGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAA-----EALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDI   84 (258)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999876532211     111112356889999999999988887642     5899


Q ss_pred             EEEcCCCCc--------------------cc----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |||+++...                    .+    ++.++..+.  +.++||++||...+...   +....|..+|...+
T Consensus        85 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~---~~~~~y~~~k~a~~  161 (258)
T PRK12429         85 LVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGS---AGKAAYVSAKHGLI  161 (258)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCC---CCcchhHHHHHHHH
Confidence            999998521                    11    344555554  56799999996554322   12235777787766


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcC--CCe-----ecCCCCCceeeeeeHHHHHHHHHHH
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG--RPI-----PIPGSGIQVTQLGHVKDLARAFVQV  195 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~i~~~D~a~~~~~~  195 (314)
                      .+.+       ..++.++++||+.+++|.....     +......  .+.     ..++.......+++++|+|++++.+
T Consensus       162 ~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l  236 (258)
T PRK12429        162 GLTKVVALEGATHGVTVNAICPGYVDTPLVRKQ-----IPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFL  236 (258)
T ss_pred             HHHHHHHHHhcccCeEEEEEecCCCcchhhhhh-----hhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHH
Confidence            5543       3579999999999998742111     1111000  000     0111222345799999999999999


Q ss_pred             hcCCc--cCCceEEecCCc
Q 021331          196 LGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       196 l~~~~--~~~~~~~i~~~~  212 (314)
                      +....  ..++.|++.++.
T Consensus       237 ~~~~~~~~~g~~~~~~~g~  255 (258)
T PRK12429        237 ASFAAKGVTGQAWVVDGGW  255 (258)
T ss_pred             cCccccCccCCeEEeCCCE
Confidence            87632  257889998874

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.75  E-value=2.2e-17  Score=138.36  Aligned_cols=197  Identities=18%  Similarity=0.206  Sum_probs=133.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||||++|.+++++|+++|++|+++.|+.......+.    ..+.....++.++.+|+.|++++.++++..     ++|+
T Consensus        12 tGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~   87 (249)
T PRK12825         12 TGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELV----EAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRIDI   87 (249)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH----HHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999887877654221111    111112356889999999999988887632     6899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |||++|...                    .+..++++.+    .  +.++||++||...+....   ....|..+|...+
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~---~~~~y~~sK~~~~  164 (249)
T PRK12825         88 LVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWP---GRSNYAAAKAGLV  164 (249)
T ss_pred             EEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCC---CchHHHHHHHHHH
Confidence            999998521                    1122333333    3  567999999977764322   2225888887776


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+++       ..+++++++||+.++++.....+.......   ....+       ...+++.+|+++++..++.++.  
T Consensus       165 ~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~---~~~~~-------~~~~~~~~dva~~~~~~~~~~~~~  234 (249)
T PRK12825        165 GLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAK---DAETP-------LGRSGTPEDIARAVAFLCSDASDY  234 (249)
T ss_pred             HHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhh---hccCC-------CCCCcCHHHHHHHHHHHhCccccC
Confidence            6552       358999999999999985332221111111   00111       1238899999999999997643  


Q ss_pred             cCCceEEecCCccc
Q 021331          201 ASRQVFNISGEKYV  214 (314)
Q Consensus       201 ~~~~~~~i~~~~~~  214 (314)
                      ..|++|+++++..+
T Consensus       235 ~~g~~~~i~~g~~~  248 (249)
T PRK12825        235 ITGQVIEVTGGVDV  248 (249)
T ss_pred             cCCCEEEeCCCEee
Confidence            36899999998654

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.75  E-value=2.1e-17  Score=138.74  Aligned_cols=197  Identities=17%  Similarity=0.155  Sum_probs=132.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|.+++++|+++|++|++++|+.++.....     ..+.....++.++.+|+.|++++.++++..     .+|+
T Consensus        12 tGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   86 (251)
T PRK12826         12 TGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATA-----ELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDI   86 (251)
T ss_pred             cCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865422111     011111245889999999999998888643     6899


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |||+++....                    +..++++++    .  +.++||++||...++.  ..+....|..+|..++
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~--~~~~~~~y~~sK~a~~  164 (251)
T PRK12826         87 LVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV--GYPGLAHYAASKAGLV  164 (251)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc--CCCCccHHHHHHHHHH
Confidence            9999876321                    122344443    2  5678999999766511  1122235888888777


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+++       ..+++++++||+.++||.........+...+....++         ..+++++|+|++++.++..+.  
T Consensus       165 ~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~~~~  235 (251)
T PRK12826        165 GFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPL---------GRLGEPEDIAAAVLFLASDEARY  235 (251)
T ss_pred             HHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCccccC
Confidence            6653       3489999999999999853221111111222221111         257889999999999887643  


Q ss_pred             cCCceEEecCCcc
Q 021331          201 ASRQVFNISGEKY  213 (314)
Q Consensus       201 ~~~~~~~i~~~~~  213 (314)
                      ..|++|++.++..
T Consensus       236 ~~g~~~~~~~g~~  248 (251)
T PRK12826        236 ITGQTLPVDGGAT  248 (251)
T ss_pred             cCCcEEEECCCcc
Confidence            2688999988763

>PRK09135 pteridine reductase; Provisional

Probab=99.74  E-value=2.1e-17  Score=138.59  Aligned_cols=199  Identities=20%  Similarity=0.217  Sum_probs=130.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|++|++++++|+++|++|++++|+.......+.    ..+... ...+.++.+|++|.+++..+++..     ++|
T Consensus        12 tGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   87 (249)
T PRK09135         12 TGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALA----AELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLD   87 (249)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999987533111110    011111 135788999999999988887642     589


Q ss_pred             EEEEcCCCC--------------------cccHHHHHHhCC-----CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           75 VVYDINGRE--------------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        75 ~vi~~a~~~--------------------~~~~~~~~~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +|||++|..                    ..++.++++++.     ....++.+++..  +.... +....|+.+|..+|
T Consensus        88 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~Y~~sK~~~~  164 (249)
T PRK09135         88 ALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIH--AERPL-KGYPVYCAAKAALE  164 (249)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChh--hcCCC-CCchhHHHHHHHHH
Confidence            999999852                    223455666653     233555555522  22111 22226999999998


Q ss_pred             HHHHh------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC-CccC
Q 021331          130 SVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKAS  202 (314)
Q Consensus       130 ~~~~~------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~-~~~~  202 (314)
                      .+++.      .+++++++||+.++||.....+..........+.++.         .+.+++|+|+++..++.. +...
T Consensus       165 ~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~d~a~~~~~~~~~~~~~~  235 (249)
T PRK09135        165 MLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLK---------RIGTPEDIAEAVRFLLADASFIT  235 (249)
T ss_pred             HHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcC---------CCcCHHHHHHHHHHHcCcccccc
Confidence            88753      2589999999999999754333333333333322221         122479999999766654 3346


Q ss_pred             CceEEecCCcccc
Q 021331          203 RQVFNISGEKYVT  215 (314)
Q Consensus       203 ~~~~~i~~~~~~s  215 (314)
                      |++|+++++..++
T Consensus       236 g~~~~i~~g~~~~  248 (249)
T PRK09135        236 GQILAVDGGRSLT  248 (249)
T ss_pred             CcEEEECCCeecc
Confidence            8899999987654

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.74  E-value=1.8e-16  Score=134.94  Aligned_cols=206  Identities=24%  Similarity=0.267  Sum_probs=157.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||||++|+++++.|+++|++|+++.|+++......            .++.+..+|+.++..+...++  +.|.++++.
T Consensus         6 ~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------------~~v~~~~~d~~~~~~l~~a~~--G~~~~~~i~   71 (275)
T COG0702           6 TGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------------GGVEVVLGDLRDPKSLVAGAK--GVDGVLLIS   71 (275)
T ss_pred             EecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------------CCcEEEEeccCCHhHHHHHhc--cccEEEEEe
Confidence            799999999999999999999999999987743221            478999999999999999999  999999887


Q ss_pred             CCCc-------ccHH---HHHHhCC-CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCceEEEecCeeeC
Q 021331           81 GREA-------DEVE---PILDALP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYG  149 (314)
Q Consensus        81 ~~~~-------~~~~---~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~~~ilR~~~v~g  149 (314)
                      +...       ....   +..+.+. +.++++++|.........     ..|..+|..+|..+.+.+++++++|+..+|.
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~~~-----~~~~~~~~~~e~~l~~sg~~~t~lr~~~~~~  146 (275)
T COG0702          72 GLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAASP-----SALARAKAAVEAALRSSGIPYTTLRRAAFYL  146 (275)
T ss_pred             cccccccchhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCCCc-----cHHHHHHHHHHHHHHhcCCCeEEEecCeeee
Confidence            7321       2222   3333333 567788887765432111     1578889999999999999999999777766


Q ss_pred             CCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCccccHHHHHHHHHHHhCC
Q 021331          150 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGF  229 (314)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~  229 (314)
                      .....  .  .......+.+....+.+  ..+++..+|++.++...+..+...+.+|.+++++..+..++++.+....|+
T Consensus       147 ~~~~~--~--~~~~~~~~~~~~~~~~~--~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~~~~~~~l~~~~gr  220 (275)
T COG0702         147 GAGAA--F--IEAAEAAGLPVIPRGIG--RLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASGLDYTIGR  220 (275)
T ss_pred             ccchh--H--HHHHHhhCCceecCCCC--ceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCceecHHHHHHHHHHHhCC
Confidence            52211  1  12222333333222332  689999999999999999987777899999999999999999999999998


Q ss_pred             CC
Q 021331          230 PE  231 (314)
Q Consensus       230 ~~  231 (314)
                      +.
T Consensus       221 ~~  222 (275)
T COG0702         221 PV  222 (275)
T ss_pred             cc
Confidence            76

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.73  E-value=3.6e-17  Score=137.15  Aligned_cols=201  Identities=20%  Similarity=0.277  Sum_probs=132.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-----CCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-----~~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.......+.    ..+.....++.++.+|++|++++.++++.     .++|+
T Consensus        12 tGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   87 (248)
T PRK07806         12 TGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVV----AEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGLDA   87 (248)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCcE
Confidence            7999999999999999999999999987543111110    11111224678899999999988877753     25899


Q ss_pred             EEEcCCCC--------------cccHHHHHHhCC----CCCcEEEEeeceee-ccC-CCCCccCccccchhhHHHHHHh-
Q 021331           76 VYDINGRE--------------ADEVEPILDALP----NLEQFIYCSSAGVY-LKS-DLLPHCESRHKGKLNTESVLES-  134 (314)
Q Consensus        76 vi~~a~~~--------------~~~~~~~~~~~~----~~~~~i~~Ss~~v~-~~~-~~~~~~e~~~~~k~~~e~~~~~-  134 (314)
                      |||+++..              ..++.++++++.    ...++|++||.... ... ...|....|+.+|..+|.+++. 
T Consensus        88 vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~~~~~l  167 (248)
T PRK07806         88 LVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGEDALRAL  167 (248)
T ss_pred             EEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHHHHHHHHHHHHHH
Confidence            99998752              223455655544    33589999985432 111 2223233688999999988753 


Q ss_pred             ------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEe
Q 021331          135 ------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI  208 (314)
Q Consensus       135 ------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i  208 (314)
                            .++++++++|+.+-++.     ...+....   .+-...........+++++|+|++++.+++.+...|++|++
T Consensus       168 ~~~~~~~~i~v~~v~pg~~~~~~-----~~~~~~~~---~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~g~~~~i  239 (248)
T PRK07806        168 RPELAEKGIGFVVVSGDMIEGTV-----TATLLNRL---NPGAIEARREAAGKLYTVSEFAAEVARAVTAPVPSGHIEYV  239 (248)
T ss_pred             HHHhhccCeEEEEeCCccccCch-----hhhhhccC---CHHHHHHHHhhhcccCCHHHHHHHHHHHhhccccCccEEEe
Confidence                  57889999988766552     11111100   00000000001236899999999999999976567899999


Q ss_pred             cCCcc
Q 021331          209 SGEKY  213 (314)
Q Consensus       209 ~~~~~  213 (314)
                      ++++.
T Consensus       240 ~~~~~  244 (248)
T PRK07806        240 GGADY  244 (248)
T ss_pred             cCccc
Confidence            99874

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1e-16  Score=134.57  Aligned_cols=195  Identities=18%  Similarity=0.214  Sum_probs=133.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|.+++++|+++|++|++++|+.+......     ..+.+...++.++.+|++|.+++..+++..     .+|+
T Consensus        12 tGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (250)
T PRK07774         12 TGAAGGIGQAYAEALAREGASVVVADINAEGAERVA-----KQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDY   86 (250)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865422111     011111245778899999999888777642     5899


Q ss_pred             EEEcCCCCc-----------------------ccHHHHHHhCC------CCCcEEEEeeceeeccCCCCCccCccccchh
Q 021331           76 VYDINGREA-----------------------DEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCESRHKGKL  126 (314)
Q Consensus        76 vi~~a~~~~-----------------------~~~~~~~~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~  126 (314)
                      |||++|...                       .+..++++++.      +.++||++||...|...      ..|+.+|.
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------~~Y~~sK~  160 (250)
T PRK07774         87 LVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYS------NFYGLAKV  160 (250)
T ss_pred             EEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCc------cccHHHHH
Confidence            999998521                       11223333322      35689999998876432      25899999


Q ss_pred             hHHHHHHh-------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          127 NTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       127 ~~e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      ..+.+.+.       .++++++++|+.+..+.........+......+.+..         .+.+++|+|++++.++...
T Consensus       161 a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~d~a~~~~~~~~~~  231 (250)
T PRK07774        161 GLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLS---------RMGTPEDLVGMCLFLLSDE  231 (250)
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhChh
Confidence            88877642       3689999999998877543222222333333332221         1346899999999998764


Q ss_pred             c--cCCceEEecCCcccc
Q 021331          200 K--ASRQVFNISGEKYVT  215 (314)
Q Consensus       200 ~--~~~~~~~i~~~~~~s  215 (314)
                      .  ..+++|++.++..++
T Consensus       232 ~~~~~g~~~~v~~g~~~~  249 (250)
T PRK07774        232 ASWITGQIFNVDGGQIIR  249 (250)
T ss_pred             hhCcCCCEEEECCCeecc
Confidence            2  367899999987653

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.4e-17  Score=141.84  Aligned_cols=206  Identities=19%  Similarity=0.171  Sum_probs=140.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|++++++|+++|++|++++|+.+.......        .....+.++.+|++|++++..+++..     ++|+
T Consensus         9 tGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (275)
T PRK08263          9 TGASRGFGRAWTEAALERGDRVVATARDTATLADLAE--------KYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDI   80 (275)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------hccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998655321110        11246788899999999887776532     6899


Q ss_pred             EEEcCCCCcc--------------------cH----HHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |||++|....                    ++    +.++..+.  +.+++|++||...+....   ....|+.+|...+
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~---~~~~Y~~sKaa~~  157 (275)
T PRK08263         81 VVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFP---MSGIYHASKWALE  157 (275)
T ss_pred             EEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCC---CccHHHHHHHHHH
Confidence            9999986321                    12    23333333  567899999977664332   2225888998877


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCc--------hhHHHHHHHHcCCCeecCCCCCceeee-eeHHHHHHHHH
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKAGRPIPIPGSGIQVTQL-GHVKDLARAFV  193 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~D~a~~~~  193 (314)
                      .+.+       .+|++++++||+.+..+.....        ....+......         ......+ ++++|++++++
T Consensus       158 ~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~p~dva~~~~  228 (275)
T PRK08263        158 GMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAE---------QWSERSVDGDPEAAAEALL  228 (275)
T ss_pred             HHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHH---------HHHhccCCCCHHHHHHHHH
Confidence            6653       3689999999998877632110        00111111100         0111234 78999999999


Q ss_pred             HHhcCCccCCceEEecCCccccHHHHHHHHHHH
Q 021331          194 QVLGNEKASRQVFNISGEKYVTFDGLARACAKA  226 (314)
Q Consensus       194 ~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~  226 (314)
                      .+++.+...+..++..+++.+++.++.+.+.+.
T Consensus       229 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (275)
T PRK08263        229 KLVDAENPPLRLFLGSGVLDLAKADYERRLATW  261 (275)
T ss_pred             HHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHH
Confidence            999987655666666666789999999888875

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.5e-16  Score=134.07  Aligned_cols=205  Identities=14%  Similarity=0.116  Sum_probs=140.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.........     .+  ...++.++.+|+.|++++..++...     ++|+
T Consensus         8 tGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~-----~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (257)
T PRK07074          8 TGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFAD-----AL--GDARFVPVACDLTDAASLAAALANAAAERGPVDV   80 (257)
T ss_pred             ECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----Hh--cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998655321111     00  0246888999999999988877632     5899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |||++|...                    .+..++++++    .  +..++|++||...+....    ...|+.+|...+
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----~~~y~~sK~a~~  156 (257)
T PRK07074         81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAALG----HPAYSAAKAGLI  156 (257)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCCC----CcccHHHHHHHH
Confidence            999998632                    1122233332    2  456899999964432211    125888898877


Q ss_pred             HHHHh-------cCCceEEEecCeeeCCCCCCc--hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC-
Q 021331          130 SVLES-------KGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE-  199 (314)
Q Consensus       130 ~~~~~-------~~~~~~ilR~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~-  199 (314)
                      .+++.       .+++++++||+.++++.....  ....+.......         ....++++++|++++++.++.+. 
T Consensus       157 ~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~d~a~~~~~l~~~~~  227 (257)
T PRK07074        157 HYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKW---------YPLQDFATPDDVANAVLFLASPAA  227 (257)
T ss_pred             HHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCchh
Confidence            76642       479999999999988742110  011122212111         12257899999999999999753 


Q ss_pred             -ccCCceEEecCCccccHHHHHHHHHH
Q 021331          200 -KASRQVFNISGEKYVTFDGLARACAK  225 (314)
Q Consensus       200 -~~~~~~~~i~~~~~~s~~el~~~i~~  225 (314)
                       ...|.++++.++...+..||++.+..
T Consensus       228 ~~~~g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        228 RAITGVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             cCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence             23578899999998989999987754

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.71  E-value=4.2e-16  Score=131.59  Aligned_cols=192  Identities=16%  Similarity=0.174  Sum_probs=128.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+... .. +    ...+......+.++.+|++|++++.+++++.     ++|+
T Consensus        14 tGas~gIG~~la~~l~~~G~~v~~~~r~~~~-~~-~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (260)
T PRK12823         14 TGAAQGIGRGVALRAAAEGARVVLVDRSELV-HE-V----AAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDV   87 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCchHH-HH-H----HHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeE
Confidence            7999999999999999999999999987432 10 0    0111112346778999999998887776532     6899


Q ss_pred             EEEcCCCCcc-------------------------cHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREAD-------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~-------------------------~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||....                         .++.++..+.  +..++|++||...++..     ...|+.+|...
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----~~~Y~~sK~a~  162 (260)
T PRK12823         88 LINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGIN-----RVPYSAAKGGV  162 (260)
T ss_pred             EEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCC-----CCccHHHHHHH
Confidence            9999974210                         1234455453  45689999998776421     12589999888


Q ss_pred             HHHHHh-------cCCceEEEecCeeeCCCCC------------CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHH
Q 021331          129 ESVLES-------KGVNWTSLRPVYIYGPLNY------------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  189 (314)
Q Consensus       129 e~~~~~-------~~~~~~ilR~~~v~g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  189 (314)
                      +.+.+.       +++++++++|+.+++|...            ......+........++         ..+.+++|+|
T Consensus       163 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva  233 (260)
T PRK12823        163 NALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLM---------KRYGTIDEQV  233 (260)
T ss_pred             HHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCc---------ccCCCHHHHH
Confidence            877642       4899999999999997310            00111222222222222         2244689999


Q ss_pred             HHHHHHhcCCc--cCCceEEecCCc
Q 021331          190 RAFVQVLGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       190 ~~~~~~l~~~~--~~~~~~~i~~~~  212 (314)
                      ++++.++....  ..|.++++.+++
T Consensus       234 ~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        234 AAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             HHHHHHcCcccccccCcEEeecCCC
Confidence            99999987642  367899998775

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.70  E-value=4.6e-16  Score=132.52  Aligned_cols=212  Identities=20%  Similarity=0.213  Sum_probs=141.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......     .+...  ..++.++.+|+.|++++.+++++.     ++
T Consensus        13 tGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   87 (276)
T PRK05875         13 TGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAE-----EIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRL   87 (276)
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----HHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            7999999999999999999999999998654221110     11100  246788999999999888877643     68


Q ss_pred             cEEEEcCCCCc---------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchh
Q 021331           74 DVVYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKL  126 (314)
Q Consensus        74 d~vi~~a~~~~---------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~  126 (314)
                      |++||+++...                     .+...++++    +.  +..+|+++||...+...   |....|+.+|.
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~---~~~~~Y~~sK~  164 (276)
T PRK05875         88 HGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH---RWFGAYGVTKS  164 (276)
T ss_pred             CEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC---CCCcchHHHHH
Confidence            99999998421                     112223332    21  34589999997765432   22236999999


Q ss_pred             hHHHHHHh-------cCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          127 NTESVLES-------KGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       127 ~~e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      ..+.+++.       .+++++++||+.+.++...... ............         ....+.+++|+|++++.++++
T Consensus       165 a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~  235 (276)
T PRK05875        165 AVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACT---------PLPRVGEVEDVANLAMFLLSD  235 (276)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCC---------CCCCCcCHHHHHHHHHHHcCc
Confidence            99888753       4689999999988776321100 001111111111         112366799999999999987


Q ss_pred             Ccc--CCceEEecCCccc----cHHHHHHHHHHHhCC
Q 021331          199 EKA--SRQVFNISGEKYV----TFDGLARACAKAAGF  229 (314)
Q Consensus       199 ~~~--~~~~~~i~~~~~~----s~~el~~~i~~~~g~  229 (314)
                      +..  .++++++.++..+    +..|+++.+.+..+.
T Consensus       236 ~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  272 (276)
T PRK05875        236 AASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGL  272 (276)
T ss_pred             hhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHH
Confidence            543  4789999998876    777777777665543

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.70  E-value=1.9e-16  Score=134.70  Aligned_cols=193  Identities=18%  Similarity=0.174  Sum_probs=127.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.+++++|+++|++|++++|+........     ..+.....++.++.+|++|++++.++++..     .+|+
T Consensus        16 tGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   90 (274)
T PRK07775         16 AGASSGIGAATAIELAAAGFPVALGARRVEKCEELV-----DKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEV   90 (274)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999998764422110     011111246788899999999998887642     5799


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||++|...                    .++.++++.    +.  +..+||++||...+....   ....|..+|...+
T Consensus        91 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~~sK~a~~  167 (274)
T PRK07775         91 LVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRP---HMGAYGAAKAGLE  167 (274)
T ss_pred             EEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC---CcchHHHHHHHHH
Confidence            999998632                    112223333    22  445799999987765332   2235899999988


Q ss_pred             HHHHh-------cCCceEEEecCeeeCCCCCC---chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          130 SVLES-------KGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       130 ~~~~~-------~~~~~~ilR~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      .+++.       .+++++++|||.+.++....   .....++......      + ......+++++|+|++++.+++++
T Consensus       168 ~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~dva~a~~~~~~~~  240 (274)
T PRK07775        168 AMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKW------G-QARHDYFLRASDLARAITFVAETP  240 (274)
T ss_pred             HHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHh------c-ccccccccCHHHHHHHHHHHhcCC
Confidence            87743       38999999999876542111   1111111111110      1 112356899999999999999876


Q ss_pred             ccCCceEEec
Q 021331          200 KASRQVFNIS  209 (314)
Q Consensus       200 ~~~~~~~~i~  209 (314)
                      . .+.+||+.
T Consensus       241 ~-~~~~~~~~  249 (274)
T PRK07775        241 R-GAHVVNME  249 (274)
T ss_pred             C-CCCeeEEe
Confidence            4 45677776

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.69  E-value=1.7e-16  Score=133.73  Aligned_cols=201  Identities=16%  Similarity=0.233  Sum_probs=133.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......        .....+.++.+|++|++++..+++..     .+|+
T Consensus        12 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067         12 TGAASGIGEAVAERYLAEGARVVIADIKPARARLAAL--------EIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH--------HhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998765321111        01245888999999999888877643     6899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhCC-------CCCcEEEEeece-eeccCCCCCccCccccchhh
Q 021331           76 VYDINGREA--------------------DEVEPILDALP-------NLEQFIYCSSAG-VYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~~-------~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~k~~  127 (314)
                      +||+++...                    .+..++++++.       ...++|++||.. .++..    ....|+.+|..
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----~~~~Y~~sK~a  159 (257)
T PRK07067         84 LFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEA----LVSHYCATKAA  159 (257)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCC----CCchhhhhHHH
Confidence            999988521                    12334444432       125799999954 33322    22368999988


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHc---CCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA---GRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      .+.+.+       .+++++++++|+.++++.... ... .+.....   +......+.......+.+++|+|++++.++.
T Consensus       160 ~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  237 (257)
T PRK07067        160 VISYTQSAALALIRHGINVNAIAPGVVDTPMWDQ-VDA-LFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLAS  237 (257)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCcccchhhhh-hhh-hhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhC
Confidence            777653       368999999999999974211 000 0000000   0000111233345678999999999999998


Q ss_pred             CCc--cCCceEEecCCcccc
Q 021331          198 NEK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~~~s  215 (314)
                      ...  ..|.+|++.+++.+|
T Consensus       238 ~~~~~~~g~~~~v~gg~~~~  257 (257)
T PRK07067        238 ADADYIVAQTYNVDGGNWMS  257 (257)
T ss_pred             cccccccCcEEeecCCEeCC
Confidence            643  268899999987553

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.69  E-value=1.7e-16  Score=132.21  Aligned_cols=186  Identities=17%  Similarity=0.213  Sum_probs=129.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|.++++.|+++|++|++++|+..+......     .+.  ..++.++.+|+.|.+++.++++..     ++|+
T Consensus        13 tGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828         13 TGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLP-----GVP--ADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             ECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHH-----HHh--hcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            6999999999999999999999999997654221111     000  135678889999999888877632     6899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |||+++...                    .++.++++++    .  +.+++|++||...++....   ...|..+|...+
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---~~~y~~sk~a~~  162 (239)
T PRK12828         86 LVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPG---MGAYAAAKAGVA  162 (239)
T ss_pred             EEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCC---cchhHHHHHHHH
Confidence            999988521                    1223444443    2  5679999999877654322   225788887665


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+++       ..++++.++||+.++++.....            .+    .  .....+++++|+|++++.++.++.  
T Consensus       163 ~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~------------~~----~--~~~~~~~~~~dva~~~~~~l~~~~~~  224 (239)
T PRK12828        163 RLTEALAAELLDRGITVNAVLPSIIDTPPNRAD------------MP----D--ADFSRWVTPEQIAAVIAFLLSDEAQA  224 (239)
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCcccCcchhhc------------CC----c--hhhhcCCCHHHHHHHHHHHhCccccc
Confidence            5553       3579999999999998731100            00    0  112237899999999999998642  


Q ss_pred             cCCceEEecCCccc
Q 021331          201 ASRQVFNISGEKYV  214 (314)
Q Consensus       201 ~~~~~~~i~~~~~~  214 (314)
                      ..|..+.+.+++.+
T Consensus       225 ~~g~~~~~~g~~~~  238 (239)
T PRK12828        225 ITGASIPVDGGVAL  238 (239)
T ss_pred             ccceEEEecCCEeC
Confidence            35788999887643

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.1e-16  Score=132.79  Aligned_cols=194  Identities=15%  Similarity=0.170  Sum_probs=128.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|.+++++|+++|++|++++|+.+.......     .+. ...++.++.+|++|++++.++++..     ++|+
T Consensus        11 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   84 (252)
T PRK06138         11 TGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAA-----AIA-AGGRAFARQGDVGSAEAVEALVDFVAARWGRLDV   84 (252)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHH-----HHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654221110     000 1246889999999999998887642     6899


Q ss_pred             EEEcCCCCcc--------------------cH----HHHHHhCC--CCCcEEEEeeceee-ccCCCCCccCccccchhhH
Q 021331           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVY-LKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~~~~~~~--~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~k~~~  128 (314)
                      |||+++....                    ++    +.++.++.  +.++||++||.... +....    ..|..+|...
T Consensus        85 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~----~~Y~~sK~a~  160 (252)
T PRK06138         85 LVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGR----AAYVASKGAI  160 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCc----cHHHHHHHHH
Confidence            9999986321                    11    23444443  55789999996543 32222    2588888887


Q ss_pred             HHHHHh-------cCCceEEEecCeeeCCCCCCch----hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          129 ESVLES-------KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       129 e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      +.+++.       .+++++++||+.++++.....+    ....+.......        .....+++++|+|++++.++.
T Consensus       161 ~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~d~a~~~~~l~~  232 (252)
T PRK06138        161 ASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRAR--------HPMNRFGTAEEVAQAALFLAS  232 (252)
T ss_pred             HHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhc--------CCCCCCcCHHHHHHHHHHHcC
Confidence            776542       3799999999999887421100    000011111000        111237789999999999998


Q ss_pred             CCcc--CCceEEecCCc
Q 021331          198 NEKA--SRQVFNISGEK  212 (314)
Q Consensus       198 ~~~~--~~~~~~i~~~~  212 (314)
                      ++..  .|..+.+.++.
T Consensus       233 ~~~~~~~g~~~~~~~g~  249 (252)
T PRK06138        233 DESSFATGTTLVVDGGW  249 (252)
T ss_pred             chhcCccCCEEEECCCe
Confidence            7432  57778887664

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.68  E-value=2.1e-16  Score=133.37  Aligned_cols=204  Identities=13%  Similarity=0.099  Sum_probs=131.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+||.++++.|+++|++|++++|+.........     .+...  ...+.++.+|++|++++..++.+.     .+
T Consensus         8 tG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   82 (259)
T PRK12384          8 IGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQ-----EINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRV   82 (259)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            7999999999999999999999999988654221110     11110  135889999999998888777542     68


Q ss_pred             cEEEEcCCCCc--------------------ccH----HHHHHhCC--C-CCcEEEEeece-eeccCCCCCccCccccch
Q 021331           74 DVVYDINGREA--------------------DEV----EPILDALP--N-LEQFIYCSSAG-VYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        74 d~vi~~a~~~~--------------------~~~----~~~~~~~~--~-~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~k  125 (314)
                      |++||++|...                    .++    +.++..+.  + ..++|++||.. .++...    ...|+.+|
T Consensus        83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~----~~~Y~~sK  158 (259)
T PRK12384         83 DLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKH----NSGYSAAK  158 (259)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCC----CchhHHHH
Confidence            99999998521                    112    23334343  3 35899998854 343322    22588889


Q ss_pred             hhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHc--CCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          126 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       126 ~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      ...+.+++       .+++++.++|||.++++......++.+......  ........++.....+++++|++.+++.++
T Consensus       159 aa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~  238 (259)
T PRK12384        159 FGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYA  238 (259)
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHc
Confidence            87655542       468999999999988764322222222111100  000011122334457889999999999988


Q ss_pred             cCCc--cCCceEEecCCcc
Q 021331          197 GNEK--ASRQVFNISGEKY  213 (314)
Q Consensus       197 ~~~~--~~~~~~~i~~~~~  213 (314)
                      .+..  ..|.+|++.+++.
T Consensus       239 ~~~~~~~~G~~~~v~~g~~  257 (259)
T PRK12384        239 SPKASYCTGQSINVTGGQV  257 (259)
T ss_pred             CcccccccCceEEEcCCEE
Confidence            7532  2578999998864

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.67  E-value=7.9e-16  Score=128.65  Aligned_cols=194  Identities=18%  Similarity=0.232  Sum_probs=129.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-----CCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-----~~~d~   75 (314)
                      |||+|++|.+++++|.++|++|++++|++.+.....     ..+.....++.++.+|+.|++++.++++.     ..+|+
T Consensus        11 tGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (246)
T PRK05653         11 TGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALA-----AELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDI   85 (246)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999875532111     11112235688899999999988887763     24799


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |||+++....                    +..++++++    .  +.++||++||.......   +....|..+|...+
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~---~~~~~y~~sk~~~~  162 (246)
T PRK05653         86 LVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGN---PGQTNYSAAKAGVI  162 (246)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCC---CCCcHhHhHHHHHH
Confidence            9999876321                    123344443    2  55799999986543221   11124777887665


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC--c
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--K  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~--~  200 (314)
                      .+++       ..+++++++||+.++++.... +...........  ++       ...+++.+|+++++..++...  .
T Consensus       163 ~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~-~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~~~~~~~~~~  232 (246)
T PRK05653        163 GFTKALALELASRGITVNAVAPGFIDTDMTEG-LPEEVKAEILKE--IP-------LGRLGQPEEVANAVAFLASDAASY  232 (246)
T ss_pred             HHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh-hhHHHHHHHHhc--CC-------CCCCcCHHHHHHHHHHHcCchhcC
Confidence            5543       357899999999999985321 111111111111  11       145788999999999999753  2


Q ss_pred             cCCceEEecCCc
Q 021331          201 ASRQVFNISGEK  212 (314)
Q Consensus       201 ~~~~~~~i~~~~  212 (314)
                      ..+++|++++|.
T Consensus       233 ~~g~~~~~~gg~  244 (246)
T PRK05653        233 ITGQVIPVNGGM  244 (246)
T ss_pred             ccCCEEEeCCCe
Confidence            357899999886

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=8.5e-16  Score=129.06  Aligned_cols=198  Identities=14%  Similarity=0.078  Sum_probs=127.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-----CCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-----~~~d~   75 (314)
                      |||+|+||++++++|+++|++|++..|+.........    ..+.....++.++.+|+++++++..+++.     .++|+
T Consensus        12 tGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   87 (252)
T PRK06077         12 TGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETL----KMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVADI   87 (252)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH----HHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999887765422111000    01111124567889999999888777653     26899


Q ss_pred             EEEcCCCCcc--------------------cHH----HHHHhCCCCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           76 VYDINGREAD--------------------EVE----PILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~----~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      |||++|....                    +..    .+++.+....+||++||...+....   ....|+.+|...+.+
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---~~~~Y~~sK~~~~~~  164 (252)
T PRK06077         88 LVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAY---GLSIYGAMKAAVINL  164 (252)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCC---CchHHHHHHHHHHHH
Confidence            9999985211                    112    2232333446899999987764322   223688999888777


Q ss_pred             HHh------cCCceEEEecCeeeCCCCCC--chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCC
Q 021331          132 LES------KGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  203 (314)
Q Consensus       132 ~~~------~~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~  203 (314)
                      ++.      .++.+.+++|+.+.++....  ............  ..      .....+++++|+|++++.++..+...+
T Consensus       165 ~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~dva~~~~~~~~~~~~~g  236 (252)
T PRK06077        165 TKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAE--KF------TLMGKILDPEEVAEFVAAILKIESITG  236 (252)
T ss_pred             HHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHH--hc------CcCCCCCCHHHHHHHHHHHhCccccCC
Confidence            642      26889999999887763210  000000000000  01      112358999999999999998665578


Q ss_pred             ceEEecCCcc
Q 021331          204 QVFNISGEKY  213 (314)
Q Consensus       204 ~~~~i~~~~~  213 (314)
                      ++|++.+++.
T Consensus       237 ~~~~i~~g~~  246 (252)
T PRK06077        237 QVFVLDSGES  246 (252)
T ss_pred             CeEEecCCee
Confidence            8999999864

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.67  E-value=8.5e-16  Score=129.25  Aligned_cols=195  Identities=19%  Similarity=0.248  Sum_probs=126.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEE-EcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC--------
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--------   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~--------   71 (314)
                      |||+|+||.+++++|+++|++|+++ .|+..+.....     ..+......+.++.+|++|++++.+++++.        
T Consensus        12 tGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~   86 (254)
T PRK12746         12 TGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETI-----REIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRV   86 (254)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcccc
Confidence            7999999999999999999998875 46543321111     011111245788999999999988877642        


Q ss_pred             ---CccEEEEcCCCCcc--------------------cHHHHHHh----CCCCCcEEEEeeceeeccCCCCCccCccccc
Q 021331           72 ---GFDVVYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCESRHKG  124 (314)
Q Consensus        72 ---~~d~vi~~a~~~~~--------------------~~~~~~~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (314)
                         ++|++||++|....                    ++.++++.    +....++|++||..++....   ....|+.+
T Consensus        87 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~---~~~~Y~~s  163 (254)
T PRK12746         87 GTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFT---GSIAYGLS  163 (254)
T ss_pred             CCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCC---CCcchHhh
Confidence               58999999986321                    12223333    23345899999987764322   12258999


Q ss_pred             hhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          125 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       125 k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      |...+.+.+       ..++++++++|+.++++..........+.......        .....+++++|+|+++..++.
T Consensus       164 K~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~~  235 (254)
T PRK12746        164 KGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNS--------SVFGRIGQVEDIADAVAFLAS  235 (254)
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhc--------CCcCCCCCHHHHHHHHHHHcC
Confidence            988877642       35799999999999887321100000011111111        112346789999999998887


Q ss_pred             CCc--cCCceEEecCC
Q 021331          198 NEK--ASRQVFNISGE  211 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~  211 (314)
                      ++.  ..|++|++.++
T Consensus       236 ~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        236 SDSRWVTGQIIDVSGG  251 (254)
T ss_pred             cccCCcCCCEEEeCCC
Confidence            643  25789999876

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.67  E-value=7e-16  Score=129.86  Aligned_cols=198  Identities=22%  Similarity=0.256  Sum_probs=132.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|.+++++|+++|++|++++|+.++.....     ..+.+.+.++.++.+|+.|++++.++++..     .+|+
T Consensus        16 tGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   90 (255)
T PRK07523         16 TGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAA-----ESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDI   90 (255)
T ss_pred             ECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865432111     112222345888999999999988887642     4899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhCC------CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||++|...                    .++.++++++.      +.+++|++||.......   +....|+.+|...+
T Consensus        91 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---~~~~~y~~sK~a~~  167 (255)
T PRK07523         91 LVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALAR---PGIAPYTATKGAVG  167 (255)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCC---CCCccHHHHHHHHH
Confidence            999998632                    11223333332      45789999996543222   22226888898877


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      .+.+       .+++++.++||+.+.++...... ...+...+....+         ...+.+++|+|++++.++.+.. 
T Consensus       168 ~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~  238 (255)
T PRK07523        168 NLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTP---------AGRWGKVEELVGACVFLASDASS  238 (255)
T ss_pred             HHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCchhc
Confidence            7753       45899999999999887421110 0111122222111         1246679999999999997632 


Q ss_pred             -cCCceEEecCCcccc
Q 021331          201 -ASRQVFNISGEKYVT  215 (314)
Q Consensus       201 -~~~~~~~i~~~~~~s  215 (314)
                       ..|.++++.++...|
T Consensus       239 ~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        239 FVNGHVLYVDGGITAS  254 (255)
T ss_pred             CccCcEEEECCCeecc
Confidence             257899999886544

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.67  E-value=7.7e-16  Score=129.82  Aligned_cols=195  Identities=16%  Similarity=0.173  Sum_probs=128.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.+++++|+++|++|++++|+........     ..+.....++.++.+|++|++++..+++..     ++|+
T Consensus        11 tGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   85 (258)
T PRK07890         11 SGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVA-----AEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDA   85 (258)
T ss_pred             ECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCccE
Confidence            799999999999999999999999999865422111     111111246789999999999888777542     6899


Q ss_pred             EEEcCCCCcc---------------------cHHHHHHhC----C-CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD---------------------EVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~---------------------~~~~~~~~~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+++....                     +...+++++    . ...+||++||...+...   +....|..+|...+
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~---~~~~~Y~~sK~a~~  162 (258)
T PRK07890         86 LVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQ---PKYGAYKMAKGALL  162 (258)
T ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCC---CCcchhHHHHHHHH
Confidence            9999985211                     122333333    2 33589999997654322   22236888998887


Q ss_pred             HHHHh-------cCCceEEEecCeeeCCCCCCchh----------HHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHH
Q 021331          130 SVLES-------KGVNWTSLRPVYIYGPLNYNPVE----------EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  192 (314)
Q Consensus       130 ~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  192 (314)
                      .+++.       .++++++++|+.+++|.....+.          ..+......         ......+.+++|+|+++
T Consensus       163 ~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~a~  233 (258)
T PRK07890        163 AASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAA---------NSDLKRLPTDDEVASAV  233 (258)
T ss_pred             HHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhh---------cCCccccCCHHHHHHHH
Confidence            77642       47999999999999984211000          011111111         11123467899999999


Q ss_pred             HHHhcCC--ccCCceEEecCCc
Q 021331          193 VQVLGNE--KASRQVFNISGEK  212 (314)
Q Consensus       193 ~~~l~~~--~~~~~~~~i~~~~  212 (314)
                      +.+++..  ...|.++.+.++.
T Consensus       234 ~~l~~~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        234 LFLASDLARAITGQTLDVNCGE  255 (258)
T ss_pred             HHHcCHhhhCccCcEEEeCCcc
Confidence            9988752  2356777777765

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.67  E-value=1.2e-15  Score=128.07  Aligned_cols=196  Identities=17%  Similarity=0.199  Sum_probs=128.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEE-EcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.+++++|+++|++|+++ .|+........     ..+.....++.++.+|++|++++..++++.     .+|
T Consensus        10 tGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (250)
T PRK08063         10 TGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETA-----EEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLD   84 (250)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999998774 56544321100     111222356888999999999988888743     589


Q ss_pred             EEEEcCCCCcc--------------------cH----HHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~~--------------------~~----~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +|||++|....                    ++    +.++..+.  +.++||++||...+...   +....|+.+|..+
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---~~~~~y~~sK~a~  161 (250)
T PRK08063         85 VFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYL---ENYTTVGVSKAAL  161 (250)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCC---CCccHHHHHHHHH
Confidence            99999985321                    11    22233332  45699999996654321   1122689999999


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      +.+++       ..++++++++|+.+..+.... +....+........  +       ...+++.+|+|++++.++.++.
T Consensus       162 ~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~dva~~~~~~~~~~~  232 (250)
T PRK08063        162 EALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKT--P-------AGRMVEPEDVANAVLFLCSPEA  232 (250)
T ss_pred             HHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCC--C-------CCCCcCHHHHHHHHHHHcCchh
Confidence            88864       357999999999997763211 00011111111111  0       1236889999999999997643


Q ss_pred             --cCCceEEecCCcc
Q 021331          201 --ASRQVFNISGEKY  213 (314)
Q Consensus       201 --~~~~~~~i~~~~~  213 (314)
                        ..|..+++.++..
T Consensus       233 ~~~~g~~~~~~gg~~  247 (250)
T PRK08063        233 DMIRGQTIIVDGGRS  247 (250)
T ss_pred             cCccCCEEEECCCee
Confidence              2578899988764

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.66  E-value=8.2e-16  Score=120.13  Aligned_cols=250  Identities=18%  Similarity=0.146  Sum_probs=158.5

Q ss_pred             CcccccHHHHHH-----HHHHCC----CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCC
Q 021331            2 GGTRFIGVFLSR-----LLVKEG----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG   72 (314)
Q Consensus         2 GatG~iG~~l~~-----~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~   72 (314)
                      +++|+++..|.-     ++-+.+    |+|++++|++.+.                 ++.+-..|..-..      -  +
T Consensus        19 ~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~-----------------ritw~el~~~Gip------~--s   73 (315)
T KOG3019|consen   19 WSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA-----------------RITWPELDFPGIP------I--S   73 (315)
T ss_pred             ccccchhccccCcccccccCCCCcccccceEEEecCCCCc-----------------ccccchhcCCCCc------e--e
Confidence            568888877766     443334    8999999998772                 2222222221110      0  3


Q ss_pred             ccEEEEcCCCCc--------------------ccHHHHHHhCC----CCCcEEEEeeceeeccCCCCCccC-------cc
Q 021331           73 FDVVYDINGREA--------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCE-------SR  121 (314)
Q Consensus        73 ~d~vi~~a~~~~--------------------~~~~~~~~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e-------~~  121 (314)
                      |++.++++|.|.                    .-++.+.+++.    ..+.+|.+|...+|-.+....++|       .|
T Consensus        74 c~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd~  153 (315)
T KOG3019|consen   74 CVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFDI  153 (315)
T ss_pred             hHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChHH
Confidence            555555555432                    23566777765    345799999999998776666666       11


Q ss_pred             c---cchhhHHHHHHhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          122 H---KGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       122 ~---~~k~~~e~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      .   ..+++..........+.+++|.|.|.|.+...-....+..++..+.++   |++.+...|||++|++..+..++++
T Consensus       154 ~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPl---GsG~Q~fpWIHv~DL~~li~~ale~  230 (315)
T KOG3019|consen  154 LSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPL---GSGQQWFPWIHVDDLVNLIYEALEN  230 (315)
T ss_pred             HHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcC---CCCCeeeeeeehHHHHHHHHHHHhc
Confidence            1   112222111122348899999999999864322222233444555654   8999999999999999999999999


Q ss_pred             CccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccc--cCCCCcccCCCcceeecHHhHHhhcCCCcccC-
Q 021331          199 EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFD--FGKKKAFPFRDQHFFASVEKAKHVLGWKPEFD-  275 (314)
Q Consensus       199 ~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~-  275 (314)
                      +.. .++.|-..+++++..||.+.+.++++++.  +.++|...+.  +|...+.-.. .-...-..|+. ++||+.+|+ 
T Consensus       231 ~~v-~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~--~~pvP~fvvqA~fG~erA~~vL-eGqKV~Pqral-~~Gf~f~yp~  305 (315)
T KOG3019|consen  231 PSV-KGVINGVAPNPVRNGEFCQQLGSALSRPS--WLPVPDFVVQALFGPERATVVL-EGQKVLPQRAL-ELGFEFKYPY  305 (315)
T ss_pred             CCC-CceecccCCCccchHHHHHHHHHHhCCCc--ccCCcHHHHHHHhCccceeEEe-eCCcccchhHh-hcCceeechH
Confidence            775 45999999999999999999999999764  3334432221  2321111111 11112234554 489999986 


Q ss_pred             hHHHHHHHH
Q 021331          276 LVEGLADSY  284 (314)
Q Consensus       276 ~~~~l~~~~  284 (314)
                      +.+++++..
T Consensus       306 vk~Al~~i~  314 (315)
T KOG3019|consen  306 VKDALRAIM  314 (315)
T ss_pred             HHHHHHHHh
Confidence            888888754

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.66  E-value=7.5e-16  Score=131.52  Aligned_cols=201  Identities=14%  Similarity=0.115  Sum_probs=129.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-----CCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-----~~~d~   75 (314)
                      |||+|++|.++++.|+++|++|++++|+.+........ .  ...+...++.++.+|++|++++.. +++     -.+|+
T Consensus         9 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~-~--~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~   84 (280)
T PRK06914          9 TGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQ-A--TQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDL   84 (280)
T ss_pred             ECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHH-H--HhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCeeE
Confidence            79999999999999999999999999986543211100 0  000012468899999999988776 432     15799


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHh----CC--CCCcEEEEeecee-eccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGV-YLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~k~~~  128 (314)
                      |||++|...                    .++.++++.    +.  +..+||++||... ++....    ..|+.+|...
T Consensus        85 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~----~~Y~~sK~~~  160 (280)
T PRK06914         85 LVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGL----SPYVSSKYAL  160 (280)
T ss_pred             EEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCC----chhHHhHHHH
Confidence            999998632                    112233333    43  5578999998543 332222    2588888887


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCc------------hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHH
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNP------------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  189 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  189 (314)
                      +.+++       .++++++++||+.++++.....            ........+....       ......+++++|+|
T Consensus       161 ~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~dva  233 (280)
T PRK06914        161 EGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHI-------NSGSDTFGNPIDVA  233 (280)
T ss_pred             HHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHH-------hhhhhccCCHHHHH
Confidence            77654       3589999999999988731100            0001111111000       01123578899999


Q ss_pred             HHHHHHhcCCccCCceEEecCCccccHH
Q 021331          190 RAFVQVLGNEKASRQVFNISGEKYVTFD  217 (314)
Q Consensus       190 ~~~~~~l~~~~~~~~~~~i~~~~~~s~~  217 (314)
                      ++++.+++++.. ...|+++++..+++.
T Consensus       234 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~  260 (280)
T PRK06914        234 NLIVEIAESKRP-KLRYPIGKGVKLMIL  260 (280)
T ss_pred             HHHHHHHcCCCC-CcccccCCchHHHHH
Confidence            999999998764 357888877665544

>PRK06182 short chain dehydrogenase; Validated

Probab=99.66  E-value=6.8e-16  Score=131.29  Aligned_cols=191  Identities=17%  Similarity=0.121  Sum_probs=126.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|.+++++|+++|++|++++|+.+......           ..++.++.+|++|++++.++++..     ++|+
T Consensus         9 tGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-----------~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~   77 (273)
T PRK06182          9 TGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-----------SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV   77 (273)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999876532111           135888999999999988887643     6899


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||++|....                    +    ++.++..+.  +..++|++||.+.+..   .|....|..+|...+
T Consensus        78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~---~~~~~~Y~~sKaa~~  154 (273)
T PRK06182         78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIY---TPLGAWYHATKFALE  154 (273)
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCC---CCCccHhHHHHHHHH
Confidence            9999986321                    1    344555554  4578999999654321   222235888998888


Q ss_pred             HHH-------HhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCC---Ce--------ecCCCCCceeeeeeHHHHHHH
Q 021331          130 SVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR---PI--------PIPGSGIQVTQLGHVKDLARA  191 (314)
Q Consensus       130 ~~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~---~~--------~~~~~~~~~~~~i~~~D~a~~  191 (314)
                      .+.       ..++++++++||+.+.++....     ....+....   ..        ...........+.+.+|+|++
T Consensus       155 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~  229 (273)
T PRK06182        155 GFSDALRLEVAPFGIDVVVIEPGGIKTEWGDI-----AADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADA  229 (273)
T ss_pred             HHHHHHHHHhcccCCEEEEEecCCcccccchh-----hhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHH
Confidence            764       2468999999999998873210     000000000   00        000011112356789999999


Q ss_pred             HHHHhcCCccCCceEEecCC
Q 021331          192 FVQVLGNEKASRQVFNISGE  211 (314)
Q Consensus       192 ~~~~l~~~~~~~~~~~i~~~  211 (314)
                      ++.++.... ....|+++.+
T Consensus       230 i~~~~~~~~-~~~~~~~g~~  248 (273)
T PRK06182        230 ISKAVTARR-PKTRYAVGFG  248 (273)
T ss_pred             HHHHHhCCC-CCceeecCcc
Confidence            999998643 2456776554

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.66  E-value=1.6e-15  Score=127.24  Aligned_cols=196  Identities=16%  Similarity=0.166  Sum_probs=130.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|.+++++|+++|++|++++|+.........     .+.. ..++.++.+|+.|++++..++++.     ++|+
T Consensus        11 tGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   84 (251)
T PRK07231         11 TGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAA-----EILA-GGRAIAVAADVSDEADVEAAVAAALERFGSVDI   84 (251)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999999755321111     0110 245789999999999998887643     6899


Q ss_pred             EEEcCCCCcc-------------------------cHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREAD-------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~-------------------------~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      |||+++....                         .++.++..+.  +.++||++||...+.....   ...|..+|...
T Consensus        85 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---~~~y~~sk~~~  161 (251)
T PRK07231         85 LVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPG---LGWYNASKGAV  161 (251)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCC---chHHHHHHHHH
Confidence            9999986311                         1233444443  5678999999777653322   22588888777


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchh---HHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE---EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      +.+++       ..+++++.++|+.+.++.......   ..........         .....+++++|+|++++.++..
T Consensus       162 ~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~  232 (251)
T PRK07231        162 ITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLAT---------IPLGRLGTPEDIANAALFLASD  232 (251)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcC---------CCCCCCcCHHHHHHHHHHHhCc
Confidence            66553       247999999999987653211100   0111111111         1123578999999999999976


Q ss_pred             Cc--cCCceEEecCCccc
Q 021331          199 EK--ASRQVFNISGEKYV  214 (314)
Q Consensus       199 ~~--~~~~~~~i~~~~~~  214 (314)
                      +.  ..|..+.+.++..+
T Consensus       233 ~~~~~~g~~~~~~gg~~~  250 (251)
T PRK07231        233 EASWITGVTLVVDGGRCV  250 (251)
T ss_pred             cccCCCCCeEEECCCccC
Confidence            43  24677888776533

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.3e-15  Score=129.74  Aligned_cols=186  Identities=17%  Similarity=0.140  Sum_probs=121.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......        ....++..+.+|++|++++.++++..     ++|+
T Consensus        10 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~--------~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~   81 (277)
T PRK06180         10 TGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEA--------LHPDRALARLLDVTDFDAIDAVVADAEATFGPIDV   81 (277)
T ss_pred             ecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHh--------hcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998765321111        01246888999999999888877632     5899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |||++|...                    .++.+++++    +.  +..++|++||...+...   |....|+.+|..++
T Consensus        82 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~---~~~~~Y~~sK~a~~  158 (277)
T PRK06180         82 LVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM---PGIGYYCGSKFALE  158 (277)
T ss_pred             EEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC---CCcchhHHHHHHHH
Confidence            999998732                    123344444    32  45689999997655322   22236889998877


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCc------hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNP------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      .+.+       .++++++++||+.+.++.....      ....................   ...+.+++|+|++++.++
T Consensus       159 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~~~~~l  235 (277)
T PRK06180        159 GISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKS---GKQPGDPAKAAQAILAAV  235 (277)
T ss_pred             HHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhc---cCCCCCHHHHHHHHHHHH
Confidence            7653       2589999999999977632110      01111110000000000001   123567899999999999


Q ss_pred             cCCc
Q 021331          197 GNEK  200 (314)
Q Consensus       197 ~~~~  200 (314)
                      .++.
T Consensus       236 ~~~~  239 (277)
T PRK06180        236 ESDE  239 (277)
T ss_pred             cCCC
Confidence            8765

>PRK06128 oxidoreductase; Provisional

Probab=99.66  E-value=1.8e-15  Score=130.31  Aligned_cols=198  Identities=19%  Similarity=0.248  Sum_probs=132.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccc-cCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|++.|++|+++.++.+... ..+    ...+.....++.++.+|++|++++.+++++.     ++|
T Consensus        61 TGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD  136 (300)
T PRK06128         61 TGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEV----VQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLD  136 (300)
T ss_pred             ecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHH----HHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999998877543211 000    0112222356788999999999888877642     689


Q ss_pred             EEEEcCCCCc---------------------ccHHHHHHh----CCCCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           75 VVYDINGREA---------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        75 ~vi~~a~~~~---------------------~~~~~~~~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      ++||+||...                     .++..++++    +....++|++||...|.....   ...|+.+|...+
T Consensus       137 ~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~---~~~Y~asK~a~~  213 (300)
T PRK06128        137 ILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPT---LLDYASTKAAIV  213 (300)
T ss_pred             EEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCC---chhHHHHHHHHH
Confidence            9999998521                     112233333    333458999999887754322   225899998887


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      .+.+       ..|+++++++||.+.++.... .........+....         ....+.+.+|+|.+++.++.... 
T Consensus       214 ~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~---------p~~r~~~p~dva~~~~~l~s~~~~  284 (300)
T PRK06128        214 AFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSET---------PMKRPGQPVEMAPLYVLLASQESS  284 (300)
T ss_pred             HHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCC---------CCCCCcCHHHHHHHHHHHhCcccc
Confidence            7764       258999999999999985321 11122222222111         11246678999999999987633 


Q ss_pred             -cCCceEEecCCccc
Q 021331          201 -ASRQVFNISGEKYV  214 (314)
Q Consensus       201 -~~~~~~~i~~~~~~  214 (314)
                       ..|++|++.++..+
T Consensus       285 ~~~G~~~~v~gg~~~  299 (300)
T PRK06128        285 YVTGEVFGVTGGLLL  299 (300)
T ss_pred             CccCcEEeeCCCEeC
Confidence             26889999998654

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.65  E-value=2.9e-15  Score=117.88  Aligned_cols=264  Identities=15%  Similarity=0.062  Sum_probs=181.7

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      |||-|.+|..++..|..+ |.+-++++--..+....+            ..-.++..|+.|...++++.-...+|.+||+
T Consensus        50 TG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~------------~~GPyIy~DILD~K~L~eIVVn~RIdWL~Hf  117 (366)
T KOG2774|consen   50 TGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT------------DVGPYIYLDILDQKSLEEIVVNKRIDWLVHF  117 (366)
T ss_pred             ecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc------------ccCCchhhhhhccccHHHhhcccccceeeeH
Confidence            799999999999999877 765555543222212222            3456788999999999999887789999998


Q ss_pred             CCC---------------CcccHHHHHHhCC-CCCcEEEEeeceeeccCCCC-CccC--------ccccchhhHHH----
Q 021331           80 NGR---------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLL-PHCE--------SRHKGKLNTES----  130 (314)
Q Consensus        80 a~~---------------~~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~-~~~e--------~~~~~k~~~e~----  130 (314)
                      .+.               |+.++.|+++.+. ..-++..-||.+.||..... |-..        -|+.+|.-+|-    
T Consensus       118 SALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy  197 (366)
T KOG2774|consen  118 SALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEY  197 (366)
T ss_pred             HHHHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHH
Confidence            442               6778999999988 33366667889999864322 2211        57877766554    


Q ss_pred             HHHhcCCceEEEecCeeeCC---CC-CCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCcc--CCc
Q 021331          131 VLESKGVNWTSLRPVYIYGP---LN-YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA--SRQ  204 (314)
Q Consensus       131 ~~~~~~~~~~ilR~~~v~g~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~--~~~  204 (314)
                      +-...|+++-.+|++.+...   +. ........+..++.+.....+-.++....++|.+|+.++++.++..+..  +..
T Consensus       198 ~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkrr  277 (366)
T KOG2774|consen  198 FNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKRR  277 (366)
T ss_pred             HHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHHhhhh
Confidence            34567899999998888764   21 1222233333444444445556778889999999999999999987653  568


Q ss_pred             eEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHH
Q 021331          205 VFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSY  284 (314)
Q Consensus       205 ~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~  284 (314)
                      +||+++ ...|-.|+++++.+++..-  .+. +.+....      .-.+..++.+|.+.++.++-|+.++.+...+.-++
T Consensus       278 ~ynvt~-~sftpee~~~~~~~~~p~~--~i~-y~~~srq------~iad~wp~~~dds~ar~~wh~~h~~~l~~~i~~~i  347 (366)
T KOG2774|consen  278 TYNVTG-FSFTPEEIADAIRRVMPGF--EID-YDICTRQ------SIADSWPMSLDDSEARTEWHEKHSLHLLSIISTVV  347 (366)
T ss_pred             eeeece-eccCHHHHHHHHHhhCCCc--eee-cccchhh------hhhhhcccccCchhHhhHHHHhhhhhHHHHHHHHH
Confidence            999987 5599999999999987632  221 1111100      11123566688999999988888877777666665


Q ss_pred             hh
Q 021331          285 NL  286 (314)
Q Consensus       285 ~~  286 (314)
                      .-
T Consensus       348 ~~  349 (366)
T KOG2774|consen  348 AV  349 (366)
T ss_pred             HH
Confidence            53

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.65  E-value=4.6e-15  Score=124.94  Aligned_cols=198  Identities=18%  Similarity=0.245  Sum_probs=128.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.........    ..+.....++.++.+|++|++++.++++..     .+|+
T Consensus         8 tG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (256)
T PRK12745          8 TGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQ----QELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDC   83 (256)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999987543110000    111112346889999999998888776533     6899


Q ss_pred             EEEcCCCCc----------------------ccHHHHHHhC----C---C-----CCcEEEEeeceeeccCCCCCccCcc
Q 021331           76 VYDINGREA----------------------DEVEPILDAL----P---N-----LEQFIYCSSAGVYLKSDLLPHCESR  121 (314)
Q Consensus        76 vi~~a~~~~----------------------~~~~~~~~~~----~---~-----~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (314)
                      |||++|...                      .++.++++++    .   +     ..++|++||...+....   ....|
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---~~~~Y  160 (256)
T PRK12745         84 LVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSP---NRGEY  160 (256)
T ss_pred             EEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCC---CCccc
Confidence            999998521                      1122333332    1   1     45799999966543221   11258


Q ss_pred             ccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHH
Q 021331          122 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       122 ~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                      +.+|...+.+++       .++++++++||+.+.++.... ....+...... ...+       ...+.+.+|+++++..
T Consensus       161 ~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~-~~~~~~~~~~~-~~~~-------~~~~~~~~d~a~~i~~  231 (256)
T PRK12745        161 CISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP-VTAKYDALIAK-GLVP-------MPRWGEPEDVARAVAA  231 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc-cchhHHhhhhh-cCCC-------cCCCcCHHHHHHHHHH
Confidence            888988877653       367999999999998874321 11111111111 1111       1346789999999998


Q ss_pred             HhcCCc--cCCceEEecCCccc
Q 021331          195 VLGNEK--ASRQVFNISGEKYV  214 (314)
Q Consensus       195 ~l~~~~--~~~~~~~i~~~~~~  214 (314)
                      ++....  ..|++|++.++...
T Consensus       232 l~~~~~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        232 LASGDLPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             HhCCcccccCCCEEEECCCeec
Confidence            886532  35789999887543

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.65  E-value=2.3e-15  Score=126.10  Aligned_cols=195  Identities=20%  Similarity=0.187  Sum_probs=125.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.+++++|+++|++|++..++........    ...+.....++.++.+|++|.+++.++++..     .+|+
T Consensus         8 tG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (248)
T PRK06123          8 TGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAV----VQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLDA   83 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHH----HHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999887765432211111    0111112345778999999999888887632     5899


Q ss_pred             EEEcCCCCcc---------------------cHHHHHHhCC-----C----CCcEEEEeece-eeccCCCCCccCccccc
Q 021331           76 VYDINGREAD---------------------EVEPILDALP-----N----LEQFIYCSSAG-VYLKSDLLPHCESRHKG  124 (314)
Q Consensus        76 vi~~a~~~~~---------------------~~~~~~~~~~-----~----~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~  124 (314)
                      |||+++....                     ++.++++++.     .    ..++|++||.. .++.....   ..|+.+
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~---~~Y~~s  160 (248)
T PRK06123         84 LVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEY---IDYAAS  160 (248)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCc---cchHHH
Confidence            9999986321                     1222333322     1    23689999964 44432211   148999


Q ss_pred             hhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          125 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       125 k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      |...+.+++       .++++++++||+.+++|.......+..........++.         -+.+++|++++++.++.
T Consensus       161 Kaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~---------~~~~~~d~a~~~~~l~~  231 (248)
T PRK06123        161 KGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMG---------RGGTAEEVARAILWLLS  231 (248)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhC
Confidence            998887653       24899999999999998432211222222232222221         12368999999999887


Q ss_pred             CCc--cCCceEEecCC
Q 021331          198 NEK--ASRQVFNISGE  211 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~  211 (314)
                      ...  ..|+.|++.++
T Consensus       232 ~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        232 DEASYTTGTFIDVSGG  247 (248)
T ss_pred             ccccCccCCEEeecCC
Confidence            532  36789998775

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.65  E-value=2.3e-15  Score=127.96  Aligned_cols=213  Identities=15%  Similarity=0.132  Sum_probs=133.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.+++++.     .+|+
T Consensus        12 TGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   86 (275)
T PRK05876         12 TGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAV-----NHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVDV   86 (275)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998865432111     112212345788999999999988887643     5899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHh----CC--C-CCcEEEEeeceeeccCCCCCccCccccchhh-
Q 021331           76 VYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCESRHKGKLN-  127 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~-  127 (314)
                      +||+||...                    .+..+++++    +.  + ..++|++||...+...   +....|+.+|.. 
T Consensus        87 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asK~a~  163 (275)
T PRK05876         87 VFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN---AGLGAYGVAKYGV  163 (275)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC---CCCchHHHHHHHH
Confidence            999998621                    122333333    22  2 4689999997665432   222258888876 


Q ss_pred             ---HHHHHH---hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCcc
Q 021331          128 ---TESVLE---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  201 (314)
Q Consensus       128 ---~e~~~~---~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~  201 (314)
                         ++.+..   ..++++++++|+.+.++..... .................+......++++++|+|++++.++.++  
T Consensus       164 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~--  240 (275)
T PRK05876        164 VGLAETLAREVTADGIGVSVLCPMVVETNLVANS-ERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN--  240 (275)
T ss_pred             HHHHHHHHHHhhhcCcEEEEEEeCccccccccch-hhhcCccccccccccccccccccccCCCHHHHHHHHHHHHHcC--
Confidence               344333   3589999999999887632111 0000000001111112233334467899999999999999754  


Q ss_pred             CCceEEecCCccccHHHHHHHHHHHhC
Q 021331          202 SRQVFNISGEKYVTFDGLARACAKAAG  228 (314)
Q Consensus       202 ~~~~~~i~~~~~~s~~el~~~i~~~~g  228 (314)
                        +.+.+.+.  ..+..+.+...+...
T Consensus       241 --~~~~~~~~--~~~~~~~~~~~~~~~  263 (275)
T PRK05876        241 --RLYVLPHA--ASRASIRRRFERIDR  263 (275)
T ss_pred             --CeEEecCh--hhHHHHHHHHHHHHH
Confidence              34555432  455555555555443

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.64  E-value=9.6e-16  Score=128.60  Aligned_cols=195  Identities=18%  Similarity=0.189  Sum_probs=128.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|.+++++|+++|++|++++|+.+......     ..+.+...++.++.+|+.|.+++++++...     ++|+
T Consensus         9 tGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~   83 (250)
T TIGR03206         9 TGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVA-----ADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDV   83 (250)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998875422110     011112356889999999999888877532     5899


Q ss_pred             EEEcCCCCc--------------------ccHHHH----HHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEVEPI----LDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~----~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+++...                    .+..++    +..+.  +.+++|++||...+.....   ...|+.+|...+
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~---~~~Y~~sK~a~~  160 (250)
T TIGR03206        84 LVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSG---EAVYAACKGGLV  160 (250)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCC---CchHHHHHHHHH
Confidence            999998521                    112223    33332  4578999999877654332   225888887666


Q ss_pred             HHHH----h---cCCceEEEecCeeeCCCCCCc-----hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          130 SVLE----S---KGVNWTSLRPVYIYGPLNYNP-----VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       130 ~~~~----~---~~~~~~ilR~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      .+.+    +   .+++++++||+.++++.....     ....+........+         ...+...+|+|+++..++.
T Consensus       161 ~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~  231 (250)
T TIGR03206       161 AFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIP---------LGRLGQPDDLPGAILFFSS  231 (250)
T ss_pred             HHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCC---------ccCCcCHHHHHHHHHHHcC
Confidence            5543    2   479999999999988731100     00011111111111         1234567999999999887


Q ss_pred             CCc--cCCceEEecCCc
Q 021331          198 NEK--ASRQVFNISGEK  212 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~  212 (314)
                      .+.  ..|+++++.++.
T Consensus       232 ~~~~~~~g~~~~~~~g~  248 (250)
T TIGR03206       232 DDASFITGQVLSVSGGL  248 (250)
T ss_pred             cccCCCcCcEEEeCCCc
Confidence            643  257899998764

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.64  E-value=3.1e-15  Score=125.21  Aligned_cols=195  Identities=19%  Similarity=0.266  Sum_probs=126.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||||++|.++++.|+++|++|+++.|+..+......    ..+.....++.++.+|+.|++++.+++++.     ++|+
T Consensus        11 tG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (248)
T PRK05557         11 TGASRGIGRAIAERLAAQGANVVINYASSEAGAEALV----AEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVDI   86 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999888887653111110    111112356888999999999888877632     6899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhCC------CCCcEEEEeece-eeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA--------------------DEVEPILDALP------NLEQFIYCSSAG-VYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~~------~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      |||+++...                    .+..++++++.      +.++||++||.. .++...    ...|..+|...
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~----~~~y~~sk~a~  162 (248)
T PRK05557         87 LVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPG----QANYAASKAGV  162 (248)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCC----CchhHHHHHHH
Confidence            999998622                    11233343332      446899999853 344322    22578888877


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC--C
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN--E  199 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~--~  199 (314)
                      +.+++       ..++++++++|+.+.++.. ......+........+         ...+.+++|+++++..++..  .
T Consensus       163 ~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~~~~  232 (248)
T PRK05557        163 IGFTKSLARELASRGITVNAVAPGFIETDMT-DALPEDVKEAILAQIP---------LGRLGQPEEIASAVAFLASDEAA  232 (248)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEecCccCCccc-cccChHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCcccC
Confidence            65543       3579999999998765522 1222222222222221         12356889999999988865  3


Q ss_pred             ccCCceEEecCCcc
Q 021331          200 KASRQVFNISGEKY  213 (314)
Q Consensus       200 ~~~~~~~~i~~~~~  213 (314)
                      ...++.|++.++..
T Consensus       233 ~~~g~~~~i~~~~~  246 (248)
T PRK05557        233 YITGQTLHVNGGMV  246 (248)
T ss_pred             CccccEEEecCCcc
Confidence            33678999987743

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.64  E-value=4.6e-15  Score=112.45  Aligned_cols=185  Identities=22%  Similarity=0.318  Sum_probs=131.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      +||||.+|++++++++++||+|+++.|++++...             ..++.+.+.|+.|++++.+.+.  +.|+||.+.
T Consensus         6 IgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~-------------~~~~~i~q~Difd~~~~a~~l~--g~DaVIsA~   70 (211)
T COG2910           6 IGASGKAGSRILKEALKRGHEVTAIVRNASKLAA-------------RQGVTILQKDIFDLTSLASDLA--GHDAVISAF   70 (211)
T ss_pred             EecCchhHHHHHHHHHhCCCeeEEEEeChHhccc-------------cccceeecccccChhhhHhhhc--CCceEEEec
Confidence            4899999999999999999999999999987431             1468889999999999999998  999999886


Q ss_pred             CCCccc--------HHHHHHhCC--CCCcEEEEeeceeec-cCC-----CCCccC-ccccchhhHHHH--HH-hcCCceE
Q 021331           81 GREADE--------VEPILDALP--NLEQFIYCSSAGVYL-KSD-----LLPHCE-SRHKGKLNTESV--LE-SKGVNWT  140 (314)
Q Consensus        81 ~~~~~~--------~~~~~~~~~--~~~~~i~~Ss~~v~~-~~~-----~~~~~e-~~~~~k~~~e~~--~~-~~~~~~~  140 (314)
                      +....+        .+.+++.++  ++.|++.++.++..- +.+     ..+.++ .|..++..+|.+  ++ +.+++||
T Consensus        71 ~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WT  150 (211)
T COG2910          71 GAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWT  150 (211)
T ss_pred             cCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhccCcceE
Confidence            654222        234666666  778998888765432 211     111222 344555566532  33 4459999


Q ss_pred             EEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEec
Q 021331          141 SLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS  209 (314)
Q Consensus       141 ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~  209 (314)
                      .+.|+.++-|+.....+.      ..+..+.....+   -++|+..|.|-+++..++++.+..+.|.+.
T Consensus       151 fvSPaa~f~PGerTg~yr------lggD~ll~n~~G---~SrIS~aDYAiA~lDe~E~~~h~rqRftv~  210 (211)
T COG2910         151 FVSPAAFFEPGERTGNYR------LGGDQLLVNAKG---ESRISYADYAIAVLDELEKPQHIRQRFTVA  210 (211)
T ss_pred             EeCcHHhcCCccccCceE------eccceEEEcCCC---ceeeeHHHHHHHHHHHHhcccccceeeeec
Confidence            999999999976543211      122223332222   378999999999999999998878777664

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.64  E-value=1.7e-15  Score=128.08  Aligned_cols=201  Identities=18%  Similarity=0.180  Sum_probs=126.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|.+++++|+++|++|++++|+.+.......     ...  ..++.++.+|++|++++.+++++.     ++|+
T Consensus        17 tGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   89 (264)
T PRK12829         17 TGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAA-----RLP--GAKVTATVADVADPAQVERVFDTAVERFGGLDV   89 (264)
T ss_pred             eCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHh--cCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999997654221110     000  124688999999999888877642     6899


Q ss_pred             EEEcCCCC-cc--------------------cHHHHHHh----CC--CC-CcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           76 VYDINGRE-AD--------------------EVEPILDA----LP--NL-EQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~-~~--------------------~~~~~~~~----~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      |||+++.. ..                    ++..++++    +.  +. ++|+++||......   .+....|+.+|..
T Consensus        90 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~---~~~~~~y~~~K~a  166 (264)
T PRK12829         90 LVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLG---YPGRTPYAASKWA  166 (264)
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccC---CCCCchhHHHHHH
Confidence            99999864 11                    12223333    22  33 56888887543211   1122258888888


Q ss_pred             HHHHHHh-------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecC---CCCCceeeeeeHHHHHHHHHHHhc
Q 021331          128 TESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP---GSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       128 ~e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      .+.+++.       .+++++++||+.++++.... ......... ........   ........+++++|+|+++..++.
T Consensus       167 ~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~  244 (264)
T PRK12829        167 VVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRR-VIEARAQQL-GIGLDEMEQEYLEKISLGRMVEPEDIAATALFLAS  244 (264)
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHH-Hhhhhhhcc-CCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence            7777642       47999999999999984211 111000000 00000000   000112358999999999998886


Q ss_pred             CC--ccCCceEEecCCcc
Q 021331          198 NE--KASRQVFNISGEKY  213 (314)
Q Consensus       198 ~~--~~~~~~~~i~~~~~  213 (314)
                      ..  ...++.|++.++..
T Consensus       245 ~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        245 PAARYITGQAISVDGNVE  262 (264)
T ss_pred             ccccCccCcEEEeCCCcc
Confidence            42  23678999998753

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.64  E-value=5e-15  Score=126.87  Aligned_cols=197  Identities=19%  Similarity=0.227  Sum_probs=131.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.......+.    ..+.....++.++.+|+.|.+.+.++++..     ++|+
T Consensus        52 tGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~  127 (290)
T PRK06701         52 TGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETK----QRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDI  127 (290)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999987543111110    111111346788999999999888877642     6899


Q ss_pred             EEEcCCCCc---------------------ccHHHHHHhC----CCCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           76 VYDINGREA---------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        76 vi~~a~~~~---------------------~~~~~~~~~~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      |||+|+...                     .+..++++++    ....++|++||...+.....   ...|..+|...+.
T Consensus       128 lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~---~~~Y~~sK~a~~~  204 (290)
T PRK06701        128 LVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET---LIDYSATKGAIHA  204 (290)
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC---cchhHHHHHHHHH
Confidence            999998521                     1122333332    23358999999877754322   2358888888777


Q ss_pred             HHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--c
Q 021331          131 VLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--A  201 (314)
Q Consensus       131 ~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~  201 (314)
                      +++       ..+++++.++||.++.+...............         .......+.+.+|+|++++.++....  .
T Consensus       205 l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~~~~ll~~~~~~~  275 (290)
T PRK06701        205 FTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFG---------SNTPMQRPGQPEELAPAYVFLASPDSSYI  275 (290)
T ss_pred             HHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHH---------hcCCcCCCcCHHHHHHHHHHHcCcccCCc
Confidence            653       24799999999999887432211111111111         11122457889999999999998642  3


Q ss_pred             CCceEEecCCcc
Q 021331          202 SRQVFNISGEKY  213 (314)
Q Consensus       202 ~~~~~~i~~~~~  213 (314)
                      .|.++++.++..
T Consensus       276 ~G~~i~idgg~~  287 (290)
T PRK06701        276 TGQMLHVNGGVI  287 (290)
T ss_pred             cCcEEEeCCCcc
Confidence            678899988753

>PRK06194 hypothetical protein; Provisional

Probab=99.64  E-value=3.5e-15  Score=127.81  Aligned_cols=197  Identities=15%  Similarity=0.144  Sum_probs=129.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......     .+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        12 tGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~   86 (287)
T PRK06194         12 TGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVA-----ELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHL   86 (287)
T ss_pred             eCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-----HHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999987654221110     11111246788999999999998887632     4799


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHh----CC--C------CCcEEEEeeceeeccCCCCCccCcccc
Q 021331           76 VYDINGREAD--------------------EVEPILDA----LP--N------LEQFIYCSSAGVYLKSDLLPHCESRHK  123 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~----~~--~------~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (314)
                      |||+||....                    ++.+++++    +.  .      ..++|++||...+....   ....|+.
T Consensus        87 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---~~~~Y~~  163 (287)
T PRK06194         87 LFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPP---AMGIYNV  163 (287)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC---CCcchHH
Confidence            9999987321                    12222222    22  1      25899999976654322   2225899


Q ss_pred             chhhHHHHHHh----c-----CCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHH
Q 021331          124 GKLNTESVLES----K-----GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       124 ~k~~~e~~~~~----~-----~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                      +|...+.+++.    +     ++++..+.|+.+..+          +.....+++..+.+++.+.+++++++|.+..+..
T Consensus       164 sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (287)
T PRK06194        164 SKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTG----------IWQSERNRPADLANTAPPTRSQLIAQAMSQKAVG  233 (287)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCc----------cccccccCchhcccCccccchhhHHHHHHHhhhh
Confidence            99988877642    2     245555666554332          1122233455556777788889999988876532


Q ss_pred             HhcCCccCCceEEecCCccccHHHHHHHHHHHhCCCC
Q 021331          195 VLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPE  231 (314)
Q Consensus       195 ~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  231 (314)
                      ..                .++..|+++.+.+.+....
T Consensus       234 ~~----------------~~s~~dva~~i~~~~~~~~  254 (287)
T PRK06194        234 SG----------------KVTAEEVAQLVFDAIRAGR  254 (287)
T ss_pred             cc----------------CCCHHHHHHHHHHHHHcCC
Confidence            21                1788999999998776443

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.64  E-value=4.4e-15  Score=124.55  Aligned_cols=196  Identities=14%  Similarity=0.120  Sum_probs=131.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-----CCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-----~~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++.     .++|+
T Consensus        13 tGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   87 (250)
T PRK12939         13 TGAARGLGAAFAEALAEAGATVAFNDGLAAEARELA-----AALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDG   87 (250)
T ss_pred             eCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999988865432111     11111235688999999999998887754     26899


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |||++|....                    +..++++++    .  +..+||++||...+.....   ...|..+|...+
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---~~~y~~sK~~~~  164 (250)
T PRK12939         88 LVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPK---LGAYVASKGAVI  164 (250)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCC---cchHHHHHHHHH
Confidence            9999986321                    122333332    2  3458999999665432221   125888898888


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+++       ..++.++.++|+.+..+.........+.......         .....+++++|+|++++.++..+.  
T Consensus       165 ~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~  235 (250)
T PRK12939        165 GMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKG---------RALERLQVPDDVAGAVLFLLSDAARF  235 (250)
T ss_pred             HHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCccccC
Confidence            7764       2578999999998877642211101122222211         122357889999999999997642  


Q ss_pred             cCCceEEecCCcc
Q 021331          201 ASRQVFNISGEKY  213 (314)
Q Consensus       201 ~~~~~~~i~~~~~  213 (314)
                      ..|+.+.+.++..
T Consensus       236 ~~G~~i~~~gg~~  248 (250)
T PRK12939        236 VTGQLLPVNGGFV  248 (250)
T ss_pred             ccCcEEEECCCcc
Confidence            3788999988753

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.63  E-value=2.7e-15  Score=125.48  Aligned_cols=190  Identities=16%  Similarity=0.187  Sum_probs=128.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-CccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi~~   79 (314)
                      |||+|++|.++++.|+++|++|++++|+.+.......          ..+..++.+|+++++.+.++++.. ++|+|||+
T Consensus        15 tGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~   84 (245)
T PRK07060         15 TGASSGIGRACAVALAQRGARVVAAARNAAALDRLAG----------ETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC   84 (245)
T ss_pred             eCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------HhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence            7999999999999999999999999998654321111          124678899999999888888743 48999999


Q ss_pred             CCCCc--------------------ccHHHHHHhCC-----C--CCcEEEEeeceeeccCCCCCccCccccchhhHHHHH
Q 021331           80 NGREA--------------------DEVEPILDALP-----N--LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVL  132 (314)
Q Consensus        80 a~~~~--------------------~~~~~~~~~~~-----~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~  132 (314)
                      ++...                    .+..++++++.     .  ..+||++||...+.....   ...|..+|..++.++
T Consensus        85 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---~~~y~~sK~a~~~~~  161 (245)
T PRK07060         85 AGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPD---HLAYCASKAALDAIT  161 (245)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCC---CcHhHHHHHHHHHHH
Confidence            98632                    11223333332     1  368999999765533221   125889998888766


Q ss_pred             H-------hcCCceEEEecCeeeCCCCCCchh-HHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cC
Q 021331          133 E-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--AS  202 (314)
Q Consensus       133 ~-------~~~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~  202 (314)
                      +       ..+++++.+||+.++++.....+. ......+...         .....+++++|+|++++.++..+.  ..
T Consensus       162 ~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~d~a~~~~~l~~~~~~~~~  232 (245)
T PRK07060        162 RVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAA---------IPLGRFAEVDDVAAPILFLLSDAASMVS  232 (245)
T ss_pred             HHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCcccCCcc
Confidence            3       247999999999999885321110 0111111111         112358899999999999998643  25


Q ss_pred             CceEEecCCc
Q 021331          203 RQVFNISGEK  212 (314)
Q Consensus       203 ~~~~~i~~~~  212 (314)
                      |+++++.++.
T Consensus       233 G~~~~~~~g~  242 (245)
T PRK07060        233 GVSLPVDGGY  242 (245)
T ss_pred             CcEEeECCCc
Confidence            7889888764

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.62  E-value=5.9e-15  Score=123.97  Aligned_cols=195  Identities=15%  Similarity=0.105  Sum_probs=126.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|..+++.|+++|++|++++|+...   ..           ...+.++++|++|++++.++++..     ++|+
T Consensus        14 tGas~~iG~~la~~l~~~G~~v~~~~~~~~~---~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (252)
T PRK08220         14 TGAAQGIGYAVALAFVEAGAKVIGFDQAFLT---QE-----------DYPFATFVLDVSDAAAVAQVCQRLLAETGPLDV   79 (252)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEecchhh---hc-----------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999987611   00           246888999999999998887632     4899


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+++....                    +...+++++    .  +..++|++||........   -...|..+|...+
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~---~~~~Y~~sK~a~~  156 (252)
T PRK08220         80 LVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRI---GMAAYGASKAALT  156 (252)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCC---CCchhHHHHHHHH
Confidence            9999986321                    122233332    2  445899999965542211   1125888898887


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHH-HHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR-LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--  199 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~--  199 (314)
                      .+.+       .+++++++++|+.++++............. ...+....+ ........+++++|+|++++.++...  
T Consensus       157 ~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dva~~~~~l~~~~~~  235 (252)
T PRK08220        157 SLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQF-KLGIPLGKIARPQEIANAVLFLASDLAS  235 (252)
T ss_pred             HHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHH-hhcCCCcccCCHHHHHHHHHHHhcchhc
Confidence            7763       267999999999999884211100000000 000000000 01112245889999999999999753  


Q ss_pred             ccCCceEEecCCcc
Q 021331          200 KASRQVFNISGEKY  213 (314)
Q Consensus       200 ~~~~~~~~i~~~~~  213 (314)
                      ...++++.+.++..
T Consensus       236 ~~~g~~i~~~gg~~  249 (252)
T PRK08220        236 HITLQDIVVDGGAT  249 (252)
T ss_pred             CccCcEEEECCCee
Confidence            23677888877643

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.62  E-value=1.1e-14  Score=122.10  Aligned_cols=196  Identities=16%  Similarity=0.196  Sum_probs=127.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-----CCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-----~~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|.......... ....++......+.++.+|+.|++++..+++.     .++|+
T Consensus        12 tGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   90 (249)
T PRK12827         12 TGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEAD-AVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFGRLDI   90 (249)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999998875332111110 00011122235688999999999988887753     26899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhCC-------CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA--------------------DEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~~-------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      |||++|...                    .++..+++++.       +.+++|++||...+.....   ...|..+|...
T Consensus        91 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---~~~y~~sK~a~  167 (249)
T PRK12827         91 LVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRG---QVNYAASKAGL  167 (249)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCC---CchhHHHHHHH
Confidence            999998632                    11233443332       4568999999766533221   12588888776


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      +.+.+       ..+++++++||+.+.++........   ..+....+.         ..+.+.+|+|+++..++.... 
T Consensus       168 ~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~---~~~~~~~~~---------~~~~~~~~va~~~~~l~~~~~~  235 (249)
T PRK12827        168 IGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT---EHLLNPVPV---------QRLGEPDEVAALVAFLVSDAAS  235 (249)
T ss_pred             HHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH---HHHHhhCCC---------cCCcCHHHHHHHHHHHcCcccC
Confidence            66543       2489999999999999854332211   112211111         124578999999999886532 


Q ss_pred             -cCCceEEecCCc
Q 021331          201 -ASRQVFNISGEK  212 (314)
Q Consensus       201 -~~~~~~~i~~~~  212 (314)
                       ..|+.+++.++.
T Consensus       236 ~~~g~~~~~~~g~  248 (249)
T PRK12827        236 YVTGQVIPVDGGF  248 (249)
T ss_pred             CccCcEEEeCCCC
Confidence             257788887764

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.62  E-value=8.9e-15  Score=122.53  Aligned_cols=195  Identities=18%  Similarity=0.191  Sum_probs=126.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|+++.++.......+    ...+.+...++.++.+|+.|++++.+++++.     .+|+
T Consensus        12 tG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (247)
T PRK12935         12 TGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENL----VNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDI   87 (247)
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHH----HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999987655432211111    0111222346889999999999998888742     4899


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHhCC------CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------EVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |||+++....                    ++..+++++.      +..++|++||...+...   +....|..+|...+
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---~~~~~Y~~sK~a~~  164 (247)
T PRK12935         88 LVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG---FGQTNYSAAKAGML  164 (247)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC---CCCcchHHHHHHHH
Confidence            9999986321                    1223333321      34689999996443221   11226888998766


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-c
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-A  201 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-~  201 (314)
                      .+.+       ..++++++++|+.+.++.... ............         .....+.+++|++++++.++.... .
T Consensus       165 ~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~---------~~~~~~~~~edva~~~~~~~~~~~~~  234 (247)
T PRK12935        165 GFTKSLALELAKTNVTVNAICPGFIDTEMVAE-VPEEVRQKIVAK---------IPKKRFGQADEIAKGVVYLCRDGAYI  234 (247)
T ss_pred             HHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh-ccHHHHHHHHHh---------CCCCCCcCHHHHHHHHHHHcCcccCc
Confidence            6542       248999999999987753111 111111111111         112457899999999999887542 3


Q ss_pred             CCceEEecCCc
Q 021331          202 SRQVFNISGEK  212 (314)
Q Consensus       202 ~~~~~~i~~~~  212 (314)
                      .++.|++.++.
T Consensus       235 ~g~~~~i~~g~  245 (247)
T PRK12935        235 TGQQLNINGGL  245 (247)
T ss_pred             cCCEEEeCCCc
Confidence            68999998874

>PRK09186 flagellin modification protein A; Provisional

Probab=99.62  E-value=1.1e-14  Score=122.70  Aligned_cols=193  Identities=15%  Similarity=0.074  Sum_probs=126.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhh-h-ccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-E-FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......     .+. . ....+.++.+|+.|++++.++++..     .+
T Consensus        10 tGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~i   84 (256)
T PRK09186         10 TGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLE-----SLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKI   84 (256)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHH-----HHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Confidence            7999999999999999999999999988655321110     000 0 0134667799999999998888642     38


Q ss_pred             cEEEEcCCCCc---------------------------ccHHHHHHhCC--CCCcEEEEeeceeeccCC-----CCCc--
Q 021331           74 DVVYDINGREA---------------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSD-----LLPH--  117 (314)
Q Consensus        74 d~vi~~a~~~~---------------------------~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~-----~~~~--  117 (314)
                      |+|||+|+...                           ..++.++..+.  +.+++|++||...+....     ..+.  
T Consensus        85 d~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~  164 (256)
T PRK09186         85 DGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTS  164 (256)
T ss_pred             cEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccccCC
Confidence            99999986321                           01234555554  557999999965442211     1111  


Q ss_pred             cCccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHH
Q 021331          118 CESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  190 (314)
Q Consensus       118 ~e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  190 (314)
                      ...|+.+|...+.+.+       ..++++++++|+.++++..     ..+........+         ...+++.+|+|+
T Consensus       165 ~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~-----~~~~~~~~~~~~---------~~~~~~~~dva~  230 (256)
T PRK09186        165 PVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP-----EAFLNAYKKCCN---------GKGMLDPDDICG  230 (256)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-----HHHHHHHHhcCC---------ccCCCCHHHhhh
Confidence            1158999988777753       3579999999998876521     112222211110         124788999999


Q ss_pred             HHHHHhcCCc--cCCceEEecCCc
Q 021331          191 AFVQVLGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       191 ~~~~~l~~~~--~~~~~~~i~~~~  212 (314)
                      +++.++++..  ..|..+.+.++.
T Consensus       231 ~~~~l~~~~~~~~~g~~~~~~~g~  254 (256)
T PRK09186        231 TLVFLLSDQSKYITGQNIIVDDGF  254 (256)
T ss_pred             hHhheeccccccccCceEEecCCc
Confidence            9999997643  257788887764

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.62  E-value=2.2e-15  Score=132.42  Aligned_cols=225  Identities=16%  Similarity=0.210  Sum_probs=154.1

Q ss_pred             CCcccccHHHHHHHHHHCC---CeEEEEEcCCcccc--cCCCCC--------CchhhhhccCceEEEEecCCCh------
Q 021331            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIA--QQLPGE--------SDQEFAEFSSKILHLKGDRKDY------   61 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~--~~~~~~--------~~~~~~~~~~~~~~~~~D~~d~------   61 (314)
                      ||||||+|+-+++.|+..-   .+++.+-|.+....  ..+...        ..+...+...++..+.||+.++      
T Consensus        18 TG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~LGis~   97 (467)
T KOG1221|consen   18 TGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPDLGISE   97 (467)
T ss_pred             EcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCcccCCCh
Confidence            7999999999999999873   47888888765421  111000        0011111246788899999864      


Q ss_pred             hhHHHhhhcCCccEEEEcCCC-------------CcccHHHHHHhCC---CCCcEEEEeeceeeccCC---CCC------
Q 021331           62 DFVKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSD---LLP------  116 (314)
Q Consensus        62 ~~l~~~~~~~~~d~vi~~a~~-------------~~~~~~~~~~~~~---~~~~~i~~Ss~~v~~~~~---~~~------  116 (314)
                      .++..+.+  ++|+|||+|+.             |..+++++++.|+   +.+-++++||+++.-...   ..+      
T Consensus        98 ~D~~~l~~--eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~~~~~  175 (467)
T KOG1221|consen   98 SDLRTLAD--EVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPYPMPET  175 (467)
T ss_pred             HHHHHHHh--cCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccccCcccc
Confidence            45555666  99999999886             5677888888877   778899999987752110   000      


Q ss_pred             ----------------------------ccCccccchhhHHHHHHh--cCCceEEEecCeeeCCCCCCchhHH-------
Q 021331          117 ----------------------------HCESRHKGKLNTESVLES--KGVNWTSLRPVYIYGPLNYNPVEEW-------  159 (314)
Q Consensus       117 ----------------------------~~e~~~~~k~~~e~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~-------  159 (314)
                                                  +.+.|.-+|.++|..+.+  .++|++|+||+.|..... .++..|       
T Consensus       176 ~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~-EP~pGWidn~~gp  254 (467)
T KOG1221|consen  176 CNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYK-EPFPGWIDNLNGP  254 (467)
T ss_pred             CCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceecccc-CCCCCccccCCCC
Confidence                                        111788999999999964  469999999999988532 111111       


Q ss_pred             --HHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC--Cc---cCCceEEecCCc--cccHHHHHHHHHHHhC
Q 021331          160 --FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN--EK---ASRQVFNISGEK--YVTFDGLARACAKAAG  228 (314)
Q Consensus       160 --~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~--~~---~~~~~~~i~~~~--~~s~~el~~~i~~~~g  228 (314)
                        ++-....|..-.+..+.+...++|.++.++.+++.+.-.  ..   ....+||+++++  +++|.++.+.......
T Consensus       255 ~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~  332 (467)
T KOG1221|consen  255 DGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYFE  332 (467)
T ss_pred             ceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHhcc
Confidence              111112222223446677788999999999999877632  11   124599999985  5999999999999875

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.62  E-value=9.2e-15  Score=123.35  Aligned_cols=197  Identities=16%  Similarity=0.199  Sum_probs=129.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-----CCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-----~~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.++.....     ..+.....++.++.+|++|++++.+++++     .++|+
T Consensus        18 tGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~   92 (259)
T PRK08213         18 TGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAA-----AHLEALGIDALWIAADVADEADIERLAEETLERFGHVDI   92 (259)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999765422111     01111124678899999999988776653     25899


Q ss_pred             EEEcCCCC--------------------cccHHHHHHhC-----C--CCCcEEEEeeceeecc-CCCCCccCccccchhh
Q 021331           76 VYDINGRE--------------------ADEVEPILDAL-----P--NLEQFIYCSSAGVYLK-SDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~--------------------~~~~~~~~~~~-----~--~~~~~i~~Ss~~v~~~-~~~~~~~e~~~~~k~~  127 (314)
                      |||+++..                    ..++.++++++     .  +..+||++||...+.. ....+....|..+|..
T Consensus        93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~~sKa~  172 (259)
T PRK08213         93 LVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGA  172 (259)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHHHHHHH
Confidence            99999852                    11233444433     1  4568999999655432 2221222368999998


Q ss_pred             HHHHHHh-------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          128 TESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       128 ~e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.+++.       +++++.+++|+.+-.+... .....+........+..         .+...+|+++++..++....
T Consensus       173 ~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~~va~~~~~l~~~~~  242 (259)
T PRK08213        173 VINFTRALAAEWGPHGIRVNAIAPGFFPTKMTR-GTLERLGEDLLAHTPLG---------RLGDDEDLKGAALLLASDAS  242 (259)
T ss_pred             HHHHHHHHHHHhcccCEEEEEEecCcCCCcchh-hhhHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhCccc
Confidence            8887642       4789999999988665321 12333333333332221         23357999999998887532


Q ss_pred             --cCCceEEecCCc
Q 021331          201 --ASRQVFNISGEK  212 (314)
Q Consensus       201 --~~~~~~~i~~~~  212 (314)
                        ..|..+++.++.
T Consensus       243 ~~~~G~~~~~~~~~  256 (259)
T PRK08213        243 KHITGQILAVDGGV  256 (259)
T ss_pred             cCccCCEEEECCCe
Confidence              367888887763

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.61  E-value=7.7e-15  Score=121.23  Aligned_cols=182  Identities=16%  Similarity=0.149  Sum_probs=122.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-CccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi~~   79 (314)
                      |||+|++|.++++.|+++ ++|++++|+.......         .....++.++++|+.|++++.++++.. ++|+|||+
T Consensus         9 tG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   78 (227)
T PRK08219          9 TGASRGIGAAIARELAPT-HTLLLGGRPAERLDEL---------AAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN   78 (227)
T ss_pred             ecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHH---------HHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            799999999999999999 9999999986542211         111235788999999999999988744 59999999


Q ss_pred             CCCCcc--------------------c----HHHHHHhCC-CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHh
Q 021331           80 NGREAD--------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLES  134 (314)
Q Consensus        80 a~~~~~--------------------~----~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~  134 (314)
                      ++....                    +    ++++++.+. ..+++|++||...++....   ...|..+|...+.+++.
T Consensus        79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~---~~~y~~~K~a~~~~~~~  155 (227)
T PRK08219         79 AGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANPG---WGSYAASKFALRALADA  155 (227)
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCCC---CchHHHHHHHHHHHHHH
Confidence            986321                    0    334444444 4578999999776643322   22588888887766532


Q ss_pred             -----cC-CceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEe
Q 021331          135 -----KG-VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI  208 (314)
Q Consensus       135 -----~~-~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i  208 (314)
                           .+ +++..++|+.+.++.     ...+..  ..+..  .     ....+++++|++++++.+++++. .+.++++
T Consensus       156 ~~~~~~~~i~~~~i~pg~~~~~~-----~~~~~~--~~~~~--~-----~~~~~~~~~dva~~~~~~l~~~~-~~~~~~~  220 (227)
T PRK08219        156 LREEEPGNVRVTSVHPGRTDTDM-----QRGLVA--QEGGE--Y-----DPERYLRPETVAKAVRFAVDAPP-DAHITEV  220 (227)
T ss_pred             HHHHhcCCceEEEEecCCccchH-----hhhhhh--hhccc--c-----CCCCCCCHHHHHHHHHHHHcCCC-CCccceE
Confidence                 23 788888887665541     111110  00111  1     12457999999999999998764 4566666


Q ss_pred             cC
Q 021331          209 SG  210 (314)
Q Consensus       209 ~~  210 (314)
                      .-
T Consensus       221 ~~  222 (227)
T PRK08219        221 VV  222 (227)
T ss_pred             EE
Confidence            53

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.61  E-value=4e-14  Score=117.57  Aligned_cols=183  Identities=21%  Similarity=0.231  Sum_probs=124.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc----CCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~----~~~d~v   76 (314)
                      |||+|++|.+++++|+++|++|++++|+....                ....++.+|+.|++++.+++.+    .++|++
T Consensus         9 tG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~v   72 (234)
T PRK07577          9 TGATKGIGLALSLRLANLGHQVIGIARSAIDD----------------FPGELFACDLADIEQTAATLAQINEIHPVDAI   72 (234)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----------------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEE
Confidence            79999999999999999999999999986541                1125788999999887776653    368999


Q ss_pred             EEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           77 YDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        77 i~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      ||+++....                    +    .+.++..+.  +..++|++||...++....    ..|..+|...+.
T Consensus        73 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~Y~~sK~a~~~  148 (234)
T PRK07577         73 VNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALDR----TSYSAAKSALVG  148 (234)
T ss_pred             EECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCCc----hHHHHHHHHHHH
Confidence            999986321                    1    223344443  5579999999877654332    258888888776


Q ss_pred             HHH-------hcCCceEEEecCeeeCCCCCC--chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          131 VLE-------SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       131 ~~~-------~~~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      +.+       ..+++++++||+.+..+....  +.............+         ...+...+|+|.+++.++..+. 
T Consensus       149 ~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~a~~~~~l~~~~~~  219 (234)
T PRK07577        149 CTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIP---------MRRLGTPEEVAAAIAFLLSDDAG  219 (234)
T ss_pred             HHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCC---------CCCCcCHHHHHHHHHHHhCcccC
Confidence            653       358999999999988764211  111111111111111         1124467999999999997643 


Q ss_pred             -cCCceEEecCCc
Q 021331          201 -ASRQVFNISGEK  212 (314)
Q Consensus       201 -~~~~~~~i~~~~  212 (314)
                       ..|+.+.+.++.
T Consensus       220 ~~~g~~~~~~g~~  232 (234)
T PRK07577        220 FITGQVLGVDGGG  232 (234)
T ss_pred             CccceEEEecCCc
Confidence             357888887764

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.61  E-value=8.6e-15  Score=122.55  Aligned_cols=194  Identities=19%  Similarity=0.241  Sum_probs=122.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEE-EcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|+++ .|+.+......     ..+.....++.++.+|+.|++++.++++..     ++|
T Consensus         7 tGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          7 TGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVV-----NLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH-----HHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            7999999999999999999999875 45433211111     111222346888999999999998887632     578


Q ss_pred             EEEEcCCCCcc---------------------cH----HHHHHhCC-----CCCcEEEEeeceee-ccCCCCCccCcccc
Q 021331           75 VVYDINGREAD---------------------EV----EPILDALP-----NLEQFIYCSSAGVY-LKSDLLPHCESRHK  123 (314)
Q Consensus        75 ~vi~~a~~~~~---------------------~~----~~~~~~~~-----~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~  123 (314)
                      +|||+++....                     ++    +.++..+.     ...+||++||...+ +....   ...|+.
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~---~~~Y~~  158 (247)
T PRK09730         82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGE---YVDYAA  158 (247)
T ss_pred             EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCc---ccchHh
Confidence            99999986311                     01    11122111     23569999996543 32211   125888


Q ss_pred             chhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          124 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       124 ~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      +|...+.+++       ..+++++++||+.+|+|..................++.         ...+.+|+|++++.++
T Consensus       159 sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~dva~~~~~~~  229 (247)
T PRK09730        159 SKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQ---------RGGQPEEVAQAIVWLL  229 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHhhc
Confidence            8988776653       35899999999999998532221122222222222211         1236899999999988


Q ss_pred             cCCc--cCCceEEecCC
Q 021331          197 GNEK--ASRQVFNISGE  211 (314)
Q Consensus       197 ~~~~--~~~~~~~i~~~  211 (314)
                      ....  ..|+.+.+.++
T Consensus       230 ~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        230 SDKASYVTGSFIDLAGG  246 (247)
T ss_pred             ChhhcCccCcEEecCCC
Confidence            7532  35677777664

>PRK08324 short chain dehydrogenase; Validated

Probab=99.61  E-value=3.7e-15  Score=141.73  Aligned_cols=204  Identities=15%  Similarity=0.130  Sum_probs=134.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|++.|++|++++|+.+.......     .+... .++.++.+|++|++++.++++..     ++|+
T Consensus       428 TGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~-----~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDv  501 (681)
T PRK08324        428 TGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAA-----ELGGP-DRALGVACDVTDEAAVQAAFEEAALAFGGVDI  501 (681)
T ss_pred             ecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHH-----HHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998755321110     01000 36889999999999888877642     6899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHh----CC--C-CCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      |||++|...                    .+...++++    +.  + ..+||++||...+...   +....|+.+|...
T Consensus       502 vI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~---~~~~~Y~asKaa~  578 (681)
T PRK08324        502 VVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG---PNFGAYGAAKAAE  578 (681)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC---CCcHHHHHHHHHH
Confidence            999998532                    123334333    33  2 3689999996654322   1122689999988


Q ss_pred             HHHHHh-------cCCceEEEecCeee-CCCCCCchhHHHHHHHHcCCCe----ecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          129 ESVLES-------KGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLKAGRPI----PIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       129 e~~~~~-------~~~~~~ilR~~~v~-g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      +.+++.       .++++++++|+.+| +++........ ......+...    ..+..+.....+++++|+|++++.++
T Consensus       579 ~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~  657 (681)
T PRK08324        579 LHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIE-ARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLA  657 (681)
T ss_pred             HHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhh-hhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHh
Confidence            887643       46999999999998 65422211100 0000111110    12234455667999999999999998


Q ss_pred             c--CCccCCceEEecCCccc
Q 021331          197 G--NEKASRQVFNISGEKYV  214 (314)
Q Consensus       197 ~--~~~~~~~~~~i~~~~~~  214 (314)
                      .  .....|.++++.++...
T Consensus       658 s~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        658 SGLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             CccccCCcCCEEEECCCchh
Confidence            5  33446889999988643

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.61  E-value=2.7e-15  Score=126.55  Aligned_cols=195  Identities=18%  Similarity=0.209  Sum_probs=128.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.+++++|+++|++|++++|+.+.. ...     ..+.....++.++.+|+++++++..++++.     ++|+
T Consensus        13 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (258)
T PRK08628         13 TGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFA-----EELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDG   86 (258)
T ss_pred             eCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            79999999999999999999999999887542 111     112222356889999999999888877642     6899


Q ss_pred             EEEcCCCCcc-------------------cHHHHHHh----CC-CCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           76 VYDINGREAD-------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        76 vi~~a~~~~~-------------------~~~~~~~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      |||++|....                   +..++.+.    +. ...+||++||...+...   +....|+.+|...+.+
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~---~~~~~Y~~sK~a~~~~  163 (258)
T PRK08628         87 LVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQ---GGTSGYAAAKGAQLAL  163 (258)
T ss_pred             EEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCC---CCCchhHHHHHHHHHH
Confidence            9999985321                   11122222    23 34689999996554322   1223689999888877


Q ss_pred             HH-------hcCCceEEEecCeeeCCCCCCch-----hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          132 LE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       132 ~~-------~~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      ++       ..+++++.++|+.++++.....+     .......+...  .+.   +   ..++..+|+|++++.++...
T Consensus       164 ~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~---~---~~~~~~~dva~~~~~l~~~~  235 (258)
T PRK08628        164 TREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAK--IPL---G---HRMTTAEEIADTAVFLLSER  235 (258)
T ss_pred             HHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhc--CCc---c---ccCCCHHHHHHHHHHHhChh
Confidence            64       24799999999999987321100     00000111110  111   0   24678899999999999764


Q ss_pred             --ccCCceEEecCCc
Q 021331          200 --KASRQVFNISGEK  212 (314)
Q Consensus       200 --~~~~~~~~i~~~~  212 (314)
                        ...|..+.+.++.
T Consensus       236 ~~~~~g~~~~~~gg~  250 (258)
T PRK08628        236 SSHTTGQWLFVDGGY  250 (258)
T ss_pred             hccccCceEEecCCc
Confidence              2357788887765

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.61  E-value=2.3e-14  Score=119.89  Aligned_cols=195  Identities=21%  Similarity=0.279  Sum_probs=126.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||+++++.|.++|++|+++.|+.......+.    +.+.....++.++.+|++|++++.++++..     ++|+
T Consensus        11 tG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (245)
T PRK12937         11 TGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELV----AEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRIDV   86 (245)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHH----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999888776543211110    111222356889999999999888887642     6899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhC----CCCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           76 VYDINGREA--------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      |||++|...                    .+...+++++    ....++|++||...+...   |....|+.+|...+.+
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~---~~~~~Y~~sK~a~~~~  163 (245)
T PRK12937         87 LVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPL---PGYGPYAASKAAVEGL  163 (245)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCC---CCCchhHHHHHHHHHH
Confidence            999998631                    1122333332    233589999986554322   2223688999888877


Q ss_pred             HHh-------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cC
Q 021331          132 LES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--AS  202 (314)
Q Consensus       132 ~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~  202 (314)
                      ++.       .++.+++++|+.+-.+.............+....++         ..+.+.+|++++++.++..+.  ..
T Consensus       164 ~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~d~a~~~~~l~~~~~~~~~  234 (245)
T PRK12937        164 VHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPL---------ERLGTPEEIAAAVAFLAGPDGAWVN  234 (245)
T ss_pred             HHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcCccccCcc
Confidence            642       478899999998876532111112223333222221         134567999999999987643  25


Q ss_pred             CceEEecCC
Q 021331          203 RQVFNISGE  211 (314)
Q Consensus       203 ~~~~~i~~~  211 (314)
                      |+++++.++
T Consensus       235 g~~~~~~~g  243 (245)
T PRK12937        235 GQVLRVNGG  243 (245)
T ss_pred             ccEEEeCCC
Confidence            788888765

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.60  E-value=1.2e-14  Score=123.83  Aligned_cols=136  Identities=15%  Similarity=0.211  Sum_probs=102.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC------Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~------~~d   74 (314)
                      |||+|++|.++++.|.++|++|++++|+.+.... +.          ..++.++.+|++|++++.++++..      .+|
T Consensus        10 tGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~-l~----------~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id   78 (277)
T PRK05993         10 TGCSSGIGAYCARALQSDGWRVFATCRKEEDVAA-LE----------AEGLEAFQLDYAEPESIAALVAQVLELSGGRLD   78 (277)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH----------HCCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence            7999999999999999999999999998765321 11          135788999999998888777642      589


Q ss_pred             EEEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      ++||+||....                    +    ++.+++.+.  +..++|++||...+..   .+....|+.+|...
T Consensus        79 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~---~~~~~~Y~asK~a~  155 (277)
T PRK05993         79 ALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVP---MKYRGAYNASKFAI  155 (277)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCC---CCccchHHHHHHHH
Confidence            99999885321                    1    445666665  5679999999655432   22223699999998


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCC
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGP  150 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~  150 (314)
                      +.+.+       .+|+++++++||.+-.+
T Consensus       156 ~~~~~~l~~el~~~gi~v~~v~Pg~v~T~  184 (277)
T PRK05993        156 EGLSLTLRMELQGSGIHVSLIEPGPIETR  184 (277)
T ss_pred             HHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence            88753       46899999999988765

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.60  E-value=8.9e-15  Score=123.71  Aligned_cols=182  Identities=19%  Similarity=0.234  Sum_probs=121.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|.++++.|+++|++|++++|+..+.....     ..+.....++.++.+|+.|++.+..+++..     ++|+
T Consensus         7 tGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   81 (263)
T PRK06181          7 TGASEGIGRALAVRLARAGAQLVLAARNETRLASLA-----QELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI   81 (263)
T ss_pred             ecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111     111112356888999999999888877643     6899


Q ss_pred             EEEcCCCCcc---------------------cHHHHHHhC----C-CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD---------------------EVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~---------------------~~~~~~~~~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |||+++....                     ++.++++.+    . +..++|++||...+....   ....|+.+|...+
T Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~---~~~~Y~~sK~~~~  158 (263)
T PRK06181         82 LVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVP---TRSGYAASKHALH  158 (263)
T ss_pred             EEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCC---CccHHHHHHHHHH
Confidence            9999986221                     122333443    2 456899999977664322   2236899998887


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      .+.+       ..++++++++|+.+..+....     ...  ..+.+..  ..+.....+++++|+|++++.++...
T Consensus       159 ~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~-----~~~--~~~~~~~--~~~~~~~~~~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        159 GFFDSLRIELADDGVAVTVVCPGFVATDIRKR-----ALD--GDGKPLG--KSPMQESKIMSAEECAEAILPAIARR  226 (263)
T ss_pred             HHHHHHHHHhhhcCceEEEEecCccccCcchh-----hcc--ccccccc--cccccccCCCCHHHHHHHHHHHhhCC
Confidence            7763       357999999999887763211     000  0111111  11122237899999999999999853

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.60  E-value=2.3e-14  Score=119.29  Aligned_cols=193  Identities=21%  Similarity=0.270  Sum_probs=125.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      ||++|++|.++++.|+++|++|++++|+.........    ..+.+....+.++.+|++|++++.++++..     .+|+
T Consensus         4 tG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (239)
T TIGR01830         4 TGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVV----EELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI   79 (239)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999987632111110    112222345789999999999888887632     5799


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHhCC------CCCcEEEEeec-eeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREAD--------------------EVEPILDALP------NLEQFIYCSSA-GVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~~~------~~~~~i~~Ss~-~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      |||++|....                    ++.++++++.      +.++|+++||. +.++...    ...|..+|...
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~----~~~y~~~k~a~  155 (239)
T TIGR01830        80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAG----QANYAASKAGV  155 (239)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC----CchhHHHHHHH
Confidence            9999986321                    1233444432      45689999995 4454332    22588888766


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC--
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--  199 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~--  199 (314)
                      +.+.+       ..++.+++++|+.+.++... .....+........+.         ..+.+++|++++++.++..+  
T Consensus       156 ~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~~~~~~~~  225 (239)
T TIGR01830       156 IGFTKSLAKELASRNITVNAVAPGFIDTDMTD-KLSEKVKKKILSQIPL---------GRFGTPEEVANAVAFLASDEAS  225 (239)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEEECCCCChhhh-hcChHHHHHHHhcCCc---------CCCcCHHHHHHHHHHHhCcccC
Confidence            65542       35899999999987665211 1112222222222111         12557899999999888553  


Q ss_pred             ccCCceEEecCC
Q 021331          200 KASRQVFNISGE  211 (314)
Q Consensus       200 ~~~~~~~~i~~~  211 (314)
                      ...+++|++.++
T Consensus       226 ~~~g~~~~~~~g  237 (239)
T TIGR01830       226 YITGQVIHVDGG  237 (239)
T ss_pred             CcCCCEEEeCCC
Confidence            236789999765

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.59  E-value=4.2e-14  Score=119.39  Aligned_cols=191  Identities=17%  Similarity=0.192  Sum_probs=127.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|.++|++|++++|+....   .           ..++.++.+|+.|++++.++++..     ++|+
T Consensus        15 tGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   80 (260)
T PRK06523         15 TGGTKGIGAATVARLLEAGARVVTTARSRPDD---L-----------PEGVEFVAADLTTAEGCAAVARAVLERLGGVDI   80 (260)
T ss_pred             ECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---c-----------CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986541   1           146788999999998877665432     5899


Q ss_pred             EEEcCCCCc----------------------ccH----HHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           76 VYDINGREA----------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~~----------------------~~~----~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      |||++|...                      .+.    +.++..+.  +..++|++||...+....  +....|+.+|..
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~--~~~~~Y~~sK~a  158 (260)
T PRK06523         81 LVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLP--ESTTAYAAAKAA  158 (260)
T ss_pred             EEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCC--CCcchhHHHHHH
Confidence            999998421                      111    22333333  346899999976653311  112368889988


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHH-----------HHHHHcC-CCeecCCCCCceeeeeeHHHH
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWF-----------FHRLKAG-RPIPIPGSGIQVTQLGHVKDL  188 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~-----------~~~~~~~-~~~~~~~~~~~~~~~i~~~D~  188 (314)
                      .+.+.+       ..++++.+++|+.+.++.... +...+           ...+... ...+       ...+...+|+
T Consensus       159 ~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~~v  230 (260)
T PRK06523        159 LSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVA-LAERLAEAAGTDYEGAKQIIMDSLGGIP-------LGRPAEPEEV  230 (260)
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEecCcccCccHHH-HHHHHHhhcCCCHHHHHHHHHHHhccCc-------cCCCCCHHHH
Confidence            877653       257999999999998874211 11100           0000000 0011       1235578999


Q ss_pred             HHHHHHHhcCC--ccCCceEEecCCcccc
Q 021331          189 ARAFVQVLGNE--KASRQVFNISGEKYVT  215 (314)
Q Consensus       189 a~~~~~~l~~~--~~~~~~~~i~~~~~~s  215 (314)
                      |++++.++.+.  ...|..+.+.++...|
T Consensus       231 a~~~~~l~s~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        231 AELIAFLASDRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             HHHHHHHhCcccccccCceEEecCCccCC
Confidence            99999999763  2367899999887554

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.59  E-value=2.8e-14  Score=120.11  Aligned_cols=192  Identities=15%  Similarity=0.147  Sum_probs=127.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+..... ...     .+.  ...+..+.+|+++++++..++++.     ++|+
T Consensus        21 tGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~-~~~-----~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         21 TGGASGIGHAIAELFAAKGARVALLDRSEDVAE-VAA-----QLL--GGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH-----Hhh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            699999999999999999999999999765311 000     000  135678999999999888877642     6899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhC----C--CCCcEEEEeecee-eccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGV-YLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~----~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||++|...                    .+..++++++    .  +..+||++||... ++...    ...|+.+|...
T Consensus        93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~Y~~sK~a~  168 (255)
T PRK06841         93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALER----HVAYCASKAGV  168 (255)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCC----CchHHHHHHHH
Confidence            999998632                    1222333332    2  4568999999654 33222    23688888877


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      +.+.+       ..++.+..++|+.+..+.................  .       ....+.+.+|+|++++.++..+. 
T Consensus       169 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~va~~~~~l~~~~~~  239 (255)
T PRK06841        169 VGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKL--I-------PAGRFAYPEEIAAAALFLASDAAA  239 (255)
T ss_pred             HHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhc--C-------CCCCCcCHHHHHHHHHHHcCcccc
Confidence            66653       2579999999999877632211111111111111  1       11347789999999999997643 


Q ss_pred             -cCCceEEecCCcc
Q 021331          201 -ASRQVFNISGEKY  213 (314)
Q Consensus       201 -~~~~~~~i~~~~~  213 (314)
                       ..|.++.+.++..
T Consensus       240 ~~~G~~i~~dgg~~  253 (255)
T PRK06841        240 MITGENLVIDGGYT  253 (255)
T ss_pred             CccCCEEEECCCcc
Confidence             2678889988753

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.59  E-value=5.8e-14  Score=119.20  Aligned_cols=187  Identities=18%  Similarity=0.133  Sum_probs=122.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.+++++|+++|++|++++|+......             ..++.++.+|++|++++.++++..     .+|+
T Consensus        10 tGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-------------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~   76 (270)
T PRK06179         10 TGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-------------IPGVELLELDVTDDASVQAAVDEVIARAGRIDV   76 (270)
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-------------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence            7999999999999999999999999998654221             146889999999999998888742     5899


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||++|....                    ++..++++    +.  +.+++|++||...+..   .|....|+.+|...+
T Consensus        77 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---~~~~~~Y~~sK~a~~  153 (270)
T PRK06179         77 LVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLP---APYMALYAASKHAVE  153 (270)
T ss_pred             EEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCC---CCCccHHHHHHHHHH
Confidence            9999986321                    12223333    43  5679999999765532   233336889998887


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCc-----hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNP-----VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      .+.+       .+++++++++|+.+.++.....     ..... ....... ....  ..........+|+|+.++.++.
T Consensus       154 ~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~-~~~~~~~-~~~~--~~~~~~~~~~~~va~~~~~~~~  229 (270)
T PRK06179        154 GYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEY-DRERAVV-SKAV--AKAVKKADAPEVVADTVVKAAL  229 (270)
T ss_pred             HHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhh-HHHHHHH-HHHH--HhccccCCCHHHHHHHHHHHHc
Confidence            7653       3689999999999988642111     00000 0000000 0000  0011224567999999999998


Q ss_pred             CCccCCceEEe
Q 021331          198 NEKASRQVFNI  208 (314)
Q Consensus       198 ~~~~~~~~~~i  208 (314)
                      .+. .+..|..
T Consensus       230 ~~~-~~~~~~~  239 (270)
T PRK06179        230 GPW-PKMRYTA  239 (270)
T ss_pred             CCC-CCeeEec
Confidence            654 2344544

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.59  E-value=2.8e-14  Score=118.22  Aligned_cols=196  Identities=18%  Similarity=0.185  Sum_probs=129.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-CccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi~~   79 (314)
                      |||+|++|.++++.|+++|++|++++|+.+.......     .+. ...++.++.+|++|++++.++++.. .+|++||+
T Consensus         3 tGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~   76 (230)
T PRK07041          3 VGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAAR-----ALG-GGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT   76 (230)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHh-cCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence            7999999999999999999999999998644221110     010 0246889999999999999998754 37999999


Q ss_pred             CCCCcc--------------------cHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhc--
Q 021331           80 NGREAD--------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESK--  135 (314)
Q Consensus        80 a~~~~~--------------------~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~--  135 (314)
                      ++....                    +...+.++..  +..++|++||...+....   ....|..+|...+.+.+..  
T Consensus        77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~---~~~~Y~~sK~a~~~~~~~la~  153 (230)
T PRK07041         77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSA---SGVLQGAINAALEALARGLAL  153 (230)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCC---cchHHHHHHHHHHHHHHHHHH
Confidence            986321                    1223333322  557899999987764322   2225889998888877532  


Q ss_pred             ---CCceEEEecCeeeCCCCCC---chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEec
Q 021331          136 ---GVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS  209 (314)
Q Consensus       136 ---~~~~~ilR~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~  209 (314)
                         +++++.++|+.+-.+....   .....+........+  .       ..+...+|+|++++.++..+...|..|++.
T Consensus       154 e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~dva~~~~~l~~~~~~~G~~~~v~  224 (230)
T PRK07041        154 ELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLP--A-------RRVGQPEDVANAILFLAANGFTTGSTVLVD  224 (230)
T ss_pred             HhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCC--C-------CCCcCHHHHHHHHHHHhcCCCcCCcEEEeC
Confidence               4678888888775542100   000111111111111  1       123467999999999998765568899999


Q ss_pred             CCccc
Q 021331          210 GEKYV  214 (314)
Q Consensus       210 ~~~~~  214 (314)
                      ++.++
T Consensus       225 gg~~~  229 (230)
T PRK07041        225 GGHAI  229 (230)
T ss_pred             CCeec
Confidence            88653

>PLN02253 xanthoxin dehydrogenase

Probab=99.58  E-value=1.1e-14  Score=124.37  Aligned_cols=201  Identities=16%  Similarity=0.110  Sum_probs=127.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.+++++|+++|++|++++|+.........     .+. ...++.++.+|++|++++.++++..     ++|+
T Consensus        24 tGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~   97 (280)
T PLN02253         24 TGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCD-----SLG-GEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDI   97 (280)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----Hhc-CCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999987543211110     010 0246889999999999888877632     5899


Q ss_pred             EEEcCCCCcc----------------------cHHHHHHhC----C--CCCcEEEEeecee-eccCCCCCccCccccchh
Q 021331           76 VYDINGREAD----------------------EVEPILDAL----P--NLEQFIYCSSAGV-YLKSDLLPHCESRHKGKL  126 (314)
Q Consensus        76 vi~~a~~~~~----------------------~~~~~~~~~----~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~k~  126 (314)
                      +||+||....                      ++.++++++    .  +..++|++||... ++...    ...|+.+|.
T Consensus        98 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~----~~~Y~~sK~  173 (280)
T PLN02253         98 MVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLG----PHAYTGSKH  173 (280)
T ss_pred             EEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCC----CcccHHHHH
Confidence            9999986311                      122233322    1  3357888887443 43322    226899999


Q ss_pred             hHHHHHHh-------cCCceEEEecCeeeCCCCCCch-----hHHHHHHHHc--CCCeecCCCCCceeeeeeHHHHHHHH
Q 021331          127 NTESVLES-------KGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKA--GRPIPIPGSGIQVTQLGHVKDLARAF  192 (314)
Q Consensus       127 ~~e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~D~a~~~  192 (314)
                      ..+.+.+.       .++++..++|+.+.++......     ....+.....  ....++      ....++++|+|+++
T Consensus       174 a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~~~dva~~~  247 (280)
T PLN02253        174 AVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANL------KGVELTVDDVANAV  247 (280)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCC------cCCCCCHHHHHHHH
Confidence            88887642       4799999999998776321100     0011100000  000000      12246799999999


Q ss_pred             HHHhcCCc--cCCceEEecCCccccHH
Q 021331          193 VQVLGNEK--ASRQVFNISGEKYVTFD  217 (314)
Q Consensus       193 ~~~l~~~~--~~~~~~~i~~~~~~s~~  217 (314)
                      +.++....  ..|..+++.++...+..
T Consensus       248 ~~l~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
T PLN02253        248 LFLASDEARYISGLNLMIDGGFTCTNH  274 (280)
T ss_pred             HhhcCcccccccCcEEEECCchhhccc
Confidence            99987532  26788999888654433

>PRK08643 acetoin reductase; Validated

Probab=99.58  E-value=4.9e-14  Score=118.72  Aligned_cols=199  Identities=17%  Similarity=0.246  Sum_probs=126.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.+++++.     ++|+
T Consensus         8 tGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (256)
T PRK08643          8 TGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAA-----DKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNV   82 (256)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111     111112346788999999999888877642     5899


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC---CCCcEEEEeeceee-ccCCCCCccCccccchhh
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP---NLEQFIYCSSAGVY-LKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~---~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~k~~  127 (314)
                      +||++|....                    +    ++.+++.+.   ...++|++||...+ +...    ...|+.+|..
T Consensus        83 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~Y~~sK~a  158 (256)
T PRK08643         83 VVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPE----LAVYSSTKFA  158 (256)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCC----CchhHHHHHH
Confidence            9999986321                    1    122333332   23589999986543 3222    2258888988


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHc--CCCeec----CCCCCceeeeeeHHHHHHHHHH
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GRPIPI----PGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                      .+.+.+       ..|++++.++|+.+.++..     ..+......  +.+...    +-.......+...+|+|.++..
T Consensus       159 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (256)
T PRK08643        159 VRGLTQTAARDLASEGITVNAYAPGIVKTPMM-----FDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSF  233 (256)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEeeCCCcChhh-----hHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence            776653       3579999999999887631     111111100  000000    0000011235678999999999


Q ss_pred             HhcCC--ccCCceEEecCCcc
Q 021331          195 VLGNE--KASRQVFNISGEKY  213 (314)
Q Consensus       195 ~l~~~--~~~~~~~~i~~~~~  213 (314)
                      ++...  ...|.++.+.++..
T Consensus       234 L~~~~~~~~~G~~i~vdgg~~  254 (256)
T PRK08643        234 LAGPDSDYITGQTIIVDGGMV  254 (256)
T ss_pred             HhCccccCccCcEEEeCCCee
Confidence            99753  24778888887753

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.58  E-value=5.1e-14  Score=118.27  Aligned_cols=193  Identities=15%  Similarity=0.222  Sum_probs=130.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||..+++.|+++|++|++++|+........     ..+.+...++.++.+|+.+++++.++++..     .+|+
T Consensus        11 tG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (253)
T PRK08217         11 TGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAV-----AECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNG   85 (253)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999998865422111     111222356788999999998887777642     4799


Q ss_pred             EEEcCCCCcc-----------------------------cH----HHHHHhCC---CCCcEEEEeeceeeccCCCCCccC
Q 021331           76 VYDINGREAD-----------------------------EV----EPILDALP---NLEQFIYCSSAGVYLKSDLLPHCE  119 (314)
Q Consensus        76 vi~~a~~~~~-----------------------------~~----~~~~~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e  119 (314)
                      |||++|....                             +.    +.++..+.   ...++|++||...++....    .
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~----~  161 (253)
T PRK08217         86 LINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMGQ----T  161 (253)
T ss_pred             EEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCCCC----c
Confidence            9999984210                             00    11222221   2246899999877754332    2


Q ss_pred             ccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHH
Q 021331          120 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  192 (314)
Q Consensus       120 ~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  192 (314)
                      .|..+|...+.+++       ..+++++.++|+.+.++.... ..+..........+.         ..+.+.+|+|+++
T Consensus       162 ~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~  231 (253)
T PRK08217        162 NYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA-MKPEALERLEKMIPV---------GRLGEPEEIAHTV  231 (253)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc-cCHHHHHHHHhcCCc---------CCCcCHHHHHHHH
Confidence            58888988777653       357999999999998874322 223333333322221         2356789999999


Q ss_pred             HHHhcCCccCCceEEecCCc
Q 021331          193 VQVLGNEKASRQVFNISGEK  212 (314)
Q Consensus       193 ~~~l~~~~~~~~~~~i~~~~  212 (314)
                      ..++......|+++++.++.
T Consensus       232 ~~l~~~~~~~g~~~~~~gg~  251 (253)
T PRK08217        232 RFIIENDYVTGRVLEIDGGL  251 (253)
T ss_pred             HHHHcCCCcCCcEEEeCCCc
Confidence            99997654578899998875

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.58  E-value=5.9e-14  Score=117.32  Aligned_cols=197  Identities=18%  Similarity=0.232  Sum_probs=129.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|.++++.|.++|++|++++|+.........    ........++.++.+|+.|++++.++++..     ++|+
T Consensus         8 tG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~   83 (245)
T PRK12824          8 TGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWF----EEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVDI   83 (245)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHH----HHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999988532110000    000011246889999999999888877632     5899


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||++|....                    +    ++.+++.+.  +..+||++||...+...   +....|..+|...+
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~---~~~~~Y~~sK~a~~  160 (245)
T PRK12824         84 LVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQ---FGQTNYSAAKAGMI  160 (245)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCC---CCChHHHHHHHHHH
Confidence            9999985321                    1    222344443  56799999997665432   22236888898766


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+++       ..++++++++|+.+.++.... .............+         ...+...+|+++++..++....  
T Consensus       161 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~~~~~  230 (245)
T PRK12824        161 GFTKALASEGARYGITVNCIAPGYIATPMVEQ-MGPEVLQSIVNQIP---------MKRLGTPEEIAAAVAFLVSEAAGF  230 (245)
T ss_pred             HHHHHHHHHHHHhCeEEEEEEEcccCCcchhh-cCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHcCccccC
Confidence            6543       347999999999998773221 11222222222221         1235568999999998886532  


Q ss_pred             cCCceEEecCCccc
Q 021331          201 ASRQVFNISGEKYV  214 (314)
Q Consensus       201 ~~~~~~~i~~~~~~  214 (314)
                      ..|+.+++.++..+
T Consensus       231 ~~G~~~~~~~g~~~  244 (245)
T PRK12824        231 ITGETISINGGLYM  244 (245)
T ss_pred             ccCcEEEECCCeec
Confidence            36899999988654

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.57  E-value=8.2e-14  Score=117.20  Aligned_cols=198  Identities=14%  Similarity=0.181  Sum_probs=127.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|.++|++|++++|+.+.....+.    ..+.....++.++.+|+.|++++.++++..     ++|+
T Consensus        14 tG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~----~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   89 (254)
T PRK06114         14 TGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETA----EHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALTL   89 (254)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999987643111110    112222346788999999999888877632     4799


Q ss_pred             EEEcCCCCc--------------------ccH----HHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~----~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||++|...                    .+.    +.++..+.  +..++|++||...+...... ....|..+|...+
T Consensus        90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-~~~~Y~~sKaa~~  168 (254)
T PRK06114         90 AVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGL-LQAHYNASKAGVI  168 (254)
T ss_pred             EEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCC-CcchHHHHHHHHH
Confidence            999998631                    111    22333343  45689999986543222111 1226888898776


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       .+++++.+++||.+.++....+.............+  +       ..+..++|++.+++.++.+..  
T Consensus       169 ~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p--~-------~r~~~~~dva~~~~~l~s~~~~~  239 (254)
T PRK06114        169 HLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTP--M-------QRMAKVDEMVGPAVFLLSDAASF  239 (254)
T ss_pred             HHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCC--C-------CCCcCHHHHHHHHHHHcCccccC
Confidence            6653       357999999999998874321111111111111111  1       235668999999999987532  


Q ss_pred             cCCceEEecCCc
Q 021331          201 ASRQVFNISGEK  212 (314)
Q Consensus       201 ~~~~~~~i~~~~  212 (314)
                      ..|.++.+.++.
T Consensus       240 ~tG~~i~~dgg~  251 (254)
T PRK06114        240 CTGVDLLVDGGF  251 (254)
T ss_pred             cCCceEEECcCE
Confidence            367888888764

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.57  E-value=7.9e-14  Score=116.90  Aligned_cols=190  Identities=20%  Similarity=0.249  Sum_probs=123.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|.+++++|+++|++|++++|+.+......        .+...++.++.+|+.|.+++..+++..     ++|+
T Consensus        12 tGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500         12 TGGTSGIGLETARQFLAEGARVAITGRDPASLEAAR--------AELGESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHH--------HHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999998754322111        111246788999999988776655421     6899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhC----CCCCcEEEEee-ceeeccCCCCCccCccccchhhHHH
Q 021331           76 VYDINGREA--------------------DEVEPILDAL----PNLEQFIYCSS-AGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~----~~~~~~i~~Ss-~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      +||++|...                    .++.++++++    ....++|++|| .+.++...    ...|+.+|...+.
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~----~~~Y~~sK~a~~~  159 (249)
T PRK06500         84 VFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPN----SSVYAASKAALLS  159 (249)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCC----ccHHHHHHHHHHH
Confidence            999998521                    1133444443    23346777777 44454322    2368999988887


Q ss_pred             HHH-------hcCCceEEEecCeeeCCCCC-----CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          131 VLE-------SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       131 ~~~-------~~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      +++       ..+++++++||+.+++|...     ......+...+....++         .-+.+.+|+|++++.++..
T Consensus       160 ~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~~~~l~~~  230 (249)
T PRK06500        160 LAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPL---------GRFGTPEEIAKAVLYLASD  230 (249)
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHcCc
Confidence            773       24799999999999987311     11112222333222221         1244789999999998875


Q ss_pred             Cc--cCCceEEecCC
Q 021331          199 EK--ASRQVFNISGE  211 (314)
Q Consensus       199 ~~--~~~~~~~i~~~  211 (314)
                      +.  ..|..+.+.++
T Consensus       231 ~~~~~~g~~i~~~gg  245 (249)
T PRK06500        231 ESAFIVGSEIIVDGG  245 (249)
T ss_pred             cccCccCCeEEECCC
Confidence            32  25666777665

>PRK07069 short chain dehydrogenase; Validated

Probab=99.57  E-value=1.8e-14  Score=120.89  Aligned_cols=194  Identities=18%  Similarity=0.213  Sum_probs=124.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+||.++++.|+++|++|++++|+.......+.    ..+...  ...+.++.+|+.|++++.++++..     ++
T Consensus         5 tG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          5 TGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFA----AEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH----HHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            7999999999999999999999999987322111110    001000  123456789999999888877632     58


Q ss_pred             cEEEEcCCCCcc------------------------cHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           74 DVVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      |+|||++|....                        .++.++..+.  +.++||++||...+.....   ...|+.+|..
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~---~~~Y~~sK~a  157 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPD---YTAYNASKAA  157 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCC---CchhHHHHHH
Confidence            999999986321                        2445666665  4578999999776643322   2258888988


Q ss_pred             HHHHHHh-------c--CCceEEEecCeeeCCCCCCchhH-----HHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHH
Q 021331          128 TESVLES-------K--GVNWTSLRPVYIYGPLNYNPVEE-----WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  193 (314)
Q Consensus       128 ~e~~~~~-------~--~~~~~ilR~~~v~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  193 (314)
                      .+.+.+.       .  +++++.++|+.+.+|.... ...     .....+...         .....+.+++|++++++
T Consensus       158 ~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~va~~~~  227 (251)
T PRK07069        158 VASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDP-IFQRLGEEEATRKLARG---------VPLGRLGEPDDVAHAVL  227 (251)
T ss_pred             HHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhH-HhhhccchhHHHHHhcc---------CCCCCCcCHHHHHHHHH
Confidence            7776642       2  4788999999988874211 110     011111111         11123567899999999


Q ss_pred             HHhcCCc--cCCceEEecCC
Q 021331          194 QVLGNEK--ASRQVFNISGE  211 (314)
Q Consensus       194 ~~l~~~~--~~~~~~~i~~~  211 (314)
                      .++..+.  ..|..+.+.++
T Consensus       228 ~l~~~~~~~~~g~~i~~~~g  247 (251)
T PRK07069        228 YLASDESRFVTGAELVIDGG  247 (251)
T ss_pred             HHcCccccCccCCEEEECCC
Confidence            9876532  25667777665

>PRK05717 oxidoreductase; Validated

Probab=99.57  E-value=4.3e-14  Score=119.00  Aligned_cols=192  Identities=17%  Similarity=0.152  Sum_probs=125.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+........        .+...++.++.+|++|++++.+++++.     .+|+
T Consensus        16 tG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~--------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717         16 TGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVA--------KALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             eCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH--------HHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999988764322110        011246788999999998887665432     4899


Q ss_pred             EEEcCCCCc----------------------ccHHHHHHhCC-----CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA----------------------DEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~----------------------~~~~~~~~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||++|...                      .++.++++++.     ...++|++||...+...   +....|+.+|...
T Consensus        88 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~---~~~~~Y~~sKaa~  164 (255)
T PRK05717         88 LVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE---PDTEAYAASKGGL  164 (255)
T ss_pred             EEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC---CCCcchHHHHHHH
Confidence            999998631                      11334444442     34689999986554322   2223689999888


Q ss_pred             HHHHH----hc--CCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          129 ESVLE----SK--GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       129 e~~~~----~~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      +.+.+    ++  ++++..++|+.+.++.........+........+         ...+.+++|+|.+++.++....  
T Consensus       165 ~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~~~~~  235 (255)
T PRK05717        165 LALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHP---------AGRVGTVEDVAAMVAWLLSRQAGF  235 (255)
T ss_pred             HHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHhhcCC---------CCCCcCHHHHHHHHHHHcCchhcC
Confidence            77764    22  4889999999998874322111111111111111         1236688999999998886532  


Q ss_pred             cCCceEEecCCc
Q 021331          201 ASRQVFNISGEK  212 (314)
Q Consensus       201 ~~~~~~~i~~~~  212 (314)
                      ..|..+.+.++.
T Consensus       236 ~~g~~~~~~gg~  247 (255)
T PRK05717        236 VTGQEFVVDGGM  247 (255)
T ss_pred             ccCcEEEECCCc
Confidence            257788887664

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.56  E-value=6.1e-14  Score=117.52  Aligned_cols=193  Identities=16%  Similarity=0.162  Sum_probs=126.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.+++++|+++|++|++++|+.....       ...+......+.++.+|+++++++..++++.     ++|+
T Consensus        11 tGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   83 (248)
T TIGR01832        11 TGANTGLGQGIAVGLAEAGADIVGAGRSEPSET-------QQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI   83 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCchHHHH-------HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998652210       0111122346889999999999888777532     5999


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHh----CC--C-CCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||++|....                    +...++++    +.  + ..++|++||...+....   ....|..+|...
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---~~~~Y~~sKaa~  160 (248)
T TIGR01832        84 LVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI---RVPSYTASKHGV  160 (248)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC---CCchhHHHHHHH
Confidence            9999986321                    11223333    22  2 46899999987765332   223688899888


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      +.+.+       .+++++++++||.+..+...... ...........    +     ....+++.+|+|++++.+++...
T Consensus       161 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~dva~~~~~l~s~~~  231 (248)
T TIGR01832       161 AGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILER----I-----PAGRWGTPDDIGGPAVFLASSAS  231 (248)
T ss_pred             HHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhc----C-----CCCCCcCHHHHHHHHHHHcCccc
Confidence            77653       24799999999998876321100 00111111111    1     11357889999999999997533


Q ss_pred             --cCCceEEecCCc
Q 021331          201 --ASRQVFNISGEK  212 (314)
Q Consensus       201 --~~~~~~~i~~~~  212 (314)
                        ..|.++.+.++.
T Consensus       232 ~~~~G~~i~~dgg~  245 (248)
T TIGR01832       232 DYVNGYTLAVDGGW  245 (248)
T ss_pred             cCcCCcEEEeCCCE
Confidence              256777776653

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.56  E-value=9.9e-14  Score=116.98  Aligned_cols=198  Identities=16%  Similarity=0.159  Sum_probs=127.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|++.|++|+++.++.......+.    ..+.....++.++.+|++|.+++.++++..     .+|+
T Consensus        15 tGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~   90 (258)
T PRK09134         15 TGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALA----AEIRALGRRAVALQADLADEAEVRALVARASAALGPITL   90 (258)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999988765432111110    011111246888999999999888877632     4899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhCC------CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |||++|...                    .++..+++++.      ...++|+++|...+...   |....|+.+|...+
T Consensus        91 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~---p~~~~Y~~sK~a~~  167 (258)
T PRK09134         91 LVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLN---PDFLSYTLSKAALW  167 (258)
T ss_pred             EEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCC---CCchHHHHHHHHHH
Confidence            999998521                    12233333322      23578888876554321   22225999998877


Q ss_pred             HHHHh----c--CCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCC
Q 021331          130 SVLES----K--GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  203 (314)
Q Consensus       130 ~~~~~----~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~  203 (314)
                      .+.+.    .  ++.++.++||.+..+....  ...+ .......+  . +      ...+++|+|++++.+++++...+
T Consensus       168 ~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~--~~~~-~~~~~~~~--~-~------~~~~~~d~a~~~~~~~~~~~~~g  235 (258)
T PRK09134        168 TATRTLAQALAPRIRVNAIGPGPTLPSGRQS--PEDF-ARQHAATP--L-G------RGSTPEEIAAAVRYLLDAPSVTG  235 (258)
T ss_pred             HHHHHHHHHhcCCcEEEEeecccccCCcccC--hHHH-HHHHhcCC--C-C------CCcCHHHHHHHHHHHhcCCCcCC
Confidence            76542    1  3889999999887643211  1111 11111111  1 1      24668999999999998766678


Q ss_pred             ceEEecCCccccHH
Q 021331          204 QVFNISGEKYVTFD  217 (314)
Q Consensus       204 ~~~~i~~~~~~s~~  217 (314)
                      +.+++.++..+++.
T Consensus       236 ~~~~i~gg~~~~~~  249 (258)
T PRK09134        236 QMIAVDGGQHLAWL  249 (258)
T ss_pred             CEEEECCCeecccc
Confidence            89999988766554

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.56  E-value=9.1e-14  Score=117.01  Aligned_cols=191  Identities=17%  Similarity=0.189  Sum_probs=126.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|.++|++|+++.++.......+.          ..++.++.+|++|++++.++++..     ++|+
T Consensus        13 tGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~----------~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06463         13 TGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR----------EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH----------hCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999988766543221111          125788999999999888887642     6899


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||++|....                    +    ++.++..+.  +..++|++||...++...  +....|..+|...+
T Consensus        83 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~--~~~~~Y~asKaa~~  160 (255)
T PRK06463         83 LVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAA--EGTTFYAITKAGII  160 (255)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCC--CCccHhHHHHHHHH
Confidence            9999986311                    1    234455454  456899999977664211  11125889998877


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCC----chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      .+.+       ..++++..++|+.+-.+....    .-...+........         ....+...+|+|++++.++..
T Consensus       161 ~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~s~  231 (255)
T PRK06463        161 ILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKT---------VLKTTGKPEDIANIVLFLASD  231 (255)
T ss_pred             HHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCC---------CcCCCcCHHHHHHHHHHHcCh
Confidence            7654       257999999999876542110    00011111111111         122356789999999999876


Q ss_pred             Cc--cCCceEEecCCc
Q 021331          199 EK--ASRQVFNISGEK  212 (314)
Q Consensus       199 ~~--~~~~~~~i~~~~  212 (314)
                      ..  ..|..+.+.++.
T Consensus       232 ~~~~~~G~~~~~dgg~  247 (255)
T PRK06463        232 DARYITGQVIVADGGR  247 (255)
T ss_pred             hhcCCCCCEEEECCCe
Confidence            43  367889988875

>PRK07985 oxidoreductase; Provisional

Probab=99.56  E-value=9.5e-14  Score=119.23  Aligned_cols=196  Identities=21%  Similarity=0.263  Sum_probs=127.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCccc-ccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+.... ...+.    ..+.+...++.++.+|++|++++.+++++.     ++|
T Consensus        55 TGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id  130 (294)
T PRK07985         55 TGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVK----KIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLD  130 (294)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHH----HHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            79999999999999999999999887654321 00010    011112346778999999998888776532     589


Q ss_pred             EEEEcCCCCc---------------------ccHHHHHHh----CCCCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           75 VVYDINGREA---------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        75 ~vi~~a~~~~---------------------~~~~~~~~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      ++||++|...                     .++..++++    +....++|++||...+....   ....|+.+|...+
T Consensus       131 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~---~~~~Y~asKaal~  207 (294)
T PRK07985        131 IMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSP---HLLDYAATKAAIL  207 (294)
T ss_pred             EEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCC---CcchhHHHHHHHH
Confidence            9999998521                     112223333    33335899999987764322   2226899998877


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      .+.+       .+|+++.+++|+.+.++.... ..............+         ...+...+|+|++++.++.... 
T Consensus       208 ~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~r~~~pedva~~~~fL~s~~~~  278 (294)
T PRK07985        208 NYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTP---------MKRAGQPAELAPVYVYLASQESS  278 (294)
T ss_pred             HHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCC---------CCCCCCHHHHHHHHHhhhChhcC
Confidence            6653       358999999999999884211 111111112211111         1235568999999999997633 


Q ss_pred             -cCCceEEecCCc
Q 021331          201 -ASRQVFNISGEK  212 (314)
Q Consensus       201 -~~~~~~~i~~~~  212 (314)
                       ..|.++.+.++.
T Consensus       279 ~itG~~i~vdgG~  291 (294)
T PRK07985        279 YVTAEVHGVCGGE  291 (294)
T ss_pred             CccccEEeeCCCe
Confidence             267888888875

>PRK06398 aldose dehydrogenase; Validated

Probab=99.55  E-value=1.1e-13  Score=116.72  Aligned_cols=187  Identities=15%  Similarity=0.173  Sum_probs=124.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|++.|++|++++|+....                .++.++.+|++|++++.++++..     ++|+
T Consensus        12 tGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~----------------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   75 (258)
T PRK06398         12 TGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY----------------NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDI   75 (258)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCCcccc----------------CceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999876541                35788999999999888877642     5899


Q ss_pred             EEEcCCCCc--------------------ccH----HHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~----~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||++|...                    .++    +.++..+.  +..++|++||...+....   ....|+.+|...+
T Consensus        76 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~~sKaal~  152 (258)
T PRK06398         76 LVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTR---NAAAYVTSKHAVL  152 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCC---CCchhhhhHHHHH
Confidence            999998621                    112    22333332  457899999976654322   2226899999888


Q ss_pred             HHHHh------cCCceEEEecCeeeCCCCCCc-------hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          130 SVLES------KGVNWTSLRPVYIYGPLNYNP-------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       130 ~~~~~------~~~~~~ilR~~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      .+.+.      .++++..++||.+-.+.....       -..........      ++.......+...+|+|++++.++
T Consensus       153 ~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~p~eva~~~~~l~  226 (258)
T PRK06398        153 GLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIRE------WGEMHPMKRVGKPEEVAYVVAFLA  226 (258)
T ss_pred             HHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHh------hhhcCCcCCCcCHHHHHHHHHHHc
Confidence            77642      238889999998765521000       00000000000      011111224567899999999998


Q ss_pred             cCCc--cCCceEEecCCc
Q 021331          197 GNEK--ASRQVFNISGEK  212 (314)
Q Consensus       197 ~~~~--~~~~~~~i~~~~  212 (314)
                      ....  ..|.++.+.++.
T Consensus       227 s~~~~~~~G~~i~~dgg~  244 (258)
T PRK06398        227 SDLASFITGECVTVDGGL  244 (258)
T ss_pred             CcccCCCCCcEEEECCcc
Confidence            7532  367788888775

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.55  E-value=1.1e-13  Score=116.43  Aligned_cols=196  Identities=13%  Similarity=0.134  Sum_probs=128.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|.++|++|++++|+........     ..+.....++.++.+|++|.+++.+++...     ++|+
T Consensus        17 tG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   91 (255)
T PRK06113         17 TGAGAGIGKEIAITFATAGASVVVSDINADAANHVV-----DEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVDI   91 (255)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998765422110     011111246788899999999888776532     5899


Q ss_pred             EEEcCCCCc-------------------ccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           76 VYDINGREA-------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        76 vi~~a~~~~-------------------~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      +||+++...                   .++.++++.+    .  +..++|++||.......   +....|+.+|...+.
T Consensus        92 li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---~~~~~Y~~sK~a~~~  168 (255)
T PRK06113         92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN---INMTSYASSKAAASH  168 (255)
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCC---CCcchhHHHHHHHHH
Confidence            999998521                   1223333333    2  33589999996654222   222368999998888


Q ss_pred             HHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--c
Q 021331          131 VLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--A  201 (314)
Q Consensus       131 ~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~  201 (314)
                      +++       ..++.++++.|+.+..+.......+.+........+         ...+...+|++++++.++....  .
T Consensus       169 ~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~d~a~~~~~l~~~~~~~~  239 (255)
T PRK06113        169 LVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTP---------IRRLGQPQDIANAALFLCSPAASWV  239 (255)
T ss_pred             HHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCccccCc
Confidence            764       246889999999887663222112222222222111         1235678999999999987532  2


Q ss_pred             CCceEEecCCcc
Q 021331          202 SRQVFNISGEKY  213 (314)
Q Consensus       202 ~~~~~~i~~~~~  213 (314)
                      .|+++++.++..
T Consensus       240 ~G~~i~~~gg~~  251 (255)
T PRK06113        240 SGQILTVSGGGV  251 (255)
T ss_pred             cCCEEEECCCcc
Confidence            688999988854

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.55  E-value=3.1e-14  Score=119.95  Aligned_cols=189  Identities=15%  Similarity=0.065  Sum_probs=118.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||+|++|.++++.|+++|++|++++|+........     ........++.++.+|++|++++.+++. .++|+|||++
T Consensus         8 tGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~id~vi~~a   81 (257)
T PRK09291          8 TGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALR-----AEAARRGLALRVEKLDLTDAIDRAQAAE-WDVDVLLNNA   81 (257)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcceEEEeeCCCHHHHHHHhc-CCCCEEEECC
Confidence            799999999999999999999999999764421100     0011112468899999999999988774 3799999999


Q ss_pred             CCCc--------------------cc----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHH-
Q 021331           81 GREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLE-  133 (314)
Q Consensus        81 ~~~~--------------------~~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~-  133 (314)
                      |...                    .+    ++.++..+.  +.++||++||...+..   .+....|+.+|...|.+.+ 
T Consensus        82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~---~~~~~~Y~~sK~a~~~~~~~  158 (257)
T PRK09291         82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLIT---GPFTGAYCASKHALEAIAEA  158 (257)
T ss_pred             CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccC---CCCcchhHHHHHHHHHHHHH
Confidence            8531                    11    223344433  5579999999654322   1223368889988887643 


Q ss_pred             ------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCC-CeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          134 ------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       134 ------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                            ..|++++++||+.+..+... .....+........ .+.. .........+..+|++..++.++..+.
T Consensus       159 l~~~~~~~gi~~~~v~pg~~~t~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~  230 (257)
T PRK09291        159 MHAELKPFGIQVATVNPGPYLTGFND-TMAETPKRWYDPARNFTDP-EDLAFPLEQFDPQEMIDAMVEVIPADT  230 (257)
T ss_pred             HHHHHHhcCcEEEEEecCcccccchh-hhhhhhhhhcchhhHHHhh-hhhhccccCCCHHHHHHHHHHHhcCCC
Confidence                  36899999999987543211 01110100000000 0111 111222355788999999998887654

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.55  E-value=5.9e-14  Score=118.29  Aligned_cols=203  Identities=14%  Similarity=0.155  Sum_probs=123.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|+++.++.......... ..+.+.....++.++.+|++|++++.+++.+.     ++|+
T Consensus        14 tGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   92 (257)
T PRK12744         14 AGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEE-TVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDI   92 (257)
T ss_pred             ECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHH-HHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhCCCCE
Confidence            79999999999999999999988777654321111100 00111112246888999999999998877642     6899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhC----CCCCcEEEE-eec-eeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEVEPILDAL----PNLEQFIYC-SSA-GVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~----~~~~~~i~~-Ss~-~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||...                    .++..+++++    ....+++++ ||. +.+.     |....|+.+|...+
T Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~-----~~~~~Y~~sK~a~~  167 (257)
T PRK12744         93 AINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT-----PFYSAYAGSKAPVE  167 (257)
T ss_pred             EEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC-----CCcccchhhHHHHH
Confidence            999998621                    1122233332    223466765 332 3322     22336999999888


Q ss_pred             HHHHh-------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCcc-
Q 021331          130 SVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA-  201 (314)
Q Consensus       130 ~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-  201 (314)
                      .+.+.       .+++++.++||.+.++.............  ......  ........+.+++|+|+++..+++.... 
T Consensus       168 ~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~dva~~~~~l~~~~~~~  243 (257)
T PRK12744        168 HFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAY--HKTAAA--LSPFSKTGLTDIEDIVPFIRFLVTDGWWI  243 (257)
T ss_pred             HHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhc--cccccc--ccccccCCCCCHHHHHHHHHHhhccccee
Confidence            88743       36999999999987763211000000000  000000  0111112477899999999999985322 


Q ss_pred             CCceEEecCCcc
Q 021331          202 SRQVFNISGEKY  213 (314)
Q Consensus       202 ~~~~~~i~~~~~  213 (314)
                      .|+++++.++..
T Consensus       244 ~g~~~~~~gg~~  255 (257)
T PRK12744        244 TGQTILINGGYT  255 (257)
T ss_pred             ecceEeecCCcc
Confidence            578999988753

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.55  E-value=9.2e-14  Score=116.77  Aligned_cols=193  Identities=15%  Similarity=0.187  Sum_probs=125.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC------Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~------~~d   74 (314)
                      |||+|+||.++++.|+++|++|+++.++.......+.       .....++.++.+|+.|++++.++++..      .+|
T Consensus        11 tGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642         11 TGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALA-------DELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             eCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-------HHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            7999999999999999999999887654332111110       011246888999999999888887642      289


Q ss_pred             EEEEcCCCC--------------------------cccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccc
Q 021331           75 VVYDINGRE--------------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRH  122 (314)
Q Consensus        75 ~vi~~a~~~--------------------------~~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (314)
                      ++||+++..                          ..+...+++++    .  +..++|++||......  ..+. ..|+
T Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~--~~~~-~~Y~  160 (253)
T PRK08642         84 TVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNP--VVPY-HDYT  160 (253)
T ss_pred             EEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCC--CCCc-cchH
Confidence            999998742                          11122333332    2  4568999998543321  1122 2699


Q ss_pred             cchhhHHHHHHh-------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHH
Q 021331          123 KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  195 (314)
Q Consensus       123 ~~k~~~e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  195 (314)
                      .+|...+.+++.       .++.+..++||.+..+..................  +       ...+.+.+|++++++.+
T Consensus       161 ~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~va~~~~~l  231 (253)
T PRK08642        161 TAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATT--P-------LRKVTTPQEFADAVLFF  231 (253)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcC--C-------cCCCCCHHHHHHHHHHH
Confidence            999998888753       4688999999988765221111112222222111  1       12478899999999999


Q ss_pred             hcCC--ccCCceEEecCCc
Q 021331          196 LGNE--KASRQVFNISGEK  212 (314)
Q Consensus       196 l~~~--~~~~~~~~i~~~~  212 (314)
                      +...  ...|..+.+.++.
T Consensus       232 ~~~~~~~~~G~~~~vdgg~  250 (253)
T PRK08642        232 ASPWARAVTGQNLVVDGGL  250 (253)
T ss_pred             cCchhcCccCCEEEeCCCe
Confidence            9753  2378889888774

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.54  E-value=1.2e-13  Score=116.42  Aligned_cols=194  Identities=16%  Similarity=0.199  Sum_probs=124.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......     .+.....++.++.+|+++++++.+++++.     ++|+
T Consensus        15 tGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   89 (258)
T PRK06949         15 TGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRA-----EIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDI   89 (258)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6999999999999999999999999998655321110     11111246889999999999888877632     5899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhC----C----------CCCcEEEEeeceeeccCCCCCccCcc
Q 021331           76 VYDINGREA--------------------DEVEPILDAL----P----------NLEQFIYCSSAGVYLKSDLLPHCESR  121 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~----~----------~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (314)
                      +||+++...                    .+...+++++    .          ...++|++||...+...   +....|
T Consensus        90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---~~~~~Y  166 (258)
T PRK06949         90 LVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL---PQIGLY  166 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC---CCccHH
Confidence            999998521                    1112222221    1          13589999997665322   222258


Q ss_pred             ccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHH
Q 021331          122 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       122 ~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                      ..+|...+.+.+       ..++++++++||.++++.............+..  .++       ...+...+|+++++..
T Consensus       167 ~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~--~~~-------~~~~~~p~~~~~~~~~  237 (258)
T PRK06949        167 CMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVS--MLP-------RKRVGKPEDLDGLLLL  237 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHh--cCC-------CCCCcCHHHHHHHHHH
Confidence            888887777653       257999999999999885322111111111111  111       1235557999999999


Q ss_pred             HhcCCc--cCCceEEecCC
Q 021331          195 VLGNEK--ASRQVFNISGE  211 (314)
Q Consensus       195 ~l~~~~--~~~~~~~i~~~  211 (314)
                      ++....  ..|.++.+.++
T Consensus       238 l~~~~~~~~~G~~i~~dgg  256 (258)
T PRK06949        238 LAADESQFINGAIISADDG  256 (258)
T ss_pred             HhChhhcCCCCcEEEeCCC
Confidence            987532  36677777665

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.54  E-value=4.7e-14  Score=117.55  Aligned_cols=174  Identities=21%  Similarity=0.226  Sum_probs=117.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|.+++++|+++|++|++++|+........     .++.....++.++.+|+++++++.++++..     ++|+
T Consensus        13 tG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (239)
T PRK07666         13 TGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVA-----EEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDI   87 (239)
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccE
Confidence            799999999999999999999999999865422111     112222356888999999999988887642     6899


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |||++|....                    ++.++.+++    .  +.+++|++||...+....   ....|+.+|...+
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~---~~~~Y~~sK~a~~  164 (239)
T PRK07666         88 LINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAA---VTSAYSASKFGVL  164 (239)
T ss_pred             EEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCC---CCcchHHHHHHHH
Confidence            9999986321                    112233332    2  456899999865543222   1225888888766


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      .+++       ..+++++++||+.+.++.....           ..  .. +.   ...++..+|+|++++.++.++
T Consensus       165 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~-----------~~--~~-~~---~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        165 GLTESLMQEVRKHNIRVTALTPSTVATDMAVDL-----------GL--TD-GN---PDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             HHHHHHHHHhhccCcEEEEEecCcccCcchhhc-----------cc--cc-cC---CCCCCCHHHHHHHHHHHHhCC
Confidence            6653       3589999999999887621100           00  00 11   124577899999999999875

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.54  E-value=1.3e-13  Score=115.36  Aligned_cols=194  Identities=16%  Similarity=0.157  Sum_probs=124.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEE-EcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|++|.++++.|++.|++|+++ +|+.........     .+.....++.++.+|++|++++..+++..     ++|
T Consensus        11 ~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (247)
T PRK05565         11 TGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLE-----EIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKID   85 (247)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH-----HHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            6999999999999999999999998 887544211110     11111246889999999999888877543     689


Q ss_pred             EEEEcCCCCcc--------------------cHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +|||++|....                    +..++++.    +.  +.+++|++||...+....   ....|..+|...
T Consensus        86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~---~~~~y~~sK~a~  162 (247)
T PRK05565         86 ILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGAS---CEVLYSASKGAV  162 (247)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCC---CccHHHHHHHHH
Confidence            99999986421                    12223333    22  456799999965543222   222577787665


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      +.+++       ..+++++.+||+.+..+.... .............         ....+...+|++++++.++.... 
T Consensus       163 ~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~  232 (247)
T PRK05565        163 NAFTKALAKELAPSGIRVNAVAPGAIDTEMWSS-FSEEDKEGLAEEI---------PLGRLGKPEEIAKVVLFLASDDAS  232 (247)
T ss_pred             HHHHHHHHHHHHHcCeEEEEEEECCccCccccc-cChHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCCccC
Confidence            55542       358999999999987653221 1111111111111         11235678999999999997633 


Q ss_pred             -cCCceEEecCCc
Q 021331          201 -ASRQVFNISGEK  212 (314)
Q Consensus       201 -~~~~~~~i~~~~  212 (314)
                       ..|+++++.++.
T Consensus       233 ~~~g~~~~~~~~~  245 (247)
T PRK05565        233 YITGQIITVDGGW  245 (247)
T ss_pred             CccCcEEEecCCc
Confidence             367788887764

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.54  E-value=9.8e-14  Score=117.14  Aligned_cols=198  Identities=19%  Similarity=0.233  Sum_probs=127.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh--ccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......     .+..  ...++.++.+|++|++++..+++..     ++
T Consensus        13 tGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   87 (260)
T PRK07063         13 TGAAQGIGAAIARAFAREGAAVALADLDAALAERAAA-----AIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPL   87 (260)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999997654321110     1111  1246888999999998888877632     68


Q ss_pred             cEEEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           74 DVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        74 d~vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      |++||++|....                    +    ++.++..+.  +..++|++||...+...   +....|+.+|..
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~~sKaa  164 (260)
T PRK07063         88 DVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII---PGCFPYPVAKHG  164 (260)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC---CCchHHHHHHHH
Confidence            999999986311                    1    122333332  44689999997654322   122258889988


Q ss_pred             HHHHHHh-------cCCceEEEecCeeeCCCCCCch-----hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHH
Q 021331          128 TESVLES-------KGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  195 (314)
Q Consensus       128 ~e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  195 (314)
                      .+.+.+.       .|+++..++||.+-.+.....+     ............  +       ...+...+|+|.+++.+
T Consensus       165 ~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~-------~~r~~~~~~va~~~~fl  235 (260)
T PRK07063        165 LLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQ--P-------MKRIGRPEEVAMTAVFL  235 (260)
T ss_pred             HHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcC--C-------CCCCCCHHHHHHHHHHH
Confidence            8777642       4799999999988665211100     000011111111  1       11355789999999999


Q ss_pred             hcCCc--cCCceEEecCCcccc
Q 021331          196 LGNEK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       196 l~~~~--~~~~~~~i~~~~~~s  215 (314)
                      +.+..  ..|..+.+.++..+.
T Consensus       236 ~s~~~~~itG~~i~vdgg~~~~  257 (260)
T PRK07063        236 ASDEAPFINATCITIDGGRSVL  257 (260)
T ss_pred             cCccccccCCcEEEECCCeeee
Confidence            87632  367888888876443

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.54  E-value=6e-14  Score=119.30  Aligned_cols=169  Identities=18%  Similarity=0.140  Sum_probs=115.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||||+||.++++.|+++|++|++++|+.+.......         ....+.++.+|++|++++.++++..     ++|+
T Consensus        11 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (273)
T PRK07825         11 TGGARGIGLATARALAALGARVAIGDLDEALAKETAA---------ELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDV   81 (273)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---------HhccceEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999988655321110         0124778999999999887766532     5899


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||++|....                    +    ++.++..+.  +..++|++||...+...   |....|..+|...+
T Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asKaa~~  158 (273)
T PRK07825         82 LVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPV---PGMATYCASKHAVV  158 (273)
T ss_pred             EEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCC---CCCcchHHHHHHHH
Confidence            9999986321                    1    222334443  55689999997654322   22235888887665


Q ss_pred             HHH-------HhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          130 SVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       130 ~~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.       ...|+++++++|+.+-.+...             +..    .  .....+++.+|+|++++.++.++.
T Consensus       159 ~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~-------------~~~----~--~~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        159 GFTDAARLELRGTGVHVSVVLPSFVNTELIA-------------GTG----G--AKGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             HHHHHHHHHhhccCcEEEEEeCCcCcchhhc-------------ccc----c--ccCCCCCCHHHHHHHHHHHHhCCC
Confidence            443       346899999999987554110             000    0  011246889999999999998754

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.54  E-value=6.1e-14  Score=117.57  Aligned_cols=180  Identities=16%  Similarity=0.095  Sum_probs=118.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|.++++.|+++|++|++++|+++.......        ....++.++.+|+.|.+++.++++..     ++|+
T Consensus         6 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   77 (248)
T PRK10538          6 TGATAGFGECITRRFIQQGHKVIATGRRQERLQELKD--------ELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV   77 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------HhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654221100        01246888999999999888877532     6999


Q ss_pred             EEEcCCCCcc---------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      |||++|....                     +    ++.++..+.  +..++|++||...+...   +....|+.+|...
T Consensus        78 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---~~~~~Y~~sK~~~  154 (248)
T PRK10538         78 LVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY---AGGNVYGATKAFV  154 (248)
T ss_pred             EEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCC---CCCchhHHHHHHH
Confidence            9999985310                     1    233444443  55789999997654221   1122588889888


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      +.+.+       ..++.+.+++||.+.|+......+........  .   .+.    ...++..+|+|++++.++..+.
T Consensus       155 ~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~--~---~~~----~~~~~~~~dvA~~~~~l~~~~~  224 (248)
T PRK10538        155 RQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAE--K---TYQ----NTVALTPEDVSEAVWWVATLPA  224 (248)
T ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHH--h---hcc----ccCCCCHHHHHHHHHHHhcCCC
Confidence            77763       24789999999999865321100000000000  0   000    1135689999999999997654

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.54  E-value=1.1e-13  Score=115.21  Aligned_cols=185  Identities=18%  Similarity=0.187  Sum_probs=121.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|.+++++|+++|++|++++|++........     .+... .++.++.+|+.|++++.+++++.     ++|+
T Consensus        12 tGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-----~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (237)
T PRK07326         12 TGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAA-----ELNNK-GNVLGLAADVRDEADVQRAVDAIVAAFGGLDV   85 (237)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHH-----HHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999998754321111     11111 46888999999999888877642     6899


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHh----CC-CCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           76 VYDINGREAD--------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      |||+++....                    +...++++    +. +.+++|++||...+....   ....|..+|...+.
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~---~~~~y~~sk~a~~~  162 (237)
T PRK07326         86 LIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFA---GGAAYNASKFGLVG  162 (237)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCC---CCchHHHHHHHHHH
Confidence            9999876321                    11223333    32 456799999976543221   12257778876655


Q ss_pred             HHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCcc-C
Q 021331          131 VLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA-S  202 (314)
Q Consensus       131 ~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~  202 (314)
                      +.+       ..+++++++||+.+.++.....             +    ..  .....+..+|++++++.++..+.. .
T Consensus       163 ~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~-------------~----~~--~~~~~~~~~d~a~~~~~~l~~~~~~~  223 (237)
T PRK07326        163 FSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT-------------P----SE--KDAWKIQPEDIAQLVLDLLKMPPRTL  223 (237)
T ss_pred             HHHHHHHHhcccCcEEEEEeeccccCcccccc-------------c----ch--hhhccCCHHHHHHHHHHHHhCCcccc
Confidence            543       3589999999998876531110             0    00  001136789999999999987543 3


Q ss_pred             CceEEecCCcc
Q 021331          203 RQVFNISGEKY  213 (314)
Q Consensus       203 ~~~~~i~~~~~  213 (314)
                      ...+.+..+.+
T Consensus       224 ~~~~~~~~~~~  234 (237)
T PRK07326        224 PSKIEVRPSRP  234 (237)
T ss_pred             ccceEEecCCC
Confidence            44555554443

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.53  E-value=2.8e-13  Score=113.96  Aligned_cols=196  Identities=16%  Similarity=0.222  Sum_probs=128.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|.||.++++.|.+.|++|++++|+.++.....     ..+.....++.++.+|+.|++++.+++++.     ++|+
T Consensus        12 tGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (254)
T PRK07478         12 TGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLV-----AEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDI   86 (254)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999876532111     112222346888999999999888777632     6899


Q ss_pred             EEEcCCCCcc-------------------------cHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREAD-------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~-------------------------~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||....                         .++.++..+.  +..++|++||...+..  ..+....|..+|...
T Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~--~~~~~~~Y~~sK~a~  164 (254)
T PRK07478         87 AFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTA--GFPGMAAYAASKAGL  164 (254)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhcc--CCCCcchhHHHHHHH
Confidence            9999986310                         0223344443  4568999999655421  112223689999888


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCc-hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      +.+.+       ..++.+..++||.+-.+..... ........+....+         ...+...+|+|++++.++.++.
T Consensus       165 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~s~~~  235 (254)
T PRK07478        165 IGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHA---------LKRMAQPEEIAQAALFLASDAA  235 (254)
T ss_pred             HHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCchh
Confidence            77653       2479999999999876621110 00111111111111         1235678999999999987632


Q ss_pred             --cCCceEEecCCc
Q 021331          201 --ASRQVFNISGEK  212 (314)
Q Consensus       201 --~~~~~~~i~~~~  212 (314)
                        ..|.++.+.++.
T Consensus       236 ~~~~G~~~~~dgg~  249 (254)
T PRK07478        236 SFVTGTALLVDGGV  249 (254)
T ss_pred             cCCCCCeEEeCCch
Confidence              267788887764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.53  E-value=2.3e-13  Score=114.72  Aligned_cols=194  Identities=13%  Similarity=0.170  Sum_probs=127.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|++.|++|++++|+... .. +.    +.+.+...++.++.+|+.+.+++..++++.     .+|+
T Consensus        21 tGas~gIG~~ia~~l~~~G~~v~~~~~~~~~-~~-~~----~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   94 (258)
T PRK06935         21 TGGNTGLGQGYAVALAKAGADIIITTHGTNW-DE-TR----RLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDI   94 (258)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCcHH-HH-HH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999987321 11 10    111222356889999999999888877643     5899


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||++|....                    +    ++.++..+.  +..++|++||...+....   ....|+.+|...+
T Consensus        95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~asK~a~~  171 (258)
T PRK06935         95 LVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGK---FVPAYTASKHGVA  171 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCC---CchhhHHHHHHHH
Confidence            9999986211                    1    222333343  456899999977654322   2226888998887


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      .+.+       .+|++++.++||.+..+.... .............  .+       ...+...+|++.+++.++.+.. 
T Consensus       172 ~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~~l~s~~~~  242 (258)
T PRK06935        172 GLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKR--IP-------AGRWGEPDDLMGAAVFLASRASD  242 (258)
T ss_pred             HHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhc--CC-------CCCCCCHHHHHHHHHHHcChhhc
Confidence            7753       357999999999987763211 0001111111111  11       1246778999999999887532 


Q ss_pred             -cCCceEEecCCc
Q 021331          201 -ASRQVFNISGEK  212 (314)
Q Consensus       201 -~~~~~~~i~~~~  212 (314)
                       ..|.++.+.++.
T Consensus       243 ~~~G~~i~~dgg~  255 (258)
T PRK06935        243 YVNGHILAVDGGW  255 (258)
T ss_pred             CCCCCEEEECCCe
Confidence             367888888774

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.53  E-value=9.2e-14  Score=117.97  Aligned_cols=181  Identities=14%  Similarity=0.146  Sum_probs=118.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-----CCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-----~~~d~   75 (314)
                      |||+|+||.+++++|.++|++|++++|+.+.......     .+.....++.++.+|+.|++++.++++.     .++|+
T Consensus         6 tGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          6 TGAASGLGRAIALRWAREGWRLALADVNEEGGEETLK-----LLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999988654321111     1111235688899999999888887753     26899


Q ss_pred             EEEcCCCCccc------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~~------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||++|....+                        ++.++..+.  +..++|++||...+...   +....|..+|...+
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---~~~~~Y~~sKaa~~  157 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQG---PAMSSYNVAKAGVV  157 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCC---CCchHHHHHHHHHH
Confidence            99999863211                        123444444  55789999997665432   22236888888755


Q ss_pred             HHH----H---hcCCceEEEecCeeeCCCCCCc--hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          130 SVL----E---SKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       130 ~~~----~---~~~~~~~ilR~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      .+.    .   ..++++++++|+.+.++.....  ..........  .        .....+++++|+|+.++.++.++
T Consensus       158 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~--~--------~~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        158 ALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVG--K--------LLEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHH--H--------HhhcCCCCHHHHHHHHHHHHhCC
Confidence            543    2   3579999999999987742110  0011100000  0        00123578999999999999863

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.53  E-value=2.1e-13  Score=115.28  Aligned_cols=198  Identities=13%  Similarity=0.232  Sum_probs=129.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh-ccCceEEEEecCCChhhHHHhhhcC----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~l~~~~~~~----~~d~   75 (314)
                      |||+|.||.++++.|+++|++|++++|+.+.......     .+.. ...++.++.+|++|+++++++++..    ++|+
T Consensus        14 tGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~iD~   88 (263)
T PRK08339         14 TASSKGIGFGVARVLARAGADVILLSRNEENLKKARE-----KIKSESNVDVSYIVADLTKREDLERTVKELKNIGEPDI   88 (263)
T ss_pred             eCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCCcE
Confidence            7999999999999999999999999998654221110     1111 1246889999999999888877642    5899


Q ss_pred             EEEcCCCCcc------------------------cHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~------------------------~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||++|....                        .++.++..+.  +..++|++||...+...   |....|..+|...+
T Consensus        89 lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~---~~~~~y~asKaal~  165 (263)
T PRK08339         89 FFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPI---PNIALSNVVRISMA  165 (263)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCC---CcchhhHHHHHHHH
Confidence            9999986311                        1344555554  45689999997764322   22225778887776


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCch----------hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHH
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  192 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  192 (314)
                      .+.+       .+|+++..+.||.+..+......          .........  ...       ....+...+|+|+++
T Consensus       166 ~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------p~~r~~~p~dva~~v  236 (263)
T PRK08339        166 GLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYA--KPI-------PLGRLGEPEEIGYLV  236 (263)
T ss_pred             HHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHh--ccC-------CcccCcCHHHHHHHH
Confidence            6653       35799999999988665210000          001111111  111       112466789999999


Q ss_pred             HHHhcCCc--cCCceEEecCCcccc
Q 021331          193 VQVLGNEK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       193 ~~~l~~~~--~~~~~~~i~~~~~~s  215 (314)
                      +.++....  ..|.++.+.++...|
T Consensus       237 ~fL~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        237 AFLASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             HHHhcchhcCccCceEEECCCcccc
Confidence            99987532  367888888876554

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.53  E-value=1.7e-13  Score=116.85  Aligned_cols=195  Identities=13%  Similarity=0.193  Sum_probs=128.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|.++++.|+++|++|++++|+.+......     ..+.....++.++.+|+.|++++..+++..     ++|+
T Consensus        16 tGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   90 (278)
T PRK08277         16 TGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVV-----AEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDI   90 (278)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111     111112346888999999998888776532     6899


Q ss_pred             EEEcCCCCcc------------------------c---------------HHHHHHhCC--CCCcEEEEeeceeeccCCC
Q 021331           76 VYDINGREAD------------------------E---------------VEPILDALP--NLEQFIYCSSAGVYLKSDL  114 (314)
Q Consensus        76 vi~~a~~~~~------------------------~---------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~  114 (314)
                      +||++|....                        .               .+.++..+.  +..++|++||...+.....
T Consensus        91 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~  170 (278)
T PRK08277         91 LINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTK  170 (278)
T ss_pred             EEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCCCC
Confidence            9999984210                        0               122333343  4568999999877643322


Q ss_pred             CCccCccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCch------hHHHHHHHHcCCCeecCCCCCceee
Q 021331          115 LPHCESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV------EEWFFHRLKAGRPIPIPGSGIQVTQ  181 (314)
Q Consensus       115 ~~~~e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~  181 (314)
                         ...|+.+|...+.+.+       ..++++..++|+.+..+......      .......+...         .....
T Consensus       171 ---~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r  238 (278)
T PRK08277        171 ---VPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAH---------TPMGR  238 (278)
T ss_pred             ---CchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhcc---------CCccC
Confidence               2268999988877764       24799999999999887321100      00111111111         11223


Q ss_pred             eeeHHHHHHHHHHHhcC-Cc--cCCceEEecCCc
Q 021331          182 LGHVKDLARAFVQVLGN-EK--ASRQVFNISGEK  212 (314)
Q Consensus       182 ~i~~~D~a~~~~~~l~~-~~--~~~~~~~i~~~~  212 (314)
                      +...+|+|++++.++.. ..  ..|..+.+.++.
T Consensus       239 ~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~  272 (278)
T PRK08277        239 FGKPEELLGTLLWLADEKASSFVTGVVLPVDGGF  272 (278)
T ss_pred             CCCHHHHHHHHHHHcCccccCCcCCCEEEECCCe
Confidence            56789999999998876 22  367888888774

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.53  E-value=1.7e-13  Score=115.36  Aligned_cols=195  Identities=15%  Similarity=0.177  Sum_probs=128.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     .+|+
T Consensus        17 tGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   91 (256)
T PRK06124         17 TGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAV-----AALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDI   91 (256)
T ss_pred             ECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            699999999999999999999999999865422111     112222346889999999999888777532     4799


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+++....                    +    .+.+++.+.  +..++|++||...+...   +....|..+|...+
T Consensus        92 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~---~~~~~Y~~sK~a~~  168 (256)
T PRK06124         92 LVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVAR---AGDAVYPAAKQGLT  168 (256)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCC---CCccHhHHHHHHHH
Confidence            9999986321                    1    222334443  55789999996554221   22236888888777


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      .+.+       ..++++..++|+.+.++...... ...+.......  .+       ...+++++|++++++.++.++. 
T Consensus       169 ~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~~a~~~~~l~~~~~~  239 (256)
T PRK06124        169 GLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQR--TP-------LGRWGRPEEIAGAAVFLASPAAS  239 (256)
T ss_pred             HHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhc--CC-------CCCCCCHHHHHHHHHHHcCcccC
Confidence            6653       24799999999999887421111 11111122211  11       1247889999999999998643 


Q ss_pred             -cCCceEEecCCc
Q 021331          201 -ASRQVFNISGEK  212 (314)
Q Consensus       201 -~~~~~~~i~~~~  212 (314)
                       ..|..+.+.++.
T Consensus       240 ~~~G~~i~~dgg~  252 (256)
T PRK06124        240 YVNGHVLAVDGGY  252 (256)
T ss_pred             CcCCCEEEECCCc
Confidence             257777777664

>PRK08017 oxidoreductase; Provisional

Probab=99.52  E-value=1e-13  Score=116.74  Aligned_cols=177  Identities=16%  Similarity=0.135  Sum_probs=118.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc------CCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~------~~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.... +.          ..++..+.+|+.|.+++.++++.      ..+|
T Consensus         8 tGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~-~~----------~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~   76 (256)
T PRK08017          8 TGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR-MN----------SLGFTGILLDLDDPESVERAADEVIALTDNRLY   76 (256)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHH-HH----------hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence            7999999999999999999999999998755321 11          13578899999999887776643      2578


Q ss_pred             EEEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      .+||++|....                    +    ++.+++.+.  +.+++|++||...+..   .+....|+.+|...
T Consensus        77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~---~~~~~~Y~~sK~~~  153 (256)
T PRK08017         77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIS---TPGRGAYAASKYAL  153 (256)
T ss_pred             EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccC---CCCccHHHHHHHHH
Confidence            99999886321                    0    122455554  5678999999644322   12223689999888


Q ss_pred             HHHH-------HhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCC-CeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          129 ESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       129 e~~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      +.+.       ...+++++++||+.+..+.     .    ..+.... ..++...+...+.+++++|+++++..+++++.
T Consensus       154 ~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~  224 (256)
T PRK08017        154 EAWSDALRMELRHSGIKVSLIEPGPIRTRF-----T----DNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPK  224 (256)
T ss_pred             HHHHHHHHHHHhhcCCEEEEEeCCCcccch-----h----hcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCC
Confidence            8764       3467999999998765441     1    1111111 11111122223467999999999999998765

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.52  E-value=2.4e-13  Score=114.17  Aligned_cols=196  Identities=17%  Similarity=0.234  Sum_probs=123.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcC-CcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc---------
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---------   70 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~---------   70 (314)
                      |||+|+||.++++.|.+.|++|++..++ .+.... ..    ..+......+..+.+|+.+.+++..+++.         
T Consensus        10 tGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK12747         10 TGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEE-TV----YEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRT   84 (252)
T ss_pred             eCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHH-HH----HHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhc
Confidence            7999999999999999999999887543 332111 10    11111134567888999998776655532         


Q ss_pred             --CCccEEEEcCCCCcc--------------------cH----HHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccc
Q 021331           71 --KGFDVVYDINGREAD--------------------EV----EPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKG  124 (314)
Q Consensus        71 --~~~d~vi~~a~~~~~--------------------~~----~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (314)
                        .++|++||+||....                    ++    +.++..+....++|++||...+....   ....|+.+
T Consensus        85 g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~~s  161 (252)
T PRK12747         85 GSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP---DFIAYSMT  161 (252)
T ss_pred             CCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCC---CchhHHHH
Confidence              158999999986311                    11    12333333446899999977653322   22269999


Q ss_pred             hhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          125 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       125 k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      |...+.+.+       ..++++..+.||.+.++..................        .....+.+++|+|+++..++.
T Consensus       162 Kaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~s  233 (252)
T PRK12747        162 KGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTI--------SAFNRLGEVEDIADTAAFLAS  233 (252)
T ss_pred             HHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhc--------CcccCCCCHHHHHHHHHHHcC
Confidence            988887664       35799999999999887321100000011111100        011346789999999999887


Q ss_pred             CCc--cCCceEEecCCc
Q 021331          198 NEK--ASRQVFNISGEK  212 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~  212 (314)
                      ...  ..|..+.+.++.
T Consensus       234 ~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        234 PDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             ccccCcCCcEEEecCCc
Confidence            532  367788887764

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.52  E-value=3.1e-13  Score=114.26  Aligned_cols=195  Identities=13%  Similarity=0.102  Sum_probs=124.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|+++++++.++++..     ++|+
T Consensus        16 tGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   90 (263)
T PRK07814         16 TGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVA-----EQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDI   90 (263)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111     111112356888999999999888777642     6899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhCC-------CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA--------------------DEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~~-------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      |||+|+...                    .++.++.+++.       +..++|++||......   .+....|+.+|..+
T Consensus        91 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~---~~~~~~Y~~sK~a~  167 (263)
T PRK07814         91 VVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLA---GRGFAAYGTAKAAL  167 (263)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCC---CCCCchhHHHHHHH
Confidence            999998521                    12334444432       3468999999543321   12222699999988


Q ss_pred             HHHHHh------cCCceEEEecCeeeCCCCCCc-hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC--
Q 021331          129 ESVLES------KGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--  199 (314)
Q Consensus       129 e~~~~~------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~--  199 (314)
                      +.+.+.      .++.++.++|+.+..+..... -...+........         ....+...+|+|++++.++...  
T Consensus       168 ~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~  238 (263)
T PRK07814        168 AHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKAT---------PLRRLGDPEDIAAAAVYLASPAGS  238 (263)
T ss_pred             HHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCcccc
Confidence            887753      247888899988765521100 0011111111111         1123457899999999998753  


Q ss_pred             ccCCceEEecCCc
Q 021331          200 KASRQVFNISGEK  212 (314)
Q Consensus       200 ~~~~~~~~i~~~~  212 (314)
                      ...+..+.+.++.
T Consensus       239 ~~~g~~~~~~~~~  251 (263)
T PRK07814        239 YLTGKTLEVDGGL  251 (263)
T ss_pred             CcCCCEEEECCCc
Confidence            2256777776653

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.52  E-value=3.5e-13  Score=113.35  Aligned_cols=195  Identities=14%  Similarity=0.143  Sum_probs=127.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.+...++.++.+|++|++++..++...     ++|+
T Consensus        15 tGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   89 (254)
T PRK08085         15 TGSAQGIGFLLATGLAEYGAEIIINDITAERAELAV-----AKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDV   89 (254)
T ss_pred             ECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-----HHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865432111     111111245778899999999888877532     5899


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |||++|....                    +    ++.++..+.  +..++|++||.......   +....|..+|...+
T Consensus        90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---~~~~~Y~~sK~a~~  166 (254)
T PRK08085         90 LINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGR---DTITPYAASKGAVK  166 (254)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCC---CCCcchHHHHHHHH
Confidence            9999986311                    1    122333332  45689999986442211   11226888998887


Q ss_pred             HHHHh-------cCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          130 SVLES-------KGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       130 ~~~~~-------~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      .+.+.       +++++..++||.+..+...... ...+........+         ...+...+|++++++.++.... 
T Consensus       167 ~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~~va~~~~~l~~~~~~  237 (254)
T PRK08085        167 MLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTP---------AARWGDPQELIGAAVFLSSKASD  237 (254)
T ss_pred             HHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCcccc
Confidence            77642       5899999999999887321100 1111122221111         1246678999999999997532 


Q ss_pred             -cCCceEEecCCc
Q 021331          201 -ASRQVFNISGEK  212 (314)
Q Consensus       201 -~~~~~~~i~~~~  212 (314)
                       -.|.+..+.++.
T Consensus       238 ~i~G~~i~~dgg~  250 (254)
T PRK08085        238 FVNGHLLFVDGGM  250 (254)
T ss_pred             CCcCCEEEECCCe
Confidence             267788887764

>PRK12743 oxidoreductase; Provisional

Probab=99.52  E-value=3.4e-13  Score=113.61  Aligned_cols=196  Identities=15%  Similarity=0.121  Sum_probs=125.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|+++.++.......+.    ..+.....++.++.+|++|++++..++++.     .+|+
T Consensus         8 tGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (256)
T PRK12743          8 TASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETA----EEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDV   83 (256)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999988765433111111    011112356889999999998887776532     5899


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHh----CC---CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREAD--------------------EVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~----~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||++|....                    +...++++    +.   ...++|++||.......   +....|+.+|...
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~---~~~~~Y~~sK~a~  160 (256)
T PRK12743         84 LVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPL---PGASAYTAAKHAL  160 (256)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCC---CCcchhHHHHHHH
Confidence            9999986321                    12223333    21   13589999996543211   1223688899887


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      +.+++       .++++++.++||.+.++.... ............  .++       ..+.+.+|++.++..++.... 
T Consensus       161 ~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~-~~~~~~~~~~~~--~~~-------~~~~~~~dva~~~~~l~~~~~~  230 (256)
T PRK12743        161 GGLTKAMALELVEHGILVNAVAPGAIATPMNGM-DDSDVKPDSRPG--IPL-------GRPGDTHEIASLVAWLCSEGAS  230 (256)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEEeCCccCccccc-cChHHHHHHHhc--CCC-------CCCCCHHHHHHHHHHHhCcccc
Confidence            77653       357999999999999874211 111111111111  111       124578999999998887532 


Q ss_pred             -cCCceEEecCCcc
Q 021331          201 -ASRQVFNISGEKY  213 (314)
Q Consensus       201 -~~~~~~~i~~~~~  213 (314)
                       ..|.++.+.++..
T Consensus       231 ~~~G~~~~~dgg~~  244 (256)
T PRK12743        231 YTTGQSLIVDGGFM  244 (256)
T ss_pred             CcCCcEEEECCCcc
Confidence             3678888888753

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.52  E-value=1.5e-13  Score=120.03  Aligned_cols=187  Identities=17%  Similarity=0.191  Sum_probs=125.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|+++++++++..     .+|+
T Consensus        14 TGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~-----~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~   88 (334)
T PRK07109         14 TGASAGVGRATARAFARRGAKVVLLARGEEGLEALA-----AEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDT   88 (334)
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence            799999999999999999999999999865422111     122222356888999999999888876532     6899


Q ss_pred             EEEcCCCCcc------------------------cHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~------------------------~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+++....                        .++.++..+.  +..+||++||...+...   |....|..+|...+
T Consensus        89 lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~---~~~~~Y~asK~a~~  165 (334)
T PRK07109         89 WVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSI---PLQSAYCAAKHAIR  165 (334)
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCC---CcchHHHHHHHHHH
Confidence            9999986321                        1334555554  45789999998776432   22236888888766


Q ss_pred             HHHH---------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          130 SVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       130 ~~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.+         ..++.+++++|+.+.+|.     +... ........       .....+...+|+|++++.++.++ 
T Consensus       166 ~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~-----~~~~-~~~~~~~~-------~~~~~~~~pe~vA~~i~~~~~~~-  231 (334)
T PRK07109        166 GFTDSLRCELLHDGSPVSVTMVQPPAVNTPQ-----FDWA-RSRLPVEP-------QPVPPIYQPEVVADAILYAAEHP-  231 (334)
T ss_pred             HHHHHHHHHHhhcCCCeEEEEEeCCCccCch-----hhhh-hhhccccc-------cCCCCCCCHHHHHHHHHHHHhCC-
Confidence            5542         136899999999887662     1111 10011110       11123567899999999999875 


Q ss_pred             cCCceEEecCC
Q 021331          201 ASRQVFNISGE  211 (314)
Q Consensus       201 ~~~~~~~i~~~  211 (314)
                        ...+.+++.
T Consensus       232 --~~~~~vg~~  240 (334)
T PRK07109        232 --RRELWVGGP  240 (334)
T ss_pred             --CcEEEeCcH
Confidence              245666543

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.52  E-value=2.7e-13  Score=113.93  Aligned_cols=190  Identities=17%  Similarity=0.112  Sum_probs=126.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+..   ..          ..++.++.+|+.+++++.+++...     ++|+
T Consensus        12 tGas~gIG~~la~~l~~~g~~v~~~~r~~~~~---~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   78 (252)
T PRK07856         12 TGGTRGIGAGIARAFLAAGATVVVCGRRAPET---VD----------GRPAEFHAADVRDPDQVAALVDAIVERHGRLDV   78 (252)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCChhhh---hc----------CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986541   11          246888999999999888887632     5799


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhC----C---CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA--------------------DEVEPILDAL----P---NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~----~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      |||++|...                    .++..+++.+    .   +..++|++||...+...   +....|..+|...
T Consensus        79 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~---~~~~~Y~~sK~a~  155 (252)
T PRK07856         79 LVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPS---PGTAAYGAAKAGL  155 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCC---CCCchhHHHHHHH
Confidence            999998531                    1122333332    2   23689999997654322   2223688899888


Q ss_pred             HHHHHh----c--CCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          129 ESVLES----K--GVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       129 e~~~~~----~--~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      +.+++.    .  .+.+..++|+.+..+...... .......+....+         ...+...+|+|++++.++.... 
T Consensus       156 ~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~p~~va~~~~~L~~~~~~  226 (252)
T PRK07856        156 LNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVP---------LGRLATPADIAWACLFLASDLAS  226 (252)
T ss_pred             HHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCC---------CCCCcCHHHHHHHHHHHcCcccC
Confidence            887642    1  278888999988776311000 0011111111111         1235578999999999987532 


Q ss_pred             -cCCceEEecCCcccc
Q 021331          201 -ASRQVFNISGEKYVT  215 (314)
Q Consensus       201 -~~~~~~~i~~~~~~s  215 (314)
                       ..|..+.+.++...+
T Consensus       227 ~i~G~~i~vdgg~~~~  242 (252)
T PRK07856        227 YVSGANLEVHGGGERP  242 (252)
T ss_pred             CccCCEEEECCCcchH
Confidence             378889998886544

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.52  E-value=5.9e-13  Score=110.61  Aligned_cols=184  Identities=15%  Similarity=0.170  Sum_probs=121.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-CccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi~~   79 (314)
                      |||+|+||.++++.|+++|++|++++|+....   .           ..++.++.+|+.++  ++++++.. .+|++||+
T Consensus        11 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---~-----------~~~~~~~~~D~~~~--~~~~~~~~~~id~lv~~   74 (235)
T PRK06550         11 TGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---L-----------SGNFHFLQLDLSDD--LEPLFDWVPSVDILCNT   74 (235)
T ss_pred             cCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---c-----------CCcEEEEECChHHH--HHHHHHhhCCCCEEEEC
Confidence            79999999999999999999999999875431   1           14688899999987  44444332 68999999


Q ss_pred             CCCCc---------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHH
Q 021331           80 NGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVL  132 (314)
Q Consensus        80 a~~~~---------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~  132 (314)
                      +|...                     .++.+++++    +.  +..++|++||...+....   ....|+.+|...+.+.
T Consensus        75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---~~~~Y~~sK~a~~~~~  151 (235)
T PRK06550         75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGG---GGAAYTASKHALAGFT  151 (235)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC---CCcccHHHHHHHHHHH
Confidence            98421                     112223333    22  345899999965543221   1225888888766655


Q ss_pred             H-------hcCCceEEEecCeeeCCCCCCchh-HHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC--ccC
Q 021331          133 E-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KAS  202 (314)
Q Consensus       133 ~-------~~~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~--~~~  202 (314)
                      +       .+++++++++|+.+.++.....+. ..+........+         ...+...+|+|++++.++.+.  ...
T Consensus       152 ~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~a~~~~~l~s~~~~~~~  222 (235)
T PRK06550        152 KQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETP---------IKRWAEPEEVAELTLFLASGKADYMQ  222 (235)
T ss_pred             HHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCC---------cCCCCCHHHHHHHHHHHcChhhccCC
Confidence            3       358999999999998874322111 111122221111         123667899999999999753  236


Q ss_pred             CceEEecCCc
Q 021331          203 RQVFNISGEK  212 (314)
Q Consensus       203 ~~~~~i~~~~  212 (314)
                      |.++.+.++.
T Consensus       223 g~~~~~~gg~  232 (235)
T PRK06550        223 GTIVPIDGGW  232 (235)
T ss_pred             CcEEEECCce
Confidence            7788887764

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.52  E-value=1.6e-13  Score=114.49  Aligned_cols=176  Identities=13%  Similarity=0.104  Sum_probs=119.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-----CCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-----~~~d~   75 (314)
                      |||+|++|..+++.|+++|++|++++|+.+......     ..+.+...++.++.+|++|++++..+++.     -++|+
T Consensus        12 tG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (241)
T PRK07454         12 TGASSGIGKATALAFAKAGWDLALVARSQDALEALA-----AELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDV   86 (241)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111     11111225688899999999988777753     25899


Q ss_pred             EEEcCCCCc--------------------cc----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||++|...                    .+    ++.++..+.  +..++|++||...+.....   ...|..+|...+
T Consensus        87 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---~~~Y~~sK~~~~  163 (241)
T PRK07454         87 LINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQ---WGAYCVSKAALA  163 (241)
T ss_pred             EEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCC---ccHHHHHHHHHH
Confidence            999998521                    11    122333333  4578999999877654322   225888898877


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.+       ..+++++++||+.+-.+.....            ....    ......++..+|+|++++.++..+.
T Consensus       164 ~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~------------~~~~----~~~~~~~~~~~~va~~~~~l~~~~~  225 (241)
T PRK07454        164 AFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE------------TVQA----DFDRSAMLSPEQVAQTILHLAQLPP  225 (241)
T ss_pred             HHHHHHHHHhhhhCCEEEEEecCcccCCccccc------------cccc----ccccccCCCHHHHHHHHHHHHcCCc
Confidence            6653       3589999999998876631100            0000    0001235789999999999998764

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.51  E-value=3.4e-13  Score=113.36  Aligned_cols=194  Identities=18%  Similarity=0.174  Sum_probs=125.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        15 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   89 (253)
T PRK05867         15 TGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLA-----DEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDI   89 (253)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865432111     111112346788999999999888877532     6899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHh----CC-C--CCcEEEEeeceeeccCCCCC-ccCccccchhh
Q 021331           76 VYDINGREA--------------------DEVEPILDA----LP-N--LEQFIYCSSAGVYLKSDLLP-HCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~----~~-~--~~~~i~~Ss~~v~~~~~~~~-~~e~~~~~k~~  127 (314)
                      +||++|...                    .+...+.++    +. +  ..++|++||....-.  ..+ ....|+.+|..
T Consensus        90 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--~~~~~~~~Y~asKaa  167 (253)
T PRK05867         90 AVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII--NVPQQVSHYCASKAA  167 (253)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC--CCCCCccchHHHHHH
Confidence            999998631                    112222332    22 1  246889888543211  111 11268999988


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.+.+       ..|+++..++||.+-.+.... . ...........  +       ...+...+|+|++++.+++...
T Consensus       168 l~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~-~-~~~~~~~~~~~--~-------~~r~~~p~~va~~~~~L~s~~~  236 (253)
T PRK05867        168 VIHLTKAMAVELAPHKIRVNSVSPGYILTELVEP-Y-TEYQPLWEPKI--P-------LGRLGRPEELAGLYLYLASEAS  236 (253)
T ss_pred             HHHHHHHHHHHHhHhCeEEEEeecCCCCCccccc-c-hHHHHHHHhcC--C-------CCCCcCHHHHHHHHHHHcCccc
Confidence            877764       257999999999987663211 1 11111121111  1       1236678999999999997532


Q ss_pred             --cCCceEEecCCc
Q 021331          201 --ASRQVFNISGEK  212 (314)
Q Consensus       201 --~~~~~~~i~~~~  212 (314)
                        ..|.++.+.++.
T Consensus       237 ~~~tG~~i~vdgG~  250 (253)
T PRK05867        237 SYMTGSDIVIDGGY  250 (253)
T ss_pred             CCcCCCeEEECCCc
Confidence              367888888875

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.51  E-value=3e-13  Score=113.71  Aligned_cols=195  Identities=16%  Similarity=0.151  Sum_probs=127.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.+++++|+++|++|++++|+.+......     ..+.....++.++.+|++|.+++..+++..     ++|+
T Consensus        13 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   87 (253)
T PRK06172         13 TGGAAGIGRATALAFAREGAKVVVADRDAAGGEETV-----ALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDY   87 (253)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999875532111     112222356889999999998888877633     5799


Q ss_pred             EEEcCCCCcc---------------------cH----HHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREAD---------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~---------------------~~----~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||++|....                     +.    +.++..+.  +..++|++||...+.....   ...|..+|...
T Consensus        88 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~---~~~Y~~sKaa~  164 (253)
T PRK06172         88 AFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPK---MSIYAASKHAV  164 (253)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC---CchhHHHHHHH
Confidence            9999986311                     01    12222232  4468999999776644322   22588889887


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCch--hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      +.+.+       ..++++..++||.|-.+......  ............         ....+...+|+++.++.++.+.
T Consensus       165 ~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~p~~ia~~~~~l~~~~  235 (253)
T PRK06172        165 IGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMH---------PVGRIGKVEEVASAVLYLCSDG  235 (253)
T ss_pred             HHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccC---------CCCCccCHHHHHHHHHHHhCcc
Confidence            77653       24699999999988665311100  011111111111         1123567899999999999763


Q ss_pred             --ccCCceEEecCCc
Q 021331          200 --KASRQVFNISGEK  212 (314)
Q Consensus       200 --~~~~~~~~i~~~~  212 (314)
                        ...|..+.+.++.
T Consensus       236 ~~~~~G~~i~~dgg~  250 (253)
T PRK06172        236 ASFTTGHALMVDGGA  250 (253)
T ss_pred             ccCcCCcEEEECCCc
Confidence              3367888888875

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.51  E-value=9.5e-14  Score=114.30  Aligned_cols=178  Identities=18%  Similarity=0.163  Sum_probs=124.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecCCChhhHHHhhhc-----CCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~-----~~~d   74 (314)
                      ||||+.||..+++.|.++|++|+.+.|+.++.....     +++++. +-.+.++.+|+++++++..+..+     ..+|
T Consensus        12 TGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la-----~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~Id   86 (265)
T COG0300          12 TGASSGIGAELAKQLARRGYNLILVARREDKLEALA-----KELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPID   86 (265)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHH-----HHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCccc
Confidence            899999999999999999999999999998753222     133332 35688999999999888887653     2699


Q ss_pred             EEEEcCCCCccc------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~~~------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      ++||+||....+                        ++.++.-+.  +..++|.++|...+-..   |..-.|+.+|...
T Consensus        87 vLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~---p~~avY~ATKa~v  163 (265)
T COG0300          87 VLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT---PYMAVYSATKAFV  163 (265)
T ss_pred             EEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC---cchHHHHHHHHHH
Confidence            999999984322                        233333333  55689999998766432   3334689999765


Q ss_pred             HHH-------HHhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          129 ESV-------LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       129 e~~-------~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      -.+       ++..|+.++.|.||.+..+...           ..+....   ......-++..+|+|+..+..+.+..
T Consensus       164 ~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-----------~~~~~~~---~~~~~~~~~~~~~va~~~~~~l~~~k  228 (265)
T COG0300         164 LSFSEALREELKGTGVKVTAVCPGPTRTEFFD-----------AKGSDVY---LLSPGELVLSPEDVAEAALKALEKGK  228 (265)
T ss_pred             HHHHHHHHHHhcCCCeEEEEEecCcccccccc-----------ccccccc---cccchhhccCHHHHHHHHHHHHhcCC
Confidence            443       2457899999999987765211           0111100   11123468889999999999998744

>PRK09242 tropinone reductase; Provisional

Probab=99.51  E-value=5.2e-13  Score=112.53  Aligned_cols=195  Identities=17%  Similarity=0.237  Sum_probs=128.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|.||.++++.|.++|++|++++|+.+.......     .+...  ..++.++.+|+++++++..++...     ++
T Consensus        15 tGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   89 (257)
T PRK09242         15 TGASKGIGLAIAREFLGLGADVLIVARDADALAQARD-----ELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGL   89 (257)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            6999999999999999999999999998654321110     11111  246888899999998887776532     58


Q ss_pred             cEEEEcCCCCc--------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           74 DVVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        74 d~vi~~a~~~~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      |++||++|...                    .+...++++    +.  +..++|++||...+.....   ...|..+|..
T Consensus        90 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~---~~~Y~~sK~a  166 (257)
T PRK09242         90 HILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRS---GAPYGMTKAA  166 (257)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCC---CcchHHHHHH
Confidence            99999998621                    112233333    32  4568999999766543222   2258888988


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      .+.+++       ..+++++.++|+.+.++...... ...+........++         .-+...+|++.+++.++...
T Consensus       167 ~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~~~~l~~~~  237 (257)
T PRK09242        167 LLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPM---------RRVGEPEEVAAAVAFLCMPA  237 (257)
T ss_pred             HHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCcc
Confidence            777654       35799999999999887432111 11222222222211         12446799999999998753


Q ss_pred             c--cCCceEEecCCc
Q 021331          200 K--ASRQVFNISGEK  212 (314)
Q Consensus       200 ~--~~~~~~~i~~~~  212 (314)
                      .  ..|+.+.+.++.
T Consensus       238 ~~~~~g~~i~~~gg~  252 (257)
T PRK09242        238 ASYITGQCIAVDGGF  252 (257)
T ss_pred             cccccCCEEEECCCe
Confidence            2  257788887654

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.51  E-value=2.8e-13  Score=114.46  Aligned_cols=193  Identities=12%  Similarity=0.158  Sum_probs=124.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......        ....++.++.+|+.|++++.+++...     .+|+
T Consensus        12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   83 (261)
T PRK08265         12 TGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAA--------SLGERARFIATDITDDAAIERAVATVVARFGRVDI   83 (261)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998654221110        11246889999999999888877642     5899


Q ss_pred             EEEcCCCCc-------------------cc----HHHHHHhC-CCCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           76 VYDINGREA-------------------DE----VEPILDAL-PNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        76 vi~~a~~~~-------------------~~----~~~~~~~~-~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      +||++|...                   .+    ++.++..+ ++..++|++||........   ....|..+|...+.+
T Consensus        84 lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---~~~~Y~asKaa~~~~  160 (261)
T PRK08265         84 LVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQT---GRWLYPASKAAIRQL  160 (261)
T ss_pred             EEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC---CCchhHHHHHHHHHH
Confidence            999998531                   11    12233333 2446899999865432211   122588889887776


Q ss_pred             HH-------hcCCceEEEecCeeeCCCCCCch--hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          132 LE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       132 ~~-------~~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+       .++++++.++||.+..+......  .......... ..       .....+...+|+|++++.+++...  
T Consensus       161 ~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~-~~-------~p~~r~~~p~dva~~~~~l~s~~~~~  232 (261)
T PRK08265        161 TRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAA-PF-------HLLGRVGDPEEVAQVVAFLCSDAASF  232 (261)
T ss_pred             HHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhc-cc-------CCCCCccCHHHHHHHHHHHcCccccC
Confidence            54       25799999999987665211000  0000001100 00       111235678999999999997632  


Q ss_pred             cCCceEEecCCc
Q 021331          201 ASRQVFNISGEK  212 (314)
Q Consensus       201 ~~~~~~~i~~~~  212 (314)
                      ..|..+.+.++.
T Consensus       233 ~tG~~i~vdgg~  244 (261)
T PRK08265        233 VTGADYAVDGGY  244 (261)
T ss_pred             ccCcEEEECCCe
Confidence            367888888875

>PRK06196 oxidoreductase; Provisional

Probab=99.51  E-value=2.8e-13  Score=117.55  Aligned_cols=191  Identities=18%  Similarity=0.118  Sum_probs=120.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-----CCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-----~~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......     .    ..++.++.+|++|.++++++++.     .++|+
T Consensus        32 TGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~-----~----l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         32 TGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALA-----G----IDGVEVVMLDLADLESVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----H----hhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence            7999999999999999999999999998654321111     0    12478899999999988877753     26899


Q ss_pred             EEEcCCCCc------------------cc----HHHHHHhCC--CCCcEEEEeeceeeccC-C------CCCc--cCccc
Q 021331           76 VYDINGREA------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKS-D------LLPH--CESRH  122 (314)
Q Consensus        76 vi~~a~~~~------------------~~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~-~------~~~~--~e~~~  122 (314)
                      +||+||...                  .+    ++.++..+.  +..++|++||.+..... .      ..++  ...|+
T Consensus       103 li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~  182 (315)
T PRK06196        103 LINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYG  182 (315)
T ss_pred             EEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHHHH
Confidence            999998531                  11    233444444  34699999996543211 0      0111  12689


Q ss_pred             cchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHH--HHHHcCCCeecCCCCCceeeeeeHHHHHHHHH
Q 021331          123 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFF--HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  193 (314)
Q Consensus       123 ~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  193 (314)
                      .+|...+.+.+       ..++++++++||.+.++...........  ..+.... .++ .     ..+...+|+|.+++
T Consensus       183 ~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~-~-----~~~~~~~~~a~~~~  255 (315)
T PRK06196        183 QSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHG-NPI-D-----PGFKTPAQGAATQV  255 (315)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhh-hhh-h-----hhcCCHhHHHHHHH
Confidence            99988776652       3579999999999998843211000000  0000000 000 0     02456899999999


Q ss_pred             HHhcCCcc--CCceEE
Q 021331          194 QVLGNEKA--SRQVFN  207 (314)
Q Consensus       194 ~~l~~~~~--~~~~~~  207 (314)
                      .++..+..  .++.|.
T Consensus       256 ~l~~~~~~~~~~g~~~  271 (315)
T PRK06196        256 WAATSPQLAGMGGLYC  271 (315)
T ss_pred             HHhcCCccCCCCCeEe
Confidence            99875432  344444

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.51  E-value=5.7e-13  Score=111.63  Aligned_cols=195  Identities=17%  Similarity=0.171  Sum_probs=120.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||..+++.|+++|++|+++.++.........    ..+.....++.++.+|+.+++++.+++++.     .+|+
T Consensus         8 tGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (248)
T PRK06947          8 TGASRGIGRATAVLAAARGWSVGINYARDAAAAEETA----DAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLDA   83 (248)
T ss_pred             eCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999877644322111110    011112246889999999998888776532     5899


Q ss_pred             EEEcCCCCcc---------------------cHHHHHH----hCC--C---CCcEEEEeecee-eccCCCCCccCccccc
Q 021331           76 VYDINGREAD---------------------EVEPILD----ALP--N---LEQFIYCSSAGV-YLKSDLLPHCESRHKG  124 (314)
Q Consensus        76 vi~~a~~~~~---------------------~~~~~~~----~~~--~---~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~  124 (314)
                      +||++|....                     +...++.    .+.  +   ..+||++||... ++.....   ..|+.+
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~---~~Y~~s  160 (248)
T PRK06947         84 LVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEY---VDYAGS  160 (248)
T ss_pred             EEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCC---cccHhh
Confidence            9999985311                     1112222    221  1   235999998543 4432211   258999


Q ss_pred             hhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          125 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       125 k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      |...+.+.+       ..+++++++|||.+..|.....-..........  ..+.       ..+..++|++++++.++.
T Consensus       161 K~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~--~~~~-------~~~~~~e~va~~~~~l~~  231 (248)
T PRK06947        161 KGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGA--QTPL-------GRAGEADEVAETIVWLLS  231 (248)
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhh--cCCC-------CCCcCHHHHHHHHHHHcC
Confidence            988876653       247999999999998874211001111111111  1111       124568999999999988


Q ss_pred             CCc--cCCceEEecCC
Q 021331          198 NEK--ASRQVFNISGE  211 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~  211 (314)
                      ++.  ..|..+.+.++
T Consensus       232 ~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        232 DAASYVTGALLDVGGG  247 (248)
T ss_pred             ccccCcCCceEeeCCC
Confidence            643  36777777654

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.51  E-value=1e-13  Score=117.28  Aligned_cols=196  Identities=17%  Similarity=0.238  Sum_probs=125.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++..+++..     ++|+
T Consensus        15 tGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~   89 (264)
T PRK07576         15 VGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAV-----AQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDV   89 (264)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999999865422111     111112245678899999999888877642     5799


Q ss_pred             EEEcCCCC--------------------cccHHHHHHhC----C-CCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           76 VYDINGRE--------------------ADEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        76 vi~~a~~~--------------------~~~~~~~~~~~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      +||+++..                    ..++.++++++    . ...++|++||...+..   .+....|..+|...+.
T Consensus        90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~---~~~~~~Y~asK~a~~~  166 (264)
T PRK07576         90 LVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP---MPMQAHVCAAKAGVDM  166 (264)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC---CCCccHHHHHHHHHHH
Confidence            99998742                    12223333332    2 3358999999655322   1222368889988887


Q ss_pred             HHHh-------cCCceEEEecCeeeCCCCCCchhH-HHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          131 VLES-------KGVNWTSLRPVYIYGPLNYNPVEE-WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       131 ~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      +++.       .+++++.++|+.+.+........+ ........ ...+       ...+...+|+|++++.++..+.  
T Consensus       167 l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~dva~~~~~l~~~~~~~  238 (264)
T PRK07576        167 LTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVA-QSVP-------LKRNGTKQDIANAALFLASDMASY  238 (264)
T ss_pred             HHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHH-hcCC-------CCCCCCHHHHHHHHHHHcChhhcC
Confidence            7642       568999999998775321000000 00011100 1111       1235678999999999997632  


Q ss_pred             cCCceEEecCCc
Q 021331          201 ASRQVFNISGEK  212 (314)
Q Consensus       201 ~~~~~~~i~~~~  212 (314)
                      ..|..+.+.++.
T Consensus       239 ~~G~~~~~~gg~  250 (264)
T PRK07576        239 ITGVVLPVDGGW  250 (264)
T ss_pred             ccCCEEEECCCc
Confidence            267788888775

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.51  E-value=1.9e-13  Score=115.05  Aligned_cols=192  Identities=18%  Similarity=0.182  Sum_probs=121.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.........        +  .+..++.+|++|++++.++++..     ++|+
T Consensus        13 tGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~--------~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06057         13 TGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAAD--------E--VGGLFVPTDVTDEDAVNALFDTAAETYGSVDI   82 (255)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--------H--cCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997654221110        0  12357899999999888888642     5899


Q ss_pred             EEEcCCCCcc----------------------c----HHHHHHhCC--CCCcEEEEeec-eeeccCCCCCccCccccchh
Q 021331           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSA-GVYLKSDLLPHCESRHKGKL  126 (314)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~~~~~~~--~~~~~i~~Ss~-~v~~~~~~~~~~e~~~~~k~  126 (314)
                      |||++|....                      +    ++.++..+.  +..++|++||. ++++....   ...|+.+|.
T Consensus        83 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~---~~~Y~~sKa  159 (255)
T PRK06057         83 AFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATS---QISYTASKG  159 (255)
T ss_pred             EEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCC---CcchHHHHH
Confidence            9999985310                      0    122333332  44588988884 45543211   125888886


Q ss_pred             hHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          127 NTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       127 ~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      ..+.+.+       ..++++++++||.+.++.....+. ....... .....++     ...+.+++|+++++..++...
T Consensus       160 al~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~-~~~~~~~-~~~~~~~-----~~~~~~~~~~a~~~~~l~~~~  232 (255)
T PRK06057        160 GVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFA-KDPERAA-RRLVHVP-----MGRFAEPEEIAAAVAFLASDD  232 (255)
T ss_pred             HHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhcc-CCHHHHH-HHHhcCC-----CCCCcCHHHHHHHHHHHhCcc
Confidence            5544432       357999999999998874221110 0000000 0001111     124788999999999888753


Q ss_pred             c--cCCceEEecCCc
Q 021331          200 K--ASRQVFNISGEK  212 (314)
Q Consensus       200 ~--~~~~~~~i~~~~  212 (314)
                      .  ..+..+.+.++.
T Consensus       233 ~~~~~g~~~~~~~g~  247 (255)
T PRK06057        233 ASFITASTFLVDGGI  247 (255)
T ss_pred             ccCccCcEEEECCCe
Confidence            2  357788887653

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.50  E-value=3.4e-13  Score=113.78  Aligned_cols=195  Identities=13%  Similarity=0.166  Sum_probs=128.6

Q ss_pred             CCcccccHHHHHHHHHHCCCe-EEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||..+++.|.++|++ |++++|+.++.....     ..+......+.++.+|+++++++.++++..     ++|
T Consensus        12 tGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   86 (260)
T PRK06198         12 TGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQA-----AELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLD   86 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999998 999998765422110     011111346778999999999888877642     589


Q ss_pred             EEEEcCCCCc--------------------ccHHHHHHh----CC---CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           75 VVYDINGREA--------------------DEVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~~~~~----~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      ++||+++...                    .+..+++++    +.   ...++|++||...++...   ....|+.+|..
T Consensus        87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~---~~~~Y~~sK~a  163 (260)
T PRK06198         87 ALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP---FLAAYCASKGA  163 (260)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC---CcchhHHHHHH
Confidence            9999998632                    112233333    22   135799999987765332   22368999988


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCC---c---hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHH
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYN---P---VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                      .|.+.+       ..++.++.++|+.++++....   .   ....+........         ....+++.+|++++++.
T Consensus       164 ~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~a~~~~~  234 (260)
T PRK06198        164 LATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQ---------PFGRLLDPDEVARAVAF  234 (260)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccC---------CccCCcCHHHHHHHHHH
Confidence            887764       246889999999998874210   0   0011111111111         12346789999999999


Q ss_pred             HhcCCc--cCCceEEecCCc
Q 021331          195 VLGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       195 ~l~~~~--~~~~~~~i~~~~  212 (314)
                      ++.+..  ..|+++.+.++.
T Consensus       235 l~~~~~~~~~G~~~~~~~~~  254 (260)
T PRK06198        235 LLSDESGLMTGSVIDFDQSV  254 (260)
T ss_pred             HcChhhCCccCceEeECCcc
Confidence            987543  367888887765

>PRK08264 short chain dehydrogenase; Validated

Probab=99.50  E-value=3.8e-13  Score=112.02  Aligned_cols=161  Identities=17%  Similarity=0.179  Sum_probs=114.7

Q ss_pred             CCcccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-CccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi~   78 (314)
                      |||+|++|.++++.|+++|+ +|++++|+.+.... .           ..++.++.+|+.|++.+.++++.. .+|+|||
T Consensus        12 tGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~   79 (238)
T PRK08264         12 TGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-L-----------GPRVVPLQLDVTDPASVAAAAEAASDVTILVN   79 (238)
T ss_pred             ECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-c-----------CCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            79999999999999999998 99999998765322 1           257889999999999999888754 4899999


Q ss_pred             cCCC-Cc--------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           79 INGR-EA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        79 ~a~~-~~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      +++. ..                    .+..+++++    +.  +..+||++||...+....   ....|+.+|..++.+
T Consensus        80 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~---~~~~y~~sK~a~~~~  156 (238)
T PRK08264         80 NAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFP---NLGTYSASKAAAWSL  156 (238)
T ss_pred             CCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCC---CchHhHHHHHHHHHH
Confidence            9987 11                    112233343    22  456899999977654322   122588889888766


Q ss_pred             HH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          132 LE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       132 ~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      .+       ..+++++++||+.+.++...             ..      .    ...+..+|+++.++..+..+
T Consensus       157 ~~~l~~~~~~~~i~~~~v~pg~v~t~~~~-------------~~------~----~~~~~~~~~a~~~~~~~~~~  208 (238)
T PRK08264        157 TQALRAELAPQGTRVLGVHPGPIDTDMAA-------------GL------D----APKASPADVARQILDALEAG  208 (238)
T ss_pred             HHHHHHHhhhcCeEEEEEeCCcccccccc-------------cC------C----cCCCCHHHHHHHHHHHHhCC
Confidence            53       24799999999988765210             00      0    01466788888888887753

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.50  E-value=2.6e-13  Score=114.34  Aligned_cols=170  Identities=17%  Similarity=0.210  Sum_probs=116.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......     .+.. ..++.++.+|++|++++.++++..     .+|+
T Consensus         8 tGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          8 TGASSGIGQALAREYARQGATLGLVARRTDALQAFAA-----RLPK-AARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             EcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----hccc-CCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            7999999999999999999999999998654321111     0000 126889999999999888877532     3799


Q ss_pred             EEEcCCCCc---------------------ccHHH----HHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA---------------------DEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~---------------------~~~~~----~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||++|...                     .++..    ++..+.  +..++|++||...+..   .|....|+.+|...
T Consensus        82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~---~~~~~~Y~asK~a~  158 (257)
T PRK07024         82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRG---LPGAGAYSASKAAA  158 (257)
T ss_pred             EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC---CCCCcchHHHHHHH
Confidence            999998531                     11222    333443  4578999998654322   12223689999888


Q ss_pred             HHHH-------HhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          129 ESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       129 e~~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      +.+.       +.++++++++||+.+.++....            .. ..   .    ..++..+|+++.++.++.++
T Consensus       159 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~------------~~-~~---~----~~~~~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        159 IKYLESLRVELRPAGVRVVTIAPGYIRTPMTAH------------NP-YP---M----PFLMDADRFAARAARAIARG  216 (257)
T ss_pred             HHHHHHHHHHhhccCcEEEEEecCCCcCchhhc------------CC-CC---C----CCccCHHHHHHHHHHHHhCC
Confidence            7776       3458999999999998762110            00 00   0    11357899999999999764

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.50  E-value=7.3e-13  Score=111.28  Aligned_cols=195  Identities=15%  Similarity=0.193  Sum_probs=125.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+........     ..+.....++.++.+|++|++++.+++.+.     .+|+
T Consensus         7 tG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (252)
T PRK07677          7 TGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAK-----LEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA   81 (252)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            799999999999999999999999999865422111     111112256889999999999888877542     5899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhC----C--C-CCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA--------------------DEVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~----~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||++|...                    .+..++++++    .  . ..++|++||...+...   +....|..+|...
T Consensus        82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~---~~~~~Y~~sKaa~  158 (252)
T PRK07677         82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG---PGVIHSAAAKAGV  158 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC---CCCcchHHHHHHH
Confidence            999997421                    1122333333    2  2 3589999986544221   1222588888877


Q ss_pred             HHHHH--------hcCCceEEEecCeeeCCCCCCch--hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          129 ESVLE--------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       129 e~~~~--------~~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      +.+.+        .+|+++..++||.+.++.....+  .......+....+  +       ..+...+|+++++..++..
T Consensus       159 ~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~va~~~~~l~~~  229 (252)
T PRK07677        159 LAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVP--L-------GRLGTPEEIAGLAYFLLSD  229 (252)
T ss_pred             HHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCC--C-------CCCCCHHHHHHHHHHHcCc
Confidence            66653        25899999999998854211111  1122222222111  1       2356789999999988875


Q ss_pred             C--ccCCceEEecCCc
Q 021331          199 E--KASRQVFNISGEK  212 (314)
Q Consensus       199 ~--~~~~~~~~i~~~~  212 (314)
                      .  ...|..+.+.++.
T Consensus       230 ~~~~~~g~~~~~~gg~  245 (252)
T PRK07677        230 EAAYINGTCITMDGGQ  245 (252)
T ss_pred             cccccCCCEEEECCCe
Confidence            3  2367788887764

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.50  E-value=1.2e-12  Score=108.75  Aligned_cols=188  Identities=13%  Similarity=0.084  Sum_probs=123.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+++.....+        .  ..++.++.+|+.|++++.++++..     ++|+
T Consensus         8 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   77 (236)
T PRK06483          8 TGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGL--------R--QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRA   77 (236)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH--------H--HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccE
Confidence            799999999999999999999999999865422111        1  134678999999998888777542     4899


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC--C--CCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~--~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      +||++|....                    +    ++.++..+.  +  ..++|++||......   .+....|+.+|..
T Consensus        78 lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~---~~~~~~Y~asKaa  154 (236)
T PRK06483         78 IIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKG---SDKHIAYAASKAA  154 (236)
T ss_pred             EEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccC---CCCCccHHHHHHH
Confidence            9999985211                    0    122333333  2  358999988654321   1222369999998


Q ss_pred             HHHHHHh------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCcc
Q 021331          128 TESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  201 (314)
Q Consensus       128 ~e~~~~~------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~  201 (314)
                      .+.+.+.      .++++..++|+.+..+....   ...........++         .-+...+|+++++..++.....
T Consensus       155 l~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~---~~~~~~~~~~~~~---------~~~~~~~~va~~~~~l~~~~~~  222 (236)
T PRK06483        155 LDNMTLSFAAKLAPEVKVNSIAPALILFNEGDD---AAYRQKALAKSLL---------KIEPGEEEIIDLVDYLLTSCYV  222 (236)
T ss_pred             HHHHHHHHHHHHCCCcEEEEEccCceecCCCCC---HHHHHHHhccCcc---------ccCCCHHHHHHHHHHHhcCCCc
Confidence            8887642      25899999999875432111   1111122221111         1134579999999999975555


Q ss_pred             CCceEEecCCcc
Q 021331          202 SRQVFNISGEKY  213 (314)
Q Consensus       202 ~~~~~~i~~~~~  213 (314)
                      .|.++.+.++..
T Consensus       223 ~G~~i~vdgg~~  234 (236)
T PRK06483        223 TGRSLPVDGGRH  234 (236)
T ss_pred             CCcEEEeCcccc
Confidence            788888887753

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.49  E-value=4.5e-13  Score=112.53  Aligned_cols=195  Identities=12%  Similarity=0.124  Sum_probs=126.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|.+.|++|++++|+........     +.+.+....+.++.+|+.+.+++..+++..     ++|+
T Consensus        14 tGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   88 (252)
T PRK07035         14 TGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVA-----DAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDI   88 (252)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999765422111     111222245778999999998888776532     5899


Q ss_pred             EEEcCCCCc---------------------ccH----HHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA---------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~---------------------~~~----~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+++...                     .+.    +.++..+.  +..++|++||...+...   +....|+.+|..+
T Consensus        89 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---~~~~~Y~~sK~al  165 (252)
T PRK07035         89 LVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPG---DFQGIYSITKAAV  165 (252)
T ss_pred             EEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCC---CCCcchHHHHHHH
Confidence            999998521                     111    22333333  45689999986443221   2223689999998


Q ss_pred             HHHHHh-------cCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          129 ESVLES-------KGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       129 e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      +.+++.       .|++++.++||.+-.+...... ............+         ...+...+|+|++++.++.+..
T Consensus       166 ~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~~~  236 (252)
T PRK07035        166 ISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIP---------LRRHAEPSEMAGAVLYLASDAS  236 (252)
T ss_pred             HHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCC---------CCCcCCHHHHHHHHHHHhCccc
Confidence            887643       4799999999988665311100 0111111211111         1235678999999999997642


Q ss_pred             --cCCceEEecCCc
Q 021331          201 --ASRQVFNISGEK  212 (314)
Q Consensus       201 --~~~~~~~i~~~~  212 (314)
                        ..|.++.+.++.
T Consensus       237 ~~~~g~~~~~dgg~  250 (252)
T PRK07035        237 SYTTGECLNVDGGY  250 (252)
T ss_pred             cCccCCEEEeCCCc
Confidence              367788887653

>TIGR02415 23BDH acetoin reductases

Probab=99.49  E-value=2e-13  Score=114.76  Aligned_cols=198  Identities=19%  Similarity=0.196  Sum_probs=123.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|++.|++|+++.|+........     +.+.....++.++.+|++|++++.+++.+.     .+|+
T Consensus         6 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         6 TGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETA-----KEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998754321111     111122356888999999999888877532     5799


Q ss_pred             EEEcCCCCcc--------------------cH----HHHHHhCC---CCCcEEEEeecee-eccCCCCCccCccccchhh
Q 021331           76 VYDINGREAD--------------------EV----EPILDALP---NLEQFIYCSSAGV-YLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~~~~~~~---~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~k~~  127 (314)
                      |||+++....                    +.    +.++..+.   ...++|++||... ++.+.    ...|..+|..
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~Y~~sK~a  156 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPI----LSAYSSTKFA  156 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCC----CcchHHHHHH
Confidence            9999986321                    01    12333333   2368999998544 33222    2258888988


Q ss_pred             HHHHHHh-------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeec------CCCCCceeeeeeHHHHHHHHHH
Q 021331          128 TESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI------PGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       128 ~e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                      .+.+++.       .++.+++++|+.+..+..     ..+..........++      +........+.+.+|+++++..
T Consensus       157 ~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  231 (254)
T TIGR02415       157 VRGLTQTAAQELAPKGITVNAYCPGIVKTPMW-----EEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSF  231 (254)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEecCcccChhh-----hhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHh
Confidence            8777642       378999999998866521     111110000000000      0000011236788999999999


Q ss_pred             HhcCCc--cCCceEEecCCc
Q 021331          195 VLGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       195 ~l~~~~--~~~~~~~i~~~~  212 (314)
                      +++++.  ..|..+.+.++.
T Consensus       232 l~~~~~~~~~g~~~~~d~g~  251 (254)
T TIGR02415       232 LASEDSDYITGQSILVDGGM  251 (254)
T ss_pred             hcccccCCccCcEEEecCCc
Confidence            998743  246677776653

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.49  E-value=5.4e-13  Score=106.87  Aligned_cols=178  Identities=16%  Similarity=0.132  Sum_probs=119.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhh----cC-CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----AK-GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~----~~-~~d~   75 (314)
                      ||||+.+|.++++.|.+.|++|++..|+.+.......     ++..  ..+.....|++|.+++..++.    ++ ++|+
T Consensus        12 TGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~-----~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221          12 TGASSGIGEATARALAEAGAKVVLAARREERLEALAD-----EIGA--GAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             ecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHH-----hhcc--CceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            7999999999999999999999999999887432221     1110  368889999999988655553    33 5999


Q ss_pred             EEEcCCCCc--------------------cc----HHHHHHhCC--CCCcEEEEeecee-eccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~--------------------~~----~~~~~~~~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||...                    .+    ++.++-.|.  +..++|.+||... |.-+.    ...|+.+|+.+
T Consensus        85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~----~~vY~ATK~aV  160 (246)
T COG4221          85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPG----GAVYGATKAAV  160 (246)
T ss_pred             EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCC----CccchhhHHHH
Confidence            999999732                    22    333444443  4569999999653 22112    12589999888


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCC-Cchh--HHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNY-NPVE--EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      ..+..       ..+++++.+-||.+-..... -++-  ..-.....            ....++..+|+|++++.+++.
T Consensus       161 ~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y------------~~~~~l~p~dIA~~V~~~~~~  228 (246)
T COG4221         161 RAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVY------------KGGTALTPEDIAEAVLFAATQ  228 (246)
T ss_pred             HHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHh------------ccCCCCCHHHHHHHHHHHHhC
Confidence            77642       25799999999987543100 0000  00001000            113577899999999999998


Q ss_pred             Ccc
Q 021331          199 EKA  201 (314)
Q Consensus       199 ~~~  201 (314)
                      |..
T Consensus       229 P~~  231 (246)
T COG4221         229 PQH  231 (246)
T ss_pred             CCc
Confidence            764

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.49  E-value=5.4e-13  Score=111.23  Aligned_cols=167  Identities=19%  Similarity=0.182  Sum_probs=116.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC--CccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~--~~d~vi~   78 (314)
                      |||+|++|.+++++|+++|++|++++|+.+....         +.+...++.++.+|++|++++.++++..  .+|.+||
T Consensus         7 tGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~   77 (240)
T PRK06101          7 TGATSGIGKQLALDYAKQGWQVIACGRNQSVLDE---------LHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF   77 (240)
T ss_pred             EcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH---------HHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence            7999999999999999999999999998654221         1111246888999999999999998753  3789998


Q ss_pred             cCCCC--------------------cccHHHHHHhC----CCCCcEEEEeece-eeccCCCCCccCccccchhhHHHHHH
Q 021331           79 INGRE--------------------ADEVEPILDAL----PNLEQFIYCSSAG-VYLKSDLLPHCESRHKGKLNTESVLE  133 (314)
Q Consensus        79 ~a~~~--------------------~~~~~~~~~~~----~~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~k~~~e~~~~  133 (314)
                      ++|..                    ..++.++++++    .+..++|++||.. .++.    +....|+.+|...+.+.+
T Consensus        78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~  153 (240)
T PRK06101         78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELAL----PRAEAYGASKAAVAYFAR  153 (240)
T ss_pred             cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCC----CCCchhhHHHHHHHHHHH
Confidence            88742                    11123344433    2345789888843 3332    223368999988887753


Q ss_pred             -------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          134 -------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       134 -------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                             .++++++++||+.++++....             .....       ..++..+|+|+.++..++.+.
T Consensus       154 ~l~~e~~~~gi~v~~v~pg~i~t~~~~~-------------~~~~~-------~~~~~~~~~a~~i~~~i~~~~  207 (240)
T PRK06101        154 TLQLDLRPKGIEVVTVFPGFVATPLTDK-------------NTFAM-------PMIITVEQASQEIRAQLARGK  207 (240)
T ss_pred             HHHHHHHhcCceEEEEeCCcCCCCCcCC-------------CCCCC-------CcccCHHHHHHHHHHHHhcCC
Confidence                   468999999999998873211             00000       124678999999999998753

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.49  E-value=1.2e-12  Score=110.00  Aligned_cols=193  Identities=14%  Similarity=0.120  Sum_probs=126.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|.||.++++.|+++|++|++++|+.....       ...+.....++.++.+|++|++++.+++++.     ++|+
T Consensus        14 tGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~   86 (251)
T PRK12481         14 TGCNTGLGQGMAIGLAKAGADIVGVGVAEAPET-------QAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI   86 (251)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEecCchHHHH-------HHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999887643211       0111222356888999999999988887642     5899


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC--C-CCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||++|....                    +    ++.++..+.  + ..++|++||...+.....   ...|+.+|...
T Consensus        87 lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~---~~~Y~asK~a~  163 (251)
T PRK12481         87 LINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIR---VPSYTASKSAV  163 (251)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCC---CcchHHHHHHH
Confidence            9999986321                    1    222333332  2 368999999766543222   23689999888


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC-
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE-  199 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~-  199 (314)
                      +.+.+       .+|+++..++||.+-.+...... .......+...  ++.       ..+...+|+|++++.++... 
T Consensus       164 ~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~p~-------~~~~~peeva~~~~~L~s~~~  234 (251)
T PRK12481        164 MGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILER--IPA-------SRWGTPDDLAGPAIFLSSSAS  234 (251)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhc--CCC-------CCCcCHHHHHHHHHHHhCccc
Confidence            77663       36899999999988665211100 00111111111  111       23567899999999999752 


Q ss_pred             -ccCCceEEecCCc
Q 021331          200 -KASRQVFNISGEK  212 (314)
Q Consensus       200 -~~~~~~~~i~~~~  212 (314)
                       ...|..+.+.++.
T Consensus       235 ~~~~G~~i~vdgg~  248 (251)
T PRK12481        235 DYVTGYTLAVDGGW  248 (251)
T ss_pred             cCcCCceEEECCCE
Confidence             2367788887763

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.49  E-value=7.2e-13  Score=110.55  Aligned_cols=195  Identities=20%  Similarity=0.271  Sum_probs=123.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|.++++.|+++|++|+++.|+.........    ........++.++.+|+.|++++.++++..     .+|+
T Consensus         6 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (242)
T TIGR01829         6 TGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWL----QEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPIDV   81 (242)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Confidence            7999999999999999999999999883322111000    011111246889999999998887776532     5899


Q ss_pred             EEEcCCCCc--------------------cc----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |||++|...                    .+    ++.++..+.  +..++|++||.......   +....|..+|...+
T Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~---~~~~~y~~sk~a~~  158 (242)
T TIGR01829        82 LVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ---FGQTNYSAAKAGMI  158 (242)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC---CCcchhHHHHHHHH
Confidence            999998531                    11    122344443  55689999986443221   11225888887655


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       ..+++++.++|+.+.++... .+...+........+.         ..+...+|+++++..++.++.  
T Consensus       159 ~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~l~~~~~~~  228 (242)
T TIGR01829       159 GFTKALAQEGATKGVTVNTISPGYIATDMVM-AMREDVLNSIVAQIPV---------GRLGRPEEIAAAVAFLASEEAGY  228 (242)
T ss_pred             HHHHHHHHHhhhhCeEEEEEeeCCCcCcccc-ccchHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHcCchhcC
Confidence            5442       35899999999999887422 1222222222222111         124457899999988876532  


Q ss_pred             cCCceEEecCCc
Q 021331          201 ASRQVFNISGEK  212 (314)
Q Consensus       201 ~~~~~~~i~~~~  212 (314)
                      ..|+.+.+.++.
T Consensus       229 ~~G~~~~~~gg~  240 (242)
T TIGR01829       229 ITGATLSINGGL  240 (242)
T ss_pred             ccCCEEEecCCc
Confidence            367889888874

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.49  E-value=1e-12  Score=109.92  Aligned_cols=194  Identities=19%  Similarity=0.259  Sum_probs=123.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcc-cccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++..+.... ....+     ..+......+..+.+|+.|.+++..++++.     ++|
T Consensus         9 tG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   83 (246)
T PRK12938          9 TGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWL-----EDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEID   83 (246)
T ss_pred             ECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999998886543222 11101     011112345777899999998888777532     689


Q ss_pred             EEEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +|||++|....                    +    ++.++..+.  +..++|++||.......   +....|..+|...
T Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---~~~~~y~~sK~a~  160 (246)
T PRK12938         84 VLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ---FGQTNYSTAKAGI  160 (246)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCC---CCChhHHHHHHHH
Confidence            99999986321                    1    233444443  45689999996443211   1222588888866


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC--
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--  199 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~--  199 (314)
                      +.+.+       ..+++++.++|+.+.+|.... ..+.....+....+         ...+...+|++.++..++..+  
T Consensus       161 ~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~v~~~~~~l~~~~~~  230 (246)
T PRK12938        161 HGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA-IRPDVLEKIVATIP---------VRRLGSPDEIGSIVAWLASEESG  230 (246)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEEecccCCchhhh-cChHHHHHHHhcCC---------ccCCcCHHHHHHHHHHHcCcccC
Confidence            65542       357999999999988874221 11222222222211         123556899999999988753  


Q ss_pred             ccCCceEEecCCc
Q 021331          200 KASRQVFNISGEK  212 (314)
Q Consensus       200 ~~~~~~~~i~~~~  212 (314)
                      ...+..+.+.++.
T Consensus       231 ~~~g~~~~~~~g~  243 (246)
T PRK12938        231 FSTGADFSLNGGL  243 (246)
T ss_pred             CccCcEEEECCcc
Confidence            2367788887663

>PRK08589 short chain dehydrogenase; Validated

Probab=99.48  E-value=7.2e-13  Score=112.59  Aligned_cols=198  Identities=17%  Similarity=0.149  Sum_probs=126.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+ +......     .++.+...++.++.+|+++++++..+++..     .+|+
T Consensus        12 tGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   85 (272)
T PRK08589         12 TGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETV-----DKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDV   85 (272)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHH-----HHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCE
Confidence            7999999999999999999999999998 4322111     112222346889999999998888777532     4899


Q ss_pred             EEEcCCCCcc-c------------------------HHHHHHhCC-CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD-E------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~-~------------------------~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||.... .                        ++.++..+. ...++|++||...+...   +....|..+|...+
T Consensus        86 li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asKaal~  162 (272)
T PRK08589         86 LFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAAD---LYRSGYNAAKGAVI  162 (272)
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCC---CCCchHHHHHHHHH
Confidence            9999986321 0                        122333333 33689999997655322   22236899998887


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCch---hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      .+.+       ..|++++.+.||.|..+......   ...+............     ....+...+|+|++++.++...
T Consensus       163 ~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~va~~~~~l~s~~  237 (272)
T PRK08589        163 NFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMT-----PLGRLGKPEEVAKLVVFLASDD  237 (272)
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccC-----CCCCCcCHHHHHHHHHHHcCch
Confidence            7764       35799999999998766321100   0000000100000000     1123567899999999998753


Q ss_pred             --ccCCceEEecCCc
Q 021331          200 --KASRQVFNISGEK  212 (314)
Q Consensus       200 --~~~~~~~~i~~~~  212 (314)
                        ...|..+.+.++.
T Consensus       238 ~~~~~G~~i~vdgg~  252 (272)
T PRK08589        238 SSFITGETIRIDGGV  252 (272)
T ss_pred             hcCcCCCEEEECCCc
Confidence              2367788887775

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.48  E-value=1.7e-12  Score=109.83  Aligned_cols=194  Identities=15%  Similarity=0.167  Sum_probs=126.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-----CCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-----~~~d~   75 (314)
                      |||+|+||.+++++|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.+++.+     -.+|+
T Consensus        16 tGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   90 (265)
T PRK07097         16 TGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGL-----AAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDI   90 (265)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            799999999999999999999999988765432111     11111124688899999999998888864     24899


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeece-eeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAG-VYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||++|....                    +    .+.++..+.  +..+||++||.. .++...    ...|+.+|...
T Consensus        91 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----~~~Y~~sKaal  166 (265)
T PRK07097         91 LVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRET----VSAYAAAKGGL  166 (265)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCC----CccHHHHHHHH
Confidence            9999986321                    1    122333333  456899999853 333222    22588889887


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCch-------hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHH
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                      +.+.+       ..++.++.++||.+..+......       ...+...+....         ....+...+|+|.+++.
T Consensus       167 ~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~  237 (265)
T PRK07097        167 KMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKT---------PAARWGDPEDLAGPAVF  237 (265)
T ss_pred             HHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcC---------CccCCcCHHHHHHHHHH
Confidence            77664       35899999999999887321100       000111111111         11235668999999999


Q ss_pred             HhcCC--ccCCceEEecCCc
Q 021331          195 VLGNE--KASRQVFNISGEK  212 (314)
Q Consensus       195 ~l~~~--~~~~~~~~i~~~~  212 (314)
                      ++...  ...|..+.+.++.
T Consensus       238 l~~~~~~~~~g~~~~~~gg~  257 (265)
T PRK07097        238 LASDASNFVNGHILYVDGGI  257 (265)
T ss_pred             HhCcccCCCCCCEEEECCCc
Confidence            99863  2367788887764

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.48  E-value=4.5e-13  Score=114.00  Aligned_cols=136  Identities=18%  Similarity=0.147  Sum_probs=97.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|.++++.|+++|++|++++|+........           ..++.++.+|+.|++++.++++..     ++|+
T Consensus         7 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   75 (274)
T PRK05693          7 TGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA-----------AAGFTAVQLDVNDGAALARLAEELEAEHGGLDV   75 (274)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865422111           135778899999999888877543     6899


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHh----CC-CCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           76 VYDINGREAD--------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      |||++|....                    ++..+++.    +. +..++|++||...+..   .+....|..+|...+.
T Consensus        76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~---~~~~~~Y~~sK~al~~  152 (274)
T PRK05693         76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLV---TPFAGAYCASKAAVHA  152 (274)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCC---CCCccHHHHHHHHHHH
Confidence            9999986321                    12223333    33 4467899988554322   2223368888987776


Q ss_pred             HHH-------hcCCceEEEecCeeeCC
Q 021331          131 VLE-------SKGVNWTSLRPVYIYGP  150 (314)
Q Consensus       131 ~~~-------~~~~~~~ilR~~~v~g~  150 (314)
                      +.+       .+|+++++++||.+..+
T Consensus       153 ~~~~l~~e~~~~gi~v~~v~pg~v~t~  179 (274)
T PRK05693        153 LSDALRLELAPFGVQVMEVQPGAIASQ  179 (274)
T ss_pred             HHHHHHHHhhhhCeEEEEEecCccccc
Confidence            642       36899999999999765

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.47  E-value=1e-12  Score=111.34  Aligned_cols=188  Identities=16%  Similarity=0.124  Sum_probs=122.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.....              ..++.++.+|++|++++.++++..     .+|+
T Consensus        15 tG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (266)
T PRK06171         15 TGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--------------HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDG   80 (266)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--------------cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998765421              146788999999999888877642     5899


Q ss_pred             EEEcCCCCcc-----------------------------cHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCc
Q 021331           76 VYDINGREAD-----------------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCES  120 (314)
Q Consensus        76 vi~~a~~~~~-----------------------------~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~  120 (314)
                      +||++|....                             +...++++    +.  +..++|++||...+.....   ...
T Consensus        81 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---~~~  157 (266)
T PRK06171         81 LVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEG---QSC  157 (266)
T ss_pred             EEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC---Cch
Confidence            9999985311                             11222222    22  3357999999765432221   225


Q ss_pred             cccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchh------------HHHHHHHHcCCCeecCCCCCceee
Q 021331          121 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE------------EWFFHRLKAGRPIPIPGSGIQVTQ  181 (314)
Q Consensus       121 ~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~  181 (314)
                      |..+|...+.+.+       .+++++.+++||.+-.........            ..+..........+       ...
T Consensus       158 Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r  230 (266)
T PRK06171        158 YAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIP-------LGR  230 (266)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhccccccc-------CCC
Confidence            8888888777653       357999999999875221111000            01111111100111       123


Q ss_pred             eeeHHHHHHHHHHHhcCCc--cCCceEEecCCc
Q 021331          182 LGHVKDLARAFVQVLGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       182 ~i~~~D~a~~~~~~l~~~~--~~~~~~~i~~~~  212 (314)
                      +...+|+|.++..++....  ..|.++++.++.
T Consensus       231 ~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~  263 (266)
T PRK06171        231 SGKLSEVADLVCYLLSDRASYITGVTTNIAGGK  263 (266)
T ss_pred             CCCHHHhhhheeeeeccccccceeeEEEecCcc
Confidence            5678999999999987532  267788887764

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.47  E-value=1.1e-12  Score=109.53  Aligned_cols=190  Identities=17%  Similarity=0.209  Sum_probs=121.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-----CCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-----~~~d~   75 (314)
                      |||+|++|.++++.|+++|+.|++.+|+.+.......        ....++.++.+|++|.+++..++++     -++|+
T Consensus        12 tGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936         12 TGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAA--------ELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH--------HhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999998888877654321110        1124688899999999988887653     15899


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHh----C--CCCCcEEEEeece-eeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREAD--------------------EVEPILDA----L--PNLEQFIYCSSAG-VYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~----~--~~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      |||++|....                    +...++++    +  ++..+||++||.. .++....    ..|+.+|...
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----~~Y~~sk~a~  159 (245)
T PRK12936         84 LVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQ----ANYCASKAGM  159 (245)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCC----cchHHHHHHH
Confidence            9999986321                    12223333    2  1456899999964 4443322    2578888755


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      +.+.+       ..++++++++|+.+..+.... ...........  ..       ....+.+.+|+++++..++.... 
T Consensus       160 ~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~-~~~~~~~~~~~--~~-------~~~~~~~~~~ia~~~~~l~~~~~~  229 (245)
T PRK12936        160 IGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK-LNDKQKEAIMG--AI-------PMKRMGTGAEVASAVAYLASSEAA  229 (245)
T ss_pred             HHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc-cChHHHHHHhc--CC-------CCCCCcCHHHHHHHHHHHcCcccc
Confidence            44432       357999999999876542211 11111111111  11       11235568999999998886532 


Q ss_pred             -cCCceEEecCCc
Q 021331          201 -ASRQVFNISGEK  212 (314)
Q Consensus       201 -~~~~~~~i~~~~  212 (314)
                       ..|+++++.++.
T Consensus       230 ~~~G~~~~~~~g~  242 (245)
T PRK12936        230 YVTGQTIHVNGGM  242 (245)
T ss_pred             CcCCCEEEECCCc
Confidence             257899998874

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.47  E-value=1.1e-12  Score=110.98  Aligned_cols=195  Identities=15%  Similarity=0.164  Sum_probs=124.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.... ...     ..+.....++.++.+|+.+++++..++++.     .+|+
T Consensus        12 tG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~-~~~-----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   85 (263)
T PRK08226         12 TGALQGIGEGIARVFARHGANLILLDISPEIE-KLA-----DELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDI   85 (263)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEecCCHHHH-HHH-----HHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999875321 100     011111246788999999999888877642     6899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||++|...                    .+...++++    +.  +..++|++||....  ....+....|+.+|...+
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~--~~~~~~~~~Y~~sK~a~~  163 (263)
T PRK08226         86 LVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGD--MVADPGETAYALTKAAIV  163 (263)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhc--ccCCCCcchHHHHHHHHH
Confidence            999998621                    112223333    22  34689999985431  111122235888898777


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCC------c-hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHH
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYN------P-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  195 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  195 (314)
                      .+.+       ..+++++.++||.+.++....      + ........+....+         ...+...+|+|+++..+
T Consensus       164 ~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~~va~~~~~l  234 (263)
T PRK08226        164 GLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIP---------LRRLADPLEVGELAAFL  234 (263)
T ss_pred             HHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCC---------CCCCCCHHHHHHHHHHH
Confidence            7664       247899999999988762110      0 01112222222111         12356789999999988


Q ss_pred             hcCC--ccCCceEEecCCc
Q 021331          196 LGNE--KASRQVFNISGEK  212 (314)
Q Consensus       196 l~~~--~~~~~~~~i~~~~  212 (314)
                      +...  ...|.++.+.++.
T Consensus       235 ~~~~~~~~~g~~i~~dgg~  253 (263)
T PRK08226        235 ASDESSYLTGTQNVIDGGS  253 (263)
T ss_pred             cCchhcCCcCceEeECCCc
Confidence            8653  3367788887774

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.46  E-value=1.5e-12  Score=110.30  Aligned_cols=197  Identities=20%  Similarity=0.225  Sum_probs=125.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+||.++++.|+++|++|++++|+.++......     .+.+.  ..++.++.+|++|++++.++++..     .+
T Consensus        14 tGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   88 (265)
T PRK07062         14 TGGSSGIGLATVELLLEAGASVAICGRDEERLASAEA-----RLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGV   88 (265)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----HHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999999999998754321110     11111  135778899999999888776532     58


Q ss_pred             cEEEEcCCCCcc------------------------cHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           74 DVVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      |++||+||....                        .++.++..+.  +..++|++||...+...   |....|..+|..
T Consensus        89 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~y~asKaa  165 (265)
T PRK07062         89 DMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPE---PHMVATSAARAG  165 (265)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCC---CCchHhHHHHHH
Confidence            999999986311                        1233444444  35689999997654322   222257777776


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCch---------hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHH
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  191 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  191 (314)
                      .+.+.+       ..|++++.++||.+..+.....+         +............++       ...+...+|+|++
T Consensus       166 l~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r~~~p~~va~~  238 (265)
T PRK07062        166 LLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIP-------LGRLGRPDEAARA  238 (265)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCC-------cCCCCCHHHHHHH
Confidence            655542       36899999999988765311100         000001110001111       1236678999999


Q ss_pred             HHHHhcCC--ccCCceEEecCCc
Q 021331          192 FVQVLGNE--KASRQVFNISGEK  212 (314)
Q Consensus       192 ~~~~l~~~--~~~~~~~~i~~~~  212 (314)
                      ++.++...  ...|.++.+.++.
T Consensus       239 ~~~L~s~~~~~~tG~~i~vdgg~  261 (265)
T PRK07062        239 LFFLASPLSSYTTGSHIDVSGGF  261 (265)
T ss_pred             HHHHhCchhcccccceEEEcCce
Confidence            99988752  2367888888774

>PRK12742 oxidoreductase; Provisional

Probab=99.46  E-value=3.4e-12  Score=106.16  Aligned_cols=190  Identities=17%  Similarity=0.197  Sum_probs=121.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-CccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi~~   79 (314)
                      |||+|+||.++++.|+++|++|+++.++.......+.       .  ..++.++.+|++|.+++.+++.+. ++|++||+
T Consensus        12 tGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~-------~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~   82 (237)
T PRK12742         12 LGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLA-------Q--ETGATAVQTDSADRDAVIDVVRKSGALDILVVN   82 (237)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHH-------H--HhCCeEEecCCCCHHHHHHHHHHhCCCcEEEEC
Confidence            7999999999999999999999887664322111110       0  124667889999998888887644 48999999


Q ss_pred             CCCCcc--------------------cH----HHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHH--
Q 021331           80 NGREAD--------------------EV----EPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLE--  133 (314)
Q Consensus        80 a~~~~~--------------------~~----~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~--  133 (314)
                      +|....                    +.    +.++..+....++|++||......  ..+....|+.+|...+.+++  
T Consensus        83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~~Y~~sKaa~~~~~~~l  160 (237)
T PRK12742         83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRM--PVAGMAAYAASKSALQGMARGL  160 (237)
T ss_pred             CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccC--CCCCCcchHHhHHHHHHHHHHH
Confidence            986321                    11    122222334468999999654211  11222368999998887764  


Q ss_pred             -----hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cCCceE
Q 021331          134 -----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVF  206 (314)
Q Consensus       134 -----~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~~~~~  206 (314)
                           ..++.+++++||.+..+..... .. .........  ++       ..+...+|+++++..+++...  ..|..+
T Consensus       161 a~~~~~~gi~v~~v~Pg~~~t~~~~~~-~~-~~~~~~~~~--~~-------~~~~~p~~~a~~~~~l~s~~~~~~~G~~~  229 (237)
T PRK12742        161 ARDFGPRGITINVVQPGPIDTDANPAN-GP-MKDMMHSFM--AI-------KRHGRPEEVAGMVAWLAGPEASFVTGAMH  229 (237)
T ss_pred             HHHHhhhCeEEEEEecCcccCCccccc-cH-HHHHHHhcC--CC-------CCCCCHHHHHHHHHHHcCcccCcccCCEE
Confidence                 3579999999999877642211 01 111111111  11       135678999999999987632  267788


Q ss_pred             EecCCc
Q 021331          207 NISGEK  212 (314)
Q Consensus       207 ~i~~~~  212 (314)
                      .+.++.
T Consensus       230 ~~dgg~  235 (237)
T PRK12742        230 TIDGAF  235 (237)
T ss_pred             EeCCCc
Confidence            877653

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.45  E-value=2.8e-12  Score=106.79  Aligned_cols=192  Identities=16%  Similarity=0.159  Sum_probs=122.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|.++|++|++++|+.+.......    ..+.+...++.++.+|+.|++++..+++..     .+|+
T Consensus         4 tGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~   79 (239)
T TIGR01831         4 TGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVV----SAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYG   79 (239)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999998876533211111    122222356889999999999888776531     5799


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhC-------CCCCcEEEEeece-eeccCCCCCccCccccchhh
Q 021331           76 VYDINGREA--------------------DEVEPILDAL-------PNLEQFIYCSSAG-VYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~-------~~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~k~~  127 (314)
                      +||++|...                    .++.++++++       .+..++|++||.. .++...    ...|..+|..
T Consensus        80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~----~~~Y~~sK~a  155 (239)
T TIGR01831        80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRG----QVNYSAAKAG  155 (239)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCC----CcchHHHHHH
Confidence            999988521                    1223344432       1446899999954 444322    2258888887


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.+.+       ..+++++.++|+.+.++.... ... .........+  +       ..+...+|++++++.++..+.
T Consensus       156 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~-~~~~~~~~~~--~-------~~~~~~~~va~~~~~l~~~~~  224 (239)
T TIGR01831       156 LIGATKALAVELAKRKITVNCIAPGLIDTEMLAE-VEH-DLDEALKTVP--M-------NRMGQPAEVASLAGFLMSDGA  224 (239)
T ss_pred             HHHHHHHHHHHHhHhCeEEEEEEEccCccccchh-hhH-HHHHHHhcCC--C-------CCCCCHHHHHHHHHHHcCchh
Confidence            655542       357999999999988763221 111 1111211111  1       124567999999999998632


Q ss_pred             --cCCceEEecCC
Q 021331          201 --ASRQVFNISGE  211 (314)
Q Consensus       201 --~~~~~~~i~~~  211 (314)
                        ..|....+.++
T Consensus       225 ~~~~g~~~~~~gg  237 (239)
T TIGR01831       225 SYVTRQVISVNGG  237 (239)
T ss_pred             cCccCCEEEecCC
Confidence              25666666654

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.45  E-value=1.2e-12  Score=110.05  Aligned_cols=171  Identities=19%  Similarity=0.151  Sum_probs=114.7

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcc-cccCCCCCCchhhhhcc-CceEEEEecCCChhhHHHhhhc----CCc
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP-IAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSA----KGF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~l~~~~~~----~~~   73 (314)
                      |||+|++|.+++++|+++| ++|++++|+.+. .....     +++...+ .++.++.+|+.|++++.++++.    -++
T Consensus        14 tGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~-----~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~i   88 (253)
T PRK07904         14 LGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAV-----AQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGDV   88 (253)
T ss_pred             EcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHH-----HHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Confidence            7999999999999999995 999999998764 21111     1111111 3688999999998876655542    269


Q ss_pred             cEEEEcCCCCccc------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           74 DVVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        74 d~vi~~a~~~~~~------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      |++||++|.....                        ++.+++.+.  +..++|++||...+...   +....|+.+|..
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~---~~~~~Y~~sKaa  165 (253)
T PRK07904         89 DVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVR---RSNFVYGSTKAG  165 (253)
T ss_pred             CEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCC---CCCcchHHHHHH
Confidence            9999988763110                        123455554  56799999997543221   112258888877


Q ss_pred             HHHH-------HHhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          128 TESV-------LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       128 ~e~~-------~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      ...+       ++.+++++++++||.+..+...            ....     .    ...+..+|+|+.++..+.++.
T Consensus       166 ~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~------------~~~~-----~----~~~~~~~~~A~~i~~~~~~~~  224 (253)
T PRK07904        166 LDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA------------HAKE-----A----PLTVDKEDVAKLAVTAVAKGK  224 (253)
T ss_pred             HHHHHHHHHHHHhhcCCEEEEEeeCceecchhc------------cCCC-----C----CCCCCHHHHHHHHHHHHHcCC
Confidence            6544       3456899999999998875210            0000     0    124678999999999998754

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.45  E-value=4.7e-12  Score=107.02  Aligned_cols=194  Identities=13%  Similarity=0.135  Sum_probs=125.0

Q ss_pred             CCccc-ccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh-cc-CceEEEEecCCChhhHHHhhhcC-----C
Q 021331            1 MGGTR-FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FS-SKILHLKGDRKDYDFVKSSLSAK-----G   72 (314)
Q Consensus         1 tGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~D~~d~~~l~~~~~~~-----~   72 (314)
                      |||+| .||.++++.|+++|++|++++|+.........     .+.+ .. .++.++.+|+.+++++.++++..     .
T Consensus        23 tG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   97 (262)
T PRK07831         23 TAAAGTGIGSATARRALEEGARVVISDIHERRLGETAD-----ELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGR   97 (262)
T ss_pred             ECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            69997 69999999999999999999887654221110     1111 11 35788999999998888877532     6


Q ss_pred             ccEEEEcCCCCcc--------------------cH----HHHHHhCC--C-CCcEEEEeeceeeccCCCCCccCccccch
Q 021331           73 FDVVYDINGREAD--------------------EV----EPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        73 ~d~vi~~a~~~~~--------------------~~----~~~~~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      +|++||++|....                    +.    +.++..+.  . ..++|++||...+...   +....|+.+|
T Consensus        98 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~---~~~~~Y~~sK  174 (262)
T PRK07831         98 LDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQ---HGQAHYAAAK  174 (262)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC---CCCcchHHHH
Confidence            8999999985311                    11    12222232  2 4578888885443221   2223689999


Q ss_pred             hhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          126 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       126 ~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      ...+.+.+       .+++++..++|+.+..|.............+....++         ..+...+|+|++++.++..
T Consensus       175 aal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~r~~~p~~va~~~~~l~s~  245 (262)
T PRK07831        175 AGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAF---------GRAAEPWEVANVIAFLASD  245 (262)
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHcCc
Confidence            98888764       2579999999999988742211112222223222211         2356689999999999876


Q ss_pred             Cc--cCCceEEecCC
Q 021331          199 EK--ASRQVFNISGE  211 (314)
Q Consensus       199 ~~--~~~~~~~i~~~  211 (314)
                      ..  ..|.++.+.++
T Consensus       246 ~~~~itG~~i~v~~~  260 (262)
T PRK07831        246 YSSYLTGEVVSVSSQ  260 (262)
T ss_pred             hhcCcCCceEEeCCC
Confidence            32  36777777664

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.44  E-value=9.2e-13  Score=124.85  Aligned_cols=202  Identities=18%  Similarity=0.199  Sum_probs=127.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh--ccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......     .+..  ....+..+.+|++|++++.+++++.     ++
T Consensus       420 TGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~-----~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~i  494 (676)
T TIGR02632       420 TGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAA-----EINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGV  494 (676)
T ss_pred             eCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----HHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999999999998654221100     0100  0135778899999999998888643     68


Q ss_pred             cEEEEcCCCCccc------------------------HHHHHHhCC--C-CCcEEEEeecee-eccCCCCCccCccccch
Q 021331           74 DVVYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGV-YLKSDLLPHCESRHKGK  125 (314)
Q Consensus        74 d~vi~~a~~~~~~------------------------~~~~~~~~~--~-~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~k  125 (314)
                      |+|||+||.....                        ++.++..+.  + ..++|++||... ++...    ...|+.+|
T Consensus       495 DilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~----~~aY~aSK  570 (676)
T TIGR02632       495 DIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKN----ASAYSAAK  570 (676)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCC----CHHHHHHH
Confidence            9999999863211                        112333333  2 357999999544 33222    22699999


Q ss_pred             hhHHHHHHh-------cCCceEEEecCeee-CCCCCCchhHHHHHHHHc-CCC----eecCCCCCceeeeeeHHHHHHHH
Q 021331          126 LNTESVLES-------KGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLKA-GRP----IPIPGSGIQVTQLGHVKDLARAF  192 (314)
Q Consensus       126 ~~~e~~~~~-------~~~~~~ilR~~~v~-g~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~i~~~D~a~~~  192 (314)
                      ...+.+++.       .++++..++|+.|+ |++......  ....... +..    ...+........+++.+|+|+++
T Consensus       571 aA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av  648 (676)
T TIGR02632       571 AAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEW--REERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAV  648 (676)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccc--hhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHH
Confidence            888887642       47999999999887 332111100  0000000 000    00001112234578899999999


Q ss_pred             HHHhcCC--ccCCceEEecCCcc
Q 021331          193 VQVLGNE--KASRQVFNISGEKY  213 (314)
Q Consensus       193 ~~~l~~~--~~~~~~~~i~~~~~  213 (314)
                      ..++...  ...|.++++.++..
T Consensus       649 ~~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       649 FFLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             HHHhCCcccCCcCcEEEECCCch
Confidence            9988753  23578999988754

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.44  E-value=4e-12  Score=106.89  Aligned_cols=192  Identities=15%  Similarity=0.143  Sum_probs=124.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|.||.++++.|.+.|++|+++++......  .     ..+......+..+.+|++|.+++.+++++.     .+|+
T Consensus        16 tG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~--~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~   88 (253)
T PRK08993         16 TGCDTGLGQGMALGLAEAGCDIVGINIVEPTET--I-----EQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI   88 (253)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEecCcchHHH--H-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999998876542210  0     111111246788999999998888887642     6899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHh----CC-C--CCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA--------------------DEVEPILDA----LP-N--LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~----~~-~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||...                    .+...++++    +. .  ..++|++||...+....   ....|+.+|...
T Consensus        89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~~sKaa~  165 (253)
T PRK08993         89 LVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGI---RVPSYTASKSGV  165 (253)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCC---CCcchHHHHHHH
Confidence            999998631                    112222222    32 1  25799999977664332   223689999887


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      +.+.+       .+|+++..++||.+-.+...... ..........  .++       ...+...+|+|++++.++.+..
T Consensus       166 ~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~--~~p-------~~r~~~p~eva~~~~~l~s~~~  236 (253)
T PRK08993        166 MGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILD--RIP-------AGRWGLPSDLMGPVVFLASSAS  236 (253)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHh--cCC-------CCCCcCHHHHHHHHHHHhCccc
Confidence            77663       25799999999998766321100 0001111111  111       1236678999999999998632


Q ss_pred             --cCCceEEecCC
Q 021331          201 --ASRQVFNISGE  211 (314)
Q Consensus       201 --~~~~~~~i~~~  211 (314)
                        ..|..+.+.++
T Consensus       237 ~~~~G~~~~~dgg  249 (253)
T PRK08993        237 DYINGYTIAVDGG  249 (253)
T ss_pred             cCccCcEEEECCC
Confidence              26777777665

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.43  E-value=3e-12  Score=108.04  Aligned_cols=196  Identities=14%  Similarity=0.139  Sum_probs=123.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh-ccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|++.|++|+++.|+.........    +.+.. ...++.++.+|++|+++++++++..     ++|
T Consensus        14 tGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   89 (260)
T PRK08416         14 SGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIA----EDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRVD   89 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCcc
Confidence            7999999999999999999999888765432111110    01111 1246889999999999888877642     589


Q ss_pred             EEEEcCCCCc---------------cc---------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccc
Q 021331           75 VVYDINGREA---------------DE---------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRH  122 (314)
Q Consensus        75 ~vi~~a~~~~---------------~~---------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (314)
                      ++||+||...               ..               ++.++..+.  +..++|++||...+..   .|....|+
T Consensus        90 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---~~~~~~Y~  166 (260)
T PRK08416         90 FFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVY---IENYAGHG  166 (260)
T ss_pred             EEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccC---CCCcccch
Confidence            9999997420               00               122333343  3468999999654321   12223689


Q ss_pred             cchhhHHHHHH-------hcCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHH
Q 021331          123 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       123 ~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                      .+|...+.+.+       .+|+++..+.||.+-.+.... +-............+         ...+...+|+|.+++.
T Consensus       167 asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~---------~~r~~~p~~va~~~~~  237 (260)
T PRK08416        167 TSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSP---------LNRMGQPEDLAGACLF  237 (260)
T ss_pred             hhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHH
Confidence            99988877763       257999999999875542100 000111111111111         1236678999999999


Q ss_pred             HhcCCc--cCCceEEecCCc
Q 021331          195 VLGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       195 ~l~~~~--~~~~~~~i~~~~  212 (314)
                      ++....  ..|..+.+.++.
T Consensus       238 l~~~~~~~~~G~~i~vdgg~  257 (260)
T PRK08416        238 LCSEKASWLTGQTIVVDGGT  257 (260)
T ss_pred             HcChhhhcccCcEEEEcCCe
Confidence            987532  267788887764

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.43  E-value=1.2e-12  Score=112.36  Aligned_cols=173  Identities=16%  Similarity=0.208  Sum_probs=116.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.+....+.++.+|+.|++++.++++..     ++|+
T Consensus        46 tGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~-----~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~  120 (293)
T PRK05866         46 TGASSGIGEAAAEQFARRGATVVAVARREDLLDAVA-----DRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDI  120 (293)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111     111111245788999999999888877632     6899


Q ss_pred             EEEcCCCCcc----------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      +||+||....                      +    ++.++..+.  +..++|++||.+++...  .|....|+.+|..
T Consensus       121 li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--~p~~~~Y~asKaa  198 (293)
T PRK05866        121 LINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEA--SPLFSVYNASKAA  198 (293)
T ss_pred             EEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC--CCCcchHHHHHHH
Confidence            9999986311                      0    122233332  55789999997665421  2223368999988


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      .+.+.+       ..++++++++||.+-.+...            ...  ..  .+   ...+..+++|+.++.++.++
T Consensus       199 l~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~------------~~~--~~--~~---~~~~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        199 LSAVSRVIETEWGDRGVHSTTLYYPLVATPMIA------------PTK--AY--DG---LPALTADEAAEWMVTAARTR  258 (293)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEEcCcccCcccc------------ccc--cc--cC---CCCCCHHHHHHHHHHHHhcC
Confidence            776653       35899999999976554210            000  00  00   12467899999999999864

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.43  E-value=1e-12  Score=110.88  Aligned_cols=176  Identities=18%  Similarity=0.151  Sum_probs=114.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc------CCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~------~~~d   74 (314)
                      |||+|+||.+++++|+++|++|++++|+.+.......     .+.  ..++.++.+|+.|.+++.+++..      .++|
T Consensus         7 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          7 TGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAA-----ELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----Hhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            7999999999999999999999999998765321110     000  24688999999999988887653      2579


Q ss_pred             EEEEcCCCCc--------------------ccHHHHHHh----CC--CCCcEEEEeece-eeccCCCCCccCccccchhh
Q 021331           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAG-VYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~k~~  127 (314)
                      +|||++|...                    .++..++++    +.  +..++|++||.. .++...    ...|+.+|..
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----~~~Y~~sKaa  155 (260)
T PRK08267         80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPG----LAVYSATKFA  155 (260)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCC----chhhHHHHHH
Confidence            9999998632                    112223333    33  457899999854 344322    2258888887


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      .+.+.+       ..++++++++|+.+-.+...... ........           ......+..+|+|++++.++..+
T Consensus       156 ~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~-~~~~~~~~-----------~~~~~~~~~~~va~~~~~~~~~~  222 (260)
T PRK08267        156 VRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTS-NEVDAGST-----------KRLGVRLTPEDVAEAVWAAVQHP  222 (260)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCCcCCccccccc-chhhhhhH-----------hhccCCCCHHHHHHHHHHHHhCC
Confidence            766653       34799999999987665211100 00000000           00011356799999999998653

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.42  E-value=1.2e-12  Score=109.26  Aligned_cols=171  Identities=15%  Similarity=0.144  Sum_probs=115.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh-ccCceEEEEecCCChhhHHHhhhcC--CccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK--GFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~l~~~~~~~--~~d~vi   77 (314)
                      |||+|+||.++++.|+++|++|++++|+.++......     .+.. ...++.++.+|++|++++.+++++.  .+|++|
T Consensus         7 tGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv   81 (243)
T PRK07102          7 IGATSDIARACARRYAAAGARLYLAARDVERLERLAD-----DLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL   81 (243)
T ss_pred             EcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-----HHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence            7999999999999999999999999998765321111     0000 1247889999999999888877632  479999


Q ss_pred             EcCCCCc--------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           78 DINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        78 ~~a~~~~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      |++|...                    .++..+++.    +.  +..++|++||......   .+....|+.+|...+.+
T Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---~~~~~~Y~~sK~a~~~~  158 (243)
T PRK07102         82 IAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRG---RASNYVYGSAKAALTAF  158 (243)
T ss_pred             ECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCC---CCCCcccHHHHHHHHHH
Confidence            9987521                    112223332    32  4578999998643222   12222588889877666


Q ss_pred             HH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          132 LE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       132 ~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      .+       ..+++++.++|+.+.++...             ..  ..++     ..++..+|+++.++..+.++
T Consensus       159 ~~~l~~el~~~gi~v~~v~pg~v~t~~~~-------------~~--~~~~-----~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        159 LSGLRNRLFKSGVHVLTVKPGFVRTPMTA-------------GL--KLPG-----PLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHhhccCcEEEEEecCcccChhhh-------------cc--CCCc-----cccCCHHHHHHHHHHHHhCC
Confidence            53       45799999999998876210             00  0111     13567899999999999864

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.42  E-value=5.4e-12  Score=106.59  Aligned_cols=196  Identities=17%  Similarity=0.190  Sum_probs=123.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|.||.++++.|.++|+.|+++.|+.........    ..+.....++.++.+|++|.+++.++++..     .+|+
T Consensus        13 tGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~----~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   88 (261)
T PRK08936         13 TGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVA----EEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDV   88 (261)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999988886533111111    111112346778999999999888776532     5899


Q ss_pred             EEEcCCCCccc------------------------HHHHHHhCC--C-CCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~~------------------------~~~~~~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+++.....                        ++.++..+.  + ..++|++||...+..   .|....|+.+|...
T Consensus        89 lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~---~~~~~~Y~~sKaa~  165 (261)
T PRK08936         89 MINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIP---WPLFVHYAASKGGV  165 (261)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCC---CCCCcccHHHHHHH
Confidence            99999863210                        122344443  2 358999999654322   22233688888665


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      +.+.+       ..+++++.++|+.+..+.....+ ............  +.       ..+...+|+++++..++....
T Consensus       166 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~va~~~~~l~s~~~  236 (261)
T PRK08936        166 KLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMI--PM-------GYIGKPEEIAAVAAWLASSEA  236 (261)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcC--CC-------CCCcCHHHHHHHHHHHcCccc
Confidence            55442       35899999999999877422111 111111121111  11       236668999999999987532


Q ss_pred             --cCCceEEecCCc
Q 021331          201 --ASRQVFNISGEK  212 (314)
Q Consensus       201 --~~~~~~~i~~~~  212 (314)
                        ..|..+.+.++.
T Consensus       237 ~~~~G~~i~~d~g~  250 (261)
T PRK08936        237 SYVTGITLFADGGM  250 (261)
T ss_pred             CCccCcEEEECCCc
Confidence              256677776664

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.42  E-value=7e-12  Score=105.57  Aligned_cols=196  Identities=16%  Similarity=0.112  Sum_probs=124.3

Q ss_pred             CCccc--ccHHHHHHHHHHCCCeEEEEEcCCcccccCCC--CC----CchhhhhccCceEEEEecCCChhhHHHhhhc--
Q 021331            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP--GE----SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--   70 (314)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~--   70 (314)
                      |||+|  .+|.++++.|+++|++|++++|++.+......  ..    ....+.....++.++.+|+++++++..+++.  
T Consensus        11 tGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   90 (256)
T PRK12748         11 TGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRVFYAVS   90 (256)
T ss_pred             eCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            69985  79999999999999999999987332100000  00    0011222234688999999999888777753  


Q ss_pred             ---CCccEEEEcCCCCc--------------------ccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCcc
Q 021331           71 ---KGFDVVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESR  121 (314)
Q Consensus        71 ---~~~d~vi~~a~~~~--------------------~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (314)
                         -.+|+|||++|...                    .++..+++++    .  ...++|++||...+....   ....|
T Consensus        91 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~---~~~~Y  167 (256)
T PRK12748         91 ERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMP---DELAY  167 (256)
T ss_pred             HhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCC---CchHH
Confidence               25899999998631                    1122333332    2  345899999977654322   12268


Q ss_pred             ccchhhHHHHHHh-------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHH
Q 021331          122 HKGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       122 ~~~k~~~e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                      +.+|...+.+++.       .+++++.++|+.+..+....    .........    .+.     ..+...+|+++++..
T Consensus       168 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~----~~~~~~~~~----~~~-----~~~~~~~~~a~~~~~  234 (256)
T PRK12748        168 AATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE----ELKHHLVPK----FPQ-----GRVGEPVDAARLIAF  234 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh----hHHHhhhcc----CCC-----CCCcCHHHHHHHHHH
Confidence            9999998887642       47999999999876653211    111111111    111     124457999999998


Q ss_pred             HhcCCc--cCCceEEecCCc
Q 021331          195 VLGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       195 ~l~~~~--~~~~~~~i~~~~  212 (314)
                      ++....  ..+.++++.++.
T Consensus       235 l~~~~~~~~~g~~~~~d~g~  254 (256)
T PRK12748        235 LVSEEAKWITGQVIHSEGGF  254 (256)
T ss_pred             HhCcccccccCCEEEecCCc
Confidence            887532  357888887763

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.41  E-value=2.1e-12  Score=112.31  Aligned_cols=179  Identities=17%  Similarity=0.223  Sum_probs=118.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-----CCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-----~~~d~   75 (314)
                      |||+|.||.++++.|+++|++|++++|+.+......     ..+......+.++.+|++|++++.++++.     -++|+
T Consensus        13 TGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~-----~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   87 (330)
T PRK06139         13 TGASSGIGQATAEAFARRGARLVLAARDEEALQAVA-----EECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDV   87 (330)
T ss_pred             cCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999876532111     11222235677889999999988887753     26899


Q ss_pred             EEEcCCCCcc--------------------cH----HHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||....                    ++    +.++..+.  +..++|++||...+..   .|....|..+|....
T Consensus        88 lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~---~p~~~~Y~asKaal~  164 (330)
T PRK06139         88 WVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAA---QPYAAAYSASKFGLR  164 (330)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCC---CCCchhHHHHHHHHH
Confidence            9999986321                    11    22333333  3468999998765532   233336888898654


Q ss_pred             HHH----H---h-cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          130 SVL----E---S-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       130 ~~~----~---~-~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.    .   . .++.++.+.|+.+.+|......      .. .+...      .....+.+.+|+|++++.++.++.
T Consensus       165 ~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~------~~-~~~~~------~~~~~~~~pe~vA~~il~~~~~~~  230 (330)
T PRK06139        165 GFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGA------NY-TGRRL------TPPPPVYDPRRVAKAVVRLADRPR  230 (330)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEecCCccCccccccc------cc-ccccc------cCCCCCCCHHHHHHHHHHHHhCCC
Confidence            443    2   2 3789999999999887421110      00 01110      011235789999999999998754

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.41  E-value=2.6e-12  Score=106.97  Aligned_cols=188  Identities=19%  Similarity=0.276  Sum_probs=121.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|++|.++++.|++.|++|++++|+.+.......     .+.. ..++.++.+|+.|++++.++++..     .+|.
T Consensus        11 tGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   84 (238)
T PRK05786         11 IGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKK-----TLSK-YGNIHYVVGDVSSTESARNVIEKAAKVLNAIDG   84 (238)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHh-cCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998754321100     0000 136788999999999888776532     4699


Q ss_pred             EEEcCCCCcc------------------c----HHHHHHhCCCCCcEEEEeecee-eccCCCCCccCccccchhhHHHHH
Q 021331           76 VYDINGREAD------------------E----VEPILDALPNLEQFIYCSSAGV-YLKSDLLPHCESRHKGKLNTESVL  132 (314)
Q Consensus        76 vi~~a~~~~~------------------~----~~~~~~~~~~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~k~~~e~~~  132 (314)
                      +||+++....                  .    .+.++..+....++|++||... ++.   .+....|..+|...+.++
T Consensus        85 ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~---~~~~~~Y~~sK~~~~~~~  161 (238)
T PRK05786         85 LVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKA---SPDQLSYAVAKAGLAKAV  161 (238)
T ss_pred             EEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccC---CCCchHHHHHHHHHHHHH
Confidence            9999875321                  1    1222233333457999988644 322   122235888898776554


Q ss_pred             H-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cCC
Q 021331          133 E-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASR  203 (314)
Q Consensus       133 ~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~~  203 (314)
                      +       ..+++++++||++++++.....    .....   .  .   .+   ..++..+|++++++.++..+.  ..|
T Consensus       162 ~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~----~~~~~---~--~---~~---~~~~~~~~va~~~~~~~~~~~~~~~g  226 (238)
T PRK05786        162 EILASELLGRGIRVNGIAPTTISGDFEPER----NWKKL---R--K---LG---DDMAPPEDFAKVIIWLLTDEADWVDG  226 (238)
T ss_pred             HHHHHHHhhcCeEEEEEecCccCCCCCchh----hhhhh---c--c---cc---CCCCCHHHHHHHHHHHhcccccCccC
Confidence            2       3589999999999998732110    00000   0  0   00   135678999999999997633  256


Q ss_pred             ceEEecCCc
Q 021331          204 QVFNISGEK  212 (314)
Q Consensus       204 ~~~~i~~~~  212 (314)
                      ..+.+.++.
T Consensus       227 ~~~~~~~~~  235 (238)
T PRK05786        227 VVIPVDGGA  235 (238)
T ss_pred             CEEEECCcc
Confidence            677776543

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.41  E-value=5.7e-12  Score=105.79  Aligned_cols=189  Identities=13%  Similarity=0.092  Sum_probs=118.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC---------
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---------   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~---------   71 (314)
                      |||+|+||.+++++|+++|++|++++|+..+....+.       .....++.++.+|++|++++.+++++.         
T Consensus         7 tGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK06924          7 TGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA-------EQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNV   79 (251)
T ss_pred             ecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH-------hccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence            7999999999999999999999999997632111111       011256889999999999988887632         


Q ss_pred             CccEEEEcCCCC---------------------ccc----HHHHHHhCC---CCCcEEEEeeceeeccCCCCCccCcccc
Q 021331           72 GFDVVYDINGRE---------------------ADE----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCESRHK  123 (314)
Q Consensus        72 ~~d~vi~~a~~~---------------------~~~----~~~~~~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (314)
                      +..++||++|..                     ..+    .+.++..+.   ..++||++||...+....   ....|+.
T Consensus        80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---~~~~Y~~  156 (251)
T PRK06924         80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYF---GWSAYCS  156 (251)
T ss_pred             CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCC---CcHHHhH
Confidence            112788887752                     111    233444443   245899999976543222   2226899


Q ss_pred             chhhHHHHHH---------hcCCceEEEecCeeeCCCCCC------chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHH
Q 021331          124 GKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYN------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  188 (314)
Q Consensus       124 ~k~~~e~~~~---------~~~~~~~ilR~~~v~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  188 (314)
                      +|...+.+.+         ..++++..++||.+-.+....      ..+. ........    . .    ...+..++|+
T Consensus       157 sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~----~-~----~~~~~~~~dv  226 (251)
T PRK06924        157 SKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFT-NLDRFITL----K-E----EGKLLSPEYV  226 (251)
T ss_pred             HHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccch-HHHHHHHH----h-h----cCCcCCHHHH
Confidence            9998887763         236889999999776542100      0000 00000000    0 0    1135788999


Q ss_pred             HHHHHHHhcC-CccCCceEEec
Q 021331          189 ARAFVQVLGN-EKASRQVFNIS  209 (314)
Q Consensus       189 a~~~~~~l~~-~~~~~~~~~i~  209 (314)
                      |++++.++.. ....|..+.+.
T Consensus       227 a~~~~~l~~~~~~~~G~~~~v~  248 (251)
T PRK06924        227 AKALRNLLETEDFPNGEVIDID  248 (251)
T ss_pred             HHHHHHHHhcccCCCCCEeehh
Confidence            9999999986 33356655554

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.41  E-value=5e-12  Score=106.67  Aligned_cols=199  Identities=17%  Similarity=0.162  Sum_probs=125.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|.||.++++.|+++|++|++++|+.+.......     .+.. ..++.++.+|++|+++++++++..     ++|+
T Consensus         6 tGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          6 TASSRGIGFNVARELLKKGARVVISSRNEENLEKALK-----ELKE-YGEVYAVKADLSDKDDLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             EcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHh-cCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654321111     1111 135788999999999888877532     6899


Q ss_pred             EEEcCCCCcc----------------------c----HHHHHHhCC---CCCcEEEEeeceeeccCCCCCccCccccchh
Q 021331           76 VYDINGREAD----------------------E----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCESRHKGKL  126 (314)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~~~~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~  126 (314)
                      +||++|....                      +    ++.++..+.   +..++|++||.......   |....|..+|.
T Consensus        80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~---~~~~~y~~sKa  156 (259)
T PRK08340         80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPM---PPLVLADVTRA  156 (259)
T ss_pred             EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCC---CCchHHHHHHH
Confidence            9999985210                      0    112222221   34689999997664321   22225888888


Q ss_pred             hHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHH-------HHHcCCCeecCCCCCceeeeeeHHHHHHHH
Q 021331          127 NTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH-------RLKAGRPIPIPGSGIQVTQLGHVKDLARAF  192 (314)
Q Consensus       127 ~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  192 (314)
                      ..+.+.+       ..|+.+..+.||.+-.+..... ......       ......   + ........+...+|+|+++
T Consensus       157 a~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~---~-~~~~p~~r~~~p~dva~~~  231 (259)
T PRK08340        157 GLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGAREN-LARIAEERGVSFEETWERE---V-LERTPLKRTGRWEELGSLI  231 (259)
T ss_pred             HHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHH-HHhhhhccCCchHHHHHHH---H-hccCCccCCCCHHHHHHHH
Confidence            7777654       2478899999998766532110 000000       000000   0 0001112366789999999


Q ss_pred             HHHhcCC--ccCCceEEecCCcc
Q 021331          193 VQVLGNE--KASRQVFNISGEKY  213 (314)
Q Consensus       193 ~~~l~~~--~~~~~~~~i~~~~~  213 (314)
                      +.++...  ...|.++.+.++..
T Consensus       232 ~fL~s~~~~~itG~~i~vdgg~~  254 (259)
T PRK08340        232 AFLLSENAEYMLGSTIVFDGAMT  254 (259)
T ss_pred             HHHcCcccccccCceEeecCCcC
Confidence            9999863  23677888887753

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.40  E-value=1.8e-12  Score=111.52  Aligned_cols=183  Identities=23%  Similarity=0.275  Sum_probs=117.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|.||.++++.|.++|++|++++|+.+.......     .+.. ...+..+.+|++|++++.++++..     .+|+
T Consensus        15 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~-----~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   88 (296)
T PRK05872         15 TGAARGIGAELARRLHARGAKLALVDLEEAELAALAA-----ELGG-DDRVLTVVADVTDLAAMQAAAEEAVERFGGIDV   88 (296)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HhcC-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654321111     0000 134566679999999888877532     5899


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHh----CC-CCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           76 VYDINGREAD--------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      |||++|....                    +..++++.    +. ...++|++||...+...   +....|+.+|...+.
T Consensus        89 vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asKaal~~  165 (296)
T PRK05872         89 VVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAA---PGMAAYCASKAGVEA  165 (296)
T ss_pred             EEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCC---CCchHHHHHHHHHHH
Confidence            9999996321                    12222222    22 34589999997665432   222368999988877


Q ss_pred             HHH-------hcCCceEEEecCeeeCCCCCCchhH-HHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          131 VLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       131 ~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      +.+       ..++.+.++.|+.+..+........ .....+....+.+       ...++..+|++++++.++.+.
T Consensus       166 ~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~~va~~i~~~~~~~  235 (296)
T PRK05872        166 FANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWP-------LRRTTSVEKCAAAFVDGIERR  235 (296)
T ss_pred             HHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCc-------ccCCCCHHHHHHHHHHHHhcC
Confidence            763       3579999999998876532110000 1111111111111       124667999999999999764

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.40  E-value=2.8e-12  Score=107.46  Aligned_cols=171  Identities=17%  Similarity=0.179  Sum_probs=114.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+||.+++++|+++|++|++++|+.........     .+...  ..++.++.+|++|++++.+++++.     ++
T Consensus         8 tGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   82 (248)
T PRK08251          8 TGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKA-----ELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGL   82 (248)
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            7999999999999999999999999998754321110     00000  246888999999998888777532     58


Q ss_pred             cEEEEcCCCCcc--------------------cHHHHH----HhCC--CCCcEEEEeeceee-ccCCCCCccCccccchh
Q 021331           74 DVVYDINGREAD--------------------EVEPIL----DALP--NLEQFIYCSSAGVY-LKSDLLPHCESRHKGKL  126 (314)
Q Consensus        74 d~vi~~a~~~~~--------------------~~~~~~----~~~~--~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~k~  126 (314)
                      |++||++|....                    +...++    +.+.  +..+||++||.... +.+.   ....|+.+|.
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---~~~~Y~~sK~  159 (248)
T PRK08251         83 DRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPG---VKAAYAASKA  159 (248)
T ss_pred             CEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCC---CcccHHHHHH
Confidence            999999985321                    112222    2232  55689999996543 3221   1125899998


Q ss_pred             hHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          127 NTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       127 ~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      ..+.+.+       ..+++++.++|+.+.++...         .   ..      .   ....++.+|.|++++..+++.
T Consensus       160 a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~---------~---~~------~---~~~~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        160 GVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNA---------K---AK------S---TPFMVDTETGVKALVKAIEKE  218 (248)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCcCcchhhh---------c---cc------c---CCccCCHHHHHHHHHHHHhcC
Confidence            8776653       24689999999988765210         0   00      0   113577899999999999864


Q ss_pred             c
Q 021331          200 K  200 (314)
Q Consensus       200 ~  200 (314)
                      .
T Consensus       219 ~  219 (248)
T PRK08251        219 P  219 (248)
T ss_pred             C
Confidence            3

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.40  E-value=4.2e-12  Score=107.35  Aligned_cols=192  Identities=16%  Similarity=0.166  Sum_probs=124.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......        ....++.++.+|+.|++++..+++..     .+|+
T Consensus        12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200         12 TGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQ--------RFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654321110        11245788999999998888777542     6899


Q ss_pred             EEEcCCCCcc-------------------------c----HHHHHHhCC-CCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           76 VYDINGREAD-------------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        76 vi~~a~~~~~-------------------------~----~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      +||++|....                         +    ++.++..+. ...++|++||...+.....   ...|+.+|
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---~~~Y~~sK  160 (263)
T PRK06200         84 FVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGG---GPLYTASK  160 (263)
T ss_pred             EEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC---CchhHHHH
Confidence            9999985210                         0    112222232 3357999999766543222   12589999


Q ss_pred             hhHHHHHHh------cCCceEEEecCeeeCCCCCCc-h---------hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHH
Q 021331          126 LNTESVLES------KGVNWTSLRPVYIYGPLNYNP-V---------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  189 (314)
Q Consensus       126 ~~~e~~~~~------~~~~~~ilR~~~v~g~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  189 (314)
                      ...+.+.+.      .++++..+.||.+..+..... .         .+.........         .....+...+|+|
T Consensus       161 ~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~~~eva  231 (263)
T PRK06200        161 HAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAI---------TPLQFAPQPEDHT  231 (263)
T ss_pred             HHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcC---------CCCCCCCCHHHHh
Confidence            888777642      248899999999876521100 0         00011111110         1112466789999


Q ss_pred             HHHHHHhcCC-c--cCCceEEecCCc
Q 021331          190 RAFVQVLGNE-K--ASRQVFNISGEK  212 (314)
Q Consensus       190 ~~~~~~l~~~-~--~~~~~~~i~~~~  212 (314)
                      ++++.++... .  ..|..+.+.++.
T Consensus       232 ~~~~fl~s~~~~~~itG~~i~vdgG~  257 (263)
T PRK06200        232 GPYVLLASRRNSRALTGVVINADGGL  257 (263)
T ss_pred             hhhhheecccccCcccceEEEEcCce
Confidence            9999998754 2  267888887774

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.40  E-value=4.7e-12  Score=107.62  Aligned_cols=181  Identities=17%  Similarity=0.208  Sum_probs=116.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCC---CchhhhhccCceEEEEecCCChhhHHHhhhcC-----C
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE---SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~   72 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.... +...   ....+.....++.++.+|+++++++.++++..     +
T Consensus        12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   90 (273)
T PRK08278         12 TGASRGIGLAIALRAARDGANIVIAAKTAEPHPK-LPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVERFGG   90 (273)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEecccccccc-hhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            7999999999999999999999999998654211 1100   00112223356888999999999988887643     6


Q ss_pred             ccEEEEcCCCCc--------------------ccHHHHHHhCC------CCCcEEEEeeceeeccCCCCCccCccccchh
Q 021331           73 FDVVYDINGREA--------------------DEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCESRHKGKL  126 (314)
Q Consensus        73 ~d~vi~~a~~~~--------------------~~~~~~~~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~  126 (314)
                      +|++||++|...                    .++.++++++.      +..++|++||....... ..+....|+.+|.
T Consensus        91 id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-~~~~~~~Y~~sK~  169 (273)
T PRK08278         91 IDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK-WFAPHTAYTMAKY  169 (273)
T ss_pred             CCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc-ccCCcchhHHHHH
Confidence            899999998621                    12333444432      34578888875422111 1122337999999


Q ss_pred             hHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          127 NTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       127 ~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      ..+.+++       .+++.++.+.|+.+...    ..    ......+.        .....+...+|+|++++.++..+
T Consensus       170 a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t----~~----~~~~~~~~--------~~~~~~~~p~~va~~~~~l~~~~  233 (273)
T PRK08278        170 GMSLCTLGLAEEFRDDGIAVNALWPRTTIAT----AA----VRNLLGGD--------EAMRRSRTPEIMADAAYEILSRP  233 (273)
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEeCCCcccc----HH----HHhccccc--------ccccccCCHHHHHHHHHHHhcCc
Confidence            9988764       24789999999742221    11    11111111        11124668899999999998764

>PRK06484 short chain dehydrogenase; Validated

Probab=99.38  E-value=5.9e-12  Score=116.91  Aligned_cols=192  Identities=16%  Similarity=0.225  Sum_probs=126.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|.||.++++.|.++|++|++++|+.+.......        .....+..+.+|++|++++..+++..     .+|+
T Consensus       275 tGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  346 (520)
T PRK06484        275 TGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAE--------ALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV  346 (520)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654321110        11245677899999999888877642     5899


Q ss_pred             EEEcCCCCc---------------------ccH----HHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           76 VYDINGREA---------------------DEV----EPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        76 vi~~a~~~~---------------------~~~----~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      +||+||...                     .++    +.++..+.+..++|++||...+...   +....|+.+|...+.
T Consensus       347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asKaal~~  423 (520)
T PRK06484        347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLAL---PPRNAYCASKAAVTM  423 (520)
T ss_pred             EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCC---CCCchhHHHHHHHHH
Confidence            999998631                     111    2223333344689999997654322   222368999988877


Q ss_pred             HHH-------hcCCceEEEecCeeeCCCCCCch--hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          131 VLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       131 ~~~-------~~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      +.+       .+|+++..++||.+..+......  .......+....+  .       ..+..++|+|++++.++.... 
T Consensus       424 l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~dia~~~~~l~s~~~~  494 (520)
T PRK06484        424 LSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIP--L-------GRLGDPEEVAEAIAFLASPAAS  494 (520)
T ss_pred             HHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCC--C-------CCCcCHHHHHHHHHHHhCcccc
Confidence            664       34799999999998876321100  0011111111111  1       135678999999999997532 


Q ss_pred             -cCCceEEecCCc
Q 021331          201 -ASRQVFNISGEK  212 (314)
Q Consensus       201 -~~~~~~~i~~~~  212 (314)
                       ..|+++.+.++.
T Consensus       495 ~~~G~~i~vdgg~  507 (520)
T PRK06484        495 YVNGATLTVDGGW  507 (520)
T ss_pred             CccCcEEEECCCc
Confidence             367888888774

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.38  E-value=2.7e-11  Score=101.77  Aligned_cols=192  Identities=10%  Similarity=0.050  Sum_probs=123.9

Q ss_pred             CCcc--cccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+  +.||.++++.|+++|++|++++|+... ...+.     .+.  ...+.++.+|++|+++++++++..     ++
T Consensus        13 tGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~-~~~~~-----~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079         13 MGVANKRSIAWGCAQAIKDQGATVIYTYQNDRM-KKSLQ-----KLV--DEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             eCCCCCCchHHHHHHHHHHCCCEEEEecCchHH-HHHHH-----hhc--cCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            7998  799999999999999999999887321 11111     000  135788999999998888776532     58


Q ss_pred             cEEEEcCCCCcc------------------------c----HHHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           74 DVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        74 d~vi~~a~~~~~------------------------~----~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      |++||+||....                        +    ++.++..+....++|++||......   .|....|+.+|
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~---~~~~~~Y~asK  161 (252)
T PRK06079         85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERA---IPNYNVMGIAK  161 (252)
T ss_pred             CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcccc---CCcchhhHHHH
Confidence            999999985310                        0    1223333443468999998654321   22223688999


Q ss_pred             hhHHHHHH-------hcCCceEEEecCeeeCCCCCCc-hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          126 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       126 ~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      ...+.+.+       ..|+.+..|.||.|-.+..... -............  +       ...+...+|+|++++.++.
T Consensus       162 aal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~--p-------~~r~~~pedva~~~~~l~s  232 (252)
T PRK06079        162 AALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRT--V-------DGVGVTIEEVGNTAAFLLS  232 (252)
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcC--c-------ccCCCCHHHHHHHHHHHhC
Confidence            88877763       3579999999999876521110 0111222221111  1       1236678999999999997


Q ss_pred             CC--ccCCceEEecCCc
Q 021331          198 NE--KASRQVFNISGEK  212 (314)
Q Consensus       198 ~~--~~~~~~~~i~~~~  212 (314)
                      ..  ...|.++.+.++.
T Consensus       233 ~~~~~itG~~i~vdgg~  249 (252)
T PRK06079        233 DLSTGVTGDIIYVDKGV  249 (252)
T ss_pred             cccccccccEEEeCCce
Confidence            63  2367788887764

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.37  E-value=6e-12  Score=105.13  Aligned_cols=137  Identities=15%  Similarity=0.125  Sum_probs=98.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc---------C
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---------K   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~---------~   71 (314)
                      |||+|+||.+++++|+++|++|++++|+.....  .        .....++.++.+|+.|++++.+++.+         .
T Consensus         7 tGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T PRK07023          7 TGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--A--------AAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA   76 (243)
T ss_pred             ecCCcchHHHHHHHHHhCCCEEEEEecCcchhh--h--------hccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence            799999999999999999999999999865311  0        01124688899999999988885542         2


Q ss_pred             CccEEEEcCCCCcc---------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccc
Q 021331           72 GFDVVYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKG  124 (314)
Q Consensus        72 ~~d~vi~~a~~~~~---------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (314)
                      .+|++||+++....                     +    ++.+++.+.  +.+++|++||...+....   ....|+.+
T Consensus        77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---~~~~Y~~s  153 (243)
T PRK07023         77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYA---GWSVYCAT  153 (243)
T ss_pred             CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCC---CchHHHHH
Confidence            57999999885321                     1    233444444  456899999977654322   12268999


Q ss_pred             hhhHHHHHH------hcCCceEEEecCeeeCC
Q 021331          125 KLNTESVLE------SKGVNWTSLRPVYIYGP  150 (314)
Q Consensus       125 k~~~e~~~~------~~~~~~~ilR~~~v~g~  150 (314)
                      |...+.+++      ..++++..++|+.+-.+
T Consensus       154 K~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        154 KAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             HHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence            998888875      24789999999887544

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.36  E-value=1e-11  Score=102.24  Aligned_cols=174  Identities=15%  Similarity=0.159  Sum_probs=118.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC--CccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~--~~d~vi~   78 (314)
                      |||+|.+|+++++.|.++|++|++++|+.++......          ..++.++.+|++|+++++++++..  .+|++||
T Consensus         6 tGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~   75 (223)
T PRK05884          6 TGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAK----------ELDVDAIVCDNTDPASLEEARGLFPHHLDTIVN   75 (223)
T ss_pred             EeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------hccCcEEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence            7999999999999999999999999998654321111          024678899999999998887643  5899999


Q ss_pred             cCCCCc--------------cc---------------HHHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           79 INGREA--------------DE---------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        79 ~a~~~~--------------~~---------------~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +++...              ..               ++.++..+....++|++||...       +....|..+|...+
T Consensus        76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~-------~~~~~Y~asKaal~  148 (223)
T PRK05884         76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP-------PAGSAEAAIKAALS  148 (223)
T ss_pred             CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC-------CCccccHHHHHHHH
Confidence            986310              00               1223333333368999998641       12236899998877


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       .+++++..+.||.+..+.     .    ... . .   .+        .-..+|+++++..++....  
T Consensus       149 ~~~~~la~e~~~~gI~v~~v~PG~v~t~~-----~----~~~-~-~---~p--------~~~~~~ia~~~~~l~s~~~~~  206 (223)
T PRK05884        149 NWTAGQAAVFGTRGITINAVACGRSVQPG-----Y----DGL-S-R---TP--------PPVAAEIARLALFLTTPAARH  206 (223)
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCccCchh-----h----hhc-c-C---CC--------CCCHHHHHHHHHHHcCchhhc
Confidence            7653       357899999999876541     0    100 0 0   00        1267999999999987532  


Q ss_pred             cCCceEEecCCcc
Q 021331          201 ASRQVFNISGEKY  213 (314)
Q Consensus       201 ~~~~~~~i~~~~~  213 (314)
                      ..|.++.+.++..
T Consensus       207 v~G~~i~vdgg~~  219 (223)
T PRK05884        207 ITGQTLHVSHGAL  219 (223)
T ss_pred             cCCcEEEeCCCee
Confidence            2677888877653

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.36  E-value=3.4e-12  Score=107.84  Aligned_cols=193  Identities=15%  Similarity=0.175  Sum_probs=121.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......        ....++.++.+|+.|.+++.+++++.     ++|+
T Consensus        11 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   82 (262)
T TIGR03325        11 TGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEA--------AHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC   82 (262)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh--------hcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999988654321111        01245788999999998887777532     6899


Q ss_pred             EEEcCCCCc-------------------------ccHHHHHHh----CC-CCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           76 VYDINGREA-------------------------DEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        76 vi~~a~~~~-------------------------~~~~~~~~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      +||+||...                         .++..++++    +. ...++|++||...+....   ....|+.+|
T Consensus        83 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~---~~~~Y~~sK  159 (262)
T TIGR03325        83 LIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNG---GGPLYTAAK  159 (262)
T ss_pred             EEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCC---CCchhHHHH
Confidence            999998521                         001122232    22 225788888865442211   122588899


Q ss_pred             hhHHHHHHh----c--CCceEEEecCeeeCCCCCCchh---HH----H-HHHHHcCCCeecCCCCCceeeeeeHHHHHHH
Q 021331          126 LNTESVLES----K--GVNWTSLRPVYIYGPLNYNPVE---EW----F-FHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  191 (314)
Q Consensus       126 ~~~e~~~~~----~--~~~~~ilR~~~v~g~~~~~~~~---~~----~-~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  191 (314)
                      ...+.+.+.    .  .+++..+.||.+..+-......   ..    . ...... ...+       ...+...+|+|++
T Consensus       160 aa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p-------~~r~~~p~eva~~  231 (262)
T TIGR03325       160 HAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLK-SVLP-------IGRMPDAEEYTGA  231 (262)
T ss_pred             HHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhh-hcCC-------CCCCCChHHhhhh
Confidence            888877642    2  3788999999987653111000   00    0 001000 0011       1235678999999


Q ss_pred             HHHHhcCCc---cCCceEEecCCc
Q 021331          192 FVQVLGNEK---ASRQVFNISGEK  212 (314)
Q Consensus       192 ~~~~l~~~~---~~~~~~~i~~~~  212 (314)
                      ++.++.++.   ..|.++.+.++.
T Consensus       232 ~~~l~s~~~~~~~tG~~i~vdgg~  255 (262)
T TIGR03325       232 YVFFATRGDTVPATGAVLNYDGGM  255 (262)
T ss_pred             eeeeecCCCcccccceEEEecCCe
Confidence            999887532   267788887764

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.34  E-value=1.1e-11  Score=104.87  Aligned_cols=175  Identities=17%  Similarity=0.123  Sum_probs=113.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC----CccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~----~~d~v   76 (314)
                      |||+|++|.+++++|+++|++|++++|+.+.......     .+ ....++.++.+|+.|++++..+++..    .+|++
T Consensus        11 tG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~l   84 (263)
T PRK09072         11 TGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAA-----RL-PYPGRHRWVVADLTSEAGREAVLARAREMGGINVL   84 (263)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HH-hcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCEE
Confidence            7999999999999999999999999998654321110     11 11247889999999998888776532    58999


Q ss_pred             EEcCCCCcc--------------------cHHHHHHh----CC--CCCcEEEEeeceee-ccCCCCCccCccccchhhHH
Q 021331           77 YDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVY-LKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        77 i~~a~~~~~--------------------~~~~~~~~----~~--~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~k~~~e  129 (314)
                      ||++|....                    ++.++++.    +.  +..++|++||...+ +...    ...|+.+|...+
T Consensus        85 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----~~~Y~~sK~a~~  160 (263)
T PRK09072         85 INNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPG----YASYCASKFALR  160 (263)
T ss_pred             EECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCC----ccHHHHHHHHHH
Confidence            999986321                    12233333    22  34678888885432 3222    225888888765


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+++       ..++.++.+.|+.+..+..     ..    .. ....   .  .....+..++|+|++++.+++++.
T Consensus       161 ~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~-----~~----~~-~~~~---~--~~~~~~~~~~~va~~i~~~~~~~~  223 (263)
T PRK09072        161 GFSEALRRELADTGVRVLYLAPRATRTAMN-----SE----AV-QALN---R--ALGNAMDDPEDVAAAVLQAIEKER  223 (263)
T ss_pred             HHHHHHHHHhcccCcEEEEEecCcccccch-----hh----hc-cccc---c--cccCCCCCHHHHHHHHHHHHhCCC
Confidence            5542       3568899999988765421     00    00 0000   0  001135678999999999998753

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.34  E-value=1.2e-11  Score=102.08  Aligned_cols=140  Identities=18%  Similarity=0.122  Sum_probs=95.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC---CccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~---~~d~vi   77 (314)
                      |||+|++|.++++.|+++|++|++++|+...... +.        . ..++.++.+|+.|++++.++++..   ++|+||
T Consensus         7 tG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~--------~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi   76 (225)
T PRK08177          7 IGASRGLGLGLVDRLLERGWQVTATVRGPQQDTA-LQ--------A-LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF   76 (225)
T ss_pred             eCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHH-HH--------h-ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence            7999999999999999999999999998765321 11        0 246778899999998888877643   699999


Q ss_pred             EcCCCCc----------------------ccHHHHHH----hCC-CCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           78 DINGREA----------------------DEVEPILD----ALP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        78 ~~a~~~~----------------------~~~~~~~~----~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      |++|...                      .+...+.+    .+. +..+++++||..........+....|+.+|...+.
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~  156 (225)
T PRK08177         77 VNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNS  156 (225)
T ss_pred             EcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCccchHHHHHHHHH
Confidence            9987631                      11222333    333 33578888874322111111112268899998888


Q ss_pred             HHH-------hcCCceEEEecCeeeCC
Q 021331          131 VLE-------SKGVNWTSLRPVYIYGP  150 (314)
Q Consensus       131 ~~~-------~~~~~~~ilR~~~v~g~  150 (314)
                      +.+       .+++.+..++||.+-.+
T Consensus       157 ~~~~l~~e~~~~~i~v~~i~PG~i~t~  183 (225)
T PRK08177        157 MTRSFVAELGEPTLTVLSMHPGWVKTD  183 (225)
T ss_pred             HHHHHHHHhhcCCeEEEEEcCCceecC
Confidence            774       24688999999987665

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.34  E-value=3.5e-11  Score=102.36  Aligned_cols=197  Identities=14%  Similarity=0.114  Sum_probs=121.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc----CCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~----~~~d~v   76 (314)
                      ||| |+||.++++.|. +|++|++++|+.+......     ..+.....++.++.+|++|++++.++++.    -.+|++
T Consensus         8 tGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l   80 (275)
T PRK06940          8 IGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAA-----KTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL   80 (275)
T ss_pred             ECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence            576 799999999996 8999999999765422111     11111124678899999999988888764    258999


Q ss_pred             EEcCCCCc-------------ccHHHHHHh----CCCCCcEEEEeeceeeccCC------------------------CC
Q 021331           77 YDINGREA-------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSD------------------------LL  115 (314)
Q Consensus        77 i~~a~~~~-------------~~~~~~~~~----~~~~~~~i~~Ss~~v~~~~~------------------------~~  115 (314)
                      ||+||...             .++.++++.    +....++|++||........                        ..
T Consensus        81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (275)
T PRK06940         81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPD  160 (275)
T ss_pred             EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccccccc
Confidence            99998632             122233333    33234667777754432110                        00


Q ss_pred             ---CccCccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCch---hHHHHHHHHcCCCeecCCCCCceeee
Q 021331          116 ---PHCESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQL  182 (314)
Q Consensus       116 ---~~~e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (314)
                         +....|..+|...+.+.+       .+++.+..|.||.+..+.....+   .......+....  +       ...+
T Consensus       161 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--p-------~~r~  231 (275)
T PRK06940        161 AIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKS--P-------AGRP  231 (275)
T ss_pred             ccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhC--C-------cccC
Confidence               112368999988766653       35799999999998776321100   001111111111  1       1236


Q ss_pred             eeHHHHHHHHHHHhcCCc--cCCceEEecCCcc
Q 021331          183 GHVKDLARAFVQVLGNEK--ASRQVFNISGEKY  213 (314)
Q Consensus       183 i~~~D~a~~~~~~l~~~~--~~~~~~~i~~~~~  213 (314)
                      ...+|+|++++.++....  ..|..+.+.++..
T Consensus       232 ~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~  264 (275)
T PRK06940        232 GTPDEIAALAEFLMGPRGSFITGSDFLVDGGAT  264 (275)
T ss_pred             CCHHHHHHHHHHHcCcccCcccCceEEEcCCeE
Confidence            778999999999987532  3678888887753

>PRK05855 short chain dehydrogenase; Validated

Probab=99.34  E-value=2.4e-12  Score=121.11  Aligned_cols=142  Identities=16%  Similarity=0.081  Sum_probs=101.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|.++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     .+|+
T Consensus       321 ~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  395 (582)
T PRK05855        321 TGAGSGIGRETALAFAREGAEVVASDIDEAAAERTA-----ELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDI  395 (582)
T ss_pred             ECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            799999999999999999999999999865432111     111112346889999999999988887642     4899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHh----CC--C-CCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||...                    .++.++.++    +.  + ..++|++||...+.....   ...|+.+|...
T Consensus       396 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---~~~Y~~sKaa~  472 (582)
T PRK05855        396 VVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRS---LPAYATSKAAV  472 (582)
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCC---CcHHHHHHHHH
Confidence            999998732                    112233332    22  2 358999999887754322   23699999987


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCC
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGP  150 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~  150 (314)
                      +.+.+       .+|+++++++||.|-.+
T Consensus       473 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~  501 (582)
T PRK05855        473 LMLSECLRAELAAAGIGVTAICPGFVDTN  501 (582)
T ss_pred             HHHHHHHHHHhcccCcEEEEEEeCCCccc
Confidence            76653       35899999999988654

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.33  E-value=9.4e-12  Score=118.85  Aligned_cols=172  Identities=15%  Similarity=0.184  Sum_probs=119.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|+.|++++.++++..     ++|+
T Consensus       377 tGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  451 (657)
T PRK07201        377 TGASSGIGRATAIKVAEAGATVFLVARNGEALDELV-----AEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDY  451 (657)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865432111     111112356889999999999888877642     5899


Q ss_pred             EEEcCCCCcc----------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      +||+||....                      +    ++.++..+.  +..++|++||.+.+....   ....|+.+|..
T Consensus       452 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~~sK~a  528 (657)
T PRK07201        452 LVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAP---RFSAYVASKAA  528 (657)
T ss_pred             EEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC---CcchHHHHHHH
Confidence            9999985310                      0    122333343  557899999988775432   22368999988


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      .+.+.+       ..++.+++++||.|..+.....            ..  . .    ...+++.+++|+.++..+.+.
T Consensus       529 ~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~------------~~--~-~----~~~~~~~~~~a~~i~~~~~~~  588 (657)
T PRK07201        529 LDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT------------KR--Y-N----NVPTISPEEAADMVVRAIVEK  588 (657)
T ss_pred             HHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc------------cc--c-c----CCCCCCHHHHHHHHHHHHHhC
Confidence            888764       3579999999999877631100            00  0 0    123567899999999988653

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.33  E-value=1.5e-11  Score=104.24  Aligned_cols=197  Identities=14%  Similarity=0.124  Sum_probs=118.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh-ccCceEEEEecCCChhhH----HHhhhc----C
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFV----KSSLSA----K   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~l----~~~~~~----~   71 (314)
                      |||+|+||.++++.|+++|++|+++.|+.......+.    ..+.. ....+.++.+|++|++++    +++++.    .
T Consensus         7 TGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~   82 (267)
T TIGR02685         7 TGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLA----AELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAF   82 (267)
T ss_pred             eCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHH----HHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHcc
Confidence            7999999999999999999999998765322111110    01110 013466789999998754    333321    1


Q ss_pred             -CccEEEEcCCCCcc-------------------------------cHHHHHHh----CC--------CCCcEEEEeece
Q 021331           72 -GFDVVYDINGREAD-------------------------------EVEPILDA----LP--------NLEQFIYCSSAG  107 (314)
Q Consensus        72 -~~d~vi~~a~~~~~-------------------------------~~~~~~~~----~~--------~~~~~i~~Ss~~  107 (314)
                       ++|+|||+||....                               +...+.++    +.        ...++|++||..
T Consensus        83 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~  162 (267)
T TIGR02685        83 GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAM  162 (267)
T ss_pred             CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhh
Confidence             69999999985210                               01112222    21        113577777654


Q ss_pred             eeccCCCCCccCccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCcee
Q 021331          108 VYLKSDLLPHCESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVT  180 (314)
Q Consensus       108 v~~~~~~~~~~e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (314)
                      ....   .+....|+.+|...+.+.+       ..|++++.|+||.+..|.....   .........  .++ +     .
T Consensus       163 ~~~~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~---~~~~~~~~~--~~~-~-----~  228 (267)
T TIGR02685       163 TDQP---LLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPF---EVQEDYRRK--VPL-G-----Q  228 (267)
T ss_pred             ccCC---CcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccch---hHHHHHHHh--CCC-C-----c
Confidence            3211   2222369999998887764       2589999999999876632211   111111111  111 0     1


Q ss_pred             eeeeHHHHHHHHHHHhcCCc--cCCceEEecCCcccc
Q 021331          181 QLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       181 ~~i~~~D~a~~~~~~l~~~~--~~~~~~~i~~~~~~s  215 (314)
                      .+...+|++++++.++.+..  ..|..+.+.++..++
T Consensus       229 ~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~~  265 (267)
T TIGR02685       229 REASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSLT  265 (267)
T ss_pred             CCCCHHHHHHHHHHHhCcccCCcccceEEECCceecc
Confidence            24578999999999997642  367788888776443

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.33  E-value=1.8e-11  Score=104.09  Aligned_cols=180  Identities=18%  Similarity=0.168  Sum_probs=112.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhcc-CceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.... ..+.++.+|+.|++++.+++++.     ++|
T Consensus         6 tGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          6 TGAASGIGRATALRLAAQGAELFLTDRDADGLAQTV-----ADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            799999999999999999999999998765422111     0111111 23456789999998887766532     589


Q ss_pred             EEEEcCCCCcc--------------------cHHHHHHh----CC---CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           75 VVYDINGREAD--------------------EVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~~~~~----~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      ++||++|....                    +...++++    +.   ...++|++||...+..   .|....|+.+|..
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~---~~~~~~Y~~sK~a  157 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA---LPWHAAYSASKFG  157 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC---CCCCcchHHHHHH
Confidence            99999986321                    12223333    22   2468999999654322   2223358888876


Q ss_pred             HHHHH-------HhcCCceEEEecCeeeCCCCCCch------hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHH
Q 021331          128 TESVL-------ESKGVNWTSLRPVYIYGPLNYNPV------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       128 ~e~~~-------~~~~~~~~ilR~~~v~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                      .+.+.       ..+++++++++||.+.++......      ..........          ......+..+|+|++++.
T Consensus       158 ~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~vA~~~~~  227 (272)
T PRK07832        158 LRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD----------RFRGHAVTPEKAAEKILA  227 (272)
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH----------hcccCCCCHHHHHHHHHH
Confidence            55544       246899999999999887321100      0000000000          001235788999999999


Q ss_pred             HhcC
Q 021331          195 VLGN  198 (314)
Q Consensus       195 ~l~~  198 (314)
                      ++..
T Consensus       228 ~~~~  231 (272)
T PRK07832        228 GVEK  231 (272)
T ss_pred             HHhc
Confidence            9864

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.32  E-value=7.1e-12  Score=105.74  Aligned_cols=199  Identities=11%  Similarity=0.074  Sum_probs=123.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecCCChhhHHHhhhcC-CccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-GFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi~   78 (314)
                      |||+|.+|.++++.|++.|++|++++|+.+......     ..+... ..++.++.+|++|++++.++++.. .+|++||
T Consensus        13 tG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~   87 (259)
T PRK06125         13 TGASKGIGAAAAEAFAAEGCHLHLVARDADALEALA-----ADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDILVN   87 (259)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEEEE
Confidence            699999999999999999999999999865432111     011111 246788999999999998888754 5999999


Q ss_pred             cCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHH
Q 021331           79 INGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVL  132 (314)
Q Consensus        79 ~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~  132 (314)
                      ++|....                    +    ++.++..+.  +..++|++||......   .+....|..+|...+.+.
T Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~---~~~~~~y~ask~al~~~~  164 (259)
T PRK06125         88 NAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENP---DADYICGSAGNAALMAFT  164 (259)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCC---CCCchHhHHHHHHHHHHH
Confidence            9986321                    1    122333333  3357999888543211   111114677787766655


Q ss_pred             H-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHc---CCC--eecCCCCCceeeeeeHHHHHHHHHHHhcCC-
Q 021331          133 E-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA---GRP--IPIPGSGIQVTQLGHVKDLARAFVQVLGNE-  199 (314)
Q Consensus       133 ~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~-  199 (314)
                      +       ..+++++.++||.+..+.     ...+......   +.+  ............+...+|+|++++.++.+. 
T Consensus       165 ~~la~e~~~~gi~v~~i~PG~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  239 (259)
T PRK06125        165 RALGGKSLDDGVRVVGVNPGPVATDR-----MLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLASPRS  239 (259)
T ss_pred             HHHHHHhCccCeEEEEEecCccccHH-----HHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcCchh
Confidence            4       357999999999887652     1111100000   000  000000001123567899999999998753 


Q ss_pred             -ccCCceEEecCCc
Q 021331          200 -KASRQVFNISGEK  212 (314)
Q Consensus       200 -~~~~~~~~i~~~~  212 (314)
                       ...|..+.+.++.
T Consensus       240 ~~~~G~~i~vdgg~  253 (259)
T PRK06125        240 GYTSGTVVTVDGGI  253 (259)
T ss_pred             ccccCceEEecCCe
Confidence             2367888888774

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.32  E-value=5.4e-11  Score=102.88  Aligned_cols=146  Identities=16%  Similarity=0.086  Sum_probs=97.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+||.++++.|+++|++|++++|+.++......     .+...  ...+.++.+|+.|.+++.+++++.     ++
T Consensus        22 tGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i   96 (306)
T PRK06197         22 TGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAA-----RITAATPGADVTLQELDLTSLASVRAAADALRAAYPRI   96 (306)
T ss_pred             cCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCC
Confidence            7999999999999999999999999998654221110     11110  246788999999999888877532     58


Q ss_pred             cEEEEcCCCCc------------------cc----HHHHHHhCC--CCCcEEEEeeceee--ccCCC------CCc--cC
Q 021331           74 DVVYDINGREA------------------DE----VEPILDALP--NLEQFIYCSSAGVY--LKSDL------LPH--CE  119 (314)
Q Consensus        74 d~vi~~a~~~~------------------~~----~~~~~~~~~--~~~~~i~~Ss~~v~--~~~~~------~~~--~e  119 (314)
                      |++||+||...                  .+    ++.+++.+.  +..++|++||...+  +....      .++  ..
T Consensus        97 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~  176 (306)
T PRK06197         97 DLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVA  176 (306)
T ss_pred             CEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCCcHH
Confidence            99999998521                  11    445666665  45799999997543  21110      011  12


Q ss_pred             ccccchhhHHHHHHh-------cCCceEE--EecCeeeCCC
Q 021331          120 SRHKGKLNTESVLES-------KGVNWTS--LRPVYIYGPL  151 (314)
Q Consensus       120 ~~~~~k~~~e~~~~~-------~~~~~~i--lR~~~v~g~~  151 (314)
                      .|+.+|...+.+.+.       .++++++  +.||.|..+.
T Consensus       177 ~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        177 AYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence            689999887776532       3555544  4799887663

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.32  E-value=9.4e-12  Score=108.40  Aligned_cols=145  Identities=15%  Similarity=0.148  Sum_probs=96.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.........     .+.....++.++.+|+.|.+++..+++..     ++|+
T Consensus        12 TGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~   86 (322)
T PRK07453         12 TGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQ-----ELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDA   86 (322)
T ss_pred             EcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCccE
Confidence            7999999999999999999999999998654321111     01001246888999999999888877641     4899


Q ss_pred             EEEcCCCCcc---------------------c----HHHHHHhCC--C--CCcEEEEeeceeeccC-C------------
Q 021331           76 VYDINGREAD---------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKS-D------------  113 (314)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~~~~~~~--~--~~~~i~~Ss~~v~~~~-~------------  113 (314)
                      +||+||....                     +    ++.++..+.  +  ..|+|++||...+... .            
T Consensus        87 li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~  166 (322)
T PRK07453         87 LVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLG  166 (322)
T ss_pred             EEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccchh
Confidence            9999985210                     1    122333333  2  3599999996553210 0            


Q ss_pred             -----------------CCCcc--CccccchhhHHHH----HHh----cCCceEEEecCeeeCC
Q 021331          114 -----------------LLPHC--ESRHKGKLNTESV----LES----KGVNWTSLRPVYIYGP  150 (314)
Q Consensus       114 -----------------~~~~~--e~~~~~k~~~e~~----~~~----~~~~~~ilR~~~v~g~  150 (314)
                                       ..++.  ..|+.+|...+.+    .++    .++.++.++||.|++.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t  230 (322)
T PRK07453        167 DLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT  230 (322)
T ss_pred             hhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence                             00111  2699999765443    333    3799999999999864

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.32  E-value=2.8e-11  Score=95.30  Aligned_cols=187  Identities=20%  Similarity=0.259  Sum_probs=126.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      .|+.||.|+++++...+.++.|..+.|+..+..  +.        .....+.++++|....+-+...+.  ++..++.++
T Consensus        58 lggnpfsgs~vlk~A~~vv~svgilsen~~k~~--l~--------sw~~~vswh~gnsfssn~~k~~l~--g~t~v~e~~  125 (283)
T KOG4288|consen   58 LGGNPFSGSEVLKNATNVVHSVGILSENENKQT--LS--------SWPTYVSWHRGNSFSSNPNKLKLS--GPTFVYEMM  125 (283)
T ss_pred             hcCCCcchHHHHHHHHhhceeeeEeecccCcch--hh--------CCCcccchhhccccccCcchhhhc--CCcccHHHh
Confidence            389999999999999999999999999865421  11        112568888888876665666666  888888876


Q ss_pred             CCC--------ccc--HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHH-HhcCCceEEEecCee
Q 021331           81 GRE--------ADE--VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVL-ESKGVNWTSLRPVYI  147 (314)
Q Consensus        81 ~~~--------~~~--~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~-~~~~~~~~ilR~~~v  147 (314)
                      +..        ..+  ..+.+.++.  ++++|+|+|... ||-.+..|.  .|..+|+.+|..+ +.++.+-++||||.+
T Consensus       126 ggfgn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d-~~~~~~i~r--GY~~gKR~AE~Ell~~~~~rgiilRPGFi  202 (283)
T KOG4288|consen  126 GGFGNIILMDRINGTANINAVKAAAKAGVPRFVYISAHD-FGLPPLIPR--GYIEGKREAEAELLKKFRFRGIILRPGFI  202 (283)
T ss_pred             cCccchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh-cCCCCccch--hhhccchHHHHHHHHhcCCCceeecccee
Confidence            642        112  233344443  899999999632 222222222  5888999999877 457788999999999


Q ss_pred             eCCCCCCc------hhHHHHHHHHcCC--C-eecCCCCCceeeeeeHHHHHHHHHHHhcCCccC
Q 021331          148 YGPLNYNP------VEEWFFHRLKAGR--P-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  202 (314)
Q Consensus       148 ~g~~~~~~------~~~~~~~~~~~~~--~-~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~  202 (314)
                      ||......      .+...+.+..+..  + -.++--+.-...++.++++|.+.+.++.+|...
T Consensus       203 yg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f~  266 (283)
T KOG4288|consen  203 YGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDFK  266 (283)
T ss_pred             ecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCcC
Confidence            99753211      1112233332222  1 112233455678999999999999999998755

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.31  E-value=2.4e-11  Score=98.30  Aligned_cols=162  Identities=18%  Similarity=0.209  Sum_probs=110.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-CccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi~~   79 (314)
                      |||+|.||.++++.|.++ ++|++++|+..                      .+.+|++|+++++++++.. ++|++||+
T Consensus         6 tGas~giG~~la~~l~~~-~~vi~~~r~~~----------------------~~~~D~~~~~~~~~~~~~~~~id~lv~~   62 (199)
T PRK07578          6 IGASGTIGRAVVAELSKR-HEVITAGRSSG----------------------DVQVDITDPASIRALFEKVGKVDAVVSA   62 (199)
T ss_pred             EcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------------ceEecCCChHHHHHHHHhcCCCCEEEEC
Confidence            799999999999999999 99999988642                      2578999999999988765 69999999


Q ss_pred             CCCCcc--------------------cHHHHHHhC----CCCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHH--
Q 021331           80 NGREAD--------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLE--  133 (314)
Q Consensus        80 a~~~~~--------------------~~~~~~~~~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~--  133 (314)
                      +|....                    +..++.+++    .+..+++++||......   .|....|..+|...+.+.+  
T Consensus        63 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~---~~~~~~Y~~sK~a~~~~~~~l  139 (199)
T PRK07578         63 AGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEP---IPGGASAATVNGALEGFVKAA  139 (199)
T ss_pred             CCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCC---CCCchHHHHHHHHHHHHHHHH
Confidence            986311                    122333332    24457899888554321   1222258888877766653  


Q ss_pred             ----hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEe
Q 021331          134 ----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI  208 (314)
Q Consensus       134 ----~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i  208 (314)
                          ..++.+..++|+.+-.+.      .    ..  ...  +++     ..++..+|+|+++..+++.. ..|++|++
T Consensus       140 a~e~~~gi~v~~i~Pg~v~t~~------~----~~--~~~--~~~-----~~~~~~~~~a~~~~~~~~~~-~~g~~~~~  198 (199)
T PRK07578        140 ALELPRGIRINVVSPTVLTESL------E----KY--GPF--FPG-----FEPVPAARVALAYVRSVEGA-QTGEVYKV  198 (199)
T ss_pred             HHHccCCeEEEEEcCCcccCch------h----hh--hhc--CCC-----CCCCCHHHHHHHHHHHhccc-eeeEEecc
Confidence                357889999998764431      0    00  010  111     23678999999999999864 35677765

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.31  E-value=9.5e-11  Score=98.68  Aligned_cols=195  Identities=14%  Similarity=0.077  Sum_probs=122.2

Q ss_pred             CCccc--ccHHHHHHHHHHCCCeEEEEEcCCcccccC----CC--CCCchhhhhccCceEEEEecCCChhhHHHhhhcC-
Q 021331            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ----LP--GESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-   71 (314)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-   71 (314)
                      |||+|  .||.+++++|+++|++|+++.|........    ..  ......+......+.++.+|++|.+++.++++.. 
T Consensus        12 tGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~~~~~~   91 (256)
T PRK12859         12 TGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKELLNKVT   91 (256)
T ss_pred             ECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            79985  899999999999999999876542110000    00  0001122233456788999999999888887532 


Q ss_pred             ----CccEEEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCcc
Q 021331           72 ----GFDVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESR  121 (314)
Q Consensus        72 ----~~d~vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (314)
                          .+|++||++|....                    +    ++.++..+.  +..+||++||......   .+....|
T Consensus        92 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---~~~~~~Y  168 (256)
T PRK12859         92 EQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGP---MVGELAY  168 (256)
T ss_pred             HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCC---CCCchHH
Confidence                47999999986311                    0    223344443  3468999999765422   1222368


Q ss_pred             ccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHH
Q 021331          122 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       122 ~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                      +.+|...+.+.+       .++++++.++||.+-.+...    ...........+         ...+...+|+|++++.
T Consensus       169 ~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~----~~~~~~~~~~~~---------~~~~~~~~d~a~~~~~  235 (256)
T PRK12859        169 AATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT----EEIKQGLLPMFP---------FGRIGEPKDAARLIKF  235 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC----HHHHHHHHhcCC---------CCCCcCHHHHHHHHHH
Confidence            889988877653       35799999999988665211    111111111111         1124568999999999


Q ss_pred             HhcCC--ccCCceEEecCC
Q 021331          195 VLGNE--KASRQVFNISGE  211 (314)
Q Consensus       195 ~l~~~--~~~~~~~~i~~~  211 (314)
                      ++...  ...|.++.+.++
T Consensus       236 l~s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        236 LASEEAEWITGQIIHSEGG  254 (256)
T ss_pred             HhCccccCccCcEEEeCCC
Confidence            88753  226777777665

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.31  E-value=1.5e-10  Score=88.98  Aligned_cols=192  Identities=17%  Similarity=0.209  Sum_probs=126.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccc---cCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----C
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA---QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~   72 (314)
                      |||+..||+++++.|.++|++|.+.+++.....   ..++.         ..+...+.||+.++.++...+++.     .
T Consensus        20 tGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g---------~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~   90 (256)
T KOG1200|consen   20 TGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG---------YGDHSAFSCDVSKAHDVQNTLEEMEKSLGT   90 (256)
T ss_pred             ecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC---------CCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence            799999999999999999999999998876532   33332         135677899999987776655432     5


Q ss_pred             ccEEEEcCCCCccc------------------------HHHHHHhCC----CCCcEEEEeec-eeeccCCCCCccC----
Q 021331           73 FDVVYDINGREADE------------------------VEPILDALP----NLEQFIYCSSA-GVYLKSDLLPHCE----  119 (314)
Q Consensus        73 ~d~vi~~a~~~~~~------------------------~~~~~~~~~----~~~~~i~~Ss~-~v~~~~~~~~~~e----  119 (314)
                      +++++||||++.+.                        ++...+++-    +.-++|.+||. +-.|+..-..|..    
T Consensus        91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~G  170 (256)
T KOG1200|consen   91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGG  170 (256)
T ss_pred             CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCc
Confidence            89999999985432                        334444421    33389999993 3333332221111    


Q ss_pred             ccccchhhHHHHHHhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          120 SRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       120 ~~~~~k~~~e~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      -.+-+|..+.+. ...++++..+.||.|-.|-. ..+.+.+...+...-|+.-         +-..+|+|..++.+....
T Consensus       171 vIgftktaArEl-a~knIrvN~VlPGFI~tpMT-~~mp~~v~~ki~~~iPmgr---------~G~~EevA~~V~fLAS~~  239 (256)
T KOG1200|consen  171 VIGFTKTAAREL-ARKNIRVNVVLPGFIATPMT-EAMPPKVLDKILGMIPMGR---------LGEAEEVANLVLFLASDA  239 (256)
T ss_pred             eeeeeHHHHHHH-hhcCceEeEeccccccChhh-hhcCHHHHHHHHccCCccc---------cCCHHHHHHHHHHHhccc
Confidence            123345555544 34679999999999888732 3344556666665554422         334799999999888654


Q ss_pred             cc--CCceEEecCCc
Q 021331          200 KA--SRQVFNISGEK  212 (314)
Q Consensus       200 ~~--~~~~~~i~~~~  212 (314)
                      ..  .|..+.++++-
T Consensus       240 ssYiTG~t~evtGGl  254 (256)
T KOG1200|consen  240 SSYITGTTLEVTGGL  254 (256)
T ss_pred             cccccceeEEEeccc
Confidence            32  56778887763

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.31  E-value=6.3e-11  Score=97.57  Aligned_cols=172  Identities=16%  Similarity=0.095  Sum_probs=113.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC---CccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~---~~d~vi   77 (314)
                      |||+|++|.++++.|++.|++|++++|+.+.... +.          ..+++++.+|+++.+.+..++.+.   .+|++|
T Consensus         7 tG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~-~~----------~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi   75 (222)
T PRK06953          7 VGASRGIGREFVRQYRADGWRVIATARDAAALAA-LQ----------ALGAEALALDVADPASVAGLAWKLDGEALDAAV   75 (222)
T ss_pred             EcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH-HH----------hccceEEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence            7999999999999999999999999998654321 11          134678999999999888865432   589999


Q ss_pred             EcCCCCc----------------------ccHHHHHHhCC-----CCCcEEEEeec-eeeccCCCCCccCccccchhhHH
Q 021331           78 DINGREA----------------------DEVEPILDALP-----NLEQFIYCSSA-GVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        78 ~~a~~~~----------------------~~~~~~~~~~~-----~~~~~i~~Ss~-~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |+++...                      .++.++++++.     ...+++++||. +.++.....+. -.|..+|...+
T Consensus        76 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~-~~Y~~sK~a~~  154 (222)
T PRK06953         76 YVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTG-WLYRASKAALN  154 (222)
T ss_pred             ECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCc-cccHHhHHHHH
Confidence            9988631                      11233333332     23478888884 44553322211 14899999888


Q ss_pred             HHHHh-----cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCcc--C
Q 021331          130 SVLES-----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA--S  202 (314)
Q Consensus       130 ~~~~~-----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~--~  202 (314)
                      .+++.     .+++++.++|+.+..+...              .           ..++..++.++.+..++.....  .
T Consensus       155 ~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~--------------~-----------~~~~~~~~~~~~~~~~~~~~~~~~~  209 (222)
T PRK06953        155 DALRAASLQARHATCIALHPGWVRTDMGG--------------A-----------QAALDPAQSVAGMRRVIAQATRRDN  209 (222)
T ss_pred             HHHHHHhhhccCcEEEEECCCeeecCCCC--------------C-----------CCCCCHHHHHHHHHHHHHhcCcccC
Confidence            87753     2578899999987765210              0           1134678888888887764322  3


Q ss_pred             CceEEec
Q 021331          203 RQVFNIS  209 (314)
Q Consensus       203 ~~~~~i~  209 (314)
                      +..|...
T Consensus       210 ~~~~~~~  216 (222)
T PRK06953        210 GRFFQYD  216 (222)
T ss_pred             ceEEeeC
Confidence            4445444

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.30  E-value=5.4e-11  Score=101.80  Aligned_cols=196  Identities=17%  Similarity=0.134  Sum_probs=120.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCccc-----ccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC----
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-----AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~----   71 (314)
                      |||++.||.++++.|+++|++|++++|+....     ...+. .....+.....++.++.+|++|++++.++++..    
T Consensus        12 TGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   90 (286)
T PRK07791         12 TGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQ-AVVDEIVAAGGEAVANGDDIADWDGAANLVDAAVETF   90 (286)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHH-HHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHhc
Confidence            79999999999999999999999988765110     00000 000112222346788899999998888776532    


Q ss_pred             -CccEEEEcCCCCcc--------------------c----HHHHHHhCC-C-------CCcEEEEeeceeeccCCCCCcc
Q 021331           72 -GFDVVYDINGREAD--------------------E----VEPILDALP-N-------LEQFIYCSSAGVYLKSDLLPHC  118 (314)
Q Consensus        72 -~~d~vi~~a~~~~~--------------------~----~~~~~~~~~-~-------~~~~i~~Ss~~v~~~~~~~~~~  118 (314)
                       .+|++||+||....                    +    ++.++..+. .       ..++|++||...+...   +..
T Consensus        91 g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~---~~~  167 (286)
T PRK07791         91 GGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGS---VGQ  167 (286)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCC---CCc
Confidence             58999999986321                    1    122232222 1       2489999986543221   222


Q ss_pred             CccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHH
Q 021331          119 ESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  191 (314)
Q Consensus       119 e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  191 (314)
                      ..|+.+|...+.+.+       .+|+++..|.|+ +..+     +............+     .  ....+...+|+|++
T Consensus       168 ~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~-----~~~~~~~~~~~~~~-----~--~~~~~~~pedva~~  234 (286)
T PRK07791        168 GNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTR-----MTETVFAEMMAKPE-----E--GEFDAMAPENVSPL  234 (286)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCC-----cchhhHHHHHhcCc-----c--cccCCCCHHHHHHH
Confidence            268888988776653       368999999997 4322     11111111111111     0  01134578999999


Q ss_pred             HHHHhcCC--ccCCceEEecCCcc
Q 021331          192 FVQVLGNE--KASRQVFNISGEKY  213 (314)
Q Consensus       192 ~~~~l~~~--~~~~~~~~i~~~~~  213 (314)
                      ++.++...  ...|..+.+.++..
T Consensus       235 ~~~L~s~~~~~itG~~i~vdgG~~  258 (286)
T PRK07791        235 VVWLGSAESRDVTGKVFEVEGGKI  258 (286)
T ss_pred             HHHHhCchhcCCCCcEEEEcCCce
Confidence            99998753  23677888887753

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.29  E-value=2.7e-11  Score=104.64  Aligned_cols=191  Identities=15%  Similarity=0.092  Sum_probs=119.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC----CccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~----~~d~v   76 (314)
                      |||+|+||.++++.|+++|++|++.++..........    ..+.....++.++.+|+.|++++.++++..    ++|++
T Consensus        18 TGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~----~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD~l   93 (306)
T PRK07792         18 TGAAAGLGRAEALGLARLGATVVVNDVASALDASDVL----DEIRAAGAKAVAVAGDISQRATADELVATAVGLGGLDIV   93 (306)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHH----HHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCCEE
Confidence            7999999999999999999999998875432111110    112222356888999999998888877532    58999


Q ss_pred             EEcCCCCcc--------------------cHHHHHHhC----C-C--------CCcEEEEeeceeeccCCCCCccCcccc
Q 021331           77 YDINGREAD--------------------EVEPILDAL----P-N--------LEQFIYCSSAGVYLKSDLLPHCESRHK  123 (314)
Q Consensus        77 i~~a~~~~~--------------------~~~~~~~~~----~-~--------~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (314)
                      ||+||....                    ++..+++++    . .        ..++|++||...+....   ....|+.
T Consensus        94 i~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~a  170 (306)
T PRK07792         94 VNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPV---GQANYGA  170 (306)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCC---CCchHHH
Confidence            999986321                    122233322    1 1        24899999865543222   2226899


Q ss_pred             chhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          124 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       124 ~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      +|...+.+.+       .+|+.+..+.|+.  ..    .+.....    ...+...    .....++..+|++.++..++
T Consensus       171 sKaal~~l~~~la~e~~~~gI~vn~i~Pg~--~t----~~~~~~~----~~~~~~~----~~~~~~~~pe~va~~v~~L~  236 (306)
T PRK07792        171 AKAGITALTLSAARALGRYGVRANAICPRA--RT----AMTADVF----GDAPDVE----AGGIDPLSPEHVVPLVQFLA  236 (306)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEECCCC--CC----chhhhhc----cccchhh----hhccCCCCHHHHHHHHHHHc
Confidence            9988877753       3578888888862  11    1111110    0000000    01123457899999999888


Q ss_pred             cCC--ccCCceEEecCCc
Q 021331          197 GNE--KASRQVFNISGEK  212 (314)
Q Consensus       197 ~~~--~~~~~~~~i~~~~  212 (314)
                      ...  ...|++|.+.++.
T Consensus       237 s~~~~~~tG~~~~v~gg~  254 (306)
T PRK07792        237 SPAAAEVNGQVFIVYGPM  254 (306)
T ss_pred             CccccCCCCCEEEEcCCe
Confidence            753  2367888887654

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.29  E-value=5.5e-11  Score=99.05  Aligned_cols=172  Identities=14%  Similarity=0.075  Sum_probs=109.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh-ccCceEEEEecCCC--hhhHHHhhh----c--C
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKD--YDFVKSSLS----A--K   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d--~~~l~~~~~----~--~   71 (314)
                      |||+|++|.+++++|+++|++|++++|+.........     .+.. ....+.++.+|+.+  .+++.++++    .  .
T Consensus        12 tG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~   86 (239)
T PRK08703         12 TGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYD-----AIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQG   86 (239)
T ss_pred             ECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH-----HHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCC
Confidence            7999999999999999999999999998754221100     0000 01346678889875  334444332    1  2


Q ss_pred             CccEEEEcCCCCc---------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccc
Q 021331           72 GFDVVYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKG  124 (314)
Q Consensus        72 ~~d~vi~~a~~~~---------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (314)
                      ++|+|||++|...                     .+..+++++    +.  +..++|++||......   .+....|+.+
T Consensus        87 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~---~~~~~~Y~~s  163 (239)
T PRK08703         87 KLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETP---KAYWGGFGAS  163 (239)
T ss_pred             CCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccC---CCCccchHHh
Confidence            6899999998521                     112223333    33  4568999998544321   2222369999


Q ss_pred             hhhHHHHHHh-------c-CCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          125 KLNTESVLES-------K-GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       125 k~~~e~~~~~-------~-~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      |...+.+++.       . ++++++++||.|++|.....         ..       +.  ....+...+|++..+..++
T Consensus       164 Kaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~---------~~-------~~--~~~~~~~~~~~~~~~~~~~  225 (239)
T PRK08703        164 KAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS---------HP-------GE--AKSERKSYGDVLPAFVWWA  225 (239)
T ss_pred             HHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc---------CC-------CC--CccccCCHHHHHHHHHHHh
Confidence            9998887632       2 58999999999998832100         00       11  1123568899999999999


Q ss_pred             cC
Q 021331          197 GN  198 (314)
Q Consensus       197 ~~  198 (314)
                      ..
T Consensus       226 ~~  227 (239)
T PRK08703        226 SA  227 (239)
T ss_pred             Cc
Confidence            74

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.29  E-value=1.3e-10  Score=97.94  Aligned_cols=195  Identities=11%  Similarity=0.071  Sum_probs=122.7

Q ss_pred             CCcc--cccHHHHHHHHHHCCCeEEEEEcCCccc--ccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----
Q 021331            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPI--AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----   71 (314)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----   71 (314)
                      |||+  +.||.++++.|.+.|++|++..|+.+..  ...+     +.+.+....+.++.+|++|++++.++++..     
T Consensus        12 tGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g   86 (258)
T PRK07370         12 TGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKV-----RELTEPLNPSLFLPCDVQDDAQIEETFETIKQKWG   86 (258)
T ss_pred             eCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHH-----HHHHhccCcceEeecCcCCHHHHHHHHHHHHHHcC
Confidence            6875  7999999999999999998887654321  1001     111111234678899999999988877643     


Q ss_pred             CccEEEEcCCCCcc------------------------c----HHHHHHhCCCCCcEEEEeeceeeccCCCCCccCcccc
Q 021331           72 GFDVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHK  123 (314)
Q Consensus        72 ~~d~vi~~a~~~~~------------------------~----~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (314)
                      ++|++||++|....                        +    ++.++..+....++|++||......   .|....|+.
T Consensus        87 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~---~~~~~~Y~a  163 (258)
T PRK07370         87 KLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRA---IPNYNVMGV  163 (258)
T ss_pred             CCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccC---CcccchhhH
Confidence            58999999985310                        0    2233333443468999999654321   222236899


Q ss_pred             chhhHHHHHH-------hcCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHH
Q 021331          124 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  195 (314)
Q Consensus       124 ~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  195 (314)
                      +|...+.+.+       .+|+.+..+.||.+-.+.... .-............         ....+...+|++.++..+
T Consensus       164 sKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~---------p~~r~~~~~dva~~~~fl  234 (258)
T PRK07370        164 AKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKA---------PLRRTVTQTEVGNTAAFL  234 (258)
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcC---------CcCcCCCHHHHHHHHHHH
Confidence            9988877764       357999999999987652110 00011111111111         112466789999999999


Q ss_pred             hcCCc--cCCceEEecCCc
Q 021331          196 LGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       196 l~~~~--~~~~~~~i~~~~  212 (314)
                      +.+..  ..|+++.+.++.
T Consensus       235 ~s~~~~~~tG~~i~vdgg~  253 (258)
T PRK07370        235 LSDLASGITGQTIYVDAGY  253 (258)
T ss_pred             hChhhccccCcEEEECCcc
Confidence            97532  367788887764

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.28  E-value=3.9e-11  Score=104.22  Aligned_cols=189  Identities=19%  Similarity=0.146  Sum_probs=119.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhh-HHHhhhcC--CccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF-VKSSLSAK--GFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-l~~~~~~~--~~d~vi   77 (314)
                      +||||.+|+.+++.|+++|+.|+++.|+.......+..      .....+...+..|...+.+ +..+....  ...+++
T Consensus        85 vGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~------~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~v~  158 (411)
T KOG1203|consen   85 VGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGV------FFVDLGLQNVEADVVTAIDILKKLVEAVPKGVVIVI  158 (411)
T ss_pred             ecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcc------cccccccceeeeccccccchhhhhhhhccccceeEE
Confidence            59999999999999999999999999998775443330      0002455666666655433 33333322  133555


Q ss_pred             EcCCC-------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC---ccccchhhHHHHHHhcCCce
Q 021331           78 DINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE---SRHKGKLNTESVLESKGVNW  139 (314)
Q Consensus        78 ~~a~~-------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e---~~~~~k~~~e~~~~~~~~~~  139 (314)
                      -+++-             ...++.|++++|.  +++||+++|+.+.-......+...   .+...|..+|+++++.|+++
T Consensus       159 ~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~~~~~~~~k~~~e~~~~~Sgl~y  238 (411)
T KOG1203|consen  159 KGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLLNGLVLKAKLKAEKFLQDSGLPY  238 (411)
T ss_pred             ecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhhhhhhhHHHHhHHHHHHhcCCCc
Confidence            55432             2346899999998  999999998876532221111111   23467899999999999999


Q ss_pred             EEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCC
Q 021331          140 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  203 (314)
Q Consensus       140 ~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~  203 (314)
                      +|||++...-......-      ....+.+....+++.  --.+.-.|+|+.++.++.+....+
T Consensus       239 tiIR~g~~~~~~~~~~~------~~~~~~~~~~~~~~~--~~~i~r~~vael~~~all~~~~~~  294 (411)
T KOG1203|consen  239 TIIRPGGLEQDTGGQRE------VVVDDEKELLTVDGG--AYSISRLDVAELVAKALLNEAATF  294 (411)
T ss_pred             EEEeccccccCCCCcce------ecccCcccccccccc--ceeeehhhHHHHHHHHHhhhhhcc
Confidence            99999986553211100      001111111111111  146778999999999998866544

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.28  E-value=1.5e-10  Score=97.80  Aligned_cols=194  Identities=11%  Similarity=0.100  Sum_probs=120.8

Q ss_pred             CCc--ccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||  ++.||.++++.|+++|++|++..|+... ...+.     ++.........+.+|++|+++++++++..     ++
T Consensus        12 TGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   85 (261)
T PRK08690         12 TGMISERSIAYGIAKACREQGAELAFTYVVDKL-EERVR-----KMAAELDSELVFRCDVASDDEINQVFADLGKHWDGL   85 (261)
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHH-HHHHH-----HHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            686  6799999999999999999988765321 11110     11111123457899999999888877532     59


Q ss_pred             cEEEEcCCCCcc---------c--------------------HHHHHHhCC-CCCcEEEEeeceeeccCCCCCccCcccc
Q 021331           74 DVVYDINGREAD---------E--------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCESRHK  123 (314)
Q Consensus        74 d~vi~~a~~~~~---------~--------------------~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (314)
                      |++||+||....         .                    ++.++..+. +..++|++||...+..   .|....|+.
T Consensus        86 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~---~~~~~~Y~a  162 (261)
T PRK08690         86 DGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRA---IPNYNVMGM  162 (261)
T ss_pred             cEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccC---CCCcccchh
Confidence            999999987421         0                    011112222 2357899998665422   222236889


Q ss_pred             chhhHHHHHH-------hcCCceEEEecCeeeCCCCCCc-hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHH
Q 021331          124 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  195 (314)
Q Consensus       124 ~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  195 (314)
                      +|...+.+.+       .+|+++..+.||.+-.+..... -.......+...  .+       ...+...+|+|++++.+
T Consensus       163 sKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~--~p-------~~r~~~peevA~~v~~l  233 (261)
T PRK08690        163 AKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAH--NP-------LRRNVTIEEVGNTAAFL  233 (261)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhc--CC-------CCCCCCHHHHHHHHHHH
Confidence            9988776653       4689999999998866521110 001111111111  11       12366789999999999


Q ss_pred             hcCCc--cCCceEEecCCc
Q 021331          196 LGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       196 l~~~~--~~~~~~~i~~~~  212 (314)
                      +....  ..|.++.+.++.
T Consensus       234 ~s~~~~~~tG~~i~vdgG~  252 (261)
T PRK08690        234 LSDLSSGITGEITYVDGGY  252 (261)
T ss_pred             hCcccCCcceeEEEEcCCc
Confidence            98532  367888888775

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.27  E-value=3.9e-10  Score=93.67  Aligned_cols=180  Identities=17%  Similarity=0.113  Sum_probs=115.5

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-CccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi   77 (314)
                      |||+|+||.+++++|++++  ..|+...|+....   ..          ..++.++++|++|+++++++.+.. ++|++|
T Consensus         6 tGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---~~----------~~~~~~~~~Dls~~~~~~~~~~~~~~id~li   72 (235)
T PRK09009          6 VGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---FQ----------HDNVQWHALDVTDEAEIKQLSEQFTQLDWLI   72 (235)
T ss_pred             ECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---cc----------cCceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            7999999999999999985  5666556644321   11          256888999999998877765433 689999


Q ss_pred             EcCCCCcc------------------------------cHHHHHHhCC--CCCcEEEEeece-eeccCCCCCccCccccc
Q 021331           78 DINGREAD------------------------------EVEPILDALP--NLEQFIYCSSAG-VYLKSDLLPHCESRHKG  124 (314)
Q Consensus        78 ~~a~~~~~------------------------------~~~~~~~~~~--~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~  124 (314)
                      |++|....                              .++.++..+.  +..+++++||.. ...... .+....|+.+
T Consensus        73 ~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~-~~~~~~Y~as  151 (235)
T PRK09009         73 NCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNR-LGGWYSYRAS  151 (235)
T ss_pred             ECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCC-CCCcchhhhh
Confidence            99987421                              0123334344  345788888732 111111 1111268889


Q ss_pred             hhhHHHHHHh---------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHH
Q 021331          125 KLNTESVLES---------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  195 (314)
Q Consensus       125 k~~~e~~~~~---------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  195 (314)
                      |...+.+.+.         .++.+..+.||.+..+....         .....         ....+...+|+|+++..+
T Consensus       152 K~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~---------~~~~~---------~~~~~~~~~~~a~~~~~l  213 (235)
T PRK09009        152 KAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP---------FQQNV---------PKGKLFTPEYVAQCLLGI  213 (235)
T ss_pred             HHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc---------hhhcc---------ccCCCCCHHHHHHHHHHH
Confidence            9888877642         36788889999887763211         00111         112356789999999999


Q ss_pred             hcCCc--cCCceEEecCCc
Q 021331          196 LGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       196 l~~~~--~~~~~~~i~~~~  212 (314)
                      +..+.  ..|..+.+.++.
T Consensus       214 ~~~~~~~~~g~~~~~~g~~  232 (235)
T PRK09009        214 IANATPAQSGSFLAYDGET  232 (235)
T ss_pred             HHcCChhhCCcEEeeCCcC
Confidence            98753  256666665543

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.27  E-value=7e-11  Score=98.95  Aligned_cols=173  Identities=13%  Similarity=0.122  Sum_probs=109.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecCC--ChhhHHHhhhcC-----C
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRK--DYDFVKSSLSAK-----G   72 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~--d~~~l~~~~~~~-----~   72 (314)
                      |||+|+||.+++++|++.|++|++++|+.........     ++.+. ..++.++.+|++  +++++.++++..     .
T Consensus        18 tG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~   92 (247)
T PRK08945         18 TGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYD-----EIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGR   92 (247)
T ss_pred             eCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHH-----HHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCC
Confidence            7999999999999999999999999998754321111     11111 235677888886  555554444321     6


Q ss_pred             ccEEEEcCCCCc---------------------ccHHHHHH----hCC--CCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           73 FDVVYDINGREA---------------------DEVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        73 ~d~vi~~a~~~~---------------------~~~~~~~~----~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      +|+|||+|+...                     .++.++++    .+.  +..+||++||.......   +....|+.+|
T Consensus        93 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~---~~~~~Y~~sK  169 (247)
T PRK08945         93 LDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGR---ANWGAYAVSK  169 (247)
T ss_pred             CCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCC---CCCcccHHHH
Confidence            899999987521                     11222333    333  56789999996543221   2223689999


Q ss_pred             hhHHHHHHh-------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          126 LNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       126 ~~~e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      ...+.+++.       .+++++.++|+.+-++...         ......      .   ...+...+|++++++.++.+
T Consensus       170 ~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~---------~~~~~~------~---~~~~~~~~~~~~~~~~~~~~  231 (247)
T PRK08945        170 FATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRA---------SAFPGE------D---PQKLKTPEDIMPLYLYLMGD  231 (247)
T ss_pred             HHHHHHHHHHHHHhcccCEEEEEEecCCccCcchh---------hhcCcc------c---ccCCCCHHHHHHHHHHHhCc
Confidence            888887642       3678888999876554110         000000      0   11356789999999998865


Q ss_pred             C
Q 021331          199 E  199 (314)
Q Consensus       199 ~  199 (314)
                      +
T Consensus       232 ~  232 (247)
T PRK08945        232 D  232 (247)
T ss_pred             c
Confidence            4

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.27  E-value=2.7e-10  Score=96.64  Aligned_cols=195  Identities=13%  Similarity=0.153  Sum_probs=121.6

Q ss_pred             CCccc--ccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||++  .||.++++.|+++|++|++.+|+..... .+.     .+.+......++.+|++|+++++.+++..     .+
T Consensus        13 TGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~-~~~-----~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (271)
T PRK06505         13 MGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGK-RVK-----PLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGKL   86 (271)
T ss_pred             eCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHH-HHH-----HHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            79986  9999999999999999999888642211 010     11110122346889999999888877542     68


Q ss_pred             cEEEEcCCCCcc------------------------c----HHHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           74 DVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        74 d~vi~~a~~~~~------------------------~----~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      |++||+||....                        +    ++.++..+....++|++||......   .|....|..+|
T Consensus        87 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~---~~~~~~Y~asK  163 (271)
T PRK06505         87 DFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRV---MPNYNVMGVAK  163 (271)
T ss_pred             CEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcccc---CCccchhhhhH
Confidence            999999985320                        0    1222333333358999998654321   22223688899


Q ss_pred             hhHHHHHH-------hcCCceEEEecCeeeCCCCCCc-hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          126 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       126 ~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      ...+.+.+       .+|+++..|.||.+-.+..... -............  ++       ..+...+|+|++++.++.
T Consensus       164 aAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~--p~-------~r~~~peeva~~~~fL~s  234 (271)
T PRK06505        164 AALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNS--PL-------RRTVTIDEVGGSALYLLS  234 (271)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcC--Cc-------cccCCHHHHHHHHHHHhC
Confidence            88776653       3579999999999876531110 0001111111111  11       134568999999999987


Q ss_pred             CCc--cCCceEEecCCcc
Q 021331          198 NEK--ASRQVFNISGEKY  213 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~~  213 (314)
                      ...  ..|..+.+.++..
T Consensus       235 ~~~~~itG~~i~vdgG~~  252 (271)
T PRK06505        235 DLSSGVTGEIHFVDSGYN  252 (271)
T ss_pred             ccccccCceEEeecCCcc
Confidence            532  2678888887753

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.25  E-value=3e-10  Score=98.41  Aligned_cols=145  Identities=14%  Similarity=0.064  Sum_probs=98.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+||.++++.|+++|++|++++|+.++......     .+...  ..++.++.+|+.|.++++++++..     .+
T Consensus        20 TGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~-----~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~i   94 (313)
T PRK05854         20 TGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVA-----AIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPI   94 (313)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            7999999999999999999999999998764321111     11111  135889999999999888777532     58


Q ss_pred             cEEEEcCCCCcc-------------------c----HHHHHHhCC-CCCcEEEEeeceee-ccCCC--------CCccCc
Q 021331           74 DVVYDINGREAD-------------------E----VEPILDALP-NLEQFIYCSSAGVY-LKSDL--------LPHCES  120 (314)
Q Consensus        74 d~vi~~a~~~~~-------------------~----~~~~~~~~~-~~~~~i~~Ss~~v~-~~~~~--------~~~~e~  120 (314)
                      |++||+||....                   +    ++.++..+. +..++|++||...+ +....        .+....
T Consensus        95 D~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  174 (313)
T PRK05854         95 HLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYAGMRA  174 (313)
T ss_pred             cEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCcchhh
Confidence            999999986311                   0    223343343 44689999986543 21110        011126


Q ss_pred             cccchhhHHHHHHh---------cCCceEEEecCeeeCC
Q 021331          121 RHKGKLNTESVLES---------KGVNWTSLRPVYIYGP  150 (314)
Q Consensus       121 ~~~~k~~~e~~~~~---------~~~~~~ilR~~~v~g~  150 (314)
                      |+.+|...+.+.++         .++.+..+.||.+-.+
T Consensus       175 Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~  213 (313)
T PRK05854        175 YSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN  213 (313)
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence            88999877666531         3689999999998665

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.24  E-value=4e-10  Score=95.10  Aligned_cols=194  Identities=14%  Similarity=0.121  Sum_probs=120.0

Q ss_pred             CCccc--ccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||++  .||.++++.|+++|++|++.+|+... ....     +.+......+.++.+|++|+++++++++..     .+
T Consensus        12 TGas~~~GIG~aia~~la~~G~~vil~~r~~~~-~~~~-----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   85 (262)
T PRK07984         12 TGVASKLSIAYGIAQAMHREGAELAFTYQNDKL-KGRV-----EEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPKF   85 (262)
T ss_pred             eCCCCCccHHHHHHHHHHHCCCEEEEEecchhH-HHHH-----HHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCCC
Confidence            68875  89999999999999999988876311 1101     011111234667899999999888877532     48


Q ss_pred             cEEEEcCCCCcc--------------c---------------HHHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccc
Q 021331           74 DVVYDINGREAD--------------E---------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKG  124 (314)
Q Consensus        74 d~vi~~a~~~~~--------------~---------------~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (314)
                      |++||+||....              .               ++.++..+....++|++||.+...   ..|....|+.+
T Consensus        86 D~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~---~~~~~~~Y~as  162 (262)
T PRK07984         86 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER---AIPNYNVMGLA  162 (262)
T ss_pred             CEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC---CCCCcchhHHH
Confidence            999999985311              0               111222122335789999865432   12223368899


Q ss_pred             hhhHHHHHH-------hcCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          125 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       125 k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      |...+.+.+       .+++++..+.||.+-.+.... +-............+         ...+...+|++++++.++
T Consensus       163 Kaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedva~~~~~L~  233 (262)
T PRK07984        163 KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTP---------IRRTVTIEDVGNSAAFLC  233 (262)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCC---------CcCCCCHHHHHHHHHHHc
Confidence            988877764       357999999999876541100 000111111111111         123567899999999999


Q ss_pred             cCCc--cCCceEEecCCc
Q 021331          197 GNEK--ASRQVFNISGEK  212 (314)
Q Consensus       197 ~~~~--~~~~~~~i~~~~  212 (314)
                      ....  ..|..+.+.++.
T Consensus       234 s~~~~~itG~~i~vdgg~  251 (262)
T PRK07984        234 SDLSAGISGEVVHVDGGF  251 (262)
T ss_pred             CcccccccCcEEEECCCc
Confidence            7632  367788887764

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.24  E-value=3.3e-10  Score=95.61  Aligned_cols=194  Identities=11%  Similarity=0.059  Sum_probs=119.5

Q ss_pred             CCccc--ccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||++  .||.++++.|.++|++|++.+|+... ...+.     .+........++.+|++|+++++++++..     ++
T Consensus        14 TGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~-~~~~~-----~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   87 (260)
T PRK06603         14 TGIANNMSISWAIAQLAKKHGAELWFTYQSEVL-EKRVK-----PLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSF   87 (260)
T ss_pred             ECCCCCcchHHHHHHHHHHcCCEEEEEeCchHH-HHHHH-----HHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            79986  89999999999999999988876321 11110     11111122345789999999888877532     58


Q ss_pred             cEEEEcCCCCc---------c----c---------------HHHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           74 DVVYDINGREA---------D----E---------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        74 d~vi~~a~~~~---------~----~---------------~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      |++||+++...         .    .               ++.++..+....++|++||......   .|....|+.+|
T Consensus        88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~---~~~~~~Y~asK  164 (260)
T PRK06603         88 DFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKV---IPNYNVMGVAK  164 (260)
T ss_pred             cEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccC---CCcccchhhHH
Confidence            99999987521         0    0               1112222333358999998654321   22223689999


Q ss_pred             hhHHHHHH-------hcCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          126 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       126 ~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      ...+.+.+       .+++.+..+.||.+-.+.... .-............+         ...+...+|+|++++.++.
T Consensus       165 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedva~~~~~L~s  235 (260)
T PRK06603        165 AALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAP---------LKRNTTQEDVGGAAVYLFS  235 (260)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCC---------cCCCCCHHHHHHHHHHHhC
Confidence            88777653       367999999999886652110 000111111111111         1235678999999999998


Q ss_pred             CCc--cCCceEEecCCc
Q 021331          198 NEK--ASRQVFNISGEK  212 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~  212 (314)
                      ...  ..|..+.+.++.
T Consensus       236 ~~~~~itG~~i~vdgG~  252 (260)
T PRK06603        236 ELSKGVTGEIHYVDCGY  252 (260)
T ss_pred             cccccCcceEEEeCCcc
Confidence            532  367788887764

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.24  E-value=3.8e-10  Score=95.12  Aligned_cols=194  Identities=12%  Similarity=0.075  Sum_probs=121.3

Q ss_pred             CCcc--cccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+  +.||.++++.|+++|++|++++|+..... .+.     .+.+......++.+|++|++++.++++..     .+
T Consensus        16 tGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~-----~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~l   89 (258)
T PRK07533         16 VGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVE-----PLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGRL   89 (258)
T ss_pred             ECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHH-----HHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCCC
Confidence            6887  59999999999999999999988753211 000     11111123567899999999888776532     58


Q ss_pred             cEEEEcCCCCcc-------------c---------------HHHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           74 DVVYDINGREAD-------------E---------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        74 d~vi~~a~~~~~-------------~---------------~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      |++||+||....             .               ++.++..+....++|++||......   .+....|+.+|
T Consensus        90 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~---~~~~~~Y~asK  166 (258)
T PRK07533         90 DFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKV---VENYNLMGPVK  166 (258)
T ss_pred             CEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccC---CccchhhHHHH
Confidence            999999986321             0               2223333443357899998654211   22223588889


Q ss_pred             hhHHHHHH-------hcCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          126 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       126 ~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      ...+.+.+       .+++.+..+.||.+-.+-... ..............  +       ...+...+|+|++++.++.
T Consensus       167 aal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--p-------~~r~~~p~dva~~~~~L~s  237 (258)
T PRK07533        167 AALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERA--P-------LRRLVDIDDVGAVAAFLAS  237 (258)
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcC--C-------cCCCCCHHHHHHHHHHHhC
Confidence            88766653       357999999999886652111 00111112221111  1       1235678999999999987


Q ss_pred             CC--ccCCceEEecCCc
Q 021331          198 NE--KASRQVFNISGEK  212 (314)
Q Consensus       198 ~~--~~~~~~~~i~~~~  212 (314)
                      ..  ...|..+.+.++.
T Consensus       238 ~~~~~itG~~i~vdgg~  254 (258)
T PRK07533        238 DAARRLTGNTLYIDGGY  254 (258)
T ss_pred             hhhccccCcEEeeCCcc
Confidence            63  2367788887764

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.23  E-value=4.5e-10  Score=94.59  Aligned_cols=194  Identities=10%  Similarity=0.070  Sum_probs=121.0

Q ss_pred             CCcc--cccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh-c-cCceEEEEecCCChhhHHHhhhc----C-
Q 021331            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKDYDFVKSSLSA----K-   71 (314)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~D~~d~~~l~~~~~~----~-   71 (314)
                      |||+  +.||.++++.|+++|++|++++|+.... ..+.     ++.+ . ..++.++.+|++|++++++++++    . 
T Consensus        13 tGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~-~~~~-----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   86 (257)
T PRK08594         13 MGVANKRSIAWGIARSLHNAGAKLVFTYAGERLE-KEVR-----ELADTLEGQESLLLPCDVTSDEEITACFETIKEEVG   86 (257)
T ss_pred             ECCCCCCCHHHHHHHHHHHCCCEEEEecCcccch-HHHH-----HHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCC
Confidence            6886  8999999999999999999988753211 0010     0100 0 24678899999999988877753    2 


Q ss_pred             CccEEEEcCCCCcc----c------------------------HHHHHHhCCCCCcEEEEeeceeeccCCCCCccCcccc
Q 021331           72 GFDVVYDINGREAD----E------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHK  123 (314)
Q Consensus        72 ~~d~vi~~a~~~~~----~------------------------~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (314)
                      .+|++||++|....    .                        ++.++..+....++|++||....-.   .|....|+.
T Consensus        87 ~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~---~~~~~~Y~a  163 (257)
T PRK08594         87 VIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERV---VQNYNVMGV  163 (257)
T ss_pred             CccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccC---CCCCchhHH
Confidence            48999999885310    0                        1123333333468999998654321   122236899


Q ss_pred             chhhHHHHHH-------hcCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHH
Q 021331          124 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  195 (314)
Q Consensus       124 ~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  195 (314)
                      +|...+.+.+       .+|+++..|.||.+-.+.... .-...........  .       ....+...+|+|++++.+
T Consensus       164 sKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~-------p~~r~~~p~~va~~~~~l  234 (257)
T PRK08594        164 AKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEER--A-------PLRRTTTQEEVGDTAAFL  234 (257)
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhc--C-------CccccCCHHHHHHHHHHH
Confidence            9988877764       357999999999886652100 0000111111110  1       112356789999999999


Q ss_pred             hcCCc--cCCceEEecCCc
Q 021331          196 LGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       196 l~~~~--~~~~~~~i~~~~  212 (314)
                      +....  ..|..+.+.++.
T Consensus       235 ~s~~~~~~tG~~~~~dgg~  253 (257)
T PRK08594        235 FSDLSRGVTGENIHVDSGY  253 (257)
T ss_pred             cCcccccccceEEEECCch
Confidence            87532  367778887763

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.23  E-value=2.4e-10  Score=96.24  Aligned_cols=193  Identities=16%  Similarity=0.169  Sum_probs=119.6

Q ss_pred             CCc--ccccHHHHHHHHHHCCCeEEEEEcCCc-ccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-----CC
Q 021331            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKA-PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KG   72 (314)
Q Consensus         1 tGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-----~~   72 (314)
                      |||  ++.||.++++.|+++|++|++++|+.. .....+.       .+....+.++.+|++|+++++++++.     -+
T Consensus        13 tGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~-------~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889         13 TGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIA-------KRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             eCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHH-------HhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            688  899999999999999999999987642 1111110       00113577899999999988877653     25


Q ss_pred             ccEEEEcCCCCcc-------------c---------------HHHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccc
Q 021331           73 FDVVYDINGREAD-------------E---------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKG  124 (314)
Q Consensus        73 ~d~vi~~a~~~~~-------------~---------------~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (314)
                      +|++||+||....             .               ++.++..+....++|++|+.+..    ..|....|+.+
T Consensus        86 iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~----~~~~~~~Y~as  161 (256)
T PRK07889         86 LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATV----AWPAYDWMGVA  161 (256)
T ss_pred             CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccc----cCCccchhHHH
Confidence            8999999986421             0               12233333333578888764321    12222247888


Q ss_pred             hhhHHHHHH-------hcCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          125 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       125 k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      |...+.+.+       .+|+++..+.||.+-.+.... +-.......+....  ++      .+.+...+|+|++++.++
T Consensus       162 Kaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--p~------~~~~~~p~evA~~v~~l~  233 (256)
T PRK07889        162 KAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERA--PL------GWDVKDPTPVARAVVALL  233 (256)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcC--cc------ccccCCHHHHHHHHHHHh
Confidence            887766653       367999999999887652110 00011111111111  11      013567899999999999


Q ss_pred             cCCc--cCCceEEecCCc
Q 021331          197 GNEK--ASRQVFNISGEK  212 (314)
Q Consensus       197 ~~~~--~~~~~~~i~~~~  212 (314)
                      ....  ..|.++.+.++.
T Consensus       234 s~~~~~~tG~~i~vdgg~  251 (256)
T PRK07889        234 SDWFPATTGEIVHVDGGA  251 (256)
T ss_pred             CcccccccceEEEEcCce
Confidence            7632  367778887664

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.23  E-value=3.2e-10  Score=96.32  Aligned_cols=193  Identities=12%  Similarity=0.110  Sum_probs=121.0

Q ss_pred             CCcc--cccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhh-hhccCceEEEEecCCChhhHHHhhhcC-----C
Q 021331            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (314)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~   72 (314)
                      |||+  +.||.++++.|+++|++|++++|+... ...+.     .+ .+.... .++.+|++|++++.++++..     .
T Consensus        11 tGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~-~~~~~-----~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g~   83 (274)
T PRK08415         11 VGVANNKSIAYGIAKACFEQGAELAFTYLNEAL-KKRVE-----PIAQELGSD-YVYELDVSKPEHFKSLAESLKKDLGK   83 (274)
T ss_pred             ECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH-HHHHH-----HHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            6886  799999999999999999999887421 00010     11 111123 57889999999888777532     5


Q ss_pred             ccEEEEcCCCCcc----c------------------------HHHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccc
Q 021331           73 FDVVYDINGREAD----E------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKG  124 (314)
Q Consensus        73 ~d~vi~~a~~~~~----~------------------------~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (314)
                      +|++||+||....    .                        ++.++..+....++|++||......   .|....|..+
T Consensus        84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~---~~~~~~Y~as  160 (274)
T PRK08415         84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKY---VPHYNVMGVA  160 (274)
T ss_pred             CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccC---CCcchhhhhH
Confidence            8999999986310    0                        2334444443468999998643321   2222358888


Q ss_pred             hhhHHHHHH-------hcCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          125 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       125 k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      |...+.+.+       .+|+.+..+.||.+..+.... .-.........  ...+       ...+...+|+|++++.++
T Consensus       161 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~p-------l~r~~~pedva~~v~fL~  231 (274)
T PRK08415        161 KAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNE--INAP-------LKKNVSIEEVGNSGMYLL  231 (274)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhh--hhCc-------hhccCCHHHHHHHHHHHh
Confidence            988766653       357999999999887652110 00000000000  0011       123567899999999999


Q ss_pred             cCC--ccCCceEEecCCc
Q 021331          197 GNE--KASRQVFNISGEK  212 (314)
Q Consensus       197 ~~~--~~~~~~~~i~~~~  212 (314)
                      ...  ...|..+.+.++.
T Consensus       232 s~~~~~itG~~i~vdGG~  249 (274)
T PRK08415        232 SDLSSGVTGEIHYVDAGY  249 (274)
T ss_pred             hhhhhcccccEEEEcCcc
Confidence            753  2367888888875

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.22  E-value=4.4e-10  Score=95.43  Aligned_cols=195  Identities=11%  Similarity=0.123  Sum_probs=120.6

Q ss_pred             CCcc--cccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+  +.||.++++.|+++|++|+++.|+... ...+.     .+.+.......+.+|++|+++++++++..     .+
T Consensus        16 tGas~~~GIG~aia~~la~~G~~V~l~~r~~~~-~~~~~-----~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   89 (272)
T PRK08159         16 LGVANNRSIAWGIAKACRAAGAELAFTYQGDAL-KKRVE-----PLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGKL   89 (272)
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH-HHHHH-----HHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            6886  899999999999999999988775321 11010     11111123557899999999888877542     58


Q ss_pred             cEEEEcCCCCcc------------------------c----HHHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           74 DVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        74 d~vi~~a~~~~~------------------------~----~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      |++||+||....                        +    ++.++..+.+..++|++||.+...   ..|....|+.+|
T Consensus        90 D~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~---~~p~~~~Y~asK  166 (272)
T PRK08159         90 DFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK---VMPHYNVMGVAK  166 (272)
T ss_pred             cEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc---CCCcchhhhhHH
Confidence            999999985310                        0    122223333346899999865432   123333688999


Q ss_pred             hhHHHHHH-------hcCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          126 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       126 ~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      ...+.+.+       .+++++..+.||.+..+.... .-.... ..... ...+       ...+...+|+|++++.++.
T Consensus       167 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~-~~~~~-~~~p-------~~r~~~peevA~~~~~L~s  237 (272)
T PRK08159        167 AALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYI-LKWNE-YNAP-------LRRTVTIEEVGDSALYLLS  237 (272)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHH-HHHHH-hCCc-------ccccCCHHHHHHHHHHHhC
Confidence            88777653       357999999999876541100 000000 00000 0111       1235678999999999997


Q ss_pred             CCc--cCCceEEecCCcc
Q 021331          198 NEK--ASRQVFNISGEKY  213 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~~  213 (314)
                      ...  ..|..+.+.++..
T Consensus       238 ~~~~~itG~~i~vdgG~~  255 (272)
T PRK08159        238 DLSRGVTGEVHHVDSGYH  255 (272)
T ss_pred             ccccCccceEEEECCCce
Confidence            532  3678888888853

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.21  E-value=2.4e-10  Score=95.37  Aligned_cols=158  Identities=14%  Similarity=0.070  Sum_probs=99.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||+|+||.++++.|+++|++|++++|+.........          ......+.+|++|.+++.+.+.  ++|++||+|
T Consensus        20 TGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~--~iDilVnnA   87 (245)
T PRK12367         20 TGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND----------ESPNEWIKWECGKEESLDKQLA--SLDVLILNH   87 (245)
T ss_pred             EcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc----------cCCCeEEEeeCCCHHHHHHhcC--CCCEEEECC
Confidence            7999999999999999999999999987632111110          0123567899999999998887  899999999


Q ss_pred             CCCc-----------------ccHHHHHH----hCCC-----CCcEEEEeeceeeccCCCCCccCccccchhhHHHHH--
Q 021331           81 GREA-----------------DEVEPILD----ALPN-----LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVL--  132 (314)
Q Consensus        81 ~~~~-----------------~~~~~~~~----~~~~-----~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~--  132 (314)
                      |...                 .+...+++    .+..     ...++..||.......    ....|+.+|...+.+.  
T Consensus        88 G~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~~----~~~~Y~aSKaal~~~~~l  163 (245)
T PRK12367         88 GINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQPA----LSPSYEISKRLIGQLVSL  163 (245)
T ss_pred             ccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCCC----CCchhHHHHHHHHHHHHH
Confidence            8631                 11222333    2321     2224444443332221    1235999998764322  


Q ss_pred             -H-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          133 -E-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       133 -~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                       +       ..++.+..+.|+.+..+     +           .+          ...+..+|+|+.++..+.++.
T Consensus       164 ~~~l~~e~~~~~i~v~~~~pg~~~t~-----~-----------~~----------~~~~~~~~vA~~i~~~~~~~~  213 (245)
T PRK12367        164 KKNLLDKNERKKLIIRKLILGPFRSE-----L-----------NP----------IGIMSADFVAKQILDQANLGL  213 (245)
T ss_pred             HHHHHHhhcccccEEEEecCCCcccc-----c-----------Cc----------cCCCCHHHHHHHHHHHHhcCC
Confidence             1       24666777777653222     1           00          124678999999999987654

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.20  E-value=8.4e-11  Score=99.02  Aligned_cols=185  Identities=14%  Similarity=0.071  Sum_probs=112.2

Q ss_pred             CCcccccHHHHHHHHHH----CCCeEEEEEcCCcccccCCCCCCchhhhh--ccCceEEEEecCCChhhHHHhhhcC---
Q 021331            1 MGGTRFIGVFLSRLLVK----EGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK---   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~l~~~~~~~---   71 (314)
                      |||+|.||.+++++|.+    .|++|++++|+.+......     .++..  ...++.++.+|++|+++++++++..   
T Consensus         6 tGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         6 TGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLK-----AEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             ecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHH-----HHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            79999999999999997    7999999999865432111     01111  0236788999999998888776521   


Q ss_pred             ------CccEEEEcCCCCc------c---c------------------HHHHHHhCC-C---CCcEEEEeeceeeccCCC
Q 021331           72 ------GFDVVYDINGREA------D---E------------------VEPILDALP-N---LEQFIYCSSAGVYLKSDL  114 (314)
Q Consensus        72 ------~~d~vi~~a~~~~------~---~------------------~~~~~~~~~-~---~~~~i~~Ss~~v~~~~~~  114 (314)
                            +.|++||+||...      .   .                  ++.++..+. .   ..++|++||...+...  
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~--  158 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPF--  158 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCC--
Confidence                  2368999998521      0   0                  123333333 1   2579999997654321  


Q ss_pred             CCccCccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHH
Q 021331          115 LPHCESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  187 (314)
Q Consensus       115 ~~~~e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  187 (314)
                       |....|+.+|...+.+.+       ..++.++.+.||.+-.+.     .........................+...+|
T Consensus       159 -~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e  232 (256)
T TIGR01500       159 -KGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDM-----QQQVREESVDPDMRKGLQELKAKGKLVDPKV  232 (256)
T ss_pred             -CCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchH-----HHHHHHhcCChhHHHHHHHHHhcCCCCCHHH
Confidence             222368999988877764       257889999999876541     1111100000000000000001123677899


Q ss_pred             HHHHHHHHhcC
Q 021331          188 LARAFVQVLGN  198 (314)
Q Consensus       188 ~a~~~~~~l~~  198 (314)
                      +|++++.++.+
T Consensus       233 va~~~~~l~~~  243 (256)
T TIGR01500       233 SAQKLLSLLEK  243 (256)
T ss_pred             HHHHHHHHHhc
Confidence            99999999964

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.20  E-value=2e-10  Score=95.78  Aligned_cols=178  Identities=12%  Similarity=0.103  Sum_probs=114.1

Q ss_pred             HHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC--CccEEEEcCCCC-----
Q 021331           11 LSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYDINGRE-----   83 (314)
Q Consensus        11 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~--~~d~vi~~a~~~-----   83 (314)
                      +++.|+++|++|++++|+.+..                ....++.+|++|.+++.+++++.  ++|++||+||..     
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~----------------~~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~   64 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGM----------------TLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPV   64 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchh----------------hhhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCH
Confidence            4788999999999999986542                11346789999999999988753  689999999863     


Q ss_pred             -------cccHHHHHHh----CCCCCcEEEEeeceeeccCC------------------------CCCccCccccchhhH
Q 021331           84 -------ADEVEPILDA----LPNLEQFIYCSSAGVYLKSD------------------------LLPHCESRHKGKLNT  128 (314)
Q Consensus        84 -------~~~~~~~~~~----~~~~~~~i~~Ss~~v~~~~~------------------------~~~~~e~~~~~k~~~  128 (314)
                             ..++..+.+.    +....++|++||...++...                        ..+....|+.+|...
T Consensus        65 ~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~  144 (241)
T PRK12428         65 ELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEAL  144 (241)
T ss_pred             HHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHH
Confidence                   2223333333    33346999999988775211                        112223689999887


Q ss_pred             HHHH--------HhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          129 ESVL--------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       129 e~~~--------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      +.+.        ..+|++++.|+||.+.++.... ..............  .     ....+...+|+|++++.++....
T Consensus       145 ~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~--~-----~~~~~~~pe~va~~~~~l~s~~~  216 (241)
T PRK12428        145 ILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGD-FRSMLGQERVDSDA--K-----RMGRPATADEQAAVLVFLCSDAA  216 (241)
T ss_pred             HHHHHHHHHHhhhccCeEEEEeecCCccCccccc-chhhhhhHhhhhcc--c-----ccCCCCCHHHHHHHHHHHcChhh
Confidence            6543        2357999999999998873211 11000000000000  0     11235678999999999886532


Q ss_pred             --cCCceEEecCCc
Q 021331          201 --ASRQVFNISGEK  212 (314)
Q Consensus       201 --~~~~~~~i~~~~  212 (314)
                        ..|..+.+.++.
T Consensus       217 ~~~~G~~i~vdgg~  230 (241)
T PRK12428        217 RWINGVNLPVDGGL  230 (241)
T ss_pred             cCccCcEEEecCch
Confidence              256777777664

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.19  E-value=2e-11  Score=101.91  Aligned_cols=193  Identities=23%  Similarity=0.305  Sum_probs=126.8

Q ss_pred             Ccc--cccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc------CCc
Q 021331            2 GGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGF   73 (314)
Q Consensus         2 Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~------~~~   73 (314)
                      |++  +.||.++++.|+++|++|++++|+.+.....+.     ++.+ ..+.+++.+|++++++++.+++.      -++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~-----~l~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~i   74 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALE-----ELAK-EYGAEVIQCDLSDEESVEALFDEAVERFGGRI   74 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHH-----HHHH-HTTSEEEESCTTSHHHHHHHHHHHHHHHCSSE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-----HHHH-HcCCceEeecCcchHHHHHHHHHHHhhcCCCe
Confidence            566  999999999999999999999999876321111     1111 12344799999999888887653      368


Q ss_pred             cEEEEcCCCCcc----c------------------------HHHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           74 DVVYDINGREAD----E------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        74 d~vi~~a~~~~~----~------------------------~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      |++||+++....    .                        .+.++..+....++|++||......   .|....|..+|
T Consensus        75 D~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~---~~~~~~y~~sK  151 (241)
T PF13561_consen   75 DILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRP---MPGYSAYSASK  151 (241)
T ss_dssp             SEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSB---STTTHHHHHHH
T ss_pred             EEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhccc---CccchhhHHHH
Confidence            999999876432    0                        2223333334468999998754322   22222688888


Q ss_pred             hhHHHHHH-------h-cCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          126 LNTESVLE-------S-KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       126 ~~~e~~~~-------~-~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      ...+.+.+       . +|+++..|.||.+..+.... .....+........++         ..+...+|+|.+++.++
T Consensus       152 aal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl---------~r~~~~~evA~~v~fL~  222 (241)
T PF13561_consen  152 AALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPL---------GRLGTPEEVANAVLFLA  222 (241)
T ss_dssp             HHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTT---------SSHBEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhcc---------CCCcCHHHHHHHHHHHh
Confidence            88777653       4 78999999999887652100 0012233333322222         13557999999999999


Q ss_pred             cCC--ccCCceEEecCCc
Q 021331          197 GNE--KASRQVFNISGEK  212 (314)
Q Consensus       197 ~~~--~~~~~~~~i~~~~  212 (314)
                      ...  .-.|+++.+.||.
T Consensus       223 s~~a~~itG~~i~vDGG~  240 (241)
T PF13561_consen  223 SDAASYITGQVIPVDGGF  240 (241)
T ss_dssp             SGGGTTGTSEEEEESTTG
T ss_pred             CccccCccCCeEEECCCc
Confidence            864  3378899998874

...

>PLN00015 protochlorophyllide reductase

Probab=99.18  E-value=3.8e-10  Score=97.62  Aligned_cols=186  Identities=14%  Similarity=0.083  Sum_probs=112.0

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||++.||.+++++|+++| ++|++++|+.+.......     .+......+.++.+|+.|.++++++++..     .+|
T Consensus         3 TGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD   77 (308)
T PLN00015          3 TGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAK-----SAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLD   77 (308)
T ss_pred             eCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-----HhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCC
Confidence            7999999999999999999 999999987654221110     11111246788899999999888777532     589


Q ss_pred             EEEEcCCCCcc----------c---------------HHHHHHhCC--C--CCcEEEEeeceeeccC-----C-------
Q 021331           75 VVYDINGREAD----------E---------------VEPILDALP--N--LEQFIYCSSAGVYLKS-----D-------  113 (314)
Q Consensus        75 ~vi~~a~~~~~----------~---------------~~~~~~~~~--~--~~~~i~~Ss~~v~~~~-----~-------  113 (314)
                      ++||+||....          .               ++.++..+.  +  ..++|++||...+-..     .       
T Consensus        78 ~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~  157 (308)
T PLN00015         78 VLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGD  157 (308)
T ss_pred             EEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhh
Confidence            99999986310          0               233444443  2  4699999996543110     0       


Q ss_pred             ------------------CC--CccCccccchhhHHHH----HHh----cCCceEEEecCeeeCCCCCCchhHHHHHHHH
Q 021331          114 ------------------LL--PHCESRHKGKLNTESV----LES----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK  165 (314)
Q Consensus       114 ------------------~~--~~~e~~~~~k~~~e~~----~~~----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~  165 (314)
                                        ..  +....|..+|.....+    .++    .++.++.++||.|............. ....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~-~~~~  236 (308)
T PLN00015        158 LRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLF-RLLF  236 (308)
T ss_pred             hhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHH-HHHH
Confidence                              00  0112588999874333    222    47899999999986432111111110 1000


Q ss_pred             cCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          166 AGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       166 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      . .....+.     ..+...++.|+.++.++..
T Consensus       237 ~-~~~~~~~-----~~~~~pe~~a~~~~~l~~~  263 (308)
T PLN00015        237 P-PFQKYIT-----KGYVSEEEAGKRLAQVVSD  263 (308)
T ss_pred             H-HHHHHHh-----cccccHHHhhhhhhhhccc
Confidence            0 0000000     1246789999999988865

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.17  E-value=1.1e-09  Score=92.36  Aligned_cols=194  Identities=13%  Similarity=0.138  Sum_probs=119.3

Q ss_pred             CCc--ccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||  ++.||.++++.|+++|++|++++|...... .+.     .+.........+.+|++|++++.++++..     ++
T Consensus        12 tGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (260)
T PRK06997         12 TGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKD-RIT-----EFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDGL   85 (260)
T ss_pred             eCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHH-HHH-----HHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCCC
Confidence            675  679999999999999999998865421100 000     11110122346889999999888877532     58


Q ss_pred             cEEEEcCCCCcc--------------c---------------HHHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccc
Q 021331           74 DVVYDINGREAD--------------E---------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKG  124 (314)
Q Consensus        74 d~vi~~a~~~~~--------------~---------------~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (314)
                      |++||+||....              .               ++.++..+.+..++|++||.....   ..|....|..+
T Consensus        86 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~---~~~~~~~Y~as  162 (260)
T PRK06997         86 DGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER---VVPNYNTMGLA  162 (260)
T ss_pred             cEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc---CCCCcchHHHH
Confidence            999999986310              0               122333344346899999865432   12222368899


Q ss_pred             hhhHHHHHH-------hcCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          125 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       125 k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      |...+.+.+       .+++++..+.||.+-.+...... .......+...  .+       ...+...+|++++++.++
T Consensus       163 Kaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~--~p-------~~r~~~pedva~~~~~l~  233 (260)
T PRK06997        163 KASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESN--AP-------LRRNVTIEEVGNVAAFLL  233 (260)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhc--Cc-------ccccCCHHHHHHHHHHHh
Confidence            988777653       35799999999988664211000 01111111111  11       123567899999999999


Q ss_pred             cCC--ccCCceEEecCCc
Q 021331          197 GNE--KASRQVFNISGEK  212 (314)
Q Consensus       197 ~~~--~~~~~~~~i~~~~  212 (314)
                      ..+  ...|.++.+.++.
T Consensus       234 s~~~~~itG~~i~vdgg~  251 (260)
T PRK06997        234 SDLASGVTGEITHVDSGF  251 (260)
T ss_pred             CccccCcceeEEEEcCCh
Confidence            763  2367788887764

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.17  E-value=3.2e-10  Score=103.41  Aligned_cols=190  Identities=18%  Similarity=0.172  Sum_probs=117.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|.||..+++.|.++|++|++++++.....  +.     ...+ ..+..++.+|++|++++..+++..     ++|+
T Consensus       216 tGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~--l~-----~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        216 TGAARGIGAAIAEVLARDGAHVVCLDVPAAGEA--LA-----AVAN-RVGGTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHH--HH-----HHHH-HcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            799999999999999999999999988532210  00     0000 123467889999998888777532     5899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhCC------CCCcEEEEeeceee-ccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA--------------------DEVEPILDALP------NLEQFIYCSSAGVY-LKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~~------~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~k~~~  128 (314)
                      |||++|...                    .++.++.+++.      ...+||++||...+ +...    ...|..+|...
T Consensus       288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~----~~~Y~asKaal  363 (450)
T PRK08261        288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRG----QTNYAASKAGV  363 (450)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC----ChHHHHHHHHH
Confidence            999998532                    12223333332      33689999996543 3222    22588888865


Q ss_pred             HHHH-------HhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          129 ESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       129 e~~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      +.+.       ...++.+..+.|+.+-.+.. ..+ +........ ....+       ......+|++++++.+++... 
T Consensus       364 ~~~~~~la~el~~~gi~v~~v~PG~i~t~~~-~~~-~~~~~~~~~-~~~~l-------~~~~~p~dva~~~~~l~s~~~~  433 (450)
T PRK08261        364 IGLVQALAPLLAERGITINAVAPGFIETQMT-AAI-PFATREAGR-RMNSL-------QQGGLPVDVAETIAWLASPASG  433 (450)
T ss_pred             HHHHHHHHHHHhhhCcEEEEEEeCcCcchhh-hcc-chhHHHHHh-hcCCc-------CCCCCHHHHHHHHHHHhChhhc
Confidence            5554       24689999999998654311 101 111111111 00011       122346799999999887532 


Q ss_pred             -cCCceEEecCCc
Q 021331          201 -ASRQVFNISGEK  212 (314)
Q Consensus       201 -~~~~~~~i~~~~  212 (314)
                       ..|.++.++++.
T Consensus       434 ~itG~~i~v~g~~  446 (450)
T PRK08261        434 GVTGNVVRVCGQS  446 (450)
T ss_pred             CCCCCEEEECCCc
Confidence             257888887764

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.17  E-value=3.6e-10  Score=85.45  Aligned_cols=134  Identities=21%  Similarity=0.173  Sum_probs=101.5

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      .||||-.|+.+++++++++  .+|+++.|+...-.  ..          ...+.....|...-+++...++  ++|+.|.
T Consensus        24 lGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~--at----------~k~v~q~~vDf~Kl~~~a~~~q--g~dV~Fc   89 (238)
T KOG4039|consen   24 LGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP--AT----------DKVVAQVEVDFSKLSQLATNEQ--GPDVLFC   89 (238)
T ss_pred             EeccccccHHHHHHHHhcccceeEEEEEeccCCCc--cc----------cceeeeEEechHHHHHHHhhhc--CCceEEE
Confidence            4999999999999999998  58999988853311  11          2567777788877777777777  9999999


Q ss_pred             cCCCCc-------------ccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCc-eEEE
Q 021331           79 INGREA-------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVN-WTSL  142 (314)
Q Consensus        79 ~a~~~~-------------~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~-~~il  142 (314)
                      +.|...             .-...+.++++  +|++|+.+||.+.-..+..     .|...|.+.|.-+.+..++ ++|+
T Consensus        90 aLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~sSrF-----lY~k~KGEvE~~v~eL~F~~~~i~  164 (238)
T KOG4039|consen   90 ALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPSSRF-----LYMKMKGEVERDVIELDFKHIIIL  164 (238)
T ss_pred             eecccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCcccce-----eeeeccchhhhhhhhccccEEEEe
Confidence            876532             11334555555  8999999999887544433     4888899999998888775 9999


Q ss_pred             ecCeeeCCCCC
Q 021331          143 RPVYIYGPLNY  153 (314)
Q Consensus       143 R~~~v~g~~~~  153 (314)
                      |||.+.|..+.
T Consensus       165 RPG~ll~~R~e  175 (238)
T KOG4039|consen  165 RPGPLLGERTE  175 (238)
T ss_pred             cCcceeccccc
Confidence            99999997643

>PRK05599 hypothetical protein; Provisional

Probab=99.16  E-value=6.4e-10  Score=93.04  Aligned_cols=180  Identities=18%  Similarity=0.211  Sum_probs=115.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhcc-CceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||++.||.++++.|. +|++|++++|+.++.....     +.+.+.. ..+.++.+|+.|+++++++++..     ++|
T Consensus         6 tGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          6 LGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLA-----SDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             EeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHH-----HHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            7999999999999998 5999999999865532111     1122212 24788999999998888776532     589


Q ss_pred             EEEEcCCCCccc------------------------HHHHHHhCC-C--CCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           75 VVYDINGREADE------------------------VEPILDALP-N--LEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        75 ~vi~~a~~~~~~------------------------~~~~~~~~~-~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      ++||++|.....                        ++.++..+. .  ..++|++||...+-..   |....|+.+|..
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~---~~~~~Y~asKaa  156 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRAR---RANYVYGSTKAG  156 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCC---cCCcchhhHHHH
Confidence            999999863110                        112223332 2  3689999996543221   222368888987


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.+.+       ..++.++.+.||.+..+..         .   ...+.    .     -....+|+|++++..+..+.
T Consensus       157 ~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~---------~---~~~~~----~-----~~~~pe~~a~~~~~~~~~~~  215 (246)
T PRK05599        157 LDAFCQGLADSLHGSHVRLIIARPGFVIGSMT---------T---GMKPA----P-----MSVYPRDVAAAVVSAITSSK  215 (246)
T ss_pred             HHHHHHHHHHHhcCCCceEEEecCCcccchhh---------c---CCCCC----C-----CCCCHHHHHHHHHHHHhcCC
Confidence            766653       3578899999998765410         0   00000    0     12468999999999998754


Q ss_pred             cCCceEEecCC
Q 021331          201 ASRQVFNISGE  211 (314)
Q Consensus       201 ~~~~~~~i~~~  211 (314)
                      . +..+.+.+.
T Consensus       216 ~-~~~~~~~~~  225 (246)
T PRK05599        216 R-STTLWIPGR  225 (246)
T ss_pred             C-CceEEeCcc
Confidence            2 345555543

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.16  E-value=7.9e-10  Score=95.88  Aligned_cols=184  Identities=14%  Similarity=0.125  Sum_probs=112.6

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||++.||.++++.|+++| ++|++++|+.+.......     .+......+.++.+|++|.++++.+++..     ++|
T Consensus         9 TGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD   83 (314)
T TIGR01289         9 TGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAK-----SLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPLD   83 (314)
T ss_pred             ECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-----HhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            7999999999999999999 999999988654221110     11111245778899999998888776532     589


Q ss_pred             EEEEcCCCCcc----------c---------------HHHHHHhCC-C---CCcEEEEeeceeeccC-----------C-
Q 021331           75 VVYDINGREAD----------E---------------VEPILDALP-N---LEQFIYCSSAGVYLKS-----------D-  113 (314)
Q Consensus        75 ~vi~~a~~~~~----------~---------------~~~~~~~~~-~---~~~~i~~Ss~~v~~~~-----------~-  113 (314)
                      ++||+||....          .               ++.++..+. .   ..++|++||...+...           . 
T Consensus        84 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~  163 (314)
T TIGR01289        84 ALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGD  163 (314)
T ss_pred             EEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccccc
Confidence            99999986210          0               233344443 2   3699999997654210           0 


Q ss_pred             ----------------CCC--ccCccccchhhHHHHH----Hh----cCCceEEEecCeeeCCCC-CC--chhHHHHHHH
Q 021331          114 ----------------LLP--HCESRHKGKLNTESVL----ES----KGVNWTSLRPVYIYGPLN-YN--PVEEWFFHRL  164 (314)
Q Consensus       114 ----------------~~~--~~e~~~~~k~~~e~~~----~~----~~~~~~ilR~~~v~g~~~-~~--~~~~~~~~~~  164 (314)
                                      ..+  ....|..+|.....+.    ++    .++.++.++||.|..... ..  .....+....
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~~  243 (314)
T TIGR01289       164 LSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFPPF  243 (314)
T ss_pred             cccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHHHH
Confidence                            000  1126899998754433    22    468899999999853221 11  1111111111


Q ss_pred             HcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          165 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      ..   ...       ..+.+.++.|+.++.++..+
T Consensus       244 ~~---~~~-------~~~~~~~~~a~~l~~~~~~~  268 (314)
T TIGR01289       244 QK---YIT-------KGYVSEEEAGERLAQVVSDP  268 (314)
T ss_pred             HH---HHh-------ccccchhhhhhhhHHhhcCc
Confidence            10   000       12467889999998888753

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06484 short chain dehydrogenase; Validated

Probab=99.15  E-value=3.4e-10  Score=105.18  Aligned_cols=191  Identities=15%  Similarity=0.207  Sum_probs=120.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|.++|++|++++|+.+.......        +...++.++.+|++|++++.++++..     ++|+
T Consensus        11 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484         11 TGAAGGIGRAACQRFARAGDQVVVADRNVERARERAD--------SLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998665321111        11245778999999999888877642     5899


Q ss_pred             EEEcCCCCc----------------------cc----HHHHHHhCC--CC-CcEEEEeeceeeccCCCCCccCccccchh
Q 021331           76 VYDINGREA----------------------DE----VEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCESRHKGKL  126 (314)
Q Consensus        76 vi~~a~~~~----------------------~~----~~~~~~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~  126 (314)
                      +||++|...                      .+    ++.++..+.  +. .++|++||.......   +-...|..+|.
T Consensus        83 li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~---~~~~~Y~asKa  159 (520)
T PRK06484         83 LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL---PKRTAYSASKA  159 (520)
T ss_pred             EEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC---CCCchHHHHHH
Confidence            999998620                      01    122333332  22 389999986554322   22226888998


Q ss_pred             hHHHHHH-------hcCCceEEEecCeeeCCCCCCchhH-HH-HHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          127 NTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WF-FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       127 ~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      ..+.+.+       ..+++++.++|+.+-.+........ .. ......  .++       ...+...+|++++++.++.
T Consensus       160 al~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~va~~v~~l~~  230 (520)
T PRK06484        160 AVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRS--RIP-------LGRLGRPEEIAEAVFFLAS  230 (520)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHh--cCC-------CCCCcCHHHHHHHHHHHhC
Confidence            8877653       3579999999998766521100000 00 000000  011       1135578999999998887


Q ss_pred             CC--ccCCceEEecCC
Q 021331          198 NE--KASRQVFNISGE  211 (314)
Q Consensus       198 ~~--~~~~~~~~i~~~  211 (314)
                      ..  ...|.++.+.++
T Consensus       231 ~~~~~~~G~~~~~~gg  246 (520)
T PRK06484        231 DQASYITGSTLVVDGG  246 (520)
T ss_pred             ccccCccCceEEecCC
Confidence            52  224555555544

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.14  E-value=2e-10  Score=95.51  Aligned_cols=141  Identities=23%  Similarity=0.188  Sum_probs=96.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh-ccC-ceEEEEecCCChhhHHHhhhc----C-Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSS-KILHLKGDRKDYDFVKSSLSA----K-GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~D~~d~~~l~~~~~~----~-~~   73 (314)
                      ||||..||.++|.+|.++|.+++.+.|..........     ++.. ... ++.++++|++|.+++.++++.    + ++
T Consensus        18 TGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~-----~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~v   92 (282)
T KOG1205|consen   18 TGASSGIGEALAYELAKRGAKLVLVARRARRLERVAE-----ELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGRV   92 (282)
T ss_pred             eCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHH-----HHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCCC
Confidence            8999999999999999999988888877655322100     0111 112 599999999999988877632    2 79


Q ss_pred             cEEEEcCCCCc--------------------cc----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           74 DVVYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        74 d~vi~~a~~~~--------------------~~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      |++||+||...                    .+    ++.++..++  +..++|.+||...+-.   .|....|..+|..
T Consensus        93 DvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~---~P~~~~Y~ASK~A  169 (282)
T KOG1205|consen   93 DVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMP---LPFRSIYSASKHA  169 (282)
T ss_pred             CEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccC---CCcccccchHHHH
Confidence            99999999742                    11    455666666  4479999999665432   3333369999999


Q ss_pred             HHHHHH----hc---CCceE-EEecCeeeC
Q 021331          128 TESVLE----SK---GVNWT-SLRPVYIYG  149 (314)
Q Consensus       128 ~e~~~~----~~---~~~~~-ilR~~~v~g  149 (314)
                      .+.+..    +.   +..+. ++.||.|-.
T Consensus       170 l~~f~etLR~El~~~~~~i~i~V~PG~V~T  199 (282)
T KOG1205|consen  170 LEGFFETLRQELIPLGTIIIILVSPGPIET  199 (282)
T ss_pred             HHHHHHHHHHHhhccCceEEEEEecCceee
Confidence            887763    22   22121 477776644

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.14  E-value=2.3e-10  Score=99.30  Aligned_cols=171  Identities=16%  Similarity=0.152  Sum_probs=109.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCC--hhhHHHh---hhcCCc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKD--YDFVKSS---LSAKGF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d--~~~l~~~---~~~~~~   73 (314)
                      |||||+||.+++++|+++|++|++++|+.++.....     .++.+.  ...+..+.+|+.+  .+.++++   +...++
T Consensus        59 TGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~-----~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~di  133 (320)
T PLN02780         59 TGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVS-----DSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLDV  133 (320)
T ss_pred             eCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-----HHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCCc
Confidence            799999999999999999999999999876532111     111111  1356778899975  3333333   332346


Q ss_pred             cEEEEcCCCCcc----------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           74 DVVYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        74 d~vi~~a~~~~~----------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      |++||+||....                      +    ++.++..+.  +..++|++||...+... ..|....|+.+|
T Consensus       134 dilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-~~p~~~~Y~aSK  212 (320)
T PLN02780        134 GVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP-SDPLYAVYAATK  212 (320)
T ss_pred             cEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC-CCccchHHHHHH
Confidence            799999986311                      1    222333333  55689999997654211 123334699999


Q ss_pred             hhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          126 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       126 ~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      ...+.+.+       ..|++++.++||.+-.+-..          .   ...      .  ....+.+++|+.++..+..
T Consensus       213 aal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~----------~---~~~------~--~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        213 AYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS----------I---RRS------S--FLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             HHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc----------c---cCC------C--CCCCCHHHHHHHHHHHhCC
Confidence            88877653       35899999999988665210          0   000      0  1134678999999988853

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.12  E-value=5.5e-10  Score=92.20  Aligned_cols=139  Identities=7%  Similarity=0.082  Sum_probs=95.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-----C-Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----K-GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-----~-~~d   74 (314)
                      |||++.+|.++++.|.++|++|++++|+.+.......     .+.....++..+.+|+.|++++++++++     - .+|
T Consensus        11 tGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~-----~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD   85 (227)
T PRK08862         11 TSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYE-----QCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPD   85 (227)
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-----HHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCC
Confidence            7999999999999999999999999998765322111     1112234577888999999988877653     1 589


Q ss_pred             EEEEcCCCCc----------cc---------------HHHHHHhCC--C-CCcEEEEeeceeeccCCCCCccCccccchh
Q 021331           75 VVYDINGREA----------DE---------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCESRHKGKL  126 (314)
Q Consensus        75 ~vi~~a~~~~----------~~---------------~~~~~~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~  126 (314)
                      ++||++|...          ..               .+.++..+.  + ...+|++||...+      +....|..+|.
T Consensus        86 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~------~~~~~Y~asKa  159 (227)
T PRK08862         86 VLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH------QDLTGVESSNA  159 (227)
T ss_pred             EEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC------CCcchhHHHHH
Confidence            9999997311          00               111222232  2 3589999985433      11225888898


Q ss_pred             hHHHHHH-------hcCCceEEEecCeeeCC
Q 021331          127 NTESVLE-------SKGVNWTSLRPVYIYGP  150 (314)
Q Consensus       127 ~~e~~~~-------~~~~~~~ilR~~~v~g~  150 (314)
                      ..+.+.+       .+++++..|.||.+-.+
T Consensus       160 al~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        160 LVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence            8777653       35799999999987665

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.12  E-value=1.3e-09  Score=90.12  Aligned_cols=172  Identities=16%  Similarity=0.217  Sum_probs=116.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.+|+.++.+|+++|..+++.+.+.........     .+.+. ..++...||+++.+++.+..++.     .+|+
T Consensus        44 TGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~-----~~~~~-g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~I  117 (300)
T KOG1201|consen   44 TGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVK-----EIRKI-GEAKAYTCDISDREEIYRLAKKVKKEVGDVDI  117 (300)
T ss_pred             eCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHH-----HHHhc-CceeEEEecCCCHHHHHHHHHHHHHhcCCceE
Confidence            7999999999999999999999888988766432221     11111 36889999999998887766532     5899


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeece-eeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAG-VYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||....                    +    +++++..|.  +..++|.++|.. .++.....    +|..+|..+
T Consensus       118 LVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~----~YcaSK~a~  193 (300)
T KOG1201|consen  118 LVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLA----DYCASKFAA  193 (300)
T ss_pred             EEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccch----hhhhhHHHH
Confidence            9999997321                    1    445555555  667999998844 34433333    588888776


Q ss_pred             HHHHH-------h---cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          129 ESVLE-------S---KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       129 e~~~~-------~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      .-+.+       +   .+++.+.+.|+.+=..     +    +..   ..+      -......+..+.+|+.++..+..
T Consensus       194 vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tg-----m----f~~---~~~------~~~l~P~L~p~~va~~Iv~ai~~  255 (300)
T KOG1201|consen  194 VGFHESLSMELRALGKDGIKTTLVCPYFINTG-----M----FDG---ATP------FPTLAPLLEPEYVAKRIVEAILT  255 (300)
T ss_pred             HHHHHHHHHHHHhcCCCCeeEEEEeeeecccc-----c----cCC---CCC------CccccCCCCHHHHHHHHHHHHHc
Confidence            55432       1   3588888888753311     1    111   111      11235678899999999998876


Q ss_pred             Cc
Q 021331          199 EK  200 (314)
Q Consensus       199 ~~  200 (314)
                      +.
T Consensus       256 n~  257 (300)
T KOG1201|consen  256 NQ  257 (300)
T ss_pred             CC
Confidence            54

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.11  E-value=2.6e-09  Score=89.98  Aligned_cols=204  Identities=16%  Similarity=0.154  Sum_probs=127.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc---cCceEEEEecCCChhhHHHhhh----c-C-
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDRKDYDFVKSSLS----A-K-   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~d~~~l~~~~~----~-~-   71 (314)
                      |||+..||.++|+.|.+.|.+|++.+|+.+.......     .+...   ..++..+.+|+++.+..+++++    + . 
T Consensus        14 TG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~G   88 (270)
T KOG0725|consen   14 TGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQ-----ELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFG   88 (270)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCC
Confidence            7999999999999999999999999999875321111     00110   2468899999998876655543    2 2 


Q ss_pred             CccEEEEcCCCCccc----------------------HHHHHHhCC------CCCcEEEEeeceeeccCCCCCccCcccc
Q 021331           72 GFDVVYDINGREADE----------------------VEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCESRHK  123 (314)
Q Consensus        72 ~~d~vi~~a~~~~~~----------------------~~~~~~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (314)
                      ++|++||+||.....                      ...+..++.      +...++++||...+......+  ..|..
T Consensus        89 kidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~--~~Y~~  166 (270)
T KOG0725|consen   89 KIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSG--VAYGV  166 (270)
T ss_pred             CCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCc--ccchh
Confidence            599999999874311                      122222222      345788888865543322221  36899


Q ss_pred             chhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          124 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       124 ~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      +|...+++.+       .+|+++..+-||.|..+.....+.............   .......-.+...+|++.+++.++
T Consensus       167 sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~---~~~~~p~gr~g~~~eva~~~~fla  243 (270)
T KOG0725|consen  167 SKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATD---SKGAVPLGRVGTPEEVAEAAAFLA  243 (270)
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhc---cccccccCCccCHHHHHHhHHhhc
Confidence            9999888864       468999999999998874111111100111111100   000111224666899999999988


Q ss_pred             cCCc--cCCceEEecCCccc
Q 021331          197 GNEK--ASRQVFNISGEKYV  214 (314)
Q Consensus       197 ~~~~--~~~~~~~i~~~~~~  214 (314)
                      ..+.  ..|..+.+.++..+
T Consensus       244 ~~~asyitG~~i~vdgG~~~  263 (270)
T KOG0725|consen  244 SDDASYITGQTIIVDGGFTV  263 (270)
T ss_pred             CcccccccCCEEEEeCCEEe
Confidence            7743  36777777777543

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.07  E-value=3.2e-09  Score=83.89  Aligned_cols=192  Identities=14%  Similarity=0.175  Sum_probs=123.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCccccc--CCC-CCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----C
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--QLP-GESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~   72 (314)
                      |||.|.||.+++++|+.+|..+.++..+.++...  .+. ..+       ...+.|+++|+++..+++++|++.     .
T Consensus        11 tggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p-------~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~   83 (261)
T KOG4169|consen   11 TGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINP-------SVSVIFIKCDVTNRGDLEAAFDKILATFGT   83 (261)
T ss_pred             ecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCC-------CceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence            6999999999999999999888887766655321  111 000       367899999999998888888754     5


Q ss_pred             ccEEEEcCCCCc----------------ccHHHHHHhCC-----CCCcEEEEeeceeeccCCCCCccCccccchhhH---
Q 021331           73 FDVVYDINGREA----------------DEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT---  128 (314)
Q Consensus        73 ~d~vi~~a~~~~----------------~~~~~~~~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~---  128 (314)
                      +|++||.||...                .++...++.+.     ...-+|.+||..-..+   .|..+.|+.+|.-.   
T Consensus        84 iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P---~p~~pVY~AsKaGVvgF  160 (261)
T KOG4169|consen   84 IDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDP---MPVFPVYAASKAGVVGF  160 (261)
T ss_pred             eEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCc---cccchhhhhcccceeee
Confidence            899999999842                23555666665     2235889999443322   33344577777443   


Q ss_pred             ------HHHHHhcCCceEEEecCeeeCCCCCCchhHHHHHHHHc-CCCeecC---CCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          129 ------ESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA-GRPIPIP---GSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       129 ------e~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                            +.+.++.|+.+..++||.+-         ..+.+.+.. +..+..-   -+.-....--...++++.++.+++.
T Consensus       161 TRSla~~ayy~~sGV~~~avCPG~t~---------t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE~  231 (261)
T KOG4169|consen  161 TRSLADLAYYQRSGVRFNAVCPGFTR---------TDLAENIDASGGYLEYSDSIKEALERAPKQSPACCAINIVNAIEY  231 (261)
T ss_pred             ehhhhhhhhHhhcCEEEEEECCCcch---------HHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHHHHHHHhh
Confidence                  33446789999999998632         122222221 1111110   0000011233568899999999998


Q ss_pred             CccCCceEEecCCc
Q 021331          199 EKASRQVFNISGEK  212 (314)
Q Consensus       199 ~~~~~~~~~i~~~~  212 (314)
                      +. +|.+|-+.++.
T Consensus       232 ~~-NGaiw~v~~g~  244 (261)
T KOG4169|consen  232 PK-NGAIWKVDSGS  244 (261)
T ss_pred             cc-CCcEEEEecCc
Confidence            55 68888888774

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.06  E-value=5.9e-10  Score=88.04  Aligned_cols=141  Identities=17%  Similarity=0.165  Sum_probs=95.1

Q ss_pred             CCcccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|++|.+++++|.++|+ .|++++|+.........  ....+.+...++.++.+|+++++.+.+++...     .+|
T Consensus         6 ~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   83 (180)
T smart00822        6 TGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAE--LLAELEALGAEVTVVACDVADRAALAAALAAIPARLGPLR   83 (180)
T ss_pred             EcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHH--HHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCee
Confidence            69999999999999999985 68888887544211100  00111222356788999999998888776532     469


Q ss_pred             EEEEcCCCC--------------------cccHHHHHHhCC--CCCcEEEEeecee-eccCCCCCccCccccchhhHHHH
Q 021331           75 VVYDINGRE--------------------ADEVEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        75 ~vi~~a~~~--------------------~~~~~~~~~~~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      .+||+++..                    ..+...+++++.  +.+++|++||... ++....    ..|..+|...+.+
T Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~~----~~y~~sk~~~~~~  159 (180)
T smart00822       84 GVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPGQ----ANYAAANAFLDAL  159 (180)
T ss_pred             EEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCCc----hhhHHHHHHHHHH
Confidence            999999852                    122445666665  5578999998544 333221    2578888888877


Q ss_pred             HH---hcCCceEEEecCee
Q 021331          132 LE---SKGVNWTSLRPVYI  147 (314)
Q Consensus       132 ~~---~~~~~~~ilR~~~v  147 (314)
                      ++   ..+++++.+.|+.+
T Consensus       160 ~~~~~~~~~~~~~~~~g~~  178 (180)
T smart00822      160 AAHRRARGLPATSINWGAW  178 (180)
T ss_pred             HHHHHhcCCceEEEeeccc
Confidence            64   46788888888764

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.06  E-value=1.3e-09  Score=96.74  Aligned_cols=159  Identities=13%  Similarity=0.101  Sum_probs=99.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||+|+||.++++.|.++|++|++++|+.+.......        +...++..+.+|++|++++.+.+.  ++|++||+|
T Consensus       184 TGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~--------~~~~~v~~v~~Dvsd~~~v~~~l~--~IDiLInnA  253 (406)
T PRK07424        184 TGASGTLGQALLKELHQQGAKVVALTSNSDKITLEIN--------GEDLPVKTLHWQVGQEAALAELLE--KVDILIINH  253 (406)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh--------hcCCCeEEEEeeCCCHHHHHHHhC--CCCEEEECC
Confidence            7999999999999999999999999987654221111        001346788999999999999887  899999999


Q ss_pred             CCCc-----------------ccHHHHHHh----CC--CC---C-cEEEEeeceeeccCCCCCccCccccchhhHHHHHH
Q 021331           81 GREA-----------------DEVEPILDA----LP--NL---E-QFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLE  133 (314)
Q Consensus        81 ~~~~-----------------~~~~~~~~~----~~--~~---~-~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~  133 (314)
                      |...                 .++.+++++    +.  +.   + .+|.+|+... .    .+....|+.+|...+.+..
T Consensus       254 Gi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~-~----~~~~~~Y~ASKaAl~~l~~  328 (406)
T PRK07424        254 GINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEV-N----PAFSPLYELSKRALGDLVT  328 (406)
T ss_pred             CcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccc-c----CCCchHHHHHHHHHHHHHH
Confidence            8642                 112233333    32  11   1 2455554322 1    1222359999988877542


Q ss_pred             --h--cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          134 --S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       134 --~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                        .  .++.+..+.|    ||.. ..+                 .    ....+..+|+|+.++..++++.
T Consensus       329 l~~~~~~~~I~~i~~----gp~~-t~~-----------------~----~~~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        329 LRRLDAPCVVRKLIL----GPFK-SNL-----------------N----PIGVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             HHHhCCCCceEEEEe----CCCc-CCC-----------------C----cCCCCCHHHHHHHHHHHHHCCC
Confidence              1  2333333333    3311 000                 0    0124678999999999998754

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.05  E-value=1.6e-09  Score=93.45  Aligned_cols=190  Identities=13%  Similarity=0.065  Sum_probs=112.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCC--CCC---CchhhhhccCceEEEEecCCChhhHHHhhhcC----
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL--PGE---SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~----   71 (314)
                      |||++.||.++++.|++.|++|++++|+........  .+.   ....+......+.++.+|+.|++++++++++.    
T Consensus        14 TGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   93 (305)
T PRK08303         14 AGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVERIDREQ   93 (305)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            799999999999999999999999999753211000  000   00122222345778999999999888777642    


Q ss_pred             -CccEEEEcC-CCC------c-------c-----------c----HHHHHHhCC--CCCcEEEEeecee-eccCCCCCcc
Q 021331           72 -GFDVVYDIN-GRE------A-------D-----------E----VEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHC  118 (314)
Q Consensus        72 -~~d~vi~~a-~~~------~-------~-----------~----~~~~~~~~~--~~~~~i~~Ss~~v-~~~~~~~~~~  118 (314)
                       ++|++||++ |..      .       .           +    ++.++..+.  +..++|++||... +... ..+..
T Consensus        94 g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~-~~~~~  172 (305)
T PRK08303         94 GRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNAT-HYRLS  172 (305)
T ss_pred             CCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCc-CCCCc
Confidence             589999998 631      0       0           0    122333343  3468999998543 2211 11112


Q ss_pred             CccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCe-ecCCCCCc-eeeeeeHHHHH
Q 021331          119 ESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-PIPGSGIQ-VTQLGHVKDLA  189 (314)
Q Consensus       119 e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~i~~~D~a  189 (314)
                      ..|+.+|.....+.+       ..|+++..|.||.+-.+     +......  ...... .... ... ..-+...+|+|
T Consensus       173 ~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~-----~~~~~~~--~~~~~~~~~~~-~~p~~~~~~~peevA  244 (305)
T PRK08303        173 VFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSE-----MMLDAFG--VTEENWRDALA-KEPHFAISETPRYVG  244 (305)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccH-----HHHHhhc--cCccchhhhhc-cccccccCCCHHHHH
Confidence            258999988777653       35799999999887554     1110000  000000 0000 000 11234689999


Q ss_pred             HHHHHHhcCC
Q 021331          190 RAFVQVLGNE  199 (314)
Q Consensus       190 ~~~~~~l~~~  199 (314)
                      ++++.++..+
T Consensus       245 ~~v~fL~s~~  254 (305)
T PRK08303        245 RAVAALAADP  254 (305)
T ss_pred             HHHHHHHcCc
Confidence            9999998764

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.96  E-value=1.6e-09  Score=86.16  Aligned_cols=140  Identities=22%  Similarity=0.232  Sum_probs=89.2

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|.+|..+++.|.+++ .+|+++.|+........  ...+.++.....+.++.+|++|++++.+++...     .++
T Consensus         6 tGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~--~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~   83 (181)
T PF08659_consen    6 TGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAE--AAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGPID   83 (181)
T ss_dssp             ETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHH--HHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-EE
T ss_pred             ECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHH--HHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCCcc
Confidence            6999999999999999997 58999999832211000  011234444578999999999999999998753     578


Q ss_pred             EEEEcCCCCc--------------------ccHHHHHHhCC--CCCcEEEEeece-eeccCCCCCccCccccchhhHHHH
Q 021331           75 VVYDINGREA--------------------DEVEPILDALP--NLEQFIYCSSAG-VYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~~~~~~~--~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      .|||+++...                    .+..++.+++.  ....||.+||.. ++|.....    .|..+-...+.+
T Consensus        84 gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~gq~----~YaaAN~~lda~  159 (181)
T PF08659_consen   84 GVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPGQS----AYAAANAFLDAL  159 (181)
T ss_dssp             EEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TTBH----HHHHHHHHHHHH
T ss_pred             eeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcchH----hHHHHHHHHHHH
Confidence            9999998732                    23567777776  778899999955 45544322    466555555555


Q ss_pred             H---HhcCCceEEEecCe
Q 021331          132 L---ESKGVNWTSLRPVY  146 (314)
Q Consensus       132 ~---~~~~~~~~ilR~~~  146 (314)
                      .   +..+.+++.+..+.
T Consensus       160 a~~~~~~g~~~~sI~wg~  177 (181)
T PF08659_consen  160 ARQRRSRGLPAVSINWGA  177 (181)
T ss_dssp             HHHHHHTTSEEEEEEE-E
T ss_pred             HHHHHhCCCCEEEEEccc
Confidence            4   34678888877653

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.90  E-value=7.2e-09  Score=80.99  Aligned_cols=135  Identities=16%  Similarity=0.087  Sum_probs=96.1

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC------CccE
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFDV   75 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~------~~d~   75 (314)
                      +++|.||.+|+++|.++|+.|+++.|+.++-.....          ..++...+.|+++++++.+...+.      ..|.
T Consensus        15 cs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~----------~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~   84 (289)
T KOG1209|consen   15 CSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAI----------QFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL   84 (289)
T ss_pred             cCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHH----------hhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence            578999999999999999999999999877432221          267889999999999888877643      4799


Q ss_pred             EEEcCCCCc--------------------cc----HHHHHHhCC-CCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           76 VYDINGREA--------------------DE----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        76 vi~~a~~~~--------------------~~----~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      ++|.||...                    .+    ++.+...+. ....+|+++|..+|-.   .|+...|..+|...-.
T Consensus        85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vp---fpf~~iYsAsKAAiha  161 (289)
T KOG1209|consen   85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVP---FPFGSIYSASKAAIHA  161 (289)
T ss_pred             EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEec---cchhhhhhHHHHHHHH
Confidence            999998732                    12    333333332 4457899999766633   2333368889988877


Q ss_pred             HHH-------hcCCceEEEecCeeeC
Q 021331          131 VLE-------SKGVNWTSLRPVYIYG  149 (314)
Q Consensus       131 ~~~-------~~~~~~~ilR~~~v~g  149 (314)
                      +.+       -.|++++.+-+|.|-.
T Consensus       162 y~~tLrlEl~PFgv~Vin~itGGv~T  187 (289)
T KOG1209|consen  162 YARTLRLELKPFGVRVINAITGGVAT  187 (289)
T ss_pred             hhhhcEEeeeccccEEEEecccceec
Confidence            753       2466777777776544

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.86  E-value=9.7e-09  Score=79.90  Aligned_cols=138  Identities=20%  Similarity=0.226  Sum_probs=97.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhh----cC-CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----AK-GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~----~~-~~d~   75 (314)
                      |||+..||.++++.|.+.|.+|++..|+.+........         -+.+....||+.|.++.+++..    ++ ..++
T Consensus        11 TGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~---------~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNv   81 (245)
T COG3967          11 TGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE---------NPEIHTEVCDVADRDSRRELVEWLKKEYPNLNV   81 (245)
T ss_pred             eCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc---------CcchheeeecccchhhHHHHHHHHHhhCCchhe
Confidence            79999999999999999999999999998775433321         3567888899999876655543    22 5799


Q ss_pred             EEEcCCCCcc----------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      +||+||....                      +    +..++.-+.  ....+|.+||.-.+-+....|   .|..+|+.
T Consensus        82 liNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~P---vYcaTKAa  158 (245)
T COG3967          82 LINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTP---VYCATKAA  158 (245)
T ss_pred             eeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccc---cchhhHHH
Confidence            9999997311                      1    112222222  345789999976665544444   48888877


Q ss_pred             HHHH-------HHhcCCceEEEecCeeeCC
Q 021331          128 TESV-------LESKGVNWTSLRPVYIYGP  150 (314)
Q Consensus       128 ~e~~-------~~~~~~~~~ilR~~~v~g~  150 (314)
                      +-.+       ++..+++++-+-|+.|-.+
T Consensus       159 iHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         159 IHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            6444       3455788888888887664

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.86  E-value=3.3e-08  Score=82.11  Aligned_cols=185  Identities=18%  Similarity=0.162  Sum_probs=118.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+..+|..++.++..+|++|+++.|+..+..........   ......+.+..+|+.|.+++...++..     .+|.
T Consensus        39 tggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l---~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~  115 (331)
T KOG1210|consen   39 TGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELEL---LTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPIDN  115 (331)
T ss_pred             ecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhh---hhccceeeEeccccccHHHHHHHHhhhhhccCCcce
Confidence            79999999999999999999999999998775322211110   111234778889999999999888755     5899


Q ss_pred             EEEcCCCCcc--------------------cHHHH----HHhCCC---CCcEEEEee-ceeeccCCCCCccCccccchhh
Q 021331           76 VYDINGREAD--------------------EVEPI----LDALPN---LEQFIYCSS-AGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~----~~~~~~---~~~~i~~Ss-~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      +|+|||..+.                    ++.|+    +.+++.   ..+++.+|| .+.++-.+..++..+....|.+
T Consensus       116 l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~alrgL  195 (331)
T KOG1210|consen  116 LFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFALRGL  195 (331)
T ss_pred             EEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHHHHH
Confidence            9999997432                    23333    333442   338888887 3444444444444444555555


Q ss_pred             HHHHH---HhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCC--eecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          128 TESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP--IPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       128 ~e~~~---~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      ++.+-   ..+++.++..-|+.+-.|+....         ...+|  ..+...+   -+.+..+++|.+++.-+.+.+
T Consensus       196 a~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~E---------n~tkP~~t~ii~g~---ss~~~~e~~a~~~~~~~~rg~  261 (331)
T KOG1210|consen  196 AEALRQELIKYGVHVTLYYPPDTLTPGFERE---------NKTKPEETKIIEGG---SSVIKCEEMAKAIVKGMKRGN  261 (331)
T ss_pred             HHHHHHHHhhcceEEEEEcCCCCCCCccccc---------cccCchheeeecCC---CCCcCHHHHHHHHHhHHhhcC
Confidence            55443   34678888888888777753211         11111  1121222   244788999999998887643

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=98.83  E-value=1.4e-07  Score=81.02  Aligned_cols=199  Identities=8%  Similarity=-0.026  Sum_probs=113.7

Q ss_pred             CCc--ccccHHHHHHHHHHCCCeEEEEEcCCcccccCC---CCCCchhhhhc-----cCceEEEEecC--CChh------
Q 021331            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL---PGESDQEFAEF-----SSKILHLKGDR--KDYD------   62 (314)
Q Consensus         1 tGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~-----~~~~~~~~~D~--~d~~------   62 (314)
                      |||  +..||.++++.|.+.|.+|++ .|..+......   ......+....     ......+.+|+  .+++      
T Consensus        15 TGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   93 (303)
T PLN02730         15 AGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDVPEDV   93 (303)
T ss_pred             eCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccCchhh
Confidence            799  799999999999999999988 55433211100   00000000000     11245677888  3333      


Q ss_pred             ------------hHHHhhhc----C-CccEEEEcCCCCcc----------------------c----HHHHHHhCCCCCc
Q 021331           63 ------------FVKSSLSA----K-GFDVVYDINGREAD----------------------E----VEPILDALPNLEQ   99 (314)
Q Consensus        63 ------------~l~~~~~~----~-~~d~vi~~a~~~~~----------------------~----~~~~~~~~~~~~~   99 (314)
                                  +++.+++.    . .+|++||+||....                      +    ++.++..+....+
T Consensus        94 ~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~G~  173 (303)
T PLN02730         94 KTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGGA  173 (303)
T ss_pred             hcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCE
Confidence                        55555543    2 58999999964210                      0    2334444443368


Q ss_pred             EEEEeeceeeccCCCCCcc-CccccchhhHHHHHH-------h-cCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCC
Q 021331          100 FIYCSSAGVYLKSDLLPHC-ESRHKGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRP  169 (314)
Q Consensus       100 ~i~~Ss~~v~~~~~~~~~~-e~~~~~k~~~e~~~~-------~-~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~  169 (314)
                      +|++||......   .|.. ..|..+|...+.+.+       . +++++..|.||.+-.+.... +............. 
T Consensus       174 II~isS~a~~~~---~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~-  249 (303)
T PLN02730        174 SISLTYIASERI---IPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMIEYSYANA-  249 (303)
T ss_pred             EEEEechhhcCC---CCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHHHHHHHHhcC-
Confidence            999998654321   1211 258889988877653       2 47899999999886652111 00111111111111 


Q ss_pred             eecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cCCceEEecCCc
Q 021331          170 IPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       170 ~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~~~~~~i~~~~  212 (314)
                       ++       ..+...+|++.+++.++....  ..|..+.+.++.
T Consensus       250 -pl-------~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~  286 (303)
T PLN02730        250 -PL-------QKELTADEVGNAAAFLASPLASAITGATIYVDNGL  286 (303)
T ss_pred             -CC-------CCCcCHHHHHHHHHHHhCccccCccCCEEEECCCc
Confidence             11       124578999999999997532  367778887764

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=98.80  E-value=6.6e-09  Score=81.42  Aligned_cols=126  Identities=21%  Similarity=0.202  Sum_probs=85.8

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcC--CcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----C
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRG--KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~   72 (314)
                      |||+|.||.++++.|+++| +.|++++|+  .+.....     ...+.....++.++++|++++++++.+++..     .
T Consensus         6 tGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l-----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    6 TGASSGIGRALARALARRGARVVILTSRSEDSEGAQEL-----IQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             ETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHH-----HHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             ECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccc-----ccccccccccccccccccccccccccccccccccccc
Confidence            7999999999999999995 678888888  2221111     0122222478999999999998888877642     6


Q ss_pred             ccEEEEcCCCCccc--------------------HHHHHHhC--CCCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           73 FDVVYDINGREADE--------------------VEPILDAL--PNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        73 ~d~vi~~a~~~~~~--------------------~~~~~~~~--~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      +|++||++|.....                    ...+.+.+  ++..++|++||....-+   .|....|..+|...+.
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---~~~~~~Y~askaal~~  157 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRG---SPGMSAYSASKAALRG  157 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSS---STTBHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccC---CCCChhHHHHHHHHHH
Confidence            89999999974321                    11122222  35678999999665422   2333368999988888


Q ss_pred             HHHh
Q 021331          131 VLES  134 (314)
Q Consensus       131 ~~~~  134 (314)
                      +.+.
T Consensus       158 ~~~~  161 (167)
T PF00106_consen  158 LTQS  161 (167)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7653

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.76  E-value=3.6e-08  Score=84.42  Aligned_cols=148  Identities=20%  Similarity=0.088  Sum_probs=99.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-----CCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-----~~~d~   75 (314)
                      ||||..||.+++++|..+|.+|+...|+.+.......... +  +.....+.++++|+.+.+++.++.+.     ...|+
T Consensus        41 TGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~-~--~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldv  117 (314)
T KOG1208|consen   41 TGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQ-K--GKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDV  117 (314)
T ss_pred             ECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHH-h--cCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCccE
Confidence            7999999999999999999999999999754221111000 0  11136788899999999888877653     26899


Q ss_pred             EEEcCCCCcc----------------------cHHHHHHhCC--CCCcEEEEeecee-ec----cCCCCC---cc--Ccc
Q 021331           76 VYDINGREAD----------------------EVEPILDALP--NLEQFIYCSSAGV-YL----KSDLLP---HC--ESR  121 (314)
Q Consensus        76 vi~~a~~~~~----------------------~~~~~~~~~~--~~~~~i~~Ss~~v-~~----~~~~~~---~~--e~~  121 (314)
                      +|++||+...                      .+..+++.++  ...|+|++||... ..    +-....   +.  ..|
T Consensus       118 LInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~~~~Y  197 (314)
T KOG1208|consen  118 LINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKLYSSDAAY  197 (314)
T ss_pred             EEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccCccchhHH
Confidence            9999997321                      1456666666  2279999999553 10    000000   11  147


Q ss_pred             ccchhhHHHHH----Hhc--CCceEEEecCeeeCCC
Q 021331          122 HKGKLNTESVL----ESK--GVNWTSLRPVYIYGPL  151 (314)
Q Consensus       122 ~~~k~~~e~~~----~~~--~~~~~ilR~~~v~g~~  151 (314)
                      ..+|.....+.    ++.  |+.+..+.||.+..+.
T Consensus       198 ~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~  233 (314)
T KOG1208|consen  198 ALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTG  233 (314)
T ss_pred             HHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccc
Confidence            88886654433    222  7899999999988874

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.74  E-value=6.7e-08  Score=73.18  Aligned_cols=191  Identities=16%  Similarity=0.186  Sum_probs=121.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-CccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi~~   79 (314)
                      ||+.-.||+.+++.|.+.|.+|+++.|++...........        .-+..+.+|+.+-+.+.+++..+ .+|.++|.
T Consensus        13 TgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p--------~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNN   84 (245)
T KOG1207|consen   13 TGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP--------SLIIPIVGDLSAWEALFKLLVPVFPIDGLVNN   84 (245)
T ss_pred             ecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC--------cceeeeEecccHHHHHHHhhcccCchhhhhcc
Confidence            6777799999999999999999999999987654443211        33888999999999999888654 47999999


Q ss_pred             CCCCcc--------------------cH--------HHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           80 NGREAD--------------------EV--------EPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        80 a~~~~~--------------------~~--------~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      ||....                    +.        +++++-... ..+|.+||....-.-.+-   ..|..+|.....+
T Consensus        85 AgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~-GaIVNvSSqas~R~~~nH---tvYcatKaALDml  160 (245)
T KOG1207|consen   85 AGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIK-GAIVNVSSQASIRPLDNH---TVYCATKAALDML  160 (245)
T ss_pred             chhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCC-ceEEEecchhcccccCCc---eEEeecHHHHHHH
Confidence            987321                    11        122222222 348999996653221111   1588888776655


Q ss_pred             HH----h---cCCceEEEecCeeeCCCCC-CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCcc--
Q 021331          132 LE----S---KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA--  201 (314)
Q Consensus       132 ~~----~---~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~--  201 (314)
                      .+    +   +++++..+.|..|...-.. .+.-+.-...++..         -..-.|..++.++.+++.+++....  
T Consensus       161 Tk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~r---------iPl~rFaEV~eVVnA~lfLLSd~ssmt  231 (245)
T KOG1207|consen  161 TKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDR---------IPLKRFAEVDEVVNAVLFLLSDNSSMT  231 (245)
T ss_pred             HHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhh---------CchhhhhHHHHHHhhheeeeecCcCcc
Confidence            43    2   4578888889888664221 11111111111111         1123477789999999999986442  


Q ss_pred             CCceEEecCCc
Q 021331          202 SRQVFNISGEK  212 (314)
Q Consensus       202 ~~~~~~i~~~~  212 (314)
                      .|...-+.||.
T Consensus       232 tGstlpveGGf  242 (245)
T KOG1207|consen  232 TGSTLPVEGGF  242 (245)
T ss_pred             cCceeeecCCc
Confidence            56677777664

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=98.72  E-value=6.5e-08  Score=80.47  Aligned_cols=142  Identities=20%  Similarity=0.160  Sum_probs=97.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhcc-CceEEEEecCCChh----hHHHhhhcCCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYD----FVKSSLSAKGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~----~l~~~~~~~~~d~   75 (314)
                      ||||..||++.+++|+++|++|+.++|+.++.....     +++++.+ -.++++.+|+++++    .+.+.+....+-+
T Consensus        55 TGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~-----kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI  129 (312)
T KOG1014|consen   55 TGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVA-----KEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI  129 (312)
T ss_pred             ECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence            799999999999999999999999999998864322     3444443 46888899998665    4666677667888


Q ss_pred             EEEcCCCCccc--------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           76 VYDINGREADE--------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~~~~--------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      +||++|.....                          ++-++.-|-  +..-+|++||....   ...|..-.|..+|..
T Consensus       130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~---~p~p~~s~ysasK~~  206 (312)
T KOG1014|consen  130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL---IPTPLLSVYSASKAF  206 (312)
T ss_pred             EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc---ccChhHHHHHHHHHH
Confidence            99999974311                          222232332  33467888884432   122333367888875


Q ss_pred             HHHHH-------HhcCCceEEEecCeeeCC
Q 021331          128 TESVL-------ESKGVNWTSLRPVYIYGP  150 (314)
Q Consensus       128 ~e~~~-------~~~~~~~~ilR~~~v~g~  150 (314)
                      .+.+-       +.+|+.+-.+-|..|-++
T Consensus       207 v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTk  236 (312)
T KOG1014|consen  207 VDFFSRCLQKEYESKGIFVQSVIPYLVATK  236 (312)
T ss_pred             HHHHHHHHHHHHHhcCeEEEEeehhheecc
Confidence            54432       456888888888877665

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=98.67  E-value=3.3e-07  Score=76.42  Aligned_cols=136  Identities=21%  Similarity=0.180  Sum_probs=97.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhh-------cCCc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS-------AKGF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~-------~~~~   73 (314)
                      ||.....|..+|++|.++|+.|.+-...++... .+...-      ..++...++.|++++++++++.+       +.+.
T Consensus        35 TGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae-~L~~~~------~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gL  107 (322)
T KOG1610|consen   35 TGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAE-SLRGET------KSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGL  107 (322)
T ss_pred             ecCCcHHHHHHHHHHHhcCCEEEEEeecCchHH-HHhhhh------cCCcceeEeeccCCHHHHHHHHHHHHHhcccccc
Confidence            788889999999999999999999875554422 221111      03788889999999998887765       2368


Q ss_pred             cEEEEcCCCC---------------------ccc----HHHHHHhCC-CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           74 DVVYDINGRE---------------------ADE----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        74 d~vi~~a~~~---------------------~~~----~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      -.|||+||..                     .-+    +++++-..+ .-.|+|++||...  . -..|.--+|..+|..
T Consensus       108 wglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G--R-~~~p~~g~Y~~SK~a  184 (322)
T KOG1610|consen  108 WGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG--R-VALPALGPYCVSKFA  184 (322)
T ss_pred             eeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc--C-ccCcccccchhhHHH
Confidence            8999999952                     122    344444455 4469999999553  2 223334479999998


Q ss_pred             HHHHH-------HhcCCceEEEecCe
Q 021331          128 TESVL-------ESKGVNWTSLRPVY  146 (314)
Q Consensus       128 ~e~~~-------~~~~~~~~ilR~~~  146 (314)
                      .|.+.       ..+|+++.++-||.
T Consensus       185 Veaf~D~lR~EL~~fGV~VsiiePG~  210 (322)
T KOG1610|consen  185 VEAFSDSLRRELRPFGVKVSIIEPGF  210 (322)
T ss_pred             HHHHHHHHHHHHHhcCcEEEEeccCc
Confidence            88764       45799999999994

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=98.67  E-value=5.2e-07  Score=71.54  Aligned_cols=178  Identities=16%  Similarity=0.162  Sum_probs=112.0

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEE-EcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-------C
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-------~   71 (314)
                      |||+..||.-|+++|++. |.++++. .|+++.....+.     .....++++++++.|+++.+++.++.++       .
T Consensus         9 tGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~-----~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~   83 (249)
T KOG1611|consen    9 TGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELA-----LKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD   83 (249)
T ss_pred             eccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHH-----HhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence            799999999999999977 5555554 455655322221     1111258999999999988888877654       3


Q ss_pred             CccEEEEcCCCCc---------------------cc----HHH---HHHhCC----------CCCcEEEEeeceee-ccC
Q 021331           72 GFDVVYDINGREA---------------------DE----VEP---ILDALP----------NLEQFIYCSSAGVY-LKS  112 (314)
Q Consensus        72 ~~d~vi~~a~~~~---------------------~~----~~~---~~~~~~----------~~~~~i~~Ss~~v~-~~~  112 (314)
                      +.+.+|++||...                     .+    ++.   ++..+.          .-..+|++||...- +..
T Consensus        84 GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~~  163 (249)
T KOG1611|consen   84 GLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGGF  163 (249)
T ss_pred             CceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCCC
Confidence            6899999999721                     11    222   222222          11358888885432 221


Q ss_pred             CCCCccCccccchhhHHHHHHh-------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeH
Q 021331          113 DLLPHCESRHKGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  185 (314)
Q Consensus       113 ~~~~~~e~~~~~k~~~e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  185 (314)
                      ...+.. .|..+|.....+.+.       .++-++.+.||+|-..-                      |.   ....+.+
T Consensus       164 ~~~~~~-AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDM----------------------gg---~~a~ltv  217 (249)
T KOG1611|consen  164 RPGGLS-AYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDM----------------------GG---KKAALTV  217 (249)
T ss_pred             CCcchh-hhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCC----------------------CC---CCcccch
Confidence            211221 688999888777653       45667888999875431                      11   1245667


Q ss_pred             HHHHHHHHHHhcC--CccCCceEEec
Q 021331          186 KDLARAFVQVLGN--EKASRQVFNIS  209 (314)
Q Consensus       186 ~D~a~~~~~~l~~--~~~~~~~~~i~  209 (314)
                      ++-+..++..+.+  +..+|..|+-.
T Consensus       218 eeSts~l~~~i~kL~~~hnG~ffn~d  243 (249)
T KOG1611|consen  218 EESTSKLLASINKLKNEHNGGFFNRD  243 (249)
T ss_pred             hhhHHHHHHHHHhcCcccCcceEccC
Confidence            8888888888775  44466666653

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.55  E-value=5.2e-07  Score=68.27  Aligned_cols=189  Identities=18%  Similarity=0.258  Sum_probs=119.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||...+|.+.++.|.++|..|..++...++-....        .+...++.|...|++.++++..++...     +.|+
T Consensus        15 tggasglg~ataerlakqgasv~lldlp~skg~~va--------kelg~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen   15 TGGASGLGKATAERLAKQGASVALLDLPQSKGADVA--------KELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             ecCcccccHHHHHHHHhcCceEEEEeCCcccchHHH--------HHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            789999999999999999999999998876633211        122478999999999998888887643     5899


Q ss_pred             EEEcCCCC--------------------------cccHHHHHHh----CC------CCCc--EEEEeeceeeccCCCCCc
Q 021331           76 VYDINGRE--------------------------ADEVEPILDA----LP------NLEQ--FIYCSSAGVYLKSDLLPH  117 (314)
Q Consensus        76 vi~~a~~~--------------------------~~~~~~~~~~----~~------~~~~--~i~~Ss~~v~~~~~~~~~  117 (314)
                      .+||||..                          ..++-|+++.    |.      +.+|  +|...|...|....+.. 
T Consensus        87 ~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqa-  165 (260)
T KOG1199|consen   87 LVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQA-  165 (260)
T ss_pred             eeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchh-
Confidence            99999972                          1223333332    11      2233  33333444454332221 


Q ss_pred             cCccccchhhHHHH----HH---hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcC--CCeecCCCCCceeeeeeHHHH
Q 021331          118 CESRHKGKLNTESV----LE---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG--RPIPIPGSGIQVTQLGHVKDL  188 (314)
Q Consensus       118 ~e~~~~~k~~~e~~----~~---~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~D~  188 (314)
                        .|..+|..+--+    .+   -.|++++.+-|+.+-.|     ++..+-++...-  ..+++|.      .+-|..+-
T Consensus       166 --aysaskgaivgmtlpiardla~~gir~~tiapglf~tp-----llsslpekv~~fla~~ipfps------rlg~p~ey  232 (260)
T KOG1199|consen  166 --AYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTP-----LLSSLPEKVKSFLAQLIPFPS------RLGHPHEY  232 (260)
T ss_pred             --hhhcccCceEeeechhhhhcccCceEEEeecccccCCh-----hhhhhhHHHHHHHHHhCCCch------hcCChHHH
Confidence              466666543222    22   34688888888764444     444443333221  2233321      24467788


Q ss_pred             HHHHHHHhcCCccCCceEEecCC
Q 021331          189 ARAFVQVLGNEKASRQVFNISGE  211 (314)
Q Consensus       189 a~~~~~~l~~~~~~~~~~~i~~~  211 (314)
                      +..+..+++++..+|+++.+.+.
T Consensus       233 ahlvqaiienp~lngevir~dga  255 (260)
T KOG1199|consen  233 AHLVQAIIENPYLNGEVIRFDGA  255 (260)
T ss_pred             HHHHHHHHhCcccCCeEEEecce
Confidence            88889999998888999888764

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.51  E-value=3.9e-06  Score=72.04  Aligned_cols=197  Identities=9%  Similarity=0.019  Sum_probs=106.0

Q ss_pred             CCcc--cccHHHHHHHHHHCCCeEEEEEcCC-------cccccCCCCCCchhhhhccC-----ceEEEEecCCChh----
Q 021331            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGK-------APIAQQLPGESDQEFAEFSS-----KILHLKGDRKDYD----   62 (314)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~D~~d~~----   62 (314)
                      |||+  ..||.++++.|.++|++|++.++.+       ..........   .......     .+..+..|+.+++    
T Consensus        14 TGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~d~~~~~~v~~   90 (299)
T PRK06300         14 AGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDAS---RKLSNGSLLTFAKIYPMDASFDTPEDVPE   90 (299)
T ss_pred             eCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhccccccccc---ccccccchhhhhhHHHhhhhcCCCEEeec
Confidence            6884  8999999999999999999876541       0000000000   0000000     0111122332222    


Q ss_pred             --------------hHHHhhh----cC-CccEEEEcCCCCcc----------------------c----HHHHHHhCCCC
Q 021331           63 --------------FVKSSLS----AK-GFDVVYDINGREAD----------------------E----VEPILDALPNL   97 (314)
Q Consensus        63 --------------~l~~~~~----~~-~~d~vi~~a~~~~~----------------------~----~~~~~~~~~~~   97 (314)
                                    +++.+++    .. ++|++||+||....                      +    ++.++..+...
T Consensus        91 ~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~  170 (299)
T PRK06300         91 EIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPG  170 (299)
T ss_pred             ccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC
Confidence                          2444333    22 59999999975210                      0    22344444433


Q ss_pred             CcEEEEeeceeeccCCCCCcc-CccccchhhHHHHHH-------h-cCCceEEEecCeeeCCCCCC-chhHHHHHHHHcC
Q 021331           98 EQFIYCSSAGVYLKSDLLPHC-ESRHKGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAG  167 (314)
Q Consensus        98 ~~~i~~Ss~~v~~~~~~~~~~-e~~~~~k~~~e~~~~-------~-~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~  167 (314)
                      .++|.+||....-.   .|.. ..|..+|...+.+.+       . +|+++..|.||.+-.+.... .............
T Consensus       171 G~ii~iss~~~~~~---~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~  247 (299)
T PRK06300        171 GSTISLTYLASMRA---VPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERMVDYYQDW  247 (299)
T ss_pred             CeEEEEeehhhcCc---CCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHHHHHHHHhc
Confidence            57888887544321   1221 148888988766652       2 48999999999876652111 0001111111111


Q ss_pred             CCeecCCCCCceeeeeeHHHHHHHHHHHhcCC--ccCCceEEecCCc
Q 021331          168 RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEK  212 (314)
Q Consensus       168 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~--~~~~~~~~i~~~~  212 (314)
                        .++       ..+...+|++++++.++...  ...|.++.+.++.
T Consensus       248 --~p~-------~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~  285 (299)
T PRK06300        248 --APL-------PEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGA  285 (299)
T ss_pred             --CCC-------CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence              111       12456899999999998753  2367788887764

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.50  E-value=3.3e-07  Score=97.26  Aligned_cols=146  Identities=15%  Similarity=0.033  Sum_probs=98.6

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEEEcCCccc--c---c-------------------------CCCC-------C--C
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPI--A---Q-------------------------QLPG-------E--S   40 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~--~---~-------------------------~~~~-------~--~   40 (314)
                      |||+|.||..+++.|.++ |.+|++++|+....  .   .                         .+..       .  .
T Consensus      2003 TGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~~~~~ei 2082 (2582)
T TIGR02813      2003 TGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPVLSSLEI 2082 (2582)
T ss_pred             eCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccccchhHHH
Confidence            799999999999999998 69999999983100  0   0                         0000       0  0


Q ss_pred             ---chhhhhccCceEEEEecCCChhhHHHhhhcC----CccEEEEcCCCC--------------------cccHHHHHHh
Q 021331           41 ---DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVVYDINGRE--------------------ADEVEPILDA   93 (314)
Q Consensus        41 ---~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~----~~d~vi~~a~~~--------------------~~~~~~~~~~   93 (314)
                         ...+...+..+.++.+|++|.+++.+++...    ++|.|||+||..                    +.++.+++++
T Consensus      2083 ~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~a 2162 (2582)
T TIGR02813      2083 AQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAA 2162 (2582)
T ss_pred             HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence               0112233457889999999999888887643    589999999973                    2335567766


Q ss_pred             CC--CCCcEEEEeecee-eccCCCCCccCccccchhhHHHHHH----h-cCCceEEEecCeeeCC
Q 021331           94 LP--NLEQFIYCSSAGV-YLKSDLLPHCESRHKGKLNTESVLE----S-KGVNWTSLRPVYIYGP  150 (314)
Q Consensus        94 ~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~k~~~e~~~~----~-~~~~~~ilR~~~v~g~  150 (314)
                      +.  ..++||++||... +|..+..    .|..+|.....+.+    + .+++++.+.+|.+-++
T Consensus      2163 l~~~~~~~IV~~SSvag~~G~~gqs----~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813      2163 LNAENIKLLALFSSAAGFYGNTGQS----DYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred             HHHhCCCeEEEEechhhcCCCCCcH----HHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence            65  4568999999544 4433222    58888876665542    2 2578888999877654

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A

Probab=98.45  E-value=4.1e-07  Score=57.90  Aligned_cols=58  Identities=28%  Similarity=0.425  Sum_probs=36.0

Q ss_pred             HHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHhhhhcC
Q 021331          222 ACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGR  290 (314)
Q Consensus       222 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~~~~~  290 (314)
                      ++++++|++. .+...+          .++.+...++.|++|++++|||.|+++++++++++.+|+.++
T Consensus         1 A~e~vtG~~i-~~~~~~----------rR~GD~~~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~n   58 (62)
T PF13950_consen    1 AFEKVTGKKI-PVEYAP----------RRPGDPAHLVADISKAREELGWKPKYSLEDMIRDAWNWQKKN   58 (62)
T ss_dssp             HHHHHHTS----EEEE-------------TT--SEE-B--HHHHHHC----SSSHHHHHHHHHHHHHHS
T ss_pred             CcHHHHCCCC-CceECC----------CCCCchhhhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHC
Confidence            3677888776 444333          256777889999999999999999999999999999998774

...

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=98.42  E-value=1.8e-06  Score=72.41  Aligned_cols=142  Identities=18%  Similarity=0.200  Sum_probs=90.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCccc-ccCCCCCCchhhhhcc-CceEEEEecCCC-hhhHHHhhhc----C-C
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFS-SKILHLKGDRKD-YDFVKSSLSA----K-G   72 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~D~~d-~~~l~~~~~~----~-~   72 (314)
                      |||++.+|.++++.|.+.|+.|+++.|+.... ......    ...... ..+.+..+|+++ .+++..+++.    . +
T Consensus        11 TGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~   86 (251)
T COG1028          11 TGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAA----AIKEAGGGRAAAVAADVSDDEESVEALVAAAEEEFGR   86 (251)
T ss_pred             eCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHH----HHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            79999999999999999999999888876541 000000    000001 357788899998 7776665542    1 4


Q ss_pred             ccEEEEcCCCCcc--c-------------------HHHHHHhCC-CCC--cEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           73 FDVVYDINGREAD--E-------------------VEPILDALP-NLE--QFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        73 ~d~vi~~a~~~~~--~-------------------~~~~~~~~~-~~~--~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +|++||+||....  .                   ...+.+++. ..+  ++|++||.... .....  ...|..+|...
T Consensus        87 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~--~~~Y~~sK~al  163 (251)
T COG1028          87 IDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG--QAAYAASKAAL  163 (251)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC--cchHHHHHHHH
Confidence            8999999997421  0                   111122111 122  89999997654 22211  23588888777


Q ss_pred             HHHH-------HhcCCceEEEecCeeeC
Q 021331          129 ESVL-------ESKGVNWTSLRPVYIYG  149 (314)
Q Consensus       129 e~~~-------~~~~~~~~ilR~~~v~g  149 (314)
                      +.+.       ..+|+.+..+.||.+-.
T Consensus       164 ~~~~~~l~~e~~~~gi~v~~v~PG~~~t  191 (251)
T COG1028         164 IGLTKALALELAPRGIRVNAVAPGYIDT  191 (251)
T ss_pred             HHHHHHHHHHHhhhCcEEEEEEeccCCC
Confidence            6654       23678999999995443

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.41  E-value=3.1e-07  Score=72.33  Aligned_cols=150  Identities=13%  Similarity=0.207  Sum_probs=94.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||||++|. +++.|.++|++|++++|+++.......     .+.. ..++.++.+|+.|++++.++++..     .+|.
T Consensus         6 tGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~-----~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~   78 (177)
T PRK08309          6 IGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKR-----ESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFDL   78 (177)
T ss_pred             ECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHH-----Hhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeE
Confidence            699998765 999999999999999987654221110     0100 246788899999999888877632     4678


Q ss_pred             EEEcCCCCcccHHHHHHhCC--CCC----cEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCceEEEecCeeeC
Q 021331           76 VYDINGREADEVEPILDALP--NLE----QFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYG  149 (314)
Q Consensus        76 vi~~a~~~~~~~~~~~~~~~--~~~----~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~~~ilR~~~v~g  149 (314)
                      +|+..-  ....+++..+|+  +++    +|+++=...+     ..|        +...+... .....|.-+.+|.+.-
T Consensus        79 lv~~vh--~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~-----~~~--------~~~~~~~~-~~~~~~~~i~lgf~~~  142 (177)
T PRK08309         79 AVAWIH--SSAKDALSVVCRELDGSSETYRLFHVLGSAA-----SDP--------RIPSEKIG-PARCSYRRVILGFVLE  142 (177)
T ss_pred             EEEecc--ccchhhHHHHHHHHccCCCCceEEEEeCCcC-----Cch--------hhhhhhhh-hcCCceEEEEEeEEEe
Confidence            886654  346778888887  666    7887543222     111        12222222 2345666677765543


Q ss_pred             CCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          150 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      ..                           .--|++-+.+++.++.+++.+.
T Consensus       143 ~~---------------------------~~rwlt~~ei~~gv~~~~~~~~  166 (177)
T PRK08309        143 DT---------------------------YSRWLTHEEISDGVIKAIESDA  166 (177)
T ss_pred             CC---------------------------ccccCchHHHHHHHHHHHhcCC
Confidence            21                           1236666777788777776543

>PRK06720 hypothetical protein; Provisional

Probab=98.31  E-value=1e-06  Score=68.93  Aligned_cols=77  Identities=19%  Similarity=0.225  Sum_probs=56.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc----C-CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K-GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~----~-~~d~   75 (314)
                      |||+|.+|..+++.|.+.|++|++++|+.+......     ..+......+.++.+|+++.+++.+++++    . ++|+
T Consensus        22 TGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDi   96 (169)
T PRK06720         22 TGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATV-----EEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDM   96 (169)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998765321100     11111124567889999999887775532    2 6999


Q ss_pred             EEEcCCC
Q 021331           76 VYDINGR   82 (314)
Q Consensus        76 vi~~a~~   82 (314)
                      +||+||.
T Consensus        97 lVnnAG~  103 (169)
T PRK06720         97 LFQNAGL  103 (169)
T ss_pred             EEECCCc
Confidence            9999985

>PRK09620 hypothetical protein; Provisional

Probab=98.29  E-value=1.7e-06  Score=70.95  Aligned_cols=72  Identities=17%  Similarity=0.164  Sum_probs=49.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      +|||+|.+|++.|+.+|++|+++++...........         ...+..+.++....+.+.+++...++|+|||+|+.
T Consensus        27 SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~---------~~~~~~V~s~~d~~~~l~~~~~~~~~D~VIH~AAv   97 (229)
T PRK09620         27 AKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINN---------QLELHPFEGIIDLQDKMKSIITHEKVDAVIMAAAG   97 (229)
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCC---------ceeEEEEecHHHHHHHHHHHhcccCCCEEEECccc
Confidence            579999999999999999999998653321111110         12334455544334677788865579999999987


Q ss_pred             C
Q 021331           83 E   83 (314)
Q Consensus        83 ~   83 (314)
                      .
T Consensus        98 s   98 (229)
T PRK09620         98 S   98 (229)
T ss_pred             c
Confidence            3

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.15  E-value=1.3e-06  Score=73.74  Aligned_cols=98  Identities=18%  Similarity=0.241  Sum_probs=72.1

Q ss_pred             CCcccccHHHHHHHHHH----CCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVK----EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~v   76 (314)
                      .|||||.|..+++++.+    .+...-+..|++.+....+..-..+.-.+....+ ++.+|..|++++.+..+  ++.+|
T Consensus        11 yGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak--~~~vi   87 (423)
T KOG2733|consen   11 YGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAK--QARVI   87 (423)
T ss_pred             EccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHh--hhEEE
Confidence            49999999999999999    5778888889987754333211111111112334 88999999999999999  99999


Q ss_pred             EEcCCCCcccHHHHHHhCC-CCCcEE
Q 021331           77 YDINGREADEVEPILDALP-NLEQFI  101 (314)
Q Consensus        77 i~~a~~~~~~~~~~~~~~~-~~~~~i  101 (314)
                      +||+|+-..+-.+++.+|- +..+-|
T Consensus        88 vN~vGPyR~hGE~VVkacienG~~~v  113 (423)
T KOG2733|consen   88 VNCVGPYRFHGEPVVKACIENGTHHV  113 (423)
T ss_pred             EeccccceecCcHHHHHHHHcCCcee
Confidence            9999998777777777776 333433

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.14  E-value=6.9e-06  Score=67.57  Aligned_cols=68  Identities=19%  Similarity=0.272  Sum_probs=48.4

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCC--hhhHHHhhhcCCccEEEEc
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~l~~~~~~~~~d~vi~~   79 (314)
                      .+||++|.+|++.|+++|++|++++|......  ..          ..++.++.++..+  .+.+.+.+.  ++|+|||+
T Consensus        23 ~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--~~----------~~~v~~i~v~s~~~m~~~l~~~~~--~~DivIh~   88 (229)
T PRK06732         23 HSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--EP----------HPNLSIIEIENVDDLLETLEPLVK--DHDVLIHS   88 (229)
T ss_pred             ccchHHHHHHHHHHHhCCCEEEEEECcccccC--CC----------CCCeEEEEEecHHHHHHHHHHHhc--CCCEEEeC
Confidence            47999999999999999999999987643211  00          1356666654322  245556666  79999999


Q ss_pred             CCCC
Q 021331           80 NGRE   83 (314)
Q Consensus        80 a~~~   83 (314)
                      |+..
T Consensus        89 AAvs   92 (229)
T PRK06732         89 MAVS   92 (229)
T ss_pred             CccC
Confidence            9974

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.06  E-value=8.5e-06  Score=71.27  Aligned_cols=81  Identities=26%  Similarity=0.297  Sum_probs=66.1

Q ss_pred             cccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |+|++|+.++..|++++ ++|++.+|+.+++.+....        ..++++..++|+.|.+++.++++  +.|+|||++.
T Consensus         8 GaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~--------~~~~v~~~~vD~~d~~al~~li~--~~d~VIn~~p   77 (389)
T COG1748           8 GAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAEL--------IGGKVEALQVDAADVDALVALIK--DFDLVINAAP   77 (389)
T ss_pred             CCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhh--------ccccceeEEecccChHHHHHHHh--cCCEEEEeCC
Confidence            45999999999999998 9999999998875433221        12579999999999999999999  7899999998


Q ss_pred             CCcccHHHHHHhCC
Q 021331           82 READEVEPILDALP   95 (314)
Q Consensus        82 ~~~~~~~~~~~~~~   95 (314)
                      .....  +++++|.
T Consensus        78 ~~~~~--~i~ka~i   89 (389)
T COG1748          78 PFVDL--TILKACI   89 (389)
T ss_pred             chhhH--HHHHHHH
Confidence            75543  6777766

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=97.98  E-value=0.00034  Score=56.04  Aligned_cols=191  Identities=12%  Similarity=0.138  Sum_probs=108.6

Q ss_pred             cccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccEEEEc
Q 021331            5 RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDVVYDI   79 (314)
Q Consensus         5 G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~vi~~   79 (314)
                      -.|+..+++.|.++|.++..+...+.- .+.+.     ++.+......++.||+++.+++...|...     .+|.+||+
T Consensus        18 rSIAwGIAk~l~~~GAeL~fTy~~e~l-~krv~-----~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHs   91 (259)
T COG0623          18 RSIAWGIAKALAEQGAELAFTYQGERL-EKRVE-----ELAEELGSDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHS   91 (259)
T ss_pred             ccHHHHHHHHHHHcCCEEEEEeccHHH-HHHHH-----HHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEE
Confidence            468899999999999998887766522 11111     11111233567899999998888887643     68999999


Q ss_pred             CCCCccc------------------------HHHHHHh----CCCCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           80 NGREADE------------------------VEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        80 a~~~~~~------------------------~~~~~~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      .+.....                        ...+..+    |.....+|-+|   -+|.....|.....+.+|...|.-
T Consensus        92 IaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLt---Ylgs~r~vPnYNvMGvAKAaLEas  168 (259)
T COG0623          92 IAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLT---YLGSERVVPNYNVMGVAKAALEAS  168 (259)
T ss_pred             eccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEE---eccceeecCCCchhHHHHHHHHHH
Confidence            8863211                        1122222    33334455322   112222233322356667776665


Q ss_pred             HH----h---cCCceEEEecCeeeCC--CCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC--c
Q 021331          132 LE----S---KGVNWTSLRPVYIYGP--LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--K  200 (314)
Q Consensus       132 ~~----~---~~~~~~ilR~~~v~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~--~  200 (314)
                      ++    +   .|+++..+..|.+=.-  ..-. .+..++.......|+         +.-+.++||+...+.++++-  .
T Consensus       169 vRyLA~dlG~~gIRVNaISAGPIrTLAasgI~-~f~~~l~~~e~~aPl---------~r~vt~eeVG~tA~fLlSdLssg  238 (259)
T COG0623         169 VRYLAADLGKEGIRVNAISAGPIRTLAASGIG-DFRKMLKENEANAPL---------RRNVTIEEVGNTAAFLLSDLSSG  238 (259)
T ss_pred             HHHHHHHhCccCeEEeeecccchHHHHhhccc-cHHHHHHHHHhhCCc---------cCCCCHHHhhhhHHHHhcchhcc
Confidence            43    2   3566655554433110  0001 133344443333332         33566899999999988862  2


Q ss_pred             cCCceEEecCCccc
Q 021331          201 ASRQVFNISGEKYV  214 (314)
Q Consensus       201 ~~~~~~~i~~~~~~  214 (314)
                      ..|++.++.+|..+
T Consensus       239 iTGei~yVD~G~~i  252 (259)
T COG0623         239 ITGEIIYVDSGYHI  252 (259)
T ss_pred             cccceEEEcCCcee
Confidence            36899999888643

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.91  E-value=1.1e-05  Score=72.16  Aligned_cols=90  Identities=22%  Similarity=0.296  Sum_probs=64.6

Q ss_pred             CCcccccHHHHHHHHHHCC-C-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG-H-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      .|| |++|+.+++.|.+++ + +|++.+|+..+........       ...++.++++|+.|.+++.++++  +.|+|||
T Consensus         4 lG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~l~~~~~--~~dvVin   73 (386)
T PF03435_consen    4 LGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-------LGDRVEAVQVDVNDPESLAELLR--GCDVVIN   73 (386)
T ss_dssp             E---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---------TTTTEEEEE--TTTHHHHHHHHT--TSSEEEE
T ss_pred             EcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-------cccceeEEEEecCCHHHHHHHHh--cCCEEEE
Confidence            488 999999999999986 4 8999999987743222100       13689999999999999999999  9999999


Q ss_pred             cCCCCcccHHHHHHhCC-CCCcEEE
Q 021331           79 INGREADEVEPILDALP-NLEQFIY  102 (314)
Q Consensus        79 ~a~~~~~~~~~~~~~~~-~~~~~i~  102 (314)
                      +++..  ....++++|. ...++|=
T Consensus        74 ~~gp~--~~~~v~~~~i~~g~~yvD   96 (386)
T PF03435_consen   74 CAGPF--FGEPVARACIEAGVHYVD   96 (386)
T ss_dssp             -SSGG--GHHHHHHHHHHHT-EEEE
T ss_pred             CCccc--hhHHHHHHHHHhCCCeec
Confidence            99876  4556777776 3335553

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.90  E-value=4.1e-05  Score=63.79  Aligned_cols=83  Identities=16%  Similarity=0.140  Sum_probs=65.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      +||||. |..|++.|.+.|++|++..++..... .+..          .+...+..+..|.+++.+.+.+.++|+||+++
T Consensus         6 lGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~-~~~~----------~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAt   73 (256)
T TIGR00715         6 MGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKH-LYPI----------HQALTVHTGALDPQELREFLKRHSIDILVDAT   73 (256)
T ss_pred             EechHH-HHHHHHHHHhCCCeEEEEEccCCccc-cccc----------cCCceEEECCCCHHHHHHHHHhcCCCEEEEcC
Confidence            599999 99999999999999999998876532 2221          22334556777888899999988999999998


Q ss_pred             CCCc-ccHHHHHHhCC
Q 021331           81 GREA-DEVEPILDALP   95 (314)
Q Consensus        81 ~~~~-~~~~~~~~~~~   95 (314)
                      .+.. ..++++.++|.
T Consensus        74 HPfA~~is~~a~~a~~   89 (256)
T TIGR00715        74 HPFAAQITTNATAVCK   89 (256)
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            7754 55778888888

This enzyme was found to be a monomer by gel filtration.

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.83  E-value=4.5e-05  Score=65.74  Aligned_cols=141  Identities=20%  Similarity=0.164  Sum_probs=85.7

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      +|++|.+|+.++..|..++  .+++.+++....  ....     ++.+  ........+.+|+.+..+.++  ++|+||+
T Consensus        14 iGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~--g~a~-----Dl~~--~~~~~~v~~~td~~~~~~~l~--gaDvVVi   82 (321)
T PTZ00325         14 LGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAP--GVAA-----DLSH--IDTPAKVTGYADGELWEKALR--GADLVLI   82 (321)
T ss_pred             ECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCc--cccc-----chhh--cCcCceEEEecCCCchHHHhC--CCCEEEE
Confidence            5888999999999998665  689999983211  1111     1111  111334456667666567788  9999999


Q ss_pred             cCCCCc--------------ccHHHHHHhCC--CCCcEEEEeeceeec----------cCCCCCccCccccchhh----H
Q 021331           79 INGREA--------------DEVEPILDALP--NLEQFIYCSSAGVYL----------KSDLLPHCESRHKGKLN----T  128 (314)
Q Consensus        79 ~a~~~~--------------~~~~~~~~~~~--~~~~~i~~Ss~~v~~----------~~~~~~~~e~~~~~k~~----~  128 (314)
                      ++|...              ..++++++++.  +.+++|+++|..+..          .....|....|+.+-..    .
T Consensus        83 taG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r  162 (321)
T PTZ00325         83 CAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRAR  162 (321)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHHH
Confidence            999732              23566777776  888999999976532          11111222223332111    1


Q ss_pred             HHHHHhcCCceEEEecCeeeCCCCC
Q 021331          129 ESVLESKGVNWTSLRPVYIYGPLNY  153 (314)
Q Consensus       129 e~~~~~~~~~~~ilR~~~v~g~~~~  153 (314)
                      -.+.+..+++..-++ +.|+|.+..
T Consensus       163 ~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        163 KFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             HHHHHHhCcChhheE-EEEEeecCC
Confidence            112245667777777 788887654

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.59  E-value=0.00012  Score=63.48  Aligned_cols=75  Identities=16%  Similarity=0.081  Sum_probs=47.5

Q ss_pred             CCcccccHHHHHHHHHHCC-------CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCc
Q 021331            1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~   73 (314)
                      |||+|++|++++..|+..+       .+|+++++++...  .+.. ....+.   ........|+....++.+.++  ++
T Consensus         8 ~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~--~~~g-~~~Dl~---d~~~~~~~~~~~~~~~~~~l~--~a   79 (325)
T cd01336           8 TGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALK--ALEG-VVMELQ---DCAFPLLKSVVATTDPEEAFK--DV   79 (325)
T ss_pred             ECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccc--cccc-eeeehh---hccccccCCceecCCHHHHhC--CC
Confidence            6999999999999998854       5899999965421  0110 000010   000011234444556777788  99


Q ss_pred             cEEEEcCCCC
Q 021331           74 DVVYDINGRE   83 (314)
Q Consensus        74 d~vi~~a~~~   83 (314)
                      |+|||+||..
T Consensus        80 DiVI~tAG~~   89 (325)
T cd01336          80 DVAILVGAMP   89 (325)
T ss_pred             CEEEEeCCcC
Confidence            9999999973

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN00106 malate dehydrogenase

Probab=97.58  E-value=0.00019  Score=62.05  Aligned_cols=139  Identities=18%  Similarity=0.155  Sum_probs=82.5

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      +|++|.+|..++..|..++  .+++.++++...  ....     ++.+  ........++.+.+++.+.++  ++|+||+
T Consensus        24 iGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~--g~a~-----Dl~~--~~~~~~i~~~~~~~d~~~~l~--~aDiVVi   92 (323)
T PLN00106         24 LGAAGGIGQPLSLLMKMNPLVSELHLYDIANTP--GVAA-----DVSH--INTPAQVRGFLGDDQLGDALK--GADLVII   92 (323)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCC--eeEc-----hhhh--CCcCceEEEEeCCCCHHHHcC--CCCEEEE
Confidence            5889999999999999776  489999987721  1111     1111  112223335445555778888  9999999


Q ss_pred             cCCCCc--------------ccHHHHHHhCC--CCCcEEEEeeceeec----------cCCCCCccCccccchhhHHHH-
Q 021331           79 INGREA--------------DEVEPILDALP--NLEQFIYCSSAGVYL----------KSDLLPHCESRHKGKLNTESV-  131 (314)
Q Consensus        79 ~a~~~~--------------~~~~~~~~~~~--~~~~~i~~Ss~~v~~----------~~~~~~~~e~~~~~k~~~e~~-  131 (314)
                      +||...              ..++++.+.+.  +..++|+++|.-+-+          .....|....++.++...+++ 
T Consensus        93 tAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~Rl~  172 (323)
T PLN00106         93 PAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRAN  172 (323)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecchHHHHH
Confidence            999732              23455666665  667888888855521          111122222344444443332 


Q ss_pred             ---HHhcCCceEEEecCeeeCCC
Q 021331          132 ---LESKGVNWTSLRPVYIYGPL  151 (314)
Q Consensus       132 ---~~~~~~~~~ilR~~~v~g~~  151 (314)
                         .+..+++..-++ +.|+|.+
T Consensus       173 ~~lA~~lgv~~~~V~-~~ViGeH  194 (323)
T PLN00106        173 TFVAEKKGLDPADVD-VPVVGGH  194 (323)
T ss_pred             HHHHHHhCCChhheE-EEEEEeC
Confidence               345677766664 4566654

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.56  E-value=9.6e-05  Score=60.75  Aligned_cols=65  Identities=22%  Similarity=0.304  Sum_probs=46.0

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc----C-CccEE
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K-GFDVV   76 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~----~-~~d~v   76 (314)
                      .+||.+|.++++.|.++|++|+++++.... .   .           .  ....+|+.+.+++.++++.    . ++|++
T Consensus        22 ~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l-~---~-----------~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiL   84 (227)
T TIGR02114        22 HSTGHLGKIITETFLSAGHEVTLVTTKRAL-K---P-----------E--PHPNLSIREIETTKDLLITLKELVQEHDIL   84 (227)
T ss_pred             CcccHHHHHHHHHHHHCCCEEEEEcChhhc-c---c-----------c--cCCcceeecHHHHHHHHHHHHHHcCCCCEE
Confidence            368999999999999999999998763211 0   0           0  0124688877766655432    1 58999


Q ss_pred             EEcCCCC
Q 021331           77 YDINGRE   83 (314)
Q Consensus        77 i~~a~~~   83 (314)
                      ||+||..
T Consensus        85 VnnAgv~   91 (227)
T TIGR02114        85 IHSMAVS   91 (227)
T ss_pred             EECCEec
Confidence            9999864

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.44  E-value=7.5e-05  Score=62.87  Aligned_cols=82  Identities=21%  Similarity=0.152  Sum_probs=62.3

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |||||.|.-++++|..+|.+-....|+..+....-.          .-+.++-...+.++..+++.++  +.++|+||+|
T Consensus        13 GAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~----------~LG~~~~~~p~~~p~~~~~~~~--~~~VVlncvG   80 (382)
T COG3268          13 GATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRA----------SLGPEAAVFPLGVPAALEAMAS--RTQVVLNCVG   80 (382)
T ss_pred             ccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHH----------hcCccccccCCCCHHHHHHHHh--cceEEEeccc
Confidence            999999999999999999887777788766431111          1233344445556999999999  9999999999


Q ss_pred             CCcccHHHHHHhCC
Q 021331           82 READEVEPILDALP   95 (314)
Q Consensus        82 ~~~~~~~~~~~~~~   95 (314)
                      +.......++++|.
T Consensus        81 Pyt~~g~plv~aC~   94 (382)
T COG3268          81 PYTRYGEPLVAACA   94 (382)
T ss_pred             cccccccHHHHHHH
Confidence            97776667777776

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=97.41  E-value=0.00025  Score=62.03  Aligned_cols=82  Identities=11%  Similarity=0.043  Sum_probs=55.1

Q ss_pred             CCcccccHHH--HHHHHHHCCCeEEEEEcCCcccccC-------CCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC
Q 021331            1 MGGTRFIGVF--LSRLLVKEGHQVTLFTRGKAPIAQQ-------LPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK   71 (314)
Q Consensus         1 tGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~   71 (314)
                      |||++.+|.+  +++.| ..|.+|+++++..+.....       ......+........+..+.+|+++++.+.++++..
T Consensus        47 TGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~lie~I  125 (398)
T PRK13656         47 IGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQKVIELI  125 (398)
T ss_pred             ECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            7999999999  89999 9999999988643221100       000000112222334678899999998887777532


Q ss_pred             -----CccEEEEcCCCC
Q 021331           72 -----GFDVVYDINGRE   83 (314)
Q Consensus        72 -----~~d~vi~~a~~~   83 (314)
                           ++|++||+++..
T Consensus       126 ~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        126 KQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHhcCCCCEEEECCccC
Confidence                 589999998864

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.41  E-value=0.00013  Score=58.53  Aligned_cols=76  Identities=21%  Similarity=0.218  Sum_probs=55.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      +||+|.+|..+++.|.+.|++|++++|+.++......     .+.. ..+.....+|..+.+++.+++.  ++|+||++.
T Consensus        34 lGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~-----~l~~-~~~~~~~~~~~~~~~~~~~~~~--~~diVi~at  105 (194)
T cd01078          34 LGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAAD-----SLRA-RFGEGVGAVETSDDAARAAAIK--GADVVFAAG  105 (194)
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-----HHHh-hcCCcEEEeeCCCHHHHHHHHh--cCCEEEECC
Confidence            5899999999999999999999999998654221110     0100 0234566778888888888888  899999976


Q ss_pred             CCCc
Q 021331           81 GREA   84 (314)
Q Consensus        81 ~~~~   84 (314)
                      +...
T Consensus       106 ~~g~  109 (194)
T cd01078         106 AAGV  109 (194)
T ss_pred             CCCc
Confidence            5433

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.41  E-value=0.00044  Score=56.77  Aligned_cols=72  Identities=25%  Similarity=0.390  Sum_probs=59.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHh-hhcCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~-~~~~~~d~vi~~a~   81 (314)
                      |.|-+|..+|+.|.+.||+|++++++++........         ......+.+|-+|++.|+++ +.  ++|+++-+.+
T Consensus         7 G~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~---------~~~~~~v~gd~t~~~~L~~agi~--~aD~vva~t~   75 (225)
T COG0569           7 GAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD---------ELDTHVVIGDATDEDVLEEAGID--DADAVVAATG   75 (225)
T ss_pred             CCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh---------hcceEEEEecCCCHHHHHhcCCC--cCCEEEEeeC
Confidence            679999999999999999999999998875543321         14688999999999999998 55  8999997777


Q ss_pred             CCcc
Q 021331           82 READ   85 (314)
Q Consensus        82 ~~~~   85 (314)
                      .+..
T Consensus        76 ~d~~   79 (225)
T COG0569          76 NDEV   79 (225)
T ss_pred             CCHH
Confidence            6443

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.35  E-value=0.00051  Score=61.19  Aligned_cols=64  Identities=17%  Similarity=0.136  Sum_probs=48.8

Q ss_pred             ccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC--CccEEEEcCC
Q 021331            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYDING   81 (314)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~--~~d~vi~~a~   81 (314)
                      ||.+|.++++.|..+|++|++++++.+. .  .+           .+  +..+|+++.+++.+++.+.  ++|++||+||
T Consensus       213 SG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~--~~-----------~~--~~~~dv~~~~~~~~~v~~~~~~~DilI~~Aa  276 (399)
T PRK05579        213 SGKMGYALARAAARRGADVTLVSGPVNL-P--TP-----------AG--VKRIDVESAQEMLDAVLAALPQADIFIMAAA  276 (399)
T ss_pred             cchHHHHHHHHHHHCCCEEEEeCCCccc-c--CC-----------CC--cEEEccCCHHHHHHHHHHhcCCCCEEEEccc
Confidence            8999999999999999999999887532 1  11           12  3457999887777766432  5899999998


Q ss_pred             CC
Q 021331           82 RE   83 (314)
Q Consensus        82 ~~   83 (314)
                      ..
T Consensus       277 v~  278 (399)
T PRK05579        277 VA  278 (399)
T ss_pred             cc
Confidence            74

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=97.17  E-value=0.002  Score=52.45  Aligned_cols=77  Identities=16%  Similarity=0.175  Sum_probs=54.2

Q ss_pred             CCcccccHHHHHHHHHHCC-----CeEEEEEcCCcccccCCCCCCchhhhhcc----CceEEEEecCCChhhHHHhhhcC
Q 021331            1 MGGTRFIGVFLSRLLVKEG-----HQVTLFTRGKAPIAQQLPGESDQEFAEFS----SKILHLKGDRKDYDFVKSSLSAK   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~d~~~l~~~~~~~   71 (314)
                      ||++..+|.++|..|++..     .++++.+|+.++......     .+.+++    -.+.++.+|++|..++..+.++.
T Consensus         9 TGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~-----~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di   83 (341)
T KOG1478|consen    9 TGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCA-----ALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDI   83 (341)
T ss_pred             ecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHH-----HHHHhCCCceeEEEEEEEehhhHHHHHHHHHHH
Confidence            7999999999999999874     356777888776432221     222222    36888999999976655554321


Q ss_pred             -----CccEEEEcCCC
Q 021331           72 -----GFDVVYDINGR   82 (314)
Q Consensus        72 -----~~d~vi~~a~~   82 (314)
                           ..|.|+-.||.
T Consensus        84 ~~rf~~ld~iylNAg~   99 (341)
T KOG1478|consen   84 KQRFQRLDYIYLNAGI   99 (341)
T ss_pred             HHHhhhccEEEEcccc
Confidence                 68999988886

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.08  E-value=0.00098  Score=59.06  Aligned_cols=96  Identities=20%  Similarity=0.236  Sum_probs=61.3

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHh-hhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~-~~~~~~d~vi~   78 (314)
                      .||||++|..+++.|.++ ..+|+.+.+..+.. +.+..          ........|..+.+.++.. ++  ++|+||.
T Consensus        44 vGATG~vG~eLlrlL~~hP~~el~~l~s~~saG-~~i~~----------~~~~l~~~~~~~~~~~~~~~~~--~~DvVf~  110 (381)
T PLN02968         44 LGASGYTGAEVRRLLANHPDFEITVMTADRKAG-QSFGS----------VFPHLITQDLPNLVAVKDADFS--DVDAVFC  110 (381)
T ss_pred             ECCCChHHHHHHHHHHhCCCCeEEEEEChhhcC-CCchh----------hCccccCccccceecCCHHHhc--CCCEEEE
Confidence            499999999999999999 57999998765432 11110          1111222344333333322 45  8999999


Q ss_pred             cCCCCcccHHHHHHhCCCCCcEEEEeeceeecc
Q 021331           79 INGREADEVEPILDALPNLEQFIYCSSAGVYLK  111 (314)
Q Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~i~~Ss~~v~~~  111 (314)
                      +.+.  ....+++..+...+++|-+|+++.+.+
T Consensus       111 Alp~--~~s~~i~~~~~~g~~VIDlSs~fRl~~  141 (381)
T PLN02968        111 CLPH--GTTQEIIKALPKDLKIVDLSADFRLRD  141 (381)
T ss_pred             cCCH--HHHHHHHHHHhCCCEEEEcCchhccCC
Confidence            8764  345566666554468999999876654

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=96.81  E-value=0.0035  Score=49.61  Aligned_cols=65  Identities=17%  Similarity=0.241  Sum_probs=39.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCC--hhhHHHhhhcCCccEEEEcC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~l~~~~~~~~~d~vi~~a   80 (314)
                      +||.+|.+|++++..+|++|+.+.....-..   +           .+++.+.+.-.+  .+.+.+.+.  +.|++|++|
T Consensus        27 SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~---p-----------~~~~~i~v~sa~em~~~~~~~~~--~~Di~I~aA   90 (185)
T PF04127_consen   27 SSGKMGAALAEEAARRGAEVTLIHGPSSLPP---P-----------PGVKVIRVESAEEMLEAVKELLP--SADIIIMAA   90 (185)
T ss_dssp             --SHHHHHHHHHHHHTT-EEEEEE-TTS------------------TTEEEEE-SSHHHHHHHHHHHGG--GGSEEEE-S
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCccccc---c-----------ccceEEEecchhhhhhhhccccC--cceeEEEec
Confidence            6899999999999999999999988743211   1           456666543221  133444444  679999999


Q ss_pred             CCC
Q 021331           81 GRE   83 (314)
Q Consensus        81 ~~~   83 (314)
                      ++.
T Consensus        91 AVs   93 (185)
T PF04127_consen   91 AVS   93 (185)
T ss_dssp             B--
T ss_pred             chh
Confidence            873

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.70  E-value=0.0042  Score=53.86  Aligned_cols=143  Identities=13%  Similarity=0.078  Sum_probs=78.6

Q ss_pred             CCcccccHHHHHHHHHHCCC-------eEEEEEcCCcc--cccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAP--IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~   71 (314)
                      +|++|.+|..++-.|...+.       +++.++.+...  ......+..+ ...-+..++.+.   -    ...+.++  
T Consensus         8 iGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~-~~~~~~~~~~i~---~----~~~~~~~--   77 (322)
T cd01338           8 TGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELED-CAFPLLAEIVIT---D----DPNVAFK--   77 (322)
T ss_pred             ECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhh-ccccccCceEEe---c----CcHHHhC--
Confidence            58889999999999998873       79999885432  2111111100 000000112211   1    1234556  


Q ss_pred             CccEEEEcCCCCcc--------------cHHHHHHhCC--C--CCcEEEEeece-----eeccCC-CCCccCccccchhh
Q 021331           72 GFDVVYDINGREAD--------------EVEPILDALP--N--LEQFIYCSSAG-----VYLKSD-LLPHCESRHKGKLN  127 (314)
Q Consensus        72 ~~d~vi~~a~~~~~--------------~~~~~~~~~~--~--~~~~i~~Ss~~-----v~~~~~-~~~~~e~~~~~k~~  127 (314)
                      ++|+||.+||....              ..+.+...+.  .  ...+|.+|..-     +.-... ..|....++.++..
T Consensus        78 daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~ViG~t~LD  157 (322)
T cd01338          78 DADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAMTRLD  157 (322)
T ss_pred             CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHheEEehHHH
Confidence            99999999987321              1223333332  1  33455555311     111112 23433356666766


Q ss_pred             HHHHH----HhcCCceEEEecCeeeCCCCC
Q 021331          128 TESVL----ESKGVNWTSLRPVYIYGPLNY  153 (314)
Q Consensus       128 ~e~~~----~~~~~~~~ilR~~~v~g~~~~  153 (314)
                      .+++.    +..+++...+|...|||++..
T Consensus       158 s~Rl~~~la~~lgv~~~~v~~~~V~GeHG~  187 (322)
T cd01338         158 HNRAKSQLAKKAGVPVTDVKNMVIWGNHSP  187 (322)
T ss_pred             HHHHHHHHHHHhCcChhHeEEEEEEeCCcc
Confidence            66554    457899999999899999743

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14982 acyl-ACP reductase; Provisional

Probab=96.65  E-value=0.0016  Score=56.42  Aligned_cols=63  Identities=22%  Similarity=0.259  Sum_probs=44.2

Q ss_pred             CCcccccHHHHHHHHHHC-C-CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE-G-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      |||+|++|+.++++|.++ | .+++++.|+..+... +.           .  ++..+++.   .+.+++.  ++|+|||
T Consensus       161 tGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~-La-----------~--el~~~~i~---~l~~~l~--~aDiVv~  221 (340)
T PRK14982        161 VGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQE-LQ-----------A--ELGGGKIL---SLEEALP--EADIVVW  221 (340)
T ss_pred             EccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHH-HH-----------H--HhccccHH---hHHHHHc--cCCEEEE
Confidence            699999999999999865 4 689999887554221 11           0  11123333   3667777  8999999


Q ss_pred             cCCC
Q 021331           79 INGR   82 (314)
Q Consensus        79 ~a~~   82 (314)
                      +++.
T Consensus       222 ~ts~  225 (340)
T PRK14982        222 VASM  225 (340)
T ss_pred             CCcC
Confidence            9886

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=96.58  E-value=0.0026  Score=54.41  Aligned_cols=74  Identities=12%  Similarity=0.136  Sum_probs=51.5

Q ss_pred             CCcccccHHHHHHHHHHCCCe-EEEEEcCC---cccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGK---APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~v   76 (314)
                      +|| |.+|++++..|.+.|.. |++++|+.   ++... +.    +.+.+....+.+..+|+.+.+.+.+.+.  ..|+|
T Consensus       132 ~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~-l~----~~l~~~~~~~~~~~~d~~~~~~~~~~~~--~~Dil  203 (289)
T PRK12548        132 IGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQ-TA----EKIKQEVPECIVNVYDLNDTEKLKAEIA--SSDIL  203 (289)
T ss_pred             ECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHH-HH----HHHhhcCCCceeEEechhhhhHHHhhhc--cCCEE
Confidence            477 89999999999999975 99999986   22211 11    1111112345566788888888888777  78999


Q ss_pred             EEcCCC
Q 021331           77 YDINGR   82 (314)
Q Consensus        77 i~~a~~   82 (314)
                      ||+...
T Consensus       204 INaTp~  209 (289)
T PRK12548        204 VNATLV  209 (289)
T ss_pred             EEeCCC
Confidence            998654

>PRK05086 malate dehydrogenase; Provisional

Probab=96.39  E-value=0.011  Score=51.21  Aligned_cols=97  Identities=20%  Similarity=0.236  Sum_probs=58.7

Q ss_pred             CCcccccHHHHHHHHHH-C--CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVK-E--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~-~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      +||||.+|.+++..|.. .  ++++++++|++.. .....     .+.+. .....+.+  .+.+++.+.++  ++|+||
T Consensus         6 IGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~al-----Dl~~~-~~~~~i~~--~~~~d~~~~l~--~~DiVI   74 (312)
T PRK05086          6 LGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAV-----DLSHI-PTAVKIKG--FSGEDPTPALE--GADVVL   74 (312)
T ss_pred             ECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceeh-----hhhcC-CCCceEEE--eCCCCHHHHcC--CCCEEE
Confidence            58999999999998855 2  4688888887432 11000     11111 11122333  22344556667  899999


Q ss_pred             EcCCCCc--------------ccHHHHHHhCC--CCCcEEEEeecee
Q 021331           78 DINGREA--------------DEVEPILDALP--NLEQFIYCSSAGV  108 (314)
Q Consensus        78 ~~a~~~~--------------~~~~~~~~~~~--~~~~~i~~Ss~~v  108 (314)
                      .++|...              ...+++++.+.  +.+++|.+.|.-+
T Consensus        75 itaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~  121 (312)
T PRK05086         75 ISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPV  121 (312)
T ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCch
Confidence            9999732              23455666665  6677888777544

>cd00704 MDH Malate dehydrogenase

Probab=96.38  E-value=0.0076  Score=52.31  Aligned_cols=73  Identities=12%  Similarity=0.025  Sum_probs=42.6

Q ss_pred             CCcccccHHHHHHHHHHCC-------CeEEEEEcCC--cccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC
Q 021331            1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGK--APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-------~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~   71 (314)
                      +||+|.+|+.++..|...+       ++++.++++.  +.......+..+ ...-+...+     .+.  ....+.++  
T Consensus         6 iGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d-~~~~~~~~~-----~i~--~~~~~~~~--   75 (323)
T cd00704           6 TGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQD-CAFPLLKGV-----VIT--TDPEEAFK--   75 (323)
T ss_pred             ECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhh-hcccccCCc-----EEe--cChHHHhC--
Confidence            6899999999999998765       2588898876  321111110000 000000111     111  23456677  


Q ss_pred             CccEEEEcCCCC
Q 021331           72 GFDVVYDINGRE   83 (314)
Q Consensus        72 ~~d~vi~~a~~~   83 (314)
                      ++|+||++||..
T Consensus        76 ~aDiVVitAG~~   87 (323)
T cd00704          76 DVDVAILVGAFP   87 (323)
T ss_pred             CCCEEEEeCCCC
Confidence            999999999973

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK04148 hypothetical protein; Provisional

Probab=96.36  E-value=0.0087  Score=44.41  Aligned_cols=76  Identities=13%  Similarity=0.155  Sum_probs=55.8

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |+| .|.++++.|.+.|++|++++.++.......           ...+.++.+|+.+++.  ++.+  ++|.|+.+-. 
T Consensus        24 G~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-----------~~~~~~v~dDlf~p~~--~~y~--~a~liysirp-   86 (134)
T PRK04148         24 GIG-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-----------KLGLNAFVDDLFNPNL--EIYK--NAKLIYSIRP-   86 (134)
T ss_pred             Eec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-----------HhCCeEEECcCCCCCH--HHHh--cCCEEEEeCC-
Confidence            457 788899999999999999999987533211           1468899999998873  3444  7888876653 


Q ss_pred             CcccHHHHHHhCC
Q 021331           83 EADEVEPILDALP   95 (314)
Q Consensus        83 ~~~~~~~~~~~~~   95 (314)
                      ..+....+++.++
T Consensus        87 p~el~~~~~~la~   99 (134)
T PRK04148         87 PRDLQPFILELAK   99 (134)
T ss_pred             CHHHHHHHHHHHH
Confidence            3555667777776

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.21  E-value=0.019  Score=48.96  Aligned_cols=113  Identities=16%  Similarity=0.167  Sum_probs=67.9

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|..+++.|...|.+|++.+|+.........           .+...+     ..+.+.+.+.  +.|+||++...
T Consensus       158 G~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~-----------~g~~~~-----~~~~l~~~l~--~aDiVint~P~  219 (287)
T TIGR02853       158 GFGRTGMTIARTFSALGARVFVGARSSADLARITE-----------MGLIPF-----PLNKLEEKVA--EIDIVINTIPA  219 (287)
T ss_pred             cChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------CCCeee-----cHHHHHHHhc--cCCEEEECCCh
Confidence            45899999999999999999999998754221100           122211     2345677777  89999998754


Q ss_pred             CcccHHHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCceEEEe-cCeeeCCC
Q 021331           83 EADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLR-PVYIYGPL  151 (314)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~~~ilR-~~~v~g~~  151 (314)
                      ... ....++.++...-+|-++|.     +...         ..   +..++.|++..... .+..|+|.
T Consensus       220 ~ii-~~~~l~~~k~~aliIDlas~-----Pg~t---------df---~~Ak~~G~~a~~~~glPg~~ap~  271 (287)
T TIGR02853       220 LVL-TADVLSKLPKHAVIIDLASK-----PGGT---------DF---EYAKKRGIKALLAPGLPGIVAPK  271 (287)
T ss_pred             HHh-CHHHHhcCCCCeEEEEeCcC-----CCCC---------CH---HHHHHCCCEEEEeCCCCcccCch
Confidence            322 24455666544445545541     1111         11   34567787765544 45556664

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.20  E-value=0.011  Score=51.29  Aligned_cols=64  Identities=14%  Similarity=0.067  Sum_probs=42.3

Q ss_pred             CCcccccHHHHHHHHHHCC-------CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChh-----------
Q 021331            1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD-----------   62 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-----------   62 (314)
                      +|++|.+|+.++..|...+       ++++.+++++...                 ..+-...|+.|..           
T Consensus         5 iGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-----------------~a~g~~~Dl~d~~~~~~~~~~~~~   67 (324)
T TIGR01758         5 TGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-----------------VLEGVVMELMDCAFPLLDGVVPTH   67 (324)
T ss_pred             ECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-----------------ccceeEeehhcccchhcCceeccC
Confidence            5889999999999998754       2688999865431                 0111122222221           


Q ss_pred             hHHHhhhcCCccEEEEcCCCC
Q 021331           63 FVKSSLSAKGFDVVYDINGRE   83 (314)
Q Consensus        63 ~l~~~~~~~~~d~vi~~a~~~   83 (314)
                      ...+.++  ++|+||++||..
T Consensus        68 ~~~~~~~--~aDiVVitAG~~   86 (324)
T TIGR01758        68 DPAVAFT--DVDVAILVGAFP   86 (324)
T ss_pred             ChHHHhC--CCCEEEEcCCCC
Confidence            2345666  899999999974

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.15  E-value=0.0048  Score=48.02  Aligned_cols=106  Identities=23%  Similarity=0.192  Sum_probs=60.5

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|-+|..+++.|+++||+|++.+|++++......           .++.       -.++..++.+  ++|+||-+...
T Consensus         8 GlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~-----------~g~~-------~~~s~~e~~~--~~dvvi~~v~~   67 (163)
T PF03446_consen    8 GLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE-----------AGAE-------VADSPAEAAE--QADVVILCVPD   67 (163)
T ss_dssp             --SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH-----------TTEE-------EESSHHHHHH--HBSEEEE-SSS
T ss_pred             chHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH-----------hhhh-------hhhhhhhHhh--cccceEeeccc
Confidence            56999999999999999999999999766432221           2211       1123456666  77888877543


Q ss_pred             CcccHHHHHHh------CCCCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCceEEEe
Q 021331           83 EADEVEPILDA------LPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLR  143 (314)
Q Consensus        83 ~~~~~~~~~~~------~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~~~ilR  143 (314)
                       ...+..++..      +...+-||-.||..              ........+.+.+.|+.++-.-
T Consensus        68 -~~~v~~v~~~~~i~~~l~~g~iiid~sT~~--------------p~~~~~~~~~~~~~g~~~vdap  119 (163)
T PF03446_consen   68 -DDAVEAVLFGENILAGLRPGKIIIDMSTIS--------------PETSRELAERLAAKGVRYVDAP  119 (163)
T ss_dssp             -HHHHHHHHHCTTHGGGS-TTEEEEE-SS----------------HHHHHHHHHHHHHTTEEEEEEE
T ss_pred             -chhhhhhhhhhHHhhccccceEEEecCCcc--------------hhhhhhhhhhhhhccceeeeee
Confidence             2333343332      33334455444421              2224455566667777777744

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.15  E-value=0.0064  Score=44.19  Aligned_cols=68  Identities=18%  Similarity=0.212  Sum_probs=51.5

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|..+++.|.+.+.+|+++++++.......           ..++.++.+|.++++.++++- -.+++.++-+...
T Consensus         5 G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~-----------~~~~~~i~gd~~~~~~l~~a~-i~~a~~vv~~~~~   72 (116)
T PF02254_consen    5 GYGRIGREIAEQLKEGGIDVVVIDRDPERVEELR-----------EEGVEVIYGDATDPEVLERAG-IEKADAVVILTDD   72 (116)
T ss_dssp             S-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-----------HTTSEEEES-TTSHHHHHHTT-GGCESEEEEESSS
T ss_pred             cCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH-----------hcccccccccchhhhHHhhcC-ccccCEEEEccCC
Confidence            4588999999999997779999999986633222           256889999999999988853 2378888877653

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=96.10  E-value=0.016  Score=51.59  Aligned_cols=65  Identities=18%  Similarity=0.241  Sum_probs=47.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhH-HHhhhcC--CccEEEEc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-KSSLSAK--GFDVVYDI   79 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l-~~~~~~~--~~d~vi~~   79 (314)
                      +||.+|.++++.|..+|++|+.+.++....   .+           .++  ...|+.+.+++ +.+++..  ++|++|++
T Consensus       209 SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---~~-----------~~~--~~~~v~~~~~~~~~~~~~~~~~~D~~i~~  272 (390)
T TIGR00521       209 SSGKMGLALAEAAYKRGADVTLITGPVSLL---TP-----------PGV--KSIKVSTAEEMLEAALNELAKDFDIFISA  272 (390)
T ss_pred             CcchHHHHHHHHHHHCCCEEEEeCCCCccC---CC-----------CCc--EEEEeccHHHHHHHHHHhhcccCCEEEEc
Confidence            368899999999999999999988765431   11           222  45788888777 4444221  58999999


Q ss_pred             CCCC
Q 021331           80 NGRE   83 (314)
Q Consensus        80 a~~~   83 (314)
                      |+..
T Consensus       273 Aavs  276 (390)
T TIGR00521       273 AAVA  276 (390)
T ss_pred             cccc
Confidence            9974

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.04  E-value=0.021  Score=49.99  Aligned_cols=89  Identities=17%  Similarity=0.123  Sum_probs=52.9

Q ss_pred             CCcccccHHHHHHHHHHCCC---eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      .||||++|..|++.|.+++|   +++++.+..+... .+.          ..+......|+.+.     .+.  ++|+||
T Consensus         7 vGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~-~l~----------~~g~~i~v~d~~~~-----~~~--~vDvVf   68 (334)
T PRK14874          7 VGATGAVGREMLNILEERNFPVDKLRLLASARSAGK-ELS----------FKGKELKVEDLTTF-----DFS--GVDIAL   68 (334)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCC-eee----------eCCceeEEeeCCHH-----HHc--CCCEEE
Confidence            49999999999999999876   4577776654321 111          12234444455431     234  899999


Q ss_pred             EcCCCCcccHHHHHHhC-CCCCcEEEEeeceee
Q 021331           78 DINGREADEVEPILDAL-PNLEQFIYCSSAGVY  109 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~-~~~~~~i~~Ss~~v~  109 (314)
                      .+.+..  ....++... .....+|=.|+..-+
T Consensus        69 ~A~g~g--~s~~~~~~~~~~G~~VIDlS~~~R~   99 (334)
T PRK14874         69 FSAGGS--VSKKYAPKAAAAGAVVIDNSSAFRM   99 (334)
T ss_pred             ECCChH--HHHHHHHHHHhCCCEEEECCchhhc
Confidence            888643  233344433 222356656665433

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.03  E-value=0.017  Score=46.46  Aligned_cols=170  Identities=16%  Similarity=0.138  Sum_probs=93.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEE--------ecCCChhhHH---Hhhh
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK--------GDRKDYDFVK---SSLS   69 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~D~~d~~~l~---~~~~   69 (314)
                      ||+|-.||..++..+...+-+.....+......  .            .++....        +|.+....+.   ++..
T Consensus        12 TGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~------------~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r   77 (253)
T KOG1204|consen   12 TGASRGIGTGSVATILAEDDEALRYGVARLLAE--L------------EGLKVAYGDDFVHVVGDITEEQLLGALREAPR   77 (253)
T ss_pred             ecCCCCccHHHHHHHHhcchHHHHHhhhccccc--c------------cceEEEecCCcceechHHHHHHHHHHHHhhhh
Confidence            799999999999988888755444333322211  1            2333333        3444433222   2222


Q ss_pred             cC--CccEEEEcCCCCcc------------c---------------HHHHHHhCCC---CCcEEEEeeceeeccCCCCCc
Q 021331           70 AK--GFDVVYDINGREAD------------E---------------VEPILDALPN---LEQFIYCSSAGVYLKSDLLPH  117 (314)
Q Consensus        70 ~~--~~d~vi~~a~~~~~------------~---------------~~~~~~~~~~---~~~~i~~Ss~~v~~~~~~~~~  117 (314)
                      ..  +-|.|||+||.-..            .               ....+....+   .+.+|++||....-.-...  
T Consensus        78 ~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~w--  155 (253)
T KOG1204|consen   78 KKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSW--  155 (253)
T ss_pred             hcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHH--
Confidence            11  58999999996210            0               1122222332   3678999985543221111  


Q ss_pred             cCccccchhhHHHHHH-----hc-CCceEEEecCeeeCCCC-----CCchhHH---HHHHHHcCCCeecCCCCCceeeee
Q 021331          118 CESRHKGKLNTESVLE-----SK-GVNWTSLRPVYIYGPLN-----YNPVEEW---FFHRLKAGRPIPIPGSGIQVTQLG  183 (314)
Q Consensus       118 ~e~~~~~k~~~e~~~~-----~~-~~~~~ilR~~~v~g~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i  183 (314)
                       ..|+.+|+..+.+..     ++ ++.+..++||.+-.+-+     ...+.+.   +++.++..            -.++
T Consensus       156 -a~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~------------~~ll  222 (253)
T KOG1204|consen  156 -AAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKES------------GQLL  222 (253)
T ss_pred             -HHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhc------------CCcC
Confidence             158889988887763     44 67788888887654311     0111121   22222221            2455


Q ss_pred             eHHHHHHHHHHHhcCC
Q 021331          184 HVKDLARAFVQVLGNE  199 (314)
Q Consensus       184 ~~~D~a~~~~~~l~~~  199 (314)
                      ...+.++.+..++.+.
T Consensus       223 ~~~~~a~~l~~L~e~~  238 (253)
T KOG1204|consen  223 DPQVTAKVLAKLLEKG  238 (253)
T ss_pred             ChhhHHHHHHHHHHhc
Confidence            6678888888888765

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=95.93  E-value=0.021  Score=49.38  Aligned_cols=97  Identities=19%  Similarity=0.224  Sum_probs=54.6

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCC-----------C-CCCc-hhhhhccCceEEEEecCCChhhHHHhhh
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL-----------P-GESD-QEFAEFSSKILHLKGDRKDYDFVKSSLS   69 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~-~~~~-~~~~~~~~~~~~~~~D~~d~~~l~~~~~   69 (314)
                      |+|.+|..++..|+++|++|++.+|+++......           . ...+ ........++.+       ..++.++++
T Consensus         9 G~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~-------~~~~~~a~~   81 (308)
T PRK06129          9 GAGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRV-------TDSLADAVA   81 (308)
T ss_pred             CccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEE-------ECcHHHhhC
Confidence            4799999999999999999999999875432100           0 0000 000000011111       123556666


Q ss_pred             cCCccEEEEcCCCCcccHHHHHHhCC--CCCcEEEEeecee
Q 021331           70 AKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGV  108 (314)
Q Consensus        70 ~~~~d~vi~~a~~~~~~~~~~~~~~~--~~~~~i~~Ss~~v  108 (314)
                        ++|+|+.+........+.++..+.  ....+++.||...
T Consensus        82 --~ad~Vi~avpe~~~~k~~~~~~l~~~~~~~~ii~ssts~  120 (308)
T PRK06129         82 --DADYVQESAPENLELKRALFAELDALAPPHAILASSTSA  120 (308)
T ss_pred             --CCCEEEECCcCCHHHHHHHHHHHHHhCCCcceEEEeCCC
Confidence              899999988765444444444433  2224455666543

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=95.86  E-value=0.059  Score=46.69  Aligned_cols=87  Identities=20%  Similarity=0.208  Sum_probs=61.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|...++.+...|.+|++++|+.++.....+           -+...+...- |++.++..-+  .+|+++.+++ 
T Consensus       174 G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-----------lGAd~~i~~~-~~~~~~~~~~--~~d~ii~tv~-  238 (339)
T COG1064         174 GAGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-----------LGADHVINSS-DSDALEAVKE--IADAIIDTVG-  238 (339)
T ss_pred             CCcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-----------hCCcEEEEcC-CchhhHHhHh--hCcEEEECCC-
Confidence            34689999999999999999999999987432111           2233333322 6666666554  4999999998 


Q ss_pred             CcccHHHHHHhCCCCCcEEEEee
Q 021331           83 EADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                       .......+++++...+++.++-
T Consensus       239 -~~~~~~~l~~l~~~G~~v~vG~  260 (339)
T COG1064         239 -PATLEPSLKALRRGGTLVLVGL  260 (339)
T ss_pred             -hhhHHHHHHHHhcCCEEEEECC
Confidence             5556677788886668886654

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.83  E-value=0.045  Score=46.45  Aligned_cols=93  Identities=16%  Similarity=0.174  Sum_probs=61.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      +|+.| +|+.-++.....|++|++++++..+....+.          ..+.+.+..-..|++.++.+.+  -.|.++|++
T Consensus       188 ~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~----------~LGAd~fv~~~~d~d~~~~~~~--~~dg~~~~v  254 (360)
T KOG0023|consen  188 VGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIK----------SLGADVFVDSTEDPDIMKAIMK--TTDGGIDTV  254 (360)
T ss_pred             ecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHH----------hcCcceeEEecCCHHHHHHHHH--hhcCcceee
Confidence            36666 9999999999999999999999755333332          1345555444448887777776  555555554


Q ss_pred             CC-CcccHHHHHHhCCCCCcEEEEeec
Q 021331           81 GR-EADEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        81 ~~-~~~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      .. .......++..++...++|+++-.
T Consensus       255 ~~~a~~~~~~~~~~lk~~Gt~V~vg~p  281 (360)
T KOG0023|consen  255 SNLAEHALEPLLGLLKVNGTLVLVGLP  281 (360)
T ss_pred             eeccccchHHHHHHhhcCCEEEEEeCc
Confidence            32 122345667777756688887753

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.76  E-value=0.014  Score=53.45  Aligned_cols=68  Identities=15%  Similarity=0.255  Sum_probs=53.6

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHh-hhcCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~-~~~~~~d~vi~~a~   81 (314)
                      |.|.+|.++++.|.+.|++|++++++++.......          ..++.++.+|.++++.+.++ +.  ++|.||-+..
T Consensus         7 G~G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~----------~~~~~~~~gd~~~~~~l~~~~~~--~a~~vi~~~~   74 (453)
T PRK09496          7 GAGQVGYTLAENLSGENNDVTVIDTDEERLRRLQD----------RLDVRTVVGNGSSPDVLREAGAE--DADLLIAVTD   74 (453)
T ss_pred             CCCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh----------hcCEEEEEeCCCCHHHHHHcCCC--cCCEEEEecC
Confidence            34999999999999999999999998765332111          14688999999999988887 66  8999887765


Q ss_pred             C
Q 021331           82 R   82 (314)
Q Consensus        82 ~   82 (314)
                      .
T Consensus        75 ~   75 (453)
T PRK09496         75 S   75 (453)
T ss_pred             C
Confidence            3

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.66  E-value=0.14  Score=41.21  Aligned_cols=105  Identities=17%  Similarity=0.241  Sum_probs=54.1

Q ss_pred             cccccHHHHHHHHHHCC-CeEEEEEcCCccc---ccC--CCC--C---------CchhhhhccCceEEEE--ecCCC-hh
Q 021331            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPI---AQQ--LPG--E---------SDQEFAEFSSKILHLK--GDRKD-YD   62 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~~~---~~~--~~~--~---------~~~~~~~~~~~~~~~~--~D~~d-~~   62 (314)
                      |.|.+|.++++.|...| .++++++.+.-..   .++  +..  .         ..+.+.+..+.+++..  .++.+ .+
T Consensus        26 G~gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~~~~~~~~~~  105 (198)
T cd01485          26 GAGALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIVEEDSLSNDS  105 (198)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEEecccccchh
Confidence            44669999999999999 5788888764321   111  000  0         0011222233333333  23321 33


Q ss_pred             hHHHhhhcCCccEEEEcCCCCcccHHHHHHhCC-CCCcEEEEeeceeec
Q 021331           63 FVKSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (314)
Q Consensus        63 ~l~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss~~v~~  110 (314)
                      ...+.++  ++|+||.+... ......+-+.|. ....+|+.++.+.+|
T Consensus       106 ~~~~~~~--~~dvVi~~~d~-~~~~~~ln~~c~~~~ip~i~~~~~G~~G  151 (198)
T cd01485         106 NIEEYLQ--KFTLVIATEEN-YERTAKVNDVCRKHHIPFISCATYGLIG  151 (198)
T ss_pred             hHHHHHh--CCCEEEECCCC-HHHHHHHHHHHHHcCCCEEEEEeecCEE
Confidence            4455565  67777765332 333333444455 334666666655544

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=95.42  E-value=0.05  Score=45.74  Aligned_cols=80  Identities=19%  Similarity=0.145  Sum_probs=50.6

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEEE-cCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      +|++|.+|+.+++.+.+. +.+++++. ++.+.... .                 -..++...+++.+++.  ++|+||+
T Consensus         7 iG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~-~-----------------~~~~i~~~~dl~~ll~--~~DvVid   66 (257)
T PRK00048          7 AGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVG-Q-----------------GALGVAITDDLEAVLA--DADVLID   66 (257)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccc-c-----------------CCCCccccCCHHHhcc--CCCEEEE
Confidence            478899999999998875 67888754 44333111 0                 1123333455677776  7999999


Q ss_pred             cCCCCcccHHHHHHhCCCCCcEE
Q 021331           79 INGREADEVEPILDALPNLEQFI  101 (314)
Q Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~i  101 (314)
                      ++.+... ...+..++...+++|
T Consensus        67 ~t~p~~~-~~~~~~al~~G~~vv   88 (257)
T PRK00048         67 FTTPEAT-LENLEFALEHGKPLV   88 (257)
T ss_pred             CCCHHHH-HHHHHHHHHcCCCEE
Confidence            9865443 444455555556777

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.36  E-value=0.091  Score=45.99  Aligned_cols=104  Identities=20%  Similarity=0.246  Sum_probs=62.7

Q ss_pred             cccccHHHHHHHHHHCCC-eEEEEEcCCccc---ccCCC-CCC------------chhhhhccCc--eEEEEecCCChhh
Q 021331            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI---AQQLP-GES------------DQEFAEFSSK--ILHLKGDRKDYDF   63 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~~~-~~~------------~~~~~~~~~~--~~~~~~D~~d~~~   63 (314)
                      |.|.+|+++++.|...|. ++++++++.-..   .++.. .+.            .+.+.+..+.  ++.+..|++ ++.
T Consensus        31 G~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~~~~~-~~~  109 (338)
T PRK12475         31 GAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVVTDVT-VEE  109 (338)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEeccCC-HHH
Confidence            468899999999999996 888899875321   11110 000            0222222233  444555664 456


Q ss_pred             HHHhhhcCCccEEEEcCCCCcccHHHHHHhCC-CCCcEEEEeeceeec
Q 021331           64 VKSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (314)
Q Consensus        64 l~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss~~v~~  110 (314)
                      +.++++  ++|+||.+... ...-..+-+.|. ....+|+.+..+.+|
T Consensus       110 ~~~~~~--~~DlVid~~D~-~~~r~~in~~~~~~~ip~i~~~~~g~~G  154 (338)
T PRK12475        110 LEELVK--EVDLIIDATDN-FDTRLLINDLSQKYNIPWIYGGCVGSYG  154 (338)
T ss_pred             HHHHhc--CCCEEEEcCCC-HHHHHHHHHHHHHcCCCEEEEEecccEE
Confidence            778887  89999998753 222222334454 445788887766665

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=95.27  E-value=0.035  Score=48.66  Aligned_cols=87  Identities=15%  Similarity=0.134  Sum_probs=50.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEE---EEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVT---LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      .||||++|..|++.|.+++|.+.   .+.+..+.. ..+.          ..+......|+. .    ..+.  ++|+||
T Consensus         5 vGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g-~~~~----------~~~~~~~~~~~~-~----~~~~--~~D~v~   66 (339)
T TIGR01296         5 VGATGAVGQEMLKILEERNFPIDKLVLLASDRSAG-RKVT----------FKGKELEVNEAK-I----ESFE--GIDIAL   66 (339)
T ss_pred             EcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCC-Ceee----------eCCeeEEEEeCC-h----HHhc--CCCEEE
Confidence            49999999999999999887644   444554331 1111          123455555663 1    2345  899999


Q ss_pred             EcCCCCcccHHHHHHhC-CCCCcEEEEeece
Q 021331           78 DINGREADEVEPILDAL-PNLEQFIYCSSAG  107 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~-~~~~~~i~~Ss~~  107 (314)
                      .+++...  ...++..+ ....++|=.|++.
T Consensus        67 ~a~g~~~--s~~~a~~~~~~G~~VID~ss~~   95 (339)
T TIGR01296        67 FSAGGSV--SKEFAPKAAKCGAIVIDNTSAF   95 (339)
T ss_pred             ECCCHHH--HHHHHHHHHHCCCEEEECCHHH
Confidence            9988643  22333332 2223555555543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.25  E-value=0.033  Score=52.49  Aligned_cols=68  Identities=10%  Similarity=0.136  Sum_probs=52.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|+.+++.|.++|++|++++.+++......           ..+...+.+|.+|++.++++- -.++|.++-+.+.
T Consensus       424 G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~-----------~~g~~~i~GD~~~~~~L~~a~-i~~a~~viv~~~~  491 (558)
T PRK10669        424 GYGRVGSLLGEKLLAAGIPLVVIETSRTRVDELR-----------ERGIRAVLGNAANEEIMQLAH-LDCARWLLLTIPN  491 (558)
T ss_pred             CCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-----------HCCCeEEEcCCCCHHHHHhcC-ccccCEEEEEcCC
Confidence            5699999999999999999999998876633221           157889999999999888753 2378877655443

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.15  E-value=0.038  Score=55.06  Aligned_cols=89  Identities=13%  Similarity=0.016  Sum_probs=60.1

Q ss_pred             cccccHHHHHHHHHHCC-Ce-------------EEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhh
Q 021331            3 GTRFIGVFLSRLLVKEG-HQ-------------VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL   68 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~   68 (314)
                      |+|++|+.+++.|.+.+ ++             |++.+++.......         .+..+++..+..|+.|.+++.+++
T Consensus       576 GAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~l---------a~~~~~~~~v~lDv~D~e~L~~~v  646 (1042)
T PLN02819        576 GAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKET---------VEGIENAEAVQLDVSDSESLLKYV  646 (1042)
T ss_pred             CCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHH---------HHhcCCCceEEeecCCHHHHHHhh
Confidence            45999999999998763 33             66677665443211         111246778999999999999998


Q ss_pred             hcCCccEEEEcCCCCcccHHHHHHhCC-CCCcEEEEe
Q 021331           69 SAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCS  104 (314)
Q Consensus        69 ~~~~~d~vi~~a~~~~~~~~~~~~~~~-~~~~~i~~S  104 (314)
                      +  ++|+||++..... + ..++.+|. ..++++-.|
T Consensus       647 ~--~~DaVIsalP~~~-H-~~VAkaAieaGkHvv~ek  679 (1042)
T PLN02819        647 S--QVDVVISLLPASC-H-AVVAKACIELKKHLVTAS  679 (1042)
T ss_pred             c--CCCEEEECCCchh-h-HHHHHHHHHcCCCEEECc
Confidence            8  8999999987632 2 33444443 444665433

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.11  E-value=0.019  Score=45.31  Aligned_cols=83  Identities=17%  Similarity=0.093  Sum_probs=54.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+++++.|..-|.+|++.+|.........           ..++        ...++++++.  ++|+|+.+...
T Consensus        43 G~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-----------~~~~--------~~~~l~ell~--~aDiv~~~~pl  101 (178)
T PF02826_consen   43 GYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD-----------EFGV--------EYVSLDELLA--QADIVSLHLPL  101 (178)
T ss_dssp             STSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH-----------HTTE--------EESSHHHHHH--H-SEEEE-SSS
T ss_pred             EEcCCcCeEeeeeecCCceeEEecccCChhhhcc-----------cccc--------eeeehhhhcc--hhhhhhhhhcc
Confidence            6799999999999999999999999987632000           0011        2235778888  89999877664


Q ss_pred             Cc----ccHHHHHHhCCCCCcEEEEeec
Q 021331           83 EA----DEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        83 ~~----~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      +.    .-....+..|+....||.++-.
T Consensus       102 t~~T~~li~~~~l~~mk~ga~lvN~aRG  129 (178)
T PF02826_consen  102 TPETRGLINAEFLAKMKPGAVLVNVARG  129 (178)
T ss_dssp             STTTTTSBSHHHHHTSTTTEEEEESSSG
T ss_pred             ccccceeeeeeeeeccccceEEEeccch
Confidence            32    2245677777765566665543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.09  E-value=0.047  Score=47.66  Aligned_cols=89  Identities=15%  Similarity=0.144  Sum_probs=50.8

Q ss_pred             CCcccccHHHHHHHHHHCCCe---EEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQ---VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      +||||++|..+++.|.+++|.   +..+... +...+.+.          ..+   ...++.+.+.. + ++  ++|+||
T Consensus        10 vGATG~vG~eLlrlL~~~~hP~~~l~~v~s~-~~aG~~l~----------~~~---~~l~~~~~~~~-~-~~--~vD~vF   71 (336)
T PRK05671         10 VGATGTVGEALVQILEERDFPVGTLHLLASS-ESAGHSVP----------FAG---KNLRVREVDSF-D-FS--QVQLAF   71 (336)
T ss_pred             EccCCHHHHHHHHHHhhCCCCceEEEEEECc-ccCCCeec----------cCC---cceEEeeCChH-H-hc--CCCEEE
Confidence            599999999999999987654   3344333 22121121          122   12333333221 2 45  899999


Q ss_pred             EcCCCCcccHHHHHHhCC-CCCcEEEEeeceee
Q 021331           78 DINGREADEVEPILDALP-NLEQFIYCSSAGVY  109 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss~~v~  109 (314)
                      .+.+.  .....++..+. ...++|=.|++.-+
T Consensus        72 la~p~--~~s~~~v~~~~~~G~~VIDlS~~fR~  102 (336)
T PRK05671         72 FAAGA--AVSRSFAEKARAAGCSVIDLSGALPS  102 (336)
T ss_pred             EcCCH--HHHHHHHHHHHHCCCeEEECchhhcC
Confidence            98874  33444666553 33467777776543

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=95.07  E-value=0.033  Score=41.79  Aligned_cols=67  Identities=13%  Similarity=0.052  Sum_probs=43.7

Q ss_pred             cccccHHHHHHHHHHCCCe-EEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |+|.+|+.++..|.+.|.. |+++.|+.++.....         +...+..+-..++   +++.+.+.  ++|+||++.+
T Consensus        19 GaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~---------~~~~~~~~~~~~~---~~~~~~~~--~~DivI~aT~   84 (135)
T PF01488_consen   19 GAGGAARAVAAALAALGAKEITIVNRTPERAEALA---------EEFGGVNIEAIPL---EDLEEALQ--EADIVINATP   84 (135)
T ss_dssp             SSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHH---------HHHTGCSEEEEEG---GGHCHHHH--TESEEEE-SS
T ss_pred             CCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHH---------HHcCccccceeeH---HHHHHHHh--hCCeEEEecC
Confidence            4599999999999999965 999999876632111         1112222233344   33456777  8999999976


Q ss_pred             CC
Q 021331           82 RE   83 (314)
Q Consensus        82 ~~   83 (314)
                      ..
T Consensus        85 ~~   86 (135)
T PF01488_consen   85 SG   86 (135)
T ss_dssp             TT
T ss_pred             CC
Confidence            53

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=95.03  E-value=0.054  Score=45.69  Aligned_cols=63  Identities=17%  Similarity=0.077  Sum_probs=51.5

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      |||-+|+.++-.+.+-|.+|++++|=.....-+..             -..+..|..|.++++..++..+||.||-
T Consensus        19 GSGELGKEvaIe~QRLG~eViAVDrY~~APAmqVA-------------hrs~Vi~MlD~~al~avv~rekPd~IVp   81 (394)
T COG0027          19 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-------------HRSYVIDMLDGDALRAVVEREKPDYIVP   81 (394)
T ss_pred             cCCccchHHHHHHHhcCCEEEEecCcCCChhhhhh-------------hheeeeeccCHHHHHHHHHhhCCCeeee
Confidence            68999999999999999999999997655332222             2234579999999999999999999984

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.02  E-value=0.25  Score=43.36  Aligned_cols=105  Identities=21%  Similarity=0.275  Sum_probs=64.2

Q ss_pred             cccccHHHHHHHHHHCCC-eEEEEEcCCccc---ccCCC-CC--C----------chhhhhccCc--eEEEEecCCChhh
Q 021331            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI---AQQLP-GE--S----------DQEFAEFSSK--ILHLKGDRKDYDF   63 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~~~-~~--~----------~~~~~~~~~~--~~~~~~D~~d~~~   63 (314)
                      |.|.+|+.+++.|...|. ++++++.+.-..   ..+.- ..  .          .+.+.+..+.  +..+..++ +++.
T Consensus        31 G~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~~~-~~~~  109 (339)
T PRK07688         31 GAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQDV-TAEE  109 (339)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEeccC-CHHH
Confidence            559999999999999996 899999874221   11110 00  0          0122222233  34444455 4455


Q ss_pred             HHHhhhcCCccEEEEcCCCCcccHHHHHHhCC-CCCcEEEEeeceeecc
Q 021331           64 VKSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK  111 (314)
Q Consensus        64 l~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~  111 (314)
                      +.++++  +.|+||.+... ...-..+-+.|. ....+|+.++.+.+|.
T Consensus       110 ~~~~~~--~~DlVid~~Dn-~~~r~~ln~~~~~~~iP~i~~~~~g~~G~  155 (339)
T PRK07688        110 LEELVT--GVDLIIDATDN-FETRFIVNDAAQKYGIPWIYGACVGSYGL  155 (339)
T ss_pred             HHHHHc--CCCEEEEcCCC-HHHHHHHHHHHHHhCCCEEEEeeeeeeeE
Confidence            777787  89999998663 333334555555 4468898888777663

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.01  E-value=0.087  Score=39.86  Aligned_cols=101  Identities=17%  Similarity=0.197  Sum_probs=56.7

Q ss_pred             cccccHHHHHHHHHHCCC-eEEEEEcCCcccc---cCC-C--CC--------CchhhhhccCceEEE--EecCCChhhHH
Q 021331            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIA---QQL-P--GE--------SDQEFAEFSSKILHL--KGDRKDYDFVK   65 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---~~~-~--~~--------~~~~~~~~~~~~~~~--~~D~~d~~~l~   65 (314)
                      |.|.+|..+++.|...|. ++++++.+.-...   .+. .  ..        ..+.+.+..+.+++.  ..++.+ +...
T Consensus         6 G~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~-~~~~   84 (143)
T cd01483           6 GLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE-DNLD   84 (143)
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh-hhHH
Confidence            459999999999999996 7888886642211   111 0  00        012222223344333  333322 2235


Q ss_pred             HhhhcCCccEEEEcCCCCcccHHHHHHhCC-CCCcEEEEeece
Q 021331           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAG  107 (314)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss~~  107 (314)
                      +.++  ++|+||.+... ......+.+.|+ ....+|..++.+
T Consensus        85 ~~~~--~~diVi~~~d~-~~~~~~l~~~~~~~~i~~i~~~~~g  124 (143)
T cd01483          85 DFLD--GVDLVIDAIDN-IAVRRALNRACKELGIPVIDAGGLG  124 (143)
T ss_pred             HHhc--CCCEEEECCCC-HHHHHHHHHHHHHcCCCEEEEcCCC
Confidence            5566  78888887765 334445666666 445666666544

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.00  E-value=0.043  Score=40.49  Aligned_cols=87  Identities=17%  Similarity=0.167  Sum_probs=48.9

Q ss_pred             CCcccccHHHHHHHHHH-CCCeEEEE-EcCCcccc-cCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVK-EGHQVTLF-TRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~-~g~~V~~~-~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      .|++|.+|+.+++.+.+ .++++.+. +|+.+... +...     .+    .+..  ...+.-.+++++++.  .+|++|
T Consensus         6 ~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g-----~~----~~~~--~~~~~v~~~l~~~~~--~~DVvI   72 (124)
T PF01113_consen    6 VGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVG-----EL----AGIG--PLGVPVTDDLEELLE--EADVVI   72 (124)
T ss_dssp             ETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCH-----HH----CTSS--T-SSBEBS-HHHHTT--H-SEEE
T ss_pred             ECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhh-----hh----hCcC--CcccccchhHHHhcc--cCCEEE
Confidence            48889999999999999 47887765 45552211 0000     00    0000  111112356788888  599999


Q ss_pred             EcCCCCcccHHHHHHhCC-CCCcEEE
Q 021331           78 DINGREADEVEPILDALP-NLEQFIY  102 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~-~~~~~i~  102 (314)
                      ++.  .+..+...++.+. ...++|.
T Consensus        73 DfT--~p~~~~~~~~~~~~~g~~~Vi   96 (124)
T PF01113_consen   73 DFT--NPDAVYDNLEYALKHGVPLVI   96 (124)
T ss_dssp             EES---HHHHHHHHHHHHHHT-EEEE
T ss_pred             EcC--ChHHhHHHHHHHHhCCCCEEE
Confidence            998  4555555666655 4345553

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.96  E-value=0.15  Score=44.14  Aligned_cols=79  Identities=14%  Similarity=0.239  Sum_probs=53.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|.+|++.+|.....                .++..+    ....++.+++.  ++|+|+.+...
T Consensus       143 G~G~IG~~vA~~l~afG~~V~~~~~~~~~~----------------~~~~~~----~~~~~l~e~l~--~aDvvv~~lPl  200 (312)
T PRK15469        143 GAGVLGSKVAQSLQTWGFPLRCWSRSRKSW----------------PGVQSF----AGREELSAFLS--QTRVLINLLPN  200 (312)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCCCCC----------------CCceee----cccccHHHHHh--cCCEEEECCCC
Confidence            679999999999999999999998865431                111111    13456889998  99999987765


Q ss_pred             CcccHHH-----HHHhCCCCCcEEEEe
Q 021331           83 EADEVEP-----ILDALPNLEQFIYCS  104 (314)
Q Consensus        83 ~~~~~~~-----~~~~~~~~~~~i~~S  104 (314)
                      +.. ++.     .++.|+....||.++
T Consensus       201 t~~-T~~li~~~~l~~mk~ga~lIN~a  226 (312)
T PRK15469        201 TPE-TVGIINQQLLEQLPDGAYLLNLA  226 (312)
T ss_pred             CHH-HHHHhHHHHHhcCCCCcEEEECC
Confidence            432 333     444565445555544

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=94.94  E-value=0.28  Score=39.46  Aligned_cols=89  Identities=13%  Similarity=0.168  Sum_probs=52.9

Q ss_pred             cccccHHHHHHHHHHCCC-eEEEEEcC---CcccccCCCCC--C--------chhhhhccC--ceEEEEecCCChhhHHH
Q 021331            3 GTRFIGVFLSRLLVKEGH-QVTLFTRG---KAPIAQQLPGE--S--------DQEFAEFSS--KILHLKGDRKDYDFVKS   66 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~~~~~~~--~--------~~~~~~~~~--~~~~~~~D~~d~~~l~~   66 (314)
                      |.|.+|+.++..|...|. ++++++.+   .++..+.....  .        .+.+....+  .+..+..++ +.+.+.+
T Consensus        28 G~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~i-~~~~~~~  106 (200)
T TIGR02354        28 GLGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEKI-TEENIDK  106 (200)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeeeC-CHhHHHH
Confidence            458999999999999997 79999988   44443322110  0        012222223  233444455 4566778


Q ss_pred             hhhcCCccEEEEcCCCCcccHHHHHHhCC
Q 021331           67 SLSAKGFDVVYDINGREADEVEPILDALP   95 (314)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~   95 (314)
                      +++  ++|+||.+. .+...-..+.+.+.
T Consensus       107 ~~~--~~DlVi~a~-Dn~~~k~~l~~~~~  132 (200)
T TIGR02354       107 FFK--DADIVCEAF-DNAEAKAMLVNAVL  132 (200)
T ss_pred             Hhc--CCCEEEECC-CCHHHHHHHHHHHH
Confidence            887  899999993 33332233344443

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=94.90  E-value=0.19  Score=40.57  Aligned_cols=105  Identities=16%  Similarity=0.118  Sum_probs=61.2

Q ss_pred             cccccHHHHHHHHHHCCC-eEEEEEcCCcc---cccCCC-C-----C-----CchhhhhccCceEEEEecC-CChhhHHH
Q 021331            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAP---IAQQLP-G-----E-----SDQEFAEFSSKILHLKGDR-KDYDFVKS   66 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~~~~~-~-----~-----~~~~~~~~~~~~~~~~~D~-~d~~~l~~   66 (314)
                      |.|.+|+.+++.|...|. ++++++.+.-.   ..++.. .     .     ..+++.+..+.+++...+- .+++.+.+
T Consensus        28 G~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i~~~~~~~  107 (202)
T TIGR02356        28 GAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKERVTAENLEL  107 (202)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhcCCHHHHHH
Confidence            579999999999999995 89998877422   111110 0     0     0022333334444433321 24456677


Q ss_pred             hhhcCCccEEEEcCCCCcccHHHHHHhCC-CCCcEEEEeeceeec
Q 021331           67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (314)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss~~v~~  110 (314)
                      .++  ++|+||.+... ...-..+-+.|. ....+|+.++.+.+|
T Consensus       108 ~~~--~~D~Vi~~~d~-~~~r~~l~~~~~~~~ip~i~~~~~g~~G  149 (202)
T TIGR02356       108 LIN--NVDLVLDCTDN-FATRYLINDACVALGTPLISAAVVGFGG  149 (202)
T ss_pred             HHh--CCCEEEECCCC-HHHHHHHHHHHHHcCCCEEEEEeccCeE
Confidence            777  89999988653 333333445555 445788877655554

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=94.90  E-value=0.053  Score=47.72  Aligned_cols=96  Identities=16%  Similarity=0.123  Sum_probs=53.0

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEE-EcCCcccccCCCCCCchhhhhccCceEEE-EecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      +||||++|..+++.|.+. +.+++.+ +++.+. .+.+.        +..+.+... ..++.+. +..++++  ++|+||
T Consensus         6 iGATG~vG~ellr~L~~hP~~el~~l~~s~~sa-gk~~~--------~~~~~l~~~~~~~~~~~-~~~~~~~--~~DvVf   73 (346)
T TIGR01850         6 VGASGYTGGELLRLLLNHPEVEITYLVSSRESA-GKPVS--------EVHPHLRGLVDLNLEPI-DEEEIAE--DADVVF   73 (346)
T ss_pred             ECCCCHHHHHHHHHHHcCCCceEEEEeccchhc-CCChH--------HhCccccccCCceeecC-CHHHhhc--CCCEEE
Confidence            499999999999999987 4688854 443322 11111        001111111 1112211 2234444  799999


Q ss_pred             EcCCCCcccHHHHHHhC-CCCCcEEEEeeceeec
Q 021331           78 DINGREADEVEPILDAL-PNLEQFIYCSSAGVYL  110 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~-~~~~~~i~~Ss~~v~~  110 (314)
                      .+.+..  ....++..+ ...+++|=.|++.-+.
T Consensus        74 ~alP~~--~s~~~~~~~~~~G~~VIDlS~~fR~~  105 (346)
T TIGR01850        74 LALPHG--VSAELAPELLAAGVKVIDLSADFRLK  105 (346)
T ss_pred             ECCCch--HHHHHHHHHHhCCCEEEeCChhhhcC
Confidence            887643  233444444 3446888888866543

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=94.87  E-value=0.1  Score=47.85  Aligned_cols=70  Identities=27%  Similarity=0.368  Sum_probs=52.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|..+++.|.+.|++|++++++++......         +...++.++.+|.++++.+.++- -.++|.||-+...
T Consensus       238 G~G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~---------~~~~~~~~i~gd~~~~~~L~~~~-~~~a~~vi~~~~~  307 (453)
T PRK09496        238 GGGNIGYYLAKLLEKEGYSVKLIERDPERAEELA---------EELPNTLVLHGDGTDQELLEEEG-IDEADAFIALTND  307 (453)
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH---------HHCCCCeEEECCCCCHHHHHhcC-CccCCEEEECCCC
Confidence            4599999999999999999999998876532111         11246788999999998886643 2378988866553

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=94.86  E-value=0.015  Score=42.73  Aligned_cols=30  Identities=23%  Similarity=0.420  Sum_probs=22.9

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCc
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKA   30 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~   30 (314)
                      +||||++|..+++.|.+.. ++++.+..+..
T Consensus         5 vGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~   35 (121)
T PF01118_consen    5 VGATGYVGRELLRLLAEHPDFELVALVSSSR   35 (121)
T ss_dssp             ESTTSHHHHHHHHHHHHTSTEEEEEEEESTT
T ss_pred             ECCCCHHHHHHHHHHhcCCCccEEEeeeecc
Confidence            4999999999999999974 56555544433

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>TIGR00518 alaDH alanine dehydrogenase

Probab=94.78  E-value=0.1  Score=46.39  Aligned_cols=90  Identities=8%  Similarity=0.016  Sum_probs=60.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |+|-+|..+++.|...|.+|++++|+.........         ....  .+..+..+++.+.+.+.  ++|+||++++.
T Consensus       174 GaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~---------~~g~--~v~~~~~~~~~l~~~l~--~aDvVI~a~~~  240 (370)
T TIGR00518       174 GGGVVGTNAAKMANGLGATVTILDINIDRLRQLDA---------EFGG--RIHTRYSNAYEIEDAVK--RADLLIGAVLI  240 (370)
T ss_pred             cCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH---------hcCc--eeEeccCCHHHHHHHHc--cCCEEEEcccc
Confidence            45999999999999999999999988654221100         0011  12345567778888888  89999998743


Q ss_pred             C----c-ccHHHHHHhCCCCCcEEEEee
Q 021331           83 E----A-DEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        83 ~----~-~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      .    . .-+...++.++....+|-++.
T Consensus       241 ~g~~~p~lit~~~l~~mk~g~vIvDva~  268 (370)
T TIGR00518       241 PGAKAPKLVSNSLVAQMKPGAVIVDVAI  268 (370)
T ss_pred             CCCCCCcCcCHHHHhcCCCCCEEEEEec
Confidence            1    1 124667777775556676664

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=94.61  E-value=0.063  Score=46.12  Aligned_cols=84  Identities=19%  Similarity=0.235  Sum_probs=54.4

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|..++..|...|.+|++++|++..... ..          ..+..++     ..+.+.+.+.  ++|+||++.+.
T Consensus       159 G~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~-~~----------~~G~~~~-----~~~~l~~~l~--~aDiVI~t~p~  220 (296)
T PRK08306        159 GFGRTGMTLARTLKALGANVTVGARKSAHLAR-IT----------EMGLSPF-----HLSELAEEVG--KIDIIFNTIPA  220 (296)
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH----------HcCCeee-----cHHHHHHHhC--CCCEEEECCCh
Confidence            35889999999999999999999998654221 10          0223222     2345667777  89999998753


Q ss_pred             CcccHHHHHHhCCCCCcEEEEee
Q 021331           83 EADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      . .-....++.++....+|-+++
T Consensus       221 ~-~i~~~~l~~~~~g~vIIDla~  242 (296)
T PRK08306        221 L-VLTKEVLSKMPPEALIIDLAS  242 (296)
T ss_pred             h-hhhHHHHHcCCCCcEEEEEcc
Confidence            2 224455666665445554544

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=94.50  E-value=0.087  Score=46.15  Aligned_cols=91  Identities=13%  Similarity=0.156  Sum_probs=57.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh----hhHHHhhhcCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY----DFVKSSLSAKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~----~~l~~~~~~~~~d~v   76 (314)
                      +||+|.+|..+++.+...|.+|++++++.++.....         + ..++..+ .|..+.    +.+.+... .++|++
T Consensus       158 ~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~---------~-~lGa~~v-i~~~~~~~~~~~i~~~~~-~gvd~v  225 (338)
T cd08295         158 SAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLK---------N-KLGFDDA-FNYKEEPDLDAALKRYFP-NGIDIY  225 (338)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---------H-hcCCcee-EEcCCcccHHHHHHHhCC-CCcEEE
Confidence            488999999999999999999999888765532110         0 0112111 233222    22233322 379999


Q ss_pred             EEcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        77 i~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +++.|.  ......++.++...+++.++.
T Consensus       226 ~d~~g~--~~~~~~~~~l~~~G~iv~~G~  252 (338)
T cd08295         226 FDNVGG--KMLDAVLLNMNLHGRIAACGM  252 (338)
T ss_pred             EECCCH--HHHHHHHHHhccCcEEEEecc
Confidence            999874  345567777776668887664

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=94.48  E-value=0.068  Score=48.29  Aligned_cols=30  Identities=30%  Similarity=0.501  Sum_probs=27.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~   32 (314)
                      |.|++|..++..|.+.||+|++.++++...
T Consensus         7 GlG~~G~~lA~~La~~G~~V~~~d~~~~~v   36 (411)
T TIGR03026         7 GLGYVGLPLAALLADLGHEVTGVDIDQEKV   36 (411)
T ss_pred             CCCchhHHHHHHHHhcCCeEEEEECCHHHH
Confidence            579999999999999999999999987664

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=94.47  E-value=0.19  Score=44.82  Aligned_cols=66  Identities=15%  Similarity=0.035  Sum_probs=50.6

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |+|.+|..+++.+.+.|++|++++.++......+.             -..+..|..|++.+.++.++.++|.|+....
T Consensus         6 G~g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~a-------------d~~~~~~~~d~~~l~~~~~~~~id~v~~~~e   71 (380)
T TIGR01142         6 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-------------HRSYVINMLDGDALRAVIEREKPDYIVPEIE   71 (380)
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchhhhC-------------ceEEEcCCCCHHHHHHHHHHhCCCEEEeccC
Confidence            35999999999999999999999987654222121             1345678889999999988778999986543

This enzyme is an alternative to PurN (TIGR00639)

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=94.44  E-value=0.44  Score=39.56  Aligned_cols=104  Identities=13%  Similarity=0.122  Sum_probs=58.6

Q ss_pred             cccccHHHHHHHHHHCC-CeEEEEEcCCcccc---cCCCC---CC--------chhhhhccCceEEEEecC-CChhhHHH
Q 021331            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIA---QQLPG---ES--------DQEFAEFSSKILHLKGDR-KDYDFVKS   66 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~---~~~~~---~~--------~~~~~~~~~~~~~~~~D~-~d~~~l~~   66 (314)
                      |.|.+|+.+++.|...| -++++++.+.-...   ++.-.   ..        .+++.+..+.+++...+- .+.+.+.+
T Consensus        31 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i~~~~~~~  110 (240)
T TIGR02355        31 GLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKLDDAELAA  110 (240)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccCCHHHHHH
Confidence            56999999999999998 57888887654321   11100   00        022222334444433322 24455667


Q ss_pred             hhhcCCccEEEEcCCCCcccHHHHHHhCC-CCCcEEEEeeceee
Q 021331           67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVY  109 (314)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss~~v~  109 (314)
                      +++  ++|+||.+... ......+-+.|. ....+|+.++.+.+
T Consensus       111 ~~~--~~DlVvd~~D~-~~~r~~ln~~~~~~~ip~v~~~~~g~~  151 (240)
T TIGR02355       111 LIA--EHDIVVDCTDN-VEVRNQLNRQCFAAKVPLVSGAAIRME  151 (240)
T ss_pred             Hhh--cCCEEEEcCCC-HHHHHHHHHHHHHcCCCEEEEEecccE
Confidence            777  78888887754 222233445555 44577776554443

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=94.37  E-value=0.33  Score=36.31  Aligned_cols=104  Identities=17%  Similarity=0.219  Sum_probs=62.7

Q ss_pred             cccccHHHHHHHHHHCCC-eEEEEEcCCccc---ccCCC-CC-----C-----chhhhhccCce--EEEEecCCChhhHH
Q 021331            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI---AQQLP-GE-----S-----DQEFAEFSSKI--LHLKGDRKDYDFVK   65 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~~~-~~-----~-----~~~~~~~~~~~--~~~~~D~~d~~~l~   65 (314)
                      |.|.+|+.+++.|...|. ++++++...-..   ..+.- ..     .     ...+.+..+.+  ..+..++ +.+.+.
T Consensus         9 G~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~-~~~~~~   87 (135)
T PF00899_consen    9 GAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI-DEENIE   87 (135)
T ss_dssp             STSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC-SHHHHH
T ss_pred             CcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc-cccccc
Confidence            579999999999999995 788888765331   11111 00     0     02233333333  4444455 556677


Q ss_pred             HhhhcCCccEEEEcCCCCcccHHHHHHhCC-CCCcEEEEeeceeec
Q 021331           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (314)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss~~v~~  110 (314)
                      +.++  ++|+||.+... ......+.+.|. ...++|+.++.+.+|
T Consensus        88 ~~~~--~~d~vi~~~d~-~~~~~~l~~~~~~~~~p~i~~~~~g~~G  130 (135)
T PF00899_consen   88 ELLK--DYDIVIDCVDS-LAARLLLNEICREYGIPFIDAGVNGFYG  130 (135)
T ss_dssp             HHHH--TSSEEEEESSS-HHHHHHHHHHHHHTT-EEEEEEEETTEE
T ss_pred             cccc--CCCEEEEecCC-HHHHHHHHHHHHHcCCCEEEEEeecCEE
Confidence            8887  89999988764 333344555666 555788777655444

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=94.29  E-value=0.13  Score=40.49  Aligned_cols=103  Identities=15%  Similarity=0.185  Sum_probs=59.8

Q ss_pred             cccccHHHHHHHHHHCCC-eEEEEEcCC---cccccCCCC--C--------CchhhhhccCceEE--EEecCCChhhHHH
Q 021331            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGK---APIAQQLPG--E--------SDQEFAEFSSKILH--LKGDRKDYDFVKS   66 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~~~r~~---~~~~~~~~~--~--------~~~~~~~~~~~~~~--~~~D~~d~~~l~~   66 (314)
                      |.|.+|+.+++.|...|. ++++++.+.   ++..++...  .        ..+++.+..+.+++  +...+ +.+.+.+
T Consensus         6 G~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~-~~~~~~~   84 (174)
T cd01487           6 GAGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKI-DENNLEG   84 (174)
T ss_pred             CcCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeec-ChhhHHH
Confidence            469999999999999996 699998875   332222210  0        01223333333443  33344 3455777


Q ss_pred             hhhcCCccEEEEcCCCCcccHHHHHHhCC-C-CCcEEEEeeceee
Q 021331           67 SLSAKGFDVVYDINGREADEVEPILDALP-N-LEQFIYCSSAGVY  109 (314)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~-~-~~~~i~~Ss~~v~  109 (314)
                      .++  ++|+||.+.. +...-..+.+.+. . ...+|+.+..+.|
T Consensus        85 ~l~--~~DlVi~~~d-~~~~r~~i~~~~~~~~~ip~i~~~~~~~~  126 (174)
T cd01487          85 LFG--DCDIVVEAFD-NAETKAMLAESLLGNKNKPVVCASGMAGF  126 (174)
T ss_pred             Hhc--CCCEEEECCC-CHHHHHHHHHHHHHHCCCCEEEEehhhcc
Confidence            888  8999999844 3333334555554 3 4567765544333

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.24  E-value=0.058  Score=49.39  Aligned_cols=69  Identities=23%  Similarity=0.282  Sum_probs=46.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      +|+++ +|..+++.|++.|++|++.+++........    ..++.  ..++.++.+|..+     +...  ++|+||+++
T Consensus        11 iG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~----~~~l~--~~~~~~~~~~~~~-----~~~~--~~d~vv~~~   76 (450)
T PRK14106         11 VGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEA----LEELG--ELGIELVLGEYPE-----EFLE--GVDLVVVSP   76 (450)
T ss_pred             ECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHH----HHHHH--hcCCEEEeCCcch-----hHhh--cCCEEEECC
Confidence            47655 999999999999999999998753211000    00111  1357777777765     2344  799999998


Q ss_pred             CCC
Q 021331           81 GRE   83 (314)
Q Consensus        81 ~~~   83 (314)
                      +..
T Consensus        77 g~~   79 (450)
T PRK14106         77 GVP   79 (450)
T ss_pred             CCC
Confidence            864

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.23  E-value=0.093  Score=38.76  Aligned_cols=27  Identities=33%  Similarity=0.517  Sum_probs=23.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEE-cCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFT-RGK   29 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~-r~~   29 (314)
                      |+|.+|.+|++.|.+.||+|.++. |+.
T Consensus        17 GaGrVG~~La~aL~~ag~~v~~v~srs~   44 (127)
T PF10727_consen   17 GAGRVGTALARALARAGHEVVGVYSRSP   44 (127)
T ss_dssp             CTSCCCCHHHHHHHHTTSEEEEESSCHH
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEEeCCc
Confidence            459999999999999999999875 443

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=94.20  E-value=0.38  Score=39.61  Aligned_cols=104  Identities=15%  Similarity=0.170  Sum_probs=59.3

Q ss_pred             cccccHHHHHHHHHHCC-CeEEEEEcCCcc---cccCCCC-C----------CchhhhhccCce--EEEEecCCChhhHH
Q 021331            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAP---IAQQLPG-E----------SDQEFAEFSSKI--LHLKGDRKDYDFVK   65 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~~---~~~~~~~-~----------~~~~~~~~~~~~--~~~~~D~~d~~~l~   65 (314)
                      |.|.+|+++++.|...| .++++++.+.-.   ..++.-. .          ..+++....+.+  +.+..++ +.+.+.
T Consensus        28 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i-~~~~~~  106 (228)
T cd00757          28 GAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNERL-DAENAE  106 (228)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEeccee-CHHHHH
Confidence            57999999999999999 478887765422   1111100 0          002222222333  3333344 345667


Q ss_pred             HhhhcCCccEEEEcCCCCcccHHHHHHhCC-CCCcEEEEeeceeec
Q 021331           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (314)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss~~v~~  110 (314)
                      ++++  ++|+||.+... ...-..+-+.|. ....+|+.+..+.+|
T Consensus       107 ~~~~--~~DvVi~~~d~-~~~r~~l~~~~~~~~ip~i~~g~~g~~g  149 (228)
T cd00757         107 ELIA--GYDLVLDCTDN-FATRYLINDACVKLGKPLVSGAVLGFEG  149 (228)
T ss_pred             HHHh--CCCEEEEcCCC-HHHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            7777  89999988763 333334445555 445778776554443

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=94.18  E-value=0.24  Score=43.11  Aligned_cols=92  Identities=14%  Similarity=0.238  Sum_probs=57.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhh---hcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL---SAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~---~~~~~d~vi   77 (314)
                      +||+|.+|..+++.+...|.+|++++++.++... +.        +  .++.. ..|..+.+.+.+.+   ...++|+++
T Consensus       145 ~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~-~~--------~--lGa~~-vi~~~~~~~~~~~~~~~~~~gvdvv~  212 (325)
T TIGR02825       145 NAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAY-LK--------K--LGFDV-AFNYKTVKSLEETLKKASPDGYDCYF  212 (325)
T ss_pred             eCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH--------H--cCCCE-EEeccccccHHHHHHHhCCCCeEEEE
Confidence            4889999999999998899999998887655321 11        0  12221 12333322222222   223699999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEeec
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      ++.|.  ......++.++...+++.++..
T Consensus       213 d~~G~--~~~~~~~~~l~~~G~iv~~G~~  239 (325)
T TIGR02825       213 DNVGG--EFSNTVIGQMKKFGRIAICGAI  239 (325)
T ss_pred             ECCCH--HHHHHHHHHhCcCcEEEEecch
Confidence            99874  2346677777766788877653

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.16  E-value=0.14  Score=46.01  Aligned_cols=82  Identities=11%  Similarity=0.017  Sum_probs=53.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|..+++.|...|.+|+++++++.......           ..++.+.     +   +.++++  ++|+||.+.|.
T Consensus       219 G~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-----------~~G~~v~-----~---l~eal~--~aDVVI~aTG~  277 (425)
T PRK05476        219 GYGDVGKGCAQRLRGLGARVIVTEVDPICALQAA-----------MDGFRVM-----T---MEEAAE--LGDIFVTATGN  277 (425)
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-----------hcCCEec-----C---HHHHHh--CCCEEEECCCC
Confidence            4699999999999999999999998875522111           1222211     2   456666  89999998765


Q ss_pred             CcccHHHHHHhCCCCCcEEEEee
Q 021331           83 EADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ...-....++.++....++.++.
T Consensus       278 ~~vI~~~~~~~mK~GailiNvG~  300 (425)
T PRK05476        278 KDVITAEHMEAMKDGAILANIGH  300 (425)
T ss_pred             HHHHHHHHHhcCCCCCEEEEcCC
Confidence            33223345666665556665543

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=94.07  E-value=0.21  Score=43.40  Aligned_cols=92  Identities=17%  Similarity=0.259  Sum_probs=58.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChh---hHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~l~~~~~~~~~d~vi   77 (314)
                      +||+|.+|..+++.+...|.+|++++++.++... +.        +  .++..+ .|..+++   .+..... .++|+++
T Consensus       150 ~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~-l~--------~--~Ga~~v-i~~~~~~~~~~v~~~~~-~gvd~vl  216 (329)
T cd08294         150 NGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAW-LK--------E--LGFDAV-FNYKTVSLEEALKEAAP-DGIDCYF  216 (329)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH--------H--cCCCEE-EeCCCccHHHHHHHHCC-CCcEEEE
Confidence            4889999999999999999999999887765321 11        1  122221 2443332   2322222 3699999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEeece
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~~  107 (314)
                      ++.|.  ......++.++...+++.+++..
T Consensus       217 d~~g~--~~~~~~~~~l~~~G~iv~~g~~~  244 (329)
T cd08294         217 DNVGG--EFSSTVLSHMNDFGRVAVCGSIS  244 (329)
T ss_pred             ECCCH--HHHHHHHHhhccCCEEEEEcchh
Confidence            99874  34456667777556888776543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=94.07  E-value=0.38  Score=39.11  Aligned_cols=104  Identities=13%  Similarity=0.182  Sum_probs=59.8

Q ss_pred             cccccHHHHHHHHHHCCC-eEEEEEcCC---cccccCCC--CCC--------chhhhhccCceE--EEEecCCChhhHHH
Q 021331            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGK---APIAQQLP--GES--------DQEFAEFSSKIL--HLKGDRKDYDFVKS   66 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~~~r~~---~~~~~~~~--~~~--------~~~~~~~~~~~~--~~~~D~~d~~~l~~   66 (314)
                      |.|.+|+.+++.|...|. ++++++.+.   ++..++.-  ...        .+++....+.++  .+...+ +.+.+.+
T Consensus        35 G~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i-~~~~~~~  113 (212)
T PRK08644         35 GAGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKI-DEDNIEE  113 (212)
T ss_pred             CcCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeec-CHHHHHH
Confidence            569999999999999994 688888773   22221110  000        012222223333  333344 3455667


Q ss_pred             hhhcCCccEEEEcCCCCcccHHHHHHhCC-C-CCcEEEEeeceeec
Q 021331           67 SLSAKGFDVVYDINGREADEVEPILDALP-N-LEQFIYCSSAGVYL  110 (314)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~-~-~~~~i~~Ss~~v~~  110 (314)
                      .++  ++|+||.+.. +...-..+.+.|. . ...+|+.+..+.|+
T Consensus       114 ~~~--~~DvVI~a~D-~~~~r~~l~~~~~~~~~~p~I~~~~~~~~~  156 (212)
T PRK08644        114 LFK--DCDIVVEAFD-NAETKAMLVETVLEHPGKKLVAASGMAGYG  156 (212)
T ss_pred             HHc--CCCEEEECCC-CHHHHHHHHHHHHHhCCCCEEEeehhhccC
Confidence            777  8999998854 3333344555555 4 56778766544443

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=94.05  E-value=0.15  Score=43.13  Aligned_cols=99  Identities=16%  Similarity=0.180  Sum_probs=66.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC---CccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~---~~d~vi   77 (314)
                      .||+|-+|+-+.+-..-+|++|+++.-+.++.......          .++. ...|+.++ ++.+.+++.   ++|+.|
T Consensus       157 SaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~----------lGfD-~~idyk~~-d~~~~L~~a~P~GIDvyf  224 (340)
T COG2130         157 SAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEE----------LGFD-AGIDYKAE-DFAQALKEACPKGIDVYF  224 (340)
T ss_pred             EecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHh----------cCCc-eeeecCcc-cHHHHHHHHCCCCeEEEE
Confidence            47899999998888888899999999988875322110          1111 12466555 344444432   789999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEeeceeeccCC
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSSAGVYLKSD  113 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~~v~~~~~  113 (314)
                      .+.|-.+.  ..++..+..-.|++.++-.+.|+.++
T Consensus       225 eNVGg~v~--DAv~~~ln~~aRi~~CG~IS~YN~~~  258 (340)
T COG2130         225 ENVGGEVL--DAVLPLLNLFARIPVCGAISQYNAPE  258 (340)
T ss_pred             EcCCchHH--HHHHHhhccccceeeeeehhhcCCCC
Confidence            88775332  34555566567999999988997663

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=94.02  E-value=0.059  Score=51.18  Aligned_cols=80  Identities=14%  Similarity=0.221  Sum_probs=57.6

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|-+|+.+++.|.++|+++++++.+++..... .          ..+..++.+|.++++.++++= -.++|.+|-+.+.
T Consensus       407 G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~-~----------~~g~~v~~GDat~~~~L~~ag-i~~A~~vv~~~~d  474 (601)
T PRK03659        407 GFGRFGQVIGRLLMANKMRITVLERDISAVNLM-R----------KYGYKVYYGDATQLELLRAAG-AEKAEAIVITCNE  474 (601)
T ss_pred             cCchHHHHHHHHHHhCCCCEEEEECCHHHHHHH-H----------hCCCeEEEeeCCCHHHHHhcC-CccCCEEEEEeCC
Confidence            569999999999999999999999987764321 1          157889999999999888752 2378888866554


Q ss_pred             CcccHHHHHHhCC
Q 021331           83 EADEVEPILDALP   95 (314)
Q Consensus        83 ~~~~~~~~~~~~~   95 (314)
                      . .....++..++
T Consensus       475 ~-~~n~~i~~~~r  486 (601)
T PRK03659        475 P-EDTMKIVELCQ  486 (601)
T ss_pred             H-HHHHHHHHHHH
Confidence            2 33333444443

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=94.02  E-value=0.17  Score=45.43  Aligned_cols=81  Identities=10%  Similarity=0.019  Sum_probs=54.8

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|..+++.+...|.+|+++++++.+......           .++..+     +   +.+++.  ++|+||.+.|.
T Consensus       209 G~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~-----------~G~~~~-----~---~~e~v~--~aDVVI~atG~  267 (413)
T cd00401         209 GYGDVGKGCAQSLRGQGARVIVTEVDPICALQAAM-----------EGYEVM-----T---MEEAVK--EGDIFVTTTGN  267 (413)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHh-----------cCCEEc-----c---HHHHHc--CCCEEEECCCC
Confidence            56999999999999999999998887655321111           233222     1   234555  78999999885


Q ss_pred             CcccHHHHHHhCCCCCcEEEEe
Q 021331           83 EADEVEPILDALPNLEQFIYCS  104 (314)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~i~~S  104 (314)
                      ...-....++.++....++.++
T Consensus       268 ~~~i~~~~l~~mk~GgilvnvG  289 (413)
T cd00401         268 KDIITGEHFEQMKDGAIVCNIG  289 (413)
T ss_pred             HHHHHHHHHhcCCCCcEEEEeC
Confidence            4433444577777666777766

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PLN02494 adenosylhomocysteinase

Probab=94.00  E-value=0.2  Score=45.51  Aligned_cols=82  Identities=13%  Similarity=0.043  Sum_probs=56.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|+.+++.+...|.+|+++.+++........           .++.++        .+.+++.  ..|+||.+.+.
T Consensus       261 GyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~-----------~G~~vv--------~leEal~--~ADVVI~tTGt  319 (477)
T PLN02494        261 GYGDVGKGCAAAMKAAGARVIVTEIDPICALQALM-----------EGYQVL--------TLEDVVS--EADIFVTTTGN  319 (477)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHh-----------cCCeec--------cHHHHHh--hCCEEEECCCC
Confidence            56999999999999999999999887654221111           223321        2455666  79999987775


Q ss_pred             CcccHHHHHHhCCCCCcEEEEee
Q 021331           83 EADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ...-....++.|+....++.++.
T Consensus       320 ~~vI~~e~L~~MK~GAiLiNvGr  342 (477)
T PLN02494        320 KDIIMVDHMRKMKNNAIVCNIGH  342 (477)
T ss_pred             ccchHHHHHhcCCCCCEEEEcCC
Confidence            44434667777886667777654

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=93.94  E-value=0.19  Score=36.85  Aligned_cols=96  Identities=17%  Similarity=0.144  Sum_probs=52.0

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEEEcCCcccccCCCCCCchhhhhccCceE-EEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      +|++|.+|..+++.|.+. ++++.++..++....+...        ...+++. ....++ +.+.+.  ..  ++|+||-
T Consensus         5 iG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~--------~~~~~~~~~~~~~~-~~~~~~--~~--~~DvV~~   71 (122)
T smart00859        5 VGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVS--------EAGPHLKGEVVLEL-EPEDFE--EL--AVDIVFL   71 (122)
T ss_pred             ECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHH--------HHCccccccccccc-ccCChh--hc--CCCEEEE
Confidence            488999999999999985 7888888332221111111        0112221 111122 223333  13  7999998


Q ss_pred             cCCCCcccH--HHHHHhCCCCCcEEEEeeceee
Q 021331           79 INGREADEV--EPILDALPNLEQFIYCSSAGVY  109 (314)
Q Consensus        79 ~a~~~~~~~--~~~~~~~~~~~~~i~~Ss~~v~  109 (314)
                      +.+......  ..+...+...+.+|-+||..-.
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~g~~viD~s~~~~~  104 (122)
T smart00859       72 ALPHGVSKEIAPLLPKAAEAGVKVIDLSSAFRM  104 (122)
T ss_pred             cCCcHHHHHHHHHHHhhhcCCCEEEECCccccC
Confidence            877543221  1233334555677877775443

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PRK06436 glycerate dehydrogenase; Provisional

Probab=93.92  E-value=0.22  Score=42.87  Aligned_cols=81  Identities=19%  Similarity=0.095  Sum_probs=54.4

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|.+|++.+|+...                 .++...      ..++++++.  ++|+|+.+...
T Consensus       129 G~G~IG~~vA~~l~afG~~V~~~~r~~~~-----------------~~~~~~------~~~l~ell~--~aDiv~~~lp~  183 (303)
T PRK06436        129 GYGGIGRRVALLAKAFGMNIYAYTRSYVN-----------------DGISSI------YMEPEDIMK--KSDFVLISLPL  183 (303)
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCCcc-----------------cCcccc------cCCHHHHHh--hCCEEEECCCC
Confidence            57999999999888889999999987432                 111100      124778888  89999987664


Q ss_pred             Ccc----cHHHHHHhCCCCCcEEEEeecee
Q 021331           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (314)
Q Consensus        83 ~~~----~~~~~~~~~~~~~~~i~~Ss~~v  108 (314)
                      +..    -....++.|+....||.+|...+
T Consensus       184 t~~T~~li~~~~l~~mk~ga~lIN~sRG~~  213 (303)
T PRK06436        184 TDETRGMINSKMLSLFRKGLAIINVARADV  213 (303)
T ss_pred             CchhhcCcCHHHHhcCCCCeEEEECCCccc
Confidence            332    12456666776567777666444

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=93.75  E-value=0.28  Score=42.84  Aligned_cols=93  Identities=19%  Similarity=0.201  Sum_probs=57.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh---hhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~l~~~~~~~~~d~vi   77 (314)
                      +||+|.+|...++.+...|+.+++++.+.++.. .+..          .+...+ .|+.+.   +.+.++....++|+|+
T Consensus       149 ~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~----------lGAd~v-i~y~~~~~~~~v~~~t~g~gvDvv~  216 (326)
T COG0604         149 HGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKE----------LGADHV-INYREEDFVEQVRELTGGKGVDVVL  216 (326)
T ss_pred             ecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHh----------cCCCEE-EcCCcccHHHHHHHHcCCCCceEEE
Confidence            589999999999999999977777776665533 2221          122111 234443   3344444434699999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEeece
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~~  107 (314)
                      ++.|..  .....++++....+++.+...+
T Consensus       217 D~vG~~--~~~~~l~~l~~~G~lv~ig~~~  244 (326)
T COG0604         217 DTVGGD--TFAASLAALAPGGRLVSIGALS  244 (326)
T ss_pred             ECCCHH--HHHHHHHHhccCCEEEEEecCC
Confidence            998742  2233566666447888766543

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=93.71  E-value=0.14  Score=37.89  Aligned_cols=87  Identities=20%  Similarity=0.253  Sum_probs=56.5

Q ss_pred             cHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh---hhHHHhhhcCCccEEEEcCCCC
Q 021331            7 IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVYDINGRE   83 (314)
Q Consensus         7 iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~l~~~~~~~~~d~vi~~a~~~   83 (314)
                      +|...++.+...|.+|+++++++.+... +.        +  .+...+ .|..+.   +.+.++....++|+||.+.|. 
T Consensus         2 vG~~a~q~ak~~G~~vi~~~~~~~k~~~-~~--------~--~Ga~~~-~~~~~~~~~~~i~~~~~~~~~d~vid~~g~-   68 (130)
T PF00107_consen    2 VGLMAIQLAKAMGAKVIATDRSEEKLEL-AK--------E--LGADHV-IDYSDDDFVEQIRELTGGRGVDVVIDCVGS-   68 (130)
T ss_dssp             HHHHHHHHHHHTTSEEEEEESSHHHHHH-HH--------H--TTESEE-EETTTSSHHHHHHHHTTTSSEEEEEESSSS-
T ss_pred             hHHHHHHHHHHcCCEEEEEECCHHHHHH-HH--------h--hccccc-ccccccccccccccccccccceEEEEecCc-
Confidence            6888899998999999999998766321 11        1  223333 344443   445555543469999999984 


Q ss_pred             cccHHHHHHhCCCCCcEEEEeec
Q 021331           84 ADEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        84 ~~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      .......++.++...+++.++..
T Consensus        69 ~~~~~~~~~~l~~~G~~v~vg~~   91 (130)
T PF00107_consen   69 GDTLQEAIKLLRPGGRIVVVGVY   91 (130)
T ss_dssp             HHHHHHHHHHEEEEEEEEEESST
T ss_pred             HHHHHHHHHHhccCCEEEEEEcc
Confidence            34455666777755677766543

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=93.70  E-value=0.091  Score=45.06  Aligned_cols=60  Identities=20%  Similarity=0.226  Sum_probs=42.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|..+++.|.+.|++|++.+|+++.......           .+.       ....+..++++  ++|+||-+...
T Consensus         6 G~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g~-------~~~~~~~~~~~--~aDivi~~vp~   65 (291)
T TIGR01505         6 GLGIMGSPMSINLAKAGYQLHVTTIGPEVADELLA-----------AGA-------VTAETARQVTE--QADVIFTMVPD   65 (291)
T ss_pred             EecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-----------CCC-------cccCCHHHHHh--cCCEEEEecCC
Confidence            57999999999999999999999998765322111           111       11123456677  89999988664

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=93.70  E-value=0.15  Score=44.86  Aligned_cols=94  Identities=19%  Similarity=0.140  Sum_probs=53.1

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEE-EecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      +||||++|..+++.|.+. +++++++.++.+. .+.+..        ....+..+ ..++.+.+..  .+.  ++|+||-
T Consensus         8 iGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~-g~~l~~--------~~~~~~~~~~~~~~~~~~~--~~~--~vD~Vf~   74 (343)
T PRK00436          8 VGASGYTGGELLRLLLNHPEVEIVAVTSRSSA-GKPLSD--------VHPHLRGLVDLVLEPLDPE--ILA--GADVVFL   74 (343)
T ss_pred             ECCCCHHHHHHHHHHHcCCCceEEEEECcccc-CcchHH--------hCcccccccCceeecCCHH--Hhc--CCCEEEE
Confidence            499999999999999987 5788887764322 111110        01111111 1123333322  334  7999998


Q ss_pred             cCCCCcccHHHHHHhC-CCCCcEEEEeeceee
Q 021331           79 INGREADEVEPILDAL-PNLEQFIYCSSAGVY  109 (314)
Q Consensus        79 ~a~~~~~~~~~~~~~~-~~~~~~i~~Ss~~v~  109 (314)
                      +.+..  ....++..+ ...+++|=.|+..-+
T Consensus        75 alP~~--~~~~~v~~a~~aG~~VID~S~~fR~  104 (343)
T PRK00436         75 ALPHG--VSMDLAPQLLEAGVKVIDLSADFRL  104 (343)
T ss_pred             CCCcH--HHHHHHHHHHhCCCEEEECCcccCC
Confidence            77542  233344443 345678877776655

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=93.66  E-value=0.44  Score=39.69  Aligned_cols=101  Identities=17%  Similarity=0.197  Sum_probs=57.4

Q ss_pred             cccccHHHHHHHHHHCC-CeEEEEEcCCcc---cccCCCC-C----------CchhhhhccCceEEE--EecCCChhhHH
Q 021331            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAP---IAQQLPG-E----------SDQEFAEFSSKILHL--KGDRKDYDFVK   65 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~~---~~~~~~~-~----------~~~~~~~~~~~~~~~--~~D~~d~~~l~   65 (314)
                      |.|.+|+.+++.|...| .++++++.+.-.   ..++.-. .          ..+++.+..+.+++.  ...+ +++.+.
T Consensus        39 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~i-~~~~~~  117 (245)
T PRK05690         39 GLGGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINARL-DDDELA  117 (245)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEeccC-CHHHHH
Confidence            45999999999999999 478888766432   1111110 0          012233333444333  3333 345566


Q ss_pred             HhhhcCCccEEEEcCCCCcccHHHHHHhCC-CCCcEEEEeece
Q 021331           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAG  107 (314)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss~~  107 (314)
                      ++++  ++|+||.+... ...-..+-+.|. ....+|+.++.+
T Consensus       118 ~~~~--~~DiVi~~~D~-~~~r~~ln~~~~~~~ip~v~~~~~g  157 (245)
T PRK05690        118 ALIA--GHDLVLDCTDN-VATRNQLNRACFAAKKPLVSGAAIR  157 (245)
T ss_pred             HHHh--cCCEEEecCCC-HHHHHHHHHHHHHhCCEEEEeeecc
Confidence            7777  89999988753 332333455555 445677655443

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=93.64  E-value=0.098  Score=45.03  Aligned_cols=72  Identities=18%  Similarity=0.261  Sum_probs=45.5

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|..+++.|.+.|++|++.+|+++.......           .+..    ...+.+++.+.+.  .+|+||-+...
T Consensus         7 GlG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~-----------~g~~----~~~s~~~~~~~~~--~~dvIi~~vp~   69 (298)
T TIGR00872         7 GLGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKE-----------DRTT----GVANLRELSQRLS--APRVVWVMVPH   69 (298)
T ss_pred             cchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----------cCCc----ccCCHHHHHhhcC--CCCEEEEEcCc
Confidence            46999999999999999999999998766332111           1111    1124444444444  68988877654


Q ss_pred             CcccHHHHHHh
Q 021331           83 EADEVEPILDA   93 (314)
Q Consensus        83 ~~~~~~~~~~~   93 (314)
                      .  .+..+++.
T Consensus        70 ~--~~~~v~~~   78 (298)
T TIGR00872        70 G--IVDAVLEE   78 (298)
T ss_pred             h--HHHHHHHH
Confidence            3  34444433

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=93.55  E-value=0.24  Score=45.14  Aligned_cols=64  Identities=13%  Similarity=0.041  Sum_probs=44.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhh-cCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS-AKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~-~~~~d~vi~~a~   81 (314)
                      +||.+|.+|++.+..+|++|+.++-.... .  .           ..+++++.+  ....++.+++. ....|++|++|+
T Consensus       280 SSGkmG~alA~aa~~~GA~VtlI~Gp~~~-~--~-----------p~~v~~i~V--~ta~eM~~av~~~~~~Di~I~aAA  343 (475)
T PRK13982        280 SSGKQGFAIAAAAAAAGAEVTLISGPVDL-A--D-----------PQGVKVIHV--ESARQMLAAVEAALPADIAIFAAA  343 (475)
T ss_pred             CchHHHHHHHHHHHHCCCcEEEEeCCcCC-C--C-----------CCCceEEEe--cCHHHHHHHHHhhCCCCEEEEecc
Confidence            68999999999999999999999844321 0  1           145666544  34444444443 235799999988


Q ss_pred             C
Q 021331           82 R   82 (314)
Q Consensus        82 ~   82 (314)
                      +
T Consensus       344 V  344 (475)
T PRK13982        344 V  344 (475)
T ss_pred             c
Confidence            6

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=93.52  E-value=0.21  Score=42.38  Aligned_cols=29  Identities=31%  Similarity=0.563  Sum_probs=27.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |.|-+|..++..|++.||+|++.+|++++
T Consensus         7 GLG~MG~pmA~~L~~aG~~v~v~~r~~~k   35 (286)
T COG2084           7 GLGIMGSPMAANLLKAGHEVTVYNRTPEK   35 (286)
T ss_pred             cCchhhHHHHHHHHHCCCEEEEEeCChhh
Confidence            57999999999999999999999999877

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=93.49  E-value=0.069  Score=42.73  Aligned_cols=31  Identities=32%  Similarity=0.344  Sum_probs=27.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      +||+|.+|..|++.|.+.||+|++-+|+.++
T Consensus         6 i~GtGniG~alA~~~a~ag~eV~igs~r~~~   36 (211)
T COG2085           6 IIGTGNIGSALALRLAKAGHEVIIGSSRGPK   36 (211)
T ss_pred             EeccChHHHHHHHHHHhCCCeEEEecCCChh
Confidence            4899999999999999999999998776654

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=93.46  E-value=0.2  Score=43.57  Aligned_cols=60  Identities=15%  Similarity=0.168  Sum_probs=47.8

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      |.|.+|+.++.....-|++|++++-+++.......             -..+..+.+|++++.++.+  .+|+|-
T Consensus         8 GGGQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va-------------~~~i~~~~dD~~al~ela~--~~DViT   67 (375)
T COG0026           8 GGGQLGRMMALAAARLGIKVIVLDPDADAPAAQVA-------------DRVIVAAYDDPEALRELAA--KCDVIT   67 (375)
T ss_pred             cCcHHHHHHHHHHHhcCCEEEEecCCCCCchhhcc-------------cceeecCCCCHHHHHHHHh--hCCEEE
Confidence            45999999999999999999999977765443332             2345678889999999998  899885

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=93.44  E-value=0.27  Score=44.76  Aligned_cols=81  Identities=11%  Similarity=-0.020  Sum_probs=53.7

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|+.+++.|...|.+|+++.+++.......           ..++...        .+.+++.  ..|+||.+.+.
T Consensus       261 G~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-----------~~G~~~~--------~leell~--~ADIVI~atGt  319 (476)
T PTZ00075        261 GYGDVGKGCAQALRGFGARVVVTEIDPICALQAA-----------MEGYQVV--------TLEDVVE--TADIFVTATGN  319 (476)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-----------hcCceec--------cHHHHHh--cCCEEEECCCc
Confidence            4689999999999999999999888765421101           0122221        2556777  89999988764


Q ss_pred             CcccHHHHHHhCCCCCcEEEEe
Q 021331           83 EADEVEPILDALPNLEQFIYCS  104 (314)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~i~~S  104 (314)
                      ...-....++.|+....++.++
T Consensus       320 ~~iI~~e~~~~MKpGAiLINvG  341 (476)
T PTZ00075        320 KDIITLEHMRRMKNNAIVGNIG  341 (476)
T ss_pred             ccccCHHHHhccCCCcEEEEcC
Confidence            3333346777777655666554

>PRK08328 hypothetical protein; Provisional

Probab=93.41  E-value=0.79  Score=37.83  Aligned_cols=104  Identities=19%  Similarity=0.237  Sum_probs=57.3

Q ss_pred             cccccHHHHHHHHHHCC-CeEEEEEcCCccc---ccCCC---CCC---c------hhhhhccCceEEE--EecCCChhhH
Q 021331            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPI---AQQLP---GES---D------QEFAEFSSKILHL--KGDRKDYDFV   64 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~~~---~~~~~---~~~---~------~~~~~~~~~~~~~--~~D~~d~~~l   64 (314)
                      |.|.+|+++++.|...| .++++++.+.-..   .+++-   ...   .      .++....+.+.+.  ...+ +++.+
T Consensus        34 G~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~~~~-~~~~~  112 (231)
T PRK08328         34 GVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFVGRL-SEENI  112 (231)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEeccC-CHHHH
Confidence            56999999999999999 5788888664331   11110   000   0      1122222333332  2333 34446


Q ss_pred             HHhhhcCCccEEEEcCCCCcccHHHHH-HhCC-CCCcEEEEeeceeecc
Q 021331           65 KSSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYLK  111 (314)
Q Consensus        65 ~~~~~~~~~d~vi~~a~~~~~~~~~~~-~~~~-~~~~~i~~Ss~~v~~~  111 (314)
                      .++++  +.|+||.+... . .++.++ +.|. ....+|+.++.+.+|.
T Consensus       113 ~~~l~--~~D~Vid~~d~-~-~~r~~l~~~~~~~~ip~i~g~~~g~~G~  157 (231)
T PRK08328        113 DEVLK--GVDVIVDCLDN-F-ETRYLLDDYAHKKGIPLVHGAVEGTYGQ  157 (231)
T ss_pred             HHHHh--cCCEEEECCCC-H-HHHHHHHHHHHHcCCCEEEEeeccCEEE
Confidence            66676  78888877654 2 233333 3344 4457777666665553

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=93.41  E-value=0.22  Score=43.98  Aligned_cols=31  Identities=23%  Similarity=0.409  Sum_probs=25.1

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP   31 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~   31 (314)
                      +||||++|+.+++.|.+.. .+++++.++.+.
T Consensus         9 ~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~   40 (349)
T PRK08664          9 LGATGMVGQRFVQLLANHPWFEVTALAASERS   40 (349)
T ss_pred             ECCCCHHHHHHHHHHHcCCCceEEEEEcChhh
Confidence            5999999999999999875 488888555433

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=93.36  E-value=0.13  Score=44.46  Aligned_cols=29  Identities=31%  Similarity=0.484  Sum_probs=25.5

Q ss_pred             CCcccccHHHHHHHHHHCCC--eEEEEEcCC
Q 021331            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGK   29 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~   29 (314)
                      +|+||.+|..++..|+..|+  +|++++|+.
T Consensus         6 iGatG~vG~~~a~~l~~~g~~~~v~lvd~~~   36 (309)
T cd05294           6 IGASGRVGSATALLLAKEDVVKEINLISRPK   36 (309)
T ss_pred             ECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence            48899999999999999985  599999954

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=93.35  E-value=1  Score=37.96  Aligned_cols=103  Identities=17%  Similarity=0.180  Sum_probs=60.2

Q ss_pred             cccccHHHHHHHHHHCC-CeEEEEEcCCcc---cccCCCCC-----------CchhhhhccCceEEEEe-cCCChhhHHH
Q 021331            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAP---IAQQLPGE-----------SDQEFAEFSSKILHLKG-DRKDYDFVKS   66 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~~---~~~~~~~~-----------~~~~~~~~~~~~~~~~~-D~~d~~~l~~   66 (314)
                      |.|.+|+++++.|...| -++++++.+.-.   ...++...           ..+++.+..+.+++... +..+++.+.+
T Consensus        37 G~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~i~~e~~~~  116 (268)
T PRK15116         37 GIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFITPDNVAE  116 (268)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecccChhhHHH
Confidence            56999999999999999 688888866422   22222110           01233333344444433 2335556666


Q ss_pred             hhhcCCccEEEEcCCCCcccHHHHHHhCC-CCCcEEEEeece
Q 021331           67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAG  107 (314)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss~~  107 (314)
                      ++. .++|+||.+.... ..-..+.+.|. ....||....++
T Consensus       117 ll~-~~~D~VIdaiD~~-~~k~~L~~~c~~~~ip~I~~gGag  156 (268)
T PRK15116        117 YMS-AGFSYVIDAIDSV-RPKAALIAYCRRNKIPLVTTGGAG  156 (268)
T ss_pred             Hhc-CCCCEEEEcCCCH-HHHHHHHHHHHHcCCCEEEECCcc
Confidence            662 2699999988742 23345666676 445666554443

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=93.25  E-value=0.23  Score=44.21  Aligned_cols=61  Identities=18%  Similarity=0.152  Sum_probs=46.7

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      |+|.+|..++..+.+.|++|++++.++........             -.++.+|+.|.+.+.++.+  .+|+|..
T Consensus         9 G~Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~a-------------d~~~~~~~~D~~~l~~~a~--~~dvit~   69 (372)
T PRK06019          9 GGGQLGRMLALAAAPLGYKVIVLDPDPDSPAAQVA-------------DEVIVADYDDVAALRELAE--QCDVITY   69 (372)
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchhHhC-------------ceEEecCCCCHHHHHHHHh--cCCEEEe
Confidence            34899999999999999999999987654222121             2355678999999999988  8898753

>TIGR00936 ahcY adenosylhomocysteinase

Probab=93.13  E-value=0.29  Score=43.82  Aligned_cols=82  Identities=7%  Similarity=-0.008  Sum_probs=53.4

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|..+++.|...|.+|+++++++.......           ..++.+.     +   +++++.  +.|+||.+.|.
T Consensus       202 G~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-----------~~G~~v~-----~---leeal~--~aDVVItaTG~  260 (406)
T TIGR00936       202 GYGWCGKGIAMRARGMGARVIVTEVDPIRALEAA-----------MDGFRVM-----T---MEEAAK--IGDIFITATGN  260 (406)
T ss_pred             CCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-----------hcCCEeC-----C---HHHHHh--cCCEEEECCCC
Confidence            5799999999999999999999988775421111           1233221     2   234566  78999988774


Q ss_pred             CcccHHHHHHhCCCCCcEEEEee
Q 021331           83 EADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ........+..++....++.++.
T Consensus       261 ~~vI~~~~~~~mK~GailiN~G~  283 (406)
T TIGR00936       261 KDVIRGEHFENMKDGAIVANIGH  283 (406)
T ss_pred             HHHHHHHHHhcCCCCcEEEEECC
Confidence            33333346666676566676554

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK08655 prephenate dehydrogenase; Provisional

Probab=93.12  E-value=0.1  Score=47.55  Aligned_cols=31  Identities=29%  Similarity=0.544  Sum_probs=27.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      +||+|.+|..+++.|.+.|++|++.+|+++.
T Consensus         6 IGG~G~mG~slA~~L~~~G~~V~v~~r~~~~   36 (437)
T PRK08655          6 IGGTGGLGKWFARFLKEKGFEVIVTGRDPKK   36 (437)
T ss_pred             EecCCHHHHHHHHHHHHCCCEEEEEECChHH
Confidence            3789999999999999999999999988654

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=93.12  E-value=0.18  Score=44.20  Aligned_cols=90  Identities=12%  Similarity=0.042  Sum_probs=49.9

Q ss_pred             CCcccccHHHHHHHHHHCCC---eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      .||||++|..|++.|.+++|   ++..+....+. .+.+..          .+......++ ++    +.+.  ++|+||
T Consensus        13 vGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsa-Gk~~~~----------~~~~~~v~~~-~~----~~~~--~~D~vf   74 (344)
T PLN02383         13 VGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSA-GKKVTF----------EGRDYTVEEL-TE----DSFD--GVDIAL   74 (344)
T ss_pred             EcCCChHHHHHHHHHHhCCCCcceEEEEEccCCC-CCeeee----------cCceeEEEeC-CH----HHHc--CCCEEE
Confidence            49999999999999999776   44444333222 111110          1222222233 22    2345  799999


Q ss_pred             EcCCCCcccHHHHHHhC-CCCCcEEEEeeceeec
Q 021331           78 DINGREADEVEPILDAL-PNLEQFIYCSSAGVYL  110 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~-~~~~~~i~~Ss~~v~~  110 (314)
                      .+++..  ....+...+ ....++|=.|++.-+.
T Consensus        75 ~a~p~~--~s~~~~~~~~~~g~~VIDlS~~fR~~  106 (344)
T PLN02383         75 FSAGGS--ISKKFGPIAVDKGAVVVDNSSAFRME  106 (344)
T ss_pred             ECCCcH--HHHHHHHHHHhCCCEEEECCchhhcC
Confidence            888754  233333333 3334677777765443

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=93.11  E-value=0.33  Score=42.38  Aligned_cols=79  Identities=14%  Similarity=0.143  Sum_probs=50.7

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|+.+++.|...|++|++.+|++....               ...       .-..++.++++  ++|+|+.+...
T Consensus       153 G~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~---------------~~~-------~~~~~l~ell~--~aDiVil~lP~  208 (330)
T PRK12480        153 GTGRIGAATAKIYAGFGATITAYDAYPNKDL---------------DFL-------TYKDSVKEAIK--DADIISLHVPA  208 (330)
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEeCChhHhh---------------hhh-------hccCCHHHHHh--cCCEEEEeCCC
Confidence            5799999999999999999999998764311               000       01234678888  89998877655


Q ss_pred             Ccc--c--HHHHHHhCCCCCcEEEEee
Q 021331           83 EAD--E--VEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        83 ~~~--~--~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +..  +  ...++..++....||.+|-
T Consensus       209 t~~t~~li~~~~l~~mk~gavlIN~aR  235 (330)
T PRK12480        209 NKESYHLFDKAMFDHVKKGAILVNAAR  235 (330)
T ss_pred             cHHHHHHHhHHHHhcCCCCcEEEEcCC
Confidence            432  1  2234444554444554443

>PRK08223 hypothetical protein; Validated

Probab=93.07  E-value=1.1  Score=38.17  Aligned_cols=101  Identities=12%  Similarity=-0.014  Sum_probs=58.2

Q ss_pred             cccccHHHHHHHHHHCC-CeEEEEEcCCcc---cccCCC-CC----------CchhhhhccCceEEEE--ecCCChhhHH
Q 021331            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAP---IAQQLP-GE----------SDQEFAEFSSKILHLK--GDRKDYDFVK   65 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~~---~~~~~~-~~----------~~~~~~~~~~~~~~~~--~D~~d~~~l~   65 (314)
                      |.|.+|+.+++.|...| -++++++.+.-.   ..+++- ..          ..+++.+..+.+++..  ..+ +++.+.
T Consensus        34 G~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~~l-~~~n~~  112 (287)
T PRK08223         34 GLGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPEGI-GKENAD  112 (287)
T ss_pred             CCCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEeccc-CccCHH
Confidence            56999999999999998 578888866432   222211 00          0123333334444433  333 345567


Q ss_pred             HhhhcCCccEEEEcCCCCcccHH-HHHHhCC-CCCcEEEEeec
Q 021331           66 SSLSAKGFDVVYDINGREADEVE-PILDALP-NLEQFIYCSSA  106 (314)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~-~~~~~~~-~~~~~i~~Ss~  106 (314)
                      ++++  ++|+||.+.......++ .+-++|. ....+|+.+..
T Consensus       113 ~ll~--~~DlVvD~~D~~~~~~r~~ln~~c~~~~iP~V~~~~~  153 (287)
T PRK08223        113 AFLD--GVDVYVDGLDFFEFDARRLVFAACQQRGIPALTAAPL  153 (287)
T ss_pred             HHHh--CCCEEEECCCCCcHHHHHHHHHHHHHcCCCEEEEecc
Confidence            7777  88999877654222333 3445555 44577776543

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=92.98  E-value=0.053  Score=41.57  Aligned_cols=67  Identities=12%  Similarity=0.049  Sum_probs=42.2

Q ss_pred             CcccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            2 GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |+ |.+|..+++.|.+.| ++|++.+|+.+........          .+...+..+..+.   .+.+.  ++|+||.+.
T Consensus        26 G~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~----------~~~~~~~~~~~~~---~~~~~--~~Dvvi~~~   89 (155)
T cd01065          26 GA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAER----------FGELGIAIAYLDL---EELLA--EADLIINTT   89 (155)
T ss_pred             CC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHH----------Hhhcccceeecch---hhccc--cCCEEEeCc
Confidence            54 999999999999996 8899999887653211110          0111112233333   33355  899999997


Q ss_pred             CCCc
Q 021331           81 GREA   84 (314)
Q Consensus        81 ~~~~   84 (314)
                      +...
T Consensus        90 ~~~~   93 (155)
T cd01065          90 PVGM   93 (155)
T ss_pred             CCCC
Confidence            7654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=92.96  E-value=0.58  Score=40.67  Aligned_cols=91  Identities=19%  Similarity=0.189  Sum_probs=56.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh---hhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~l~~~~~~~~~d~vi   77 (314)
                      +||+|.+|..+++.+...|.+|++++++..+... +.        +  -+...+ .|..+.   +.+.+.....++|++|
T Consensus       150 ~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~-~~--------~--~g~~~~-i~~~~~~~~~~v~~~~~~~~~d~vi  217 (324)
T cd08291         150 TAAASALGRMLVRLCKADGIKVINIVRRKEQVDL-LK--------K--IGAEYV-LNSSDPDFLEDLKELIAKLNATIFF  217 (324)
T ss_pred             ccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH--------H--cCCcEE-EECCCccHHHHHHHHhCCCCCcEEE
Confidence            3789999999999888889999998887655321 11        0  122211 233332   2333443334699999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ++.|..  .....++.+....+++.++.
T Consensus       218 d~~g~~--~~~~~~~~l~~~G~~v~~g~  243 (324)
T cd08291         218 DAVGGG--LTGQILLAMPYGSTLYVYGY  243 (324)
T ss_pred             ECCCcH--HHHHHHHhhCCCCEEEEEEe
Confidence            998743  23445666665568887665

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=92.95  E-value=0.21  Score=43.31  Aligned_cols=89  Identities=20%  Similarity=0.237  Sum_probs=55.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhh-cCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS-AKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~-~~~~d~vi~~   79 (314)
                      +||+|.+|..+++.+...|.+|++++++.+.... +.        .  .+...+ .+..+   +.+.+. ..++|+++++
T Consensus       169 ~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~-~~--------~--~~~~~~-~~~~~---~~~~~~~~~~~d~v~~~  233 (332)
T cd08259         169 TGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKI-LK--------E--LGADYV-IDGSK---FSEDVKKLGGADVVIEL  233 (332)
T ss_pred             ECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHH-HH--------H--cCCcEE-EecHH---HHHHHHhccCCCEEEEC
Confidence            4899999999999999999999999887654221 11        0  111111 12222   222222 1269999999


Q ss_pred             CCCCcccHHHHHHhCCCCCcEEEEeec
Q 021331           80 NGREADEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        80 a~~~~~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      ++...  ....++.+....++|.++..
T Consensus       234 ~g~~~--~~~~~~~~~~~g~~v~~g~~  258 (332)
T cd08259         234 VGSPT--IEESLRSLNKGGRLVLIGNV  258 (332)
T ss_pred             CChHH--HHHHHHHhhcCCEEEEEcCC
Confidence            87532  45566666655678877653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=92.93  E-value=0.59  Score=39.54  Aligned_cols=99  Identities=13%  Similarity=0.151  Sum_probs=68.2

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEE-EecCCChhhHHHhhhc---CCccEEE
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKDYDFVKSSLSA---KGFDVVY   77 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~d~~~l~~~~~~---~~~d~vi   77 (314)
                      ||+|-+|+-+.+-....|..|++..-+.++..-...            .+-+. ..|+.++..+.+++..   .++|+-|
T Consensus       161 aAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~------------~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYf  228 (343)
T KOG1196|consen  161 AASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKT------------KFGFDDAFNYKEESDLSAALKRCFPEGIDIYF  228 (343)
T ss_pred             eccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHh------------ccCCccceeccCccCHHHHHHHhCCCcceEEE
Confidence            789999998888888889999999888876431111            11111 2356666566666654   3789999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEeeceeeccCCC
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDL  114 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~~v~~~~~~  114 (314)
                      .+.|-+  ....++..|....|++..+-.+.|.....
T Consensus       229 eNVGG~--~lDavl~nM~~~gri~~CG~ISqYN~~~~  263 (343)
T KOG1196|consen  229 ENVGGK--MLDAVLLNMNLHGRIAVCGMISQYNLENP  263 (343)
T ss_pred             eccCcH--HHHHHHHhhhhccceEeeeeehhccccCC
Confidence            887743  34456777776679999998888865543

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=92.90  E-value=0.18  Score=43.81  Aligned_cols=29  Identities=17%  Similarity=0.095  Sum_probs=24.8

Q ss_pred             CCcccccHHHHHHHHHHCC--C-----eEEEEEcCC
Q 021331            1 MGGTRFIGVFLSRLLVKEG--H-----QVTLFTRGK   29 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~-----~V~~~~r~~   29 (314)
                      +|++|.+|+.++-.|+..+  .     +++.++.+.
T Consensus         9 IGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~   44 (323)
T TIGR01759         9 TGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPP   44 (323)
T ss_pred             ECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCC
Confidence            4888999999999999887  3     789898864

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd08293 PTGR2 Prostaglandin reductase

Probab=92.89  E-value=0.47  Score=41.59  Aligned_cols=93  Identities=14%  Similarity=0.154  Sum_probs=58.1

Q ss_pred             CCcccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh---hhHHHhhhcCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~l~~~~~~~~~d~v   76 (314)
                      +||+|.+|..+++.+...|. +|++++++.++......          .-++..+ .|..+.   +.+.++.. .++|++
T Consensus       161 ~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~----------~lGa~~v-i~~~~~~~~~~i~~~~~-~gvd~v  228 (345)
T cd08293         161 SGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKS----------ELGFDAA-INYKTDNVAERLRELCP-EGVDVY  228 (345)
T ss_pred             ECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----------hcCCcEE-EECCCCCHHHHHHHHCC-CCceEE
Confidence            48899999999999988998 79999887655321100          0122221 233322   22333322 379999


Q ss_pred             EEcCCCCcccHHHHHHhCCCCCcEEEEeece
Q 021331           77 YDINGREADEVEPILDALPNLEQFIYCSSAG  107 (314)
Q Consensus        77 i~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~~  107 (314)
                      +++.+..  .....++.++...+++.++...
T Consensus       229 id~~g~~--~~~~~~~~l~~~G~iv~~G~~~  257 (345)
T cd08293         229 FDNVGGE--ISDTVISQMNENSHIILCGQIS  257 (345)
T ss_pred             EECCCcH--HHHHHHHHhccCCEEEEEeeee
Confidence            9998753  2456677777667888777543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PLN02928 oxidoreductase family protein

Probab=92.86  E-value=0.41  Score=42.12  Aligned_cols=91  Identities=13%  Similarity=0.134  Sum_probs=55.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccC---CCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ---LPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      |.|.||+.+++.|...|.+|++.+|+.......   ++.          ..+.-+........++.+++.  +.|+|+.+
T Consensus       166 G~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~L~ell~--~aDiVvl~  233 (347)
T PLN02928        166 GYGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPN----------GDVDDLVDEKGGHEDIYEFAG--EADIVVLC  233 (347)
T ss_pred             CCCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhcccc----------ccccccccccCcccCHHHHHh--hCCEEEEC
Confidence            679999999999999999999998864321100   000          000000001113457889998  89999988


Q ss_pred             CCCCcc----cHHHHHHhCCCCCcEEEEee
Q 021331           80 NGREAD----EVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        80 a~~~~~----~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ...+..    -....++.|+....||.++-
T Consensus       234 lPlt~~T~~li~~~~l~~Mk~ga~lINvaR  263 (347)
T PLN02928        234 CTLTKETAGIVNDEFLSSMKKGALLVNIAR  263 (347)
T ss_pred             CCCChHhhcccCHHHHhcCCCCeEEEECCC
Confidence            765432    12345555665556665553

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=92.81  E-value=0.42  Score=41.49  Aligned_cols=93  Identities=19%  Similarity=0.210  Sum_probs=59.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHH---hhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS---SLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~---~~~~~~~d~vi   77 (314)
                      +|++|.+|..+++.+...|.+|++++++...... +.        +  .+.. ...|..+.+....   .....++|.++
T Consensus       173 ~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~-~~--------~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~i  240 (342)
T cd08266         173 HGAGSGVGSAAIQIAKLFGATVIATAGSEDKLER-AK--------E--LGAD-YVIDYRKEDFVREVRELTGKRGVDVVV  240 (342)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH--------H--cCCC-eEEecCChHHHHHHHHHhCCCCCcEEE
Confidence            4888999999999999999999998887654221 11        0  1111 1234444433333   22233689999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEeece
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~~  107 (314)
                      ++++.  ......++.+....+++.+++..
T Consensus       241 ~~~g~--~~~~~~~~~l~~~G~~v~~~~~~  268 (342)
T cd08266         241 EHVGA--ATWEKSLKSLARGGRLVTCGATT  268 (342)
T ss_pred             ECCcH--HHHHHHHHHhhcCCEEEEEecCC
Confidence            99875  33455666666556888887643

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK06487 glycerate dehydrogenase; Provisional

Probab=92.68  E-value=0.41  Score=41.61  Aligned_cols=76  Identities=16%  Similarity=0.023  Sum_probs=50.7

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|..-|.+|++.+|....                 ...        +..++.++++  ..|+|+.+...
T Consensus       155 G~G~IG~~vA~~l~~fgm~V~~~~~~~~~-----------------~~~--------~~~~l~ell~--~sDiv~l~lPl  207 (317)
T PRK06487        155 GHGELGGAVARLAEAFGMRVLIGQLPGRP-----------------ARP--------DRLPLDELLP--QVDALTLHCPL  207 (317)
T ss_pred             CCCHHHHHHHHHHhhCCCEEEEECCCCCc-----------------ccc--------cccCHHHHHH--hCCEEEECCCC
Confidence            56999999999999889999998875321                 111        1225888898  89998877654


Q ss_pred             Ccc----cHHHHHHhCCCCCcEEEEee
Q 021331           83 EAD----EVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        83 ~~~----~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +..    -....+..|+....||.+|=
T Consensus       208 t~~T~~li~~~~~~~mk~ga~lIN~aR  234 (317)
T PRK06487        208 TEHTRHLIGARELALMKPGALLINTAR  234 (317)
T ss_pred             ChHHhcCcCHHHHhcCCCCeEEEECCC
Confidence            332    12345555665556665553

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=92.64  E-value=1.2  Score=39.47  Aligned_cols=104  Identities=13%  Similarity=0.084  Sum_probs=62.3

Q ss_pred             cccccHHHHHHHHHHCC-CeEEEEEcCCcc---cccCCCCC-----------CchhhhhccCceEEE--EecCCChhhHH
Q 021331            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAP---IAQQLPGE-----------SDQEFAEFSSKILHL--KGDRKDYDFVK   65 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~~---~~~~~~~~-----------~~~~~~~~~~~~~~~--~~D~~d~~~l~   65 (314)
                      |.|.+|+.+++.|...| -++++++.+.-.   ..+++-..           ..+++.+..+.+++.  ...+ +++...
T Consensus        35 G~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~i-~~~~~~  113 (355)
T PRK05597         35 GAGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRRL-TWSNAL  113 (355)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEeec-CHHHHH
Confidence            56999999999999999 478888876522   12111100           002333333444443  3344 345566


Q ss_pred             HhhhcCCccEEEEcCCCCcccHHHHHHhCC-CCCcEEEEeeceeec
Q 021331           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (314)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss~~v~~  110 (314)
                      ++++  ++|+||.+.... ..-..+-++|. ....+|+.+..+.+|
T Consensus       114 ~~~~--~~DvVvd~~d~~-~~r~~~n~~c~~~~ip~v~~~~~g~~g  156 (355)
T PRK05597        114 DELR--DADVILDGSDNF-DTRHLASWAAARLGIPHVWASILGFDA  156 (355)
T ss_pred             HHHh--CCCEEEECCCCH-HHHHHHHHHHHHcCCCEEEEEEecCeE
Confidence            7777  899999998642 22223445565 556788887766555

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=92.61  E-value=0.46  Score=42.20  Aligned_cols=77  Identities=18%  Similarity=0.147  Sum_probs=49.6

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|.+|.+.++.....                 .      +.....++++++.  ++|+|+.....
T Consensus       123 G~G~IG~~vA~~l~a~G~~V~~~dp~~~~~-----------------~------~~~~~~~L~ell~--~sDiI~lh~PL  177 (378)
T PRK15438        123 GVGNVGRRLQARLEALGIKTLLCDPPRADR-----------------G------DEGDFRSLDELVQ--EADILTFHTPL  177 (378)
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCccccc-----------------c------cccccCCHHHHHh--hCCEEEEeCCC
Confidence            679999999999999999999987532210                 0      0012345888888  89998865544


Q ss_pred             Ccc---cH-----HHHHHhCCCCCcEEEEe
Q 021331           83 EAD---EV-----EPILDALPNLEQFIYCS  104 (314)
Q Consensus        83 ~~~---~~-----~~~~~~~~~~~~~i~~S  104 (314)
                      +..   .+     ...+..|+...-+|.+|
T Consensus       178 t~~g~~~T~~li~~~~l~~mk~gailIN~a  207 (378)
T PRK15438        178 FKDGPYKTLHLADEKLIRSLKPGAILINAC  207 (378)
T ss_pred             CCCcccccccccCHHHHhcCCCCcEEEECC
Confidence            332   13     34555666555555444

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=92.61  E-value=0.075  Score=40.16  Aligned_cols=71  Identities=18%  Similarity=0.251  Sum_probs=44.2

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCChhhHHHhhhcCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~~~d~v   76 (314)
                      +|++|.+|++++-.|...+  .+++.++++.........     ++++.  .......... .+.    +.++  ++|+|
T Consensus         6 iGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~-----Dl~~~~~~~~~~~~i~~-~~~----~~~~--~aDiv   73 (141)
T PF00056_consen    6 IGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEAL-----DLSHASAPLPSPVRITS-GDY----EALK--DADIV   73 (141)
T ss_dssp             ESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHH-----HHHHHHHGSTEEEEEEE-SSG----GGGT--TESEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeeh-----hhhhhhhhccccccccc-ccc----cccc--cccEE
Confidence            4889999999999999986  689999998654321111     11111  1112221111 222    3455  89999


Q ss_pred             EEcCCCC
Q 021331           77 YDINGRE   83 (314)
Q Consensus        77 i~~a~~~   83 (314)
                      |-++|..
T Consensus        74 vitag~~   80 (141)
T PF00056_consen   74 VITAGVP   80 (141)
T ss_dssp             EETTSTS
T ss_pred             EEecccc
Confidence            9999873

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase

Probab=92.53  E-value=0.35  Score=41.37  Aligned_cols=60  Identities=18%  Similarity=0.182  Sum_probs=41.8

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|..+++.|++.|++|++.+|+++.......           .++.     .  ..+..++.+  ++|+||-+...
T Consensus         3 GlG~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~-----------~g~~-----~--~~s~~~~~~--~advVil~vp~   62 (288)
T TIGR01692         3 GLGNMGGPMAANLLKAGHPVRVFDLFPDAVEEAVA-----------AGAQ-----A--AASPAEAAE--GADRVITMLPA   62 (288)
T ss_pred             cccHhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH-----------cCCe-----e--cCCHHHHHh--cCCEEEEeCCC
Confidence            57999999999999999999999998766332111           1221     1  123456666  78999887654

This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=92.51  E-value=0.11  Score=46.93  Aligned_cols=31  Identities=16%  Similarity=0.230  Sum_probs=27.8

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA   33 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   33 (314)
                      |.|++|..++..|.+.|++|+++++++....
T Consensus        10 GlG~~G~~~A~~La~~G~~V~~~D~~~~~v~   40 (415)
T PRK11064         10 GLGYIGLPTAAAFASRQKQVIGVDINQHAVD   40 (415)
T ss_pred             CcchhhHHHHHHHHhCCCEEEEEeCCHHHHH
Confidence            5799999999999999999999999887643

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=92.49  E-value=0.091  Score=45.57  Aligned_cols=86  Identities=8%  Similarity=0.065  Sum_probs=47.7

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhcc-CceE--EEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKIL--HLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      |+|-+|..++..|+..|++|++.+++++....... ...+.+.... .+..  .....+.-..+++++++  ++|.|+-+
T Consensus        14 GaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~--~aDlViEa   90 (321)
T PRK07066         14 GSGVIGSGWVARALAHGLDVVAWDPAPGAEAALRA-NVANAWPALERQGLAPGASPARLRFVATIEACVA--DADFIQES   90 (321)
T ss_pred             CcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH-HHHHHHHHHHHcCCChhhHHhhceecCCHHHHhc--CCCEEEEC
Confidence            56999999999999999999999998764321000 0000000000 0000  00001111124667777  89999998


Q ss_pred             CCCCcccHHHHH
Q 021331           80 NGREADEVEPIL   91 (314)
Q Consensus        80 a~~~~~~~~~~~   91 (314)
                      ...+..--+.+.
T Consensus        91 vpE~l~vK~~lf  102 (321)
T PRK07066         91 APEREALKLELH  102 (321)
T ss_pred             CcCCHHHHHHHH
Confidence            877655433333

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=92.48  E-value=0.68  Score=41.03  Aligned_cols=90  Identities=14%  Similarity=0.134  Sum_probs=56.4

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      .|+|.+|..+++.+...|.+|++++.+.++.......          -++..+ .|..+.+.+.+...  ++|+||.+.|
T Consensus       190 ~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~----------~Ga~~v-i~~~~~~~~~~~~~--~~D~vid~~g  256 (360)
T PLN02586        190 AGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINR----------LGADSF-LVSTDPEKMKAAIG--TMDYIIDTVS  256 (360)
T ss_pred             ECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHh----------CCCcEE-EcCCCHHHHHhhcC--CCCEEEECCC
Confidence            3569999999999999999988887765442211110          122222 23334445555544  6899999988


Q ss_pred             CCcccHHHHHHhCCCCCcEEEEee
Q 021331           82 READEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      . .......++.++...+++.++.
T Consensus       257 ~-~~~~~~~~~~l~~~G~iv~vG~  279 (360)
T PLN02586        257 A-VHALGPLLGLLKVNGKLITLGL  279 (360)
T ss_pred             C-HHHHHHHHHHhcCCcEEEEeCC
Confidence            3 2234556777775568886653

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=92.37  E-value=1.3  Score=37.02  Aligned_cols=76  Identities=18%  Similarity=0.075  Sum_probs=58.7

Q ss_pred             cHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCCCc-c
Q 021331            7 IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREA-D   85 (314)
Q Consensus         7 iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~~~-~   85 (314)
                      =|..|++.|.+.|++|++..-.....   ..          ..++.++.+-+.+.+++.+++.+.+++.||++.-+.. .
T Consensus        13 egr~la~~L~~~g~~v~~Svat~~g~---~~----------~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPfA~~   79 (248)
T PRK08057         13 EARALARALAAAGVDIVLSLAGRTGG---PA----------DLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPYAAQ   79 (248)
T ss_pred             HHHHHHHHHHhCCCeEEEEEccCCCC---cc----------cCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCccHHH
Confidence            48899999999999888766554332   11          1467788888889999999999999999999876543 4


Q ss_pred             cHHHHHHhCC
Q 021331           86 EVEPILDALP   95 (314)
Q Consensus        86 ~~~~~~~~~~   95 (314)
                      .++++.++|.
T Consensus        80 is~~a~~ac~   89 (248)
T PRK08057         80 ISANAAAACR   89 (248)
T ss_pred             HHHHHHHHHH
Confidence            5778888888

>PRK13243 glyoxylate reductase; Reviewed

Probab=92.37  E-value=0.27  Score=43.05  Aligned_cols=84  Identities=18%  Similarity=0.136  Sum_probs=55.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|.+|++.+|......  ..          ..++        ...++.+++.  ++|+|+.+...
T Consensus       157 G~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~--~~----------~~~~--------~~~~l~ell~--~aDiV~l~lP~  214 (333)
T PRK13243        157 GFGRIGQAVARRAKGFGMRILYYSRTRKPEA--EK----------ELGA--------EYRPLEELLR--ESDFVSLHVPL  214 (333)
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCCChhh--HH----------HcCC--------EecCHHHHHh--hCCEEEEeCCC
Confidence            5699999999999999999999988754311  00          0111        1234677888  89999977754


Q ss_pred             Ccc----cHHHHHHhCCCCCcEEEEeecee
Q 021331           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (314)
Q Consensus        83 ~~~----~~~~~~~~~~~~~~~i~~Ss~~v  108 (314)
                      +..    -....++.|+....+|.+|...+
T Consensus       215 t~~T~~~i~~~~~~~mk~ga~lIN~aRg~~  244 (333)
T PRK13243        215 TKETYHMINEERLKLMKPTAILVNTARGKV  244 (333)
T ss_pred             ChHHhhccCHHHHhcCCCCeEEEECcCchh
Confidence            331    12345666765567777766544

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=92.34  E-value=1.8  Score=34.72  Aligned_cols=28  Identities=21%  Similarity=0.369  Sum_probs=22.7

Q ss_pred             cccccHHHHHHHHHHCC-CeEEEEEcCCc
Q 021331            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKA   30 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~   30 (314)
                      |.|.+|.++++.|...| .++++++...-
T Consensus        28 G~gglG~evak~La~~GVg~i~lvD~d~v   56 (197)
T cd01492          28 GLKGLGAEIAKNLVLSGIGSLTILDDRTV   56 (197)
T ss_pred             cCCHHHHHHHHHHHHcCCCEEEEEECCcc
Confidence            35669999999999999 47888886643

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=92.30  E-value=0.31  Score=42.12  Aligned_cols=71  Identities=18%  Similarity=0.254  Sum_probs=42.5

Q ss_pred             cccccHHHHHHHHHHCC--CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            3 GTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |+|.+|..++..|+..|  ++|++++++.+.......+ ..+...-......+..   .+.+    .+.  ++|+||.++
T Consensus         7 GaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~d-L~~~~~~~~~~~~i~~---~~~~----~l~--~aDIVIita   76 (306)
T cd05291           7 GAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALD-LEDALAFLPSPVKIKA---GDYS----DCK--DADIVVITA   76 (306)
T ss_pred             CCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhh-HHHHhhccCCCeEEEc---CCHH----HhC--CCCEEEEcc
Confidence            35999999999999998  6899999987663322211 0000000001222221   2222    245  899999999


Q ss_pred             CCC
Q 021331           81 GRE   83 (314)
Q Consensus        81 ~~~   83 (314)
                      |..
T Consensus        77 g~~   79 (306)
T cd05291          77 GAP   79 (306)
T ss_pred             CCC
Confidence            873

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>COG1255 Uncharacterized protein conserved in archaea [Function unknown]

Probab=92.29  E-value=0.96  Score=32.31  Aligned_cols=67  Identities=18%  Similarity=0.254  Sum_probs=51.4

Q ss_pred             HHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCCCcccHH
Q 021331            9 VFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVE   88 (314)
Q Consensus         9 ~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~~~~~~~   88 (314)
                      ..+++.|.+.|++|++++-+....               ..+++++.-|++||+-  .+.+  +.|.|+..-. ..+...
T Consensus        26 ~~VA~~L~e~g~dv~atDI~~~~a---------------~~g~~~v~DDitnP~~--~iY~--~A~lIYSiRp-ppEl~~   85 (129)
T COG1255          26 LDVAKRLAERGFDVLATDINEKTA---------------PEGLRFVVDDITNPNI--SIYE--GADLIYSIRP-PPELQS   85 (129)
T ss_pred             HHHHHHHHHcCCcEEEEecccccC---------------cccceEEEccCCCccH--HHhh--CccceeecCC-CHHHHH
Confidence            368899999999999999887642               2689999999999983  4455  7888776543 456667


Q ss_pred             HHHHhCC
Q 021331           89 PILDALP   95 (314)
Q Consensus        89 ~~~~~~~   95 (314)
                      .+++.+.
T Consensus        86 ~ildva~   92 (129)
T COG1255          86 AILDVAK   92 (129)
T ss_pred             HHHHHHH
Confidence            7888777

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=92.28  E-value=0.46  Score=41.11  Aligned_cols=92  Identities=22%  Similarity=0.195  Sum_probs=58.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh-hhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~l~~~~~~~~~d~vi~~   79 (314)
                      .|++|.+|..+++.+...|.+|++++++.++.... ..          -++..+ .|..+. ..+.......++|.|+++
T Consensus       153 ~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~----------~g~~~~-~~~~~~~~~~~~~~~~~~~d~vi~~  220 (325)
T cd05280         153 TGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL-KS----------LGASEV-LDREDLLDESKKPLLKARWAGAIDT  220 (325)
T ss_pred             ECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hh----------cCCcEE-EcchhHHHHHHHHhcCCCccEEEEC
Confidence            47899999999998888999999998877553211 10          122222 222222 123333333468999998


Q ss_pred             CCCCcccHHHHHHhCCCCCcEEEEeec
Q 021331           80 NGREADEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        80 a~~~~~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      .+.  ......++.+....++|.+++.
T Consensus       221 ~~~--~~~~~~~~~l~~~g~~v~~g~~  245 (325)
T cd05280         221 VGG--DVLANLLKQTKYGGVVASCGNA  245 (325)
T ss_pred             Cch--HHHHHHHHhhcCCCEEEEEecC
Confidence            774  3456667777766688877654

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PRK07574 formate dehydrogenase; Provisional

Probab=92.26  E-value=0.39  Score=42.80  Aligned_cols=84  Identities=18%  Similarity=0.079  Sum_probs=53.9

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|.+|++.+|....... ..          ..++       .-..+++++++  .+|+|+.+...
T Consensus       199 G~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~-~~----------~~g~-------~~~~~l~ell~--~aDvV~l~lPl  258 (385)
T PRK07574        199 GAGRIGLAVLRRLKPFDVKLHYTDRHRLPEEV-EQ----------ELGL-------TYHVSFDSLVS--VCDVVTIHCPL  258 (385)
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEECCCCCchhh-Hh----------hcCc-------eecCCHHHHhh--cCCEEEEcCCC
Confidence            56999999999999999999999987532110 00          0111       11235778888  89999877664


Q ss_pred             CcccHH-----HHHHhCCCCCcEEEEeece
Q 021331           83 EADEVE-----PILDALPNLEQFIYCSSAG  107 (314)
Q Consensus        83 ~~~~~~-----~~~~~~~~~~~~i~~Ss~~  107 (314)
                      +. .++     .++..|+....||.+|-..
T Consensus       259 t~-~T~~li~~~~l~~mk~ga~lIN~aRG~  287 (385)
T PRK07574        259 HP-ETEHLFDADVLSRMKRGSYLVNTARGK  287 (385)
T ss_pred             CH-HHHHHhCHHHHhcCCCCcEEEECCCCc
Confidence            33 233     3455566555666655443

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=92.11  E-value=0.76  Score=39.48  Aligned_cols=92  Identities=15%  Similarity=0.177  Sum_probs=57.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhh---HHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~---l~~~~~~~~~d~vi   77 (314)
                      +|++|.+|..+++.+...|.+|++++++...... +.        .  .++.. ..|..+++.   +.+.....++|.++
T Consensus       151 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~-~~--------~--~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi  218 (325)
T cd08253         151 HGGSGAVGHAAVQLARWAGARVIATASSAEGAEL-VR--------Q--AGADA-VFNYRAEDLADRILAATAGQGVDVII  218 (325)
T ss_pred             EcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH--------H--cCCCE-EEeCCCcCHHHHHHHHcCCCceEEEE
Confidence            4789999999999999999999999887654221 11        0  12211 134444332   33333334799999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEeec
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      ++++..  ......+.+....+++.+++.
T Consensus       219 ~~~~~~--~~~~~~~~l~~~g~~v~~~~~  245 (325)
T cd08253         219 EVLANV--NLAKDLDVLAPGGRIVVYGSG  245 (325)
T ss_pred             ECCchH--HHHHHHHhhCCCCEEEEEeec
Confidence            988753  233444555555688877764

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=92.10  E-value=0.34  Score=43.08  Aligned_cols=81  Identities=21%  Similarity=0.199  Sum_probs=52.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|.+|++.++......               ...        ...+++++++  ++|+|+.....
T Consensus       123 G~G~IG~~va~~l~a~G~~V~~~Dp~~~~~~---------------~~~--------~~~~l~ell~--~aDiV~lh~Pl  177 (381)
T PRK00257        123 GAGHVGGRLVRVLRGLGWKVLVCDPPRQEAE---------------GDG--------DFVSLERILE--ECDVISLHTPL  177 (381)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCcccccc---------------cCc--------cccCHHHHHh--hCCEEEEeCcC
Confidence            6799999999999999999999876432210               011        1234778888  89998866554


Q ss_pred             Ccc---cH-----HHHHHhCCCCCcEEEEeecee
Q 021331           83 EAD---EV-----EPILDALPNLEQFIYCSSAGV  108 (314)
Q Consensus        83 ~~~---~~-----~~~~~~~~~~~~~i~~Ss~~v  108 (314)
                      +..   .+     ...+..|+....+|.+|-..+
T Consensus       178 t~~g~~~T~~li~~~~l~~mk~gailIN~aRG~v  211 (381)
T PRK00257        178 TKEGEHPTRHLLDEAFLASLRPGAWLINASRGAV  211 (381)
T ss_pred             CCCccccccccCCHHHHhcCCCCeEEEECCCCcc
Confidence            332   22     345555665556666555443

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=92.06  E-value=7.5  Score=33.72  Aligned_cols=80  Identities=21%  Similarity=0.289  Sum_probs=51.6

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEE-----ecCCChhhHHHhhhcCCccEEE
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK-----GDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      |+|.-|.+|+..|.++||+|+.-.|+++.......         .+.+.++..     ..+.-..++.++++  ++|+|+
T Consensus         8 GaGswGTALA~~la~ng~~V~lw~r~~~~~~~i~~---------~~~N~~yLp~i~lp~~l~at~Dl~~a~~--~ad~iv   76 (329)
T COG0240           8 GAGSWGTALAKVLARNGHEVRLWGRDEEIVAEINE---------TRENPKYLPGILLPPNLKATTDLAEALD--GADIIV   76 (329)
T ss_pred             cCChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHh---------cCcCccccCCccCCcccccccCHHHHHh--cCCEEE
Confidence            46999999999999999999999998654322111         012222332     23334466888888  899998


Q ss_pred             EcCCCCcccHHHHHHhCC
Q 021331           78 DINGREADEVEPILDALP   95 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~   95 (314)
                      -...  ....+.+++.+.
T Consensus        77 ~avP--s~~~r~v~~~l~   92 (329)
T COG0240          77 IAVP--SQALREVLRQLK   92 (329)
T ss_pred             EECC--hHHHHHHHHHHh
Confidence            6654  334445555543

>PF03447 NAD_binding_3: Homoserine dehydrogenase, NAD binding domain; InterPro: IPR005106 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway

Probab=92.02  E-value=0.09  Score=38.25  Aligned_cols=87  Identities=17%  Similarity=0.099  Sum_probs=45.1

Q ss_pred             cccccHHHHHHHHHHC----CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            3 GTRFIGVFLSRLLVKE----GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         3 atG~iG~~l~~~L~~~----g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      |.|.+|+.+++.|.++    +.+|.++..+........        .....       +..-...+.++++...+|+||.
T Consensus         1 G~G~VG~~l~~~l~~~~~~~~~~v~~v~~~~~~~~~~~--------~~~~~-------~~~~~~~~~~~~~~~~~dvvVE   65 (117)
T PF03447_consen    1 GFGNVGRGLLEQLKEQQERIDLEVVGVADRSMLISKDW--------AASFP-------DEAFTTDLEELIDDPDIDVVVE   65 (117)
T ss_dssp             --SHHHHHHHHHHHHTHHHCEEEEEEEEESSEEEETTH--------HHHHT-------HSCEESSHHHHHTHTT-SEEEE
T ss_pred             CCCHHHHHHHHHHHhCcccCCEEEEEEEECCchhhhhh--------hhhcc-------cccccCCHHHHhcCcCCCEEEE
Confidence            5799999999999887    467777665542111000        00000       1111123445554447999999


Q ss_pred             cCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           79 INGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +++.. .....+.++++..+++|-.|-
T Consensus        66 ~t~~~-~~~~~~~~~L~~G~~VVt~nk   91 (117)
T PF03447_consen   66 CTSSE-AVAEYYEKALERGKHVVTANK   91 (117)
T ss_dssp             -SSCH-HHHHHHHHHHHTTCEEEES-H
T ss_pred             CCCch-HHHHHHHHHHHCCCeEEEECH
Confidence            96542 223345555666678885553

Additionally, several important metabolic intermediates are produced by these reactions, such as diaminopimelic acid, an essential component of bacterial cell wall biosynthesis, and dipicolinic acid, which is involved in sporulation in Gram-positive bacteria. Members of the animal kingdom do not posses this pathway and must therefore acquire these essential amino acids through their diet. Research into improving the metabolic flux through this pathway has the potential to increase the yield of the essential amino acids in important crops, thus improving their nutritional value. Additionally, since the enzymes are not present in animals, inhibitors of them are promising targets for the development of novel antibiotics and herbicides. For more information see []. Homoserine dehydrogenase (1.1.1.3 from EC) catalyses the third step in the aspartate pathway; theNAD(P)-dependent reduction of aspartate beta-semialdehyde into homoserine [, ]. Homoserine is an intermediate in the biosynthesis of threonine, isoleucine, and methionine. The enzyme can be found in a monofunctional form, in some bacteria and yeast, or a bifunctional form consisting of an N-terminal aspartokinase domain and a C-terminal homoserine dehydrogenase domain, as found in bacteria such as Escherichia coli and in plants. Structural analysis of the yeast monofunctional enzyme (P31116 from SWISSPROT) indicates that the enzyme is a dimer composed of three distinct regions; an N-terminal nucleotide-binding domain, a short central dimerisation region, and a C-terminal catalytic domain []. The N-terminal domain forms a modified Rossman fold, while the catalytic domain forms a novel alpha-beta mixed sheet. This entry represents the NAD(P)-binding domain of aspartate and homoserine dehydrogenase. Asparate dehydrogenase (1.4.1.21 from EC) is strictly specific for L-aspartate as substrate and catalyses the first step in NAD biosynthesis from aspartate. The enzyme has a higher affinity for NAD+ than NADP+ []. Note that the C terminus of the protein contributes a helix to this domain that is not covered by this model.; GO: 0016491 oxidoreductase activity, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 3ING_A 3MTJ_A 3DO5_A 3JSA_A 3C8M_A 1J5P_A 1H2H_A 2EJW_E 1TVE_A 1EBU_D ....

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=91.98  E-value=0.57  Score=40.61  Aligned_cols=81  Identities=14%  Similarity=0.119  Sum_probs=52.6

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.+..-|.+|++.+|......               ..+        ...++++++.  .+|+|+.+...
T Consensus       152 G~G~IG~~vA~~~~~fgm~V~~~d~~~~~~~---------------~~~--------~~~~l~ell~--~sDvv~lh~Pl  206 (311)
T PRK08410        152 GLGTIGKRVAKIAQAFGAKVVYYSTSGKNKN---------------EEY--------ERVSLEELLK--TSDIISIHAPL  206 (311)
T ss_pred             CCCHHHHHHHHHHhhcCCEEEEECCCccccc---------------cCc--------eeecHHHHhh--cCCEEEEeCCC
Confidence            5799999999999988999999988532210               111        1235888888  89998866544


Q ss_pred             Ccc----cHHHHHHhCCCCCcEEEEeecee
Q 021331           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (314)
Q Consensus        83 ~~~----~~~~~~~~~~~~~~~i~~Ss~~v  108 (314)
                      +..    --...++.|+....||.+|=..+
T Consensus       207 t~~T~~li~~~~~~~Mk~~a~lIN~aRG~v  236 (311)
T PRK08410        207 NEKTKNLIAYKELKLLKDGAILINVGRGGI  236 (311)
T ss_pred             CchhhcccCHHHHHhCCCCeEEEECCCccc
Confidence            322    12345566665556666554333

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=91.90  E-value=0.16  Score=41.63  Aligned_cols=31  Identities=29%  Similarity=0.343  Sum_probs=27.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      +||+|.+|..++..|.+.|++|++.+|+++.
T Consensus         6 IGG~G~mG~ala~~L~~~G~~V~v~~r~~~~   36 (219)
T TIGR01915         6 LGGTGDQGKGLALRLAKAGNKIIIGSRDLEK   36 (219)
T ss_pred             EcCCCHHHHHHHHHHHhCCCEEEEEEcCHHH
Confidence            3789999999999999999999999988755

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=91.90  E-value=0.3  Score=41.80  Aligned_cols=30  Identities=17%  Similarity=0.314  Sum_probs=27.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~   32 (314)
                      |+|.+|..++..|+..|++|++.+++++..
T Consensus        12 GaG~mG~~iA~~~a~~G~~V~l~d~~~~~~   41 (286)
T PRK07819         12 GAGQMGAGIAEVCARAGVDVLVFETTEELA   41 (286)
T ss_pred             cccHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            459999999999999999999999998764

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=91.88  E-value=0.87  Score=39.38  Aligned_cols=91  Identities=18%  Similarity=0.157  Sum_probs=57.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh---hhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~l~~~~~~~~~d~vi   77 (314)
                      .|++|.+|..+++.+...|.+|++++++.+..... .        +  .++..+ .+..+.   +.+.......++|+|+
T Consensus       146 ~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~-~--------~--~g~~~~-~~~~~~~~~~~i~~~~~~~~~d~v~  213 (324)
T cd08292         146 NAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL-R--------A--LGIGPV-VSTEQPGWQDKVREAAGGAPISVAL  213 (324)
T ss_pred             cccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH-H--------h--cCCCEE-EcCCCchHHHHHHHHhCCCCCcEEE
Confidence            48899999999999999999999988776553211 1        0  122211 123332   2333444334699999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ++.|..  .....++.+....+|+.++.
T Consensus       214 d~~g~~--~~~~~~~~l~~~g~~v~~g~  239 (324)
T cd08292         214 DSVGGK--LAGELLSLLGEGGTLVSFGS  239 (324)
T ss_pred             ECCCCh--hHHHHHHhhcCCcEEEEEec
Confidence            998853  34566677776668887654

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=91.87  E-value=0.75  Score=39.75  Aligned_cols=92  Identities=23%  Similarity=0.149  Sum_probs=59.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChh---hHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~l~~~~~~~~~d~vi   77 (314)
                      +|++|.+|..+++.+...|.+|++++++.+.... +.        +  -++.. ..+..+.+   .+.......++|.++
T Consensus       149 ~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~-~~--------~--~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vl  216 (324)
T cd08244         149 TAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTAL-VR--------A--LGADV-AVDYTRPDWPDQVREALGGGGVTVVL  216 (324)
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH--------H--cCCCE-EEecCCccHHHHHHHHcCCCCceEEE
Confidence            4889999999999999999999999887665321 11        0  11211 12333333   233333334699999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEeec
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      ++.+..  .....++.+....+++.++..
T Consensus       217 ~~~g~~--~~~~~~~~l~~~g~~v~~g~~  243 (324)
T cd08244         217 DGVGGA--IGRAALALLAPGGRFLTYGWA  243 (324)
T ss_pred             ECCChH--hHHHHHHHhccCcEEEEEecC
Confidence            998853  246677777766788877653

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=91.86  E-value=0.35  Score=44.58  Aligned_cols=31  Identities=16%  Similarity=0.429  Sum_probs=27.6

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA   33 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   33 (314)
                      |.|-+|..+++.|+++|++|++.+|++++..
T Consensus        13 GLG~MG~~mA~nL~~~G~~V~V~NRt~~k~~   43 (493)
T PLN02350         13 GLAVMGQNLALNIAEKGFPISVYNRTTSKVD   43 (493)
T ss_pred             eeHHHHHHHHHHHHhCCCeEEEECCCHHHHH
Confidence            5689999999999999999999999877643

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=91.84  E-value=0.28  Score=42.18  Aligned_cols=60  Identities=18%  Similarity=0.285  Sum_probs=40.8

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|..+++.|.+.|++|++.+|++........           .++..       .++..++++  ++|+||-+...
T Consensus         9 G~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~-----------~g~~~-------~~~~~e~~~--~~d~vi~~vp~   68 (296)
T PRK11559          9 GLGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIA-----------AGAET-------ASTAKAVAE--QCDVIITMLPN   68 (296)
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-----------CCCee-------cCCHHHHHh--cCCEEEEeCCC
Confidence            46999999999999999999999988765321110           12211       123445666  89999987654

>PRK10537 voltage-gated potassium channel; Provisional

Probab=91.78  E-value=0.69  Score=41.42  Aligned_cols=66  Identities=17%  Similarity=0.163  Sum_probs=48.8

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|-+|..++++|.++|.+|++++.+...  ...           ..+..++.+|.+|++.++++= -.+++.|+-+...
T Consensus       247 G~g~lg~~v~~~L~~~g~~vvVId~d~~~--~~~-----------~~g~~vI~GD~td~e~L~~Ag-I~~A~aVI~~t~d  312 (393)
T PRK10537        247 GHSPLAINTYLGLRQRGQAVTVIVPLGLE--HRL-----------PDDADLIPGDSSDSAVLKKAG-AARARAILALRDN  312 (393)
T ss_pred             CCChHHHHHHHHHHHCCCCEEEEECchhh--hhc-----------cCCCcEEEeCCCCHHHHHhcC-cccCCEEEEcCCC
Confidence            45889999999999999999988865221  111           256789999999999888753 2368888865543

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=91.76  E-value=0.077  Score=45.44  Aligned_cols=29  Identities=17%  Similarity=0.313  Sum_probs=26.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |+|.+|..++..|...|++|++.+++++.
T Consensus        10 GaG~mG~~iA~~la~~G~~V~l~d~~~~~   38 (287)
T PRK08293         10 GAGVLGSQIAFQTAFHGFDVTIYDISDEA   38 (287)
T ss_pred             CCCHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence            46999999999999999999999998764

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=91.72  E-value=0.44  Score=42.75  Aligned_cols=66  Identities=17%  Similarity=0.048  Sum_probs=49.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |+|.+|..+++.+.+.|++|++++.++........           .  .++..|..|++.+.++.++.++|.|+....
T Consensus        19 G~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~a-----------d--~~~~~~~~d~~~l~~~~~~~~id~vi~~~e   84 (395)
T PRK09288         19 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-----------H--RSHVIDMLDGDALRAVIEREKPDYIVPEIE   84 (395)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhh-----------h--heEECCCCCHHHHHHHHHHhCCCEEEEeeC
Confidence            35789999999999999999999987654221111           1  245678889999999888888999986543

>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein

Probab=91.69  E-value=0.43  Score=42.12  Aligned_cols=60  Identities=17%  Similarity=0.096  Sum_probs=45.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      |+|.+|..+++.+.+.|++|++++.++......+.             -..+.+|+.|++.+.++.+  .+|+|.
T Consensus         6 G~gql~~~l~~aa~~lG~~v~~~d~~~~~p~~~~a-------------d~~~~~~~~d~~~i~~~a~--~~dvit   65 (352)
T TIGR01161         6 GGGQLGRMLALAARPLGIKVHVLDPDANSPAVQVA-------------DHVVLAPFFDPAAIRELAE--SCDVIT   65 (352)
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEECCCCCCChhHhC-------------ceeEeCCCCCHHHHHHHHh--hCCEEE
Confidence            34899999999999999999999887654222221             1234678899999999888  788764

Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=91.64  E-value=1.3  Score=39.68  Aligned_cols=105  Identities=14%  Similarity=0.084  Sum_probs=62.3

Q ss_pred             cccccHHHHHHHHHHCCC-eEEEEEcCCcc---cccCCC-CCC----------chhhhhccCceEE--EEecCCChhhHH
Q 021331            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAP---IAQQLP-GES----------DQEFAEFSSKILH--LKGDRKDYDFVK   65 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~~~~~-~~~----------~~~~~~~~~~~~~--~~~D~~d~~~l~   65 (314)
                      |.|.+|..+++.|...|. ++++++.+.-.   ..+++- ...          .+.+.+..+.+++  +...+ +.+...
T Consensus        49 G~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i-~~~~~~  127 (392)
T PRK07878         49 GAGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEFRL-DPSNAV  127 (392)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEeccC-ChhHHH
Confidence            569999999999999984 78888765422   221111 000          0223333344444  33344 344567


Q ss_pred             HhhhcCCccEEEEcCCCCcccHHHHHHhCC-CCCcEEEEeeceeecc
Q 021331           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK  111 (314)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~  111 (314)
                      ++++  ++|+||.+... ...-..+-++|. ....+|+.+..+.+|.
T Consensus       128 ~~~~--~~D~Vvd~~d~-~~~r~~ln~~~~~~~~p~v~~~~~g~~G~  171 (392)
T PRK07878        128 ELFS--QYDLILDGTDN-FATRYLVNDAAVLAGKPYVWGSIYRFEGQ  171 (392)
T ss_pred             HHHh--cCCEEEECCCC-HHHHHHHHHHHHHcCCCEEEEEeccCEEE
Confidence            7788  89999988653 322223445555 4567888877766653

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=91.61  E-value=0.69  Score=42.79  Aligned_cols=92  Identities=12%  Similarity=0.038  Sum_probs=59.9

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh-------------h---hHHH
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-------------D---FVKS   66 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-------------~---~l~~   66 (314)
                      |.|-+|...+..+...|.+|++++++++......           .-+.+++..|..+.             +   ...+
T Consensus       172 GaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-----------slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        172 GAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-----------SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            5699999999999999999999999876632111           13445444433221             1   1112


Q ss_pred             hhhc--CCccEEEEcCCCCc----cc-HHHHHHhCCCCCcEEEEee
Q 021331           67 SLSA--KGFDVVYDINGREA----DE-VEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        67 ~~~~--~~~d~vi~~a~~~~----~~-~~~~~~~~~~~~~~i~~Ss  105 (314)
                      .+.+  .++|+||.+++...    .. ++..++.++....++.++.
T Consensus       241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~  286 (509)
T PRK09424        241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAA  286 (509)
T ss_pred             HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEcc
Confidence            2221  27999999998632    23 4778888886668888775

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=91.60  E-value=1.5  Score=39.22  Aligned_cols=103  Identities=17%  Similarity=0.127  Sum_probs=57.5

Q ss_pred             cccccHHHHHHHHHHCCC-eEEEEEcCCcc---cccCCC-CC----------CchhhhhccCceEEEE--ecCCChhhHH
Q 021331            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAP---IAQQLP-GE----------SDQEFAEFSSKILHLK--GDRKDYDFVK   65 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~~~~~-~~----------~~~~~~~~~~~~~~~~--~D~~d~~~l~   65 (314)
                      |.|.+|+.+++.|...|. ++++++++.-.   ..++.- ..          ..+.+.+..+.+++..  ..+ +.+.+.
T Consensus       142 G~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~~-~~~~~~  220 (376)
T PRK08762        142 GAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQERV-TSDNVE  220 (376)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEeccC-ChHHHH
Confidence            569999999999999995 78888877321   111110 00          0022222223343322  223 344566


Q ss_pred             HhhhcCCccEEEEcCCCCcccHHHHHHhCC-CCCcEEEEeeceee
Q 021331           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVY  109 (314)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss~~v~  109 (314)
                      ++++  ++|+||++..... .-..+-+.|. ....+|+.+..+.+
T Consensus       221 ~~~~--~~D~Vv~~~d~~~-~r~~ln~~~~~~~ip~i~~~~~g~~  262 (376)
T PRK08762        221 ALLQ--DVDVVVDGADNFP-TRYLLNDACVKLGKPLVYGAVFRFE  262 (376)
T ss_pred             HHHh--CCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEEeccCE
Confidence            7777  8899998876432 1223444455 44577776654433

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=91.60  E-value=0.34  Score=43.20  Aligned_cols=28  Identities=25%  Similarity=0.572  Sum_probs=25.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG   28 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~   28 (314)
                      .||+|.+|..+++.|.+.|++|++.+|+
T Consensus       104 iGG~GlmG~slA~~l~~~G~~V~~~d~~  131 (374)
T PRK11199        104 VGGKGQLGRLFAKMLTLSGYQVRILEQD  131 (374)
T ss_pred             EcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence            3789999999999999999999999985

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=91.56  E-value=0.36  Score=42.43  Aligned_cols=69  Identities=26%  Similarity=0.295  Sum_probs=44.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccc--cCCCCCCchhhhhccCceEEEEecCCChhhHHHhhh--cCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA--QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS--AKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~--~~~~d~v   76 (314)
                      .||+|.+|+++++-+...+..+++.+++.+...  +.+             +. -...|+.+++..++..+  ..++|+|
T Consensus       164 ~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~l-------------GA-d~vvdy~~~~~~e~~kk~~~~~~DvV  229 (347)
T KOG1198|consen  164 LGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKL-------------GA-DEVVDYKDENVVELIKKYTGKGVDVV  229 (347)
T ss_pred             EeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHc-------------CC-cEeecCCCHHHHHHHHhhcCCCccEE
Confidence            489999999999999999943444444444321  111             11 12358878665555554  2369999


Q ss_pred             EEcCCCC
Q 021331           77 YDINGRE   83 (314)
Q Consensus        77 i~~a~~~   83 (314)
                      ++|.|..
T Consensus       230 lD~vg~~  236 (347)
T KOG1198|consen  230 LDCVGGS  236 (347)
T ss_pred             EECCCCC
Confidence            9999875

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=91.55  E-value=0.77  Score=39.78  Aligned_cols=91  Identities=15%  Similarity=0.104  Sum_probs=57.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCC--hhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~l~~~~~~~~~d~vi~   78 (314)
                      .|++|.+|..+++.+...|.+|++++++.++.... .        +  .++..+ .|..+  .+.+... ...++|.|++
T Consensus       153 ~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~--------~--~g~~~v-~~~~~~~~~~~~~~-~~~~~d~vld  219 (326)
T cd08289         153 TGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-K--------K--LGAKEV-IPREELQEESIKPL-EKQRWAGAVD  219 (326)
T ss_pred             EcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-H--------H--cCCCEE-EcchhHHHHHHHhh-ccCCcCEEEE
Confidence            47889999999999999999999998887653211 1        0  122111 22222  2223333 2236999999


Q ss_pred             cCCCCcccHHHHHHhCCCCCcEEEEeec
Q 021331           79 INGREADEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      +.+.  ......++.+....++|.++..
T Consensus       220 ~~g~--~~~~~~~~~l~~~G~~i~~g~~  245 (326)
T cd08289         220 PVGG--KTLAYLLSTLQYGGSVAVSGLT  245 (326)
T ss_pred             CCcH--HHHHHHHHHhhcCCEEEEEeec
Confidence            9874  3455667777766788877653

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=91.51  E-value=0.16  Score=48.45  Aligned_cols=67  Identities=21%  Similarity=0.276  Sum_probs=52.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |.|-+|+.+++.|.++|+++++++.+++......           ..+..++.+|.++++.++++= -.+++.+|-+..
T Consensus       407 G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~-----------~~g~~v~~GDat~~~~L~~ag-i~~A~~vvv~~~  473 (621)
T PRK03562        407 GFGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLR-----------KFGMKVFYGDATRMDLLESAG-AAKAEVLINAID  473 (621)
T ss_pred             ecChHHHHHHHHHHhCCCCEEEEECCHHHHHHHH-----------hcCCeEEEEeCCCHHHHHhcC-CCcCCEEEEEeC
Confidence            5689999999999999999999999887643221           146889999999999887642 236888886654

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=91.45  E-value=0.12  Score=44.19  Aligned_cols=30  Identities=20%  Similarity=0.325  Sum_probs=26.9

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~   32 (314)
                      |.|.+|..++..|++.|++|++.+++++..
T Consensus         8 G~G~mG~~iA~~la~~G~~V~~~d~~~~~~   37 (288)
T PRK09260          8 GAGVMGRGIAYVFAVSGFQTTLVDIKQEQL   37 (288)
T ss_pred             CccHHHHHHHHHHHhCCCcEEEEeCCHHHH
Confidence            459999999999999999999999987664

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=91.38  E-value=0.93  Score=39.01  Aligned_cols=92  Identities=18%  Similarity=0.160  Sum_probs=57.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh---hhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~l~~~~~~~~~d~vi   77 (314)
                      +|++|.+|..+++.+...|.+|++++++....... ..          .++..+ .+....   ..+.......++|.++
T Consensus       151 ~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~----------~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi  218 (328)
T cd08268         151 TAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LA----------LGAAHV-IVTDEEDLVAEVLRITGGKGVDVVF  218 (328)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HH----------cCCCEE-EecCCccHHHHHHHHhCCCCceEEE
Confidence            48899999999999999999999998876543211 10          111111 122222   2233333334699999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEeec
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      ++.+.  ......++.+....+++.++..
T Consensus       219 ~~~~~--~~~~~~~~~l~~~g~~v~~g~~  245 (328)
T cd08268         219 DPVGG--PQFAKLADALAPGGTLVVYGAL  245 (328)
T ss_pred             ECCch--HhHHHHHHhhccCCEEEEEEeC
Confidence            98875  3455667777766688876653

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=91.27  E-value=0.55  Score=40.41  Aligned_cols=30  Identities=27%  Similarity=0.493  Sum_probs=26.9

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~   32 (314)
                      |.|.+|..+++.|++.|++|++.+|+++..
T Consensus         8 GlG~mG~~mA~~l~~~G~~V~v~d~~~~~~   37 (296)
T PRK15461          8 GLGQMGSPMASNLLKQGHQLQVFDVNPQAV   37 (296)
T ss_pred             eeCHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence            579999999999999999999999987663

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=91.24  E-value=0.51  Score=41.21  Aligned_cols=93  Identities=18%  Similarity=0.219  Sum_probs=50.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |+|-+|..++..|.+.|++|++.+|+++...........  . ....+... ...+...++..++++  ++|+||-+...
T Consensus        11 G~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~--~-~~~~g~~~-~~~~~~~~~~~e~~~--~aD~Vi~~v~~   84 (328)
T PRK14618         11 GAGAWGTALAVLAASKGVPVRLWARRPEFAAALAAEREN--R-EYLPGVAL-PAELYPTADPEEALA--GADFAVVAVPS   84 (328)
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcc--c-ccCCCCcC-CCCeEEeCCHHHHHc--CCCEEEEECch
Confidence            569999999999999999999999976542111100000  0 00001100 000111123445555  78999877654


Q ss_pred             CcccHHHHHHhCCCCCcEEEE
Q 021331           83 EADEVEPILDALPNLEQFIYC  103 (314)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~i~~  103 (314)
                      .  .+..+++.+.....+|.+
T Consensus        85 ~--~~~~v~~~l~~~~~vi~~  103 (328)
T PRK14618         85 K--ALRETLAGLPRALGYVSC  103 (328)
T ss_pred             H--HHHHHHHhcCcCCEEEEE
Confidence            4  356666666533333433

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.23  E-value=0.43  Score=40.64  Aligned_cols=27  Identities=19%  Similarity=0.391  Sum_probs=23.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR   27 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r   27 (314)
                      .|++|.+|++++..|+++|.+|+++.|
T Consensus       165 iG~gg~vGkpia~~L~~~gatVtv~~~  191 (283)
T PRK14192        165 VGRSAILGKPMAMMLLNANATVTICHS  191 (283)
T ss_pred             ECCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence            477788999999999999988888776

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=91.21  E-value=1.5  Score=39.01  Aligned_cols=104  Identities=19%  Similarity=0.197  Sum_probs=61.6

Q ss_pred             cccccHHHHHHHHHHCC-CeEEEEEcCCcc---cccCCC-CCC----------chhhhhccCceE--EEEecCCChhhHH
Q 021331            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAP---IAQQLP-GES----------DQEFAEFSSKIL--HLKGDRKDYDFVK   65 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~~---~~~~~~-~~~----------~~~~~~~~~~~~--~~~~D~~d~~~l~   65 (314)
                      |.|.+|..+++.|...| .++++++.+.-.   ..+++. ...          .+++.+..+.++  .+...+ +++.+.
T Consensus        48 G~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i-~~~~~~  126 (370)
T PRK05600         48 GAGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRERL-TAENAV  126 (370)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeeeec-CHHHHH
Confidence            56999999999999999 588888876422   222211 000          022223334433  333344 455677


Q ss_pred             HhhhcCCccEEEEcCCCCcccHHHHHHhCC-CCCcEEEEeeceeec
Q 021331           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (314)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss~~v~~  110 (314)
                      ++++  ++|+||.+... ...-..+-++|. ....+|+.+..+.+|
T Consensus       127 ~~~~--~~DlVid~~Dn-~~~r~~in~~~~~~~iP~v~~~~~g~~G  169 (370)
T PRK05600        127 ELLN--GVDLVLDGSDS-FATKFLVADAAEITGTPLVWGTVLRFHG  169 (370)
T ss_pred             HHHh--CCCEEEECCCC-HHHHHHHHHHHHHcCCCEEEEEEecCEE
Confidence            7888  89999988764 222223334455 445788877655544

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=91.15  E-value=0.86  Score=39.06  Aligned_cols=92  Identities=18%  Similarity=0.181  Sum_probs=55.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChh---hHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~l~~~~~~~~~d~vi   77 (314)
                      +|++|.+|..+++.+...|.+|++++++...... +.        +  .++.. ..+..+.+   .+.......++|.++
T Consensus       146 ~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~-~~--------~--~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (323)
T cd05276         146 HGGASGVGTAAIQLAKALGARVIATAGSEEKLEA-CR--------A--LGADV-AINYRTEDFAEEVKEATGGRGVDVIL  213 (323)
T ss_pred             EcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHH-HH--------H--cCCCE-EEeCCchhHHHHHHHHhCCCCeEEEE
Confidence            4889999999999999999999998887554221 11        0  11111 23333332   233333323699999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEeec
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      ++++...  ....++.+....+++.++..
T Consensus       214 ~~~g~~~--~~~~~~~~~~~g~~i~~~~~  240 (323)
T cd05276         214 DMVGGDY--LARNLRALAPDGRLVLIGLL  240 (323)
T ss_pred             ECCchHH--HHHHHHhhccCCEEEEEecC
Confidence            9988432  44455555555577766543

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=91.14  E-value=0.28  Score=32.87  Aligned_cols=29  Identities=38%  Similarity=0.581  Sum_probs=26.8

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |+|++|-.++..|.+.|.+|+++.|++..
T Consensus         6 GgG~ig~E~A~~l~~~g~~vtli~~~~~~   34 (80)
T PF00070_consen    6 GGGFIGIELAEALAELGKEVTLIERSDRL   34 (80)
T ss_dssp             SSSHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred             CcCHHHHHHHHHHHHhCcEEEEEeccchh
Confidence            56999999999999999999999998766

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=91.03  E-value=0.43  Score=35.28  Aligned_cols=90  Identities=20%  Similarity=0.252  Sum_probs=50.1

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcc--cccCCCCCCchhhhhccCceEEEEecC------------------
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP--IAQQLPGESDQEFAEFSSKILHLKGDR------------------   58 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~------------------   58 (314)
                      .|+||.||....+.+.+.+  ++|++++-....  ..+.        ..++.++.-.+ .|-                  
T Consensus         4 LGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q--------~~~f~p~~v~i-~~~~~~~~l~~~~~~~~~~~~   74 (129)
T PF02670_consen    4 LGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQ--------AREFKPKYVVI-ADEEAYEELKKALPSKGPGIE   74 (129)
T ss_dssp             ESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHH--------HHHHT-SEEEE-SSHHHHHHHHHHHHHTTSSSE
T ss_pred             EcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHH--------HHHhCCCEEEE-cCHHHHHHHHHHhhhcCCCCE
Confidence            4999999999999999886  899998754332  1110        11111222111 111                  


Q ss_pred             --CChhhHHHhhhcCCccEEEEcCCCCcccHHHHHHhCCCCCcE
Q 021331           59 --KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQF  100 (314)
Q Consensus        59 --~d~~~l~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~  100 (314)
                        ..++.+.++....++|+|++... ...+....+.+++..+++
T Consensus        75 v~~G~~~l~~~~~~~~~D~vv~Ai~-G~aGL~pt~~Ai~~gk~i  117 (129)
T PF02670_consen   75 VLSGPEGLEELAEEPEVDIVVNAIV-GFAGLKPTLAAIKAGKDI  117 (129)
T ss_dssp             EEESHHHHHHHHTHTT-SEEEE--S-SGGGHHHHHHHHHTTSEE
T ss_pred             EEeChHHHHHHhcCCCCCEEEEeCc-ccchHHHHHHHHHCCCeE
Confidence              12455666665567888887643 355666666666643443

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=91.03  E-value=0.24  Score=43.23  Aligned_cols=69  Identities=16%  Similarity=0.208  Sum_probs=54.6

Q ss_pred             cccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChh-hHHHhhhcCCccEEEEcC
Q 021331            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD-FVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-~l~~~~~~~~~d~vi~~a   80 (314)
                      |+||+...+++.|.+++ .+|++.+|..........          +.+++.+..|+.+++ .++...+  ..|.++.+.
T Consensus         9 gsg~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~----------~~~~~av~ldv~~~~~~L~~~v~--~~D~viSLl   76 (445)
T KOG0172|consen    9 GSGFVSRPVADFLSRKKDVNVTVASRTLKDAEALVK----------GINIKAVSLDVADEELALRKEVK--PLDLVISLL   76 (445)
T ss_pred             cCccccchHHHHHhhcCCceEEEehhhHHHHHHHhc----------CCCccceEEEccchHHHHHhhhc--ccceeeeec
Confidence            67999999999999886 688888887766443333          245888999999988 8888888  899999876


Q ss_pred             CCC
Q 021331           81 GRE   83 (314)
Q Consensus        81 ~~~   83 (314)
                      ..+
T Consensus        77 P~t   79 (445)
T KOG0172|consen   77 PYT   79 (445)
T ss_pred             cch
Confidence            653

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=91.00  E-value=2  Score=37.15  Aligned_cols=106  Identities=18%  Similarity=0.238  Sum_probs=63.3

Q ss_pred             cccccHHHHHHHHHHCC-CeEEEEEcCCccc---ccCCC-CCC----------chhhhhccCc--eEEEEecCCChhhHH
Q 021331            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPI---AQQLP-GES----------DQEFAEFSSK--ILHLKGDRKDYDFVK   65 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~~~---~~~~~-~~~----------~~~~~~~~~~--~~~~~~D~~d~~~l~   65 (314)
                      |.|.+|..+++.|...| -++++++.+.-..   .+++. ...          .+.+.+..+.  +..+..++.+.....
T Consensus         6 GaGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~~~~~~   85 (312)
T cd01489           6 GAGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKDPDFNV   85 (312)
T ss_pred             CCCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCCccchH
Confidence            56999999999999999 5788888665331   11111 000          0222222233  444455665543345


Q ss_pred             HhhhcCCccEEEEcCCCCcccHHHHHHhCC-CCCcEEEEeeceeecc
Q 021331           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK  111 (314)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~  111 (314)
                      +.++  ++|+||.+.. +...-..+-+.|. ....+|..++.+.+|.
T Consensus        86 ~f~~--~~DvVv~a~D-n~~ar~~in~~c~~~~ip~I~~gt~G~~G~  129 (312)
T cd01489          86 EFFK--QFDLVFNALD-NLAARRHVNKMCLAADVPLIESGTTGFLGQ  129 (312)
T ss_pred             HHHh--cCCEEEECCC-CHHHHHHHHHHHHHCCCCEEEEecCcceeE
Confidence            6777  8999998875 3443334555565 4567888777766653

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=90.96  E-value=2.3  Score=36.87  Aligned_cols=66  Identities=14%  Similarity=0.041  Sum_probs=43.4

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |-|.+|+++++.|...|++|++.+|...... ...          ..++..        .++.++++  .+|+|+.+...
T Consensus        23 G~GsIG~amA~nL~d~G~~ViV~~r~~~s~~-~A~----------~~G~~v--------~sl~Eaak--~ADVV~llLPd   81 (335)
T PRK13403         23 GYGSQGHAQAQNLRDSGVEVVVGVRPGKSFE-VAK----------ADGFEV--------MSVSEAVR--TAQVVQMLLPD   81 (335)
T ss_pred             eEcHHHHHHHHHHHHCcCEEEEEECcchhhH-HHH----------HcCCEE--------CCHHHHHh--cCCEEEEeCCC
Confidence            5699999999999999999998876532211 000          023321        14778888  89999987764


Q ss_pred             CcccHHHHH
Q 021331           83 EADEVEPIL   91 (314)
Q Consensus        83 ~~~~~~~~~   91 (314)
                        ..+..++
T Consensus        82 --~~t~~V~   88 (335)
T PRK13403         82 --EQQAHVY   88 (335)
T ss_pred             --hHHHHHH
Confidence              2334444

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=90.95  E-value=0.89  Score=39.56  Aligned_cols=80  Identities=13%  Similarity=0.058  Sum_probs=50.4

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|-||+.+++.|..-|.+|++.++-........                   -...-.+++++++.  +.|+|+.....
T Consensus       149 G~G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~-------------------~~~~~~~~Ld~lL~--~sDiv~lh~Pl  207 (324)
T COG0111         149 GLGRIGRAVAKRLKAFGMKVIGYDPYSPRERAGV-------------------DGVVGVDSLDELLA--EADILTLHLPL  207 (324)
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEECCCCchhhhcc-------------------ccceecccHHHHHh--hCCEEEEcCCC
Confidence            5799999999999999999999998433311000                   01123456888888  89998866654


Q ss_pred             CcccHHHHH-----HhCCCCCcEEEEe
Q 021331           83 EADEVEPIL-----DALPNLEQFIYCS  104 (314)
Q Consensus        83 ~~~~~~~~~-----~~~~~~~~~i~~S  104 (314)
                      +.. |+.++     ..|+....||.+|
T Consensus       208 T~e-T~g~i~~~~~a~MK~gailIN~a  233 (324)
T COG0111         208 TPE-TRGLINAEELAKMKPGAILINAA  233 (324)
T ss_pred             Ccc-hhcccCHHHHhhCCCCeEEEECC
Confidence            332 44443     3354333455443

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=90.91  E-value=0.31  Score=42.87  Aligned_cols=78  Identities=19%  Similarity=0.279  Sum_probs=46.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCC---chhhhhcc-CceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES---DQEFAEFS-SKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      |+||+|.-.+.-|.+.||+|++++.++++........+   ...++++. .+..-  +-+.-..+.+++++  +.|++|-
T Consensus         7 GtGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~--gRl~fTtd~~~a~~--~adv~fI   82 (414)
T COG1004           7 GTGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLAS--GRLRFTTDYEEAVK--DADVVFI   82 (414)
T ss_pred             CCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhcccc--CcEEEEcCHHHHHh--cCCEEEE
Confidence            78999999999999999999999988876421111100   01111110 01100  00111223456666  8999998


Q ss_pred             cCCCCc
Q 021331           79 INGREA   84 (314)
Q Consensus        79 ~a~~~~   84 (314)
                      +.|...
T Consensus        83 avgTP~   88 (414)
T COG1004          83 AVGTPP   88 (414)
T ss_pred             EcCCCC
Confidence            887643

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=90.91  E-value=3  Score=34.41  Aligned_cols=101  Identities=13%  Similarity=0.085  Sum_probs=57.2

Q ss_pred             cccccHHHHHHHHHHCC-CeEEEEEcCCc---ccccCCCC---C--------CchhhhhccCceEEEEec-CCChhhHHH
Q 021331            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKA---PIAQQLPG---E--------SDQEFAEFSSKILHLKGD-RKDYDFVKS   66 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~---~~~~~~~~---~--------~~~~~~~~~~~~~~~~~D-~~d~~~l~~   66 (314)
                      |.|.+|+.+++.|...| .++++++.+.-   +...++..   .        ..+++.+..+.+++...+ ..+++.+..
T Consensus        18 G~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~~i~~~~~~~   97 (231)
T cd00755          18 GLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEEFLTPDNSED   97 (231)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeeeecCHhHHHH
Confidence            56999999999999999 47888886542   22222111   0        012333333444443332 223455555


Q ss_pred             hhhcCCccEEEEcCCCCcccHHHHHHhCC-CCCcEEEEee
Q 021331           67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSS  105 (314)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss  105 (314)
                      ++. .++|+||.+... ...-..+.+.|. ....||...+
T Consensus        98 l~~-~~~D~VvdaiD~-~~~k~~L~~~c~~~~ip~I~s~g  135 (231)
T cd00755          98 LLG-GDPDFVVDAIDS-IRAKVALIAYCRKRKIPVISSMG  135 (231)
T ss_pred             Hhc-CCCCEEEEcCCC-HHHHHHHHHHHHHhCCCEEEEeC
Confidence            553 269999998764 333345667776 4446665433

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit

Probab=90.80  E-value=1.2  Score=40.77  Aligned_cols=69  Identities=12%  Similarity=-0.035  Sum_probs=46.7

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEE-------ecCCChhhHHHhhhcCCccE
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK-------GDRKDYDFVKSSLSAKGFDV   75 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~D~~d~~~l~~~~~~~~~d~   75 (314)
                      +.|.++..+++.+.+.|++|++++..+.........          .. +++.       -++.|.+.+.++..+.++|+
T Consensus         9 g~g~~~~~~~~aa~~lG~~vv~~~~~~d~~a~~~~~----------aD-~~~~~~~~~~~~~y~d~~~l~~~a~~~~id~   77 (449)
T TIGR00514         9 NRGEIALRILRACKELGIKTVAVHSTADRDALHVLL----------AD-EAVCIGPAPSAKSYLNIPNIISAAEITGADA   77 (449)
T ss_pred             CCCHHHHHHHHHHHHcCCeEEEEEChhhhccccccc----------CC-EEEEcCCCCchhchhCHHHHHHHHHHhCCCE
Confidence            468999999999999999999997643321111110          11 1122       15667777888888789999


Q ss_pred             EEEcCCC
Q 021331           76 VYDINGR   82 (314)
Q Consensus        76 vi~~a~~   82 (314)
                      |+-..+.
T Consensus        78 I~pg~g~   84 (449)
T TIGR00514        78 IHPGYGF   84 (449)
T ss_pred             EEeCCCc
Confidence            9977654

This model represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase is designated EC 6.4.1.2 and this component, biotin carboxylase, has its own designation, EC 6.3.4.14. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase), but seed members and trusted cutoff are selected so as to exclude these. In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=90.79  E-value=0.8  Score=40.36  Aligned_cols=91  Identities=14%  Similarity=0.157  Sum_probs=55.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh----hhHHHhhhcCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY----DFVKSSLSAKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~----~~l~~~~~~~~~d~v   76 (314)
                      +||+|.+|..+++.+...|.+|++++++.++......        +  .++..+ .|..+.    +.+.+... .++|++
T Consensus       165 ~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~--------~--lGa~~v-i~~~~~~~~~~~i~~~~~-~gvD~v  232 (348)
T PLN03154        165 SAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN--------K--LGFDEA-FNYKEEPDLDAALKRYFP-EGIDIY  232 (348)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH--------h--cCCCEE-EECCCcccHHHHHHHHCC-CCcEEE
Confidence            4889999999999999999999988877655321100        0  122221 233322    22222222 369999


Q ss_pred             EEcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        77 i~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +++.|.  ......++.++...+++.++.
T Consensus       233 ~d~vG~--~~~~~~~~~l~~~G~iv~~G~  259 (348)
T PLN03154        233 FDNVGG--DMLDAALLNMKIHGRIAVCGM  259 (348)
T ss_pred             EECCCH--HHHHHHHHHhccCCEEEEECc
Confidence            999884  345566777775567876553

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=90.77  E-value=0.56  Score=40.49  Aligned_cols=91  Identities=12%  Similarity=0.124  Sum_probs=47.5

Q ss_pred             CCcccccHHHHHHHHHHCCC--e-EEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGH--Q-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      .||||-+|+.+++.|.++..  . +.++...++.-..               ...|..-.+.-++...+.....++|++|
T Consensus         7 vGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~---------------~~~f~~~~~~v~~~~~~~~~~~~~Divf   71 (334)
T COG0136           7 LGATGAVGQVLLELLEERHFPFEELVLLASARSAGKK---------------YIEFGGKSIGVPEDAADEFVFSDVDIVF   71 (334)
T ss_pred             EeccchHHHHHHHHHHhcCCCcceEEEEecccccCCc---------------cccccCccccCccccccccccccCCEEE
Confidence            49999999999999999753  2 4444433333111               1222211122222222222222799999


Q ss_pred             EcCCCCcccHHHHHHhCC-CCCcEEEEeeceeec
Q 021331           78 DINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss~~v~~  110 (314)
                      .++|-...  +.+...+. ...  +.++..+.|-
T Consensus        72 ~~ag~~~s--~~~~p~~~~~G~--~VIdnsSa~R  101 (334)
T COG0136          72 FAAGGSVS--KEVEPKAAEAGC--VVIDNSSAFR  101 (334)
T ss_pred             EeCchHHH--HHHHHHHHHcCC--EEEeCCcccc
Confidence            99985443  44444444 222  4444444443

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=90.75  E-value=0.14  Score=41.45  Aligned_cols=72  Identities=19%  Similarity=0.167  Sum_probs=44.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCccc-ccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      +||+||+|.+++..+...||+|+-.+|+.... ...+.+..+       -.++....+-.|+.....+++  +...++|.
T Consensus         8 fgg~gflg~~ic~~a~~sgy~vvsvsrsgas~~snkid~~~d-------ve~e~tlvlggnpfsgs~vlk--~A~~vv~s   78 (283)
T KOG4288|consen    8 FGGNGFLGKRICQEAVTSGYQVVSVSRSGASPHSNKIDDKQD-------VEVEWTLVLGGNPFSGSEVLK--NATNVVHS   78 (283)
T ss_pred             ecccccchhhhhHHHHhcCceEEEeccccCCCcCCCCcchhh-------hhHHHHhhhcCCCcchHHHHH--HHHhhcee
Confidence            58999999999999999999999998876542 222221110       112223334456665666665  44445554


Q ss_pred             CC
Q 021331           80 NG   81 (314)
Q Consensus        80 a~   81 (314)
                      .+
T Consensus        79 vg   80 (283)
T KOG4288|consen   79 VG   80 (283)
T ss_pred             ee
Confidence            44

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.65  E-value=0.64  Score=39.75  Aligned_cols=28  Identities=21%  Similarity=0.400  Sum_probs=24.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG   28 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~   28 (314)
                      .|.+|.+|..++..|+++|++|++..+.
T Consensus       165 IG~s~ivG~PmA~~L~~~gatVtv~~~~  192 (301)
T PRK14194        165 IGRSNIVGKPMAALLLQAHCSVTVVHSR  192 (301)
T ss_pred             ECCCCccHHHHHHHHHHCCCEEEEECCC
Confidence            3777899999999999999999998654

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=90.64  E-value=1.3  Score=34.00  Aligned_cols=66  Identities=20%  Similarity=0.285  Sum_probs=44.3

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCC--C-h----hhHHHhhhcCCcc
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--D-Y----DFVKSSLSAKGFD   74 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--d-~----~~l~~~~~~~~~d   74 (314)
                      ||-|-+|+++++.+..++|-|.-++.......               ..-.++..|-.  + +    +.+.+.+...++|
T Consensus        10 GGkGALGSacv~~FkannywV~siDl~eNe~A---------------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvD   74 (236)
T KOG4022|consen   10 GGKGALGSACVEFFKANNYWVLSIDLSENEQA---------------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVD   74 (236)
T ss_pred             cCcchHhHHHHHHHHhcCeEEEEEeecccccc---------------cceEEecCCcchhHHHHHHHHHHHHhhcccccc
Confidence            88999999999999999998888887654421               11222333222  1 1    2344555566899


Q ss_pred             EEEEcCCC
Q 021331           75 VVYDINGR   82 (314)
Q Consensus        75 ~vi~~a~~   82 (314)
                      .||..||-
T Consensus        75 av~CVAGG   82 (236)
T KOG4022|consen   75 AVFCVAGG   82 (236)
T ss_pred             eEEEeecc
Confidence            99988775

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=90.61  E-value=0.35  Score=44.85  Aligned_cols=30  Identities=20%  Similarity=0.211  Sum_probs=27.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~   32 (314)
                      |+|.+|..++..|++.|++|++.+++++..
T Consensus        11 G~G~MG~~iA~~la~~G~~V~v~D~~~~~~   40 (495)
T PRK07531         11 GGGVIGGGWAARFLLAGIDVAVFDPHPEAE   40 (495)
T ss_pred             CcCHHHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence            579999999999999999999999987663

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=90.61  E-value=0.62  Score=40.26  Aligned_cols=72  Identities=21%  Similarity=0.149  Sum_probs=43.5

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      +|++|.+|++++-.|..++  .+++.++.+  .......     .+.+......+....  ..+++.+.++  ++|+||-
T Consensus         6 IGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~al-----DL~~~~~~~~i~~~~--~~~~~y~~~~--daDivvi   74 (310)
T cd01337           6 LGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAA-----DLSHINTPAKVTGYL--GPEELKKALK--GADVVVI   74 (310)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeeh-----HhHhCCCcceEEEec--CCCchHHhcC--CCCEEEE
Confidence            4888999999999998887  589999887  2111111     111111111222110  1122445667  9999999


Q ss_pred             cCCCC
Q 021331           79 INGRE   83 (314)
Q Consensus        79 ~a~~~   83 (314)
                      +||..
T Consensus        75 taG~~   79 (310)
T cd01337          75 PAGVP   79 (310)
T ss_pred             eCCCC
Confidence            99873

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=90.61  E-value=0.57  Score=40.37  Aligned_cols=30  Identities=27%  Similarity=0.492  Sum_probs=26.9

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~   32 (314)
                      |.|.+|..+++.|++.|++|++.+|+++..
T Consensus         7 GlG~MG~~mA~~L~~~g~~v~v~dr~~~~~   36 (301)
T PRK09599          7 GLGRMGGNMARRLLRGGHEVVGYDRNPEAV   36 (301)
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            579999999999999999999999987653

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=90.55  E-value=0.98  Score=39.72  Aligned_cols=29  Identities=21%  Similarity=0.384  Sum_probs=23.9

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCC
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGK   29 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~   29 (314)
                      +|++|++|.+|++.|.+.+ .+|+.+..+.
T Consensus         6 vGatG~~G~~L~~~l~~~~~~~l~~v~~~~   35 (341)
T TIGR00978         6 LGATGLVGQKFVKLLAKHPYFELAKVVASP   35 (341)
T ss_pred             ECCCCHHHHHHHHHHHhCCCceEEEEEECh
Confidence            5999999999999998876 5888875443

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=90.51  E-value=0.27  Score=41.48  Aligned_cols=73  Identities=14%  Similarity=0.089  Sum_probs=44.3

Q ss_pred             CCcccccHHHHHHHHHHCC----CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~v   76 (314)
                      +||+|.+|..++..|+..|    .+|+.++++++.......     .+.+.....  ....+.-..++.+.++  ++|+|
T Consensus         4 IGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~-----dl~~~~~~~--~~~~i~~~~d~~~~~~--~aDiV   74 (263)
T cd00650           4 IGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAM-----DLQDAVEPL--ADIKVSITDDPYEAFK--DADVV   74 (263)
T ss_pred             ECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHH-----HHHHhhhhc--cCcEEEECCchHHHhC--CCCEE
Confidence            4888999999999999988    799999987755322111     111111110  0111111122456666  89999


Q ss_pred             EEcCCC
Q 021331           77 YDINGR   82 (314)
Q Consensus        77 i~~a~~   82 (314)
                      |.+++.
T Consensus        75 v~t~~~   80 (263)
T cd00650          75 IITAGV   80 (263)
T ss_pred             EECCCC
Confidence            998775

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=90.49  E-value=0.92  Score=39.36  Aligned_cols=93  Identities=19%  Similarity=0.152  Sum_probs=58.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh---hhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~l~~~~~~~~~d~vi   77 (314)
                      .|++|.+|..+++.+...|.+|++++++.+.... +.        +  -++..+ .+..+.   +.+..... .++|.++
T Consensus       146 ~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~-~~--------~--~g~~~v-~~~~~~~~~~~~~~~~~-~~vd~v~  212 (329)
T cd08250         146 TAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEF-LK--------S--LGCDRP-INYKTEDLGEVLKKEYP-KGVDVVY  212 (329)
T ss_pred             EeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHH-HH--------H--cCCceE-EeCCCccHHHHHHHhcC-CCCeEEE
Confidence            3889999999999999999999998887654221 11        0  111111 222222   22222222 3689999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEeecee
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSSAGV  108 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~~v  108 (314)
                      ++.+.  .......+.+....++|.+++...
T Consensus       213 ~~~g~--~~~~~~~~~l~~~g~~v~~g~~~~  241 (329)
T cd08250         213 ESVGG--EMFDTCVDNLALKGRLIVIGFISG  241 (329)
T ss_pred             ECCcH--HHHHHHHHHhccCCeEEEEecccC
Confidence            98873  445566777776678898876543

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=90.45  E-value=1  Score=37.56  Aligned_cols=93  Identities=20%  Similarity=0.262  Sum_probs=56.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHH--hhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS--SLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~--~~~~~~~d~vi~   78 (314)
                      +|++| +|..+++.+...|.+|++++++...... +.        +  .+... ..|..+.+....  .....++|++++
T Consensus       141 ~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~-~~--------~--~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~  207 (271)
T cd05188         141 LGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLEL-AK--------E--LGADH-VIDYKEEDLEEELRLTGGGGADVVID  207 (271)
T ss_pred             ECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHH-HH--------H--hCCce-eccCCcCCHHHHHHHhcCCCCCEEEE
Confidence            47777 9999999999999999999887654221 11        0  11111 123333322222  222236999999


Q ss_pred             cCCCCcccHHHHHHhCCCCCcEEEEeece
Q 021331           79 INGREADEVEPILDALPNLEQFIYCSSAG  107 (314)
Q Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~i~~Ss~~  107 (314)
                      +++.. ......++.+....+++.++...
T Consensus       208 ~~~~~-~~~~~~~~~l~~~G~~v~~~~~~  235 (271)
T cd05188         208 AVGGP-ETLAQALRLLRPGGRIVVVGGTS  235 (271)
T ss_pred             CCCCH-HHHHHHHHhcccCCEEEEEccCC
Confidence            98742 33455666677666888777643

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>TIGR00877 purD phosphoribosylamine--glycine ligase

Probab=90.39  E-value=0.68  Score=42.04  Aligned_cols=65  Identities=12%  Similarity=-0.031  Sum_probs=44.4

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      |+|..|.++++.+.+.|+.+.++...........            ....++..|..|.+.+.++.++.++|.||-.
T Consensus         7 G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~d~~~l~~~~~~~~id~vi~~   71 (423)
T TIGR00877         7 GNGGREHALAWKLAQSPLVKYVYVAPGNAGTARL------------AKNKNVAISITDIEALVEFAKKKKIDLAVIG   71 (423)
T ss_pred             CCChHHHHHHHHHHhCCCccEEEEECCCHHHhhh------------cccccccCCCCCHHHHHHHHHHhCCCEEEEC
Confidence            4577799999999998866555543332211111            1223455789999999999988899999854

This enzyme appears as a monofunctional protein in prokaryotes but as part of a larger, multidomain protein in eukaryotes.

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=90.36  E-value=0.14  Score=39.54  Aligned_cols=85  Identities=21%  Similarity=0.296  Sum_probs=46.9

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |+|..|.+++..|.++|++|+..+|+++...........   ..+..+...-. .+.-..+++++++  +.|+||-+.. 
T Consensus         6 GaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n---~~~~~~~~l~~-~i~~t~dl~~a~~--~ad~IiiavP-   78 (157)
T PF01210_consen    6 GAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQN---PKYLPGIKLPE-NIKATTDLEEALE--DADIIIIAVP-   78 (157)
T ss_dssp             SSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSE---TTTSTTSBEET-TEEEESSHHHHHT--T-SEEEE-S--
T ss_pred             CcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCC---CCCCCCcccCc-ccccccCHHHHhC--cccEEEeccc-
Confidence            569999999999999999999999986432100000000   00001111110 1111234667887  8999986654 


Q ss_pred             CcccHHHHHHhCC
Q 021331           83 EADEVEPILDALP   95 (314)
Q Consensus        83 ~~~~~~~~~~~~~   95 (314)
                       ....+.+++.+.
T Consensus        79 -s~~~~~~~~~l~   90 (157)
T PF01210_consen   79 -SQAHREVLEQLA   90 (157)
T ss_dssp             -GGGHHHHHHHHT
T ss_pred             -HHHHHHHHHHHh
Confidence             444566666655

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=90.28  E-value=0.89  Score=39.36  Aligned_cols=72  Identities=21%  Similarity=0.188  Sum_probs=43.8

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      +|++|.+|.+++-.|...+  .+++.+++++ . .....     .+.+......+....  +.+++.+.++  +.|+||-
T Consensus         5 iGaaG~VG~~~a~~l~~~~~~~elvL~Di~~-a-~g~a~-----DL~~~~~~~~i~~~~--~~~~~~~~~~--daDivvi   73 (312)
T TIGR01772         5 LGAAGGIGQPLSLLLKLQPYVSELSLYDIAG-A-AGVAA-----DLSHIPTAASVKGFS--GEEGLENALK--GADVVVI   73 (312)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCcEEEEecCCC-C-cEEEc-----hhhcCCcCceEEEec--CCCchHHHcC--CCCEEEE
Confidence            5888999999999998887  4789898876 2 11111     111111112222111  1122446677  9999999


Q ss_pred             cCCCC
Q 021331           79 INGRE   83 (314)
Q Consensus        79 ~a~~~   83 (314)
                      ++|..
T Consensus        74 taG~~   78 (312)
T TIGR01772        74 PAGVP   78 (312)
T ss_pred             eCCCC
Confidence            99873

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=90.28  E-value=0.59  Score=40.26  Aligned_cols=29  Identities=21%  Similarity=0.350  Sum_probs=26.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |.|.+|.++++.|.+.|++|++.+|+++.
T Consensus         7 GlG~mG~~mA~~L~~~g~~v~v~dr~~~~   35 (299)
T PRK12490          7 GLGKMGGNMAERLREDGHEVVGYDVNQEA   35 (299)
T ss_pred             cccHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            46999999999999999999999988765

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=90.28  E-value=0.26  Score=42.74  Aligned_cols=29  Identities=24%  Similarity=0.375  Sum_probs=26.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |+|.+|..++..|++.|++|++++++.+.
T Consensus        11 GaG~mG~~iA~~l~~~g~~V~~~d~~~~~   39 (311)
T PRK06130         11 GAGTMGSGIAALFARKGLQVVLIDVMEGA   39 (311)
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            56999999999999999999999987755

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=90.22  E-value=0.89  Score=39.08  Aligned_cols=75  Identities=13%  Similarity=0.063  Sum_probs=45.9

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      .||||+.|..|++.|.... .++..++.+...                         +..+   ..++++  ++|++|.+
T Consensus         7 vGasGy~G~el~rlL~~HP~~el~~l~s~~~~-------------------------~~~~---~~~~~~--~~D~vFla   56 (310)
T TIGR01851         7 DGEAGTTGLQIRERLSGRDDIELLSIAPDRRK-------------------------DAAE---RAKLLN--AADVAILC   56 (310)
T ss_pred             ECCCChhHHHHHHHHhCCCCeEEEEEeccccc-------------------------CcCC---HhHhhc--CCCEEEEC
Confidence            4999999999999999985 455555433210                         1112   334555  79999988


Q ss_pred             CCCCcccHHHHHHhC-CCCCcEEEEeece
Q 021331           80 NGREADEVEPILDAL-PNLEQFIYCSSAG  107 (314)
Q Consensus        80 a~~~~~~~~~~~~~~-~~~~~~i~~Ss~~  107 (314)
                      .+..  ....++..+ ....++|=.|++.
T Consensus        57 lp~~--~s~~~~~~~~~~g~~VIDlSadf   83 (310)
T TIGR01851        57 LPDD--AAREAVSLVDNPNTCIIDASTAY   83 (310)
T ss_pred             CCHH--HHHHHHHHHHhCCCEEEECChHH
Confidence            7543  233344443 2344677777654

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=90.22  E-value=0.3  Score=43.73  Aligned_cols=29  Identities=21%  Similarity=0.391  Sum_probs=24.8

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~   32 (314)
                      |+|++|..++..|. .||+|+++++++++.
T Consensus         7 GlGyvGl~~A~~lA-~G~~VigvD~d~~kv   35 (388)
T PRK15057          7 GTGYVGLSNGLLIA-QNHEVVALDILPSRV   35 (388)
T ss_pred             CCCHHHHHHHHHHH-hCCcEEEEECCHHHH
Confidence            67999999996665 599999999998764

>PRK06849 hypothetical protein; Provisional

Probab=90.22  E-value=0.8  Score=41.07  Aligned_cols=72  Identities=19%  Similarity=0.200  Sum_probs=46.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh----hhHHHhhhcCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY----DFVKSSLSAKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~----~~l~~~~~~~~~d~v   76 (314)
                      ||++..+|..+++.|.+.|++|++++..+........         .......+...-.++    +.+.++.++.++|+|
T Consensus        10 ~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~---------~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v   80 (389)
T PRK06849         10 TGARAPAALELARLFHNAGHTVILADSLKYPLSRFSR---------AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL   80 (389)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHH---------hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence            6888889999999999999999999887644211000         011221111111232    556666777789999


Q ss_pred             EEcCC
Q 021331           77 YDING   81 (314)
Q Consensus        77 i~~a~   81 (314)
                      |-+..
T Consensus        81 IP~~e   85 (389)
T PRK06849         81 IPTCE   85 (389)
T ss_pred             EECCh
Confidence            98765

>PRK08462 biotin carboxylase; Validated

Probab=90.21  E-value=1.3  Score=40.43  Aligned_cols=69  Identities=12%  Similarity=-0.041  Sum_probs=49.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEe-------cCCChhhHHHhhhcCCccE
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG-------DRKDYDFVKSSLSAKGFDV   75 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------D~~d~~~l~~~~~~~~~d~   75 (314)
                      +.|.++..+++.+.+.|++|++++...+.....+..          . -+.+..       ++.|.+.+-++.++.++|+
T Consensus        11 ~~g~~~~~~~~~~~~~G~~~v~~~~~~d~~~~~~~~----------a-d~~~~~~~~~~~~~y~~~~~l~~~~~~~~~D~   79 (445)
T PRK08462         11 NRGEIALRAIRTIQEMGKEAIAIYSTADKDALYLKY----------A-DAKICIGGAKSSESYLNIPAIISAAEIFEADA   79 (445)
T ss_pred             CCcHHHHHHHHHHHHcCCCEEEEechhhcCCchhhh----------C-CEEEEeCCCchhcccCCHHHHHHHHHHcCCCE
Confidence            468899999999999999999987655442111110          1 112222       6778888999998889999


Q ss_pred             EEEcCCC
Q 021331           76 VYDINGR   82 (314)
Q Consensus        76 vi~~a~~   82 (314)
                      |+-..+.
T Consensus        80 i~pg~g~   86 (445)
T PRK08462         80 IFPGYGF   86 (445)
T ss_pred             EEECCCc
Confidence            9988764

>PRK06932 glycerate dehydrogenase; Provisional

Probab=90.21  E-value=0.98  Score=39.20  Aligned_cols=78  Identities=17%  Similarity=0.104  Sum_probs=50.9

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|..-|.+|++.+|.... .                 .     +. ...++++++.  .+|+|+.+...
T Consensus       154 G~G~IG~~va~~l~~fg~~V~~~~~~~~~-~-----------------~-----~~-~~~~l~ell~--~sDiv~l~~Pl  207 (314)
T PRK06932        154 GKGCLGTEVGRLAQALGMKVLYAEHKGAS-V-----------------C-----RE-GYTPFEEVLK--QADIVTLHCPL  207 (314)
T ss_pred             CCCHHHHHHHHHHhcCCCEEEEECCCccc-c-----------------c-----cc-ccCCHHHHHH--hCCEEEEcCCC
Confidence            56999999999999889999988764321 0                 0     00 1235889998  89999876654


Q ss_pred             Ccc----cHHHHHHhCCCCCcEEEEeec
Q 021331           83 EAD----EVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        83 ~~~----~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      +..    -....++.|+....||.++=.
T Consensus       208 t~~T~~li~~~~l~~mk~ga~lIN~aRG  235 (314)
T PRK06932        208 TETTQNLINAETLALMKPTAFLINTGRG  235 (314)
T ss_pred             ChHHhcccCHHHHHhCCCCeEEEECCCc
Confidence            332    123455556655566665543

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=90.10  E-value=1.4  Score=34.00  Aligned_cols=74  Identities=15%  Similarity=0.104  Sum_probs=47.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |=|.+|+.+|+.|...|.+|+++..++-...+           ....+++..        .+++++.  ..|++|.+.|.
T Consensus        30 GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alq-----------A~~dGf~v~--------~~~~a~~--~adi~vtaTG~   88 (162)
T PF00670_consen   30 GYGKVGKGIARALRGLGARVTVTEIDPIRALQ-----------AAMDGFEVM--------TLEEALR--DADIFVTATGN   88 (162)
T ss_dssp             --SHHHHHHHHHHHHTT-EEEEE-SSHHHHHH-----------HHHTT-EEE---------HHHHTT--T-SEEEE-SSS
T ss_pred             CCCcccHHHHHHHhhCCCEEEEEECChHHHHH-----------hhhcCcEec--------CHHHHHh--hCCEEEECCCC
Confidence            34899999999999999999999988755321           112445433        3667777  89999998887


Q ss_pred             CcccHHHHHHhCCCC
Q 021331           83 EADEVEPILDALPNL   97 (314)
Q Consensus        83 ~~~~~~~~~~~~~~~   97 (314)
                      ...-+..-++.++..
T Consensus        89 ~~vi~~e~~~~mkdg  103 (162)
T PF00670_consen   89 KDVITGEHFRQMKDG  103 (162)
T ss_dssp             SSSB-HHHHHHS-TT
T ss_pred             ccccCHHHHHHhcCC
Confidence            655566777777754

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>KOG0409 consensus Predicted dehydrogenase [General function prediction only]

Probab=90.07  E-value=0.89  Score=38.51  Aligned_cols=31  Identities=29%  Similarity=0.420  Sum_probs=28.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA   33 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   33 (314)
                      |.|.+|.+++..|++.||.|++.+|..++..
T Consensus        42 GLG~MG~~M~~nLik~G~kVtV~dr~~~k~~   72 (327)
T KOG0409|consen   42 GLGNMGSAMVSNLIKAGYKVTVYDRTKDKCK   72 (327)
T ss_pred             eeccchHHHHHHHHHcCCEEEEEeCcHHHHH
Confidence            5688999999999999999999999988753

>PLN03139 formate dehydrogenase; Provisional

Probab=89.96  E-value=0.83  Score=40.73  Aligned_cols=82  Identities=13%  Similarity=0.003  Sum_probs=51.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|.+|++.+|....... ..          ..++.       -.+++++++.  ++|+|+.+...
T Consensus       206 G~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~-~~----------~~g~~-------~~~~l~ell~--~sDvV~l~lPl  265 (386)
T PLN03139        206 GAGRIGRLLLQRLKPFNCNLLYHDRLKMDPEL-EK----------ETGAK-------FEEDLDAMLP--KCDVVVINTPL  265 (386)
T ss_pred             eecHHHHHHHHHHHHCCCEEEEECCCCcchhh-Hh----------hcCce-------ecCCHHHHHh--hCCEEEEeCCC
Confidence            57999999999999999999998876432110 00          01111       1235778888  89999877653


Q ss_pred             CcccHHH-----HHHhCCCCCcEEEEee
Q 021331           83 EADEVEP-----ILDALPNLEQFIYCSS  105 (314)
Q Consensus        83 ~~~~~~~-----~~~~~~~~~~~i~~Ss  105 (314)
                      + ..+..     ++..|+....||.++-
T Consensus       266 t-~~T~~li~~~~l~~mk~ga~lIN~aR  292 (386)
T PLN03139        266 T-EKTRGMFNKERIAKMKKGVLIVNNAR  292 (386)
T ss_pred             C-HHHHHHhCHHHHhhCCCCeEEEECCC
Confidence            2 23433     4455555455555443

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=89.96  E-value=1.9  Score=39.51  Aligned_cols=115  Identities=14%  Similarity=0.058  Sum_probs=66.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      +||+|.+|.++++.|...|.+|+++.+....... ..          ..++.-+.+|.+..+..+++..   .       
T Consensus        44 ~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~-~~----------~~~~~~~~~d~~~~~~~~~l~~---~-------  102 (450)
T PRK08261         44 VGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA-GW----------GDRFGALVFDATGITDPADLKA---L-------  102 (450)
T ss_pred             EccCchhHHHHHHHHhhCCCeeeecCcccccccc-Cc----------CCcccEEEEECCCCCCHHHHHH---H-------
Confidence            4788999999999999999999987765543211 11          1345545567765444333321   0       


Q ss_pred             CCCcccHHHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHH------hcCCceEEEecC
Q 021331           81 GREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLE------SKGVNWTSLRPV  145 (314)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~------~~~~~~~ilR~~  145 (314)
                         .......+..+....+||++++......   .   ..|..+|...+.+.+      ..++.+..+.++
T Consensus       103 ---~~~~~~~l~~l~~~griv~i~s~~~~~~---~---~~~~~akaal~gl~rsla~E~~~gi~v~~i~~~  164 (450)
T PRK08261        103 ---YEFFHPVLRSLAPCGRVVVLGRPPEAAA---D---PAAAAAQRALEGFTRSLGKELRRGATAQLVYVA  164 (450)
T ss_pred             ---HHHHHHHHHhccCCCEEEEEccccccCC---c---hHHHHHHHHHHHHHHHHHHHhhcCCEEEEEecC
Confidence               0223345555555568998888654321   1   135555655555443      234555556554

>PRK07411 hypothetical protein; Validated

Probab=89.93  E-value=2.7  Score=37.72  Aligned_cols=103  Identities=17%  Similarity=0.082  Sum_probs=60.4

Q ss_pred             cccccHHHHHHHHHHCC-CeEEEEEcCCcc---cccCCCC-CC----------chhhhhccCceEE--EEecCCChhhHH
Q 021331            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAP---IAQQLPG-ES----------DQEFAEFSSKILH--LKGDRKDYDFVK   65 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~~---~~~~~~~-~~----------~~~~~~~~~~~~~--~~~D~~d~~~l~   65 (314)
                      |.|.+|..+++.|...| -++++++.+.-.   ..++... ..          .+.+.+..+.+++  +...+ +++...
T Consensus        45 G~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~~~-~~~~~~  123 (390)
T PRK07411         45 GTGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYETRL-SSENAL  123 (390)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEeccc-CHHhHH
Confidence            56999999999999999 477777765422   2221110 00          1223333344443  33344 344566


Q ss_pred             HhhhcCCccEEEEcCCCCcccHHH-HHHhCC-CCCcEEEEeeceeec
Q 021331           66 SSLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSAGVYL  110 (314)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~-~~~~~~-~~~~~i~~Ss~~v~~  110 (314)
                      ++++  ++|+||.+....  .++. +-++|. ..+.+|+.+..+.+|
T Consensus       124 ~~~~--~~D~Vvd~~d~~--~~r~~ln~~~~~~~~p~v~~~~~g~~g  166 (390)
T PRK07411        124 DILA--PYDVVVDGTDNF--PTRYLVNDACVLLNKPNVYGSIFRFEG  166 (390)
T ss_pred             HHHh--CCCEEEECCCCH--HHHHHHHHHHHHcCCCEEEEEEccCEE
Confidence            7787  899999987643  2333 334454 556788777665554

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=89.91  E-value=0.52  Score=41.17  Aligned_cols=90  Identities=16%  Similarity=0.108  Sum_probs=49.0

Q ss_pred             CCcccccHHHHHHHHHHCC---CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      .||||++|..+++.|.++.   .++..+....+. .+.+..      .  ...+.+.  ++   +.  ..+.  ++|++|
T Consensus        10 vGATG~vG~ellrlL~~~~hP~~~l~~laS~~sa-G~~~~~------~--~~~~~v~--~~---~~--~~~~--~~Dvvf   71 (336)
T PRK08040         10 LGATGAVGEALLELLAERQFPVGELYALASEESA-GETLRF------G--GKSVTVQ--DA---AE--FDWS--QAQLAF   71 (336)
T ss_pred             EccCCHHHHHHHHHHhcCCCCceEEEEEEccCcC-CceEEE------C--CcceEEE--eC---ch--hhcc--CCCEEE
Confidence            4999999999999999853   466666544332 111110      0  0111111  22   11  1234  799999


Q ss_pred             EcCCCCcccHHHHHHhC-CCCCcEEEEeeceeec
Q 021331           78 DINGREADEVEPILDAL-PNLEQFIYCSSAGVYL  110 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~-~~~~~~i~~Ss~~v~~  110 (314)
                      .+++..  ....++..+ ....++|=.|++.-+.
T Consensus        72 ~a~p~~--~s~~~~~~~~~~g~~VIDlS~~fRl~  103 (336)
T PRK08040         72 FVAGRE--ASAAYAEEATNAGCLVIDSSGLFALE  103 (336)
T ss_pred             ECCCHH--HHHHHHHHHHHCCCEEEECChHhcCC
Confidence            888644  233344433 2334677777766543

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=89.83  E-value=0.44  Score=38.35  Aligned_cols=29  Identities=21%  Similarity=0.323  Sum_probs=25.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |.|.+|+.+++.|.+.|++|++.+++...
T Consensus        35 G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~   63 (200)
T cd01075          35 GLGKVGYKLAEHLLEEGAKLIVADINEEA   63 (200)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence            34899999999999999999988887654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=89.80  E-value=1.3  Score=39.50  Aligned_cols=182  Identities=12%  Similarity=0.038  Sum_probs=94.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |+|.+|..+++.+...|.+|++++++.+.......          ..++..+ .|..+.+.+.+...  ++|+||.+.|.
T Consensus       186 G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~----------~lGa~~~-i~~~~~~~v~~~~~--~~D~vid~~G~  252 (375)
T PLN02178        186 GLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAID----------RLGADSF-LVTTDSQKMKEAVG--TMDFIIDTVSA  252 (375)
T ss_pred             cccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHH----------hCCCcEE-EcCcCHHHHHHhhC--CCcEEEECCCc
Confidence            45999999999999999999988876543211111          0123222 23334445555544  68999999874


Q ss_pred             CcccHHHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCceEEEecCeeeCCCCCCchhHHHHH
Q 021331           83 EADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFH  162 (314)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~  162 (314)
                      .. .....++.++...+++.++..   +..  .++.         ...++. ..+   .++-+..++.    .-+...+.
T Consensus       253 ~~-~~~~~~~~l~~~G~iv~vG~~---~~~--~~~~---------~~~~~~-~~~---~i~g~~~~~~----~~~~~~~~  309 (375)
T PLN02178        253 EH-ALLPLFSLLKVSGKLVALGLP---EKP--LDLP---------IFPLVL-GRK---MVGGSQIGGM----KETQEMLE  309 (375)
T ss_pred             HH-HHHHHHHhhcCCCEEEEEccC---CCC--CccC---------HHHHHh-CCe---EEEEeCccCH----HHHHHHHH
Confidence            32 345566667755688876532   111  1110         111111 111   2222221111    12444555


Q ss_pred             HHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCccccHHHHHHHHHHHhCC
Q 021331          163 RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGF  229 (314)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~  229 (314)
                      .+..++. ..    .  ......+|+.+++..+.+... .+++.... ++.+--..-++.+.++...
T Consensus       310 l~~~g~i-~~----~--i~~~~l~~~~~A~~~~~~~~~-~gkvvi~~-~~~~~~~~~~~~~~~~~~~  367 (375)
T PLN02178        310 FCAKHKI-VS----D--IELIKMSDINSAMDRLAKSDV-RYRFVIDV-ANSLLPESSAEILTEHVDH  367 (375)
T ss_pred             HHHhCCC-cc----c--EEEEeHHHHHHHHHHHHcCCC-ceEEEEEe-cccccCccchHHHHhhccc
Confidence            5555542 11    1  133578999888887765432 34432222 4444444556666666553

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=89.71  E-value=1.2  Score=41.15  Aligned_cols=91  Identities=16%  Similarity=0.157  Sum_probs=59.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCC-------------hh-------
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-------------YD-------   62 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-------------~~-------   62 (314)
                      |.|-+|...+..+...|..|++++++...... ..          ..+.+++..|..+             .+       
T Consensus       171 GaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~-a~----------~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~  239 (511)
T TIGR00561       171 GAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQ-VQ----------SMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME  239 (511)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----------HcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence            35999999999999999999999988765321 11          1234455555321             11       


Q ss_pred             hHHHhhhcCCccEEEEcC---CCCc--ccHHHHHHhCCCCCcEEEEeec
Q 021331           63 FVKSSLSAKGFDVVYDIN---GREA--DEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        63 ~l~~~~~~~~~d~vi~~a---~~~~--~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      .+.+..+  ++|+||.++   |...  .-+...++.++....+|-+|+.
T Consensus       240 ~~~e~~~--~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d  286 (511)
T TIGR00561       240 LFAAQAK--EVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAE  286 (511)
T ss_pred             HHHHHhC--CCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeC
Confidence            1333344  799999998   4322  3567788888855677777763

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=89.57  E-value=1.2  Score=32.38  Aligned_cols=91  Identities=15%  Similarity=0.081  Sum_probs=50.9

Q ss_pred             cccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCCCc
Q 021331            5 RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREA   84 (314)
Q Consensus         5 G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~~~   84 (314)
                      +..|..+.+.|.+.|++|+.+.-+....                .+..       -..++.+.-.  .+|.++-+..  .
T Consensus        13 ~~~g~~v~~~l~~~G~~v~~Vnp~~~~i----------------~G~~-------~y~sl~e~p~--~iDlavv~~~--~   65 (116)
T PF13380_consen   13 GKFGYRVLRNLKAAGYEVYPVNPKGGEI----------------LGIK-------CYPSLAEIPE--PIDLAVVCVP--P   65 (116)
T ss_dssp             TSHHHHHHHHHHHTT-EEEEESTTCSEE----------------TTEE--------BSSGGGCSS--T-SEEEE-S---H
T ss_pred             CChHHHHHHHHHhCCCEEEEECCCceEE----------------CcEE-------eeccccCCCC--CCCEEEEEcC--H
Confidence            6789999999999999999886555331                1221       1122333112  7888876654  4


Q ss_pred             ccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCce
Q 021331           85 DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNW  139 (314)
Q Consensus        85 ~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~~  139 (314)
                      ..+..+++.|.  +++.+++.++                 .....+.+.+++.++++
T Consensus        66 ~~~~~~v~~~~~~g~~~v~~~~g-----------------~~~~~~~~~a~~~gi~v  105 (116)
T PF13380_consen   66 DKVPEIVDEAAALGVKAVWLQPG-----------------AESEELIEAAREAGIRV  105 (116)
T ss_dssp             HHHHHHHHHHHHHT-SEEEE-TT-----------------S--HHHHHHHHHTT-EE
T ss_pred             HHHHHHHHHHHHcCCCEEEEEcc-----------------hHHHHHHHHHHHcCCEE
Confidence            44555666665  7778777666                 11335566667777653

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=89.56  E-value=0.83  Score=35.60  Aligned_cols=47  Identities=23%  Similarity=0.320  Sum_probs=35.2

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |+.+.+|..+++.|.++|.+|+++.|+.                                +.+.+.+.  ++|+||.+.+
T Consensus        51 G~G~~~G~~~a~~L~~~g~~V~v~~r~~--------------------------------~~l~~~l~--~aDiVIsat~   96 (168)
T cd01080          51 GRSNIVGKPLAALLLNRNATVTVCHSKT--------------------------------KNLKEHTK--QADIVIVAVG   96 (168)
T ss_pred             CCcHHHHHHHHHHHhhCCCEEEEEECCc--------------------------------hhHHHHHh--hCCEEEEcCC
Confidence            5544568889999999988888877652                                23556777  8999998876


Q ss_pred             C
Q 021331           82 R   82 (314)
Q Consensus        82 ~   82 (314)
                      .
T Consensus        97 ~   97 (168)
T cd01080          97 K   97 (168)
T ss_pred             C
Confidence            5

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=89.52  E-value=1.5  Score=37.99  Aligned_cols=92  Identities=15%  Similarity=0.173  Sum_probs=56.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChh---hHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~l~~~~~~~~~d~vi   77 (314)
                      .|++|.+|..+++.+...|.+|++++++..........          -++. ...+..+.+   .+..... .++|+++
T Consensus       152 ~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~----------~g~~-~~~~~~~~~~~~~v~~~~~-~~~d~vi  219 (329)
T cd05288         152 SAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEE----------LGFD-AAINYKTPDLAEALKEAAP-DGIDVYF  219 (329)
T ss_pred             ecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhh----------cCCc-eEEecCChhHHHHHHHhcc-CCceEEE
Confidence            47899999999999999999999998776542211000          0111 112233322   2222221 3699999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEeec
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      ++.+.  ......++.+....+++.+++.
T Consensus       220 ~~~g~--~~~~~~~~~l~~~G~~v~~g~~  246 (329)
T cd05288         220 DNVGG--EILDAALTLLNKGGRIALCGAI  246 (329)
T ss_pred             EcchH--HHHHHHHHhcCCCceEEEEeec
Confidence            99874  3455666777755678877653

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK05442 malate dehydrogenase; Provisional

Probab=89.51  E-value=0.95  Score=39.47  Aligned_cols=30  Identities=20%  Similarity=0.127  Sum_probs=24.4

Q ss_pred             CCcccccHHHHHHHHHHCC--C-----eEEEEEcCCc
Q 021331            1 MGGTRFIGVFLSRLLVKEG--H-----QVTLFTRGKA   30 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~-----~V~~~~r~~~   30 (314)
                      +|++|.+|+.++-.|...+  .     +++.++.++.
T Consensus        10 iGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~   46 (326)
T PRK05442         10 TGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPA   46 (326)
T ss_pred             ECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCc
Confidence            4888999999999998776  2     7888888643

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=89.41  E-value=0.28  Score=38.94  Aligned_cols=29  Identities=28%  Similarity=0.449  Sum_probs=23.7

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |.|++|..++..|.+.||+|++++.+++.
T Consensus         7 GlGyvGl~~A~~lA~~G~~V~g~D~~~~~   35 (185)
T PF03721_consen    7 GLGYVGLPLAAALAEKGHQVIGVDIDEEK   35 (185)
T ss_dssp             --STTHHHHHHHHHHTTSEEEEE-S-HHH
T ss_pred             CCCcchHHHHHHHHhCCCEEEEEeCChHH
Confidence            67999999999999999999999988765

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=89.40  E-value=0.84  Score=39.41  Aligned_cols=76  Identities=14%  Similarity=0.101  Sum_probs=45.1

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      .||||++|..|++.|.++. .++..+..+...                         ++.+   ..+.+.  ++|+||.+
T Consensus         8 vGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~-------------------------~~~~---~~~~~~--~~DvvFla   57 (313)
T PRK11863          8 DGEAGTTGLQIRERLAGRSDIELLSIPEAKRK-------------------------DAAA---RRELLN--AADVAILC   57 (313)
T ss_pred             ECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC-------------------------cccC---chhhhc--CCCEEEEC
Confidence            4999999999999998886 355555433221                         1111   123445  78999987


Q ss_pred             CCCCcccHHHHHHhC-CCCCcEEEEeecee
Q 021331           80 NGREADEVEPILDAL-PNLEQFIYCSSAGV  108 (314)
Q Consensus        80 a~~~~~~~~~~~~~~-~~~~~~i~~Ss~~v  108 (314)
                      .+..  ....++..+ ....++|=.|++.-
T Consensus        58 lp~~--~s~~~~~~~~~~g~~VIDlSadfR   85 (313)
T PRK11863         58 LPDD--AAREAVALIDNPATRVIDASTAHR   85 (313)
T ss_pred             CCHH--HHHHHHHHHHhCCCEEEECChhhh
Confidence            7543  233344433 33446777776543

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=89.40  E-value=1.5  Score=37.50  Aligned_cols=91  Identities=24%  Similarity=0.258  Sum_probs=56.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCC---hhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d---~~~l~~~~~~~~~d~vi   77 (314)
                      +|++|.+|..+++.+...|.+|++++++...... +.        +  .++..+ .+..+   .+.+.......++|.++
T Consensus       146 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~-~~--------~--~g~~~~-~~~~~~~~~~~i~~~~~~~~~d~v~  213 (323)
T cd08241         146 LGAAGGVGLAAVQLAKALGARVIAAASSEEKLAL-AR--------A--LGADHV-IDYRDPDLRERVKALTGGRGVDVVY  213 (323)
T ss_pred             EcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHH-HH--------H--cCCcee-eecCCccHHHHHHHHcCCCCcEEEE
Confidence            4788999999999999999999999887654221 11        0  111111 12222   23344443334689999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ++.+.  ......++.+....+++.++.
T Consensus       214 ~~~g~--~~~~~~~~~~~~~g~~v~~~~  239 (323)
T cd08241         214 DPVGG--DVFEASLRSLAWGGRLLVIGF  239 (323)
T ss_pred             ECccH--HHHHHHHHhhccCCEEEEEcc
Confidence            98874  344556666665567777664

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=89.40  E-value=1.9  Score=37.16  Aligned_cols=92  Identities=15%  Similarity=0.104  Sum_probs=57.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh---hhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~l~~~~~~~~~d~vi   77 (314)
                      .|++|.+|..+++.+...|.+|++++++.+.... +..          .++. ...+..+.   ..+.+.....++|.++
T Consensus       145 ~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~-~~~----------~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vl  212 (323)
T cd05282         145 NAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEE-LKA----------LGAD-EVIDSSPEDLAQRVKEATGGAGARLAL  212 (323)
T ss_pred             cccccHHHHHHHHHHHHCCCeEEEEecChHHHHH-HHh----------cCCC-EEecccchhHHHHHHHHhcCCCceEEE
Confidence            4788999999999999999999998887655321 110          1121 11222222   2233333334799999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEeec
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      ++.+..  ......+.+....+++.++..
T Consensus       213 ~~~g~~--~~~~~~~~l~~~g~~v~~g~~  239 (323)
T cd05282         213 DAVGGE--SATRLARSLRPGGTLVNYGLL  239 (323)
T ss_pred             ECCCCH--HHHHHHHhhCCCCEEEEEccC
Confidence            998743  244566767666688876653

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=89.38  E-value=0.94  Score=38.52  Aligned_cols=49  Identities=24%  Similarity=0.407  Sum_probs=38.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      +|+++.+|..++..|.++|.+|+++.++.                                ..+.+.++  +.|+||.+.
T Consensus       164 IGrs~~VG~pla~lL~~~gatVtv~~s~t--------------------------------~~l~~~~~--~ADIVIsAv  209 (286)
T PRK14175        164 IGRSHIVGQPVSKLLLQKNASVTILHSRS--------------------------------KDMASYLK--DADVIVSAV  209 (286)
T ss_pred             ECCCchhHHHHHHHHHHCCCeEEEEeCCc--------------------------------hhHHHHHh--hCCEEEECC
Confidence            47778899999999999999998877532                                12556777  899999998


Q ss_pred             CCC
Q 021331           81 GRE   83 (314)
Q Consensus        81 ~~~   83 (314)
                      |..
T Consensus       210 g~p  212 (286)
T PRK14175        210 GKP  212 (286)
T ss_pred             CCC
Confidence            763

>PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated

Probab=89.37  E-value=1.7  Score=39.89  Aligned_cols=69  Identities=12%  Similarity=-0.008  Sum_probs=46.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEE-------ecCCChhhHHHhhhcCCccE
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK-------GDRKDYDFVKSSLSAKGFDV   75 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~D~~d~~~l~~~~~~~~~d~   75 (314)
                      +.|.+|..+++.+.+.|++|++++..+........          ... +.+.       -++.|.+.+.++..+.++|+
T Consensus         9 g~g~~a~~i~~aa~~~G~~vv~~~~~~d~~a~~~~----------~ad-~~~~~~~~~~~~~y~d~~~l~~~a~~~~id~   77 (451)
T PRK08591          9 NRGEIALRIIRACKELGIKTVAVHSTADRDALHVQ----------LAD-EAVCIGPAPSKKSYLNIPAIISAAEITGADA   77 (451)
T ss_pred             CCCHHHHHHHHHHHHcCCeEEEEcChhhccCCCHh----------HCC-EEEEeCCCCcccccCCHHHHHHHHHHhCCCE
Confidence            46899999999999999999998665433111110          011 1222       14567778888877779999


Q ss_pred             EEEcCCC
Q 021331           76 VYDINGR   82 (314)
Q Consensus        76 vi~~a~~   82 (314)
                      |+-..+.
T Consensus        78 I~p~~~~   84 (451)
T PRK08591         78 IHPGYGF   84 (451)
T ss_pred             EEECCCc
Confidence            9977653

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=89.12  E-value=2.3  Score=34.95  Aligned_cols=106  Identities=18%  Similarity=0.154  Sum_probs=62.0

Q ss_pred             cccccHHHHHHHHHHCC-CeEEEEEcCC---cccccCCCCC-----------CchhhhhccCceEEEEe-cCCChhhHHH
Q 021331            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGK---APIAQQLPGE-----------SDQEFAEFSSKILHLKG-DRKDYDFVKS   66 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~~~r~~---~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~-D~~d~~~l~~   66 (314)
                      |-|.+|+..++.|.+.| -++++++-+.   .+.++++...           -..++...-+.+++... |+.+++.+++
T Consensus        37 GiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f~t~en~~~  116 (263)
T COG1179          37 GIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDFITEENLED  116 (263)
T ss_pred             ecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhhhCHhHHHH
Confidence            45999999999999998 3677776443   1222222211           00222222344555544 4557888888


Q ss_pred             hhhcCCccEEEEcCCCCcccHHHHHHhCCCCCcEEEEeeceeecc
Q 021331           67 SLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLK  111 (314)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~~v~~~  111 (314)
                      ++.. ++|.||.+.-. +..-..++..|.+.+. -++||+++-+.
T Consensus       117 ~~~~-~~DyvIDaiD~-v~~Kv~Li~~c~~~ki-~vIss~Gag~k  158 (263)
T COG1179         117 LLSK-GFDYVIDAIDS-VRAKVALIAYCRRNKI-PVISSMGAGGK  158 (263)
T ss_pred             HhcC-CCCEEEEchhh-hHHHHHHHHHHHHcCC-CEEeeccccCC
Confidence            8863 79999998753 2223346666663222 45577766443

>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating

Probab=89.07  E-value=0.79  Score=42.10  Aligned_cols=30  Identities=20%  Similarity=0.380  Sum_probs=27.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~   32 (314)
                      |.|-+|.++++.|+++|++|++.+|++++.
T Consensus         6 GLG~MG~~mA~nL~~~G~~V~v~drt~~~~   35 (467)
T TIGR00873         6 GLAVMGSNLALNMADHGFTVSVYNRTPEKT   35 (467)
T ss_pred             eeHHHHHHHHHHHHhcCCeEEEEeCCHHHH
Confidence            579999999999999999999999988764

This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=89.06  E-value=0.78  Score=40.53  Aligned_cols=89  Identities=20%  Similarity=0.242  Sum_probs=46.9

Q ss_pred             CCcccccHHHHHHHHHHC-CCe---EEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQ---VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~v   76 (314)
                      .||||++|..+++.|+++ .+.   ++.++...+... ...         + .+-.....+..+++.    +.  ++|++
T Consensus         7 VGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~-~~~---------f-~g~~~~v~~~~~~~~----~~--~~Div   69 (369)
T PRK06598          7 VGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGA-APS---------F-GGKEGTLQDAFDIDA----LK--KLDII   69 (369)
T ss_pred             EeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCc-ccc---------c-CCCcceEEecCChhH----hc--CCCEE
Confidence            499999999999966555 555   666555432211 111         0 111222334444332    34  79999


Q ss_pred             EEcCCCCcccHHHHHHhC-C-CC-CcEEEEeecee
Q 021331           77 YDINGREADEVEPILDAL-P-NL-EQFIYCSSAGV  108 (314)
Q Consensus        77 i~~a~~~~~~~~~~~~~~-~-~~-~~~i~~Ss~~v  108 (314)
                      |.+++..  ....+...+ . +. ..+|=.||..-
T Consensus        70 f~a~~~~--~s~~~~~~~~~aG~~~~VID~Ss~fR  102 (369)
T PRK06598         70 ITCQGGD--YTNEVYPKLRAAGWQGYWIDAASTLR  102 (369)
T ss_pred             EECCCHH--HHHHHHHHHHhCCCCeEEEECChHHh
Confidence            9888754  233333333 2 33 23555555443

>cd08230 glucose_DH Glucose dehydrogenase

Probab=89.00  E-value=1  Score=39.72  Aligned_cols=88  Identities=18%  Similarity=0.180  Sum_probs=52.1

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCC---cccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGK---APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      | +|.+|...++.+...|.+|++++|+.   .+.. ...          ..++.++  |..+.+ +.+.....++|+||.
T Consensus       180 G-~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~----------~~Ga~~v--~~~~~~-~~~~~~~~~~d~vid  244 (355)
T cd08230         180 G-AGPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVE----------ELGATYV--NSSKTP-VAEVKLVGEFDLIIE  244 (355)
T ss_pred             C-CCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHH----------HcCCEEe--cCCccc-hhhhhhcCCCCEEEE
Confidence            5 59999999998888899999999842   2211 111          1233332  333322 111111137999999


Q ss_pred             cCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           79 INGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +.|... .....++.++...+++.++.
T Consensus       245 ~~g~~~-~~~~~~~~l~~~G~~v~~G~  270 (355)
T cd08230         245 ATGVPP-LAFEALPALAPNGVVILFGV  270 (355)
T ss_pred             CcCCHH-HHHHHHHHccCCcEEEEEec
Confidence            998432 34456666775557776654

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	314
1gy8_A	397	Trypanosoma Brucei Udp-Galactose 4' Epimerase Lengt		8e-05
1e7s_A	321	Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase K1		3e-04
1e6u_A	321	Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Le		4e-04
1bws_A	321	Crystal Structure Of Gdp-4-Keto-6-Deoxy-D-Mannose E		5e-04
1bsv_A	321	Gdp-Fucose Synthetase From Escherichia Coli Complex		6e-04

>pdb|1GY8|A Chain A, Trypanosoma Brucei Udp-Galactose 4' Epimerase Length = 397

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 20/125 (16%)
Query: 167 GRPIPIPGSGIQVTQLGHVKDLARA------FVQVLGNEKASR--QVFNISGEKYVTFDG 218
           G   P P  G  V    HV DLA A      +V+ LG    S+   VFN+   +  +   
Sbjct: 258 GTDYPTP-DGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVRE 316
Query: 219 LARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVE 278
           +     K  G P P          + G+++  P    +  A+ +KA+ VLGWKP++D +E
Sbjct: 317 VIEVARKTTGHPIPVR--------ECGRREGDP---AYLVAASDKAREVLGWKPKYDTLE 365
Query: 279 GLADS 283
            + ++
Sbjct: 366 AIMET 370

>pdb|1E7S|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase K140r Length = 321

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 111/305 (36%), Gaps = 62/305 (20%)
Query: 30  APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEP 89
           + I +QL    D E    +   L+L   R  +DF  S    + +     + G  A+   P
Sbjct: 17  SAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYP 76
Query: 90  -------------ILDAL--PNLEQFIYCSSAGVYLK--------SDLL---------PH 117
                        I+ A    ++ + ++  S+ +Y K        S+LL         P+
Sbjct: 77  ADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPY 136
Query: 118 CESRHKGKLNTESVLESKGVNWTSLRPVYIYGPL-NYNPVEEWF-------FHRLKAGRP 169
             +R  G    ES     G ++ S+ P  +YGP  N++P            FH   A   
Sbjct: 137 AIARIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQSA 196
Query: 170 --IPIPGSGIQVTQLGHVKDLARAFVQV--------LGNEKASRQVFNISGEKYVTFDGL 219
             + + GSG  + +  HV D+A A + V        L N +      N+      T   L
Sbjct: 197 PDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIREL 256
Query: 220 ARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEG 279
           A+  AK  G+    +       FD  K    P +       V +  H LGW  E  L  G
Sbjct: 257 AQTIAKVVGYKGRVV-------FDASKPDGTPRK----LLDVTRL-HQLGWYHEISLEAG 304
Query: 280 LADSY 284
           LA +Y
Sbjct: 305 LASTY 309

>pdb|1E6U|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Length = 321

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 112/305 (36%), Gaps = 62/305 (20%)
Query: 30  APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEP 89
           + I +QL    D E    +   L+L   R  +DF  S    + +     + G  A+   P
Sbjct: 17  SAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYP 76
Query: 90  -------------ILDAL--PNLEQFIYCSSAGVYLK--------SDLL---------PH 117
                        I+ A    ++ + ++  S+ +Y K        S+LL         P+
Sbjct: 77  ADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPY 136
Query: 118 CESRHKGKLNTESVLESKGVNWTSLRPVYIYGPL-NYNPVEEWF-------FHRLKAGRP 169
             ++  G    ES     G ++ S+ P  +YGP  N++P            FH   A + 
Sbjct: 137 AIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKA 196
Query: 170 --IPIPGSGIQVTQLGHVKDLARAFVQV--------LGNEKASRQVFNISGEKYVTFDGL 219
             + + GSG  + +  HV D+A A + V        L N +      N+      T   L
Sbjct: 197 PDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIREL 256
Query: 220 ARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEG 279
           A+  AK  G+    +       FD  K    P +       V +  H LGW  E  L  G
Sbjct: 257 AQTIAKVVGYKGRVV-------FDASKPDGTPRK----LLDVTRL-HQLGWYHEISLEAG 304
Query: 280 LADSY 284
           LA +Y
Sbjct: 305 LASTY 309

>pdb|1BWS|A Chain A, Crystal Structure Of Gdp-4-Keto-6-Deoxy-D-Mannose EpimeraseREDUCTASE From Escherichia Coli A Key Enzyme In The Biosynthesis Of Gdp-L- Fucose Length = 321

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 111/305 (36%), Gaps = 62/305 (20%)
Query: 30  APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEP 89
           + I +QL    D E    +   L+L   R  +DF  S    + +     + G  A+   P
Sbjct: 17  SAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYP 76
Query: 90  -------------ILDAL--PNLEQFIYCSSAGVYLK--------SDLL---------PH 117
                        I+ A    ++ + ++  S+ +Y K        S+LL         P+
Sbjct: 77  ADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPY 136
Query: 118 CESRHKGKLNTESVLESKGVNWTSLRPVYIYGPL-NYNPVEEWF-------FHRLKAGRP 169
             ++  G    ES     G ++ S+ P  +YGP  N++P            FH   A   
Sbjct: 137 AIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNA 196
Query: 170 --IPIPGSGIQVTQLGHVKDLARAFVQV--------LGNEKASRQVFNISGEKYVTFDGL 219
             + + GSG  + +  HV D+A A + V        L N +      N+      T   L
Sbjct: 197 PDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRDL 256
Query: 220 ARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEG 279
           A+  AK  G+    +       FD  K    P +       V +  H LGW  E  L  G
Sbjct: 257 AQTIAKVVGYKGRVV-------FDASKPDGTPRK----LLDVTRL-HQLGWYHEISLEAG 304
Query: 280 LADSY 284
           LA +Y
Sbjct: 305 LASTY 309

>pdb|1BSV|A Chain A, Gdp-Fucose Synthetase From Escherichia Coli Complex With Nadph Length = 321

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 111/305 (36%), Gaps = 62/305 (20%)
Query: 30  APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEP 89
           + I +QL    D E    +   L+L   R  +DF  S    + +     + G  A+   P
Sbjct: 17  SAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYP 76
Query: 90  -------------ILDAL--PNLEQFIYCSSAGVYLK--------SDLL---------PH 117
                        I+ A    ++ + ++  S+ +Y K        S+LL         P+
Sbjct: 77  ADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPY 136
Query: 118 CESRHKGKLNTESVLESKGVNWTSLRPVYIYGPL-NYNPVEEWF-------FHRLKAGRP 169
             ++  G    ES     G ++ S+ P  +YGP  N++P            FH   A   
Sbjct: 137 AIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNA 196
Query: 170 --IPIPGSGIQVTQLGHVKDLARAFVQV--------LGNEKASRQVFNISGEKYVTFDGL 219
             + + GSG  + +  HV D+A A + V        L N +      N+      T   L
Sbjct: 197 PDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIREL 256
Query: 220 ARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEG 279
           A+  AK  G+    +       FD  K    P +       V +  H LGW  E  L  G
Sbjct: 257 AQTIAKVVGYKGRVV-------FDASKPDGTPRK----LLDVTRL-HQLGWYHEISLEAG 304
Query: 280 LADSY 284
           LA +Y
Sbjct: 305 LASTY 309

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	314
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	5e-29
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	1e-25
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	4e-24
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	8e-24
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	5e-23
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	5e-21
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	8e-20
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	2e-19
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	1e-18
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	1e-18
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	1e-18
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	2e-18
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	6e-18
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	9e-18
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	2e-17
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	2e-17
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	8e-17
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	2e-16
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	2e-16
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	3e-16
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	1e-15
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	3e-15
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	4e-15
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	1e-14
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	1e-14
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	3e-14
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	3e-14
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	4e-14
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	4e-14
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	1e-13
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	3e-13
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	1e-12
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	3e-12
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	3e-12
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	3e-12
1xq6_A	253	Unknown protein; structural genomics, protein stru	4e-11
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	1e-10
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	2e-10
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	4e-09
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	1e-08
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	1e-08
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	2e-08
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	8e-08
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	1e-07
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	1e-07
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	3e-07
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	3e-07
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	9e-07
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	4e-06
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	4e-05
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	5e-05
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	6e-05
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	1e-04
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	5e-04

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score =  112 bits (282), Expect = 5e-29
 Identities = 54/315 (17%), Positives = 96/315 (30%), Gaps = 63/315 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GGT F+G ++   +  +G+   +       K                E+         D 
Sbjct: 9   GGTGFLGQYVVESIKNDGNTPIILTRSIGNK-----------AINDYEY------RVSDY 51

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-------LEQ--------FIYC 103
              D +         D V  +          I +   N        +          +Y 
Sbjct: 52  TLEDLIN---QLNDVDAVVHLAA-TRGSQGKISEFHDNEILTQNLYDACYENNISNIVYA 107

Query: 104 SSAGVYLKSDLLPHCESRHK--------GKLNTESVLES----KGVNWTSLRPVYIYGP- 150
           S+   Y     LP  E             KL  E +       KG+   +LR  ++YG  
Sbjct: 108 STISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFN 167

Query: 151 LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 210
              N +   FF +   G  + +  + +   +  + KD A++ +  L  EK S   FNI  
Sbjct: 168 EKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVS-GTFNIGS 226

Query: 211 EKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGW 270
              +T   +A     A G     L+  NP                  +    KAK +L +
Sbjct: 227 GDALTNYEVANTINNAFGNK-DNLLVKNPNA---------NEGIHSSYMDSSKAKELLDF 276

Query: 271 KPEFDLVEGLADSYN 285
             +++    + + + 
Sbjct: 277 STDYNFATAVEEIHL 291

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score =  103 bits (259), Expect = 1e-25
 Identities = 58/311 (18%), Positives = 92/311 (29%), Gaps = 60/311 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           G    IG  ++ LL++ G +V     F  G+    + L    +  F         ++G  
Sbjct: 28  GICGQIGSHIAELLLERGDKVVGIDNFATGRR---EHLKDHPNLTF---------VEGSI 75

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL---------------EQFIYC 103
            D+  V   +     D V        D  +   D L N                 +F+Y 
Sbjct: 76  ADHALVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYF 135

Query: 104 SSAGVY-LKSDLLPHCESRHKG---------KLNTESVLESKGVNWTSLRPVYIYGPLNY 153
            +A  Y +K    P      +          K   E  LE  G+++ + R   + GP N 
Sbjct: 136 QTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGLDFVTFRLANVVGPRNV 195

Query: 154 NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY 213
           +     FF RL  G+   +            VKDLARA V+ +  +      ++ S    
Sbjct: 196 SGPLPIFFQRLSEGKKCFV---TKARRDFVFVKDLARATVRAV--DGVGHGAYHFSSGTD 250

Query: 214 VTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRD---QHFFASVEKAKHVLGW 270
           V    L  A  +A   P                                   +     G 
Sbjct: 251 VAIKELYDAVVEAMALPSYPEPEIRE------------LGPDDAPSILLDPSRTIQDFGK 298

Query: 271 KPEFDLVEGLA 281
                L E +A
Sbjct: 299 IEFTPLKETVA 309

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 99.7 bits (249), Expect = 4e-24
 Identities = 65/333 (19%), Positives = 106/333 (31%), Gaps = 78/333 (23%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           G   FIG  L   L+K   +V     F  G       L         +  S    ++GD 
Sbjct: 34  GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQR---NLDEVRSLVSEKQWSNFKFIQGDI 90

Query: 59  KDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPNL----------- 97
           ++ D   ++    G D V            IN       +PI     N+           
Sbjct: 91  RNLDDCNNAC--AGVDYVLHQAALGSVPRSIN-------DPITSNATNIDGFLNMLIAAR 141

Query: 98  ----EQFIYCSSAGVYLKSDLLPHCESRHK--------GKLNTESVLES----KGVNWTS 141
               + F Y +S+  Y     LP  E             K   E   +      G +   
Sbjct: 142 DAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIG 201

Query: 142 LRPVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 196
           LR   ++G        Y  V   +   +  G  + I G G       ++++  +A +   
Sbjct: 202 LRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAA 261

Query: 197 -GNEKASRQVFNISGEKYVT----FDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFP 251
                A  QV+NI+     +    F  L    A+       E V+               
Sbjct: 262 TAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYR-------------D 308

Query: 252 FRD---QHFFASVEKAKHVLGWKPEFDLVEGLA 281
           FR+   +H  A + KA  +LG+ P++D+  G+A
Sbjct: 309 FREGDVRHSLADISKAAKLLGYAPKYDVSAGVA 341

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 98.5 bits (246), Expect = 8e-24
 Identities = 51/332 (15%), Positives = 88/332 (26%), Gaps = 67/332 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T  +G   +R +   GH + L  R         P    Q  A    +      +  D+
Sbjct: 20  GATGLLGHHAARAIRAAGHDLVLIHR---------PSSQIQRLAYLEPEC--RVAEMLDH 68

Query: 62  DFVKSSLSAKGFDVVY------DINGREADEVEP--------ILDAL--PNLEQFIYCSS 105
             ++ +L  +G D V           R   E              A     + + +Y  S
Sbjct: 69  AGLERAL--RGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126

Query: 106 AGVY-LKSDLLPHCESRH------------KGKLNTES-VLE--SKGVNWTSLRPVYIYG 149
           A         LP  E                 K   +    E    G+      P  + G
Sbjct: 127 AYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLG 186

Query: 150 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 209
            L+  P        +  G           V       +  R  +  L   +   + + ++
Sbjct: 187 ELDIGPTTGRVITAIGNGEMTHYVAGQRNVI---DAAEAGRGLLMALERGRIG-ERYLLT 242

Query: 210 GEKYVTFDGLARACAKAAGFPEP---------------ELVH-YNPKEFDFGKKKAFPFR 253
           G   +    L R  A+  G P P                L +  + +     +       
Sbjct: 243 GH-NLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMA 301

Query: 254 DQHFFASVEKAKHVLGWKPEFDLVEGLADSYN 285
              F     KA+  LG+     L + L  + +
Sbjct: 302 GGQFL-DGRKAREELGFFSTTALDDTLLRAID 332

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 95.7 bits (239), Expect = 5e-23
 Identities = 64/318 (20%), Positives = 106/318 (33%), Gaps = 62/318 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  L   LV+ G++V +    + G+    + +        AE          D 
Sbjct: 7   GGAGFIGSHLVDKLVELGYEVVVVDNLSSGRR---EFVNPS-----AEL------HVRDL 52

Query: 59  KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
           KDY +          DVV+    +   R +   EPI+    N       LE         
Sbjct: 53  KDYSWGA----GIKGDVVFHFAANPEVRLSTT-EPIVHFNENVVATFNVLEWARQTGVRT 107

Query: 100 FIYCSSAGVYLKSDLLPHCESRHK--------GKLNTESVL----ESKGVNWTSLRPVYI 147
            ++ SS+ VY  +D++P  E             K   E +        GV   ++R   +
Sbjct: 108 VVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANV 167

Query: 148 YGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVL---GNEKASR 203
            GP   + V   F  +L+     + + G G Q     +V+D   A +          A  
Sbjct: 168 VGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPF 227

Query: 204 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEK 263
              N+     V    +A+  A+  G      +   P   D           ++   +V K
Sbjct: 228 LALNVGNVDAVRVLDIAQIVAEVLGLRPE--IRLVPSTPDGRGWPGDV---KYMTLAVTK 282

Query: 264 AKHVLGWKPEFDLVEGLA 281
              + GW+P     E + 
Sbjct: 283 LMKLTGWRPTMTSAEAVK 300

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 90.3 bits (225), Expect = 5e-21
 Identities = 57/316 (18%), Positives = 105/316 (33%), Gaps = 66/316 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  +   L  E +++ +    + G     + +        A        +K D 
Sbjct: 8   GGAGFIGSHVVDKLS-ESNEIVVIDNLSSGNE---EFVNEA-----ARL------VKADL 52

Query: 59  KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
              D        KG + V+    + + R   E  P      N       LE        +
Sbjct: 53  AADDIKDY---LKGAEEVWHIAANPDVRIGAE-NPDEIYRNNVLATYRLLEAMRKAGVSR 108

Query: 100 FIYCSSAGVYLKSDLLPHCESRHK--------GKLNTESVL----ESKGVNWTSLRPVYI 147
            ++ S++ VY ++ ++P  E             KL  E+++     +  +     R   +
Sbjct: 109 IVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYRFANV 168

Query: 148 YGP-LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 206
            G    +  + ++     +    + I G+G Q     ++ D   A +  L  ++    +F
Sbjct: 169 IGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERV-NIF 227

Query: 207 NISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRD-QHFFASVEKAK 265
           NI  E  +    +A    +  G   P            G        D      S+EK K
Sbjct: 228 NIGSEDQIKVKRIAEIVCEELGL-SPRFRFTGGDRGWKG--------DVPVMLLSIEKLK 278

Query: 266 HVLGWKPEFDLVEGLA 281
             LGWKP ++  E + 
Sbjct: 279 R-LGWKPRYNSEEAVR 293

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 87.0 bits (216), Expect = 8e-20
 Identities = 48/322 (14%), Positives = 96/322 (29%), Gaps = 68/322 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G +  IG  L   L ++  +  +       IA  +         +F      +  D  + 
Sbjct: 6   GSSGQIGTELVPYLAEKYGKKNV-------IASDIVQRDTGGI-KF------ITLDVSNR 51

Query: 62  DFVKSSLSAKGFDVVY------------------DINGREADEVEPILDAL--PNLEQFI 101
           D +  ++     D ++                   +N    +    IL+A     +E+ +
Sbjct: 52  DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVN---MNGTYNILEAAKQHRVEKVV 108

Query: 102 YCSSAGVYLKSDLLPHCESRHKG---------KLNTESVLES----KGVNWTSLRPVYIY 148
             S+ GV+          S             K+  E + +      G++  SLR   I 
Sbjct: 109 IPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGII 168

Query: 149 GP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS- 202
                            F+            +  +   + ++ D  +A V +   ++   
Sbjct: 169 SYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKL 228

Query: 203 --RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFAS 260
             R  +N++     T   L     +     E E   Y     DF  K A  + +      
Sbjct: 229 VLRNGYNVTAYT-FTPSELYSKIKERIPEFEIE---YKE---DFRDKIAATWPES---LD 278

Query: 261 VEKAKHVLGWKPEFDLVEGLAD 282
             +A +  G+  E+DL   + D
Sbjct: 279 SSEASNEWGFSIEYDLDRTIDD 300

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 85.7 bits (212), Expect = 2e-19
 Identities = 40/280 (14%), Positives = 93/280 (33%), Gaps = 14/280 (5%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T +IG  +++  +  GH   L  R     +     +  + F    + I+H  G   D+
Sbjct: 11  GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH--GSIDDH 68

Query: 62  DFVKSSLSAKGFDVVYD-INGREADEVEPILDA---LPNLEQFIYCSSAGVYLKSDLLPH 117
             +  ++  K  DVV   +   + +    I+ A   +  +++F              +  
Sbjct: 69  ASLVEAV--KNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEP 126

Query: 118 CESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGI 177
            +S  + K      +E++G+ +T +      G   +                + I G G 
Sbjct: 127 AKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAG--YFLRSLAQAGLTAPPRDKVVILGDGN 184

Query: 178 QVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKAAGFPEPELVH 236
                   +D+    ++ + + +   +   +      ++ + L     K     +     
Sbjct: 185 ARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKID--KTLEKA 242

Query: 237 YNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDL 276
           Y P+E         PF       ++  +  V G +  F++
Sbjct: 243 YVPEEEVLKLIADTPFPAN-ISIAISHSIFVKGDQTNFEI 281

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 82.4 bits (204), Expect = 1e-18
 Identities = 37/232 (15%), Positives = 64/232 (27%), Gaps = 48/232 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKD 60
           G + F+G  L    +  G +VT   R    I  +                L + K D   
Sbjct: 11  GASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEH-------------LKVKKADVSS 57

Query: 61  YDFVKSSLSAKGFDVVY---DINGREADEVEPILDALPNL---------EQFIYCSSAGV 108
            D V      KG D V    +      D  +  +     +          +F+    AG 
Sbjct: 58  LDEVCEVC--KGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGS 115

Query: 109 YLKSDLLPH-----------CESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVE 157
              +  L                +  G+     +++ K ++W    P     P       
Sbjct: 116 LFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPG------ 169

Query: 158 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 209
                       + +   G        V+D A A +  L + K  ++ F I 
Sbjct: 170 VRTGRYRLGKDDMIVDIVGNSHI---SVEDYAAAMIDELEHPKHHQERFTIG 218

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 84.2 bits (209), Expect = 1e-18
 Identities = 58/333 (17%), Positives = 97/333 (29%), Gaps = 78/333 (23%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           G   FIG  L   L+K    V     F+ G       L         E  S+   ++GD 
Sbjct: 32  GVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQY---NLDEVKTLVSTEQWSRFCFIEGDI 88

Query: 59  KDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPNL----------- 97
           +D    +  +  KG D V            I        +PI     N+           
Sbjct: 89  RDLTTCEQVM--KGVDHVLHQAALGSVPRSIV-------DPITTNATNITGFLNILHAAK 139

Query: 98  ----EQFIYCSSAGVYLKSDLLPHCESRHKG--------KLNTESVLES----KGVNWTS 141
               + F Y +S+  Y     LP  E             K   E   +      G     
Sbjct: 140 NAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIG 199

Query: 142 LRPVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 196
           LR   ++G        Y  V   +   +  G  + I G G       ++ ++ +  +   
Sbjct: 200 LRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSA 259

Query: 197 -GNEKASRQVFNISGEKYVT----FDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFP 251
              + A   ++N++     T       +           +  + +               
Sbjct: 260 LAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYR-------------E 306

Query: 252 FRD---QHFFASVEKAKHVLGWKPEFDLVEGLA 281
           FR    +H  A V KA  +L ++P   + EGL 
Sbjct: 307 FRSGDVRHSQADVTKAIDLLKYRPNIKIREGLR 339

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 83.8 bits (208), Expect = 1e-18
 Identities = 54/317 (17%), Positives = 90/317 (28%), Gaps = 65/317 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG   +G  L    + +GH++ +   F  GK    + LP  +     E         G  
Sbjct: 27  GGAGCLGSNLIEHWLPQGHEILVIDNFATGKR---EVLPPVAGLSVIE---------GSV 74

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-------LE--------QFIYC 103
            D   ++ +  +     V        D  +   DA  N        +        + +  
Sbjct: 75  TDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNF 134

Query: 104 SSAGVYLKSDLLPHCESRHKG--------KLNTESVLESKGVNWTSLRPVYIYGP---LN 152
            +A  Y +   +P                K   E+ L    V   SLR   + GP   + 
Sbjct: 135 QTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDVPVVSLRLANVTGPRLAIG 194

Query: 153 YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGE 211
             P    F+ RLKAG+          V     + D        L   + +  VFN+ +GE
Sbjct: 195 PIPT---FYKRLKAGQKCFC---SDTVRDFLDMSDFLAIADLSLQEGRPTG-VFNVSTGE 247

Query: 212 KYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRD---QHFFASVEKAKHVL 268
            +   + +        G    E V                              K +   
Sbjct: 248 GHSIKE-VFDVVLDYVGATLAEPVPVVAP------------GADDVPSVVLDPSKTETEF 294

Query: 269 GWKPEFDLVEGLADSYN 285
           GWK + D  + +     
Sbjct: 295 GWKAKVDFKDTITGQLA 311

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 83.9 bits (208), Expect = 2e-18
 Identities = 57/340 (16%), Positives = 101/340 (29%), Gaps = 90/340 (26%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
           GG  F+G  L + L++ G +QV     L +  K  +        D     F       + 
Sbjct: 39  GGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP-------DHPAVRF------SET 85

Query: 57  DRKDYDFVKSSLSAKGFDVVYDINGREADEV-------EPILDALPN-------LEQ--- 99
              D   + S      +D V+      A          +P+ D   N        E+   
Sbjct: 86  SITDDALLASLQ--DEYDYVF----HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKH 139

Query: 100 ------FIYCSSAGVYLKSDLLPHCESRHKGKLNTESVL----ESK-------------- 135
                  +Y ++     +        +     ++  +       SK              
Sbjct: 140 FKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH 199

Query: 136 GVNWTSLRPVYIYGPLNYNPVEEW--------------FFHRLKAGRPIPIPGSGIQVTQ 181
            +     R   +YGP        W              F ++   G P+P+   G+    
Sbjct: 200 QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRD 259

Query: 182 LGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKE 241
              V+D+A   +     +     V+NI+  K  +   LA    +  G    EL     + 
Sbjct: 260 FIFVEDVANGLIACA-ADGTPGGVYNIASGKETSIADLATKINEITG-NNTELDRLPKRP 317

Query: 242 FDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLA 281
           +D              F S EKA+  LG+  +  + +GL 
Sbjct: 318 WD---------NSGKRFGSPEKARRELGFSADVSIDDGLR 348

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 79.7 bits (197), Expect = 6e-18
 Identities = 33/223 (14%), Positives = 67/223 (30%), Gaps = 39/223 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G+      V+ G++VT+  R  + +  + P       A        + GD    
Sbjct: 10  GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-----RPAHV------VVGDVLQA 58

Query: 62  DFVKSSLSAKGFDVVYDING--READEVEPILDALPNL---------EQFIYCSSAGVYL 110
             V  ++   G D V  + G   +      + +   N+         ++ + C+SA +  
Sbjct: 59  ADVDKTV--AGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLW 116

Query: 111 KSDLLPHCESR-HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 169
               +P          +    VL   G+ + ++ P      +   P+             
Sbjct: 117 DPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMP----PHIGDQPLTG----AYTVTLD 168

Query: 170 IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK 212
              P   I         DL    ++ L  ++        S + 
Sbjct: 169 GRGPSRVI------SKHDLGHFMLRCLTTDEYDGHSTYPSHQY 205

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 80.9 bits (200), Expect = 9e-18
 Identities = 55/302 (18%), Positives = 94/302 (31%), Gaps = 61/302 (20%)

Query: 3   GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG--------ESDQEFAEFSSKILHL 54
           G   +G+ L+R L  +GH+VT   R   P+   +          ++         +IL  
Sbjct: 10  GCGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVY 69

Query: 55  KGDRKDYDFVKSSLSA-KGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVY-- 109
                        ++A +  D  Y ++  E   +   L AL    L+   + SS GVY  
Sbjct: 70  ------------CVAASEYSDEHYRLSYVEG--LRNTLSALEGAPLQHVFFVSSTGVYGQ 115

Query: 110 ------LKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 163
                  +       +   K  L  E++L     + T LR   IYGP     +      +
Sbjct: 116 EVEEWLDEDTPPIAKDFSGKRMLEAEALLA--AYSSTILRFSGIYGPGRLRMIR-----Q 168

Query: 164 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVTFDGLAR 221
            +     P        T   H  D A     ++         +++ ++  + +    L R
Sbjct: 169 AQTPEQWPARN---AWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLR 225

Query: 222 ACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF-DLVEGL 280
             A   G   P            G KK           S  +     G++  + D V G 
Sbjct: 226 WLADRQGIAYPAGA----TPPVQGNKK----------LSNARLLA-SGYQLIYPDYVSGY 270

Query: 281 AD 282
             
Sbjct: 271 GA 272

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 78.9 bits (194), Expect = 2e-17
 Identities = 37/232 (15%), Positives = 63/232 (27%), Gaps = 47/232 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  +       GH+VT   R    I Q                I  L+ D  D 
Sbjct: 7   GATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKD------------INILQKDIFDL 54

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL---------EQFIYCSSAGVYLKS 112
                       +VV D  G   DE E  + +L +L          + +    A      
Sbjct: 55  T----LSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQID 110

Query: 113 -------------DLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEW 159
                        +   +  +R + K            +WT + P  ++ P       E 
Sbjct: 111 EDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEP------GER 164

Query: 160 FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 211
                     +     G        ++D A A +  +       + F ++G+
Sbjct: 165 TGDYQIGKDHLLFGSDGNSFI---SMEDYAIAVLDEIERPNHLNEHFTVAGK 213

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 80.3 bits (198), Expect = 2e-17
 Identities = 48/284 (16%), Positives = 98/284 (34%), Gaps = 16/284 (5%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKD 60
           G T  IG  +    +K G+      R    I    P   ++    + S  ++ L+GD  D
Sbjct: 9   GPTGAIGRHIVWASIKAGNPTYALVR--KTITAANPETKEELIDNYQSLGVILLEGDIND 66

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPIL----DALPNLEQFIYCSSAGVYLKSDLLP 116
           ++ +  ++  K  D+V    GR   E +  +        N+++F          + D + 
Sbjct: 67  HETLVKAI--KQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHDAVE 124

Query: 117 HCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSG 176
                 + K +   V+E++GV +T L      G   +                + I G G
Sbjct: 125 PVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTG--YFLRNLAQLDATDPPRDKVVILGDG 182

Query: 177 IQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKAAGFPEPELV 235
                     D+    ++   +     +  +I   K Y+T + +     K  G    E  
Sbjct: 183 NVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIG-KTLEKT 241

Query: 236 HYNPKEF-DFGKKKAFP--FRDQHFFASVEKAKHVLGWKPEFDL 276
           + + ++     ++ +FP  +    + +   K   V    P  D+
Sbjct: 242 YVSEEQVLKDIQESSFPHNYLLALYHSQQIKGDAVYEIDPAKDI 285

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 78.9 bits (195), Expect = 8e-17
 Identities = 55/327 (16%), Positives = 108/327 (33%), Gaps = 73/327 (22%)

Query: 2   GGTRFIGVFLSRLLVKEG--HQVTL---FTRGKAPIAQQLPGESD-QEFAEFSSKILHLK 55
           GG  F+G  L+    +     +V +   F         +       +    F  +++   
Sbjct: 17  GGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVI--A 74

Query: 56  GDRKDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE------------- 98
            D  +   ++  L    FD ++      +    +     L    N +             
Sbjct: 75  ADINNPLDLRR-LEKLHFDYLFHQAAVSDTTMLN---QELVMKTNYQAFLNLLEIARSKK 130

Query: 99  -QFIYCSSAGVYLKSDLLPHCESRHKG--------KLNTESVL--ESKGVNWTSLRPVY- 146
            + IY SSAGVY  +   P+   +++         KL  +  +   S       LR  Y 
Sbjct: 131 AKVIYASSAGVYGNTKA-PNVVGKNESPENVYGFSKLCMDEFVLSHSNDNVQVGLR--YF 187

Query: 147 -IYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQ----VTQLGHVKDLARAFVQVL 196
            +YGP          +         A + + +   G Q    V    +++D+ +A V+ +
Sbjct: 188 NVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFV----YIEDVIQANVKAM 243

Query: 197 GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQH 256
             +K+   V+N+   +  +++ +     +  G  +      NP  F            Q 
Sbjct: 244 KAQKS--GVYNVGYSQARSYNEIVSILKEHLGDFKVT-YIKNPYAFF-----------QK 289

Query: 257 F-FASVEKAKHVLGWKPEFDLVEGLAD 282
              A +E     L + P +DL  G+ D
Sbjct: 290 HTQAHIEPTILDLDYTPLYDLESGIKD 316

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 75.8 bits (186), Expect = 2e-16
 Identities = 30/222 (13%), Positives = 69/222 (31%), Gaps = 36/222 (16%)

Query: 2   GGTRFIG-VFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G    I     + LL      +TL+ R                      ++  ++G  ++
Sbjct: 12  GAAGQIAQXLTATLLTYTDMHITLYGRQ--------LKTRIPPEIIDHERVTVIEGSFQN 63

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHC 118
              ++ ++     +VV+        ++  I+ AL   N+ + I  S AG+  +  +    
Sbjct: 64  PGXLEQAV--TNAEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALEK 121

Query: 119 ESR-------HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 171
            +         +G+    +VL    +N+T LR  ++Y        E              
Sbjct: 122 WTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDPEXTDYEL-------IPEGAQ 174

Query: 172 IPGSGIQVTQLGHVKDLARAFVQVLGNEKAS---RQVFNISG 210
              + +        + + +A   +L     +   R    +  
Sbjct: 175 FNDAQV------SREAVVKAIFDILHAADETPFHRTSIGVGE 210

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 77.2 bits (191), Expect = 2e-16
 Identities = 52/322 (16%), Positives = 90/322 (27%), Gaps = 67/322 (20%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           GG  FIG  + + L  +G   + +      G                 + +      K D
Sbjct: 6   GGAGFIGSNIVKALNDKGITDILVVDNLKDG----------TKFVNLVDLNIADYMDKED 55

Query: 58  RKDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE--------------Q 99
                           + ++      +  E D  + ++D   N +               
Sbjct: 56  FLIQIMAGEEF--GDVEAIFHEGACSSTTEWDG-KYMMDN--NYQYSKELLHYCLEREIP 110

Query: 100 FIYCSSAGVYLKSDLLPHCESRHKGKLN------------TESVLESKGVNWTSLRPVYI 147
           F+Y SSA  Y            ++  LN               +L          R   +
Sbjct: 111 FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNV 170

Query: 148 YGP-----LNYNPVEEWFFHRLKAGRPIPI-PGSGIQVTQLGHVKDLARAFVQVLGNEKA 201
           YGP      +   V      +L  G    +  GS        +V D+A   +  L  E  
Sbjct: 171 YGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFL--ENG 228

Query: 202 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHF-FAS 260
              +FN+   +  +F  +A A        + E   Y P       +       Q F  A 
Sbjct: 229 VSGIFNLGTGRAESFQAVADATLAYHKKGQIE---YIPFPDKLKGR------YQAFTQAD 279

Query: 261 VEKAKHVLGWKPEFDLVEGLAD 282
           +   +     KP   + EG+ +
Sbjct: 280 LTNLRAAGYDKPFKTVAEGVTE 301

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 76.9 bits (189), Expect = 3e-16
 Identities = 33/261 (12%), Positives = 86/261 (32%), Gaps = 18/261 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT +IG  +    +  GH   +  R    ++     +    F +  +K++  +    D+
Sbjct: 11  GGTGYIGKRIVNASISLGHPTYVLFR-PEVVSNIDKVQMLLYFKQLGAKLI--EASLDDH 67

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVE-----PILDA---LPNLEQFIYCSSAGVYLKSD 113
             +  +L  K  DVV                  +++A     N+++F+           +
Sbjct: 68  QRLVDAL--KQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIME 125

Query: 114 L-LPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 172
             L         K      +E+  + +T +      G      + +   H +     + I
Sbjct: 126 HALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYF-AGSLAQLDGHMMPPRDKVLI 184

Query: 173 PGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKAAGFPE 231
            G G          D+    ++ + + +   +   I      ++   + +   + +    
Sbjct: 185 YGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSE-QN 243

Query: 232 PELVHYNPKEF-DFGKKKAFP 251
            + ++ + ++F    K K++ 
Sbjct: 244 LDKIYISSQDFLADMKDKSYE 264

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 75.4 bits (186), Expect = 1e-15
 Identities = 40/206 (19%), Positives = 62/206 (30%), Gaps = 38/206 (18%)

Query: 100 FIYCSSAGVYLKSDLLPHCESRHKGKLN------------TESVLESKGVNWTSLRPVYI 147
           F+Y SSA  Y            ++  LN               +L          R   +
Sbjct: 158 FLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNV 217

Query: 148 YGP-----LNYNPVEEWFFHRLKAG-RPIPIPGSGIQ----VTQLGHVKDLARAFVQVLG 197
           YGP      +   V      +L  G  P    GS       V    +V D+A   +  L 
Sbjct: 218 YGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFV----YVGDVADVNLWFL- 272

Query: 198 NEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHF 257
            E     +FN+   +  +F  +A A        + E   Y P       +       Q F
Sbjct: 273 -ENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIE---YIPFPDKLKGR------YQAF 322

Query: 258 -FASVEKAKHVLGWKPEFDLVEGLAD 282
             A +   +     KP   + EG+ +
Sbjct: 323 TQADLTNLRAAGYDKPFKTVAEGVTE 348

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 73.8 bits (181), Expect = 3e-15
 Identities = 53/291 (18%), Positives = 91/291 (31%), Gaps = 40/291 (13%)

Query: 6   FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK 65
           +    LSR L  +G ++   +R           +  +      ++ L   G+    D V 
Sbjct: 15  YTARVLSRALAPQGWRIIGTSRNP---------DQMEAIRASGAEPLLWPGEEPSLDGVT 65

Query: 66  SSLSA----KGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSD-------- 113
             L +     G D V    G +      I           Y S+  VY   D        
Sbjct: 66  HLLISTAPDSGGDPVLAALGDQ------IAARAAQFRWVGYLSTTAVYGDHDGAWVDETT 119

Query: 114 -LLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 172
            L P         +  +       +     R   IYGP    P       +L  G    I
Sbjct: 120 PLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGP-GRGPFS-----KLGKGGIRRI 173

Query: 173 PGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEP 232
                QV    HV+D+A+     +        V+N+  ++ V    +    A+  G P P
Sbjct: 174 IK-PGQVFSRIHVEDIAQVLAASMARPDPGA-VYNVCDDEPVPPQDVIAYAAELQGLPLP 231

Query: 233 ELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF-DLVEGLAD 282
             V ++  +       A  F  ++     ++ K  LG + ++ +   GL  
Sbjct: 232 PAVDFDKADLT---PMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEA 279

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 73.7 bits (182), Expect = 4e-15
 Identities = 69/333 (20%), Positives = 113/333 (33%), Gaps = 83/333 (24%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  +   L+  G +V +      GK    + +P         F       + D 
Sbjct: 7   GGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---ENVPKG-----VPF------FRVDL 52

Query: 59  KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
           +D + V+ +        V       + + + E +P+LD   N       LE        +
Sbjct: 53  RDKEGVERAFREFRPTHVSHQAAQASVKVSVE-DPVLDFEVNLLGGLNLLEACRQYGVEK 111

Query: 100 FIYCSSAG-VY-LKSDLLPHCESRHK--------GKLNTESVLES----KGVNWTSLRPV 145
            ++ S+ G +Y    +     E+            K   E  L       G+ W SLR  
Sbjct: 112 LVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYG 171

Query: 146 YIYGPLNYNPVEE-----WFFHRLKAGRPIPI-----PGSGIQVTQLGHVKDLARAFVQV 195
            +YGP   +P  E      F  R+  G P+ +     PG    V    +V D+A A    
Sbjct: 172 NVYGP-RQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALA 230

Query: 196 LGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRD- 254
           L    +   ++N+   +  T   +  A A+AAG      V   P             R  
Sbjct: 231 L---FSLEGIYNVGTGEGHTTREVLMAVAEAAGKAPE--VQPAPP------------RPG 273

Query: 255 --QHFFASVEKAKHVLGWKPEFDLVEGLADSYN 285
             +    S  K     GW+P+    EG+  + +
Sbjct: 274 DLERSVLSPLKLM-AHGWRPKVGFQEGIRLTVD 305

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 72.3 bits (178), Expect = 1e-14
 Identities = 48/325 (14%), Positives = 91/325 (28%), Gaps = 71/325 (21%)

Query: 2   GGTRFIGVFLSRLLVKE-GHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           G    IG  L++ L K  G +  +     +    +    P                   +
Sbjct: 9   GACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGP---------------FEVVN 53

Query: 58  RKDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNL---------------EQ 99
             D++ ++  +       +Y    +    A E  P      N+               ++
Sbjct: 54  ALDFNQIEHLVEVHKITDIYLMAALLSATA-EKNPAFAWDLNMNSLFHVLNLAKAKKIKK 112

Query: 100 FIYCSSAGVYLKSDLLPHCESRHKG---------KLNTESVLESK----GVNWTSLRPVY 146
             + SS  V+  +    +                K   E   E      GV+  S+R   
Sbjct: 113 IFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPG 172

Query: 147 IYGPLN-----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL---GN 198
           +                  F++  A +      S      + ++ D   A + ++     
Sbjct: 173 LISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVE 232

Query: 199 EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPEL-VHYNPKEFDFGKKKAFPFRDQHF 257
           +      +N++   + T   +A    K      PE  + Y P   DF +K A        
Sbjct: 233 KIKIHSSYNLAAMSF-TPTEIANEIKKH----IPEFTITYEP---DFRQKIA---DSWPA 281

Query: 258 FASVEKAKHVLGWKPEFDLVEGLAD 282
                +A+    WK  FDL     D
Sbjct: 282 SIDDSQAREDWDWKHTFDLESMTKD 306

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 71.2 bits (175), Expect = 1e-14
 Identities = 26/225 (11%), Positives = 64/225 (28%), Gaps = 46/225 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +  +L   L  +GH+     R +     +L      +          +  + ++ 
Sbjct: 28  GANGKVARYLLSELKNKGHEPVAMVRNEEQ-GPELRERGASDI---------VVANLEE- 76

Query: 62  DFVKSSLSA--KGFDVVYDING--READEVEP----------ILDA--LPNLEQFIYCSS 105
                  S      D V    G        +            +       +++FI  SS
Sbjct: 77  -----DFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131

Query: 106 AGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK 165
            G         +       K   +  L+   +++T +RP                 +   
Sbjct: 132 VGTVDPDQGPMNMRHYLVAKRLADDELKRSSLDYTIVRPG-------------PLSNEES 178

Query: 166 AGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 210
            G+ + +     ++T+     D+A+   +++  +    + F +  
Sbjct: 179 TGK-VTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLN 222

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 71.5 bits (175), Expect = 3e-14
 Identities = 40/230 (17%), Positives = 87/230 (37%), Gaps = 11/230 (4%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT +IG F+ R  +   H   ++ R   P +     +  +EF      I  ++G+ +++
Sbjct: 11  GGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTI--IEGEMEEH 68

Query: 62  DFVKSSLSAKGFDVVYD-INGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDLLPH 117
           + + S L  K  D+V   +          I++A+    N+++F+         +   LP 
Sbjct: 69  EKMVSVL--KQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLPP 126

Query: 118 CESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGI 177
            ES  + K      +E+  + +T +             +             I I G+G 
Sbjct: 127 FESVLEKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPH--PNRNDDIVIYGTGE 184

Query: 178 QVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKA 226
               L + +D+A+  ++V  + +   ++      K  ++ + L       
Sbjct: 185 TKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAK 234

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 71.1 bits (174), Expect = 3e-14
 Identities = 40/234 (17%), Positives = 87/234 (37%), Gaps = 27/234 (11%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTR---GKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GGT +IG  + +  +K GH   +FTR    K  +  +            S   + +KG+ 
Sbjct: 18  GGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQ----------SLGAIIVKGEL 67

Query: 59  KDYDFVKSSLSAKGFDVVYD-INGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDL 114
            +++ +   +  K  DVV   +   +  +   IL+A+    N+++F+         + + 
Sbjct: 68  DEHEKLVELM--KKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINA 125

Query: 115 LPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 174
           LP  E+  + K      +E   + +T +                +          I + G
Sbjct: 126 LPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYF-----INYLLRPYDPKDEITVYG 180

Query: 175 SGIQVTQLGHVKDLARAFVQVLGNEKASRQ--VFNISGEKYVTFDGLARACAKA 226
           +G     + + +D+    ++V  + +A  +  ++  S    +T   L     K 
Sbjct: 181 TGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNI-ITQLELISRWEKK 233

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 71.2 bits (175), Expect = 4e-14
 Identities = 64/358 (17%), Positives = 110/358 (30%), Gaps = 75/358 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT-LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G   FI   ++R L  EGH V     +    + + +      EF            D + 
Sbjct: 36  GAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMF---CDEF---------HLVDLRV 83

Query: 61  YDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNL---------------EQFI 101
            +        +G D V+    D+ G    +    +    N                ++F 
Sbjct: 84  MENCLKVT--EGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFF 141

Query: 102 YCSSAGVYLKSDLLPHCESRHK---------------GKLNTESVL----ESKGVNWTSL 142
           Y SSA +Y +   L       K                KL TE +     +  G+     
Sbjct: 142 YASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIG 201

Query: 143 RPVYIYGP-LNYNPVEEW----FFHR-LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 196
           R   IYGP   +    E     F  +   +     + G G+Q      + +     +++ 
Sbjct: 202 RFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT 261

Query: 197 GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQH 256
             +   R+  NI  ++ V+ + +A           P  +H+ P               + 
Sbjct: 262 --KSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLP--IHHIPGPEG----------VRG 307

Query: 257 FFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADFSTDDMILGKKLVLQA 314
             +     K  LGW P   L EGL  +Y     +    KE    +D  + G   V+  
Sbjct: 308 RNSDNNLIKEKLGWAPNMRLKEGLRITYF-WI-KEQIEKEKAKGSDVSLYGSSKVVGT 363

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 69.4 bits (170), Expect = 4e-14
 Identities = 40/221 (18%), Positives = 84/221 (38%), Gaps = 39/221 (17%)

Query: 2   GGTRFIGVFL-SRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G    I   + ++L  K+  + TLF R  A I +  P           +    + GD  +
Sbjct: 30  GAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-----------TNSQIIMGDVLN 78

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEP--ILDALP--NLEQFIYCSSAGVYLKSDLLP 116
           +  +K ++  +G D+VY     E  +++   ++ A+   ++++ I+  S G+Y +     
Sbjct: 79  HAALKQAM--QGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKF 136

Query: 117 HCESRH------KGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI 170
              +        K        +E+ G+ +T LRP +    L    + ++        R  
Sbjct: 137 VEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAW----LTDEDIIDYEL----TSRNE 188

Query: 171 PIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISG 210
           P  G+ +        K +A     ++   EK   +   I+ 
Sbjct: 189 PFKGTIV------SRKSVAALITDIIDKPEKHIGENIGINQ 223

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 69.1 bits (170), Expect = 1e-13
 Identities = 49/327 (14%), Positives = 90/327 (27%), Gaps = 91/327 (27%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           GG  FIG  L+R LV  G +VT    L      P                      L+  
Sbjct: 14  GGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGK---------------FLEKP 58

Query: 58  RKDYDFVKSSLSAKGFDVVY--------------------DING--------READEVEP 89
               +  +  L      +VY                    +++                 
Sbjct: 59  V--LELEERDL--SDVRLVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSV----- 109

Query: 90  ILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKG--------KLNTESVLES-----KG 136
                  + + +  S+  VY ++D LP  E             K+  E V  +       
Sbjct: 110 ------GVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVA 163

Query: 137 VNWTSLRPVYIYGP-LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 195
                +R   +YGP    + +       L     +P+ G G Q     ++ D+    V +
Sbjct: 164 PEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVAL 223

Query: 196 LGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQ 255
               +    V N    + ++ + + R     +     E+    P+  +            
Sbjct: 224 A--NRPLPSVVNFGSGQSLSVNDVIRILQATSP--AAEVARKQPRPNE----------IT 269

Query: 256 HFFASVEKAKHVLGWKP-EFDLVEGLA 281
            F A        +G +     + EG+ 
Sbjct: 270 EFRADTALQTRQIGERSGGIGIEEGIR 296

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 68.6 bits (167), Expect = 3e-13
 Identities = 60/358 (16%), Positives = 105/358 (29%), Gaps = 90/358 (25%)

Query: 2   GGTRFIGVFLSRLLVKEGH-----QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
           G T  IG  L+ +L          +V    R   P   +               I +++ 
Sbjct: 8   GVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNP------------INYVQC 55

Query: 57  DRKDYDFVKSSLSAKG-----FDVVYDINGREADEVEP-------ILDAL----PNLEQF 100
           D  D D  ++ LS        F V +     E +  E        +LDA+    PNL+  
Sbjct: 56  DISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHI 115

Query: 101 IYCSSAGVY---------LKSDLLPHCES--RHKGKLN--------TESVLESKGVNWTS 141
              +    Y         ++S   P+ E   R K             E V + +G+ W+ 
Sbjct: 116 SLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSV 175

Query: 142 LRPVYIYGPLNYNPVEEWFFHRLKA------GRPIPIPGSGIQVTQLGHVKD---LARAF 192
            RP  I+G   Y+ +       + A      G+ +   G            D   +A   
Sbjct: 176 HRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHH 235

Query: 193 VQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPEL---VHYNPKEFDFGKKKA 249
           +    +  A  + FN+S      +    +  A+  G    E    V    ++   GK+  
Sbjct: 236 IWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPV 295

Query: 250 -------------------------FPFRDQHFFASVEKAKHVLGWKPEFDLVEGLAD 282
                                        ++ F  S+ K+K   G+    +       
Sbjct: 296 WEEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKE-HGFLGFRNSKNAFIS 352

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 66.6 bits (163), Expect = 1e-12
 Identities = 47/334 (14%), Positives = 83/334 (24%), Gaps = 76/334 (22%)

Query: 2   GGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL 54
           G    +G  L++ LVK+G        + TL    +        G       +        
Sbjct: 21  GAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGA-----VDA------R 69

Query: 55  KGDRKDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNLE------------- 98
             D       +  L     DV++    I   EA E++       NL+             
Sbjct: 70  AADLSAPGEAEK-LVEARPDVIFHLAAIVSGEA-ELDFDKGYRINLDGTRYLFDAIRIAN 127

Query: 99  -------QFIYCSSAGVYLKSDLLPHCESRHK--------GKLNTESVLES----KGVNW 139
                  + ++ SS  V+      P  +  H          K   E +L         + 
Sbjct: 128 GKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDG 187

Query: 140 TSLRPVYIYGPL--------NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA 191
             +R   I             +             G+   +P            +     
Sbjct: 188 IGIRLPTICIRPGKPNAAASGFFSN---ILREPLVGQEAVLPVPESIRHWHASPRSAVGF 244

Query: 192 FVQVL---GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKK 248
            +        +   R+  ++ G    T      A  K AG     L+   P   +    +
Sbjct: 245 LIHGAMIDVEKVGPRRNLSMPGLSA-TVGEQIEALRKVAGEKAVALIRREP---NEMIMR 300

Query: 249 AFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLAD 282
                   F A   +    LG+  E    E +  
Sbjct: 301 MCEGWAPGFEAKRARE---LGFTAESSFEEIIQV 331

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 65.4 bits (159), Expect = 3e-12
 Identities = 33/230 (14%), Positives = 77/230 (33%), Gaps = 11/230 (4%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T FIG F++   +       +  R           +  +   +  + I  + G   + 
Sbjct: 17  GATGFIGQFVATASLDAHRPTYILARPGPRSPS--KAKIFKALEDKGAII--VYGLINEQ 72

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPIL----DALPNLEQFIYCSSAGVYLKSDLLPH 117
           + ++  L     D+V    G E+   +  L     A+  +++F+         ++D +  
Sbjct: 73  EAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVNRADPVEP 132

Query: 118 CESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGI 177
             + ++ K     ++E  G+ +T +    I     YN +       L       I G G 
Sbjct: 133 GLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIH--PSEVLPPTDFFQIYGDGN 190

Query: 178 QVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKA 226
                    D+ +  ++ + + +   +  +       +  + LA    K 
Sbjct: 191 VKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKK 240

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 63.9 bits (156), Expect = 3e-12
 Identities = 29/228 (12%), Positives = 71/228 (31%), Gaps = 51/228 (22%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T  +G  L + L    +Q+    R K     Q                  +K    D 
Sbjct: 7   GSTGRVGKSLLKSLSTTDYQIYAGAR-KVEQVPQYNN---------------VKAVHFDV 50

Query: 62  DFVKSSLSA--KGFDVVYDINGREADEVEPI-LDALPNL---------EQFIYCSSAGVY 109
           D+    ++    G D + +++G     +  + L     L         ++FI  S+    
Sbjct: 51  DWTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSL 110

Query: 110 LKSDLLPHCESR----HKGKLNTESVL-ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL 164
                +          +  K   +  L +   +++T ++P  +                 
Sbjct: 111 QPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQPGALTE--------------- 155

Query: 165 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGE 211
                  +     +V+    + D+A    +++  + +  +V ++ +G+
Sbjct: 156 --EEATGLIDINDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGK 201

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 65.6 bits (160), Expect = 3e-12
 Identities = 63/371 (16%), Positives = 112/371 (30%), Gaps = 103/371 (27%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQL----PGESDQEFAEFSSKILH- 53
           GG  + G   +  L K+ ++V +     R        L    P  S  +       +   
Sbjct: 18  GGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGK 77

Query: 54  ----LKGDRKDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPN--- 96
                 GD  D++F+  S  +   D V          Y +  R       +     N   
Sbjct: 78  SIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRS----RAVYTQHNNVIG 133

Query: 97  ----LE---------QFIYCSSAGVY-----------------LKSDLLPHCESR----H 122
               L            +   + G Y                  ++D LP+ +      H
Sbjct: 134 TLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYH 193

Query: 123 KGKLNTESVL----ESKGVNWTSLRPVYIYGP--------------LNYNPVEEW----F 160
             K++    +    ++ G+  T L    +YG               L+Y+ V       F
Sbjct: 194 LSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRF 253

Query: 161 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ--VFNISGEKYVTFDG 218
             +   G P+ + G G Q      ++D  +     + N   + +  VFN   E++   + 
Sbjct: 254 CVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNE- 312

Query: 219 LARACAKAA---GFPEPELVHYNP-KEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF 274
           LA    KA    G    ++   NP  E +          + ++ A   K    LG +P +
Sbjct: 313 LASLVTKAGSKLGLDVKKMTVPNPRVEAE----------EHYYNAKHTKLME-LGLEPHY 361

Query: 275 DLVEGLADSYN 285
                L    N
Sbjct: 362 LSDSLLDSLLN 372

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 61.0 bits (148), Expect = 4e-11
 Identities = 33/269 (12%), Positives = 66/269 (24%), Gaps = 70/269 (26%)

Query: 2   GGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G +   G  + + L +           R  A   +++ GE+D              GD  
Sbjct: 11  GASGRTGQIVYKKLKEGSDKFVAKGLVR-SAQGKEKIGGEADV-----------FIGDIT 58

Query: 60  DYDFVKSSLSAKGFDVVYDINGREADEVEPILDALP------------------------ 95
           D D +  +   +G D +  +                                        
Sbjct: 59  DADSINPAF--QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQ 116

Query: 96  -------NLEQFIYCSSAGV------YLKSDLLPHCESRHKGKLNTESVLESKGVNWTSL 142
                   ++  +   S G         K         + K     E  L   G  +T +
Sbjct: 117 IDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRK----AEQYLADSGTPYTII 172

Query: 143 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 202
           R   +                L  G+   +  +  +        D+A   +Q L  E+A 
Sbjct: 173 RAGGLLDKEGG-------VRELLVGKDDELLQTDTKTV---PRADVAEVCIQALLFEEAK 222

Query: 203 RQVFNISGEKYVT---FDGLARACAKAAG 228
            + F++  +   T           ++   
Sbjct: 223 NKAFDLGSKPEGTSTPTKDFKALFSQVTS 251

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 61.0 bits (148), Expect = 1e-10
 Identities = 42/270 (15%), Positives = 81/270 (30%), Gaps = 36/270 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T   G  L R+    GH V       K  IA++L    +             +G   +
Sbjct: 12  GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLF---------QGPLLN 62

Query: 61  YDFVKSSLSA--KGFDVVYDI-NGREADEVE---PILDA---LPNLEQFIYCSSAGVYLK 111
                  +    +G  + +     +  DE+     + DA      ++ +IY SS   +  
Sbjct: 63  ---NVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIY-SSMPDHSL 118

Query: 112 SDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR--- 168
               P        K   E+ +   G+  T +            P   +    +  G    
Sbjct: 119 YGPWPAVPM-WAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEW 177

Query: 169 PIPIPGSGIQVTQLGHVKDLARAFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKA 226
             P       +  L    D+  A +Q+  +  +K +     ++ E  ++   +  A ++A
Sbjct: 178 HAPFDPDI-PLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFE-TLSPVQVCAAFSRA 235

Query: 227 AGFPEPELVHYNPKEFD-FGKKKAFPFRDQ 255
                   V Y               +R+Q
Sbjct: 236 LNRR----VTYVQVPKVEIKVNIPVGYREQ 261

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 58.9 bits (142), Expect = 2e-10
 Identities = 28/233 (12%), Positives = 55/233 (23%), Gaps = 49/233 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  +     + GH+V    R     A    G +                 ++  
Sbjct: 7   GATGRAGSAIVAEARRRGHEVLAVVRDPQKAA-DRLGATVAT------------LVKEPL 53

Query: 62  DFVKSSLSAKGFDVVYDING---------READEVEPILDAL--PNLEQFIYCSSAGVYL 110
              ++ L     D V D               D    ++  L   +        SA + +
Sbjct: 54  VLTEADL--DSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAM 111

Query: 111 KSD---------LLPHCESRHKGKLNTES----VLESKGVNWTSLRPVYIYGPLNYNPVE 157
                            +  + G L        +  +  VNW  + P   +         
Sbjct: 112 PGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPS------G 165

Query: 158 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 210
               +       +        +       ++A A +  L +  A R    +  
Sbjct: 166 PATSYVAGKDTLLVGEDGQSHI----TTGNMALAILDQLEHPTAIRDRIVVRD 214

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 55.2 bits (133), Expect = 4e-09
 Identities = 43/241 (17%), Positives = 82/241 (34%), Gaps = 33/241 (13%)

Query: 2   GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G +   G  L + ++++G   +VTL  R K    ++     +QE  +F  K+       +
Sbjct: 25  GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFE-KLDDYASAFQ 83

Query: 60  DYDFV-------KSSLSAKGFDVV-YDINGREADEVEPILDALPNLEQFIYCSSAGVYLK 111
            +D         +    A+GF  V  D   + A+  +         + F   SS G    
Sbjct: 84  GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-----GCKHFNLLSSKGADKS 138

Query: 112 SDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 171
           S+ L     + KG++    V E K   ++  RP  +      +   EW   +      +P
Sbjct: 139 SNFLY---LQVKGEVE-AKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKF--FGSLP 192

Query: 172 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPE 231
              +         V  + RA +  +   +           + +    +     KA G  +
Sbjct: 193 DSWASGHSV---PVVTVVRAMLNNVVRPRD-------KQMELLENKAIHD-LGKAHGSLK 241

Query: 232 P 232
           P
Sbjct: 242 P 242

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 54.3 bits (131), Expect = 1e-08
 Identities = 52/272 (19%), Positives = 92/272 (33%), Gaps = 52/272 (19%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVTLFTR-GKAPIAQQL--PGESDQEFAEFSSKILHLKGD 57
           GGT   G  ++R L+++G  +V + TR  +   A++L   G      AE       ++GD
Sbjct: 12  GGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQG------AEV------VQGD 59

Query: 58  RKDYDFVKSSLSAKGFDVVYDI-----NGREADEVE---PILDA--LPNLEQFIYCSSAG 107
           + D   ++ +L   G    + +     +  +  EV+    + D      L   +Y     
Sbjct: 60  QDDQVIMELAL--NGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLEN 117

Query: 108 VYLKSD---LLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL 164
           +   +       H +     K   E      GV  TS+R    +     N +  +   + 
Sbjct: 118 IKKLTAGRLAAAHFDG----KGEVEEYFRDIGVPMTSVRLPCYF----ENLLSHFLPQKA 169

Query: 165 KAGR----PIPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGL 219
             G+     +P     +       V DL    + +L   EK   Q   +S     T +  
Sbjct: 170 PDGKSYLLSLPTGDVPM---DGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTC-RHTAEEY 225

Query: 220 ARACAKAAGFPEPELVHYNPKEFDFGKKKAFP 251
           A    K         VH      +  +K  FP
Sbjct: 226 AALLTKHTRKV----VHDAKMTPEDYEKLGFP 253

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 54.4 bits (131), Expect = 1e-08
 Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 16/163 (9%)

Query: 135 KGVNWTSLRPVYIYGP---------LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV 185
           +G+N+T  RP    GP            + V   F   +  G  I +   G Q     +V
Sbjct: 189 EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYV 248

Query: 186 KDLARAFVQVLGNEK--ASRQVFNISGEKY-VTFDGLARACAKAAGFPEPELVHYNPKEF 242
            D   A ++++ N    A+ +++NI       +   LA    + A             + 
Sbjct: 249 DDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKL 308

Query: 243 DFGKKKAF---PFRD-QHFFASVEKAKHVLGWKPEFDLVEGLA 281
                 A+    ++D Q+    +E     LGW P+F   + L 
Sbjct: 309 VETTSGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALR 351

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 53.8 bits (130), Expect = 2e-08
 Identities = 42/310 (13%), Positives = 85/310 (27%), Gaps = 68/310 (21%)

Query: 11  LSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA 70
            ++ +        +  R    +     G+      +             DY   +S + A
Sbjct: 17  TNQAIANHIDHFHIGVRNVEKVPDDWRGKV--SVRQL------------DYFNQESMVEA 62

Query: 71  -KGFDVVYDINGREADEVEPILDALP--------NLEQFIYCSSAGVYLKSDLLPHCESR 121
            KG D V  I        + I +            +   I+         +         
Sbjct: 63  FKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYADQHNNPFHMSPY-- 120

Query: 122 HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQ 181
                    +L + G+++T +R         Y    + +   L     +  P    ++  
Sbjct: 121 FGY---ASRLLSTSGIDYTYVRMAM------YMDPLKPYLPELMNMHKLIYPAGDGRIN- 170

Query: 182 LGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKE 241
                D+AR  + ++ N     + + +SG  Y     LA   ++A+G      + Y P  
Sbjct: 171 YITRNDIARGVIAIIKNPDTWGKRYLLSGYSY-DMKELAAILSEASGTE----IKYEP-- 223

Query: 242 FDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADFST 301
                             S+E    +      F     LA  Y         R   D  +
Sbjct: 224 -----------------VSLETFAEMYDEPKGF--GALLASMY-----HAGARGLLDQES 259

Query: 302 DDM--ILGKK 309
           +D   ++  +
Sbjct: 260 NDFKQLVNDQ 269

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 51.5 bits (124), Expect = 8e-08
 Identities = 38/184 (20%), Positives = 64/184 (34%), Gaps = 33/184 (17%)

Query: 60  DYDFVKSSLSA-KGFDVVYDINGREADEVEPILDALPNLE--------QFIYCSSAGVYL 110
           DY+  +S   A  G   +  I+G   D    I+     ++           Y   A    
Sbjct: 53  DYNQPESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFA-E 111

Query: 111 KSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGR 168
           +S +       H     TE  + +  + +T LR         Y    V E      ++G 
Sbjct: 112 ESIIPLAHV--HLA---TEYAIRTTNIPYTFLRNAL------YTDFFVNEGLRASTESGA 160

Query: 169 PIPIPGSG----IQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA 224
            +   GSG    +         +LA A   VL  E    + +N+   +  TFD LA+  +
Sbjct: 161 IVTNAGSGIVNSV------TRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILS 214

Query: 225 KAAG 228
           + +G
Sbjct: 215 EVSG 218

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 40/218 (18%), Positives = 64/218 (29%), Gaps = 39/218 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G T   G  L   ++ E    +V    R       +L                       
Sbjct: 12  GATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQL-------DG 64

Query: 60  DYDFV--------KSSLSAKGFDVV-YDINGREADEVEPILDALPNLEQFIYCSSAGVYL 110
             D          K + S + F  V +D+                    ++  S+ G   
Sbjct: 65  SIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGK-----RALEMGARHYLVVSALGADA 119

Query: 111 KSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI 170
           KS +     +R KG+L  +++ E      T  RP  ++GP       E F        PI
Sbjct: 120 KSSIF---YNRVKGELE-QALQEQGWPQLTIARPSLLFGP------REEFRLAEILAAPI 169

Query: 171 --PIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 206
              +PG    +       DLARA  ++   E    +  
Sbjct: 170 ARILPGKYHGI----EACDLARALWRLALEEGKGVRFV 203

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 51.2 bits (123), Expect = 1e-07
 Identities = 31/165 (18%), Positives = 61/165 (36%), Gaps = 18/165 (10%)

Query: 135 KGVNWTSLRPVYIYGP---------LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV 185
           +G+ +T  RP    GP         +  +         L  G PI +   G Q      +
Sbjct: 166 EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI 225

Query: 186 KDLARAFVQVLGNE--KASRQVFNI-SGEKYVTFDGLARACAKAAGFPEPELVHYNP--- 239
           +D   A  +++ N   +   ++ NI + E   + + L      +     P   H+ P   
Sbjct: 226 RDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE-KHPLRHHFPPFAG 284

Query: 240 -KEFDFGKKKAFPFRD-QHFFASVEKAKHVLGWKPEFDLVEGLAD 282
            +  +        ++D +H   S+  A   L W+P+ D+ E + +
Sbjct: 285 FRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDE 329

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 16/137 (11%)

Query: 148 YGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ 204
           +GP   +N   V   F  +   G P+ + GSG Q     +V DL    V ++ +  +S  
Sbjct: 201 FGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSS-- 258

Query: 205 VFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKA 264
             N+   +  T    A+      G    E+   +  + D       P + +     ++KA
Sbjct: 259 PVNLGNPEEHTILEFAQLIKNLVG-SGSEIQFLSEAQDD-------PQKRK---PDIKKA 307

Query: 265 KHVLGWKPEFDLVEGLA 281
           K +LGW+P   L EGL 
Sbjct: 308 KLMLGWEPVVPLEEGLN 324

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 28/149 (18%), Positives = 50/149 (33%), Gaps = 27/149 (18%)

Query: 147 IYGPLNYNPVEE----WFFHR-----LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 197
           +YG   +   ++    WF  +         +P  I G+G QV  + H +D+   +   L 
Sbjct: 195 MYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALA 254

Query: 198 NEKASR-QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAF----PF 252
           N    R   FNI G    +   L             EL        +   +         
Sbjct: 255 NVSKIRGNAFNIGGTIVNSLSLL-------------ELFKLLEDYCNIDMRFTNLPVRES 301

Query: 253 RDQHFFASVEKAKHVLGWKPEFDLVEGLA 281
             + F A ++K  + + W P+    +G+ 
Sbjct: 302 DQRVFVADIKKITNAIDWSPKVSAKDGVQ 330

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 48.8 bits (116), Expect = 9e-07
 Identities = 43/252 (17%), Positives = 73/252 (28%), Gaps = 36/252 (14%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSK---ILHLKGD 57
           G   F+G  L   L     H +    R             ++E      K   I+HL G 
Sbjct: 7   GAKGFVGKNLKADLTSTTDHHIFEVHRQ----------TKEEELESALLKADFIVHLAGV 56

Query: 58  RKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDAL--PNLEQFIYCSSAGVYLKSDLL 115
                        +        N      ++ +LD L     +  I  SS+     +   
Sbjct: 57  N----------RPEHDKEFSLGN---VSYLDHVLDILTRNTKKPAILLSSSIQA--TQDN 101

Query: 116 PHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGP---LNYNPVEEWFFHRLKAGRPIPI 172
           P+ ES+ +G+       E  G      R   ++G     NYN V   F +++     I +
Sbjct: 102 PYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV 161

Query: 173 PGSGIQVTQLGHVKDLARAFVQVL-GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPE 231
                    L +V D+     + + G       V  +     VT   +     K      
Sbjct: 162 -NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRL 220

Query: 232 PELVHYNPKEFD 243
              +      F+
Sbjct: 221 DRTLPKLDNLFE 232

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 46.5 bits (111), Expect = 4e-06
 Identities = 21/102 (20%), Positives = 34/102 (33%), Gaps = 9/102 (8%)

Query: 128 TESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP-GSGIQVTQLGHVK 186
           TE +L   G+ +T LR  +      Y+                    G G          
Sbjct: 121 TEKMLADSGIVYTLLRNGW------YSENYLASAPAALEHGVFIGAAGDG--KIASATRA 172

Query: 187 DLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG 228
           D A A  +V+       +V+ ++G+   T   LA    K +G
Sbjct: 173 DYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSG 214

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score = 44.3 bits (105), Expect = 4e-05
 Identities = 38/185 (20%), Positives = 69/185 (37%), Gaps = 20/185 (10%)

Query: 133 ESKGVNWTSLRPVYIYGP---------LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG 183
           E +G+ +T  RP    GP         +  +         L  G PI +   G Q     
Sbjct: 479 EKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFT 538

Query: 184 HVKDLARAFVQVLGNE--KASRQVFNISG-EKYVTFDGLARACAKAAGFPEPELVHYNPK 240
            ++D   A  +++ N   +   ++ NI   E   + + L      +     P   H+ P 
Sbjct: 539 DIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKH-PLRHHFPPF 597

Query: 241 -EFDFGKKKAF---PFRD-QHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRK 295
             F   +  ++    ++D +H   S+  A   L W+P+ D+ E + ++  LDF   T   
Sbjct: 598 AGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDET--LDFFLRTVDL 655

Query: 296 EADFS 300
               S
Sbjct: 656 TDKPS 660

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 43.4 bits (103), Expect = 5e-05
 Identities = 28/156 (17%), Positives = 52/156 (33%), Gaps = 24/156 (15%)

Query: 133 ESKGVNWTSLRPVYIYGPL---NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 189
           +   +++ ++ P  + GP    +  P        +             Q     H+ DL 
Sbjct: 179 KENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFV---HLDDLC 235

Query: 190 RAFVQVLGNEKAS-RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYN-PKEFDFGKK 247
            A + +  N KA  R  +  S         LA+   +   +PE     YN P EF    +
Sbjct: 236 NAHIYLFENPKAEGR--YICS-SHDCIILDLAKMLREK--YPE-----YNIPTEFKGVDE 285

Query: 248 KAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADS 283
                       S +K    LG++ ++ L +    +
Sbjct: 286 NLKSVCF-----SSKKLT-DLGFEFKYSLEDMFTGA 315

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 43.0 bits (102), Expect = 6e-05
 Identities = 28/157 (17%), Positives = 56/157 (35%), Gaps = 26/157 (16%)

Query: 133 ESKGVNWTSLRPVYIYGPL---NYNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDL 188
           E  G++  +L   +I G           E     +   +  I +    + V    HV D+
Sbjct: 176 EQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHM-V----HVDDV 230

Query: 189 ARAFVQVLGNEKAS-RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYN-PKEFDFGK 246
           ARA + +L N     R  +N S    V  + +++  +    +PE     Y      +  +
Sbjct: 231 ARAHIYLLENSVPGGR--YNCSPF-IVPIEEMSQLLSAK--YPE-----YQILTVDELKE 280

Query: 247 KKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADS 283
            K     D     + +K     G+  ++ + +   D+
Sbjct: 281 IKGARLPD----LNTKKLV-DAGFDFKYTIEDMFDDA 312

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* Length = 321

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 47/185 (25%), Positives = 70/185 (37%), Gaps = 47/185 (25%)

Query: 136 GVNWTSLRPVYIYGPL-NYNPVEEWF-------FHRLKAGR--PIPIPGSGIQVTQLGHV 185
           G ++ S+ P  +YGP  N++P            FH   A +   + + GSG  + +  HV
Sbjct: 155 GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHV 214

Query: 186 KDLARAFVQVLGNEKASRQVF--------NI-SGEKYVTFDGLARACAKAAGFPEPELVH 236
            D+A A + V+                  N+ +G    T   LA+  AK  G+ +  +V 
Sbjct: 215 DDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVD-CTIRELAQTIAKVVGY-KGRVV- 271

Query: 237 YNPKEFDFGK-----KKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSY-----NL 286
                FD  K     +K            V +    LGW  E  L  GLA +Y     N 
Sbjct: 272 -----FDASKPDGTPRK---------LLDVTRLHQ-LGWYHEISLEAGLASTYQWFLENQ 316

Query: 287 DFGRG 291
           D  RG
Sbjct: 317 DRFRG 321

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 40.3 bits (95), Expect = 5e-04
 Identities = 31/161 (19%), Positives = 56/161 (34%), Gaps = 28/161 (17%)

Query: 133 ESKGVNWTSLRPVYIYGPL---NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG----HV 185
           E   ++  ++ P  + G     +           +     +     G+Q+        HV
Sbjct: 184 EENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHV 243

Query: 186 KDLARAFVQVLGNEKAS-RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYN-PKEF- 242
           +D+ RA + V   E AS R  +        +   LA+  +K   +P+     Y  P +F 
Sbjct: 244 EDVCRAHIFVAEKESASGR--YICC-AANTSVPELAKFLSKR--YPQ-----YKVPTDFG 293

Query: 243 DFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADS 283
           DF  K            S EK     G+  ++ + E   +S
Sbjct: 294 DFPPKSKLII-------SSEKLVK-EGFSFKYGIEEIYDES 326

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	314
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.98
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.98
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.97
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.97
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.97
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.97
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.96
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.96
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.96
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.96
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.95
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.95
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.95
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.95
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.95
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.95
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.94
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.94
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.94
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.94
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.94
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.94
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.94
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.93
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.93
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.92
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.91
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.91
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.91
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.89
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.84
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.84
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.82
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.82
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.81
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.8
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.8
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.8
1spx_A	278	Short-chain reductase family member (5L265); paral	99.79
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.78
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.78
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.78
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.78
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.78
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.78
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.78
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.77
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.77
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.76
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.76
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.76
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.76
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.76
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.76
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.75
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.75
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.75
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.75
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.75
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.75
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.75
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.75
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.75
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.75
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.74
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.74
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.74
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.74
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.74
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.74
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.74
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.74
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.74
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.74
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.74
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.74
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.74
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.74
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.74
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.74
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.74
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.74
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.73
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.73
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.73
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.73
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.73
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.73
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.73
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.73
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.73
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.73
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.73
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.73
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.72
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.72
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.72
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.72
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.72
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.72
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.72
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.72
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.71
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.71
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.71
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.71
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.71
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.71
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.71
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.71
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.71
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.71
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.71
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.71
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.71
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.71
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.71
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.7
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.7
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.7
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.7
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.7
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.7
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.7
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.7
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.7
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.7
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.7
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.7
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.7
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.7
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.69
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.69
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.69
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.69
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.69
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.69
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.69
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.69
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.69
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.69
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.69
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.69
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.69
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.69
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.69
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.69
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.68
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.68
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.68
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.68
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.68
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.68
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.68
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.68
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.68
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.68
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.68
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.68
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.68
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.68
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.67
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.67
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.67
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.67
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.67
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.67
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.66
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.66
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.66
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.66
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.66
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.66
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.66
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.65
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.65
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.65
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.65
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.65
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.65
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.65
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.64
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.64
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.64
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.64
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.64
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.64
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.63
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.63
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.63
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.63
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.63
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.63
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.63
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.62
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.62
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.62
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.62
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.62
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.62
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.62
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.62
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.61
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.61
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.61
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.6
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.6
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.6
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.59
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.59
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.59
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.59
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.58
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.58
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.57
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.57
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.57
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.57
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.57
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.57
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.56
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.55
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.55
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.55
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.55
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.55
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.54
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.53
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.53
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.52
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.49
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.46
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.46
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.45
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.45
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.4
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.4
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.35
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.32
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.29
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.26
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.22
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.12
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.11
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.09
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.06
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.87
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.84
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	98.81
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.8
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.78
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.74
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	98.68
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	98.66
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	98.61
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.39
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.3
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.13
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.12
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	97.95
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.85
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.83
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	97.81
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	97.75
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.72
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.71
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.68
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.62
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	97.59
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.57
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.54
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.54
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.41
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.39
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.36
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	97.35
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	97.35
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.28
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.16
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.14
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.1
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.08
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	96.91
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	96.9
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	96.8
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	96.75
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	96.71
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	96.63
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	96.6
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	96.57
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.47
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	96.47
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.46
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	96.44
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	96.42
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.42
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.4
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.33
4eye_A	342	Probable oxidoreductase; structural genomics, niai	96.28
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	96.26
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	96.19
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	96.18
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	96.16
3gms_A	340	Putative NADPH:quinone reductase; structural genom	96.05
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	95.95
1lnq_A	336	MTHK channels, potassium channel related protein;	95.89
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	95.72
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	95.71
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	95.7
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	95.68
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	95.68
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.59
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	95.58
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	95.54
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	95.45
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.43
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	95.38
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	95.11
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	95.07
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	95.0
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	94.98
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	94.97
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	94.89
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	94.77
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	94.74
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	94.7
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	94.69
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	94.62
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	94.57
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	94.53
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	94.53
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	94.49
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	94.49
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	94.43
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	94.36
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	94.33
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	94.33
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	94.28
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	94.28
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	94.26
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	94.26
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	94.22
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	94.19
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	94.18
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	94.18
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	94.17
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	94.07
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	94.04
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	94.01
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	94.01
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	93.98
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	93.79
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	93.78
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	93.77
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	93.76
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	93.75
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	93.72
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	93.63
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	93.62
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	93.58
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	93.57
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	93.54
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	93.51
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	93.49
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	93.48
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	93.47
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	93.42
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	93.41
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	93.38
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	93.36
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	93.36
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	93.34
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	93.3
2duw_A	145	Putative COA-binding protein; ligand binding prote	93.29
3qha_A	296	Putative oxidoreductase; seattle structural genomi	93.26
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	93.25
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	93.21
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	93.21
1dxy_A	333	D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc	93.2
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	93.2
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	93.16
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	93.09
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	93.06
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	93.05
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	92.99
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	92.97
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	92.97
3ojo_A	431	CAP5O; rossmann fold, complex with cofactor NAD an	92.91
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	92.89
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	92.88
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	92.86
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	92.85
1xdw_A	331	NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas	92.84
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	92.74
3oet_A	381	Erythronate-4-phosphate dehydrogenase; structural	92.71
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	92.67
1iuk_A	140	Hypothetical protein TT1466; structural genomics,	92.66
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	92.58
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	92.58
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	92.57
4ezb_A	317	Uncharacterized conserved protein; structural geno	92.51
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	92.49
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	92.47
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	92.44
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	92.37
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	92.37
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	92.35
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	92.32
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	92.26
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	92.24
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	92.14
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	92.06
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	92.05
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	92.02
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	92.02
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	91.95
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	91.94
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	91.9
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	91.9
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	91.89
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	91.87
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	91.85
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	91.85
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	91.8
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	91.8
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	91.79
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	91.74
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	91.72
2o4c_A	380	Erythronate-4-phosphate dehydrogenase; erythronate	91.64
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	91.59
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	91.57
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	91.52
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	91.47
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	91.47
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	91.47
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	91.42
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	91.32
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	91.3
1sc6_A	404	PGDH, D-3-phosphoglycerate dehydrogenase; alloster	91.22
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	91.19
3k5p_A	416	D-3-phosphoglycerate dehydrogenase; niaid, ssgcid,	91.18

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=3.1e-41  Score=291.28  Aligned_cols=264  Identities=21%  Similarity=0.290  Sum_probs=221.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||+|++|++.|+++|++|++++|++.. .. +            .+++++.+|++ ++++.++++  ++|+|||+|
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~-~------------~~~~~~~~Dl~-~~~~~~~~~--~~d~Vih~a   70 (311)
T 3m2p_A            8 TGGTGFLGQYVVESIKNDGNTPIILTRSIGN-KA-I------------NDYEYRVSDYT-LEDLINQLN--DVDAVVHLA   70 (311)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------------CCEEEECCCC-HHHHHHHTT--TCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc-cc-C------------CceEEEEcccc-HHHHHHhhc--CCCEEEEcc
Confidence            7999999999999999999999999999333 21 2            37899999999 999999998  999999999


Q ss_pred             CCC------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHHh----
Q 021331           81 GRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLES----  134 (314)
Q Consensus        81 ~~~------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~~----  134 (314)
                      +..            ..++.+++++|.  ++++|||+||.++|+.....|+.|        .|+.+|..+|+++++    
T Consensus        71 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~  150 (311)
T 3m2p_A           71 ATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRK  150 (311)
T ss_dssp             CCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence            863            345788999987  788999999999998655444443        689999999999865    


Q ss_pred             cCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCcc
Q 021331          135 KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  213 (314)
Q Consensus       135 ~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~  213 (314)
                      ++++++++||+.+|||+... .++..++..+..+.++.++++++..++++|++|+|++++.+++++. .+++||++++++
T Consensus       151 ~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~~i~~~~~  229 (311)
T 3m2p_A          151 KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK-VSGTFNIGSGDA  229 (311)
T ss_dssp             SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT-CCEEEEECCSCE
T ss_pred             cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC-CCCeEEeCCCCc
Confidence            78999999999999997543 5778888888889998888889999999999999999999999876 688999999999


Q ss_pred             ccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHhhhhcCCC
Q 021331          214 VTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGT  292 (314)
Q Consensus       214 ~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~~~~~~~  292 (314)
                      +|+.|+++.+.+.+|.+. .+...+..         .+.......+|++|++++|||.|+++++++|+++++|+++.+.
T Consensus       230 ~s~~e~~~~i~~~~g~~~-~~~~~~~~---------~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~  298 (311)
T 3m2p_A          230 LTNYEVANTINNAFGNKD-NLLVKNPN---------ANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGLDD  298 (311)
T ss_dssp             ECHHHHHHHHHHHTTCTT-CEEECSSS---------BCCSCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC---
T ss_pred             ccHHHHHHHHHHHhCCCC-cceecCCC---------CCCCcCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHhccc
Confidence            999999999999999876 44444331         1233466778999999999999999999999999999988653

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=6e-41  Score=294.27  Aligned_cols=277  Identities=19%  Similarity=0.206  Sum_probs=222.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc-----cCceEEEEecCCChhhHHHhhhcCCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-----SSKILHLKGDRKDYDFVKSSLSAKGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~d~~~l~~~~~~~~~d~   75 (314)
                      ||||||||++|++.|+++|++|++++|+.......+.     .+...     ..+++++.+|++|++++.++++  ++|+
T Consensus        31 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~  103 (351)
T 3ruf_A           31 TGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLD-----EVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--GVDH  103 (351)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHH-----HHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--TCSE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhh-----hhhhccccccCCceEEEEccCCCHHHHHHHhc--CCCE
Confidence            7999999999999999999999999998654221110     00000     1579999999999999999998  9999


Q ss_pred             EEEcCCCC----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHH
Q 021331           76 VYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e  129 (314)
                      |||+|+..                ..++.+++++|.  ++++|||+||.++|+.....|+.|        .|+.+|..+|
T Consensus       104 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E  183 (351)
T 3ruf_A          104 VLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNE  183 (351)
T ss_dssp             EEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHH
T ss_pred             EEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHHH
Confidence            99999862                445778999987  788999999999998766555544        6899999999


Q ss_pred             HHHH----hcCCceEEEecCeeeCCCCCC-----chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC-C
Q 021331          130 SVLE----SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN-E  199 (314)
Q Consensus       130 ~~~~----~~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~-~  199 (314)
                      ++++    +++++++++||+.||||+...     .++..++..+..+.++.+++++++.++++|++|+|++++.++.+ +
T Consensus       184 ~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~  263 (351)
T 3ruf_A          184 IYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKD  263 (351)
T ss_dssp             HHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCG
T ss_pred             HHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhcc
Confidence            9875    458999999999999997532     46778888888888888888999999999999999999999987 4


Q ss_pred             ccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHH
Q 021331          200 KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEG  279 (314)
Q Consensus       200 ~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~  279 (314)
                      ...+++||+++++++|+.|+++.+.+.+|.+. .+...+.....     ..+.......+|++|++++|||.|+++++++
T Consensus       264 ~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~-----~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~  337 (351)
T 3ruf_A          264 SAKDNIYNVAVGDRTTLNELSGYIYDELNLIH-HIDKLSIKYRE-----FRSGDVRHSQADVTKAIDLLKYRPNIKIREG  337 (351)
T ss_dssp             GGCSEEEEESCSCCEEHHHHHHHHHHHHHTTC-CC-----EEEC-----CCTTCCSBCCBCCHHHHHHHCCCCCCCHHHH
T ss_pred             ccCCCEEEeCCCCcccHHHHHHHHHHHhCccc-ccccccccccC-----CCCCccceeeeCHHHHHHHhCCCCCCCHHHH
Confidence            45789999999999999999999999999743 22222211110     1122335677899999999999999999999


Q ss_pred             HHHHHhhhhcC
Q 021331          280 LADSYNLDFGR  290 (314)
Q Consensus       280 l~~~~~~~~~~  290 (314)
                      |+++++|++++
T Consensus       338 l~~~~~~~~~~  348 (351)
T 3ruf_A          338 LRLSMPWYVRF  348 (351)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99999998763

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=3.5e-41  Score=291.00  Aligned_cols=272  Identities=21%  Similarity=0.249  Sum_probs=217.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|++.|+++|++|++++|+........           ..++.++.+|+.|++ +.++++  + |+|||+|
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dl~d~~-~~~~~~--~-d~vih~A   70 (312)
T 3ko8_A            6 TGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-----------NPSAELHVRDLKDYS-WGAGIK--G-DVVFHFA   70 (312)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-----------CTTSEEECCCTTSTT-TTTTCC--C-SEEEECC
T ss_pred             ECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-----------CCCceEEECccccHH-HHhhcC--C-CEEEECC
Confidence            799999999999999999999999999876533222           267899999999998 888887  5 9999999


Q ss_pred             CC----------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHHh
Q 021331           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLES  134 (314)
Q Consensus        81 ~~----------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~~  134 (314)
                      +.                |..++.++++++.  ++++|||+||.++|+.....|..|        .|+.+|..+|.+++.
T Consensus        71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~  150 (312)
T 3ko8_A           71 ANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCAT  150 (312)
T ss_dssp             SSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence            85                2345778898887  788999999999998765444433        699999999998754


Q ss_pred             ----cCCceEEEecCeeeCCCCCCchhHHHHHHHHcC-CCeecCCCCCceeeeeeHHHHHHHHHHHhcC---CccCCceE
Q 021331          135 ----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGN---EKASRQVF  206 (314)
Q Consensus       135 ----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~---~~~~~~~~  206 (314)
                          ++++++++||+.+|||+....++..++..+..+ ..+.+++++++.++++|++|+|++++.++++   +...+++|
T Consensus       151 ~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~  230 (312)
T 3ko8_A          151 YARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLAL  230 (312)
T ss_dssp             HHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred             HHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEE
Confidence                589999999999999987666677777777766 4566778889999999999999999999987   44467899


Q ss_pred             EecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHhh
Q 021331          207 NISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNL  286 (314)
Q Consensus       207 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~  286 (314)
                      |+++++.+|+.|+++.+.+.+|.+. .+...+.....    ..++.......+|++|+++.|||.|+++++++|+++++|
T Consensus       231 ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~----~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~  305 (312)
T 3ko8_A          231 NVGNVDAVRVLDIAQIVAEVLGLRP-EIRLVPSTPDG----RGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAED  305 (312)
T ss_dssp             EESCSSCEEHHHHHHHHHHHHTCCC-EEEEC--------------CCCSEECBCCHHHHHHHCCCCSSCHHHHHHHHHHH
T ss_pred             EEcCCCceeHHHHHHHHHHHhCCCC-ceeecCccccc----cCCCCCccccccCHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999875 55554432211    112233456788999999999999999999999999999


Q ss_pred             hhcCCC
Q 021331          287 DFGRGT  292 (314)
Q Consensus       287 ~~~~~~  292 (314)
                      +++++|
T Consensus       306 ~~~~~~  311 (312)
T 3ko8_A          306 LAKELW  311 (312)
T ss_dssp             HHHHHC
T ss_pred             HHhhhc
Confidence            987763

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=2.8e-40  Score=289.46  Aligned_cols=274  Identities=16%  Similarity=0.245  Sum_probs=222.2

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCccc-ccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      ||||||||++|++.|+++|  ++|++++|..... ...+....      ...++.++.+|++|++.+.++++..++|+||
T Consensus        30 tGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi  103 (346)
T 4egb_A           30 TGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQ------DHPNYYFVKGEIQNGELLEHVIKERDVQVIV  103 (346)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTT------TCTTEEEEECCTTCHHHHHHHHHHHTCCEEE
T ss_pred             ECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhc------cCCCeEEEEcCCCCHHHHHHHHhhcCCCEEE
Confidence            7999999999999999999  7888888765321 11111100      0258999999999999999999844599999


Q ss_pred             EcCCCC----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCC-CCCccC--------ccccchhhHHH
Q 021331           78 DINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD-LLPHCE--------SRHKGKLNTES  130 (314)
Q Consensus        78 ~~a~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~-~~~~~e--------~~~~~k~~~e~  130 (314)
                      |+|+..                ..++.+++++|.  ++++|||+||.++|+... ..++.|        .|+.+|..+|+
T Consensus       104 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  183 (346)
T 4egb_A          104 NFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADM  183 (346)
T ss_dssp             ECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHHHH
Confidence            999863                334788999987  788999999999998652 223333        69999999999


Q ss_pred             HHHh----cCCceEEEecCeeeCCCCC-CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCce
Q 021331          131 VLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV  205 (314)
Q Consensus       131 ~~~~----~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~  205 (314)
                      +++.    ++++++++||+.||||+.. ..++..++..+..+.++.++++++..++++|++|+|++++.++.++. .+++
T Consensus       184 ~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~g~~  262 (346)
T 4egb_A          184 IALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR-VGEV  262 (346)
T ss_dssp             HHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC-TTCE
T ss_pred             HHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC-CCCE
Confidence            8864    6899999999999999754 35677888888888888888889999999999999999999998866 6889


Q ss_pred             EEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHh
Q 021331          206 FNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYN  285 (314)
Q Consensus       206 ~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~  285 (314)
                      ||+++++++|+.|+++.+.+.+|.+.+.+...+.          .+.....+.+|++|++++|||.|+++++++|+++++
T Consensus       263 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----------~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~  332 (346)
T 4egb_A          263 YNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTD----------RLGHDRRYAINAEKMKNEFDWEPKYTFEQGLQETVQ  332 (346)
T ss_dssp             EEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC------------CCCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHH
T ss_pred             EEECCCCceeHHHHHHHHHHHhCCCcccccccCC----------CCCCcceeeccHHHHHHHcCCCCCCCHHHHHHHHHH
Confidence            9999999999999999999999987633332221          122235567899999999999999999999999999


Q ss_pred             hhhcCC
Q 021331          286 LDFGRG  291 (314)
Q Consensus       286 ~~~~~~  291 (314)
                      |+.++.
T Consensus       333 ~~~~~~  338 (346)
T 4egb_A          333 WYEKNE  338 (346)
T ss_dssp             HHHHCH
T ss_pred             HHHhhh
Confidence            998754

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=8.4e-41  Score=295.60  Aligned_cols=276  Identities=19%  Similarity=0.258  Sum_probs=221.0

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCC-ChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-d~~~l~~~~~~~~~d~vi~   78 (314)
                      ||||||||++|++.|+++ |++|++++|+.+.......          ..+++++.+|++ |++.+.++++  ++|+|||
T Consensus        30 tGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----------~~~v~~~~~Dl~~d~~~~~~~~~--~~d~Vih   97 (372)
T 3slg_A           30 LGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK----------HERMHFFEGDITINKEWVEYHVK--KCDVILP   97 (372)
T ss_dssp             ESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG----------STTEEEEECCTTTCHHHHHHHHH--HCSEEEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc----------CCCeEEEeCccCCCHHHHHHHhc--cCCEEEE
Confidence            799999999999999998 9999999998765332221          268999999999 9999999998  9999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC---------------ccccch
Q 021331           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE---------------SRHKGK  125 (314)
Q Consensus        79 ~a~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e---------------~~~~~k  125 (314)
                      +|+..                +.++.+++++|.  + ++|||+||.++|+.....++.|               .|+.+|
T Consensus        98 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK  176 (372)
T 3slg_A           98 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSK  176 (372)
T ss_dssp             CBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHH
T ss_pred             cCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHH
Confidence            99863                345688999987  6 8999999999998755444332               499999


Q ss_pred             hhHHHHHHhc---CCceEEEecCeeeCCCCC---------CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHH
Q 021331          126 LNTESVLESK---GVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  193 (314)
Q Consensus       126 ~~~e~~~~~~---~~~~~ilR~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  193 (314)
                      ..+|++++.+   +++++++||+.||||+..         ..++..++..+..+.++.+++++++.++++|++|+|++++
T Consensus       177 ~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  256 (372)
T 3slg_A          177 QLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALM  256 (372)
T ss_dssp             HHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHH
Confidence            9999999766   899999999999999743         2367778888889998888888899999999999999999


Q ss_pred             HHhcCCc--cCCceEEecCC-ccccHHHHHHHHHHHhCCCCCeeeecCCc--ccccCCC---CcccCCCcceeecHHhHH
Q 021331          194 QVLGNEK--ASRQVFNISGE-KYVTFDGLARACAKAAGFPEPELVHYNPK--EFDFGKK---KAFPFRDQHFFASVEKAK  265 (314)
Q Consensus       194 ~~l~~~~--~~~~~~~i~~~-~~~s~~el~~~i~~~~g~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~k~~  265 (314)
                      .++.++.  ..+++||++++ +.+|+.|+++.+.+.+|.+. .+...+..  .......   ............|++|++
T Consensus       257 ~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  335 (372)
T 3slg_A          257 KIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFP-EYADSAKRVKLVETTSGAYYGNGYQDVQNRVPKIENTM  335 (372)
T ss_dssp             HHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCT-TTHHHHHTCCEEEC-------------CCCCBCCHHHH
T ss_pred             HHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCc-ccccccccceeeeccccccccCCccccceeecCHHHHH
Confidence            9999865  46899999994 79999999999999999764 22221110  0000000   000123346678999999


Q ss_pred             hhcCCCcccChHHHHHHHHhhhhcC
Q 021331          266 HVLGWKPEFDLVEGLADSYNLDFGR  290 (314)
Q Consensus       266 ~~lg~~~~~~~~~~l~~~~~~~~~~  290 (314)
                      ++|||.|+++++++|+++++|++++
T Consensus       336 ~~lG~~p~~~l~e~l~~~~~~~~~~  360 (372)
T 3slg_A          336 QELGWAPQFTFDDALRQIFEAYRGH  360 (372)
T ss_dssp             HHHTCCCCCCHHHHHHHHHHHHTTC
T ss_pred             HHcCCCCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999999999998764

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=1.4e-40  Score=291.48  Aligned_cols=258  Identities=20%  Similarity=0.283  Sum_probs=218.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|++.|+++|++|++++|+...                 .++.++.+|+.|++++.++++  ++|+|||+|
T Consensus        25 tGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------------~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A   85 (347)
T 4id9_A           25 TGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------------TGGEEVVGSLEDGQALSDAIM--GVSAVLHLG   85 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------------SCCSEEESCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------------CCccEEecCcCCHHHHHHHHh--CCCEEEECC
Confidence            7999999999999999999999999998755                 467889999999999999998  999999999


Q ss_pred             CCC--------------cccHHHHHHhCC--CCCcEEEEeeceeecc--CCCCCccC--------ccccchhhHHHHHH-
Q 021331           81 GRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLK--SDLLPHCE--------SRHKGKLNTESVLE-  133 (314)
Q Consensus        81 ~~~--------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~--~~~~~~~e--------~~~~~k~~~e~~~~-  133 (314)
                      +..              ..++.+++++|.  ++++|||+||.++|+.  ....|+.|        .|+.+|..+|++++ 
T Consensus        86 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~  165 (347)
T 4id9_A           86 AFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRF  165 (347)
T ss_dssp             CCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHH
Confidence            863              345788999987  7889999999999987  33333333        68999999999885 


Q ss_pred             ---hcCCceEEEecCeee-------------CCCCC------------CchhHHHHHHHHcCCCeecCCCCCceeee---
Q 021331          134 ---SKGVNWTSLRPVYIY-------------GPLNY------------NPVEEWFFHRLKAGRPIPIPGSGIQVTQL---  182 (314)
Q Consensus       134 ---~~~~~~~ilR~~~v~-------------g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  182 (314)
                         +++++++++||+.+|             ||+..            ..++..++..+..+.++.++++++..+++   
T Consensus       166 ~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  245 (347)
T 4id9_A          166 HQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMH  245 (347)
T ss_dssp             HHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEEC
T ss_pred             HHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccC
Confidence               468999999999999             77522            34566777777788887777888888899   


Q ss_pred             -eeHHHHHHHHHHHhcCCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecH
Q 021331          183 -GHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASV  261 (314)
Q Consensus       183 -i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (314)
                       +|++|+|++++.++.++...+++||+++++++|+.|+++.+.+.+|.+. .+...+...             ....+|+
T Consensus       246 ~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~p~~~-------------~~~~~d~  311 (347)
T 4id9_A          246 ITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPI-VTVDFPGDG-------------VYYHTSN  311 (347)
T ss_dssp             EEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCE-EEEECSSCC-------------CBCCBCC
T ss_pred             cEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCC-ceeeCCCcc-------------cccccCH
Confidence             9999999999999998755689999999999999999999999999865 444433322             2567899


Q ss_pred             HhHHhhcCCCcccChHHHHHHHHhhhhcCC
Q 021331          262 EKAKHVLGWKPEFDLVEGLADSYNLDFGRG  291 (314)
Q Consensus       262 ~k~~~~lg~~~~~~~~~~l~~~~~~~~~~~  291 (314)
                      +|++++|||.|+++++++|+++++|+.++.
T Consensus       312 ~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~  341 (347)
T 4id9_A          312 ERIRNTLGFEAEWTMDRMLEEAATARRQRL  341 (347)
T ss_dssp             HHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHhhh
Confidence            999999999999999999999999988754

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-39  Score=283.93  Aligned_cols=275  Identities=20%  Similarity=0.228  Sum_probs=216.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh-ccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      ||||||||+++++.|+++|++|++++|+........     ..+.. ...++.++.+|++|++++.++++..++|+|||+
T Consensus        11 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   85 (341)
T 3enk_A           11 TGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAI-----ARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHF   85 (341)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHH-----HHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             ecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHH-----HHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEEC
Confidence            799999999999999999999999999876532111     01111 125789999999999999999987789999999


Q ss_pred             CCCC----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHH
Q 021331           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLE  133 (314)
Q Consensus        80 a~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~  133 (314)
                      |+..                ..++.+++++|.  ++++||++||..+|+.....+..|        .|+.+|..+|++++
T Consensus        86 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~  165 (341)
T 3enk_A           86 AALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILR  165 (341)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHH
T ss_pred             ccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence            9863                335678888887  678999999999998765544443        68999999999886


Q ss_pred             h----c-CCceEEEecCeeeCCCC-----------CCchhHHHHHHHHcC-CCeecCC------CCCceeeeeeHHHHHH
Q 021331          134 S----K-GVNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLKAG-RPIPIPG------SGIQVTQLGHVKDLAR  190 (314)
Q Consensus       134 ~----~-~~~~~ilR~~~v~g~~~-----------~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~i~~~D~a~  190 (314)
                      .    . +++++++||+.+|||+.           ...+++.+....... ..+.++|      ++++.++++|++|+|+
T Consensus       166 ~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~  245 (341)
T 3enk_A          166 DVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLAR  245 (341)
T ss_dssp             HHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHH
T ss_pred             HHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHH
Confidence            4    3 49999999999999953           133444444433332 4556666      7888999999999999


Q ss_pred             HHHHHhcC--CccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhc
Q 021331          191 AFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVL  268 (314)
Q Consensus       191 ~~~~~l~~--~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l  268 (314)
                      +++.++.+  +...+++||+++++++|+.|+++.+.+.+|.+. .+...+.          .+........|++|++++|
T Consensus       246 a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~----------~~~~~~~~~~d~~k~~~~l  314 (341)
T 3enk_A          246 GHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAV-PYELVAR----------RPGDVAECYANPAAAAETI  314 (341)
T ss_dssp             HHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCC-CEEEECC----------CTTCCSEECBCCHHHHHHH
T ss_pred             HHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCc-ceeeCCC----------CCCCccccccCHHHHHHHc
Confidence            99999986  234688999999999999999999999999876 4433332          1223356778999999999


Q ss_pred             CCCcccChHHHHHHHHhhhhcCC
Q 021331          269 GWKPEFDLVEGLADSYNLDFGRG  291 (314)
Q Consensus       269 g~~~~~~~~~~l~~~~~~~~~~~  291 (314)
                      ||.|+++++++|+++++|++++.
T Consensus       315 G~~p~~~l~~~l~~~~~~~~~~~  337 (341)
T 3enk_A          315 GWKAERDLERMCADHWRWQENNP  337 (341)
T ss_dssp             CCCCCCCHHHHHHHHHHHHHHST
T ss_pred             CCCCCCCHHHHHHHHHHHHHhcC
Confidence            99999999999999999998764

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=1e-39  Score=281.97  Aligned_cols=266  Identities=20%  Similarity=0.276  Sum_probs=210.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|++.|+++| .++++++.........           ..++.++.+|++| +++.++++  ++|+|||+|
T Consensus         7 TGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~-----------~~~~~~~~~Dl~~-~~~~~~~~--~~d~vih~a   71 (313)
T 3ehe_A            7 TGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV-----------NEAARLVKADLAA-DDIKDYLK--GAEEVWHIA   71 (313)
T ss_dssp             ETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS-----------CTTEEEECCCTTT-SCCHHHHT--TCSEEEECC
T ss_pred             ECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc-----------CCCcEEEECcCCh-HHHHHHhc--CCCEEEECC
Confidence            7999999999999999999 5555555443322222           2678999999999 88999998  999999999


Q ss_pred             CC----------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHH-
Q 021331           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLE-  133 (314)
Q Consensus        81 ~~----------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~-  133 (314)
                      +.                |..++.+++++|.  ++++|||+||.++|+.....|..|        .|+.+|..+|.+++ 
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  151 (313)
T 3ehe_A           72 ANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIES  151 (313)
T ss_dssp             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            85                2345778888887  788999999999998765444443        59999999999875 


Q ss_pred             ---hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcC-CCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEec
Q 021331          134 ---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS  209 (314)
Q Consensus       134 ---~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~  209 (314)
                         +++++++++||+.||||+....++..++..+..+ .++.+++++++.++++|++|+|++++.++... ..+++||++
T Consensus       152 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~ni~  230 (313)
T 3ehe_A          152 YCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGD-ERVNIFNIG  230 (313)
T ss_dssp             HHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCC-SSEEEEECC
T ss_pred             HHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccC-CCCceEEEC
Confidence               4689999999999999987666777777777666 55667889999999999999999999999843 357899999


Q ss_pred             CCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHhhhhc
Q 021331          210 GEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFG  289 (314)
Q Consensus       210 ~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~~~~  289 (314)
                      +++++|+.|+++.+.+.+|.+. .+...+...       .++.......+|++|++ .|||.|+++++++|+++++|+++
T Consensus       231 ~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~-------~~~~~~~~~~~d~~k~~-~lG~~p~~~~~e~l~~~~~~~~~  301 (313)
T 3ehe_A          231 SEDQIKVKRIAEIVCEELGLSP-RFRFTGGDR-------GWKGDVPVMLLSIEKLK-RLGWKPRYNSEEAVRMAVRDLVE  301 (313)
T ss_dssp             CSCCEEHHHHHHHHHHHTTCCC-EEEEC-------------------CCBCCHHHH-HHTCCCSCCHHHHHHHHHHHHHH
T ss_pred             CCCCeeHHHHHHHHHHHhCCCC-ceEECCCcc-------CCccccceeccCHHHHH-HcCCCCCCCHHHHHHHHHHHHHh
Confidence            9999999999999999999865 444332111       11222345678999995 59999999999999999999988


Q ss_pred             CC
Q 021331          290 RG  291 (314)
Q Consensus       290 ~~  291 (314)
                      +.
T Consensus       302 ~~  303 (313)
T 3ehe_A          302 DL  303 (313)
T ss_dssp             HH
T ss_pred             Cc
Confidence            54

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=1.1e-38  Score=276.39  Aligned_cols=264  Identities=18%  Similarity=0.182  Sum_probs=212.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|++.|+++|++|++++|+... ..              .++.++.+|++|++++.++++..++|+|||+|
T Consensus        18 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~--------------l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   82 (321)
T 2pk3_A           18 TGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL--------------PNVEMISLDIMDSQRVKKVISDIKPDYIFHLA   82 (321)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC--------------TTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc--------------ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcC
Confidence            7999999999999999999999999998654 11              15788999999999999999844599999999


Q ss_pred             CCCc----------------ccHHHHHHhCC---CCCcEEEEeeceeeccC--CCCCccC--------ccccchhhHHHH
Q 021331           81 GREA----------------DEVEPILDALP---NLEQFIYCSSAGVYLKS--DLLPHCE--------SRHKGKLNTESV  131 (314)
Q Consensus        81 ~~~~----------------~~~~~~~~~~~---~~~~~i~~Ss~~v~~~~--~~~~~~e--------~~~~~k~~~e~~  131 (314)
                      +...                .++.+++++|.   ++++||++||..+|+..  ...++.|        .|+.+|..+|.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~  162 (321)
T 2pk3_A           83 AKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGML  162 (321)
T ss_dssp             SCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHH
T ss_pred             cccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHH
Confidence            8632                34678888876   47899999999999864  2222222        699999999998


Q ss_pred             HHhc----CCceEEEecCeeeCCCCCC-chhHHHHHHHHc---C--CCeecCCCCCceeeeeeHHHHHHHHHHHhcCCcc
Q 021331          132 LESK----GVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKA---G--RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  201 (314)
Q Consensus       132 ~~~~----~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~  201 (314)
                      ++..    +++++++||+.+|||+... .++..++..+..   +  .++.++++++..++++|++|+|++++.++.++. 
T Consensus       163 ~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~-  241 (321)
T 2pk3_A          163 ARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGK-  241 (321)
T ss_dssp             HHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHCC-
T ss_pred             HHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCCC-
Confidence            8653    8999999999999997643 355566666655   6  466666788889999999999999999998763 


Q ss_pred             CCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHH
Q 021331          202 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLA  281 (314)
Q Consensus       202 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~  281 (314)
                      .+++||+++++.+|+.|+++.+.+.+|.+. .+...|.. .       .+.......+|++|++++|||.|+++++++|+
T Consensus       242 ~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~-~~~~~p~~-~-------~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~  312 (321)
T 2pk3_A          242 TGDVYNVCSGIGTRIQDVLDLLLAMANVKI-DTELNPLQ-L-------RPSEVPTLIGSNKRLKDSTGWKPRIPLEKSLF  312 (321)
T ss_dssp             TTCEEEESCSCEEEHHHHHHHHHHHSSSCC-EEEECGGG-C-------CSSCCSBCCBCCHHHHHHHCCCCCSCHHHHHH
T ss_pred             CCCeEEeCCCCCeeHHHHHHHHHHHhCCCC-ceeecccc-C-------CCcccchhccCHHHHHHHcCCCcCCCHHHHHH
Confidence            578999999999999999999999999865 44433311 0       12223567789999999999999999999999


Q ss_pred             HHHhhhhc
Q 021331          282 DSYNLDFG  289 (314)
Q Consensus       282 ~~~~~~~~  289 (314)
                      ++++|+++
T Consensus       313 ~~~~~~~~  320 (321)
T 2pk3_A          313 EILQSYRQ  320 (321)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHhc
Confidence            99999864

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=8.4e-39  Score=281.76  Aligned_cols=273  Identities=18%  Similarity=0.212  Sum_probs=216.8

Q ss_pred             CCcccccHHHHHHHHHH--CCCeEEEEEcCCccccc--CCCCCCchhhhhccCceEEEEecCCChhhHHHh-hhcCCccE
Q 021331            1 MGGTRFIGVFLSRLLVK--EGHQVTLFTRGKAPIAQ--QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~--~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~-~~~~~~d~   75 (314)
                      ||||||||++|++.|++  .|++|++++|+......  ...............++.++.+|++|++++.++ ..  ++|+
T Consensus        16 TGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~D~   93 (362)
T 3sxp_A           16 TGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKL--HFDY   93 (362)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTS--CCSE
T ss_pred             ECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhcc--CCCE
Confidence            79999999999999999  89999999997652100  000000000011135679999999999999998 55  8999


Q ss_pred             EEEcCCCC--------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHH
Q 021331           76 VYDINGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESV  131 (314)
Q Consensus        76 vi~~a~~~--------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~  131 (314)
                      |||+|+..              +.++.++++++.  +++ |||+||.++|+.... +..|        .|+.+|..+|.+
T Consensus        94 vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p~~~Y~~sK~~~E~~  171 (362)
T 3sxp_A           94 LFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPENVYGFSKLCMDEF  171 (362)
T ss_dssp             EEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred             EEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCCCCCCCChhHHHHHHHHHH
Confidence            99999853              345788999987  554 999999999987654 4444        599999999999


Q ss_pred             HHhcC--CceEEEecCeeeCCCCCC-----chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCc
Q 021331          132 LESKG--VNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  204 (314)
Q Consensus       132 ~~~~~--~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~  204 (314)
                      ++...  ++++++||+.+|||+...     .++..++..+..+.++.+++++++.++++|++|+|++++.+++++. .| 
T Consensus       172 ~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~-~g-  249 (362)
T 3sxp_A          172 VLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQK-SG-  249 (362)
T ss_dssp             HHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSS-CE-
T ss_pred             HHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCC-CC-
Confidence            98765  789999999999997532     5677788888888888888888899999999999999999998865 45 


Q ss_pred             eEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHH
Q 021331          205 VFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSY  284 (314)
Q Consensus       205 ~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~  284 (314)
                      +||+++++++|+.|+++.+.+.+| +. .+...+..         .+.......+|++|+++.|||.|+++++++|++++
T Consensus       250 ~~~i~~~~~~s~~e~~~~i~~~~g-~~-~~~~~~~~---------~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~  318 (362)
T 3sxp_A          250 VYNVGYSQARSYNEIVSILKEHLG-DF-KVTYIKNP---------YAFFQKHTQAHIEPTILDLDYTPLYDLESGIKDYL  318 (362)
T ss_dssp             EEEESCSCEEEHHHHHHHHHHHHC-CC-EEECCC----------------CCCCBCCHHHHHHHCCCCCCCHHHHHHHHH
T ss_pred             EEEeCCCCCccHHHHHHHHHHHcC-CC-ceEECCCC---------CcCcccceecCHHHHHHHhCCCCCCCHHHHHHHHH
Confidence            999999999999999999999999 54 55444432         02234567789999999999999999999999999


Q ss_pred             hhhhcC
Q 021331          285 NLDFGR  290 (314)
Q Consensus       285 ~~~~~~  290 (314)
                      +|+++.
T Consensus       319 ~~~~~~  324 (362)
T 3sxp_A          319 PHIHAI  324 (362)
T ss_dssp             HHHTCC
T ss_pred             HHHHHH
Confidence            999875

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=1.2e-38  Score=275.06  Aligned_cols=263  Identities=23%  Similarity=0.277  Sum_probs=210.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||+||||+++++.|+++|++|++++|........+.           .++.++.+|++|++++.++++..++|+|||+|
T Consensus         6 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-----------~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a   74 (311)
T 2p5y_A            6 TGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVP-----------KGVPFFRVDLRDKEGVERAFREFRPTHVSHQA   74 (311)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSC-----------TTCCEECCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcc-----------cCeEEEECCCCCHHHHHHHHHhcCCCEEEECc
Confidence            7999999999999999999999999985433221111           46778999999999999998756799999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CCCcEEEEeec-eeecc-CCCCCcc--------CccccchhhHHHHH
Q 021331           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSA-GVYLK-SDLLPHC--------ESRHKGKLNTESVL  132 (314)
Q Consensus        81 ~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~-~v~~~-~~~~~~~--------e~~~~~k~~~e~~~  132 (314)
                      +..                ..++.+++++|.  ++++||++||. .+|+. ....|..        ..|+.+|..+|.++
T Consensus        75 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  154 (311)
T 2p5y_A           75 AQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYL  154 (311)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Confidence            863                234678888876  67899999998 88875 2222221        26999999999987


Q ss_pred             H----hcCCceEEEecCeeeCCCCCC----chhHHHHHHHHcCCCeecC-----CCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          133 E----SKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIP-----GSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       133 ~----~~~~~~~ilR~~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      +    +++++++++||+.+|||+...    .++..++..+..+.++.++     +++.+.++++|++|+|++++.++.++
T Consensus       155 ~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~  234 (311)
T 2p5y_A          155 SVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL  234 (311)
T ss_dssp             HHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC
Confidence            5    468999999999999997532    3466677777778777666     77888899999999999999998764


Q ss_pred             ccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHH
Q 021331          200 KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEG  279 (314)
Q Consensus       200 ~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~  279 (314)
                         +++||+++++.+|+.|+++.+.+.+|.+. .+...+..          +.......+|++|+++ |||.|+++++++
T Consensus       235 ---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~----------~~~~~~~~~d~~k~~~-lg~~p~~~~~~~  299 (311)
T 2p5y_A          235 ---EGIYNVGTGEGHTTREVLMAVAEAAGKAP-EVQPAPPR----------PGDLERSVLSPLKLMA-HGWRPKVGFQEG  299 (311)
T ss_dssp             ---CEEEEESCSCCEEHHHHHHHHHHHHTCCC-CEEEECCC----------TTCCSBCCBCCHHHHT-TTCCCSSCHHHH
T ss_pred             ---CCEEEeCCCCCccHHHHHHHHHHHhCCCC-CceeCCCC----------ccchhhccCCHHHHHH-CCCCCCCCHHHH
Confidence               78999999999999999999999999765 33333321          1122456789999999 999999999999


Q ss_pred             HHHHHhhhhc
Q 021331          280 LADSYNLDFG  289 (314)
Q Consensus       280 l~~~~~~~~~  289 (314)
                      |+++++|+++
T Consensus       300 l~~~~~~~~~  309 (311)
T 2p5y_A          300 IRLTVDHFRG  309 (311)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHHh
Confidence            9999999865

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=2.4e-38  Score=275.40  Aligned_cols=268  Identities=18%  Similarity=0.282  Sum_probs=211.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||+++++.|+++|++|++++|+.......+.           .+++++.+|++|++++.++++..++|+|||+|
T Consensus         7 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a   75 (330)
T 2c20_A            7 CGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAIT-----------EGAKFYNGDLRDKAFLRDVFTQENIEAVMHFA   75 (330)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC-----------TTSEEEECCTTCHHHHHHHHHHSCEEEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcC-----------CCcEEEECCCCCHHHHHHHHhhcCCCEEEECC
Confidence            7999999999999999999999999987654222221           37889999999999999999766899999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHHh
Q 021331           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLES  134 (314)
Q Consensus        81 ~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~~  134 (314)
                      +..                ..++.+++++|.  ++++|||+||.++|+.....+++|        .|+.+|..+|.+++.
T Consensus        76 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  155 (330)
T 2c20_A           76 ADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHW  155 (330)
T ss_dssp             CCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             cccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHH
Confidence            863                235678888887  778999999999998654333332        689999999998854


Q ss_pred             ----cCCceEEEecCeeeCCCC----------CCchhHHHHHHHHc-CCCeecCC------CCCceeeeeeHHHHHHHHH
Q 021331          135 ----KGVNWTSLRPVYIYGPLN----------YNPVEEWFFHRLKA-GRPIPIPG------SGIQVTQLGHVKDLARAFV  193 (314)
Q Consensus       135 ----~~~~~~ilR~~~v~g~~~----------~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~i~~~D~a~~~~  193 (314)
                          ++++++++||+.+|||+.          ...++..+...... +..+.+++      ++++.++++|++|+|++++
T Consensus       156 ~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~  235 (330)
T 2c20_A          156 YSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHF  235 (330)
T ss_dssp             HHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHH
T ss_pred             HHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHH
Confidence                589999999999999962          12345555554443 33455555      5678899999999999999


Q ss_pred             HHhcCCcc--CCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCC
Q 021331          194 QVLGNEKA--SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWK  271 (314)
Q Consensus       194 ~~l~~~~~--~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~  271 (314)
                      .+++++..  .+++||+++++++|+.|+++.+.+.+|.+. .+...+..          +.......+|++|++++|||.
T Consensus       236 ~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~----------~~~~~~~~~d~~k~~~~lG~~  304 (330)
T 2c20_A          236 LGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEI-PAEVAPRR----------AGDPARLVASSQKAKEKLGWD  304 (330)
T ss_dssp             HHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCC-CEEEECCC----------SSCCSEECBCCHHHHHHHCCC
T ss_pred             HHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCC-ceeeCCCC----------CCcccccccCHHHHHHHhCCC
Confidence            99986432  368999999999999999999999999765 33333211          112345678999999999999


Q ss_pred             ccc-ChHHHHHHHHhhhhcC
Q 021331          272 PEF-DLVEGLADSYNLDFGR  290 (314)
Q Consensus       272 ~~~-~~~~~l~~~~~~~~~~  290 (314)
                      |++ +++++|+++++|+.++
T Consensus       305 p~~~~l~~~l~~~~~~~~~~  324 (330)
T 2c20_A          305 PRYVNVKTIIEHAWNWHQKQ  324 (330)
T ss_dssp             CSCCCHHHHHHHHHHHHHHC
T ss_pred             CccCCHHHHHHHHHHHHHHh
Confidence            998 9999999999998774

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=3.6e-38  Score=276.73  Aligned_cols=277  Identities=21%  Similarity=0.227  Sum_probs=215.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh-ccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      ||||||||++|++.|+++|++|++++|+.......+.. ....+.. ...++.++.+|++|++++.++++  ++|+|||+
T Consensus        33 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~  109 (352)
T 1sb8_A           33 TGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDE-VRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GVDYVLHQ  109 (352)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHH-HHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TCSEEEEC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHH-HhhhcccccCCceEEEECCCCCHHHHHHHhc--CCCEEEEC
Confidence            79999999999999999999999999976431100000 0000000 02578999999999999999998  99999999


Q ss_pred             CCCC----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHH
Q 021331           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLE  133 (314)
Q Consensus        80 a~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~  133 (314)
                      |+..                ..++.+++++|.  ++++|||+||.++|+.....|..|        .|+.+|..+|.+++
T Consensus       110 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~  189 (352)
T 1sb8_A          110 AALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYAD  189 (352)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHH
T ss_pred             CcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence            9863                334678888886  778999999999998654433332        68999999999885


Q ss_pred             ----hcCCceEEEecCeeeCCCCCC-----chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC-ccCC
Q 021331          134 ----SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE-KASR  203 (314)
Q Consensus       134 ----~~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~-~~~~  203 (314)
                          +++++++++||+.||||+...     .++..++..+..+.++.+++++++.++++|++|+|++++.++.++ ...+
T Consensus       190 ~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~  269 (352)
T 1sb8_A          190 VFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARN  269 (352)
T ss_dssp             HHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCS
T ss_pred             HHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccccCCC
Confidence                358999999999999997532     356667777778887777788889999999999999999998863 3467


Q ss_pred             ceEEecCCccccHHHHHHHHHHHh---CCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHH
Q 021331          204 QVFNISGEKYVTFDGLARACAKAA---GFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGL  280 (314)
Q Consensus       204 ~~~~i~~~~~~s~~el~~~i~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l  280 (314)
                      ++||+++++++|+.|+++.+.+.+   |.+.+....+.+         ..+.......+|++|++++|||.|+++++++|
T Consensus       270 ~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~---------~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l  340 (352)
T 1sb8_A          270 QVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRD---------FREGDVRHSLADISKAAKLLGYAPKYDVSAGV  340 (352)
T ss_dssp             EEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEEC---------CCTTCCSBCCBCCHHHHHHTCCCCCCCHHHHH
T ss_pred             ceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecC---------CCccchhhccCCHHHHHHHhCCCCCCCHHHHH
Confidence            899999999999999999999999   876521110000         01112245668999999999999999999999


Q ss_pred             HHHHhhhhc
Q 021331          281 ADSYNLDFG  289 (314)
Q Consensus       281 ~~~~~~~~~  289 (314)
                      +++++|+++
T Consensus       341 ~~~~~~~~~  349 (352)
T 1sb8_A          341 ALAMPWYIM  349 (352)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999999865

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=4.7e-38  Score=274.08  Aligned_cols=274  Identities=19%  Similarity=0.202  Sum_probs=212.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh--ccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      ||||||||++|++.|+++|++|++++|+......       ..+..  ...++.++.+|++|++++.++++..++|+|||
T Consensus        20 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih   92 (335)
T 1rpn_A           20 TGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR-------WRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN   92 (335)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC-------HHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc-------cchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEE
Confidence            7999999999999999999999999998654110       00110  02578999999999999999998556899999


Q ss_pred             cCCCC----------------cccHHHHHHhCC--CC-CcEEEEeeceeeccCCCCCccC--------ccccchhhHHHH
Q 021331           79 INGRE----------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESV  131 (314)
Q Consensus        79 ~a~~~----------------~~~~~~~~~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~  131 (314)
                      +|+..                ..++.++++++.  ++ ++||++||.++|+.....++.|        .|+.+|..+|.+
T Consensus        93 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~  172 (335)
T 1rpn_A           93 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWI  172 (335)
T ss_dssp             CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             CccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHHH
Confidence            99863                234678888887  64 8999999999998654433333        599999999998


Q ss_pred             HHh----cCCceEEEecCeeeCCCCCCch----hHHHHHHHHcCCC-eecCCCCCceeeeeeHHHHHHHHHHHhcCCccC
Q 021331          132 LES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  202 (314)
Q Consensus       132 ~~~----~~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~  202 (314)
                      ++.    ++++++++||+.+|||+....+    +..++..+..+.. ...++++++.++++|++|+|++++.++.++.  
T Consensus       173 ~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~--  250 (335)
T 1rpn_A          173 TVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--  250 (335)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--
T ss_pred             HHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC--
Confidence            854    4899999999999999754332    3445555556653 3345788899999999999999999998765  


Q ss_pred             CceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHH
Q 021331          203 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLAD  282 (314)
Q Consensus       203 ~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~  282 (314)
                      +++||+++++++|+.|+++.+.+.+|.+.+....++...       ..+.......+|++|++++|||.|+++++++|++
T Consensus       251 ~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~  323 (335)
T 1rpn_A          251 ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAF-------FRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRM  323 (335)
T ss_dssp             CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGG-------CCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHH
T ss_pred             CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccc-------cCCCcchhhcCCHHHHHHhcCCCcCCCHHHHHHH
Confidence            479999999999999999999999997532122222111       1222334567899999999999999999999999


Q ss_pred             HHhhhhcC
Q 021331          283 SYNLDFGR  290 (314)
Q Consensus       283 ~~~~~~~~  290 (314)
                      +++|++++
T Consensus       324 ~~~~~~~~  331 (335)
T 1rpn_A          324 MVEADLRR  331 (335)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99998763

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=3e-38  Score=276.32  Aligned_cols=278  Identities=19%  Similarity=0.225  Sum_probs=214.6

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh-hhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~l~~~~~~~~~d~vi~   78 (314)
                      ||||||||++++++|+++ |++|++++|+.........          ..++.++.+|++|. +.+.++++  ++|+|||
T Consensus         6 tGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~--~~d~vih   73 (345)
T 2bll_A            6 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP   73 (345)
T ss_dssp             ETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT----------CTTEEEEECCTTTCSHHHHHHHH--HCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhc----------CCCeEEEeccccCcHHHHHhhcc--CCCEEEE
Confidence            799999999999999998 8999999998765332222          25789999999984 56888888  8999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC-CCCcEEEEeeceeeccCCCCCccC---------------ccccchh
Q 021331           79 INGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCE---------------SRHKGKL  126 (314)
Q Consensus        79 ~a~~~----------------~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e---------------~~~~~k~  126 (314)
                      +|+..                ..++.+++++|. ..++|||+||.++|+.....++.|               .|+.+|.
T Consensus        74 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~  153 (345)
T 2bll_A           74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ  153 (345)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHH
T ss_pred             cccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHH
Confidence            99863                234678888877 228999999999998654333222               5889999


Q ss_pred             hHHHHHH----hcCCceEEEecCeeeCCCCC---------CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHH
Q 021331          127 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  193 (314)
Q Consensus       127 ~~e~~~~----~~~~~~~ilR~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  193 (314)
                      .+|.+++    +++++++++||+.||||+..         ..++..++..+..+.++.+++++++.++++|++|+|++++
T Consensus       154 ~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  233 (345)
T 2bll_A          154 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY  233 (345)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHH
Confidence            9999884    45899999999999999753         2355677777788888877788888999999999999999


Q ss_pred             HHhcCCc--cCCceEEecCCc-cccHHHHHHHHHHHhCCCCCeeeecCCccccc--CCCC---cccCCCcceeecHHhHH
Q 021331          194 QVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKAAGFPEPELVHYNPKEFDF--GKKK---AFPFRDQHFFASVEKAK  265 (314)
Q Consensus       194 ~~l~~~~--~~~~~~~i~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~k~~  265 (314)
                      .++.++.  ..+++||+++++ .+|+.|+++.+.+.+|.+. .....+......  ....   ...........|++|++
T Consensus       234 ~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  312 (345)
T 2bll_A          234 RIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP-LRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAH  312 (345)
T ss_dssp             HHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCT-TGGGSCCCCCEEEC------------CCCCCBCCHHHH
T ss_pred             HHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCc-ccccCccccccccccchhhccccccchhhhcccHHHHH
Confidence            9998754  357899999986 8999999999999999764 222233221100  0000   00011245667999999


Q ss_pred             hhcCCCcccChHHHHHHHHhhhhcCC
Q 021331          266 HVLGWKPEFDLVEGLADSYNLDFGRG  291 (314)
Q Consensus       266 ~~lg~~~~~~~~~~l~~~~~~~~~~~  291 (314)
                      ++|||.|+++++++|+++++|+.++.
T Consensus       313 ~~lG~~p~~~l~~~l~~~~~~~~~~~  338 (345)
T 2bll_A          313 RCLDWEPKIDMQETIDETLDFFLRTV  338 (345)
T ss_dssp             HHHCCCCCCCHHHHHHHHHHHHHHHS
T ss_pred             HhcCCCccccHHHHHHHHHHHHHHcC
Confidence            99999999999999999999987643

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=1.2e-37  Score=271.77  Aligned_cols=272  Identities=19%  Similarity=0.291  Sum_probs=215.7

Q ss_pred             CCcccccHHHHHHHHHHC---C---CeEEEEEcCCccc-ccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCc
Q 021331            1 MGGTRFIGVFLSRLLVKE---G---HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~---g---~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~   73 (314)
                      ||||||||+++++.|+++   |   ++|++++|+.... ...+.     .+. ...++.++.+|++|++++.+++.  ++
T Consensus         6 TGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~-----~~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~   77 (337)
T 1r6d_A            6 TGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLA-----PVD-ADPRLRFVHGDIRDAGLLARELR--GV   77 (337)
T ss_dssp             ETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGG-----GGT-TCTTEEEEECCTTCHHHHHHHTT--TC
T ss_pred             ECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhh-----hcc-cCCCeEEEEcCCCCHHHHHHHhc--CC
Confidence            799999999999999997   8   9999999875321 11110     000 02578999999999999999997  99


Q ss_pred             cEEEEcCCCC----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhh
Q 021331           74 DVVYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLN  127 (314)
Q Consensus        74 d~vi~~a~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~  127 (314)
                      |+|||+|+..                ..++.+++++|.  ++++|||+||.++|+.....++.|        .|+.+|..
T Consensus        78 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~  157 (337)
T 1r6d_A           78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAG  157 (337)
T ss_dssp             CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHH
T ss_pred             CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHH
Confidence            9999999863                345778888887  678999999999998643222222        69999999


Q ss_pred             HHHHHH----hcCCceEEEecCeeeCCCCC-CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccC
Q 021331          128 TESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  202 (314)
Q Consensus       128 ~e~~~~----~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~  202 (314)
                      +|.+++    +++++++++||+.+|||+.. ..++..++..+..+.++.+++++++.++++|++|+|++++.++.++. .
T Consensus       158 ~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~  236 (337)
T 1r6d_A          158 SDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-A  236 (337)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-T
T ss_pred             HHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC-C
Confidence            999875    35899999999999999754 34566777777888887777888889999999999999999997654 5


Q ss_pred             CceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHH
Q 021331          203 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLAD  282 (314)
Q Consensus       203 ~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~  282 (314)
                      +++||+++++++|+.|+++.+.+.+|.+.+.+...+.          .+.....+.+|++|++++|||.|+++++++|++
T Consensus       237 g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----------~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~  306 (337)
T 1r6d_A          237 GEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVAD----------RKGHDLRYSLDGGKIERELGYRPQVSFADGLAR  306 (337)
T ss_dssp             TCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECC----------CTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHH
T ss_pred             CCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecCC----------CCCCcceeecCHHHHHHHcCCCCCCCHHHHHHH
Confidence            7899999999999999999999999986432322211          111123456899999999999999999999999


Q ss_pred             HHhhhhcCC
Q 021331          283 SYNLDFGRG  291 (314)
Q Consensus       283 ~~~~~~~~~  291 (314)
                      +++|++++.
T Consensus       307 ~~~~~~~~~  315 (337)
T 1r6d_A          307 TVRWYRENR  315 (337)
T ss_dssp             HHHHHHHCH
T ss_pred             HHHHHHhch
Confidence            999998754

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=2.7e-38  Score=280.09  Aligned_cols=264  Identities=20%  Similarity=0.236  Sum_probs=213.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|++.|+++|++|++++|+........           ..++.++.+|++|++++.++++  ++|+|||+|
T Consensus        35 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~v~~~~~Dl~d~~~~~~~~~--~~d~Vih~A  101 (379)
T 2c5a_A           35 TGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-----------MFCDEFHLVDLRVMENCLKVTE--GVDHVFNLA  101 (379)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-----------GTCSEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc-----------cCCceEEECCCCCHHHHHHHhC--CCCEEEECc
Confidence            799999999999999999999999999875522111           2578899999999999999998  999999999


Q ss_pred             CCCc-----------------ccHHHHHHhCC--CCCcEEEEeeceeeccCCC-----C--------Cc--cCccccchh
Q 021331           81 GREA-----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDL-----L--------PH--CESRHKGKL  126 (314)
Q Consensus        81 ~~~~-----------------~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~-----~--------~~--~e~~~~~k~  126 (314)
                      +...                 .++.++++++.  ++++|||+||.++|+....     .        +.  ...|+.+|.
T Consensus       102 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~  181 (379)
T 2c5a_A          102 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL  181 (379)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred             eecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHH
Confidence            8532                 23678888876  7789999999999975321     0        11  126899999


Q ss_pred             hHHHHHH----hcCCceEEEecCeeeCCCCCC-----chhHHHHHHHHcCCC-eecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          127 NTESVLE----SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       127 ~~e~~~~----~~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      .+|.+++    +++++++++||+.+|||+...     .++..++..+..+.+ +.+++++++.++++|++|+|++++.++
T Consensus       182 ~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l  261 (379)
T 2c5a_A          182 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT  261 (379)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHh
Confidence            9999875    358999999999999997532     256677777777765 777788888999999999999999999


Q ss_pred             cCCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccCh
Q 021331          197 GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDL  276 (314)
Q Consensus       197 ~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~  276 (314)
                      +++  .+++||+++++.+|+.|+++.+.+.+|.+. .+...+...           ......+|++|++++|||.|++++
T Consensus       262 ~~~--~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~p~~~-----------~~~~~~~d~~k~~~~lG~~p~~~l  327 (379)
T 2c5a_A          262 KSD--FREPVNIGSDEMVSMNEMAEMVLSFEEKKL-PIHHIPGPE-----------GVRGRNSDNNLIKEKLGWAPNMRL  327 (379)
T ss_dssp             HSS--CCSCEEECCCCCEEHHHHHHHHHHTTTCCC-CEEEECCCC-----------CCSBCEECCHHHHHHHSCCCCCCH
T ss_pred             hcc--CCCeEEeCCCCccCHHHHHHHHHHHhCCCC-ceeeCCCCC-----------CcccccCCHHHHHHHhCCCCCCCH
Confidence            876  467999999999999999999999999875 444444321           123456899999999999999999


Q ss_pred             HHHHHHHHhhhhcCC
Q 021331          277 VEGLADSYNLDFGRG  291 (314)
Q Consensus       277 ~~~l~~~~~~~~~~~  291 (314)
                      +++|+++++|++++.
T Consensus       328 ~e~l~~~~~~~~~~~  342 (379)
T 2c5a_A          328 KEGLRITYFWIKEQI  342 (379)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhH
Confidence            999999999987753

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.7e-38  Score=274.63  Aligned_cols=258  Identities=16%  Similarity=0.163  Sum_probs=209.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|++.|+++|+      +....                ..++.++.+|++|++.+.++++..++|+|||+|
T Consensus        12 tGatG~iG~~l~~~L~~~g~------~~~~~----------------~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A   69 (319)
T 4b8w_A           12 TGGSGLVGKAIQKVVADGAG------LPGED----------------WVFVSSKDADLTDTAQTRALFEKVQPTHVIHLA   69 (319)
T ss_dssp             ETCSSHHHHHHHHHHHTTTC------CTTCE----------------EEECCTTTCCTTSHHHHHHHHHHSCCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhcCC------ccccc----------------ccccCceecccCCHHHHHHHHhhcCCCEEEECc
Confidence            79999999999999999998      11111                134555678999999999999856699999999


Q ss_pred             CCC-----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC-------------ccccchhhH
Q 021331           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE-------------SRHKGKLNT  128 (314)
Q Consensus        81 ~~~-----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e-------------~~~~~k~~~  128 (314)
                      +..                 ..++.+++++|.  ++++|||+||.++|+.....|+.|             .|+.+|..+
T Consensus        70 ~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  149 (319)
T 4b8w_A           70 AMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMI  149 (319)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHH
T ss_pred             eecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHH
Confidence            863                 234678899987  788999999999998765544433             388999999


Q ss_pred             HHHHHh----cCCceEEEecCeeeCCCCC-----CchhHHHHHH----HHcCCCeecCCCCCceeeeeeHHHHHHHHHHH
Q 021331          129 ESVLES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHR----LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  195 (314)
Q Consensus       129 e~~~~~----~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  195 (314)
                      |++++.    ++++++++||+.+|||+..     ..+++.++..    +..+.++.+++++++.++++|++|+|++++.+
T Consensus       150 E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~  229 (319)
T 4b8w_A          150 DVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWV  229 (319)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHH
Confidence            998754    7899999999999999753     2355666666    77888888889999999999999999999999


Q ss_pred             hcCCc-cCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCccc
Q 021331          196 LGNEK-ASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF  274 (314)
Q Consensus       196 l~~~~-~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~  274 (314)
                      +.++. ..+++||+++++++|+.|+++.+.+.+|.+. .+...+..          +.......+|++|++++|||.|.+
T Consensus       230 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~----------~~~~~~~~~d~~k~~~~lg~~p~~  298 (319)
T 4b8w_A          230 LREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHG-EVTFDTTK----------SDGQFKKTASNSKLRTYLPDFRFT  298 (319)
T ss_dssp             HHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCS-CEEEETTS----------CCCCSCCCBCCHHHHHHCTTCCCC
T ss_pred             HhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCC-cEEeCCCC----------CcCcccccCCHHHHHHhcCCCCCC
Confidence            98743 3567999999999999999999999999765 44433321          112244568999999999999999


Q ss_pred             ChHHHHHHHHhhhhcCC
Q 021331          275 DLVEGLADSYNLDFGRG  291 (314)
Q Consensus       275 ~~~~~l~~~~~~~~~~~  291 (314)
                      +++++|+++++|++++.
T Consensus       299 ~~~~~l~~~~~~~~~~~  315 (319)
T 4b8w_A          299 PFKQAVKETCAWFTDNY  315 (319)
T ss_dssp             CHHHHHHHHHHHHHHSC
T ss_pred             CHHHHHHHHHHHHHHHH
Confidence            99999999999988753

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=1.9e-37  Score=270.40  Aligned_cols=271  Identities=22%  Similarity=0.282  Sum_probs=212.2

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcc-cccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      ||||||||+++++.|+++|  ++|++++|.... ....+..     +.. ..++.++.+|++|++++.+++.  ++|+||
T Consensus         9 TGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~-----~~~-~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi   80 (336)
T 2hun_A            9 TGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKD-----LED-DPRYTFVKGDVADYELVKELVR--KVDGVV   80 (336)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTT-----TTT-CTTEEEEECCTTCHHHHHHHHH--TCSEEE
T ss_pred             ECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhh-----hcc-CCceEEEEcCCCCHHHHHHHhh--CCCEEE
Confidence            7999999999999999996  899999987522 1111110     000 2578999999999999999997  999999


Q ss_pred             EcCCCC----------------cccHHHHHHhCC--CC-CcEEEEeeceeeccCCCCCccC--------ccccchhhHHH
Q 021331           78 DINGRE----------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTES  130 (314)
Q Consensus        78 ~~a~~~----------------~~~~~~~~~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~  130 (314)
                      |+|+..                ..++.++++++.  +. ++|||+||.++|+.....++.|        .|+.+|..+|.
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  160 (336)
T 2hun_A           81 HLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDM  160 (336)
T ss_dssp             ECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHH
T ss_pred             ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHH
Confidence            999863                234678888877  43 6999999999998643222222        69999999999


Q ss_pred             HHHh----cCCceEEEecCeeeCCCCC-CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCce
Q 021331          131 VLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV  205 (314)
Q Consensus       131 ~~~~----~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~  205 (314)
                      +++.    ++++++++||+.||||+.. ..++..++..+..+..+++++++++.++++|++|+|++++.+++++. .+++
T Consensus       161 ~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~g~~  239 (336)
T 2hun_A          161 LVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE-SREI  239 (336)
T ss_dssp             HHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC-TTCE
T ss_pred             HHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC-CCCE
Confidence            8753    6899999999999999754 34566777777888888877888889999999999999999997654 5789


Q ss_pred             EEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHh
Q 021331          206 FNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYN  285 (314)
Q Consensus       206 ~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~  285 (314)
                      ||+++++.+|+.|+++.+.+.+|.+.+.+...+.          .+.....+.+|++|++++|||.|+++++++|+++++
T Consensus       240 ~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----------~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~  309 (336)
T 2hun_A          240 YNISAGEEKTNLEVVKIILRLMGKGEELIELVED----------RPGHDLRYSLDSWKITRDLKWRPKYTFDEGIKKTID  309 (336)
T ss_dssp             EEECCSCEECHHHHHHHHHHHTTCCSTTEEEECC----------CTTCCCCCCBCCHHHHHHHCCCCSSCHHHHHHHHHH
T ss_pred             EEeCCCCcccHHHHHHHHHHHhCCCcccccccCC----------CCCchhhhcCCHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence            9999999999999999999999986533322211          111223456899999999999999999999999999


Q ss_pred             hhhcC
Q 021331          286 LDFGR  290 (314)
Q Consensus       286 ~~~~~  290 (314)
                      |++++
T Consensus       310 ~~~~~  314 (336)
T 2hun_A          310 WYLKN  314 (336)
T ss_dssp             HHHHT
T ss_pred             HHHhC
Confidence            99875

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=6e-38  Score=277.74  Aligned_cols=266  Identities=19%  Similarity=0.290  Sum_probs=211.2

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      ||||||||++|++.|+++| ++|++++|+.......+..         ..++.++.+|++|++++.++++  ++|+|||+
T Consensus        38 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~---------~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vih~  106 (377)
T 2q1s_A           38 VGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPD---------HPAVRFSETSITDDALLASLQD--EYDYVFHL  106 (377)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCC---------CTTEEEECSCTTCHHHHHHCCS--CCSEEEEC
T ss_pred             ECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccC---------CCceEEEECCCCCHHHHHHHhh--CCCEEEEC
Confidence            7999999999999999999 9999999986543222210         2578999999999999999998  99999999


Q ss_pred             CCCC----------------cccHHHHHHhCC---CCCcEEEEeeceeeccCCC--------C---Cc---cCccccchh
Q 021331           80 NGRE----------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSDL--------L---PH---CESRHKGKL  126 (314)
Q Consensus        80 a~~~----------------~~~~~~~~~~~~---~~~~~i~~Ss~~v~~~~~~--------~---~~---~e~~~~~k~  126 (314)
                      |+..                ..++.+++++|.   ++++|||+||.++|+....        .   |.   ...|+.+|.
T Consensus       107 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~  186 (377)
T 2q1s_A          107 ATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKI  186 (377)
T ss_dssp             CCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHH
T ss_pred             CCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHH
Confidence            9863                235778899887   3679999999999974321        1   11   126899999


Q ss_pred             hHHHHHHh----cCCceEEEecCeeeCCCC---------C-----CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHH
Q 021331          127 NTESVLES----KGVNWTSLRPVYIYGPLN---------Y-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  188 (314)
Q Consensus       127 ~~e~~~~~----~~~~~~ilR~~~v~g~~~---------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  188 (314)
                      .+|.+++.    ++++++++||+.||||+.         .     ..++..++..+..+.++.+++++++.++++|++|+
T Consensus       187 ~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dv  266 (377)
T 2q1s_A          187 FGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDV  266 (377)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHH
Confidence            99998864    489999999999999976         2     34677778888888887777888899999999999


Q ss_pred             HHH-HHHHhcCCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCc-ceeecHHhHHh
Q 021331          189 ARA-FVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQ-HFFASVEKAKH  266 (314)
Q Consensus       189 a~~-~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~k~~~  266 (314)
                      |++ ++.+++++. .+ +||+++++++|+.|+++.+.+.+|.+. .+...+..          +.... ...+|++|+++
T Consensus       267 a~a~i~~~~~~~~-~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~-~~~~~p~~----------~~~~~~~~~~d~~k~~~  333 (377)
T 2q1s_A          267 ANGLIACAADGTP-GG-VYNIASGKETSIADLATKINEITGNNT-ELDRLPKR----------PWDNSGKRFGSPEKARR  333 (377)
T ss_dssp             HHHHHHHHHHCCT-TE-EEECCCCCCEEHHHHHHHHHHHHTCCS-CCCCCCCC----------GGGCC-CCCCCCHHHHH
T ss_pred             HHHHHHHHHhcCC-CC-eEEecCCCceeHHHHHHHHHHHhCCCC-CceeCCCC----------ccccccccccCHHHHHH
Confidence            999 999998765 56 999999999999999999999999765 33322211          11223 67789999999


Q ss_pred             hcCCCcccChHHHHHHHHhhhhcC
Q 021331          267 VLGWKPEFDLVEGLADSYNLDFGR  290 (314)
Q Consensus       267 ~lg~~~~~~~~~~l~~~~~~~~~~  290 (314)
                      +|||.|+++++++|+++++|+.++
T Consensus       334 ~lG~~p~~~l~e~l~~~~~~~~~~  357 (377)
T 2q1s_A          334 ELGFSADVSIDDGLRKTIEWTKAN  357 (377)
T ss_dssp             HHCCCCCCCHHHHHHHHHHHHHHT
T ss_pred             HcCCCCCCCHHHHHHHHHHHHHHh
Confidence            999999999999999999998764

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=3.9e-38  Score=268.66  Aligned_cols=248  Identities=19%  Similarity=0.154  Sum_probs=204.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCC-ccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG-FDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~-~d~vi~~   79 (314)
                      || +||||++|++.|+++|++|++++|+.+..               ..+++++.+|++|++.+.++++  + +|+|||+
T Consensus         9 tG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------------~~~~~~~~~Dl~d~~~~~~~~~--~~~d~vih~   70 (286)
T 3gpi_A            9 AG-CGDLGLELARRLTAQGHEVTGLRRSAQPM---------------PAGVQTLIADVTRPDTLASIVH--LRPEILVYC   70 (286)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC---------------CTTCCEEECCTTCGGGCTTGGG--GCCSEEEEC
T ss_pred             EC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------ccCCceEEccCCChHHHHHhhc--CCCCEEEEe
Confidence            68 59999999999999999999999987652               1678899999999999999987  5 9999999


Q ss_pred             CCC-----------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHHhcCCc
Q 021331           80 NGR-----------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLESKGVN  138 (314)
Q Consensus        80 a~~-----------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~~~~~~  138 (314)
                      |+.           |..++.+++++|.  ++++|||+||.++|+.....++.|        .|+.+|..+|++ +++ ++
T Consensus        71 a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-~~  148 (286)
T 3gpi_A           71 VAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA-YS  148 (286)
T ss_dssp             HHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG-SS
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc-CC
Confidence            874           4667899999998  778999999999998765444333        689999999999 777 99


Q ss_pred             eEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC--ccCCceEEecCCccccH
Q 021331          139 WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYVTF  216 (314)
Q Consensus       139 ~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~--~~~~~~~~i~~~~~~s~  216 (314)
                      ++++||+.+|||+..     .++..+.. .  ..++.++..++++|++|+|++++.++.++  ...+++||+++++++|+
T Consensus       149 ~~ilR~~~v~G~~~~-----~~~~~~~~-~--~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  220 (286)
T 3gpi_A          149 STILRFSGIYGPGRL-----RMIRQAQT-P--EQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPV  220 (286)
T ss_dssp             EEEEEECEEEBTTBC-----HHHHHTTC-G--GGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEEH
T ss_pred             eEEEecccccCCCch-----hHHHHHHh-c--ccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCCH
Confidence            999999999999643     23344444 2  23367788999999999999999999874  34688999999999999


Q ss_pred             HHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCccc-ChHHHHHHHHhhhhcCC
Q 021331          217 DGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF-DLVEGLADSYNLDFGRG  291 (314)
Q Consensus       217 ~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~-~~~~~l~~~~~~~~~~~  291 (314)
                      .|+++.+.+.+|.+. .+...+             .......+|++|++ +|||.|++ +++++|+++++|+....
T Consensus       221 ~e~~~~i~~~~g~~~-~~~~~~-------------~~~~~~~~d~~k~~-~lG~~p~~~~l~e~l~~~~~~~~~~~  281 (286)
T 3gpi_A          221 HDLLRWLADRQGIAY-PAGATP-------------PVQGNKKLSNARLL-ASGYQLIYPDYVSGYGALLAAMREGH  281 (286)
T ss_dssp             HHHHHHHHHHTTCCC-CCSCCC-------------CBCSSCEECCHHHH-HTTCCCSSCSHHHHHHHHHHHHTC--
T ss_pred             HHHHHHHHHHcCCCC-CCCCCc-------------ccCCCeEeeHHHHH-HcCCCCcCCcHHHHHHHHHHHHhccc
Confidence            999999999999765 222111             12356678999998 89999999 69999999999977654

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=1.7e-37  Score=272.01  Aligned_cols=279  Identities=19%  Similarity=0.195  Sum_probs=211.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCC-CCCCchhhhh-ccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL-PGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      ||||||||+++++.|+++|++|++++|+........ .......+.. ...++.++.+|++|++++.++++..++|+|||
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih   87 (348)
T 1ek6_A            8 TGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIH   87 (348)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            799999999999999999999999998654300000 0000001111 12478899999999999999997668999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCc---------cCccccchhhHHHH
Q 021331           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPH---------CESRHKGKLNTESV  131 (314)
Q Consensus        79 ~a~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~---------~e~~~~~k~~~e~~  131 (314)
                      +|+..                ..++.+++++|.  ++++|||+||.++|+.....++         ...|+.+|..+|.+
T Consensus        88 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~  167 (348)
T 1ek6_A           88 FAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM  167 (348)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHH
T ss_pred             CCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHH
Confidence            99863                234678888876  7789999999999975432221         22689999999998


Q ss_pred             HHhc---C--CceEEEecCeeeCCCC-----------CCchhHHHHHHHH-cCCCeecCC------CCCceeeeeeHHHH
Q 021331          132 LESK---G--VNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLK-AGRPIPIPG------SGIQVTQLGHVKDL  188 (314)
Q Consensus       132 ~~~~---~--~~~~ilR~~~v~g~~~-----------~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i~~~D~  188 (314)
                      ++..   +  ++++++||+.+|||+.           ...++..+...+. .+..+.+++      ++++.++++|++|+
T Consensus       168 ~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dv  247 (348)
T 1ek6_A          168 IRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDL  247 (348)
T ss_dssp             HHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHH
T ss_pred             HHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHH
Confidence            8642   4  9999999999999842           1335566666665 556666655      56788999999999


Q ss_pred             HHHHHHHhcCCc-cCC-ceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHh
Q 021331          189 ARAFVQVLGNEK-ASR-QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKH  266 (314)
Q Consensus       189 a~~~~~~l~~~~-~~~-~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  266 (314)
                      |++++.+++++. ..+ ++||+++++++|+.|+++.+.+.+|.+. .+...+..          +.......+|++|+++
T Consensus       248 a~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~----------~~~~~~~~~d~~k~~~  316 (348)
T 1ek6_A          248 AKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKI-PYKVVARR----------EGDVAACYANPSLAQE  316 (348)
T ss_dssp             HHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCC-CEEEECCC----------TTCCSEECBCCHHHHH
T ss_pred             HHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCC-ceeeCCCC----------CccchhhccCHHHHHH
Confidence            999999997642 234 7999999999999999999999999765 33333211          1123456789999999


Q ss_pred             hcCCCcccChHHHHHHHHhhhhcC
Q 021331          267 VLGWKPEFDLVEGLADSYNLDFGR  290 (314)
Q Consensus       267 ~lg~~~~~~~~~~l~~~~~~~~~~  290 (314)
                      +|||.|+++++++++++++|++++
T Consensus       317 ~lG~~p~~~l~~~l~~~~~w~~~~  340 (348)
T 1ek6_A          317 ELGWTAALGLDRMCEDLWRWQKQN  340 (348)
T ss_dssp             TTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             hcCCCCCCCHHHHHHHHHHHHHhc
Confidence            999999999999999999998764

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=2.4e-37  Score=270.98  Aligned_cols=270  Identities=18%  Similarity=0.238  Sum_probs=214.3

Q ss_pred             CCcccccHHHHHHHHHHC--CCeEEEEEcCCccc-ccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      ||||||||+++++.|+++  |++|++++|+.... ...+.     .+.  ..++.++.+|++|++++.++++  ++|+||
T Consensus        10 TGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~-----~~~--~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi   80 (348)
T 1oc2_A           10 TGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLE-----AIL--GDRVELVVGDIADAELVDKLAA--KADAIV   80 (348)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTG-----GGC--SSSEEEEECCTTCHHHHHHHHT--TCSEEE
T ss_pred             eCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHh-----hhc--cCCeEEEECCCCCHHHHHHHhh--cCCEEE
Confidence            799999999999999999  89999999975321 11111     000  2578999999999999999998  889999


Q ss_pred             EcCCCC----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCC------------CCccC--------
Q 021331           78 DINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL------------LPHCE--------  119 (314)
Q Consensus        78 ~~a~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~------------~~~~e--------  119 (314)
                      |+|+..                ..++.+++++|.  ++ +|||+||.++|+....            .++.|        
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~  159 (348)
T 1oc2_A           81 HYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSS  159 (348)
T ss_dssp             ECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCS
T ss_pred             ECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCC
Confidence            999864                234778888887  66 9999999999975421            12222        


Q ss_pred             ccccchhhHHHHHHh----cCCceEEEecCeeeCCCCC-CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHH
Q 021331          120 SRHKGKLNTESVLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       120 ~~~~~k~~~e~~~~~----~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                      .|+.+|..+|.+++.    ++++++++||+.+|||+.. ..++..++..+..+.++.+++++++.++++|++|+|++++.
T Consensus       160 ~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  239 (348)
T 1oc2_A          160 PYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWA  239 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHH
Confidence            699999999998754    5899999999999999764 34666777777778777777888889999999999999999


Q ss_pred             HhcCCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCccc
Q 021331          195 VLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF  274 (314)
Q Consensus       195 ~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~  274 (314)
                      +++++. .+++||+++++++|+.|+++.+.+.+|.+.+.+...+.          .+.....+.+|++|++++|||.|++
T Consensus       240 ~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----------~~~~~~~~~~d~~k~~~~lG~~p~~  308 (348)
T 1oc2_A          240 ILTKGR-MGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTD----------RAGHDLRYAIDASKLRDELGWTPQF  308 (348)
T ss_dssp             HHHHCC-TTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECC----------CTTCCCBCCBCCHHHHHHHCCCCSC
T ss_pred             HhhCCC-CCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCC----------CCCcccccccCHHHHHHHcCCCCCC
Confidence            997653 57899999999999999999999999986532222211          1112234568999999999999999


Q ss_pred             C-hHHHHHHHHhhhhcCC
Q 021331          275 D-LVEGLADSYNLDFGRG  291 (314)
Q Consensus       275 ~-~~~~l~~~~~~~~~~~  291 (314)
                      + ++++|+++++|+.++.
T Consensus       309 ~~~~~~l~~~~~~~~~~~  326 (348)
T 1oc2_A          309 TDFSEGLEETIQWYTDNQ  326 (348)
T ss_dssp             CCHHHHHHHHHHHHHHTH
T ss_pred             CcHHHHHHHHHHHHHHhh
Confidence            8 9999999999998753

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=1.7e-37  Score=272.98  Aligned_cols=273  Identities=15%  Similarity=0.191  Sum_probs=212.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|++.|+++|++|++++|+.........     .+ ....++.++.+|++|++++.++++..++|+|||+|
T Consensus        15 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   88 (357)
T 1rkx_A           15 TGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFE-----TA-RVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA   88 (357)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHH-----HT-TTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhH-----hh-ccCCceEEEEccccCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999999999999998755221100     00 01257899999999999999999844599999999


Q ss_pred             CCC----------------cccHHHHHHhCC--C-CCcEEEEeeceeeccCCC-CCcc--------CccccchhhHHHHH
Q 021331           81 GRE----------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDL-LPHC--------ESRHKGKLNTESVL  132 (314)
Q Consensus        81 ~~~----------------~~~~~~~~~~~~--~-~~~~i~~Ss~~v~~~~~~-~~~~--------e~~~~~k~~~e~~~  132 (314)
                      +..                ..++.+++++|.  + +++|||+||.++|+.... .+..        ..|+.+|..+|.++
T Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  168 (357)
T 1rkx_A           89 AQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVT  168 (357)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHH
T ss_pred             CCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHHH
Confidence            852                334677888876  4 789999999999985432 1222        16999999999988


Q ss_pred             Hhc-------------CCceEEEecCeeeCCCCC--CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          133 ESK-------------GVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       133 ~~~-------------~~~~~ilR~~~v~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      +..             +++++++||+.||||+..  ..++..++..+..+.++.++ +++..++++|++|+|++++.++.
T Consensus       169 ~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~v~v~Dva~a~~~~~~  247 (357)
T 1rkx_A          169 SSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIR-NPHAIRPWQHVLEPLSGYLLLAQ  247 (357)
T ss_dssp             HHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECS-CTTCEECCEETHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEEC-CCCCeeccEeHHHHHHHHHHHHH
Confidence            542             899999999999999753  35777788888888877764 56788999999999999999887


Q ss_pred             C----CccCCceEEecCC--ccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCC
Q 021331          198 N----EKASRQVFNISGE--KYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWK  271 (314)
Q Consensus       198 ~----~~~~~~~~~i~~~--~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~  271 (314)
                      +    +...+++||++++  +++|+.|+++.+.+.+|.+. .+...+..         .+.......+|++|++++|||.
T Consensus       248 ~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~---------~~~~~~~~~~d~~k~~~~lG~~  317 (357)
T 1rkx_A          248 KLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGA-SWQLDGNA---------HPHEAHYLKLDCSKAKMQLGWH  317 (357)
T ss_dssp             HHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTC-CEEC----------------CCCCCCBCCHHHHHHHCCC
T ss_pred             hhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCC-ccccCCCC---------CCcCcccccCCHHHHHHHhCCC
Confidence            4    2245789999984  67999999999999999765 33211110         1222355678999999999999


Q ss_pred             cccChHHHHHHHHhhhhcC
Q 021331          272 PEFDLVEGLADSYNLDFGR  290 (314)
Q Consensus       272 ~~~~~~~~l~~~~~~~~~~  290 (314)
                      |+++++++|+++++|+.++
T Consensus       318 p~~~l~e~l~~~~~~~~~~  336 (357)
T 1rkx_A          318 PRWNLNTTLEYIVGWHKNW  336 (357)
T ss_dssp             CCCCHHHHHHHHHHHHHHH
T ss_pred             cCCcHHHHHHHHHHHHHHH
Confidence            9999999999999998764

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=5.1e-38  Score=272.14  Aligned_cols=262  Identities=20%  Similarity=0.270  Sum_probs=211.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcc---cccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP---IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      ||||||+|++|++.|+++|++|++++|+...   ....+....      ...+++++.+|+.            ++|+||
T Consensus        13 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~------------~~d~vi   74 (321)
T 3vps_A           13 TGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFL------EKPVLELEERDLS------------DVRLVY   74 (321)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEE------CSCGGGCCHHHHT------------TEEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhc------cCCCeeEEeCccc------------cCCEEE
Confidence            7999999999999999999999999998762   111111000      0134455555554            799999


Q ss_pred             EcCCCC---------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHH
Q 021331           78 DINGRE---------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVL  132 (314)
Q Consensus        78 ~~a~~~---------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~  132 (314)
                      |+|+..               ..++.+++++|.  ++++|||+||.++|+.....++.|        .|+.+|..+|.++
T Consensus        75 ~~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  154 (321)
T 3vps_A           75 HLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVA  154 (321)
T ss_dssp             ECCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             ECCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            999853               345688999987  789999999999998765544444        6899999999988


Q ss_pred             Hh----cCC-ceEEEecCeeeCCCCC-CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceE
Q 021331          133 ES----KGV-NWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  206 (314)
Q Consensus       133 ~~----~~~-~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~  206 (314)
                      +.    +++ +++++||+.+|||+.. ..++..++..+..+.++.++++++..++++|++|+|++++.++.++.. | +|
T Consensus       155 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~-g-~~  232 (321)
T 3vps_A          155 GAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP-S-VV  232 (321)
T ss_dssp             HHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC-S-EE
T ss_pred             HHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC-C-eE
Confidence            65    588 9999999999999754 356778888888888888888899999999999999999999998764 6 99


Q ss_pred             EecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCc-ccChHHHHHHHHh
Q 021331          207 NISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKP-EFDLVEGLADSYN  285 (314)
Q Consensus       207 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~-~~~~~~~l~~~~~  285 (314)
                      |+++++++|+.|+++.+. .+|.+. .+...+..          +.......+|++|++++|||.| +++++++|+++++
T Consensus       233 ~i~~~~~~s~~e~~~~i~-~~g~~~-~~~~~~~~----------~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~  300 (321)
T 3vps_A          233 NFGSGQSLSVNDVIRILQ-ATSPAA-EVARKQPR----------PNEITEFRADTALQTRQIGERSGGIGIEEGIRLTLE  300 (321)
T ss_dssp             EESCSCCEEHHHHHHHHH-TTCTTC-EEEEECCC----------TTCCSBCCBCCHHHHHHHCCCSCCCCHHHHHHHHHH
T ss_pred             EecCCCcccHHHHHHHHH-HhCCCC-ccccCCCC----------CCCcceeeccHHHHHHHhCCCCCcCCHHHHHHHHHH
Confidence            999999999999999999 999876 55544432          2234567789999999999999 8899999999999


Q ss_pred             hhhcCCCcc
Q 021331          286 LDFGRGTYR  294 (314)
Q Consensus       286 ~~~~~~~~~  294 (314)
                      |+.+++.-.
T Consensus       301 ~~~~~~~~~  309 (321)
T 3vps_A          301 WWQSRDLDD  309 (321)
T ss_dssp             HHHTSCTTC
T ss_pred             HHHhCCCch
Confidence            999876433

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=2.4e-37  Score=269.37  Aligned_cols=276  Identities=20%  Similarity=0.188  Sum_probs=211.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||+++++.|+++|++|++++|+.......+..         ..++.++.+|++|++++.++++..++|+|||+|
T Consensus        27 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~---------~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   97 (333)
T 2q1w_A           27 TGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD---------HPNLTFVEGSIADHALVNQLIGDLQPDAVVHTA   97 (333)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC---------CTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             eCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh---------cCCceEEEEeCCCHHHHHHHHhccCCcEEEECc
Confidence            79999999999999999999999999986542222211         147889999999999999999833499999999


Q ss_pred             CCC-------------cccHHHHHHhCC--CCCcEEEEeeceeec----cCCC------CCccCccccchhhHHHHHHh-
Q 021331           81 GRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYL----KSDL------LPHCESRHKGKLNTESVLES-  134 (314)
Q Consensus        81 ~~~-------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~----~~~~------~~~~e~~~~~k~~~e~~~~~-  134 (314)
                      +..             ..++.++++++.  ++++||++||.++|+    ....      .|....|+.+|..+|.+++. 
T Consensus        98 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s  177 (333)
T 2q1w_A           98 ASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYS  177 (333)
T ss_dssp             CCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHHHH
T ss_pred             eecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHHHHhh
Confidence            863             234678888877  778999999999997    4221      12213689999999999988 


Q ss_pred             cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCccc
Q 021331          135 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV  214 (314)
Q Consensus       135 ~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~  214 (314)
                      .. +++++||+.+|||+....++..++..+..+.  .+++ ++..+++++++|+|++++.++.++.  +++||+++++.+
T Consensus       178 ~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~--g~~~~v~~~~~~  251 (333)
T 2q1w_A          178 GL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVRAVDGVG--HGAYHFSSGTDV  251 (333)
T ss_dssp             TC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHHHHTTCC--CEEEECSCSCCE
T ss_pred             hC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHHhcCC--CCEEEeCCCCCc
Confidence            76 9999999999999844456677777776665  3445 6778999999999999999998765  889999999999


Q ss_pred             cHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHhhhhcCCCcc
Q 021331          215 TFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYR  294 (314)
Q Consensus       215 s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~  294 (314)
                      |+.|+++.+.+.+|.+  .+...+... .     ..........+|++|+++. ||.|+++++++|+++++|+.+.+.++
T Consensus       252 s~~e~~~~i~~~~g~~--~~~~~~~~~-~-----~~~~~~~~~~~d~~k~~~~-G~~p~~~~~~~l~~~~~~~~~~~~~~  322 (333)
T 2q1w_A          252 AIKELYDAVVEAMALP--SYPEPEIRE-L-----GPDDAPSILLDPSRTIQDF-GKIEFTPLKETVAAAVAYFREYGVSG  322 (333)
T ss_dssp             EHHHHHHHHHHHTTCS--SCCCCEEEE-C-----CTTSCCCCCBCCHHHHHHH-CCCCCCCHHHHHHHHHHHHHHHCC--
T ss_pred             cHHHHHHHHHHHhCCC--CceeCCCCC-c-----ccccccccccCCHHHHHhc-CCCcCCCHHHHHHHHHHHHHHHCCCC
Confidence            9999999999999976  222222111 0     0111235677899999998 99999999999999999999888766


Q ss_pred             CCCCCc
Q 021331          295 KEADFS  300 (314)
Q Consensus       295 ~~~~~~  300 (314)
                      .-..+.
T Consensus       323 ~~~~~~  328 (333)
T 2q1w_A          323 GYTHLK  328 (333)
T ss_dssp             ------
T ss_pred             CCceee
Confidence            544443

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=1.5e-37  Score=270.42  Aligned_cols=271  Identities=17%  Similarity=0.169  Sum_probs=215.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|++.|+++|++|++++|+..........         ..++.++.+|++|++++.++++..++|+|||+|
T Consensus        26 TGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   96 (330)
T 2pzm_A           26 TGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPP---------VAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSA   96 (330)
T ss_dssp             ETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCS---------CTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhc---------cCCceEEEeeCCCHHHHHHHHhhcCCCEEEECC
Confidence            79999999999999999999999999976542211110         147889999999999999998766899999999


Q ss_pred             CCC-------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCC--Cc------cCccccchhhHHHHHHhcCC
Q 021331           81 GRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLL--PH------CESRHKGKLNTESVLESKGV  137 (314)
Q Consensus        81 ~~~-------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~--~~------~e~~~~~k~~~e~~~~~~~~  137 (314)
                      +..             ..++.++++++.  ++++||++||.++|+.....  |+      ...|+.+|..+|.+++..++
T Consensus        97 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~~~  176 (330)
T 2pzm_A           97 AAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDV  176 (330)
T ss_dssp             CCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTCSS
T ss_pred             ccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHHHHHHHHcCC
Confidence            863             244678888877  78899999999999765332  21      22699999999999998899


Q ss_pred             ceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHH-HHHHHhcCCccCCceEEecCCccccH
Q 021331          138 NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR-AFVQVLGNEKASRQVFNISGEKYVTF  216 (314)
Q Consensus       138 ~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~-~~~~~l~~~~~~~~~~~i~~~~~~s~  216 (314)
                      +++++||+++|||+....++..++..+..+.  .+++++. .++++|++|+|+ +++.++.++.  +++||+++++++|+
T Consensus       177 ~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~--g~~~~v~~~~~~s~  251 (330)
T 2pzm_A          177 PVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP--TGVFNVSTGEGHSI  251 (330)
T ss_dssp             CEEEEEECEEECTTCCSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTCC--CEEEEESCSCCEEH
T ss_pred             CEEEEeeeeeECcCCCCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcCC--CCEEEeCCCCCCCH
Confidence            9999999999999864456666667666665  4445566 889999999999 9999998754  88999999999999


Q ss_pred             HHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhH-----HhhcCCCcccChHHHHHHHHhhhhcCC
Q 021331          217 DGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKA-----KHVLGWKPEFDLVEGLADSYNLDFGRG  291 (314)
Q Consensus       217 ~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-----~~~lg~~~~~~~~~~l~~~~~~~~~~~  291 (314)
                      .|+++.+.+.+|.+  .+...+..          + ......+|++|+     ++ |||.|+++++++|+++++|+.+.+
T Consensus       252 ~e~~~~i~~~~g~~--~~~~~~~~----------~-~~~~~~~d~~k~~~~~l~~-lG~~p~~~~~~~l~~~~~~~~~~~  317 (330)
T 2pzm_A          252 KEVFDVVLDYVGAT--LAEPVPVV----------A-PGADDVPSVVLDPSKTETE-FGWKAKVDFKDTITGQLAWYDKYG  317 (330)
T ss_dssp             HHHHHHHHHHHTCC--CSSCCCEE----------C-CCTTSCSEECBCCHHHHHH-HCCCCCCCHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCC--CceeCCCC----------c-chhhccCCHHHHhhchHHH-cCCcccCCHHHHHHHHHHHHHhhC
Confidence            99999999999976  22222211          1 224456777787     77 999999999999999999999888


Q ss_pred             CccCCCCC
Q 021331          292 TYRKEADF  299 (314)
Q Consensus       292 ~~~~~~~~  299 (314)
                      ++....+.
T Consensus       318 ~~~~~~~~  325 (330)
T 2pzm_A          318 VTDIFSHL  325 (330)
T ss_dssp             SCSCCCSS
T ss_pred             cccccCcC
Confidence            76654443

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=9.9e-38  Score=272.79  Aligned_cols=272  Identities=17%  Similarity=0.182  Sum_probs=210.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|++.|+++|++|++++|+...... +.          ..+++++.+|++|++++.++++  ++|+|||+|
T Consensus        19 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-l~----------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~a   85 (342)
T 2x4g_A           19 LGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR-LA----------YLEPECRVAEMLDHAGLERALR--GLDGVIFSA   85 (342)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG-GG----------GGCCEEEECCTTCHHHHHHHTT--TCSEEEEC-
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh-hc----------cCCeEEEEecCCCHHHHHHHHc--CCCEEEECC
Confidence            7999999999999999999999999998765321 11          1378899999999999999998  899999999


Q ss_pred             CCC--------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCC-------CCc------cCccccchhhHHHH
Q 021331           81 GRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL-------LPH------CESRHKGKLNTESV  131 (314)
Q Consensus        81 ~~~--------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~-------~~~------~e~~~~~k~~~e~~  131 (314)
                      +..              ..++.+++++|.  ++++|||+||.++|+....       .|.      ...|+.+|..+|.+
T Consensus        86 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~  165 (342)
T 2x4g_A           86 GYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQ  165 (342)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHH
T ss_pred             ccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHH
Confidence            852              335778999887  7889999999999975432       111      22589999999998


Q ss_pred             HHh---cCCceEEEecCeeeCCCC-CCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEE
Q 021331          132 LES---KGVNWTSLRPVYIYGPLN-YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN  207 (314)
Q Consensus       132 ~~~---~~~~~~ilR~~~v~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~  207 (314)
                      ++.   .+++++++||+.+|||+. ... +..++..+..+....+   ++..++++|++|+|++++.+++++.. +++||
T Consensus       166 ~~~~~~~g~~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~~-g~~~~  240 (342)
T 2x4g_A          166 AREQARNGLPVVIGIPGMVLGELDIGPT-TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGRI-GERYL  240 (342)
T ss_dssp             HHHHHHTTCCEEEEEECEEECSCCSSCS-TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSCT-TCEEE
T ss_pred             HHHHhhcCCcEEEEeCCceECCCCcccc-HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCCC-CceEE
Confidence            865   389999999999999975 322 4556666666665544   46778999999999999999987654 88999


Q ss_pred             ecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccc------------cCCC-----CcccCCCcceeecHHhHHhhcCC
Q 021331          208 ISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFD------------FGKK-----KAFPFRDQHFFASVEKAKHVLGW  270 (314)
Q Consensus       208 i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~------------~~~~-----~~~~~~~~~~~~~~~k~~~~lg~  270 (314)
                      +++++ +|+.|+++.+.+.+|.+. .+ ..+.+...            .+..     ...........+|++|++++|||
T Consensus       241 v~~~~-~s~~e~~~~i~~~~g~~~-~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~  317 (342)
T 2x4g_A          241 LTGHN-LEMADLTRRIAELLGQPA-PQ-PMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGF  317 (342)
T ss_dssp             ECCEE-EEHHHHHHHHHHHHTCCC-CE-EECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHHHHHHCC
T ss_pred             EcCCc-ccHHHHHHHHHHHhCCCC-CC-cCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHHHhCCC
Confidence            99999 999999999999999876 43 44443211            0100     00111235677899999999999


Q ss_pred             -CcccChHHHHHHHHhhhhcCCCcc
Q 021331          271 -KPEFDLVEGLADSYNLDFGRGTYR  294 (314)
Q Consensus       271 -~~~~~~~~~l~~~~~~~~~~~~~~  294 (314)
                       .| ++++++++++++|++++++++
T Consensus       318 ~~p-~~~~~~l~~~~~~~~~~g~~~  341 (342)
T 2x4g_A          318 FST-TALDDTLLRAIDWFRDNGYFN  341 (342)
T ss_dssp             CCC-SCHHHHHHHHHHHHHHTTCCC
T ss_pred             CCC-CCHHHHHHHHHHHHHHcCCCC
Confidence             99 799999999999999888653

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=8.2e-37  Score=272.30  Aligned_cols=279  Identities=21%  Similarity=0.309  Sum_probs=209.6

Q ss_pred             CCcccccHHHHHHHHH-HCCCeEEEEEcCCcccccCCCCCCchhh----hhc-----cCc---eEEEEecCCChhhHHHh
Q 021331            1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKAPIAQQLPGESDQEF----AEF-----SSK---ILHLKGDRKDYDFVKSS   67 (314)
Q Consensus         1 tGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~----~~~-----~~~---~~~~~~D~~d~~~l~~~   67 (314)
                      ||||||||++|++.|+ ++|++|++++|+.......-.......+    +..     ..+   +.++.+|++|++++.++
T Consensus         8 TGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   87 (397)
T 1gy8_A            8 CGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGV   87 (397)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHHHHHHH
Confidence            7999999999999999 9999999999876441000000000001    000     124   88999999999999999


Q ss_pred             hhcCC-ccEEEEcCCCC----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCC-------CCCccC--
Q 021331           68 LSAKG-FDVVYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD-------LLPHCE--  119 (314)
Q Consensus        68 ~~~~~-~d~vi~~a~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~-------~~~~~e--  119 (314)
                      ++..+ +|+|||+|+..                +.++.+++++|.  ++++|||+||.++|+...       ..++.|  
T Consensus        88 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~  167 (397)
T 1gy8_A           88 FTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINA  167 (397)
T ss_dssp             HHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTTS
T ss_pred             HHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccccCcCccC
Confidence            97666 99999999863                235678888886  778999999999997654       233332  


Q ss_pred             ------ccccchhhHHHHHHh----cCCceEEEecCeeeCCCC----------CCchhHHHH----HHHHcCC-------
Q 021331          120 ------SRHKGKLNTESVLES----KGVNWTSLRPVYIYGPLN----------YNPVEEWFF----HRLKAGR-------  168 (314)
Q Consensus       120 ------~~~~~k~~~e~~~~~----~~~~~~ilR~~~v~g~~~----------~~~~~~~~~----~~~~~~~-------  168 (314)
                            .|+.+|..+|.+++.    ++++++++||+.||||+.          ...++..++    ..+..+.       
T Consensus       168 ~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
T 1gy8_A          168 KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHED  247 (397)
T ss_dssp             CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--------
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccc
Confidence                  689999999998754    489999999999999963          133445444    1333332       


Q ss_pred             -----CeecCC------CCCceeeeeeHHHHHHHHHHHhcCCccC-----C---ceEEecCCccccHHHHHHHHHHHhCC
Q 021331          169 -----PIPIPG------SGIQVTQLGHVKDLARAFVQVLGNEKAS-----R---QVFNISGEKYVTFDGLARACAKAAGF  229 (314)
Q Consensus       169 -----~~~~~~------~~~~~~~~i~~~D~a~~~~~~l~~~~~~-----~---~~~~i~~~~~~s~~el~~~i~~~~g~  229 (314)
                           ++.+++      ++++.++++|++|+|++++.++.++...     +   ++||+++++++|+.|+++.+.+.+|.
T Consensus       248 ~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~  327 (397)
T 1gy8_A          248 ASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGH  327 (397)
T ss_dssp             ---CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCC
T ss_pred             cccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHHHHHHHHhCC
Confidence                 455655      6778899999999999999999764322     3   79999999999999999999999997


Q ss_pred             CCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCccc-ChHHHHHHHHhhhhcC
Q 021331          230 PEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF-DLVEGLADSYNLDFGR  290 (314)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~-~~~~~l~~~~~~~~~~  290 (314)
                      +. .+...+..          +.......+|++|++++|||.|++ +++++|+++++|+.++
T Consensus       328 ~~-~~~~~~~~----------~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~  378 (397)
T 1gy8_A          328 PI-PVRECGRR----------EGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH  378 (397)
T ss_dssp             CC-CEEEECCC----------TTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred             CC-CeeeCCCC----------CCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhc
Confidence            65 33333211          112346778999999999999999 9999999999999875

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=1e-37  Score=266.17  Aligned_cols=250  Identities=14%  Similarity=0.112  Sum_probs=208.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||+++++.|+++|++|++++|.                          .+|+.|++.+.++++..++|+|||+|
T Consensus        11 tGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------~~D~~d~~~~~~~~~~~~~d~vi~~a   64 (287)
T 3sc6_A           11 TGANGQLGKQLQEELNPEEYDIYPFDKK--------------------------LLDITNISQVQQVVQEIRPHIIIHCA   64 (287)
T ss_dssp             ESTTSHHHHHHHHHSCTTTEEEEEECTT--------------------------TSCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEeccc--------------------------ccCCCCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999999999999982                          25899999999999866799999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHHh
Q 021331           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLES  134 (314)
Q Consensus        81 ~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~~  134 (314)
                      +..                ..++.+++++|.  ++ +|||+||.++|+.....|+.|        .|+.+|..+|++++.
T Consensus        65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  143 (287)
T 3sc6_A           65 AYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKE  143 (287)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            863                234678899887  55 799999999998765545444        699999999999999


Q ss_pred             cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCccc
Q 021331          135 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV  214 (314)
Q Consensus       135 ~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~  214 (314)
                      ++.+++++||+.+|||+. ..++..++..+..+.++.+++  ++.++++|++|+|++++.++.++.  +++||+++++.+
T Consensus       144 ~~~~~~ilR~~~v~G~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~  218 (287)
T 3sc6_A          144 LHNKYFIVRTSWLYGKYG-NNFVKTMIRLGKEREEISVVA--DQIGSPTYVADLNVMINKLIHTSL--YGTYHVSNTGSC  218 (287)
T ss_dssp             HCSSEEEEEECSEECSSS-CCHHHHHHHHHTTCSEEEEEC--SCEECCEEHHHHHHHHHHHHTSCC--CEEEECCCBSCE
T ss_pred             hCCCcEEEeeeeecCCCC-CcHHHHHHHHHHcCCCeEeec--CcccCceEHHHHHHHHHHHHhCCC--CCeEEEcCCCcc
Confidence            888999999999999964 346777777777788777755  478999999999999999999876  779999999999


Q ss_pred             cHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHhhhhc
Q 021331          215 TFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFG  289 (314)
Q Consensus       215 s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~~~~  289 (314)
                      |+.|+++.+.+.+|.+. .+...+...+..     .........+|++|++ .|||.|+++++++|+++++|+..
T Consensus       219 s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~-----~~~~~~~~~~d~~k~~-~lg~~p~~~~~~~l~~~~~~~~~  286 (287)
T 3sc6_A          219 SWFEFAKKIFSYANMKV-NVLPVSTEEFGA-----AAARPKYSIFQHNMLR-LNGFLQMPSWEEGLERFFIETKS  286 (287)
T ss_dssp             EHHHHHHHHHHHHTCCC-EEEEECHHHHCC-----SSCCCSBCCBCCHHHH-HTTCCCCCBHHHHHHHHHHHTC-
T ss_pred             cHHHHHHHHHHHcCCCc-ceeeeehhhcCc-----ccCCCCcccccHHHHH-hhCCCCCccHHHHHHHHHHHHhc
Confidence            99999999999999875 666555432211     1123355678999999 89999999999999999998754

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=7.3e-37  Score=267.76  Aligned_cols=274  Identities=19%  Similarity=0.312  Sum_probs=210.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccc-cCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      ||||||||++|++.|+++|++|++++|...... ...     ..+.. ..++.++.+|++|++++.++++..++|+|||+
T Consensus         7 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (347)
T 1orr_A            7 TGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNL-----HWLSS-LGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL   80 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHH-----HHHHT-TCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             eCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhh-----hhhcc-CCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence            799999999999999999999999998542110 000     00110 13588999999999999999983349999999


Q ss_pred             CCCC----------------cccHHHHHHhCC--CCC-cEEEEeeceeeccCCCCC----------------------c-
Q 021331           80 NGRE----------------ADEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLP----------------------H-  117 (314)
Q Consensus        80 a~~~----------------~~~~~~~~~~~~--~~~-~~i~~Ss~~v~~~~~~~~----------------------~-  117 (314)
                      |+..                ..++.+++++|.  +++ +|||+||.++|+.....|                      . 
T Consensus        81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~  160 (347)
T 1orr_A           81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD  160 (347)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred             CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCC
Confidence            9863                234678888887  554 899999999998533211                      1 


Q ss_pred             -cCccccchhhHHHHHHh----cCCceEEEecCeeeCCCCCC----chhHHHHHHHHcCC-----CeecCCCCCceeeee
Q 021331          118 -CESRHKGKLNTESVLES----KGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGR-----PIPIPGSGIQVTQLG  183 (314)
Q Consensus       118 -~e~~~~~k~~~e~~~~~----~~~~~~ilR~~~v~g~~~~~----~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i  183 (314)
                       ...|+.+|..+|.+++.    ++++++++||+.||||+...    .++..++..+..+.     ++.+++++++.++++
T Consensus       161 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  240 (347)
T 1orr_A          161 FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVL  240 (347)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECE
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeE
Confidence             11699999999998864    48999999999999997532    24555666555444     666678889999999


Q ss_pred             eHHHHHHHHHHHhcC-CccCCceEEecCCc--cccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeec
Q 021331          184 HVKDLARAFVQVLGN-EKASRQVFNISGEK--YVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFAS  260 (314)
Q Consensus       184 ~~~D~a~~~~~~l~~-~~~~~~~~~i~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (314)
                      |++|+|++++.++.+ +...|++||++++.  ++|+.|+++.+.+.+|.+. .+...+.          .+.......+|
T Consensus       241 ~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~----------~~~~~~~~~~d  309 (347)
T 1orr_A          241 HAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDM-RFTNLPV----------RESDQRVFVAD  309 (347)
T ss_dssp             EHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCC-CEEEECC----------CSSCCSEECBC
T ss_pred             EHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCC-CceeCCC----------CCCCcceeecC
Confidence            999999999999986 23467899999987  4999999999999999765 4443331          11223456789


Q ss_pred             HHhHHhhcCCCcccChHHHHHHHHhhhhcCC
Q 021331          261 VEKAKHVLGWKPEFDLVEGLADSYNLDFGRG  291 (314)
Q Consensus       261 ~~k~~~~lg~~~~~~~~~~l~~~~~~~~~~~  291 (314)
                      ++|++++|||.|+++++++|+++++|++...
T Consensus       310 ~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~  340 (347)
T 1orr_A          310 IKKITNAIDWSPKVSAKDGVQKMYDWTSSIL  340 (347)
T ss_dssp             CHHHHHHHCCCCCSCHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHCCCccCCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999988754

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=5.3e-37  Score=265.89  Aligned_cols=254  Identities=22%  Similarity=0.324  Sum_probs=205.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|++.|+++|++|++++|+.                         .+|+.|++++.++++..++|+|||+|
T Consensus         9 tGatG~iG~~l~~~L~~~g~~v~~~~r~~-------------------------~~D~~d~~~~~~~~~~~~~d~vih~a   63 (321)
T 1e6u_A            9 AGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------ELNLLDSRAVHDFFASERIDQVYLAA   63 (321)
T ss_dssp             ETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCeEEEEecCc-------------------------cCCccCHHHHHHHHHhcCCCEEEEcC
Confidence            79999999999999999999999987652                         15899999999998766899999999


Q ss_pred             CCCc-----------------ccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCcc-------------CccccchhhH
Q 021331           81 GREA-----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHC-------------ESRHKGKLNT  128 (314)
Q Consensus        81 ~~~~-----------------~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~-------------e~~~~~k~~~  128 (314)
                      +...                 .++.+++++|.  ++++|||+||.++|+.....++.             ..|+.+|..+
T Consensus        64 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  143 (321)
T 1e6u_A           64 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAG  143 (321)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHH
T ss_pred             eecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHH
Confidence            8642                 34678888887  77899999999999754322211             2688999999


Q ss_pred             HHHHHh----cCCceEEEecCeeeCCCCC-----CchhHHHHHHHHc----C-CCeecCCCCCceeeeeeHHHHHHHHHH
Q 021331          129 ESVLES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKA----G-RPIPIPGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       129 e~~~~~----~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                      |++++.    ++++++++||+.+|||+..     ..++..++..+..    + .++.+++++++.++++|++|+|++++.
T Consensus       144 E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~  223 (321)
T 1e6u_A          144 IKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIH  223 (321)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHH
Confidence            998865    5899999999999999754     2466666666653    3 566667888899999999999999999


Q ss_pred             HhcCCccC--------CceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHh
Q 021331          195 VLGNEKAS--------RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKH  266 (314)
Q Consensus       195 ~l~~~~~~--------~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  266 (314)
                      ++.++...        +++||+++++++|+.|+++.+.+.+|.+. .+...+..          +.......+|++|+++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~----------~~~~~~~~~d~~k~~~  292 (321)
T 1e6u_A          224 VMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKG-RVVFDASK----------PDGTPRKLLDVTRLHQ  292 (321)
T ss_dssp             HHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCS-EEEEETTS----------CCCCSBCCBCCHHHHH
T ss_pred             HHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCC-ceEeCCCC----------CCCcccccCCHHHHHh
Confidence            99876532        58999999999999999999999999865 44433321          1123456789999999


Q ss_pred             hcCCCcccChHHHHHHHHhhhhcCC
Q 021331          267 VLGWKPEFDLVEGLADSYNLDFGRG  291 (314)
Q Consensus       267 ~lg~~~~~~~~~~l~~~~~~~~~~~  291 (314)
                       |||.|+++++++|+++++|++++.
T Consensus       293 -lG~~p~~~~~~~l~~~~~~~~~~~  316 (321)
T 1e6u_A          293 -LGWYHEISLEAGLASTYQWFLENQ  316 (321)
T ss_dssp             -TTCCCCCCHHHHHHHHHHHHHHTC
T ss_pred             -cCCccCCcHHHHHHHHHHHHHHHH
Confidence             999999999999999999987643

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=1.8e-36  Score=264.38  Aligned_cols=274  Identities=22%  Similarity=0.290  Sum_probs=204.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      ||||||||+++++.|+++|++|++++|.........     ..+... ..++.++.+|++|++++.++++..++|+|||+
T Consensus         6 TGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            6 TGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVL-----PVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHH-----HHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHH-----HHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            799999999999999999999999987543211000     011111 24678899999999999999975579999999


Q ss_pred             CCCC----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCC------Cc---cCccccchhhHHHHH
Q 021331           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLL------PH---CESRHKGKLNTESVL  132 (314)
Q Consensus        80 a~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~------~~---~e~~~~~k~~~e~~~  132 (314)
                      |+..                ..++.+++++|.  ++++||++||.++|+.....      +.   ...|+.+|..+|.++
T Consensus        81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~  160 (338)
T 1udb_A           81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHH
Confidence            9863                234677888876  77899999999999754321      11   226999999999987


Q ss_pred             Hh----c-CCceEEEecCeeeCCCC-----------CCchhHHHHHHHH-cCCCeecCC------CCCceeeeeeHHHHH
Q 021331          133 ES----K-GVNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLK-AGRPIPIPG------SGIQVTQLGHVKDLA  189 (314)
Q Consensus       133 ~~----~-~~~~~ilR~~~v~g~~~-----------~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i~~~D~a  189 (314)
                      +.    . +++++++||+++|||+.           ...+...+..... .+..+.+++      ++.+.++++|++|+|
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva  240 (338)
T 1udb_A          161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA  240 (338)
T ss_dssp             HHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHH
T ss_pred             HHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHH
Confidence            54    3 79999999999999842           1234455544444 334444433      457789999999999


Q ss_pred             HHHHHHhcCC--ccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhh
Q 021331          190 RAFVQVLGNE--KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHV  267 (314)
Q Consensus       190 ~~~~~~l~~~--~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  267 (314)
                      ++++.+++++  ...+++||+++++++|+.|+++.+.+.+|.+. .+...+..          +.......+|++|++++
T Consensus       241 ~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~----------~~~~~~~~~d~~k~~~~  309 (338)
T 1udb_A          241 DGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPV-NYHFAPRR----------EGDLPAYWADASKADRE  309 (338)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCC-CEEEECCC----------TTCCSBCCBCCHHHHHH
T ss_pred             HHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCC-cceeCCCC----------CCchhhhhcCHHHHHHH
Confidence            9999988753  22237999999999999999999999999765 33222211          11223566899999999


Q ss_pred             cCCCcccChHHHHHHHHhhhhcC
Q 021331          268 LGWKPEFDLVEGLADSYNLDFGR  290 (314)
Q Consensus       268 lg~~~~~~~~~~l~~~~~~~~~~  290 (314)
                      |||.|+++++++++++++|++.+
T Consensus       310 lG~~p~~~l~~~l~~~~~w~~~~  332 (338)
T 1udb_A          310 LNWRVTRTLDEMAQDTWHWQSRH  332 (338)
T ss_dssp             HCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             cCCCcCCCHHHHHHHHHHHHHhc
Confidence            99999999999999999998764

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=2.1e-36  Score=266.32  Aligned_cols=280  Identities=19%  Similarity=0.254  Sum_probs=214.4

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEEEcCCcc-cccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      ||||||||++|++.|++. |++|++++|+... ....+..     +.. ..++.++.+|++|++++.++++..++|+|||
T Consensus         6 TGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~-----~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (361)
T 1kew_A            6 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSD-----ISE-SNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             ESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTT-----TTT-CTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhh-----hhc-CCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence            799999999999999998 7999999987521 1111110     000 2578999999999999999987568999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC----CCC-------cEEEEeeceeeccCCC--C--------Ccc---
Q 021331           79 INGRE----------------ADEVEPILDALP----NLE-------QFIYCSSAGVYLKSDL--L--------PHC---  118 (314)
Q Consensus        79 ~a~~~----------------~~~~~~~~~~~~----~~~-------~~i~~Ss~~v~~~~~~--~--------~~~---  118 (314)
                      +|+..                ..++.+++++|.    +++       +||++||.++|+....  .        ++.   
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~  159 (361)
T 1kew_A           80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT  159 (361)
T ss_dssp             CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred             CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCC
Confidence            99863                234677888876    455       9999999999975421  0        111   


Q ss_pred             -----CccccchhhHHHHHHh----cCCceEEEecCeeeCCCCC-CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHH
Q 021331          119 -----ESRHKGKLNTESVLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  188 (314)
Q Consensus       119 -----e~~~~~k~~~e~~~~~----~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  188 (314)
                           ..|+.+|..+|.+++.    ++++++++||+.||||+.. ..++..++..+..+.++.+++++.+.++++|++|+
T Consensus       160 ~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  239 (361)
T 1kew_A          160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (361)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHH
Confidence                 2699999999998854    4899999999999999754 34566677777788888777888889999999999


Q ss_pred             HHHHHHHhcCCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhc
Q 021331          189 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVL  268 (314)
Q Consensus       189 a~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l  268 (314)
                      |++++.+++++. .+++||+++++++|+.|+++.+.+.+|.+.+...+.. ....+.  ...+.....+.+|++|++++|
T Consensus       240 a~a~~~~~~~~~-~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~-~~~~~~--~~~~~~~~~~~~d~~k~~~~l  315 (361)
T 1kew_A          240 ARALHMVVTEGK-AGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYR-EQITYV--ADRPGHDRRYAIDAGKISREL  315 (361)
T ss_dssp             HHHHHHHHHHCC-TTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGG-GGEEEE--CCCTTCCCBCCBCCHHHHHHH
T ss_pred             HHHHHHHHhCCC-CCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccc-cceeec--CCCCcccceeecCHHHHHHHh
Confidence            999999997653 5789999999999999999999999986542221100 000000  011222245678999999999


Q ss_pred             CCCcccChHHHHHHHHhhhhcC
Q 021331          269 GWKPEFDLVEGLADSYNLDFGR  290 (314)
Q Consensus       269 g~~~~~~~~~~l~~~~~~~~~~  290 (314)
                      ||.|+++++++|+++++|++++
T Consensus       316 G~~p~~~~~e~l~~~~~~~~~~  337 (361)
T 1kew_A          316 GWKPLETFESGIRKTVEWYLAN  337 (361)
T ss_dssp             CCCCSCCHHHHHHHHHHHHHHC
T ss_pred             CCCCccCHHHHHHHHHHHHHhc
Confidence            9999999999999999999875

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=2.4e-36  Score=269.89  Aligned_cols=278  Identities=18%  Similarity=0.215  Sum_probs=210.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCccccc------CCCC--CCchhhh----hccCceEEEEecCCChhhHHHhh
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ------QLPG--ESDQEFA----EFSSKILHLKGDRKDYDFVKSSL   68 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~--~~~~~~~----~~~~~~~~~~~D~~d~~~l~~~~   68 (314)
                      ||||||||++|++.|+++|++|++++|.......      .+..  .....+.    ....++.++.+|++|++++.+++
T Consensus        17 TG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~   96 (404)
T 1i24_A           17 IGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESF   96 (404)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHHHHHHHH
Confidence            7999999999999999999999999986432100      0000  0000000    01257889999999999999999


Q ss_pred             hcCCccEEEEcCCCC-------------------cccHHHHHHhCC--CC-CcEEEEeeceeeccCCC------------
Q 021331           69 SAKGFDVVYDINGRE-------------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDL------------  114 (314)
Q Consensus        69 ~~~~~d~vi~~a~~~-------------------~~~~~~~~~~~~--~~-~~~i~~Ss~~v~~~~~~------------  114 (314)
                      +..++|+|||+|+..                   +.++.+++++|.  +. ++||++||.++|+....            
T Consensus        97 ~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~E~~~~~~~~  176 (404)
T 1i24_A           97 KSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHN  176 (404)
T ss_dssp             HHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSEEEEEET
T ss_pred             hccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCCCCCCccccccccc
Confidence            844499999999852                   234677888877  55 59999999999975421            


Q ss_pred             -------CCc--cCccccchhhHHHHHHh----cCCceEEEecCeeeCCCCC------------------CchhHHHHHH
Q 021331          115 -------LPH--CESRHKGKLNTESVLES----KGVNWTSLRPVYIYGPLNY------------------NPVEEWFFHR  163 (314)
Q Consensus       115 -------~~~--~e~~~~~k~~~e~~~~~----~~~~~~ilR~~~v~g~~~~------------------~~~~~~~~~~  163 (314)
                             .+.  ...|+.+|..+|.+++.    ++++++++||+.||||+..                  ..++..++..
T Consensus       177 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (404)
T 1i24_A          177 GRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQ  256 (404)
T ss_dssp             TEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHH
T ss_pred             cccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHHH
Confidence                   011  12589999999998753    4899999999999999753                  2467778888


Q ss_pred             HHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCC--ceEEecCCccccHHHHHHHHHHH---hCCCCCeeeecC
Q 021331          164 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR--QVFNISGEKYVTFDGLARACAKA---AGFPEPELVHYN  238 (314)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~--~~~~i~~~~~~s~~el~~~i~~~---~g~~~~~~~~~~  238 (314)
                      +..+.++.+++++++.++++|++|+|++++.++.++...+  ++||+++ +++|+.|+++.+.+.   +|.+. .+...|
T Consensus       257 ~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~~~~g~~~-~~~~~p  334 (404)
T 1i24_A          257 AAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAGSKLGLDV-KKMTVP  334 (404)
T ss_dssp             HHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHHHTTTCCC-CEEEEC
T ss_pred             HHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHHHhhCCCc-cccccC
Confidence            8888888777888899999999999999999998765445  6999998 889999999999998   77665 333333


Q ss_pred             CcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHhhhhc
Q 021331          239 PKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFG  289 (314)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~~~~  289 (314)
                      ....        ......+.+|++|++ +|||.|+++++++++++++|+..
T Consensus       335 ~~~~--------~~~~~~~~~d~~k~~-~LG~~p~~~~~~~l~~~~~~~~~  376 (404)
T 1i24_A          335 NPRV--------EAEEHYYNAKHTKLM-ELGLEPHYLSDSLLDSLLNFAVQ  376 (404)
T ss_dssp             CSSC--------SCSSCCCCBCCCHHH-HTTCCCCCCCHHHHHHHHHHHHH
T ss_pred             cccC--------ccccceEecCHHHHH-HcCCCcCcCHHHHHHHHHHHHHh
Confidence            3211        012234567999997 69999999999999999998764

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=9.9e-37  Score=260.71  Aligned_cols=249  Identities=16%  Similarity=0.126  Sum_probs=204.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|++.|+++|++|++++|+                          .+|++|++++.++++..++|+|||+|
T Consensus        18 tGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------~~Dl~d~~~~~~~~~~~~~d~vih~A   71 (292)
T 1vl0_A           18 TGANGQLGREIQKQLKGKNVEVIPTDVQ--------------------------DLDITNVLAVNKFFNEKKPNVVINCA   71 (292)
T ss_dssp             ESTTSHHHHHHHHHHTTSSEEEEEECTT--------------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCChHHHHHHHHHHhCCCeEEeccCc--------------------------cCCCCCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999999999999986                          15899999999999755799999999


Q ss_pred             CCCc----------------ccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHHh
Q 021331           81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLES  134 (314)
Q Consensus        81 ~~~~----------------~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~~  134 (314)
                      +...                .++.+++++|.  ++ +|||+||.++|+.....++.|        .|+.+|..+|.+++.
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~  150 (292)
T 1vl0_A           72 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKA  150 (292)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHh
Confidence            8632                34678888887  66 999999999998654333332        699999999999998


Q ss_pred             cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCccc
Q 021331          135 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV  214 (314)
Q Consensus       135 ~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~  214 (314)
                      .+.+++++||+.|||| . ..++..++..+..+.++.+++  ++.++++|++|+|++++.++.++  .+++||+++++++
T Consensus       151 ~~~~~~~lR~~~v~G~-~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~--~~~~~~i~~~~~~  224 (292)
T 1vl0_A          151 LNPKYYIVRTAWLYGD-G-NNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK--NYGTFHCTCKGIC  224 (292)
T ss_dssp             HCSSEEEEEECSEESS-S-SCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT--CCEEEECCCBSCE
T ss_pred             hCCCeEEEeeeeeeCC-C-cChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC--CCcEEEecCCCCc
Confidence            8889999999999999 3 456667777777777666654  47789999999999999999876  5789999999999


Q ss_pred             cHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHhhhhc
Q 021331          215 TFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFG  289 (314)
Q Consensus       215 s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~~~~  289 (314)
                      |+.|+++.+.+.+|.+. .+...+...+..     .........+|++|++++|||.|+ +++++|+++++|+++
T Consensus       225 s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~-----~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~~  292 (292)
T 1vl0_A          225 SWYDFAVEIFRLTGIDV-KVTPCTTEEFPR-----PAKRPKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQM  292 (292)
T ss_dssp             EHHHHHHHHHHHHCCCC-EEEEECSTTSCC-----SSCCCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHTC
T ss_pred             cHHHHHHHHHHHhCCCC-ceeeccccccCc-----ccCCCccccccHHHHHHHcCCCCC-CHHHHHHHHHHHhcC
Confidence            99999999999999875 555554433211     111234677899999999999999 999999999999753

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=5.2e-36  Score=262.01  Aligned_cols=263  Identities=21%  Similarity=0.295  Sum_probs=207.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|++.|+++|++|++++|+.......+.     .+. ...++.++.+|+.++.     +.  ++|+|||+|
T Consensus        33 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~D~~~~~-----~~--~~d~vih~A   99 (343)
T 2b69_A           33 TGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE-----HWI-GHENFELINHDVVEPL-----YI--EVDQIYHLA   99 (343)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG-----GGT-TCTTEEEEECCTTSCC-----CC--CCSEEEECC
T ss_pred             EcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhh-----hhc-cCCceEEEeCccCChh-----hc--CCCEEEECc
Confidence            7999999999999999999999999997543221111     000 0257899999998753     44  899999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC-------------ccccchhhHH
Q 021331           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE-------------SRHKGKLNTE  129 (314)
Q Consensus        81 ~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e-------------~~~~~k~~~e  129 (314)
                      +..                ..++.+++++|.  ++ +|||+||.++|+.....+..|             .|+.+|..+|
T Consensus       100 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E  178 (343)
T 2b69_A          100 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAE  178 (343)
T ss_dssp             SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHH
T ss_pred             cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHH
Confidence            863                234678888887  54 999999999998643322222             4899999999


Q ss_pred             HHHH----hcCCceEEEecCeeeCCCCC---CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccC
Q 021331          130 SVLE----SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  202 (314)
Q Consensus       130 ~~~~----~~~~~~~ilR~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~  202 (314)
                      .+++    +++++++++||+.+|||+..   ..++..++..+..++++.+++++++.++++|++|+|++++.++..+.  
T Consensus       179 ~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~--  256 (343)
T 2b69_A          179 TMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV--  256 (343)
T ss_dssp             HHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC--
T ss_pred             HHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCC--
Confidence            9874    45899999999999999753   34666777777888888777888899999999999999999998653  


Q ss_pred             CceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHH
Q 021331          203 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLAD  282 (314)
Q Consensus       203 ~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~  282 (314)
                      +++||+++++++|+.|+++.+.+.+|.+. .+...+...          ........|++|++++|||.|+++++++|++
T Consensus       257 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~-~~~~~p~~~----------~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~  325 (343)
T 2b69_A          257 SSPVNLGNPEEHTILEFAQLIKNLVGSGS-EIQFLSEAQ----------DDPQKRKPDIKKAKLMLGWEPVVPLEEGLNK  325 (343)
T ss_dssp             CSCEEESCCCEEEHHHHHHHHHHHHTCCC-CEEEECCCT----------TCCCCCCBCCHHHHHHHCCCCCSCHHHHHHH
T ss_pred             CCeEEecCCCCCcHHHHHHHHHHHhCCCC-CceeCCCCC----------CCCceecCCHHHHHHHcCCCCCCCHHHHHHH
Confidence            67999999999999999999999999875 444443221          1123456799999999999999999999999


Q ss_pred             HHhhhhcC
Q 021331          283 SYNLDFGR  290 (314)
Q Consensus       283 ~~~~~~~~  290 (314)
                      +++|+.+.
T Consensus       326 ~~~~~~~~  333 (343)
T 2b69_A          326 AIHYFRKE  333 (343)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998753

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=3.6e-37  Score=264.32  Aligned_cols=258  Identities=16%  Similarity=0.105  Sum_probs=207.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||+|+++++.|+ +|++|++++|+...                      +.+|+.|++++.++++..++|+|||+|
T Consensus         6 tGatG~iG~~l~~~L~-~g~~V~~~~r~~~~----------------------~~~D~~d~~~~~~~~~~~~~d~vih~a   62 (299)
T 1n2s_A            6 FGKTGQVGWELQRSLA-PVGNLIALDVHSKE----------------------FCGDFSNPKGVAETVRKLRPDVIVNAA   62 (299)
T ss_dssp             ECTTSHHHHHHHHHTT-TTSEEEEECTTCSS----------------------SCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHhh-cCCeEEEecccccc----------------------ccccCCCHHHHHHHHHhcCCCEEEECc
Confidence            7999999999999999 89999999987521                      357999999999999844599999999


Q ss_pred             CCC----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHHh
Q 021331           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLES  134 (314)
Q Consensus        81 ~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~~  134 (314)
                      +..                ..++.+++++|.  ++ +|||+||.++|+.....++.|        .|+.+|..+|++++.
T Consensus        63 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  141 (299)
T 1n2s_A           63 AHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQD  141 (299)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             ccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence            863                234788999987  44 899999999998654433333        689999999999998


Q ss_pred             cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--c-CCceEEecCC
Q 021331          135 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--A-SRQVFNISGE  211 (314)
Q Consensus       135 ~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~-~~~~~~i~~~  211 (314)
                      ...+++++||+.+|||+.. .++..++..+..+.++.+++  ++.++++|++|+|++++.+++++.  . .+++||++++
T Consensus       142 ~~~~~~ilRp~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~  218 (299)
T 1n2s_A          142 NCPKHLIFRTSWVYAGKGN-NFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAG  218 (299)
T ss_dssp             HCSSEEEEEECSEECSSSC-CHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCB
T ss_pred             hCCCeEEEeeeeecCCCcC-cHHHHHHHHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCC
Confidence            8889999999999999754 46677777777777776654  478999999999999999998752  2 3789999999


Q ss_pred             ccccHHHHHHHHHHHhCCCC-----CeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHhh
Q 021331          212 KYVTFDGLARACAKAAGFPE-----PELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNL  286 (314)
Q Consensus       212 ~~~s~~el~~~i~~~~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~  286 (314)
                      +++|+.|+++.+.+.+|.+.     +.+...+...+  .   ..........+|++|++++|||.|+ +++++|+++++|
T Consensus       219 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~  292 (299)
T 1n2s_A          219 GTTTWHDYAALVFDEARKAGITLALTELNAVPTSAY--P---TPASRPGNSRLNTEKFQRNFDLILP-QWELGVKRMLTE  292 (299)
T ss_dssp             SCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTS--C---CSSCCCSBCCBCCHHHHHHHTCCCC-BHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhCCCccccccccccccccccc--c---CcCCCCCceeeeHHHHHHhcCCCCC-CHHHHHHHHHHH
Confidence            99999999999999998753     23433332211  0   0112235678899999999999998 899999999999


Q ss_pred             hhcCC
Q 021331          287 DFGRG  291 (314)
Q Consensus       287 ~~~~~  291 (314)
                      +++..
T Consensus       293 ~~~~~  297 (299)
T 1n2s_A          293 MFTTT  297 (299)
T ss_dssp             HHSCC
T ss_pred             HHhcC
Confidence            88754

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-37  Score=265.93  Aligned_cols=266  Identities=16%  Similarity=0.180  Sum_probs=188.8

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC---CccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~---~~d~v   76 (314)
                      ||||||||++|+++|+++| ++|++++|+.....  .     ..+    .++. +.+|++|++.+..+++..   ++|+|
T Consensus         5 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~-----~~~----~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~v   72 (310)
T 1eq2_A            5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--F-----VNL----VDLN-IADYMDKEDFLIQIMAGEEFGDVEAI   72 (310)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--G-----HHH----HTSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred             EcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--h-----hhc----Ccce-eccccccHHHHHHHHhccccCCCcEE
Confidence            7999999999999999999 99999999865421  0     001    1233 678999999999988721   49999


Q ss_pred             EEcCCCC--------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHH
Q 021331           77 YDINGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVL  132 (314)
Q Consensus        77 i~~a~~~--------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~  132 (314)
                      ||+|+..              ..++.+++++|.  ++ +||++||.++|+.....+..|        .|+.+|..+|.++
T Consensus        73 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~  151 (310)
T 1eq2_A           73 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYV  151 (310)
T ss_dssp             EECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHH
T ss_pred             EECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            9999863              234778999887  77 999999999998655433333        5899999999988


Q ss_pred             Hh----cCCceEEEecCeeeCCCCC-----CchhHHHHHHHHcCCCeecCCCCCc-eeeeeeHHHHHHHHHHHhcCCccC
Q 021331          133 ES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQ-VTQLGHVKDLARAFVQVLGNEKAS  202 (314)
Q Consensus       133 ~~----~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~D~a~~~~~~l~~~~~~  202 (314)
                      +.    ++++++++||+.+|||+..     ..++..++..+..+.++.+++++++ .++++|++|+|++++.++.++.  
T Consensus       152 ~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~--  229 (310)
T 1eq2_A          152 RQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--  229 (310)
T ss_dssp             HHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--
T ss_pred             HHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC--
Confidence            54    4799999999999999753     3466777888888887777778888 8999999999999999998765  


Q ss_pred             CceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCC-CcccChHHHHH
Q 021331          203 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGW-KPEFDLVEGLA  281 (314)
Q Consensus       203 ~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~-~~~~~~~~~l~  281 (314)
                      +++||+++++++|+.|+++.+.+.+|.+.....+.+...        ..........|++|+++ ||| .|.++++++|+
T Consensus       230 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-lG~~~~~~~l~~~l~  300 (310)
T 1eq2_A          230 SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKL--------KGRYQAFTQADLTNLRA-AGYDKPFKTVAEGVT  300 (310)
T ss_dssp             CEEEEESCSCCBCHHHHHHHC-----------------------------CCCSCCBCCHHHHH-TTCCCCCCCHHHHHH
T ss_pred             CCeEEEeCCCccCHHHHHHHHHHHcCCCCceeCCCChhh--------hcccccccccchHHHHh-cCCCCCCCCHHHHHH
Confidence            789999999999999999999999997611222222210        01112345678899976 999 78889999999


Q ss_pred             HHHhhhhcC
Q 021331          282 DSYNLDFGR  290 (314)
Q Consensus       282 ~~~~~~~~~  290 (314)
                      ++++|++++
T Consensus       301 ~~~~~~~~~  309 (310)
T 1eq2_A          301 EYMAWLNRD  309 (310)
T ss_dssp             HHHHHTC--
T ss_pred             HHHHHHHhc
Confidence            999998653

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.1e-36  Score=265.80  Aligned_cols=287  Identities=17%  Similarity=0.143  Sum_probs=210.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccc-cCCCCCCchhhhh-ccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      ||||||||+++++.|+++|++|++++|+..... ..+.. ....... ...++.++.+|++|++++.++++..++|+|||
T Consensus        30 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih  108 (375)
T 1t2a_A           30 TGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEH-LYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYN  108 (375)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGG-GC---------CEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHH-HhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCCEEEE
Confidence            799999999999999999999999999865411 00100 0000000 12578899999999999999998556899999


Q ss_pred             cCCCC----------------cccHHHHHHhCC--CC---CcEEEEeeceeeccCCCCCccC--------ccccchhhHH
Q 021331           79 INGRE----------------ADEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTE  129 (314)
Q Consensus        79 ~a~~~----------------~~~~~~~~~~~~--~~---~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e  129 (314)
                      +|+..                ..++.++++++.  ++   ++||++||.++|+.....++.|        .|+.+|..+|
T Consensus       109 ~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e  188 (375)
T 1t2a_A          109 LGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAY  188 (375)
T ss_dssp             CCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             CCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHHHHHH
Confidence            99863                234677888876  44   7999999999998643322222        6999999999


Q ss_pred             HHHHh----cCCceEEEecCeeeCCCCCCch----hHHHHHHHHcCC-CeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          130 SVLES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       130 ~~~~~----~~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+++.    ++++++++|++.+|||+....+    +..++..+..+. ....++++++.++++|++|+|++++.+++++.
T Consensus       189 ~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~  268 (375)
T 1t2a_A          189 WIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE  268 (375)
T ss_dssp             HHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS
T ss_pred             HHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC
Confidence            98753    5899999999999999754332    234445555554 33345788889999999999999999998765


Q ss_pred             cCCceEEecCCccccHHHHHHHHHHHhCCCCCeee--ecCCccc---------ccCCCCcccCCCcceeecHHhHHhhcC
Q 021331          201 ASRQVFNISGEKYVTFDGLARACAKAAGFPEPELV--HYNPKEF---------DFGKKKAFPFRDQHFFASVEKAKHVLG  269 (314)
Q Consensus       201 ~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~--~~~~~~~---------~~~~~~~~~~~~~~~~~~~~k~~~~lg  269 (314)
                        +++||+++++++|+.|+++.+.+.+|.+. .+.  .+|.+.+         .+......+.......+|++|++++||
T Consensus       269 --~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG  345 (375)
T 1t2a_A          269 --PEDFVIATGEVHSVREFVEKSFLHIGKTI-VWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLN  345 (375)
T ss_dssp             --CCCEEECCSCCEEHHHHHHHHHHHTTCCE-EEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHC
T ss_pred             --CceEEEeCCCcccHHHHHHHHHHHhCCCc-ccccccccccccccccccceeecCcccCCcccchhhcCCHHHHHHhcC
Confidence              47999999999999999999999999764 221  1121110         011111122233456779999999999


Q ss_pred             CCcccChHHHHHHHHhhhhcCC
Q 021331          270 WKPEFDLVEGLADSYNLDFGRG  291 (314)
Q Consensus       270 ~~~~~~~~~~l~~~~~~~~~~~  291 (314)
                      |.|+++++++|+++++|+++..
T Consensus       346 ~~p~~~l~e~l~~~~~~~~~~~  367 (375)
T 1t2a_A          346 WKPRVAFDELVREMVHADVELM  367 (375)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHH
T ss_pred             CCccCCHHHHHHHHHHHHHHhh
Confidence            9999999999999999988743

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=4.6e-37  Score=261.98  Aligned_cols=257  Identities=19%  Similarity=0.228  Sum_probs=200.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||| ||+|++|++.|+++|++|++++|+........           ..+++++.+|+.|.+     +.  ++|+|||+|
T Consensus        11 tGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~d~~-----~~--~~d~vi~~a   71 (286)
T 3ius_A           11 FGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR-----------ASGAEPLLWPGEEPS-----LD--GVTHLLIST   71 (286)
T ss_dssp             ETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH-----------HTTEEEEESSSSCCC-----CT--TCCEEEECC
T ss_pred             ECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh-----------hCCCeEEEecccccc-----cC--CCCEEEECC
Confidence            698 99999999999999999999999876532111           257999999999854     55  899999999


Q ss_pred             CCCcc---cHHHHHHhCC----CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHHhc-CCceEEEec
Q 021331           81 GREAD---EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLESK-GVNWTSLRP  144 (314)
Q Consensus        81 ~~~~~---~~~~~~~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~~~-~~~~~ilR~  144 (314)
                      +....   .+.++++++.    ++++|||+||.++|+.....++.|        .|+.+|..+|+++++. +++++++||
T Consensus        72 ~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ilRp  151 (286)
T 3ius_A           72 APDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRL  151 (286)
T ss_dssp             CCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEEEEEE
T ss_pred             CccccccHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEec
Confidence            87532   3567777764    668999999999998765544444        5999999999999987 999999999


Q ss_pred             CeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCccccHHHHHHHHH
Q 021331          145 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA  224 (314)
Q Consensus       145 ~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~  224 (314)
                      +.+|||+...      +..+..+....+.++ ++.++++|++|+|++++.+++++. .+++||+++++++|+.|+++.+.
T Consensus       152 ~~v~G~~~~~------~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~  223 (286)
T 3ius_A          152 AGIYGPGRGP------FSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD-PGAVYNVCDDEPVPPQDVIAYAA  223 (286)
T ss_dssp             CEEEBTTBSS------STTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC-TTCEEEECCSCCBCHHHHHHHHH
T ss_pred             cceECCCchH------HHHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC-CCCEEEEeCCCCccHHHHHHHHH
Confidence            9999996432      123345565555444 578899999999999999999876 67899999999999999999999


Q ss_pred             HHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCccc-ChHHHHHHHHhhh
Q 021331          225 KAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF-DLVEGLADSYNLD  287 (314)
Q Consensus       225 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~-~~~~~l~~~~~~~  287 (314)
                      +.+|.+.+.....+...  .+.. ..........+|++|++++|||.|++ +++++|+++++..
T Consensus       224 ~~~g~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~~~~  284 (286)
T 3ius_A          224 ELQGLPLPPAVDFDKAD--LTPM-ARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQADA  284 (286)
T ss_dssp             HHHTCCCCCEEEGGGSC--CCHH-HHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHHHHTC
T ss_pred             HHcCCCCCcccchhhhc--cChh-HHHhhcCCceeehHHHHHHhCCCCCcCCHHHHHHHHHHhc
Confidence            99998753333222211  1100 01112356778999999999999999 6999999998753

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=4.5e-36  Score=263.82  Aligned_cols=264  Identities=17%  Similarity=0.180  Sum_probs=207.8

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcccc-cCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC---CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~---~~d~   75 (314)
                      ||||||||++|++.|+++| ++|++++|+..... ..+            .++. +.+|++|++.+..+++..   ++|+
T Consensus        52 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~------------~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~  118 (357)
T 2x6t_A           52 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL------------VDLN-IADYMDKEDFLIQIMAGEEFGDVEA  118 (357)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGT------------TTSC-CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcc------------cCce-EeeecCcHHHHHHHHhhcccCCCCE
Confidence            7999999999999999999 99999999865421 111            1233 678999999999888631   5999


Q ss_pred             EEEcCCCC--------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHH
Q 021331           76 VYDINGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESV  131 (314)
Q Consensus        76 vi~~a~~~--------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~  131 (314)
                      |||+|+..              ..++.+++++|.  ++ +||++||.++|+.....++.|        .|+.+|..+|.+
T Consensus       119 Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~  197 (357)
T 2x6t_A          119 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEY  197 (357)
T ss_dssp             EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHH
T ss_pred             EEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHH
Confidence            99999853              335788999887  77 999999999998655434333        699999999998


Q ss_pred             HHh----cCCceEEEecCeeeCCCCC-----CchhHHHHHHHHcCCCeecCCCCCc-eeeeeeHHHHHHHHHHHhcCCcc
Q 021331          132 LES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQ-VTQLGHVKDLARAFVQVLGNEKA  201 (314)
Q Consensus       132 ~~~----~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~D~a~~~~~~l~~~~~  201 (314)
                      ++.    ++++++++||+.||||+..     ..++..++..+..+..+.++++++. .++++|++|+|++++.+++++. 
T Consensus       198 ~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-  276 (357)
T 2x6t_A          198 VRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-  276 (357)
T ss_dssp             HHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC-
T ss_pred             HHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC-
Confidence            854    4799999999999999754     2466777777888887777778888 8999999999999999998765 


Q ss_pred             CCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCC-CcccChHHHH
Q 021331          202 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGW-KPEFDLVEGL  280 (314)
Q Consensus       202 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~-~~~~~~~~~l  280 (314)
                       +++||+++++++|+.|+++.+.+.+|.+.......+...        ..........|++|+++ ||| .|.++++++|
T Consensus       277 -~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~--------~~~~~~~~~~~~~k~~~-lG~~~~~~~l~e~l  346 (357)
T 2x6t_A          277 -SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKL--------KGRYQAFTQADLTNLRA-AGYDKPFKTVAEGV  346 (357)
T ss_dssp             -CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGGG--------TTSCCSBCCCCCHHHHH-TTCCCCCCCHHHHH
T ss_pred             -CCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCccc--------ccccccccccCHHHHHH-cCCCCCCCCHHHHH
Confidence             789999999999999999999999997621333322210        01112345678999986 999 7888999999


Q ss_pred             HHHHhhhhc
Q 021331          281 ADSYNLDFG  289 (314)
Q Consensus       281 ~~~~~~~~~  289 (314)
                      +++++|+++
T Consensus       347 ~~~~~~~~~  355 (357)
T 2x6t_A          347 TEYMAWLNR  355 (357)
T ss_dssp             HHHHHHHC-
T ss_pred             HHHHHHHhh
Confidence            999999865

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=8.2e-36  Score=264.43  Aligned_cols=280  Identities=17%  Similarity=0.172  Sum_probs=208.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccc-cCCCCCCchhhhhccC-ceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSS-KILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      ||||||||++|++.|+++|++|++++|+..... ..+.. .......... ++.++.+|++|++++.++++..++|+|||
T Consensus        34 tGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih  112 (381)
T 1n7h_A           34 TGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINH-IYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYN  112 (381)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTT-TC--------CCEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhh-hhhccccccccceEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            799999999999999999999999999875411 01110 0000000012 78899999999999999998556799999


Q ss_pred             cCCCCc----------------ccHHHHHHhCC--CCC-----cEEEEeeceeeccCCCCCccC--------ccccchhh
Q 021331           79 INGREA----------------DEVEPILDALP--NLE-----QFIYCSSAGVYLKSDLLPHCE--------SRHKGKLN  127 (314)
Q Consensus        79 ~a~~~~----------------~~~~~~~~~~~--~~~-----~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~  127 (314)
                      +|+...                .++.+++++|.  +++     +|||+||.++|+.... ++.|        .|+.+|..
T Consensus       113 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~~~~~Y~~sK~~  191 (381)
T 1n7h_A          113 LAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCA  191 (381)
T ss_dssp             CCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCCCSHHHHHHHH
T ss_pred             CCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCCCCCchHHHHHH
Confidence            998632                34678888876  443     9999999999986432 3222        69999999


Q ss_pred             HHHHHHh----cCCceEEEecCeeeCCCCCCch----hHHHHHHHHcCCC-eecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          128 TESVLES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       128 ~e~~~~~----~~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      +|.+++.    ++++++++|++.+|||+....+    +..++..+..+.. ...+++++..++++|++|+|++++.++++
T Consensus       192 ~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~  271 (381)
T 1n7h_A          192 AHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQ  271 (381)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhC
Confidence            9998754    4899999999999999754332    2334445555543 33457788899999999999999999987


Q ss_pred             CccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHH
Q 021331          199 EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVE  278 (314)
Q Consensus       199 ~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~  278 (314)
                      +.  +++||+++++++|+.|+++.+.+.+|.+.+....+.+..       ..+.......+|++|++++|||.|++++++
T Consensus       272 ~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e  342 (381)
T 1n7h_A          272 EK--PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRY-------FRPAEVDNLQGDASKAKEVLGWKPQVGFEK  342 (381)
T ss_dssp             SS--CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGG-------SCSSCCCBCCBCCHHHHHHHCCCCCSCHHH
T ss_pred             CC--CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCccc-------CCccccccccCCHHHHHHhcCCcccCCHHH
Confidence            65  579999999999999999999999997531112222111       112223456679999999999999989999


Q ss_pred             HHHHHHhhhhcCC
Q 021331          279 GLADSYNLDFGRG  291 (314)
Q Consensus       279 ~l~~~~~~~~~~~  291 (314)
                      +|+++++|+.++.
T Consensus       343 ~l~~~~~~~~~~~  355 (381)
T 1n7h_A          343 LVKMMVDEDLELA  355 (381)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhc
Confidence            9999999998754

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=2e-36  Score=261.60  Aligned_cols=261  Identities=18%  Similarity=0.147  Sum_probs=191.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++++++|+++|++|++++|+...                 .+  ++.+|++|++++.++++..++|+|||+|
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A   68 (315)
T 2ydy_A            8 TGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCA   68 (315)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEC-------------------------------------CHHHHHHHCCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------------CC--eEEecCCCHHHHHHHHHhhCCCEEEECC
Confidence            7999999999999999999999999987543                 12  6789999999999998744599999999


Q ss_pred             CC----------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHHh
Q 021331           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLES  134 (314)
Q Consensus        81 ~~----------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~~  134 (314)
                      +.                |..++.++++++.  ++ +|||+||.++|+.. ..|+.|        .|+.+|..+|.+++.
T Consensus        69 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~~-~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  146 (315)
T 2ydy_A           69 AERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDGT-NPPYREEDIPAPLNLYGKTKLDGEKAVLE  146 (315)
T ss_dssp             -------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCSS-SCSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCCC-CCCCCCCCCCCCcCHHHHHHHHHHHHHHH
Confidence            85                2345788999887  55 99999999999762 222222        699999999999999


Q ss_pred             cCCceEEEecCeeeCCCCCC--chhHHHHHHHH-cCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC---ccCCceEEe
Q 021331          135 KGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLK-AGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE---KASRQVFNI  208 (314)
Q Consensus       135 ~~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~---~~~~~~~~i  208 (314)
                      .+++++++||+.||||....  .++..++..+. .+..+.+.  +++.++++|++|+|++++.++.++   ...+++||+
T Consensus       147 ~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i  224 (315)
T 2ydy_A          147 NNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHW  224 (315)
T ss_dssp             HCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEEC
T ss_pred             hCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEE
Confidence            89999999999999997541  34555566666 66665553  356789999999999999998753   235789999


Q ss_pred             cCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHhhhh
Q 021331          209 SGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDF  288 (314)
Q Consensus       209 ~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~~~  288 (314)
                      ++++++|+.|+++.+.+.+|.+.+.+...+...   .   ..........+|++|++++ ||.|+++++++|+++++|+.
T Consensus       225 ~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~---~---~~~~~~~~~~~d~~k~~~~-G~~p~~~~~~~l~~~~~~~~  297 (315)
T 2ydy_A          225 SGNEQMTKYEMACAIADAFNLPSSHLRPITDSP---V---LGAQRPRNAQLDCSKLETL-GIGQRTPFRIGIKESLWPFL  297 (315)
T ss_dssp             CCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCC---C---SSSCCCSBCCBCCHHHHHT-TCCCCCCHHHHHHHHHGGGC
T ss_pred             cCCCcccHHHHHHHHHHHhCCChhheecccccc---c---cccCCCcccccchHHHHhc-CCCCCCCHHHHHHHHHHHHc
Confidence            999999999999999999998764344444310   0   0111234667899999997 99999999999999999998


Q ss_pred             cCC
Q 021331          289 GRG  291 (314)
Q Consensus       289 ~~~  291 (314)
                      ++.
T Consensus       298 ~~~  300 (315)
T 2ydy_A          298 IDK  300 (315)
T ss_dssp             C--
T ss_pred             cch
Confidence            763

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=2.4e-36  Score=260.68  Aligned_cols=264  Identities=14%  Similarity=0.043  Sum_probs=202.2

Q ss_pred             CCcccccHHHHHHHHHHC--CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      ||||||||++|+++|+++  |++|++++|+.....  +           ..++.++.+|++|++++.++++..++|+|||
T Consensus         8 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~-----------~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   74 (312)
T 2yy7_A            8 IGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD--V-----------VNSGPFEVVNALDFNQIEHLVEVHKITDIYL   74 (312)
T ss_dssp             ETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH--H-----------HHSSCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             ECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc--c-----------cCCCceEEecCCCHHHHHHHHhhcCCCEEEE
Confidence            799999999999999999  899999999765411  0           1457889999999999999998778999999


Q ss_pred             cCCCC---------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCC-CCcc--------CccccchhhHHHHH
Q 021331           79 INGRE---------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL-LPHC--------ESRHKGKLNTESVL  132 (314)
Q Consensus        79 ~a~~~---------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~-~~~~--------e~~~~~k~~~e~~~  132 (314)
                      +|+..               ..++.+++++|.  ++++|||+||.++|+.... .+..        ..|+.+|..+|.++
T Consensus        75 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~  154 (312)
T 2yy7_A           75 MAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWC  154 (312)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHH
T ss_pred             CCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHH
Confidence            99863               234678888877  6789999999999976321 1111        16999999999987


Q ss_pred             Hh----cCCceEEEecCeeeCCCCC--C---c-hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCcc-
Q 021331          133 ES----KGVNWTSLRPVYIYGPLNY--N---P-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA-  201 (314)
Q Consensus       133 ~~----~~~~~~ilR~~~v~g~~~~--~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-  201 (314)
                      +.    ++++++++||+.+|||+..  .   . +...+... ..+..+.+++++++.++++|++|+|++++.+++++.. 
T Consensus       155 ~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~  233 (312)
T 2yy7_A          155 EYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKA-IADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEK  233 (312)
T ss_dssp             HHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHH-HHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGG
T ss_pred             HHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHH-HcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccc
Confidence            53    5899999999999997521  1   1 33333333 3445556667788899999999999999999987653 


Q ss_pred             --CCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHH
Q 021331          202 --SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEG  279 (314)
Q Consensus       202 --~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~  279 (314)
                        .+++||+++ +.+|+.|+++.+.+.+|. . .+...+....       .........+|++|++++|||.|+++++++
T Consensus       234 ~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~-~-~i~~~~~~~~-------~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~  303 (312)
T 2yy7_A          234 IKIHSSYNLAA-MSFTPTEIANEIKKHIPE-F-TITYEPDFRQ-------KIADSWPASIDDSQAREDWDWKHTFDLESM  303 (312)
T ss_dssp             CCCSSCEECCS-EEECHHHHHHHHHTTCTT-C-EEEECCCTHH-------HHHTTSCSSBCCHHHHHHHCCCCCCCHHHH
T ss_pred             cccCceEEeCC-CccCHHHHHHHHHHHCCC-C-ceEeccCccc-------cccccccccCCHHHHHHHcCCCCCCCHHHH
Confidence              248999997 789999999999999983 2 3322221000       000112346799999999999999999999


Q ss_pred             HHHHHhhhh
Q 021331          280 LADSYNLDF  288 (314)
Q Consensus       280 l~~~~~~~~  288 (314)
                      |+++++|++
T Consensus       304 l~~~~~~~k  312 (312)
T 2yy7_A          304 TKDMIEHLS  312 (312)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhC
Confidence            999999874

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-36  Score=265.82  Aligned_cols=287  Identities=20%  Similarity=0.196  Sum_probs=207.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccc-cCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      ||||||||+++++.|+++|++|++++|+..... ..+.. ..........++.++.+|++|++++.++++..++|+|||+
T Consensus         7 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   85 (372)
T 1db3_A            7 TGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDH-IYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNL   85 (372)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHHCCSEEEEC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHH-HhhccccCCCceEEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence            799999999999999999999999999865311 11110 0000000024788999999999999999985568999999


Q ss_pred             CCCC----------------cccHHHHHHhCC--CC---CcEEEEeeceeeccCCCCCccC--------ccccchhhHHH
Q 021331           80 NGRE----------------ADEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTES  130 (314)
Q Consensus        80 a~~~----------------~~~~~~~~~~~~--~~---~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~  130 (314)
                      |+..                ..++.++++++.  ++   ++||++||.++|+.....+..|        .|+.+|..+|.
T Consensus        86 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  165 (372)
T 1db3_A           86 GAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYW  165 (372)
T ss_dssp             CCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             CcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHHHHHHH
Confidence            9852                234677888876  55   7999999999998654323222        69999999999


Q ss_pred             HHH----hcCCceEEEecCeeeCCCCCCch----hHHHHHHHHcCCC-eecCCCCCceeeeeeHHHHHHHHHHHhcCCcc
Q 021331          131 VLE----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  201 (314)
Q Consensus       131 ~~~----~~~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~  201 (314)
                      +++    +++++++++|++.+|||+....+    +..++..+..+.. ...++++++.++++|++|+|++++.+++++. 
T Consensus       166 ~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~-  244 (372)
T 1db3_A          166 ITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ-  244 (372)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS-
T ss_pred             HHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhcCC-
Confidence            875    35899999999999999754332    3444555556653 3345788899999999999999999998764 


Q ss_pred             CCceEEecCCccccHHHHHHHHHHHhCCCCCeeee--cCCc-c------------------cccCCCCcccCCCcceeec
Q 021331          202 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVH--YNPK-E------------------FDFGKKKAFPFRDQHFFAS  260 (314)
Q Consensus       202 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~--~~~~-~------------------~~~~~~~~~~~~~~~~~~~  260 (314)
                       +++||+++++++|+.|+++.+.+.+|.+. .+..  .|.+ .                  ..+......+........|
T Consensus       245 -~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  322 (372)
T 1db3_A          245 -PEDFVIATGVQYSVRQFVEMAAAQLGIKL-RFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGD  322 (372)
T ss_dssp             -CCCEEECCCCCEEHHHHHHHHHHTTTEEE-EEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCCBC
T ss_pred             -CceEEEcCCCceeHHHHHHHHHHHhCCCc-ccccccccccccccccccccccccccccceeeccccccCCCchhhhccC
Confidence             57999999999999999999999999653 2111  1110 0                  0000110122233456789


Q ss_pred             HHhHHhhcCCCcccChHHHHHHHHhhhhcCC
Q 021331          261 VEKAKHVLGWKPEFDLVEGLADSYNLDFGRG  291 (314)
Q Consensus       261 ~~k~~~~lg~~~~~~~~~~l~~~~~~~~~~~  291 (314)
                      ++|++++|||.|+++++++|+++++|+++..
T Consensus       323 ~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~  353 (372)
T 1db3_A          323 PTKAHEKLGWKPEITLREMVSEMVANDLEAA  353 (372)
T ss_dssp             CHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCccccCHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999998754

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=2.2e-35  Score=258.14  Aligned_cols=280  Identities=21%  Similarity=0.221  Sum_probs=209.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      ||||||||+++++.|+++|++|++++|+......       ..+...  ..++.++.+|++|++++.++++..++|+|||
T Consensus         9 tGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   81 (345)
T 2z1m_A            9 TGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS-------WRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN   81 (345)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT-------HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEECCCccccc-------ccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            7999999999999999999999999998754210       011111  1468899999999999999998556799999


Q ss_pred             cCCCC----------------cccHHHHHHhCC--CC-CcEEEEeeceeeccCCCCCccC--------ccccchhhHHHH
Q 021331           79 INGRE----------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESV  131 (314)
Q Consensus        79 ~a~~~----------------~~~~~~~~~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~  131 (314)
                      +|+..                ..++.+++++|.  ++ ++||++||.++||.....|+.|        .|+.+|..+|.+
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  161 (345)
T 2z1m_A           82 LAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWI  161 (345)
T ss_dssp             CCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             CCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHH
Confidence            99863                234678888877  65 7999999999998644323222        699999999998


Q ss_pred             HHh----cCCceEEEecCeeeCCCCCCchh----HHHHHHHHcCCC-eecCCCCCceeeeeeHHHHHHHHHHHhcCCccC
Q 021331          132 LES----KGVNWTSLRPVYIYGPLNYNPVE----EWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  202 (314)
Q Consensus       132 ~~~----~~~~~~ilR~~~v~g~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~  202 (314)
                      ++.    ++++++++|+.++|||+......    ..++..+..+.. ..+++++...++++|++|+|++++.+++++.  
T Consensus       162 ~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~--  239 (345)
T 2z1m_A          162 TVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE--  239 (345)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS--
T ss_pred             HHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC--
Confidence            754    48999999999999997543222    223444445543 3345777888999999999999999998765  


Q ss_pred             CceEEecCCccccHHHHHHHHHHHhCCCCCeeee--cCCccc---------ccCCCCcccCCCcceeecHHhHHhhcCCC
Q 021331          203 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVH--YNPKEF---------DFGKKKAFPFRDQHFFASVEKAKHVLGWK  271 (314)
Q Consensus       203 ~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~--~~~~~~---------~~~~~~~~~~~~~~~~~~~~k~~~~lg~~  271 (314)
                      +++||+++++++|+.|+++.+.+.+|.+. .+..  +|...+         ........+........|++|++++|||.
T Consensus       240 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~  318 (345)
T 2z1m_A          240 PDDYVIATGETHTVREFVEKAAKIAGFDI-EWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNPEKAMKKLGWK  318 (345)
T ss_dssp             CCCEEECCSCCEEHHHHHHHHHHHTTCCE-EEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCC
T ss_pred             CceEEEeCCCCccHHHHHHHHHHHhCCCc-cccccccccccccccccccccccCcccCCCCCcceeecCHHHHHHHcCCc
Confidence            47999999999999999999999999764 2221  111110         01111112223345667999999999999


Q ss_pred             cccChHHHHHHHHhhhhcC
Q 021331          272 PEFDLVEGLADSYNLDFGR  290 (314)
Q Consensus       272 ~~~~~~~~l~~~~~~~~~~  290 (314)
                      |+++++++++++++|++++
T Consensus       319 p~~~~~~~l~~~~~~~~~~  337 (345)
T 2z1m_A          319 PRTTFDELVEIMMEADLKR  337 (345)
T ss_dssp             CCSCHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHH
Confidence            9999999999999998874

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=4.2e-35  Score=276.80  Aligned_cols=278  Identities=19%  Similarity=0.225  Sum_probs=215.9

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhh-HHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF-VKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-l~~~~~~~~~d~vi~   78 (314)
                      ||||||||++++++|+++ |++|++++|+.........          ..++.++.+|++|+++ +.++++  ++|+|||
T Consensus       321 TGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~----------~~~v~~v~~Dl~d~~~~~~~~~~--~~D~Vih  388 (660)
T 1z7e_A          321 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP  388 (660)
T ss_dssp             ETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTT----------CTTEEEEECCTTTCHHHHHHHHH--HCSEEEE
T ss_pred             EcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhcc----------CCceEEEECCCCCcHHHHHHhhc--CCCEEEE
Confidence            799999999999999998 8999999998765322221          2578999999999765 778888  8999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC-CCCcEEEEeeceeeccCCCCCccC---------------ccccchh
Q 021331           79 INGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCE---------------SRHKGKL  126 (314)
Q Consensus        79 ~a~~~----------------~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e---------------~~~~~k~  126 (314)
                      +|+..                ..++.+++++|. ..++|||+||.++|+.....++.|               .|+.+|.
T Consensus       389 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~  468 (660)
T 1z7e_A          389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ  468 (660)
T ss_dssp             CCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHH
T ss_pred             CceecCccccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHH
Confidence            99863                235778888887 228999999999997654333222               4899999


Q ss_pred             hHHHHHH----hcCCceEEEecCeeeCCCCC---------CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHH
Q 021331          127 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  193 (314)
Q Consensus       127 ~~e~~~~----~~~~~~~ilR~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  193 (314)
                      .+|.+++    +++++++++||+.||||+..         ..++..++..+..+.++.+++++++.++++|++|+|++++
T Consensus       469 ~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~  548 (660)
T 1z7e_A          469 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY  548 (660)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHH
Confidence            9999884    45899999999999999753         3456677778888888777777888999999999999999


Q ss_pred             HHhcCCc--cCCceEEecCCc-cccHHHHHHHHHHHhCCCCCeeeecCCccc-cc-CCC---CcccCCCcceeecHHhHH
Q 021331          194 QVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKAAGFPEPELVHYNPKEF-DF-GKK---KAFPFRDQHFFASVEKAK  265 (314)
Q Consensus       194 ~~l~~~~--~~~~~~~i~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~~-~~-~~~---~~~~~~~~~~~~~~~k~~  265 (314)
                      .++.++.  ..+++||+++++ ++|+.|+++.+.+.+|.+... ..++.... .. ...   ............|++|++
T Consensus       549 ~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~  627 (660)
T 1z7e_A          549 RIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR-HHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAH  627 (660)
T ss_dssp             HHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTG-GGSCCCCCEEEECTHHHHCTTCCCCSCCCBCCHHHH
T ss_pred             HHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcc-cccCccccccchhccccccccccchhhcccCHHHHH
Confidence            9998754  357899999986 899999999999999865422 22332210 00 000   000012245677999999


Q ss_pred             hhcCCCcccChHHHHHHHHhhhhcCC
Q 021331          266 HVLGWKPEFDLVEGLADSYNLDFGRG  291 (314)
Q Consensus       266 ~~lg~~~~~~~~~~l~~~~~~~~~~~  291 (314)
                      ++|||.|+++++++|+++++|+.++.
T Consensus       628 ~~LG~~p~~~l~egl~~~i~~~~~~~  653 (660)
T 1z7e_A          628 RCLDWEPKIDMQETIDETLDFFLRTV  653 (660)
T ss_dssp             HHHCCCCCCCHHHHHHHHHHHHHTTS
T ss_pred             HhcCCCccCcHHHHHHHHHHHHHhhc
Confidence            99999999999999999999998765

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=9e-35  Score=251.42  Aligned_cols=265  Identities=15%  Similarity=0.057  Sum_probs=201.5

Q ss_pred             CCcccccHHHHHHHHHHC--CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      ||||||||+++++.|+++  |++|++++|+....                .++.++.+|++|++++.++++..++|+|||
T Consensus         5 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----------------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   68 (317)
T 3ajr_A            5 TGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT----------------GGIKFITLDVSNRDEIDRAVEKYSIDAIFH   68 (317)
T ss_dssp             ESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC----------------TTCCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             EcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc----------------cCceEEEecCCCHHHHHHHHhhcCCcEEEE
Confidence            799999999999999998  89999999876441                246788999999999999997668999999


Q ss_pred             cCCCC---------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCC-CCcc--------CccccchhhHHHHH
Q 021331           79 INGRE---------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL-LPHC--------ESRHKGKLNTESVL  132 (314)
Q Consensus        79 ~a~~~---------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~-~~~~--------e~~~~~k~~~e~~~  132 (314)
                      +|+..               ..++.+++++|.  ++++||++||.++|+.... .+..        ..|+.+|..+|.++
T Consensus        69 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~  148 (317)
T 3ajr_A           69 LAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLG  148 (317)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHH
Confidence            99863               234678888887  7789999999999986421 1111        26899999999887


Q ss_pred             H----hcCCceEEEecCeeeCCCCC-----CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCcc--
Q 021331          133 E----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA--  201 (314)
Q Consensus       133 ~----~~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~--  201 (314)
                      +    +++++++++||+.+||+...     .......+.....+..+..+++++..++++|++|+|++++.++.++..  
T Consensus       149 ~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~  228 (317)
T 3ajr_A          149 QYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKL  228 (317)
T ss_dssp             HHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGC
T ss_pred             HHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCcccc
Confidence            4    45899999999999997421     122222333344445555667778889999999999999999987643  


Q ss_pred             -CCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHH
Q 021331          202 -SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGL  280 (314)
Q Consensus       202 -~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l  280 (314)
                       .+++||+++ ..+|+.|+++.+.+.+|..  .+...+....       ......+..+|++|++++|||.|++++++++
T Consensus       229 ~~g~~~~i~~-~~~s~~e~~~~i~~~~~~~--~i~~~~~~~~-------~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l  298 (317)
T 3ajr_A          229 VLRNGYNVTA-YTFTPSELYSKIKERIPEF--EIEYKEDFRD-------KIAATWPESLDSSEASNEWGFSIEYDLDRTI  298 (317)
T ss_dssp             SSCSCEECCS-EEECHHHHHHHHHTTCCSC--CEEECCCHHH-------HHHTTSCSCBCCHHHHHHHCCCCCCCHHHHH
T ss_pred             ccCceEecCC-ccccHHHHHHHHHHHCCcc--ccccccccch-------hhccccccccCHHHHHHHcCCCCCCCHHHHH
Confidence             358999987 5799999999999998832  2222221000       0001123457999999999999999999999


Q ss_pred             HHHHhhhhcCC
Q 021331          281 ADSYNLDFGRG  291 (314)
Q Consensus       281 ~~~~~~~~~~~  291 (314)
                      +++++|+.++.
T Consensus       299 ~~~~~~~~~~~  309 (317)
T 3ajr_A          299 DDMIDHISEKL  309 (317)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHhhh
Confidence            99999987743

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=7.5e-35  Score=256.65  Aligned_cols=280  Identities=19%  Similarity=0.204  Sum_probs=204.2

Q ss_pred             CCcccccHHHHHHHHHHCC-----CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCC-cc
Q 021331            1 MGGTRFIGVFLSRLLVKEG-----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG-FD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~-~d   74 (314)
                      ||||||+|++|++.|+++|     ++|++++|+.....  ..          ..+++++.+|++|++++.++++..+ +|
T Consensus         7 tGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--~~----------~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   74 (364)
T 2v6g_A            7 VGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--HE----------DNPINYVQCDISDPDDSQAKLSPLTDVT   74 (364)
T ss_dssp             ETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--CC----------SSCCEEEECCTTSHHHHHHHHTTCTTCC
T ss_pred             ECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--cc----------cCceEEEEeecCCHHHHHHHHhcCCCCC
Confidence            7999999999999999999     99999999876532  11          2578999999999999999998333 99


Q ss_pred             EEEEcCCCC-----------cccHHHHHHhCC----CCCcEE-------EEeeceeeccCC--CCCccCcc-----ccch
Q 021331           75 VVYDINGRE-----------ADEVEPILDALP----NLEQFI-------YCSSAGVYLKSD--LLPHCESR-----HKGK  125 (314)
Q Consensus        75 ~vi~~a~~~-----------~~~~~~~~~~~~----~~~~~i-------~~Ss~~v~~~~~--~~~~~e~~-----~~~k  125 (314)
                      +|||+|+..           ..++.+++++|.    ++++||       |+||.++||...  ..|+.|..     ....
T Consensus        75 ~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y  154 (364)
T 2v6g_A           75 HVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFY  154 (364)
T ss_dssp             EEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHH
T ss_pred             EEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhh
Confidence            999999863           345788999877    367887       799999998642  22333310     0011


Q ss_pred             hhHHHHHH----hcC-CceEEEecCeeeCCCCCC--c-hhHH-HHHHH--HcCCCeecCCCCC---ceeeeeeHHHHHHH
Q 021331          126 LNTESVLE----SKG-VNWTSLRPVYIYGPLNYN--P-VEEW-FFHRL--KAGRPIPIPGSGI---QVTQLGHVKDLARA  191 (314)
Q Consensus       126 ~~~e~~~~----~~~-~~~~ilR~~~v~g~~~~~--~-~~~~-~~~~~--~~~~~~~~~~~~~---~~~~~i~~~D~a~~  191 (314)
                      ..+|+++.    .++ ++++++||+.||||+...  . +... ++..+  ..+.++.++++++   ...++++++|+|++
T Consensus       155 ~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a  234 (364)
T 2v6g_A          155 YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEH  234 (364)
T ss_dssp             HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHH
T ss_pred             HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHH
Confidence            34555553    355 999999999999997542  2 2333 33334  3567767667663   44788899999999


Q ss_pred             HHHHhcCCccCCceEEecCCccccHHHHHHHHHHHhCCCCCee-eecCCcccccCCC------------CcccC------
Q 021331          192 FVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPEL-VHYNPKEFDFGKK------------KAFPF------  252 (314)
Q Consensus       192 ~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~------------~~~~~------  252 (314)
                      ++.++.++...+++||+++++++|+.|+++.+.+.+|.+...+ ...|.+...+...            ...+.      
T Consensus       235 ~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (364)
T 2v6g_A          235 HIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENGLTPTKLKDVG  314 (364)
T ss_dssp             HHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTTCCCCCHHHHC
T ss_pred             HHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHhCCCcccccccc
Confidence            9999988755678999999999999999999999999865322 1333321110000            00000      


Q ss_pred             --------CCcc-eeecHHhHHhhcCCCcccChHHHHHHHHhhhhcCCCc
Q 021331          253 --------RDQH-FFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTY  293 (314)
Q Consensus       253 --------~~~~-~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~  293 (314)
                              .... ..+|++|+++ |||.|.++++++++++++|+++.+.+
T Consensus       315 ~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~l~~~~~~~~~~g~l  363 (364)
T 2v6g_A          315 IWWFGDVILGNECFLDSMNKSKE-HGFLGFRNSKNAFISWIDKAKAYKIV  363 (364)
T ss_dssp             CHHHHHHHHTSCCCCBCCHHHHH-TTCCCCCCHHHHHHHHHHHHHHTTSC
T ss_pred             ccchhhhccccchhhcchHHHHh-cCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence                    0134 5789999988 99999889999999999999988765

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=4.7e-34  Score=249.53  Aligned_cols=268  Identities=15%  Similarity=0.081  Sum_probs=204.6

Q ss_pred             CCcccccHHHHHHHHHHCC-------CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCc
Q 021331            1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~   73 (314)
                      |||+||||+++++.|+++|       ++|++++|+...... ..          ..++.++.+|++|++++.++++ .++
T Consensus        20 tGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-~~----------~~~~~~~~~Dl~d~~~~~~~~~-~~~   87 (342)
T 2hrz_A           20 IGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-GF----------SGAVDARAADLSAPGEAEKLVE-ARP   87 (342)
T ss_dssp             ETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-TC----------CSEEEEEECCTTSTTHHHHHHH-TCC
T ss_pred             ECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-cc----------CCceeEEEcCCCCHHHHHHHHh-cCC
Confidence            7999999999999999999       899999998654221 01          2578899999999999999883 279


Q ss_pred             cEEEEcCCCC---------------cccHHHHHHhCC--C-----CCcEEEEeeceeeccCCCCCccC--------cccc
Q 021331           74 DVVYDINGRE---------------ADEVEPILDALP--N-----LEQFIYCSSAGVYLKSDLLPHCE--------SRHK  123 (314)
Q Consensus        74 d~vi~~a~~~---------------~~~~~~~~~~~~--~-----~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~  123 (314)
                      |+|||+|+..               ..++.+++++|.  +     +++||++||..+|+.....+.+|        .|+.
T Consensus        88 d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~  167 (342)
T 2hrz_A           88 DVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGT  167 (342)
T ss_dssp             SEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHH
T ss_pred             CEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHH
Confidence            9999999863               234678888876  4     78999999999998643222222        6899


Q ss_pred             chhhHHHHHHh----cCCceEEEecCeeeC-CCCC----CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHH
Q 021331          124 GKLNTESVLES----KGVNWTSLRPVYIYG-PLNY----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       124 ~k~~~e~~~~~----~~~~~~ilR~~~v~g-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                      +|..+|.++++    .+++++++|++.+|| |+..    ..++..++.....+.+..++++++...+++|++|+|++++.
T Consensus       168 sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~  247 (342)
T 2hrz_A          168 QKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIH  247 (342)
T ss_dssp             HHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHH
Confidence            99999998754    368999999999998 7542    23556667777777776666666677889999999999999


Q ss_pred             HhcCCcc---CCceEEecCCccccHHHHHHHHHHHhCCCCC-eeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCC
Q 021331          195 VLGNEKA---SRQVFNISGEKYVTFDGLARACAKAAGFPEP-ELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGW  270 (314)
Q Consensus       195 ~l~~~~~---~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~  270 (314)
                      ++..+..   .+++||++ ++.+|+.|+++.+.+.+|.+.+ .+...+.....      .........+|++|+++ |||
T Consensus       248 ~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~------~~~~~~~~~~d~~k~~~-lG~  319 (342)
T 2hrz_A          248 GAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEMIM------RMCEGWAPGFEAKRARE-LGF  319 (342)
T ss_dssp             HHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHH------HHHTTSCCCBCCHHHHH-TTC
T ss_pred             HHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcchh------hhhcccccccChHHHHH-cCC
Confidence            9987642   46799996 4679999999999999996531 12222211100      00001123579999998 999


Q ss_pred             CcccChHHHHHHHHhhhh
Q 021331          271 KPEFDLVEGLADSYNLDF  288 (314)
Q Consensus       271 ~~~~~~~~~l~~~~~~~~  288 (314)
                      .|+++++++|+++++|++
T Consensus       320 ~p~~~l~e~l~~~~~~~~  337 (342)
T 2hrz_A          320 TAESSFEEIIQVHIEDEL  337 (342)
T ss_dssp             CCCSSHHHHHHHHHHHHS
T ss_pred             CCCCCHHHHHHHHHHHhc
Confidence            999999999999999987

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=9.6e-34  Score=269.48  Aligned_cols=276  Identities=20%  Similarity=0.230  Sum_probs=205.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh-ccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      ||||||||++|++.|+++|++|++++|+........     ..+.. ...++.++.+|++|++++.++++..++|+|||+
T Consensus        17 TGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih~   91 (699)
T 1z45_A           17 TGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSV-----ARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   91 (699)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHH-----HHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHH-----HHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEEEC
Confidence            799999999999999999999999998764311000     01110 025788999999999999999986689999999


Q ss_pred             CCCCc----------------ccHHHHHHhCC--CCCcEEEEeeceeeccCC----CCCcc--------CccccchhhHH
Q 021331           80 NGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSD----LLPHC--------ESRHKGKLNTE  129 (314)
Q Consensus        80 a~~~~----------------~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~----~~~~~--------e~~~~~k~~~e  129 (314)
                      |+...                .++.+++++|.  ++++||++||.++|+...    ..+..        ..|+.+|..+|
T Consensus        92 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E  171 (699)
T 1z45_A           92 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIE  171 (699)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             CcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHHHHH
Confidence            98632                34678888886  788999999999997431    11222        16999999999


Q ss_pred             HHHHh------cCCceEEEecCeeeCCCCC-----------CchhHHHHHHHHc-CCCeecCC------CCCceeeeeeH
Q 021331          130 SVLES------KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKA-GRPIPIPG------SGIQVTQLGHV  185 (314)
Q Consensus       130 ~~~~~------~~~~~~ilR~~~v~g~~~~-----------~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~i~~  185 (314)
                      ++++.      .+++++++||+.+|||+..           ..++..+...... +.++.+++      ++++.++++|+
T Consensus       172 ~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v  251 (699)
T 1z45_A          172 NILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHV  251 (699)
T ss_dssp             HHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEH
T ss_pred             HHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEH
Confidence            98864      5899999999999998521           2244444333332 24555555      57788999999


Q ss_pred             HHHHHHHHHHhcCC------ccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceee
Q 021331          186 KDLARAFVQVLGNE------KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFA  259 (314)
Q Consensus       186 ~D~a~~~~~~l~~~------~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (314)
                      +|+|++++.++.+.      ...+++||+++++.+|+.|+++.+.+.+|.+.+ +...+.          .........+
T Consensus       252 ~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~----------~~~~~~~~~~  320 (699)
T 1z45_A          252 VDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLP-YKVTGR----------RAGDVLNLTA  320 (699)
T ss_dssp             HHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCC-C-------------------CCCCCB
T ss_pred             HHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCC-ceecCC----------CCCccccccC
Confidence            99999999988642      123579999999999999999999999997652 221111          1112345678


Q ss_pred             cHHhHHhhcCCCcccChHHHHHHHHhhhhcCCC
Q 021331          260 SVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGT  292 (314)
Q Consensus       260 ~~~k~~~~lg~~~~~~~~~~l~~~~~~~~~~~~  292 (314)
                      |++|++++|||.|+++++++|+++++|++++..
T Consensus       321 d~~ka~~~LG~~p~~~l~egl~~~~~w~~~~~~  353 (699)
T 1z45_A          321 KPDRAKRELKWQTELQVEDSCKDLWKWTTENPF  353 (699)
T ss_dssp             CCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred             CHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCc
Confidence            999999999999999999999999999987543

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=6e-35  Score=248.99  Aligned_cols=257  Identities=18%  Similarity=0.193  Sum_probs=198.5

Q ss_pred             CCcccccHHHHHHHHHHC--CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      ||||||+|+++++.|+++  |++|++++|++.+... +        .  ..+++++.+|++|++++.++++  ++|+|||
T Consensus         6 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-l--------~--~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~   72 (287)
T 2jl1_A            6 TGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST-L--------A--DQGVEVRHGDYNQPESLQKAFA--GVSKLLF   72 (287)
T ss_dssp             TTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH-H--------H--HTTCEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred             EcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH-H--------h--hcCCeEEEeccCCHHHHHHHHh--cCCEEEE
Confidence            799999999999999998  9999999998654211 1        0  2478899999999999999998  8999999


Q ss_pred             cCCC------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCceEEEecCeeeCC
Q 021331           79 INGR------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGP  150 (314)
Q Consensus        79 ~a~~------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~~~ilR~~~v~g~  150 (314)
                      +++.      |..++.+++++|.  ++++||++||.+++..    |.  .|+.+|..+|+++++++++++++||+.++|+
T Consensus        73 ~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~----~~--~y~~~K~~~E~~~~~~~~~~~ilrp~~~~~~  146 (287)
T 2jl1_A           73 ISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEES----II--PLAHVHLATEYAIRTTNIPYTFLRNALYTDF  146 (287)
T ss_dssp             CCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC----CS--THHHHHHHHHHHHHHTTCCEEEEEECCBHHH
T ss_pred             cCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC----CC--chHHHHHHHHHHHHHcCCCeEEEECCEeccc
Confidence            9986      4567889999987  7889999999888742    11  5899999999999999999999999988876


Q ss_pred             CCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCccccHHHHHHHHHHHhCCC
Q 021331          151 LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFP  230 (314)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~  230 (314)
                      .. ..++.   ..+..+. ... +.++..++++|++|+|++++.++.++...+++||+++++.+|+.|+++.+.+.+|.+
T Consensus       147 ~~-~~~~~---~~~~~~~-~~~-~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~  220 (287)
T 2jl1_A          147 FV-NEGLR---ASTESGA-IVT-NAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKK  220 (287)
T ss_dssp             HS-SGGGH---HHHHHTE-EEE-SCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHHHHHHHHHHHHSSC
T ss_pred             cc-hhhHH---HHhhCCc-eec-cCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHHHHHHHHHHHHCCc
Confidence            31 11222   2222333 333 445677899999999999999998865567899999999999999999999999987


Q ss_pred             CCeeeecCCccccc-----CCCCcc---------cCCCcceeecHHhHHhhcCCCcccChHHHHHHHHh
Q 021331          231 EPELVHYNPKEFDF-----GKKKAF---------PFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYN  285 (314)
Q Consensus       231 ~~~~~~~~~~~~~~-----~~~~~~---------~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~  285 (314)
                      . .+...+...+..     +.....         ......+..|++|+++.||  |+++++++++++++
T Consensus       221 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG--~~~~l~e~l~~~~~  286 (287)
T 2jl1_A          221 V-VHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG--SLTPLKETVKQALK  286 (287)
T ss_dssp             C-EEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHS--SCCCHHHHHHHHHT
T ss_pred             c-eEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhC--CCCCHHHHHHHHhc
Confidence            6 566665432211     100000         0011345668899999999  66799999999876

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=100.00  E-value=8.8e-35  Score=247.83  Aligned_cols=259  Identities=18%  Similarity=0.227  Sum_probs=196.4

Q ss_pred             CCcccccHHHHHHHHHHC--CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      |||||++|+++++.|+++  |++|++++|+++.... +.          ..++.++.+|++|++++.++++  ++|+|||
T Consensus         5 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~----------~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~   71 (286)
T 2zcu_A            5 TGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA-LA----------AQGITVRQADYGDEAALTSALQ--GVEKLLL   71 (286)
T ss_dssp             ESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH-HH----------HTTCEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred             EcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh-hh----------cCCCeEEEcCCCCHHHHHHHHh--CCCEEEE
Confidence            799999999999999998  9999999998654211 10          1468899999999999999998  8999999


Q ss_pred             cCCC----CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCceEEEecCeeeCCCC
Q 021331           79 INGR----EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLN  152 (314)
Q Consensus        79 ~a~~----~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~~~ilR~~~v~g~~~  152 (314)
                      +++.    +..++.+++++|.  ++++||++||.++|..    |  ..|+.+|..+|+++++.+++++++||+.++++. 
T Consensus        72 ~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~----~--~~y~~sK~~~e~~~~~~~~~~~ilrp~~~~~~~-  144 (286)
T 2zcu_A           72 ISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADTS----P--LGLADEHIETEKMLADSGIVYTLLRNGWYSENY-  144 (286)
T ss_dssp             CC--------CHHHHHHHHHHHHTCCEEEEEEETTTTTC----C--STTHHHHHHHHHHHHHHCSEEEEEEECCBHHHH-
T ss_pred             eCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC----c--chhHHHHHHHHHHHHHcCCCeEEEeChHHhhhh-
Confidence            9985    4567899999987  7899999999888731    2  158999999999999999999999998766542 


Q ss_pred             CCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCccccHHHHHHHHHHHhCCCCC
Q 021331          153 YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEP  232 (314)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~  232 (314)
                          .. ++........+.+ +.++..++++|++|+|++++.++.++...+++||+++++.+|+.|+++.+.+.+|.+. 
T Consensus       145 ----~~-~~~~~~~~~~~~~-~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~-  217 (286)
T 2zcu_A          145 ----LA-SAPAALEHGVFIG-AAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQV-  217 (286)
T ss_dssp             ----HT-THHHHHHHTEEEE-SCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSCBCHHHHHHHHHHHHSSCC-
T ss_pred             ----HH-HhHHhhcCCceec-cCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCCcCCHHHHHHHHHHHHCCCC-
Confidence                11 1222222333443 4567789999999999999999988655688999999989999999999999999876 


Q ss_pred             eeeecCCccccc-----CCCCcc---------cCCCcceeecHHhHHhhcCCCcccChHHHHHHHHhhh
Q 021331          233 ELVHYNPKEFDF-----GKKKAF---------PFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLD  287 (314)
Q Consensus       233 ~~~~~~~~~~~~-----~~~~~~---------~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~~  287 (314)
                      .+...+...+..     +.....         .........|++|+++.|||. .++++++|+++++|+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~-~~~~~e~l~~~~~~~  285 (286)
T 2zcu_A          218 TYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHP-TTTLAESVSHLFNVN  285 (286)
T ss_dssp             EEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTSC-CCCHHHHHHGGGC--
T ss_pred             ceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCcC-CCCHHHHHHHHHhhc
Confidence            666666543221     100000         001123556788999999974 459999999999875

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=6.6e-33  Score=242.08  Aligned_cols=266  Identities=12%  Similarity=0.049  Sum_probs=197.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh-ccCceEEE-EecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHL-KGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      ||||||||+++++.|+++|++|++++|+...... +.    ..+.. ...++.++ .+|++|++++.++++  ++|+|||
T Consensus        17 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vih   89 (342)
T 1y1p_A           17 TGANGFVASHVVEQLLEHGYKVRGTARSASKLAN-LQ----KRWDAKYPGRFETAVVEDMLKQGAYDEVIK--GAAGVAH   89 (342)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HH----HHHHHHSTTTEEEEECSCTTSTTTTTTTTT--TCSEEEE
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHH-HH----HHhhccCCCceEEEEecCCcChHHHHHHHc--CCCEEEE
Confidence            7999999999999999999999999997654211 00    00000 01468888 799999999999998  9999999


Q ss_pred             cCCCC-------------cccHHHHHHhCC---CCCcEEEEeeceeeccCCC----CCcc--------------------
Q 021331           79 INGRE-------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSDL----LPHC--------------------  118 (314)
Q Consensus        79 ~a~~~-------------~~~~~~~~~~~~---~~~~~i~~Ss~~v~~~~~~----~~~~--------------------  118 (314)
                      +|+..             ..++.+++++|.   ++++|||+||.++|+....    .++.                    
T Consensus        90 ~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~  169 (342)
T 1y1p_A           90 IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDP  169 (342)
T ss_dssp             CCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTST
T ss_pred             eCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcccccccc
Confidence            99863             345778888874   5789999999988853211    1111                    


Q ss_pred             ----CccccchhhHHHHHHhc------CCceEEEecCeeeCCCCCC----chhHHHHHHHHcCCCeecCCCCCceeeeee
Q 021331          119 ----ESRHKGKLNTESVLESK------GVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  184 (314)
Q Consensus       119 ----e~~~~~k~~~e~~~~~~------~~~~~ilR~~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  184 (314)
                          ..|+.+|..+|.+++..      +++++++||+.+|||....    ..+..++..+..+.+..+++.+ +.++++|
T Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~  248 (342)
T 1y1p_A          170 QKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-PPQYYVS  248 (342)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-CSEEEEE
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-CcCCEeE
Confidence                15899999999987542      6889999999999997532    2667777888888776554544 6789999


Q ss_pred             HHHHHHHHHHHhcCCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhH
Q 021331          185 VKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKA  264 (314)
Q Consensus       185 ~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~  264 (314)
                      ++|+|++++.++.++...+..+. .++..+|+.|+++.+.+.+|...  + ..+..          +.......+|++|+
T Consensus       249 v~Dva~a~~~~~~~~~~~g~~~~-~~g~~~s~~e~~~~i~~~~~~~~--~-~~~~~----------~~~~~~~~~d~~k~  314 (342)
T 1y1p_A          249 AVDIGLLHLGCLVLPQIERRRVY-GTAGTFDWNTVLATFRKLYPSKT--F-PADFP----------DQGQDLSKFDTAPS  314 (342)
T ss_dssp             HHHHHHHHHHHHHCTTCCSCEEE-ECCEEECHHHHHHHHHHHCTTSC--C-CCCCC----------CCCCCCCEECCHHH
T ss_pred             HHHHHHHHHHHHcCcccCCceEE-EeCCCCCHHHHHHHHHHHCCCcc--C-CCCCC----------ccccccccCChHHH
Confidence            99999999999987554455554 45567999999999999999641  1 11100          00112366799999


Q ss_pred             HhhcCC---CcccChHHHHHHHHhhhh
Q 021331          265 KHVLGW---KPEFDLVEGLADSYNLDF  288 (314)
Q Consensus       265 ~~~lg~---~~~~~~~~~l~~~~~~~~  288 (314)
                      ++.|||   .+.++++++|+++++|++
T Consensus       315 ~~~lg~~~~~~~~~l~~~l~~~~~~~~  341 (342)
T 1y1p_A          315 LEILKSLGRPGWRSIEESIKDLVGSET  341 (342)
T ss_dssp             HHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred             HHHHhhcccCCcCCHHHHHHHHHHHhh
Confidence            998887   466699999999999875

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=2.1e-32  Score=238.63  Aligned_cols=275  Identities=16%  Similarity=0.207  Sum_probs=191.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCccccc--CCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      |||+||||++|++.|+++|++|++++|+......  .+.     .+.....+++++.+|++|++++.++++  ++|+|||
T Consensus        11 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih   83 (337)
T 2c29_D           11 TGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLL-----DLPKAETHLTLWKADLADEGSFDEAIK--GCTGVFH   83 (337)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHH-----TSTTHHHHEEEEECCTTSTTTTHHHHT--TCSEEEE
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHH-----hcccCCCeEEEEEcCCCCHHHHHHHHc--CCCEEEE
Confidence            8999999999999999999999999998653110  000     000001368899999999999999998  8999999


Q ss_pred             cCCCC---------------cccHHHHHHhCC--C-CCcEEEEeece-eeccCCC-CCcc-----------------Ccc
Q 021331           79 INGRE---------------ADEVEPILDALP--N-LEQFIYCSSAG-VYLKSDL-LPHC-----------------ESR  121 (314)
Q Consensus        79 ~a~~~---------------~~~~~~~~~~~~--~-~~~~i~~Ss~~-v~~~~~~-~~~~-----------------e~~  121 (314)
                      +|+..               ..++.+++++|.  + ++||||+||.. +|+.... .+..                 ..|
T Consensus        84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  163 (337)
T 2c29_D           84 VATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMY  163 (337)
T ss_dssp             CCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred             eccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchH
Confidence            98742               234678888876  4 78999999987 4443211 1111                 148


Q ss_pred             ccchhhHHHHHH----hcCCceEEEecCeeeCCCCCCchhHHHHHH--HHcCCCeecCCCCCceeeeeeHHHHHHHHHHH
Q 021331          122 HKGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR--LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  195 (314)
Q Consensus       122 ~~~k~~~e~~~~----~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  195 (314)
                      +.+|..+|.++.    .++++++++||+.||||+....+...+...  ...+....+ +.. ....++|++|+|++++.+
T Consensus       164 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~-~~~-~~~~~i~v~Dva~a~~~~  241 (337)
T 2c29_D          164 FVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHY-SII-RQGQFVHLDDLCNAHIYL  241 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGH-HHH-TEEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccc-ccc-CCCCEEEHHHHHHHHHHH
Confidence            999999998763    468999999999999997543322221111  122332211 111 234599999999999999


Q ss_pred             hcCCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccC
Q 021331          196 LGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFD  275 (314)
Q Consensus       196 l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~  275 (314)
                      ++++.. ++.|++++ ..+|+.|+++.+.+.++...     .+..   +..   .+........|++|+ ++|||.|+++
T Consensus       242 ~~~~~~-~~~~~~~~-~~~s~~e~~~~i~~~~~~~~-----~~~~---~~~---~~~~~~~~~~d~~k~-~~lG~~p~~~  307 (337)
T 2c29_D          242 FENPKA-EGRYICSS-HDCIILDLAKMLREKYPEYN-----IPTE---FKG---VDENLKSVCFSSKKL-TDLGFEFKYS  307 (337)
T ss_dssp             HHCTTC-CEEEEECC-EEEEHHHHHHHHHHHCTTSC-----CCSC---CTT---CCTTCCCCEECCHHH-HHHTCCCCCC
T ss_pred             hcCccc-CceEEEeC-CCCCHHHHHHHHHHHCCCcc-----CCCC---CCc---ccCCCccccccHHHH-HHcCCCcCCC
Confidence            987543 45787765 45999999999999874211     1110   000   111234566899999 7899999999


Q ss_pred             hHHHHHHHHhhhhcCCCccCCCC
Q 021331          276 LVEGLADSYNLDFGRGTYRKEAD  298 (314)
Q Consensus       276 ~~~~l~~~~~~~~~~~~~~~~~~  298 (314)
                      ++++++++++|+.+.+..+....
T Consensus       308 l~e~l~~~~~~~~~~~~~~~~~~  330 (337)
T 2c29_D          308 LEDMFTGAVDTCRAKGLLPPSHE  330 (337)
T ss_dssp             HHHHHHHHHHHHHHTTSSCSCC-
T ss_pred             HHHHHHHHHHHHHHcCCCCcccc
Confidence            99999999999998887654433

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.5e-33  Score=239.40  Aligned_cols=252  Identities=21%  Similarity=0.262  Sum_probs=180.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|++.|+++||+|++++|++..                 ..   +..|    +.....+.  ++|+|||++
T Consensus         6 TGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-----------------~~---~~~~----~~~~~~l~--~~d~vihla   59 (298)
T 4b4o_A            6 GGGTGFIGTALTQLLNARGHEVTLVSRKPGP-----------------GR---ITWD----ELAASGLP--SCDAAVNLA   59 (298)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-----------------TE---EEHH----HHHHHCCC--SCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-----------------Ce---eecc----hhhHhhcc--CCCEEEEec
Confidence            7999999999999999999999999997644                 11   1122    22234455  899999998


Q ss_pred             CCCc--------------------ccHHHHHHhCC----CCCcEEEEeeceeeccCCCCCccC--------ccccchhhH
Q 021331           81 GREA--------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNT  128 (314)
Q Consensus        81 ~~~~--------------------~~~~~~~~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~  128 (314)
                      +...                    .+++++++++.    +..+||+.||.++|+.....+..|        .+...+...
T Consensus        60 ~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~  139 (298)
T 4b4o_A           60 GENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKW  139 (298)
T ss_dssp             CCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHH
T ss_pred             cCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHH
Confidence            7531                    23566777654    445689999999998766555544        123333333


Q ss_pred             HHH--HHhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceE
Q 021331          129 ESV--LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  206 (314)
Q Consensus       129 e~~--~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~  206 (314)
                      |..  ....+++++++||+.||||+.  ..+..+......+.... .+++++.++|||++|+|+++..+++++.. +++|
T Consensus       140 e~~~~~~~~~~~~~~~r~~~v~g~~~--~~~~~~~~~~~~~~~~~-~g~g~~~~~~ihv~Dva~a~~~~~~~~~~-~g~y  215 (298)
T 4b4o_A          140 EAAARLPGDSTRQVVVRSGVVLGRGG--GAMGHMLLPFRLGLGGP-IGSGHQFFPWIHIGDLAGILTHALEANHV-HGVL  215 (298)
T ss_dssp             HHHHCCSSSSSEEEEEEECEEECTTS--HHHHHHHHHHHTTCCCC-BTTSCSBCCEEEHHHHHHHHHHHHHCTTC-CEEE
T ss_pred             HHHHHhhccCCceeeeeeeeEEcCCC--CchhHHHHHHhcCCcce-ecccCceeecCcHHHHHHHHHHHHhCCCC-CCeE
Confidence            333  345678999999999999953  34555555555555443 48899999999999999999999998764 5699


Q ss_pred             EecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccc--cCCCCcccCCCcceeecHHhHHhhcCCCcccC-hHHHHHHH
Q 021331          207 NISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFD--FGKKKAFPFRDQHFFASVEKAKHVLGWKPEFD-LVEGLADS  283 (314)
Q Consensus       207 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~-~~~~l~~~  283 (314)
                      |+++++++|+.|+++.+++.+|++.  +.++|.+.++  +|..... .......+++.|++ ++||.+++| ++++|+++
T Consensus       216 n~~~~~~~t~~e~~~~ia~~lgrp~--~~pvP~~~~~~~~g~~~~~-~~l~~~rv~~~kl~-~~Gf~f~yp~l~~al~~l  291 (298)
T 4b4o_A          216 NGVAPSSATNAEFAQTFGAALGRRA--FIPLPSAVVQAVFGRQRAI-MLLEGQKVIPRRTL-ATGYQYSFPELGAALKEI  291 (298)
T ss_dssp             EESCSCCCBHHHHHHHHHHHHTCCC--CCCBCHHHHHHHHCHHHHH-HHHCCCCBCCHHHH-HTTCCCSCCSHHHHHHHH
T ss_pred             EEECCCccCHHHHHHHHHHHhCcCC--cccCCHHHHHHHhcchhHH-HhhCCCEEcHHHHH-HCCCCCCCCCHHHHHHHH
Confidence            9999999999999999999999764  2344443322  1211000 00122345678887 489999984 99999999


Q ss_pred             Hhh
Q 021331          284 YNL  286 (314)
Q Consensus       284 ~~~  286 (314)
                      ++.
T Consensus       292 ~~~  294 (298)
T 4b4o_A          292 AEN  294 (298)
T ss_dssp             HHC
T ss_pred             HHh
Confidence            874

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=6.2e-33  Score=241.99  Aligned_cols=271  Identities=20%  Similarity=0.244  Sum_probs=187.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|++.|+++|++|+++.|+.+.... ..  ....+. ...++.++.+|++|++++.++++  ++|+|||+|
T Consensus        15 TGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~-~~--~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~D~Vih~A   88 (338)
T 2rh8_A           15 VGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKK-VS--HLLELQ-ELGDLKIFRADLTDELSFEAPIA--GCDFVFHVA   88 (338)
T ss_dssp             ECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTT-TH--HHHHHG-GGSCEEEEECCTTTSSSSHHHHT--TCSEEEEES
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhh-HH--HHHhcC-CCCcEEEEecCCCChHHHHHHHc--CCCEEEEeC
Confidence            7999999999999999999999999987653210 00  000011 12468899999999999999998  899999998


Q ss_pred             CCC---------------cccHHHHHHhCC--C-CCcEEEEeece-eeccC--CC-CCccC-----------------cc
Q 021331           81 GRE---------------ADEVEPILDALP--N-LEQFIYCSSAG-VYLKS--DL-LPHCE-----------------SR  121 (314)
Q Consensus        81 ~~~---------------~~~~~~~~~~~~--~-~~~~i~~Ss~~-v~~~~--~~-~~~~e-----------------~~  121 (314)
                      +..               +.++.+++++|.  + ++||||+||.+ +|+..  .. .+.+|                 .|
T Consensus        89 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  168 (338)
T 2rh8_A           89 TPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGY  168 (338)
T ss_dssp             SCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCC
T ss_pred             CccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchH
Confidence            742               234678888876  3 78999999976 33211  00 01111                 49


Q ss_pred             ccchhhHHHHHH----hcCCceEEEecCeeeCCCCCCchhHH--HHHHHHcCCCeecCCC------CCceeeeeeHHHHH
Q 021331          122 HKGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEW--FFHRLKAGRPIPIPGS------GIQVTQLGHVKDLA  189 (314)
Q Consensus       122 ~~~k~~~e~~~~----~~~~~~~ilR~~~v~g~~~~~~~~~~--~~~~~~~~~~~~~~~~------~~~~~~~i~~~D~a  189 (314)
                      +.+|..+|.++.    +++++++++||+.||||+........  .+.....+....+ +.      +...++++|++|+|
T Consensus       169 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~i~v~Dva  247 (338)
T 2rh8_A          169 PASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLI-NGMKGMQMLSGSVSIAHVEDVC  247 (338)
T ss_dssp             TTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHH-HHHHHHHHHHSSEEEEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccc-ccccccccccCcccEEEHHHHH
Confidence            999999998774    35899999999999999753221111  1111223332211 11      01224899999999


Q ss_pred             HHHHHHhcCCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcC
Q 021331          190 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLG  269 (314)
Q Consensus       190 ~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg  269 (314)
                      ++++.+++++. .++.|+++++ .+|+.|+++.+.+.++...     .+..   +..   .+.. .....|++|+ ++||
T Consensus       248 ~a~~~~~~~~~-~~~~~~~~~~-~~s~~e~~~~l~~~~~~~~-----~~~~---~~~---~~~~-~~~~~d~~k~-~~lG  312 (338)
T 2rh8_A          248 RAHIFVAEKES-ASGRYICCAA-NTSVPELAKFLSKRYPQYK-----VPTD---FGD---FPPK-SKLIISSEKL-VKEG  312 (338)
T ss_dssp             HHHHHHHHCTT-CCEEEEECSE-EECHHHHHHHHHHHCTTSC-----CCCC---CTT---SCSS-CSCCCCCHHH-HHHT
T ss_pred             HHHHHHHcCCC-cCCcEEEecC-CCCHHHHHHHHHHhCCCCC-----CCCC---CCC---CCcC-cceeechHHH-HHhC
Confidence            99999998754 3567888765 5999999999999876311     1110   000   0111 1266899999 6699


Q ss_pred             CCcccChHHHHHHHHhhhhcCCCc
Q 021331          270 WKPEFDLVEGLADSYNLDFGRGTY  293 (314)
Q Consensus       270 ~~~~~~~~~~l~~~~~~~~~~~~~  293 (314)
                      |.|+++++++|+++++|+++.+..
T Consensus       313 ~~p~~~l~~gl~~~~~~~~~~~~~  336 (338)
T 2rh8_A          313 FSFKYGIEEIYDESVEYFKAKGLL  336 (338)
T ss_dssp             CCCSCCHHHHHHHHHHHHHHTTCC
T ss_pred             CCCCCCHHHHHHHHHHHHHHcCCC
Confidence            999999999999999999887654

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=6.7e-32  Score=233.84  Aligned_cols=270  Identities=17%  Similarity=0.197  Sum_probs=184.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEc-CCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      ||||||||+++++.|+++|++|++++| ++..... ...  ...+.....++.++.+|++|++++.++++  ++|+|||+
T Consensus         7 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~--~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~   81 (322)
T 2p4h_X            7 TGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRD-VSF--LTNLPGASEKLHFFNADLSNPDSFAAAIE--GCVGIFHT   81 (322)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEECCCC----CC-CHH--HHTSTTHHHHEEECCCCTTCGGGGHHHHT--TCSEEEEC
T ss_pred             ECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhH-HHH--HHhhhccCCceEEEecCCCCHHHHHHHHc--CCCEEEEc
Confidence            799999999999999999999999998 5422100 000  00000011357889999999999999998  89999999


Q ss_pred             CCCC---------------cccHHHHHHhCC---CCCcEEEEeeceee-ccCC-CCCcc---------------C--ccc
Q 021331           80 NGRE---------------ADEVEPILDALP---NLEQFIYCSSAGVY-LKSD-LLPHC---------------E--SRH  122 (314)
Q Consensus        80 a~~~---------------~~~~~~~~~~~~---~~~~~i~~Ss~~v~-~~~~-~~~~~---------------e--~~~  122 (314)
                      |+..               ..++.+++++|.   ++++|||+||.+++ +... ..++.               .  .|+
T Consensus        82 A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~  161 (322)
T 2p4h_X           82 ASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYA  161 (322)
T ss_dssp             CCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHH
T ss_pred             CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHH
Confidence            8641               234677888876   46899999997743 3211 11111               1  499


Q ss_pred             cchhhHHHHHH----hcCCceEEEecCeeeCCCCCCchhHHH--HHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          123 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWF--FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       123 ~~k~~~e~~~~----~~~~~~~ilR~~~v~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      .+|..+|.++.    .++++++++||+.||||+........+  +.....+....+ +.  ...+++|++|+|++++.++
T Consensus       162 ~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~-~~--~~~~~i~v~Dva~a~~~~~  238 (322)
T 2p4h_X          162 VSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQI-GV--TRFHMVHVDDVARAHIYLL  238 (322)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGC-CE--EEEEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccC-cC--CCcCEEEHHHHHHHHHHHh
Confidence            99999998764    368999999999999997532221111  112233443333 22  3348999999999999999


Q ss_pred             cCCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccCh
Q 021331          197 GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDL  276 (314)
Q Consensus       197 ~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~  276 (314)
                      +++...+ .|| .+++.+|+.|+++.+.+.++..  .   .+... .+..   .+.. ....+|++|+ ++|||.|++++
T Consensus       239 ~~~~~~g-~~~-~~~~~~s~~e~~~~i~~~~~~~--~---~~~~~-~~~~---~~~~-~~~~~d~~k~-~~lG~~p~~~~  305 (322)
T 2p4h_X          239 ENSVPGG-RYN-CSPFIVPIEEMSQLLSAKYPEY--Q---ILTVD-ELKE---IKGA-RLPDLNTKKL-VDAGFDFKYTI  305 (322)
T ss_dssp             HSCCCCE-EEE-CCCEEEEHHHHHHHHHHHCTTS--C---CCCTT-TTTT---CCCE-ECCEECCHHH-HHTTCCCCCCH
T ss_pred             hCcCCCC-CEE-EcCCCCCHHHHHHHHHHhCCCC--C---CCCCc-cccC---CCCC-cceecccHHH-HHhCCccCCCH
Confidence            8754334 588 5567899999999999887521  1   11110 0000   0111 3567899999 66999999999


Q ss_pred             HHHHHHHHhhhhcCC
Q 021331          277 VEGLADSYNLDFGRG  291 (314)
Q Consensus       277 ~~~l~~~~~~~~~~~  291 (314)
                      +++|+++++|+++++
T Consensus       306 ~~~l~~~~~~~~~~~  320 (322)
T 2p4h_X          306 EDMFDDAIQCCKEKG  320 (322)
T ss_dssp             HHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhcC
Confidence            999999999987655

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.98  E-value=2.6e-32  Score=250.63  Aligned_cols=257  Identities=14%  Similarity=0.096  Sum_probs=181.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|++.|+++|++|++++|+.....                   .+.+|+.+.  +.+++.  ++|+|||+|
T Consensus       153 TGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~-------------------~v~~d~~~~--~~~~l~--~~D~Vih~A  209 (516)
T 3oh8_A          153 TGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG-------------------KRFWDPLNP--ASDLLD--GADVLVHLA  209 (516)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT-------------------CEECCTTSC--CTTTTT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc-------------------ceeecccch--hHHhcC--CCCEEEECC
Confidence            799999999999999999999999999876521                   146677643  356666  899999999


Q ss_pred             CCC-----------------cccHHHHHHh-CC--CCCcEEEEeeceeec-cCCCCCccC-------ccccchhhHHHHH
Q 021331           81 GRE-----------------ADEVEPILDA-LP--NLEQFIYCSSAGVYL-KSDLLPHCE-------SRHKGKLNTESVL  132 (314)
Q Consensus        81 ~~~-----------------~~~~~~~~~~-~~--~~~~~i~~Ss~~v~~-~~~~~~~~e-------~~~~~k~~~e~~~  132 (314)
                      +..                 +.++.+++++ +.  ++++|||+||.++|+ .....++.|       .|+..|...|.++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~  289 (516)
T 3oh8_A          210 GEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHAT  289 (516)
T ss_dssp             CC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHHTT
T ss_pred             CCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHHHH
Confidence            862                 3457889988 43  778999999999998 322222222       3566666666554


Q ss_pred             ---HhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEec
Q 021331          133 ---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS  209 (314)
Q Consensus       133 ---~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~  209 (314)
                         ...+++++++||+.||||+.  .++..+...+..+... .++++++.++++|++|+|++++.++.++. .+++||++
T Consensus       290 ~~~~~~gi~~~ilRp~~v~Gp~~--~~~~~~~~~~~~g~~~-~~g~g~~~~~~i~v~Dva~ai~~~l~~~~-~~g~~ni~  365 (516)
T 3oh8_A          290 APASDAGKRVAFIRTGVALSGRG--GMLPLLKTLFSTGLGG-KFGDGTSWFSWIAIDDLTDIYYRAIVDAQ-ISGPINAV  365 (516)
T ss_dssp             HHHHHTTCEEEEEEECEEEBTTB--SHHHHHHHTTC---CC-CCTTSCCEECEEEHHHHHHHHHHHHHCTT-CCEEEEES
T ss_pred             HHHHhCCCCEEEEEeeEEECCCC--ChHHHHHHHHHhCCCc-ccCCCCceEceEeHHHHHHHHHHHHhCcc-cCCcEEEE
Confidence               46789999999999999963  4555555544444433 45788899999999999999999998865 45699999


Q ss_pred             CCccccHHHHHHHHHHHhCCCCCeeeecCCccccc--CCCCcccCCCcceeecHHhHHhhcCCCcccC-hHHHHHHHHhh
Q 021331          210 GEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDF--GKKKAFPFRDQHFFASVEKAKHVLGWKPEFD-LVEGLADSYNL  286 (314)
Q Consensus       210 ~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~-~~~~l~~~~~~  286 (314)
                      +++++|+.|+++.+.+.+|.+.  ...+|.+....  +.............++++|++ .|||.|+++ ++++|++++++
T Consensus       366 ~~~~~s~~el~~~i~~~~g~~~--~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~-~lG~~~~~~~l~e~l~~~l~~  442 (516)
T 3oh8_A          366 APNPVSNADMTKILATSMHRPA--FIQIPSLGPKILLGSQGAEELALASQRTAPAALE-NLSHTFRYTDIGAAIAHELGY  442 (516)
T ss_dssp             CSCCEEHHHHHHHTTC-----------------------CCGGGGGGCEEEECCHHHH-HTTCCCSCSSHHHHHHHHHTC
T ss_pred             CCCCCCHHHHHHHHHHHhCCCC--CCCCCHHHHHHHhCCchhHHHhhcCCeechHHHH-HCCCCCCCCCHHHHHHHHhCc
Confidence            9999999999999999999754  33344333221  211001222345667889998 599999997 99999999885


Q ss_pred             h
Q 021331          287 D  287 (314)
Q Consensus       287 ~  287 (314)
                      .
T Consensus       443 ~  443 (516)
T 3oh8_A          443 E  443 (516)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.98  E-value=3.3e-31  Score=224.17  Aligned_cols=241  Identities=18%  Similarity=0.128  Sum_probs=187.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||||++|+++++.|+ +|++|++++|+....                .+   +.+|++|++++.++++..++|+|||+|
T Consensus         6 tGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~----------------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a   65 (273)
T 2ggs_A            6 TGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ----------------GG---YKLDLTDFPRLEDFIIKKRPDVIINAA   65 (273)
T ss_dssp             ETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT----------------TC---EECCTTSHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCChhHHHHHHHHh-cCCeEEEecCCCcCC----------------CC---ceeccCCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999 589999999986420                12   789999999999999844599999999


Q ss_pred             CCCc----------------ccHHHHHHhCC-CCCcEEEEeeceeeccCCCCCcc--------CccccchhhHHHHHHhc
Q 021331           81 GREA----------------DEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHC--------ESRHKGKLNTESVLESK  135 (314)
Q Consensus        81 ~~~~----------------~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~--------e~~~~~k~~~e~~~~~~  135 (314)
                      +...                .++.++++++. ...+||++||.++|+.... ++.        ..|+.+|..+|.+++. 
T Consensus        66 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~~-~~~e~~~~~~~~~Y~~sK~~~e~~~~~-  143 (273)
T 2ggs_A           66 AMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKG-NYKEEDIPNPINYYGLSKLLGETFALQ-  143 (273)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSSC-SBCTTSCCCCSSHHHHHHHHHHHHHCC-
T ss_pred             cccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCCC-CcCCCCCCCCCCHHHHHHHHHHHHHhC-
Confidence            8642                34678888877 2249999999999975432 221        2699999999999987 


Q ss_pred             CCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCcccc
Q 021331          136 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  215 (314)
Q Consensus       136 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s  215 (314)
                       ++++++||+.+||+   ..+...++..+..+..+.++++   .+++++++|+|++++.++.++.  +++||+++ +.+|
T Consensus       144 -~~~~~iR~~~v~G~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~--~g~~~i~~-~~~s  213 (273)
T 2ggs_A          144 -DDSLIIRTSGIFRN---KGFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK--TGIIHVAG-ERIS  213 (273)
T ss_dssp             -TTCEEEEECCCBSS---SSHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC--CEEEECCC-CCEE
T ss_pred             -CCeEEEeccccccc---cHHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc--CCeEEECC-Cccc
Confidence             88999999999983   4455666666677777666443   7899999999999999998754  55999999 8999


Q ss_pred             HHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCc-ccChHHHH
Q 021331          216 FDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKP-EFDLVEGL  280 (314)
Q Consensus       216 ~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~-~~~~~~~l  280 (314)
                      +.|+++.+.+.+|.+.+.+......       ...+.......+|++|++++|||.| .+++++++
T Consensus       214 ~~e~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~~  272 (273)
T 2ggs_A          214 RFELALKIKEKFNLPGEVKEVDEVR-------GWIAKRPYDSSLDSSRARKILSTDFYTLDLDGMV  272 (273)
T ss_dssp             HHHHHHHHHHHTTCCSCEEEESSCT-------TCCSCCCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred             HHHHHHHHHHHhCCChhhccccccc-------ccccCCCcccccCHHHHHHHhCCCCCCccccccc
Confidence            9999999999999876332221110       0112233567789999999999999 57888764

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.97  E-value=3.2e-31  Score=226.19  Aligned_cols=255  Identities=15%  Similarity=0.158  Sum_probs=190.9

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      |||||++|+++++.|++. |++|++++|+++......           ..+++++.+|++|++++.++++  ++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~-----------~~~v~~~~~D~~d~~~l~~~~~--~~d~vi~~   72 (289)
T 3e48_A            6 TGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW-----------RGKVSVRQLDYFNQESMVEAFK--GMDTVVFI   72 (289)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG-----------BTTBEEEECCTTCHHHHHHHTT--TCSEEEEC
T ss_pred             EcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh-----------hCCCEEEEcCCCCHHHHHHHHh--CCCEEEEe
Confidence            799999999999999998 899999999877633211           2689999999999999999999  99999999


Q ss_pred             CCCC------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCceEEEecCeeeCCC
Q 021331           80 NGRE------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPL  151 (314)
Q Consensus        80 a~~~------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~~~ilR~~~v~g~~  151 (314)
                      ++..      ..++++++++|.  ++++||++||.+.   ....|+.  +......+|+.+++.+++++++||+.+||+ 
T Consensus        73 a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~---~~~~~~~--~~~~~~~~e~~~~~~g~~~~ilrp~~~~~~-  146 (289)
T 3e48_A           73 PSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYAD---QHNNPFH--MSPYFGYASRLLSTSGIDYTYVRMAMYMDP-  146 (289)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESCC---STTCCST--THHHHHHHHHHHHHHCCEEEEEEECEESTT-
T ss_pred             CCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccCC---CCCCCCc--cchhHHHHHHHHHHcCCCEEEEeccccccc-
Confidence            9864      356788999987  7889999999543   2223322  223345778888899999999999999997 


Q ss_pred             CCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCccccHHHHHHHHHHHhCCCC
Q 021331          152 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPE  231 (314)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  231 (314)
                          +... +..+...... +.+.++..+++++++|+|++++.++.++...+++|+++ ++.+|+.|+++.+.+.+|++.
T Consensus       147 ----~~~~-~~~~~~~~~~-~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~~~~s~~e~~~~~~~~~g~~~  219 (289)
T 3e48_A          147 ----LKPY-LPELMNMHKL-IYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS-GYSYDMKELAAILSEASGTEI  219 (289)
T ss_dssp             ----HHHH-HHHHHHHTEE-CCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC-CEEEEHHHHHHHHHHHHTSCC
T ss_pred             ----cHHH-HHHHHHCCCE-ecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC-CCcCCHHHHHHHHHHHHCCce
Confidence                2332 2333333333 33567888999999999999999999876568899999 999999999999999999875


Q ss_pred             CeeeecCCcccccCCCC-c-c---------cCCCcceeecHHhHHhhcCCCcccChHHHHHHH
Q 021331          232 PELVHYNPKEFDFGKKK-A-F---------PFRDQHFFASVEKAKHVLGWKPEFDLVEGLADS  283 (314)
Q Consensus       232 ~~~~~~~~~~~~~~~~~-~-~---------~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~  283 (314)
                       .+..++...+...... . .         .............+++.+|+.|+ ++++.+++.
T Consensus       220 -~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~-~~~~~~~~~  280 (289)
T 3e48_A          220 -KYEPVSLETFAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQLVNDQPQ-TLQSFLQEN  280 (289)
T ss_dssp             -EECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCCC-CHHHHHHC-
T ss_pred             -eEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHHhCCCCC-CHHHHHHHH
Confidence             6665554433211100 0 0         00112333455677888999998 898887763

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.97  E-value=2.7e-30  Score=226.04  Aligned_cols=278  Identities=13%  Similarity=0.120  Sum_probs=195.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      |||||++|++|++.|+++|++|++++|+.+......     ..+..+ ..+++++.+|+.|++++.+++++.++|+|||+
T Consensus        16 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~-----~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~   90 (346)
T 3i6i_A           16 AGATGFIGQFVATASLDAHRPTYILARPGPRSPSKA-----KIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVST   90 (346)
T ss_dssp             ECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHH-----HHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHH-----HHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEEC
Confidence            799999999999999999999999999873211000     000011 36899999999999999999988899999999


Q ss_pred             CCC-CcccHHHHHHhCC--C-CCcEEEEeeceeeccCC--CCCcc--CccccchhhHHHHHHhcCCceEEEecCeeeCCC
Q 021331           80 NGR-EADEVEPILDALP--N-LEQFIYCSSAGVYLKSD--LLPHC--ESRHKGKLNTESVLESKGVNWTSLRPVYIYGPL  151 (314)
Q Consensus        80 a~~-~~~~~~~~~~~~~--~-~~~~i~~Ss~~v~~~~~--~~~~~--e~~~~~k~~~e~~~~~~~~~~~ilR~~~v~g~~  151 (314)
                      ++. +..++.+++++|.  + +++||+ |   +||...  ..+..  ..|+.+|..+|+++++.+++++++||+.++|..
T Consensus        91 a~~~n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~~g~~~tivrpg~~~g~~  166 (346)
T 3i6i_A           91 VGGESILDQIALVKAMKAVGTIKRFLP-S---EFGHDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWP  166 (346)
T ss_dssp             CCGGGGGGHHHHHHHHHHHCCCSEEEC-S---CCSSCTTTCCCCTTHHHHHHHHHHHHHHHHHTTCCBEEEECCEESSCC
T ss_pred             CchhhHHHHHHHHHHHHHcCCceEEee-c---ccCCCCCccCcCCCcchHHHHHHHHHHHHHHcCCCEEEEEeccccccc
Confidence            986 7888999999998  6 888886 4   344321  11111  268899999999999999999999999999974


Q ss_pred             CCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecC-CccccHHHHHHHHHHHhCCC
Q 021331          152 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG-EKYVTFDGLARACAKAAGFP  230 (314)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~-~~~~s~~el~~~i~~~~g~~  230 (314)
                      ..... . .......+..+.++++++..+++++++|+|++++.++.++...+++|++.+ ++.+|+.|+++.+.+.+|.+
T Consensus       167 ~~~~~-~-~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~  244 (346)
T 3i6i_A          167 YYNNI-H-PSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRT  244 (346)
T ss_dssp             CSCC-------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTSC
T ss_pred             Ccccc-c-cccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCC
Confidence            32211 1 111112445677788999999999999999999999998776688999985 47899999999999999987


Q ss_pred             CCeeeecCCcccc-cCCCCccc--------------CCCcceee---cHHhHHhh-cCCCcccChHHHHHHHHhhhhcCC
Q 021331          231 EPELVHYNPKEFD-FGKKKAFP--------------FRDQHFFA---SVEKAKHV-LGWKPEFDLVEGLADSYNLDFGRG  291 (314)
Q Consensus       231 ~~~~~~~~~~~~~-~~~~~~~~--------------~~~~~~~~---~~~k~~~~-lg~~~~~~~~~~l~~~~~~~~~~~  291 (314)
                      . .+...+...+. .......+              .....+.+   +..++.+. .+++++ ++++.++++++|+..+.
T Consensus       245 ~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~t-~~~e~l~~~~~~~~~~~  322 (346)
T 3i6i_A          245 L-PRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPEDSFR-TVEECFGEYIVKMEEKQ  322 (346)
T ss_dssp             C-CEEEECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTTSSCCCSTTEEEHHHHSTTCCCC-CHHHHHHHHHCC-----
T ss_pred             C-ceEecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCcccccCCCCcccHHHhCCCCCcC-cHHHHHHHHHHHhhccc
Confidence            6 56555544331 11000000              00000111   01122232 356665 89999999999977644

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.97  E-value=1.6e-30  Score=233.75  Aligned_cols=280  Identities=15%  Similarity=0.104  Sum_probs=198.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccc--cCCCCCCch-----hhhhccCceEEEEecCCChhhHHHhhhcCCc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA--QQLPGESDQ-----EFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~   73 (314)
                      |||||+||++|+++|++.|++|++++|+.....  ..+......     .......++.++.+|++|++.+. .+.  ++
T Consensus        75 TGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~~--~~  151 (427)
T 4f6c_A           75 TGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LPE--NM  151 (427)
T ss_dssp             ECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-CSS--CC
T ss_pred             ecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-CcC--CC
Confidence            799999999999999999999999999987210  000000000     00111368999999999988887 555  89


Q ss_pred             cEEEEcCCC-------------CcccHHHHHHhCC-CCCcEEEEeeceeeccC-----CCCC-----------ccCcccc
Q 021331           74 DVVYDINGR-------------EADEVEPILDALP-NLEQFIYCSSAGVYLKS-----DLLP-----------HCESRHK  123 (314)
Q Consensus        74 d~vi~~a~~-------------~~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~-----~~~~-----------~~e~~~~  123 (314)
                      |+|||+|+.             |+.++.+++++|. ++++|||+||.++ |..     ...+           ....|+.
T Consensus       152 d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~  230 (427)
T 4f6c_A          152 DTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPYTR  230 (427)
T ss_dssp             SEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSCCCCSHHHH
T ss_pred             CEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccCCCCCccccccccccCCCCCCchHH
Confidence            999999986             3446788999888 7889999999888 431     0111           2226999


Q ss_pred             chhhHHHHHHh---cCCceEEEecCeeeCCCCCC--------chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHH
Q 021331          124 GKLNTESVLES---KGVNWTSLRPVYIYGPLNYN--------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  192 (314)
Q Consensus       124 ~k~~~e~~~~~---~~~~~~ilR~~~v~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  192 (314)
                      +|+.+|.++++   .+++++++||+.||||....        .++..++........++. +.++..+++++++|+|+++
T Consensus       231 sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~DvA~ai  309 (427)
T 4f6c_A          231 SKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQI  309 (427)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccccceEEEeeHHHHHHHH
Confidence            99999999875   78999999999999997543        235567777777776665 3457889999999999999


Q ss_pred             HHHhcCCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCC---CCc-----ccCCCcceeecHHhH
Q 021331          193 VQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGK---KKA-----FPFRDQHFFASVEKA  264 (314)
Q Consensus       193 ~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~k~  264 (314)
                      +.++.++. .+++||+++++++++.|+++.+.+ +|  . .....+.+...+..   ...     .........+|+.+.
T Consensus       310 ~~~~~~~~-~g~~~~l~~~~~~s~~el~~~i~~-~g--~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~  384 (427)
T 4f6c_A          310 VALAQVNT-PQIIYHVLSPNKMPVKSLLECVKR-KE--I-ELVSDESFNEILQKQDMYETIGLTSVDREQQLAMIDTTLT  384 (427)
T ss_dssp             HHHTTSCC-CCSEEEESCSCCEEHHHHHHHHHS-SC--C-EEECHHHHHHHHHHTTCHHHHHHHHHHHTSEECEECCHHH
T ss_pred             HHHHcCCC-CCCEEEecCCCCCcHHHHHHHHHH-cC--C-cccCHHHHHHHHHhcCchhhhhhhhccccCCceeccHHHH
Confidence            99998876 789999999999999999999998 66  2 33333322111100   000     000123455676666


Q ss_pred             H---hhcCCCcccChHHHHHHHHhhhhcC
Q 021331          265 K---HVLGWKPEFDLVEGLADSYNLDFGR  290 (314)
Q Consensus       265 ~---~~lg~~~~~~~~~~l~~~~~~~~~~  290 (314)
                      .   +.+||.++...++.++++++++.+.
T Consensus       385 ~~~l~~~G~~~~~~~~~~l~~~~~~l~~~  413 (427)
T 4f6c_A          385 LKIMNHISEKWPTITNNWLYHWAQYIKTI  413 (427)
T ss_dssp             HHHHHHTTCCCCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence            5   5579988855566888888877664

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.97  E-value=1.8e-30  Score=238.34  Aligned_cols=280  Identities=15%  Similarity=0.109  Sum_probs=200.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCccccc--CCCCCCch-----hhhhccCceEEEEecCCChhhHHHhhhcCCc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--QLPGESDQ-----EFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~   73 (314)
                      ||||||||++|+++|.+.|++|++++|+......  .+......     .......++.++.+|+.|++.+. ++.  ++
T Consensus       156 TGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~~--~~  232 (508)
T 4f6l_B          156 TGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LPE--NM  232 (508)
T ss_dssp             SCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-CSS--CC
T ss_pred             ECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-Ccc--CC
Confidence            7999999999999998889999999998773100  00000000     00111368999999999988777 555  89


Q ss_pred             cEEEEcCCC-------------CcccHHHHHHhCC-CCCcEEEEeeceeeccC-----CCCCc-----------cCcccc
Q 021331           74 DVVYDINGR-------------EADEVEPILDALP-NLEQFIYCSSAGVYLKS-----DLLPH-----------CESRHK  123 (314)
Q Consensus        74 d~vi~~a~~-------------~~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~-----~~~~~-----------~e~~~~  123 (314)
                      |+|||+|+.             |+.++.+++++|. +.++|||+||.++ |..     ...++           ...|+.
T Consensus       233 D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~  311 (508)
T 4f6l_B          233 DTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPYTR  311 (508)
T ss_dssp             SEEEECCCC--------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSSBCCCSHHHH
T ss_pred             CEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhh-ccCCccCCcCcccccccccccccCCCcHHH
Confidence            999999986             3456889999988 7789999999988 321     11111           126999


Q ss_pred             chhhHHHHHHh---cCCceEEEecCeeeCCCCCCc--------hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHH
Q 021331          124 GKLNTESVLES---KGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  192 (314)
Q Consensus       124 ~k~~~e~~~~~---~~~~~~ilR~~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  192 (314)
                      +|+.+|+++++   .|++++++||+.|||+.....        .+..++........++. +.++..+++++++|+|+++
T Consensus       312 sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~~~~~v~v~DvA~ai  390 (508)
T 4f6l_B          312 SKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQI  390 (508)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGGSEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccCceEEEEcHHHHHHHH
Confidence            99999999865   789999999999999964332        35566666666666655 4467889999999999999


Q ss_pred             HHHhcCCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCC---C-----cccCCCcceeecHHhH
Q 021331          193 VQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKK---K-----AFPFRDQHFFASVEKA  264 (314)
Q Consensus       193 ~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~---~-----~~~~~~~~~~~~~~k~  264 (314)
                      +.++.++. .+++||+++++++|+.|+++.+.+..   . ...+.+.+...+...   .     ..........+|+.+.
T Consensus       391 ~~~~~~~~-~~~~~nl~~~~~~s~~el~~~i~~~~---~-~~~~~~~w~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~  465 (508)
T 4f6l_B          391 VALAQVNT-PQIIYHVLSPNKMPVKSLLECVKRKE---I-ELVSDESFNEILQKQDMYETIGLTSVDREQQLAMIDTTLT  465 (508)
T ss_dssp             HHHTTBCC-SCSEEEESCSCEEEHHHHHHHHHSSC---C-EEECHHHHHHHHHTTCCHHHHHHHHTGGGSEECEECCHHH
T ss_pred             HHHHhCCC-CCCEEEeCCCCCCCHHHHHHHHHHcC---C-cccCHHHHHHHHHhcCCccchhcccccccCcceecchHHH
Confidence            99998876 78999999999999999999999854   2 333333222111100   0     0011223555666665


Q ss_pred             H---hhcCCCcccChHHHHHHHHhhhhcC
Q 021331          265 K---HVLGWKPEFDLVEGLADSYNLDFGR  290 (314)
Q Consensus       265 ~---~~lg~~~~~~~~~~l~~~~~~~~~~  290 (314)
                      .   +.+||.++...++.++++++|+.+.
T Consensus       466 ~~~l~~~G~~~~~~~~~~l~~~~~~~~~~  494 (508)
T 4f6l_B          466 LKIMNHISEKWPTITNNWLYHWAQYIKTI  494 (508)
T ss_dssp             HHHHHHHSCCCCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCHHHHHHHHHHHHHH
Confidence            4   4579988866688888888877663

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.96  E-value=1.9e-29  Score=222.62  Aligned_cols=228  Identities=16%  Similarity=0.145  Sum_probs=182.4

Q ss_pred             CCcccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      ||||||+|++|++.|+++|+ +|++++|+                              .|++++.++++  ++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~g~~~v~~~d~~------------------------------~d~~~l~~~~~--~~d~Vih~   53 (369)
T 3st7_A            6 TGAKGFVGKNLKADLTSTTDHHIFEVHRQ------------------------------TKEEELESALL--KADFIVHL   53 (369)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCEEEECCTT------------------------------CCHHHHHHHHH--HCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEECCC------------------------------CCHHHHHHHhc--cCCEEEEC
Confidence            79999999999999999998 77776654                              47888999998  89999999


Q ss_pred             CCC------------CcccHHHHHHhCC--CCC-cEEEEeeceeeccCCCCCccCccccchhhHHHHHHh----cCCceE
Q 021331           80 NGR------------EADEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLES----KGVNWT  140 (314)
Q Consensus        80 a~~------------~~~~~~~~~~~~~--~~~-~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~----~~~~~~  140 (314)
                      |+.            |..++.++++++.  +++ +|||+||.++|+       ...|+.+|..+|+++++    .+++++
T Consensus        54 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~-------~~~Y~~sK~~~E~~~~~~~~~~g~~~~  126 (369)
T 3st7_A           54 AGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ-------DNPYGESKLQGEQLLREYAEEYGNTVY  126 (369)
T ss_dssp             CCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS-------CSHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred             CcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC-------CCCchHHHHHHHHHHHHHHHHhCCCEE
Confidence            985            4566899999988  555 899999999987       22599999999999865    789999


Q ss_pred             EEecCeeeCCCCC---CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccC-CceEEecCCccccH
Q 021331          141 SLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS-RQVFNISGEKYVTF  216 (314)
Q Consensus       141 ilR~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~-~~~~~i~~~~~~s~  216 (314)
                      ++||+.+|||+..   ..++..++..+..+.++.+ ++++..++++|++|+|++++.++.++... +++||+++++.+|+
T Consensus       127 i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s~  205 (369)
T 3st7_A          127 IYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTL  205 (369)
T ss_dssp             EEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSCCEEEEH
T ss_pred             EEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCCCCceeH
Confidence            9999999999753   3577888888888887776 47788999999999999999999987643 78999999999999


Q ss_pred             HHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHh
Q 021331          217 DGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYN  285 (314)
Q Consensus       217 ~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~  285 (314)
                      .|+++.+.+.+|.+. .+...+..              .  ..........+||.|+.++..+++...+
T Consensus       206 ~e~~~~~~~~~g~~~-~~~~~~~~--------------~--~~~~~l~~~~l~~~p~~~~~~~l~~~~D  257 (369)
T 3st7_A          206 GEIVDLLYKFKQSRL-DRTLPKLD--------------N--LFEKDLYSTYLSYLPSTDFSYPLLMNVD  257 (369)
T ss_dssp             HHHHHHHHHHHHHHH-HTCCCCTT--------------S--HHHHHHHHHHHHTSCTTCSCCCCCEEEE
T ss_pred             HHHHHHHHHHhCCCc-ccccCCCC--------------C--HHHHHHHHHHhcccCCcceeechhhccC
Confidence            999999999999653 11111100              0  0112334445899998877776655433

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.96  E-value=2.4e-29  Score=207.01  Aligned_cols=195  Identities=20%  Similarity=0.182  Sum_probs=152.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||||++|+++++.|+++|++|++++|+++.... +           ..+++++.+|++|++++.++++  ++|+|||++
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a   75 (227)
T 3dhn_A           10 IGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI-E-----------NEHLKVKKADVSSLDEVCEVCK--GADAVISAF   75 (227)
T ss_dssp             ETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC-C-----------CTTEEEECCCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh-c-----------cCceEEEEecCCCHHHHHHHhc--CCCEEEEeC
Confidence            7999999999999999999999999999766321 2           1579999999999999999999  999999999


Q ss_pred             CCC----------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCC-----Cc--cCccccchhhHHHHH---H-hcCC
Q 021331           81 GRE----------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLL-----PH--CESRHKGKLNTESVL---E-SKGV  137 (314)
Q Consensus        81 ~~~----------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~-----~~--~e~~~~~k~~~e~~~---~-~~~~  137 (314)
                      +..          ..++.++++++.  ++++||++||.++|......     +.  ...|+.+|..+|.++   . +.++
T Consensus        76 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~  155 (227)
T 3dhn_A           76 NPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEI  155 (227)
T ss_dssp             CC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGGCCSS
T ss_pred             cCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhccCc
Confidence            873          556889999987  77899999998876433211     11  126899999999554   3 5689


Q ss_pred             ceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCccccHH
Q 021331          138 NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD  217 (314)
Q Consensus       138 ~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s~~  217 (314)
                      +++++||+.+|||+.....+       ..+....+.. ++. ++++|++|+|++++.+++++...+++|+++++++.++.
T Consensus       156 ~~~ilrp~~v~g~~~~~~~~-------~~~~~~~~~~-~~~-~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~~~  226 (227)
T 3dhn_A          156 DWVFFSPAADMRPGVRTGRY-------RLGKDDMIVD-IVG-NSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHHHHH  226 (227)
T ss_dssp             EEEEEECCSEEESCCCCCCC-------EEESSBCCCC-TTS-CCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSCCC--
T ss_pred             cEEEEeCCcccCCCccccce-------eecCCCcccC-CCC-CcEEeHHHHHHHHHHHHhCccccCcEEEEEeehhcccC
Confidence            99999999999997543221       1222223322 222 79999999999999999998888999999999998875


Q ss_pred             H
Q 021331          218 G  218 (314)
Q Consensus       218 e  218 (314)
                      +
T Consensus       227 ~  227 (227)
T 3dhn_A          227 H  227 (227)
T ss_dssp             -
T ss_pred             C
Confidence            3

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.96  E-value=2.6e-28  Score=221.97  Aligned_cols=236  Identities=16%  Similarity=0.181  Sum_probs=174.2

Q ss_pred             CCcccccHHHHHHHHHHC---CCeEEEEEcCCcccc------cCCCCCCc---hhh-hhccCceEEEEecCC------Ch
Q 021331            1 MGGTRFIGVFLSRLLVKE---GHQVTLFTRGKAPIA------QQLPGESD---QEF-AEFSSKILHLKGDRK------DY   61 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~------~~~~~~~~---~~~-~~~~~~~~~~~~D~~------d~   61 (314)
                      ||||||||++|+++|+++   |++|++++|+.....      ..+.....   ..+ .....++.++.+|++      |.
T Consensus        79 TGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~~~gld~  158 (478)
T 4dqv_A           79 TGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQ  158 (478)
T ss_dssp             ECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSGGGGCCH
T ss_pred             ECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCcccCCCH
Confidence            799999999999999999   899999999876421      01100000   000 001258999999998      66


Q ss_pred             hhHHHhhhcCCccEEEEcCCC------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------
Q 021331           62 DFVKSSLSAKGFDVVYDINGR------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------  119 (314)
Q Consensus        62 ~~l~~~~~~~~~d~vi~~a~~------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------  119 (314)
                      +.+.++++  ++|+|||+|+.            |+.++.+++++|.  ++++|||+||.++|+.....++.|        
T Consensus       159 ~~~~~~~~--~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~  236 (478)
T 4dqv_A          159 PMWRRLAE--TVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVIS  236 (478)
T ss_dssp             HHHHHHHH--HCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSSSCHHHHC
T ss_pred             HHHHHHHc--CCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCcccccccC
Confidence            78899998  89999999986            3456889999987  778999999999998654444443        


Q ss_pred             -----------ccccchhhHHHHHHh----cCCceEEEecCeeeCCCCC------CchhHHHHHHHHcCCCee--cCCC-
Q 021331          120 -----------SRHKGKLNTESVLES----KGVNWTSLRPVYIYGPLNY------NPVEEWFFHRLKAGRPIP--IPGS-  175 (314)
Q Consensus       120 -----------~~~~~k~~~e~~~~~----~~~~~~ilR~~~v~g~~~~------~~~~~~~~~~~~~~~~~~--~~~~-  175 (314)
                                 .|+.+|+.+|.++++    .+++++++||+.|||+...      ..++..++.........+  +++. 
T Consensus       237 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~  316 (478)
T 4dqv_A          237 PTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPD  316 (478)
T ss_dssp             CEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCC
T ss_pred             cccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccc
Confidence                       299999999999865    4899999999999998431      224444444443322222  1111 


Q ss_pred             -----CCceeeeeeHHHHHHHHHHHhcC----CccCCceEEecCCcc--ccHHHHHHHHHHHhCCCCCeeeecCC
Q 021331          176 -----GIQVTQLGHVKDLARAFVQVLGN----EKASRQVFNISGEKY--VTFDGLARACAKAAGFPEPELVHYNP  239 (314)
Q Consensus       176 -----~~~~~~~i~~~D~a~~~~~~l~~----~~~~~~~~~i~~~~~--~s~~el~~~i~~~~g~~~~~~~~~~~  239 (314)
                           ++..++++|++|+|++++.++.+    +...+++||++++++  +|+.|+++.+.+. |.+.+.+..++.
T Consensus       317 ~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~~~~~i~~~~~  390 (478)
T 4dqv_A          317 SEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-GYPIRRIDDFAE  390 (478)
T ss_dssp             TTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-TCSCEEESSHHH
T ss_pred             cccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-CCCcccCCCHHH
Confidence                 25678999999999999999876    444678999999988  9999999999995 776534334443

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.96  E-value=3.4e-29  Score=214.63  Aligned_cols=262  Identities=19%  Similarity=0.175  Sum_probs=189.3

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      |||||++|+++++.|+++| ++|++++|++.....       ..+.  ..+++++.+|+.|++++.++++  ++|+|||+
T Consensus        11 tGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~-------~~l~--~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~   79 (299)
T 2wm3_A           11 FGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA-------KELR--LQGAEVVQGDQDDQVIMELALN--GAYATFIV   79 (299)
T ss_dssp             ETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH-------HHHH--HTTCEEEECCTTCHHHHHHHHT--TCSEEEEC
T ss_pred             ECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH-------HHHH--HCCCEEEEecCCCHHHHHHHHh--cCCEEEEe
Confidence            7999999999999999998 999999998754210       0000  2578999999999999999998  89999999


Q ss_pred             CCCC--------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCceEEEecCeeeC
Q 021331           80 NGRE--------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYG  149 (314)
Q Consensus        80 a~~~--------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~~~ilR~~~v~g  149 (314)
                      ++..        ...+++++++|.  ++++||++|+.++++.....+ ...|..+|..+|+++++++++++++||+.+||
T Consensus        80 a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~-~~~y~~sK~~~e~~~~~~gi~~~ilrp~~~~~  158 (299)
T 2wm3_A           80 TNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRL-AAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFE  158 (299)
T ss_dssp             CCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTSC-CCHHHHHHHHHHHHHHHHTCCEEEEECCEEGG
T ss_pred             CCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCCcc-cCchhhHHHHHHHHHHHCCCCEEEEeecHHhh
Confidence            9742        335778899887  889999988888876543222 23588999999999999999999999999999


Q ss_pred             CCCCCchhHHHHHH-HHcCCC--eecCCCCCceeeeeeHHHHHHHHHHHhcCCc-cCCceEEecCCccccHHHHHHHHHH
Q 021331          150 PLNYNPVEEWFFHR-LKAGRP--IPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGEKYVTFDGLARACAK  225 (314)
Q Consensus       150 ~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-~~~~~~~i~~~~~~s~~el~~~i~~  225 (314)
                      +...     .+... ...+..  +.+ ..++..+++++++|+|++++.++.++. ..+++|++++ +.+|+.|+++.+.+
T Consensus       159 ~~~~-----~~~~~~~~~g~~~~~~~-~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g-~~~s~~e~~~~~~~  231 (299)
T 2wm3_A          159 NLLS-----HFLPQKAPDGKSYLLSL-PTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST-CRHTAEEYAALLTK  231 (299)
T ss_dssp             GGGT-----TTCCEECTTSSSEEECC-CCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS-EEECHHHHHHHHHH
T ss_pred             hchh-----hcCCcccCCCCEEEEEe-cCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee-ccCCHHHHHHHHHH
Confidence            7321     01111 112222  223 236778999999999999999998752 3578999987 57999999999999


Q ss_pred             HhCCCCCeeeecCCccccc-CCCC---c---ccCCCcceeecHHhHHhhcCCCcccChHHHHHHHH
Q 021331          226 AAGFPEPELVHYNPKEFDF-GKKK---A---FPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSY  284 (314)
Q Consensus       226 ~~g~~~~~~~~~~~~~~~~-~~~~---~---~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~  284 (314)
                      .+|++. .+...+.+.+.. +...   .   ..........+ ....+.+|..|+ +|++.+++..
T Consensus       232 ~~g~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~-~~~~~~~~~~  294 (299)
T 2wm3_A          232 HTRKVV-HDAKMTPEDYEKLGFPGARDLANMFRFYALRPDRD-IELTLRLNPKAL-TLDQWLEQHK  294 (299)
T ss_dssp             HHSSCE-EECCCCTHHHHTTCSTTHHHHHHHHHHHTTCCCCC-HHHHHHHCTTCC-CHHHHHHHHG
T ss_pred             HHCCCc-eeEecCHHHHHhcCCCcHHHHHHHHHHHHhcCCCC-HHHHHHhCCCCC-CHHHHHHhCh
Confidence            999875 666666554321 1100   0   00000111112 234556788776 8999888764

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.95  E-value=2.3e-28  Score=213.76  Aligned_cols=224  Identities=15%  Similarity=0.135  Sum_probs=169.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccc-cCCCCCCchhhhhccCceEEEEec-CCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGD-RKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D-~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      |||||++|++|++.|+++|++|++++|+.+... ..+        .. ..+++++.+| ++|++++.++++  ++|+|||
T Consensus        11 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l--------~~-~~~v~~v~~D~l~d~~~l~~~~~--~~d~Vi~   79 (352)
T 1xgk_A           11 VGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEEL--------QA-IPNVTLFQGPLLNNVPLMDTLFE--GAHLAFI   79 (352)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHH--------HT-STTEEEEESCCTTCHHHHHHHHT--TCSEEEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHH--------hh-cCCcEEEECCccCCHHHHHHHHh--cCCEEEE
Confidence            799999999999999999999999999876521 001        00 1478899999 999999999998  8999999


Q ss_pred             cCCCC----cccHHHHHHhCC--C-CCcEEEEeece--eeccCCCCCccCccccchhhHHHHHHhcCCceEEEecCeeeC
Q 021331           79 INGRE----ADEVEPILDALP--N-LEQFIYCSSAG--VYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYG  149 (314)
Q Consensus        79 ~a~~~----~~~~~~~~~~~~--~-~~~~i~~Ss~~--v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~~~ilR~~~v~g  149 (314)
                      +++..    ....++++++|.  + +++|||+||.+  .|+...    ...|..+|..+|+++++.+++++++||+ +||
T Consensus        80 ~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~----~~~y~~sK~~~E~~~~~~gi~~~ivrpg-~~g  154 (352)
T 1xgk_A           80 NTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWP----AVPMWAPKFTVENYVRQLGLPSTFVYAG-IYN  154 (352)
T ss_dssp             CCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCC----CCTTTHHHHHHHHHHHTSSSCEEEEEEC-EEG
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccCCCC----CccHHHHHHHHHHHHHHcCCCEEEEecc-eec
Confidence            88653    223488898887  6 89999999975  444321    1258899999999999999999999986 688


Q ss_pred             CCCCCchhHHHHHH-HHcCCC-eecCCCCCceeeeeeH-HHHHHHHHHHhcCCc--cCCceEEecCCccccHHHHHHHHH
Q 021331          150 PLNYNPVEEWFFHR-LKAGRP-IPIPGSGIQVTQLGHV-KDLARAFVQVLGNEK--ASRQVFNISGEKYVTFDGLARACA  224 (314)
Q Consensus       150 ~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~i~~-~D~a~~~~~~l~~~~--~~~~~~~i~~~~~~s~~el~~~i~  224 (314)
                      ++....+...+... ...+.. +.++++++..++++|+ +|+|++++.++.++.  ..+++|++++ +.+|+.|+++.+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~-~~~s~~e~~~~i~  233 (352)
T 1xgk_A          155 NNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAFS  233 (352)
T ss_dssp             GGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHHHH
T ss_pred             CCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEec-CCCCHHHHHHHHH
Confidence            75432211100000 112222 2346677888999999 899999999998752  2578999996 6699999999999


Q ss_pred             HHhCCCCCeeeecCCccc
Q 021331          225 KAAGFPEPELVHYNPKEF  242 (314)
Q Consensus       225 ~~~g~~~~~~~~~~~~~~  242 (314)
                      +.+|++. .+..+|.+.+
T Consensus       234 ~~~G~~~-~~~~vp~~~~  250 (352)
T 1xgk_A          234 RALNRRV-TYVQVPKVEI  250 (352)
T ss_dssp             HHHTSCE-EEEECSSCCC
T ss_pred             HHHCCCC-ceEECCHHHH
Confidence            9999876 6667775544

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.95  E-value=1.1e-27  Score=208.95  Aligned_cols=208  Identities=16%  Similarity=0.208  Sum_probs=168.6

Q ss_pred             CCcccccHHHHHHHHHHC-CC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE-GH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      |||||++|++++++|+++ |+ +|++++|+..+......     .+.  ..++.++.+|++|++.+.++++  ++|+|||
T Consensus        27 TGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~-----~~~--~~~v~~~~~Dl~d~~~l~~~~~--~~D~Vih   97 (344)
T 2gn4_A           27 TGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAM-----EFN--DPRMRFFIGDVRDLERLNYALE--GVDICIH   97 (344)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHH-----HHC--CTTEEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHH-----Hhc--CCCEEEEECCCCCHHHHHHHHh--cCCEEEE
Confidence            799999999999999999 97 99999998654211000     000  1578999999999999999998  9999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHh------
Q 021331           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLES------  134 (314)
Q Consensus        79 ~a~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~------  134 (314)
                      +|+..                ..++.++++++.  ++++||++||..++..     . ..|+.+|..+|.+++.      
T Consensus        98 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p-----~-~~Y~~sK~~~E~~~~~~~~~~~  171 (344)
T 2gn4_A           98 AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANP-----I-NLYGATKLCSDKLFVSANNFKG  171 (344)
T ss_dssp             CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSC-----C-SHHHHHHHHHHHHHHHGGGCCC
T ss_pred             CCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCC-----c-cHHHHHHHHHHHHHHHHHHHhC
Confidence            99863                234678888887  7889999999776532     1 2699999999999864      


Q ss_pred             -cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCC-CeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCc
Q 021331          135 -KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK  212 (314)
Q Consensus       135 -~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~  212 (314)
                       .+++++++||++|||++.  .+++.+...+..+. ++.+. +++..++++|++|+|++++.++.++. .+++|++.++ 
T Consensus       172 ~~g~~~~~vRpg~v~g~~~--~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~v~~~l~~~~-~g~~~~~~~~-  246 (344)
T 2gn4_A          172 SSQTQFSVVRYGNVVGSRG--SVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSFVLKSLKRMH-GGEIFVPKIP-  246 (344)
T ss_dssp             SSCCEEEEECCCEETTCTT--SHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHHHHHHHHHCC-SSCEEEECCC-
T ss_pred             CCCcEEEEEEeccEECCCC--CHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHHHHHHHhhcc-CCCEEecCCC-
Confidence             469999999999999863  46677778888887 77774 67778999999999999999998754 5789999877 


Q ss_pred             cccHHHHHHHHHHHhC
Q 021331          213 YVTFDGLARACAKAAG  228 (314)
Q Consensus       213 ~~s~~el~~~i~~~~g  228 (314)
                      .+|+.|+++.+.+.++
T Consensus       247 ~~s~~el~~~i~~~~~  262 (344)
T 2gn4_A          247 SMKMTDLAKALAPNTP  262 (344)
T ss_dssp             EEEHHHHHHHHCTTCC
T ss_pred             cEEHHHHHHHHHHhCC
Confidence            5999999999986543

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.95  E-value=7.3e-28  Score=197.02  Aligned_cols=189  Identities=14%  Similarity=0.176  Sum_probs=156.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCC-hhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~l~~~~~~~~~d~vi~~   79 (314)
                      |||||++|+++++.|+++|++|++++|+.+....             ..+++++.+|++| ++++.++++  ++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------------~~~~~~~~~D~~d~~~~~~~~~~--~~d~vi~~   70 (219)
T 3dqp_A            6 VGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ-------------YNNVKAVHFDVDWTPEEMAKQLH--GMDAIINV   70 (219)
T ss_dssp             ESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC-------------CTTEEEEECCTTSCHHHHHTTTT--TCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh-------------cCCceEEEecccCCHHHHHHHHc--CCCEEEEC
Confidence            7999999999999999999999999999765321             1579999999999 999999998  99999999


Q ss_pred             CCC--------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCC----ccCccccchhhHHHHH-HhcCCceEEEec
Q 021331           80 NGR--------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLP----HCESRHKGKLNTESVL-ESKGVNWTSLRP  144 (314)
Q Consensus        80 a~~--------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~----~~e~~~~~k~~~e~~~-~~~~~~~~ilR~  144 (314)
                      ++.        |..++.+++++|.  ++++||++||.++++......    ....|+.+|..+|+++ +..+++++++||
T Consensus        71 ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~ilrp  150 (219)
T 3dqp_A           71 SGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQP  150 (219)
T ss_dssp             CCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHHHSCCCEEEEEEE
T ss_pred             CcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHHhccCCcEEEEeC
Confidence            986        4566889999987  778999999987765432110    0226999999999999 788999999999


Q ss_pred             CeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCccccHHHHHHH
Q 021331          145 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA  222 (314)
Q Consensus       145 ~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~  222 (314)
                      +.+||+.....+              .+   ++...++++++|+|++++.++.++...+++|+++++. .++.|+...
T Consensus       151 ~~v~g~~~~~~~--------------~~---~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~-~~~~e~~~~  210 (219)
T 3dqp_A          151 GALTEEEATGLI--------------DI---NDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGK-TAIKEALES  210 (219)
T ss_dssp             CSEECSCCCSEE--------------EE---SSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECS-EEHHHHHHT
T ss_pred             ceEecCCCCCcc--------------cc---CCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCC-ccHHHHHHH
Confidence            999998543221              11   2556799999999999999999877678999998886 998888753

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.95  E-value=1.6e-27  Score=205.44  Aligned_cols=226  Identities=13%  Similarity=0.149  Sum_probs=168.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccc-cCCCCCCchhhhhc-cCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      |||||++|+++++.|+++|++|++++|+.+... ...     ..+... ..+++++.+|+.|++++.++++  ++|+|||
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~   82 (313)
T 1qyd_A           10 VGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKV-----QMLLYFKQLGAKLIEASLDDHQRLVDALK--QVDVVIS   82 (313)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHH-----HHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCSEEEE
T ss_pred             EcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHH-----HHHHHHHhCCeEEEeCCCCCHHHHHHHHh--CCCEEEE
Confidence            799999999999999999999999999864310 000     000000 2578999999999999999998  9999999


Q ss_pred             cCCC-----CcccHHHHHHhCC--C-CCcEEEEeeceeeccCCC------CCccCccccchhhHHHHHHhcCCceEEEec
Q 021331           79 INGR-----EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDL------LPHCESRHKGKLNTESVLESKGVNWTSLRP  144 (314)
Q Consensus        79 ~a~~-----~~~~~~~~~~~~~--~-~~~~i~~Ss~~v~~~~~~------~~~~e~~~~~k~~~e~~~~~~~~~~~ilR~  144 (314)
                      +++.     +...+.+++++|.  + ++|||+ |   +|+....      .|....| .+|..+|+++++.+++++++||
T Consensus        83 ~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~g~~~~ilrp  157 (313)
T 1qyd_A           83 ALAGGVLSHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIMEHALQPGSITF-IDKRKVRRAIEAASIPYTYVSS  157 (313)
T ss_dssp             CCCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSCCCCCSSTTHHH-HHHHHHHHHHHHTTCCBCEEEC
T ss_pred             CCccccchhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCccccccCCCCCcchH-HHHHHHHHHHHhcCCCeEEEEe
Confidence            9886     4567899999987  6 889985 4   3442111      1212246 8999999999999999999999


Q ss_pred             CeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCC-ccccHHHHHHHH
Q 021331          145 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARAC  223 (314)
Q Consensus       145 ~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~-~~~s~~el~~~i  223 (314)
                      +.++|+.... +..........++.+.++++++..+++++++|+|++++.++.++...++.|++.++ +.+|+.|+++.+
T Consensus       158 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~  236 (313)
T 1qyd_A          158 NMFAGYFAGS-LAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIW  236 (313)
T ss_dssp             CEEHHHHTTT-SSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHH
T ss_pred             ceeccccccc-cccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHHHHHH
Confidence            9988752110 00000000123344556678888999999999999999999987656788888765 789999999999


Q ss_pred             HHHhCCCCCeeeecCCc
Q 021331          224 AKAAGFPEPELVHYNPK  240 (314)
Q Consensus       224 ~~~~g~~~~~~~~~~~~  240 (314)
                      .+.+|++. .+...+..
T Consensus       237 ~~~~g~~~-~~~~~~~~  252 (313)
T 1qyd_A          237 ERLSEQNL-DKIYISSQ  252 (313)
T ss_dssp             HHHHTCCC-EECCBCSH
T ss_pred             HHhcCCCC-ceEECCHH
Confidence            99999876 66666544

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.95  E-value=6.5e-28  Score=199.60  Aligned_cols=194  Identities=12%  Similarity=0.146  Sum_probs=155.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCce-EEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      |||||++|+++++.|+++|++|++++|+.+......           ..++ +++.+|++  +.+.+++.  ++|+|||+
T Consensus        27 tGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~-----------~~~~~~~~~~Dl~--~~~~~~~~--~~D~vi~~   91 (236)
T 3e8x_A           27 VGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR-----------ERGASDIVVANLE--EDFSHAFA--SIDAVVFA   91 (236)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-----------HTTCSEEEECCTT--SCCGGGGT--TCSEEEEC
T ss_pred             ECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH-----------hCCCceEEEcccH--HHHHHHHc--CCCEEEEC
Confidence            799999999999999999999999999876532111           1478 99999998  77888888  99999999


Q ss_pred             CCC------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCceEEEecC
Q 021331           80 NGR------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPV  145 (314)
Q Consensus        80 a~~------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~~~ilR~~  145 (314)
                      |+.            |..++.++++++.  ++++||++||.+.+......+....|+.+|..+|.+++..+++++++||+
T Consensus        92 ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~gi~~~~lrpg  171 (236)
T 3e8x_A           92 AGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELKRSSLDYTIVRPG  171 (236)
T ss_dssp             CCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHHHHSSSEEEEEEEC
T ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHHHHCCCCEEEEeCC
Confidence            986            3456788999987  78899999996655332111122269999999999999999999999999


Q ss_pred             eeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCccccHHHHHHHHH
Q 021331          146 YIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA  224 (314)
Q Consensus       146 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~  224 (314)
                      .++|+.....              +..........++++++|+|++++.++.++...+++|+++++. +++.|+++.++
T Consensus       172 ~v~~~~~~~~--------------~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~~-~~~~e~~~~i~  235 (236)
T 3e8x_A          172 PLSNEESTGK--------------VTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNGD-TPIAKVVEQLG  235 (236)
T ss_dssp             SEECSCCCSE--------------EEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEECS-EEHHHHHHTC-
T ss_pred             cccCCCCCCe--------------EEeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCCC-cCHHHHHHHhc
Confidence            9999853221              1222334446889999999999999999876678999999884 99999998765

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.95  E-value=4.3e-27  Score=203.33  Aligned_cols=221  Identities=19%  Similarity=0.209  Sum_probs=169.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||||++|+++++.|+++|++|++++|+.+.....+.     .+  ...+++++.+|+.|++++.++++  ++|+|||++
T Consensus        17 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-----~l--~~~~v~~v~~Dl~d~~~l~~a~~--~~d~vi~~a   87 (318)
T 2r6j_A           17 FGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLD-----EF--QSLGAIIVKGELDEHEKLVELMK--KVDVVISAL   87 (318)
T ss_dssp             ETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHH-----HH--HHTTCEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHH-----Hh--hcCCCEEEEecCCCHHHHHHHHc--CCCEEEECC
Confidence            6999999999999999999999999998752111000     00  02578999999999999999999  999999999


Q ss_pred             CCC-cccHHHHHHhCC--C-CCcEEEEeeceeeccCCC--CCc---cCccccchhhHHHHHHhcCCceEEEecCeeeCCC
Q 021331           81 GRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDL--LPH---CESRHKGKLNTESVLESKGVNWTSLRPVYIYGPL  151 (314)
Q Consensus        81 ~~~-~~~~~~~~~~~~--~-~~~~i~~Ss~~v~~~~~~--~~~---~e~~~~~k~~~e~~~~~~~~~~~ilR~~~v~g~~  151 (314)
                      +.. ...+++++++|.  + +++||+ |+   |+....  .+.   ...| .+|..+|+++++.+++++++||+.+++. 
T Consensus        88 ~~~~~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~~~~~~~lr~~~~~~~-  161 (318)
T 2r6j_A           88 AFPQILDQFKILEAIKVAGNIKRFLP-SD---FGVEEDRINALPPFEALI-ERKRMIRRAIEEANIPYTYVSANCFASY-  161 (318)
T ss_dssp             CGGGSTTHHHHHHHHHHHCCCCEEEC-SC---CSSCTTTCCCCHHHHHHH-HHHHHHHHHHHHTTCCBEEEECCEEHHH-
T ss_pred             chhhhHHHHHHHHHHHhcCCCCEEEe-ec---cccCcccccCCCCcchhH-HHHHHHHHHHHhcCCCeEEEEcceehhh-
Confidence            864 567889999987  6 889885 43   442111  111   1246 8899999999999999999999987764 


Q ss_pred             CCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCC-ccccHHHHHHHHHHHhCCC
Q 021331          152 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARACAKAAGFP  230 (314)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~-~~~s~~el~~~i~~~~g~~  230 (314)
                          +...+......+..+.++++++..+++++++|+|++++.++.++...+++|++.++ +.+|+.|+++.+.+.+|++
T Consensus       162 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~  237 (318)
T 2r6j_A          162 ----FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKK  237 (318)
T ss_dssp             ----HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTCC
T ss_pred             ----hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhCCC
Confidence                33333322223445666678888999999999999999999887656778888754 7899999999999999987


Q ss_pred             CCeeeecCCcc
Q 021331          231 EPELVHYNPKE  241 (314)
Q Consensus       231 ~~~~~~~~~~~  241 (314)
                      . .+..++...
T Consensus       238 ~-~~~~~~~~~  247 (318)
T 2r6j_A          238 F-KKIHVPEEE  247 (318)
T ss_dssp             C-EEEEECHHH
T ss_pred             C-ceeecCHHH
Confidence            6 666666543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.94  E-value=6.6e-27  Score=202.39  Aligned_cols=223  Identities=17%  Similarity=0.204  Sum_probs=168.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCC-cccccCCCCCCchhhhh-ccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      |||||++|+++++.|+++|++|++++|+. +......    .+.+.. ...+++++.+|++|++++.++++  ++|+|||
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~--~~d~vi~   83 (321)
T 3c1o_A           10 YGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSS----VQLREEFRSMGVTIIEGEMEEHEKMVSVLK--QVDIVIS   83 (321)
T ss_dssp             ETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHH----HHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEE
T ss_pred             EcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHH----HHHHHHhhcCCcEEEEecCCCHHHHHHHHc--CCCEEEE
Confidence            79999999999999999999999999986 2100000    000000 02578999999999999999999  8999999


Q ss_pred             cCCCC-cccHHHHHHhCC--C-CCcEEEEeeceeeccCCC--CCc---cCccccchhhHHHHHHhcCCceEEEecCeeeC
Q 021331           79 INGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDL--LPH---CESRHKGKLNTESVLESKGVNWTSLRPVYIYG  149 (314)
Q Consensus        79 ~a~~~-~~~~~~~~~~~~--~-~~~~i~~Ss~~v~~~~~~--~~~---~e~~~~~k~~~e~~~~~~~~~~~ilR~~~v~g  149 (314)
                      +++.. ...+++++++|.  + ++|||+ |   +|+....  .+.   ...| .+|..+|+++++.+++++++||+.+++
T Consensus        84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~~~~~~~lrp~~~~~  158 (321)
T 3c1o_A           84 ALPFPMISSQIHIINAIKAAGNIKRFLP-S---DFGCEEDRIKPLPPFESVL-EKKRIIRRAIEAAALPYTYVSANCFGA  158 (321)
T ss_dssp             CCCGGGSGGGHHHHHHHHHHCCCCEEEC-S---CCSSCGGGCCCCHHHHHHH-HHHHHHHHHHHHHTCCBEEEECCEEHH
T ss_pred             CCCccchhhHHHHHHHHHHhCCccEEec-c---ccccCccccccCCCcchHH-HHHHHHHHHHHHcCCCeEEEEeceecc
Confidence            99864 567889999987  6 889883 3   3442111  111   1257 899999999999999999999999887


Q ss_pred             CCCCCchhHHHHHH---HHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecC-CccccHHHHHHHHHH
Q 021331          150 PLNYNPVEEWFFHR---LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG-EKYVTFDGLARACAK  225 (314)
Q Consensus       150 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~-~~~~s~~el~~~i~~  225 (314)
                      +     +...+...   ...++.+.++++++..+++++++|+|++++.++.++...+++|++.+ ++.+|+.|+++.+.+
T Consensus       159 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~  233 (321)
T 3c1o_A          159 Y-----FVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEA  233 (321)
T ss_dssp             H-----HHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHH
T ss_pred             c-----cccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHH
Confidence            5     22222211   12334556667888899999999999999999998765678889886 478999999999999


Q ss_pred             HhCCCCCeeeecCCc
Q 021331          226 AAGFPEPELVHYNPK  240 (314)
Q Consensus       226 ~~g~~~~~~~~~~~~  240 (314)
                      .+|++. .+...+..
T Consensus       234 ~~g~~~-~~~~~~~~  247 (321)
T 3c1o_A          234 KSGLSF-KKVHMPDE  247 (321)
T ss_dssp             HHTSCC-CEEEECHH
T ss_pred             HcCCcc-eeeeCCHH
Confidence            999876 56666543

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.94  E-value=1.7e-26  Score=198.53  Aligned_cols=228  Identities=18%  Similarity=0.185  Sum_probs=167.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      |||||++|+++++.|+++|++|++++|+.+...... . ..+.+... ..+++++.+|+.|++++.++++  ++|+|||+
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~-~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~   83 (307)
T 2gas_A            8 LGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPE-T-KEELIDNYQSLGVILLEGDINDHETLVKAIK--QVDIVICA   83 (307)
T ss_dssp             ESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHH-H-HHHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEEC
T ss_pred             ECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChH-H-HHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh--CCCEEEEC
Confidence            799999999999999999999999999862100000 0 00000000 2578999999999999999999  99999999


Q ss_pred             CCCC-cccHHHHHHhCC--C-CCcEEEEeeceeeccCCC-----CCccCccccchhhHHHHHHhcCCceEEEecCeeeCC
Q 021331           80 NGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDL-----LPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGP  150 (314)
Q Consensus        80 a~~~-~~~~~~~~~~~~--~-~~~~i~~Ss~~v~~~~~~-----~~~~e~~~~~k~~~e~~~~~~~~~~~ilR~~~v~g~  150 (314)
                      ++.. ...+.+++++|.  + ++|||+ |   +||....     .|....| .+|..+|+++++.+++++++||+.++++
T Consensus        84 a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~~i~~~~lrp~~~~~~  158 (307)
T 2gas_A           84 AGRLLIEDQVKIIKAIKEAGNVKKFFP-S---EFGLDVDRHDAVEPVRQVF-EEKASIRRVIEAEGVPYTYLCCHAFTGY  158 (307)
T ss_dssp             SSSSCGGGHHHHHHHHHHHCCCSEEEC-S---CCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHHHTCCBEEEECCEETTT
T ss_pred             CcccccccHHHHHHHHHhcCCceEEee-c---ccccCcccccCCCcchhHH-HHHHHHHHHHHHcCCCeEEEEcceeecc
Confidence            9864 567889999987  6 889884 4   3442111     1211257 8999999999999999999999998886


Q ss_pred             CCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCC-ccccHHHHHHHHHHHhCC
Q 021331          151 LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARACAKAAGF  229 (314)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~-~~~s~~el~~~i~~~~g~  229 (314)
                      ... .+... .......+.+.++++++..+++++++|+|++++.++.++...++.|++.++ +.+|+.|+++.+.+.+|+
T Consensus       159 ~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~  236 (307)
T 2gas_A          159 FLR-NLAQL-DATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGK  236 (307)
T ss_dssp             TGG-GTTCT-TCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTS
T ss_pred             ccc-ccccc-ccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCC
Confidence            311 01000 000112334556677888899999999999999999887656778888765 689999999999999998


Q ss_pred             CCCeeeecCCc
Q 021331          230 PEPELVHYNPK  240 (314)
Q Consensus       230 ~~~~~~~~~~~  240 (314)
                      +. .+...+..
T Consensus       237 ~~-~~~~~~~~  246 (307)
T 2gas_A          237 TL-EKTYVSEE  246 (307)
T ss_dssp             CC-EEEEECHH
T ss_pred             CC-ceeecCHH
Confidence            76 56555543

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.94  E-value=6.5e-27  Score=201.23  Aligned_cols=224  Identities=15%  Similarity=0.189  Sum_probs=167.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCccc--ccCCCCCCchhhhhc-cCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI--AQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      |||||++|+++++.|+++|++|++++|+....  ....     +.+..+ ..+++++.+|++|++++.++++  ++|+||
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-----~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi   82 (308)
T 1qyc_A           10 IGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKA-----QLLESFKASGANIVHGSIDDHASLVEAVK--NVDVVI   82 (308)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHH-----HHHHHHHTTTCEEECCCTTCHHHHHHHHH--TCSEEE
T ss_pred             EcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHH-----HHHHHHHhCCCEEEEeccCCHHHHHHHHc--CCCEEE
Confidence            69999999999999999999999999986431  0000     000000 2578999999999999999999  999999


Q ss_pred             EcCCCC-cccHHHHHHhCC--C-CCcEEEEeeceeeccCCC--C---CccCccccchhhHHHHHHhcCCceEEEecCeee
Q 021331           78 DINGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDL--L---PHCESRHKGKLNTESVLESKGVNWTSLRPVYIY  148 (314)
Q Consensus        78 ~~a~~~-~~~~~~~~~~~~--~-~~~~i~~Ss~~v~~~~~~--~---~~~e~~~~~k~~~e~~~~~~~~~~~ilR~~~v~  148 (314)
                      |+++.. ...+.+++++|.  + ++|||+ |+   ||....  .   |....| .+|..+|+++++.+++++++||+.++
T Consensus        83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~~~~~~~~r~~~~~  157 (308)
T 1qyc_A           83 STVGSLQIESQVNIIKAIKEVGTVKRFFP-SE---FGNDVDNVHAVEPAKSVF-EVKAKVRRAIEAEGIPYTYVSSNCFA  157 (308)
T ss_dssp             ECCCGGGSGGGHHHHHHHHHHCCCSEEEC-SC---CSSCTTSCCCCTTHHHHH-HHHHHHHHHHHHHTCCBEEEECCEEH
T ss_pred             ECCcchhhhhHHHHHHHHHhcCCCceEee-cc---cccCccccccCCcchhHH-HHHHHHHHHHHhcCCCeEEEEeceec
Confidence            999864 467889999987  6 889984 43   432111  1   211246 88999999999999999999999998


Q ss_pred             CCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCC-ccccHHHHHHHHHHHh
Q 021331          149 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARACAKAA  227 (314)
Q Consensus       149 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~-~~~s~~el~~~i~~~~  227 (314)
                      |+.... +... ......++.+.++++++..+++++++|+|++++.++.++...+++|++.++ +.+|+.|+++.+.+.+
T Consensus       158 ~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~  235 (308)
T 1qyc_A          158 GYFLRS-LAQA-GLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKI  235 (308)
T ss_dssp             HHHTTT-TTCT-TCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHT
T ss_pred             cccccc-cccc-cccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHh
Confidence            852111 0000 000113344566678888999999999999999999887656788888765 6899999999999999


Q ss_pred             CCCCCeeeecCC
Q 021331          228 GFPEPELVHYNP  239 (314)
Q Consensus       228 g~~~~~~~~~~~  239 (314)
                      |++. .+...+.
T Consensus       236 g~~~-~~~~~~~  246 (308)
T 1qyc_A          236 DKTL-EKAYVPE  246 (308)
T ss_dssp             TSCC-EEEEECH
T ss_pred             CCCC-ceEeCCH
Confidence            9876 5665554

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.94  E-value=1.8e-26  Score=188.92  Aligned_cols=193  Identities=18%  Similarity=0.236  Sum_probs=132.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||||++|+++++.|+++|++|++++|+++.....            ..+++++.+|++|+++  +++.  ++|+|||++
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------------~~~~~~~~~D~~d~~~--~~~~--~~d~vi~~a   69 (221)
T 3ew7_A            6 IGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT------------HKDINILQKDIFDLTL--SDLS--DQNVVVDAY   69 (221)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH------------CSSSEEEECCGGGCCH--HHHT--TCSEEEECC
T ss_pred             EcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc------------cCCCeEEeccccChhh--hhhc--CCCEEEECC
Confidence            79999999999999999999999999987653211            1578999999999887  7777  899999999


Q ss_pred             CCC-------cccHHHHHHhCC--CCCcEEEEeeceeeccCCC-CCc--------cCccccchhhHHHH--HH--hcCCc
Q 021331           81 GRE-------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL-LPH--------CESRHKGKLNTESV--LE--SKGVN  138 (314)
Q Consensus        81 ~~~-------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~-~~~--------~e~~~~~k~~~e~~--~~--~~~~~  138 (314)
                      +..       ..++++++++|.  +++++|++||.+++..... .+.        ...|+.+|..+|.+  +.  ..+++
T Consensus        70 g~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~gi~  149 (221)
T 3ew7_A           70 GISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFS  149 (221)
T ss_dssp             CSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHHTTTTTSC
T ss_pred             cCCccccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHhhccCcc
Confidence            874       356789999988  5789999999776532221 111        11488889888876  55  68899


Q ss_pred             eEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCccccHHH
Q 021331          139 WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDG  218 (314)
Q Consensus       139 ~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s~~e  218 (314)
                      ++++||+.+|||+.....   +   ......+.+++.+   .++++++|+|++++.++.++...+++|+++++.+.+..|
T Consensus       150 ~~ivrp~~v~g~~~~~~~---~---~~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~~~~  220 (221)
T 3ew7_A          150 WTYISPSAMFEPGERTGD---Y---QIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEHHHHH  220 (221)
T ss_dssp             EEEEECSSCCCCC------------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC--------
T ss_pred             EEEEeCcceecCCCccCc---e---EeccccceecCCC---CceEeHHHHHHHHHHHHhCccccCCEEEECCCCcccccc
Confidence            999999999998432111   1   1122333333333   369999999999999999988889999999998777654

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.94  E-value=8.5e-27  Score=196.48  Aligned_cols=205  Identities=13%  Similarity=0.039  Sum_probs=159.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||||+||+++++.|+++|++|++++|+....   ..           .++.++.+|++|++.+.++++  ++|+|||+|
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~-----------~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a   71 (267)
T 3ay3_A            8 TGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA---AE-----------AHEEIVACDLADAQAVHDLVK--DCDGIIHLG   71 (267)
T ss_dssp             ESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC---CC-----------TTEEECCCCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc---cC-----------CCccEEEccCCCHHHHHHHHc--CCCEEEECC
Confidence            79999999999999999999999999987541   11           457889999999999999998  899999999


Q ss_pred             CCC------------cccHHHHHHhCC--CCCcEEEEeeceeeccCC-CCCccC--------ccccchhhHHHHHH----
Q 021331           81 GRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD-LLPHCE--------SRHKGKLNTESVLE----  133 (314)
Q Consensus        81 ~~~------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~-~~~~~e--------~~~~~k~~~e~~~~----  133 (314)
                      +..            ..++.++++++.  ++++||++||..+|+... ..++.|        .|+.+|..+|.+++    
T Consensus        72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~  151 (267)
T 3ay3_A           72 GVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYH  151 (267)
T ss_dssp             SCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence            863            345678888876  778999999999987532 122222        68999999999875    


Q ss_pred             hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCcc
Q 021331          134 SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  213 (314)
Q Consensus       134 ~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~  213 (314)
                      +++++++++||+.+|+...                      .+...++++|++|+|++++.++.++...+++|++.++..
T Consensus       152 ~~gi~~~~lrp~~v~~~~~----------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~  209 (267)
T 3ay3_A          152 KFDIETLNIRIGSCFPKPK----------------------DARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASANT  209 (267)
T ss_dssp             TTCCCEEEEEECBCSSSCC----------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSCS
T ss_pred             HcCCCEEEEeceeecCCCC----------------------CCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCCCcc
Confidence            4689999999999985310                      112346799999999999999987654346777754320


Q ss_pred             ccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHhh
Q 021331          214 VTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNL  286 (314)
Q Consensus       214 ~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~  286 (314)
                                                                ....|..++ +.+||.|+++++++++++.+.
T Consensus       210 ------------------------------------------~~~~d~~~~-~~lg~~p~~~~~~~~~~~~~~  239 (267)
T 3ay3_A          210 ------------------------------------------ESWWDNDKS-AFLGWVPQDSSEIWREEIEQQ  239 (267)
T ss_dssp             ------------------------------------------SCCBCCGGG-GGGCCCCCCCGGGGHHHHHHS
T ss_pred             ------------------------------------------ccccCHHHH-HHcCCCCCCCHHHHHHHHHhh
Confidence                                                      011456677 789999999999999998763

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.94  E-value=8.6e-27  Score=194.66  Aligned_cols=206  Identities=15%  Similarity=0.109  Sum_probs=157.7

Q ss_pred             CCcccccHHHHHHHHHHC--CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      |||+|++|+++++.|+++  |++|++++|++..... +           ..++.++.+|++|++++.++++  ++|+|||
T Consensus        10 tGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~-~-----------~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~   75 (253)
T 1xq6_A           10 TGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-I-----------GGEADVFIGDITDADSINPAFQ--GIDALVI   75 (253)
T ss_dssp             ESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH-T-----------TCCTTEEECCTTSHHHHHHHHT--TCSEEEE
T ss_pred             EcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh-c-----------CCCeeEEEecCCCHHHHHHHHc--CCCEEEE
Confidence            799999999999999999  8999999998654321 1           1467889999999999999998  8999999


Q ss_pred             cCCCCc-----------------------------ccHHHHHHhCC--CCCcEEEEeeceeeccCCC-CCcc-Cccccch
Q 021331           79 INGREA-----------------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDL-LPHC-ESRHKGK  125 (314)
Q Consensus        79 ~a~~~~-----------------------------~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~-~~~~-e~~~~~k  125 (314)
                      +++...                             .++.++++++.  ++++||++||.+++..... .++. ..|..+|
T Consensus        76 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~y~~sK  155 (253)
T 1xq6_A           76 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWK  155 (253)
T ss_dssp             CCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHH
T ss_pred             eccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCCccccccchhHHHHH
Confidence            988531                             23678888877  7889999999877532211 1111 1355689


Q ss_pred             hhHHHHHHhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCce
Q 021331          126 LNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV  205 (314)
Q Consensus       126 ~~~e~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~  205 (314)
                      ..+|.++++.+++++++||+.+||+......       ...+....+++.   ..++++++|+|++++.++.++...+++
T Consensus       156 ~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~~-------~~~~~~~~~~~~---~~~~~~~~Dva~~~~~~~~~~~~~g~~  225 (253)
T 1xq6_A          156 RKAEQYLADSGTPYTIIRAGGLLDKEGGVRE-------LLVGKDDELLQT---DTKTVPRADVAEVCIQALLFEEAKNKA  225 (253)
T ss_dssp             HHHHHHHHTSSSCEEEEEECEEECSCSSSSC-------EEEESTTGGGGS---SCCEEEHHHHHHHHHHHTTCGGGTTEE
T ss_pred             HHHHHHHHhCCCceEEEecceeecCCcchhh-------hhccCCcCCcCC---CCcEEcHHHHHHHHHHHHcCccccCCE
Confidence            9999999999999999999999998532110       000111112111   246999999999999999987656889


Q ss_pred             EEecCCc---cccHHHHHHHHHHHhCCC
Q 021331          206 FNISGEK---YVTFDGLARACAKAAGFP  230 (314)
Q Consensus       206 ~~i~~~~---~~s~~el~~~i~~~~g~~  230 (314)
                      ||+++++   ++|+.|+++.+.+.+|++
T Consensus       226 ~~i~~~~~~~~~s~~e~~~~~~~~~g~~  253 (253)
T 1xq6_A          226 FDLGSKPEGTSTPTKDFKALFSQVTSRF  253 (253)
T ss_dssp             EEEEECCTTTSCCCCCHHHHHHTCCCCC
T ss_pred             EEecCCCcCCCCCHHHHHHHHHHHhCCC
Confidence            9999964   599999999999988863

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.93  E-value=5.6e-26  Score=186.37  Aligned_cols=192  Identities=14%  Similarity=0.118  Sum_probs=144.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||||+||+++++.|+++|++|++++|+.+......           ..+++++.+|++|+++  +++.  ++|+|||++
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----------~~~~~~~~~D~~d~~~--~~~~--~~d~vi~~a   70 (224)
T 3h2s_A            6 LGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-----------GATVATLVKEPLVLTE--ADLD--SVDAVVDAL   70 (224)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-----------CTTSEEEECCGGGCCH--HHHT--TCSEEEECC
T ss_pred             EcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-----------CCCceEEecccccccH--hhcc--cCCEEEECC
Confidence            799999999999999999999999999876643222           2579999999999887  7777  899999999


Q ss_pred             CC---------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCC---Cc--------cCccccchhhHHHH--H-Hhc
Q 021331           81 GR---------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLL---PH--------CESRHKGKLNTESV--L-ESK  135 (314)
Q Consensus        81 ~~---------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~---~~--------~e~~~~~k~~~e~~--~-~~~  135 (314)
                      +.         +..++++++++|.  + ++||++||.+.+......   +.        ...|+.+|..+|.+  + ++.
T Consensus        71 g~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~  149 (224)
T 3h2s_A           71 SVPWGSGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNA  149 (224)
T ss_dssp             CCCTTSSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTCT
T ss_pred             ccCCCcchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhcC
Confidence            88         4567899999998  6 899999997654322211   11        12688899998865  2 367


Q ss_pred             CCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCcccc
Q 021331          136 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  215 (314)
Q Consensus       136 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s  215 (314)
                      +++++++||+.+||++....+.       .....+..   +....++++++|+|++++.+++++...+++|++++.+..+
T Consensus       150 ~i~~~ivrp~~v~g~~~~~~~~-------~~~~~~~~---~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~~~~  219 (224)
T 3h2s_A          150 NVNWIGISPSEAFPSGPATSYV-------AGKDTLLV---GEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDADLEH  219 (224)
T ss_dssp             TSCEEEEEECSBCCCCCCCCEE-------EESSBCCC---CTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC---
T ss_pred             CCcEEEEcCccccCCCcccCce-------eccccccc---CCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCcchh
Confidence            8999999999999985432210       11122222   2344689999999999999999988789999999987665


Q ss_pred             HHH
Q 021331          216 FDG  218 (314)
Q Consensus       216 ~~e  218 (314)
                      +.+
T Consensus       220 ~~~  222 (224)
T 3h2s_A          220 HHH  222 (224)
T ss_dssp             ---
T ss_pred             ccc
Confidence            543

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.93  E-value=3e-25  Score=179.56  Aligned_cols=184  Identities=18%  Similarity=0.284  Sum_probs=145.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||||++|+++++.|+++|++|++++|+++......           ..++.++.+|++|++++.++++  ++|+|||++
T Consensus         9 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a   75 (206)
T 1hdo_A            9 FGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-----------PRPAHVVVGDVLQAADVDKTVA--GQDAVIVLL   75 (206)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-----------CCCSEEEESCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             EcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-----------CCceEEEEecCCCHHHHHHHHc--CCCEEEECc
Confidence            699999999999999999999999999876532211           2578999999999999999998  899999999


Q ss_pred             CCCc---------ccHHHHHHhCC--CCCcEEEEeeceeeccCCCCC-ccCccccchhhHHHHHHhcCCceEEEecCeee
Q 021331           81 GREA---------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLP-HCESRHKGKLNTESVLESKGVNWTSLRPVYIY  148 (314)
Q Consensus        81 ~~~~---------~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~-~~e~~~~~k~~~e~~~~~~~~~~~ilR~~~v~  148 (314)
                      +...         .++.++++++.  ++++||++||.++|+.....+ ....|..+|..+|+++++.+++++++||+.+ 
T Consensus        76 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~lrp~~~-  154 (206)
T 1hdo_A           76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHI-  154 (206)
T ss_dssp             CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHHTCSEEEEECCSEE-
T ss_pred             cCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccccchhHHHHHHHHHHHHHhCCCCEEEEeCCcc-
Confidence            8643         35788888887  788999999999987654332 1226899999999999999999999999998 


Q ss_pred             CCCCC-CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCc
Q 021331          149 GPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK  212 (314)
Q Consensus       149 g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~  212 (314)
                      +++.. ..+.            ..+.+...  .++++++|+|++++.++.++...+++|++++++
T Consensus       155 ~~~~~~~~~~------------~~~~~~~~--~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g~  205 (206)
T 1hdo_A          155 GDQPLTGAYT------------VTLDGRGP--SRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQY  205 (206)
T ss_dssp             ECCCCCSCCE------------EESSSCSS--CSEEEHHHHHHHHHHTTSCSTTTTCEEEEECCC
T ss_pred             cCCCCCcceE------------ecccCCCC--CCccCHHHHHHHHHHHhcCccccccceeeeccc
Confidence            33221 1110            01111111  489999999999999999876678999999875

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.92  E-value=5.6e-26  Score=185.19  Aligned_cols=183  Identities=18%  Similarity=0.137  Sum_probs=144.1

Q ss_pred             CCcccccHHHHHHHHHHCCC--eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      |||||++|++++++|+++|+  +|++++|++.. .              ..++.++.+|++|++++.+++    +|+|||
T Consensus        11 tGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-~--------------~~~~~~~~~D~~~~~~~~~~~----~d~vi~   71 (215)
T 2a35_A           11 AGATGLTGEHLLDRILSEPTLAKVIAPARKALA-E--------------HPRLDNPVGPLAELLPQLDGS----IDTAFC   71 (215)
T ss_dssp             ECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-C--------------CTTEECCBSCHHHHGGGCCSC----CSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-c--------------CCCceEEeccccCHHHHHHhh----hcEEEE
Confidence            69999999999999999998  99999998765 1              256888899999988877766    999999


Q ss_pred             cCCCC--------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCc-eEE
Q 021331           79 INGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVN-WTS  141 (314)
Q Consensus        79 ~a~~~--------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~-~~i  141 (314)
                      +++..              ..++.++++++.  ++++||++||.++|+.+.     ..|+.+|..+|++++..+++ +++
T Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~-----~~y~~sK~~~e~~~~~~~~~~~~~  146 (215)
T 2a35_A           72 CLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSS-----IFYNRVKGELEQALQEQGWPQLTI  146 (215)
T ss_dssp             CCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS-----SHHHHHHHHHHHHHTTSCCSEEEE
T ss_pred             CeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCCCc-----cHHHHHHHHHHHHHHHcCCCeEEE
Confidence            99864              235677888876  678999999999986422     25999999999999999999 999


Q ss_pred             EecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCccccHH
Q 021331          142 LRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD  217 (314)
Q Consensus       142 lR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s~~  217 (314)
                      +||+.+|||+....+...+    . ....++ ++  ..++++|++|+|++++.++.++.  +++|++++++.+++.
T Consensus       147 vrp~~v~g~~~~~~~~~~~----~-~~~~~~-~~--~~~~~i~~~Dva~~~~~~~~~~~--~~~~~i~~~~~~~~~  212 (215)
T 2a35_A          147 ARPSLLFGPREEFRLAEIL----A-APIARI-LP--GKYHGIEACDLARALWRLALEEG--KGVRFVESDELRKLG  212 (215)
T ss_dssp             EECCSEESTTSCEEGGGGT----T-CCCC-------CHHHHHHHHHHHHHHHHHHTCCC--SEEEEEEHHHHHHHH
T ss_pred             EeCceeeCCCCcchHHHHH----H-Hhhhhc-cC--CCcCcEeHHHHHHHHHHHHhcCC--CCceEEcHHHHHHhh
Confidence            9999999996543332211    1 121222 22  25789999999999999998865  789999988766553

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.91  E-value=5.2e-24  Score=176.74  Aligned_cols=186  Identities=19%  Similarity=0.184  Sum_probs=142.2

Q ss_pred             CCcccccHHHHHHHHHHCCC--eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      |||+|+||+++++.|+++|+  +|++++|+++......           ..++.++.+|++|++++.++++  ++|+|||
T Consensus        24 tGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~   90 (242)
T 2bka_A           24 LGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----------YKNVNQEVVDFEKLDDYASAFQ--GHDVGFC   90 (242)
T ss_dssp             ECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----------GGGCEEEECCGGGGGGGGGGGS--SCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-----------cCCceEEecCcCCHHHHHHHhc--CCCEEEE
Confidence            79999999999999999999  9999999876532111           2468899999999999999998  9999999


Q ss_pred             cCCCC-------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCC-ceEEE
Q 021331           79 INGRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGV-NWTSL  142 (314)
Q Consensus        79 ~a~~~-------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~-~~~il  142 (314)
                      +||..             ..++.++++++.  +.++||++||.++|+...     ..|+.+|..+|.+++..++ +++++
T Consensus        91 ~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~-----~~Y~~sK~~~e~~~~~~~~~~~~~v  165 (242)
T 2bka_A           91 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSN-----FLYLQVKGEVEAKVEELKFDRYSVF  165 (242)
T ss_dssp             CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS-----SHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCCc-----chHHHHHHHHHHHHHhcCCCCeEEE
Confidence            99974             345677888876  678999999999886322     2599999999999999999 59999


Q ss_pred             ecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecC
Q 021331          143 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG  210 (314)
Q Consensus       143 R~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~  210 (314)
                      ||+.+|||.........+........+. .++    ...+++++|+|++++.++.++.. .+.+++.+
T Consensus       166 rpg~v~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~dva~~~~~~~~~~~~-~~~~~~~~  227 (242)
T 2bka_A          166 RPGVLLCDRQESRPGEWLVRKFFGSLPD-SWA----SGHSVPVVTVVRAMLNNVVRPRD-KQMELLEN  227 (242)
T ss_dssp             ECCEEECTTGGGSHHHHHHHHHHCSCCT-TGG----GGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEH
T ss_pred             cCceecCCCCCCcHHHHHHHHhhcccCc-ccc----CCcccCHHHHHHHHHHHHhCccc-cCeeEeeH
Confidence            9999999964332333333333322211 111    13589999999999999987653 45666654

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.91  E-value=4.5e-24  Score=179.72  Aligned_cols=178  Identities=12%  Similarity=0.007  Sum_probs=144.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||+|+||+++++.|+++|++|++++|+.....              ..++.++.+|++|++++.++++  ++|+|||+|
T Consensus         9 TGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------------~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~A   72 (267)
T 3rft_A            9 TGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------------GPNEECVQCDLADANAVNAMVA--GCDGIVHLG   72 (267)
T ss_dssp             ESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------------CTTEEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------------CCCCEEEEcCCCCHHHHHHHHc--CCCEEEECC
Confidence            799999999999999999999999999876532              2679999999999999999998  999999999


Q ss_pred             CCC------------cccHHHHHHhCC--CCCcEEEEeeceeeccCC-CCCcc--------CccccchhhHHHHHH----
Q 021331           81 GRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD-LLPHC--------ESRHKGKLNTESVLE----  133 (314)
Q Consensus        81 ~~~------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~-~~~~~--------e~~~~~k~~~e~~~~----  133 (314)
                      |..            ..++.++++++.  +.++||++||..+|+... ..++.        ..|+.+|..+|.+++    
T Consensus        73 g~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~  152 (267)
T 3rft_A           73 GISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFD  152 (267)
T ss_dssp             SCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence            873            345678888877  778999999999986321 11111        269999999998874    


Q ss_pred             hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCcc
Q 021331          134 SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  213 (314)
Q Consensus       134 ~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~  213 (314)
                      +++++++++||+.|||+.                      +++....++++++|+++++..++..+...+.++++.++++
T Consensus       153 ~~g~~~~~vr~~~v~~~~----------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~~  210 (267)
T 3rft_A          153 KFGQETALVRIGSCTPEP----------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASAND  210 (267)
T ss_dssp             HHCCCEEEEEECBCSSSC----------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCCT
T ss_pred             HhCCeEEEEEeecccCCC----------------------CCCCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCCC
Confidence            578999999999999872                      2334456789999999999999998765556888887765


Q ss_pred             ccH
Q 021331          214 VTF  216 (314)
Q Consensus       214 ~s~  216 (314)
                      .++
T Consensus       211 ~~~  213 (267)
T 3rft_A          211 AGW  213 (267)
T ss_dssp             TCC
T ss_pred             CCc
Confidence            443

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.91  E-value=3.1e-23  Score=171.42  Aligned_cols=186  Identities=17%  Similarity=0.209  Sum_probs=139.2

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      |||+|+||+++++.|+++| ++|++++|+++......           ..++.++.+|++|++++.++++  ++|+|||+
T Consensus        29 tGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~D~vv~~   95 (236)
T 3qvo_A           29 LGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-----------PTNSQIIMGDVLNHAALKQAMQ--GQDIVYAN   95 (236)
T ss_dssp             ETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-----------CTTEEEEECCTTCHHHHHHHHT--TCSEEEEE
T ss_pred             EeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-----------cCCcEEEEecCCCHHHHHHHhc--CCCEEEEc
Confidence            7999999999999999999 99999999987643322           2579999999999999999999  99999999


Q ss_pred             CCCCc--ccHHHHHHhCC--CCCcEEEEeeceeeccCCCCC--ccC----ccccchhhHHHHHHhcCCceEEEecCeeeC
Q 021331           80 NGREA--DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLP--HCE----SRHKGKLNTESVLESKGVNWTSLRPVYIYG  149 (314)
Q Consensus        80 a~~~~--~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~--~~e----~~~~~k~~~e~~~~~~~~~~~ilR~~~v~g  149 (314)
                      ++...  ..+++++++|.  ++++||++||.++|+.....+  ..+    .+...+..+|+.++..++++++|||+.+++
T Consensus        96 a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~vrPg~i~~  175 (236)
T 3qvo_A           96 LTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTD  175 (236)
T ss_dssp             CCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHHHHHHTSCSEEEEEEECEEEC
T ss_pred             CCCCchhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHHHCCCCEEEEeCCcccC
Confidence            98643  34678888887  778999999999987543321  111    233456677888889999999999999999


Q ss_pred             CCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-cCCceEEecCCcc
Q 021331          150 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGEKY  213 (314)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-~~~~~~~i~~~~~  213 (314)
                      +.....              ............+++.+|+|++++.++.++. ..++.|+++++..
T Consensus       176 ~~~~~~--------------~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~  226 (236)
T 3qvo_A          176 EDIIDY--------------ELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGT  226 (236)
T ss_dssp             CSCCCC--------------EEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSSC
T ss_pred             CCCcce--------------EEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCCC
Confidence            742110              0110111112358999999999999999866 5788999998863

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.89  E-value=4.5e-23  Score=168.72  Aligned_cols=187  Identities=19%  Similarity=0.259  Sum_probs=142.9

Q ss_pred             CCcccccHHHHHHHHH-HCCCeEEEEEcCCc-ccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKA-PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~-~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      |||+|++|+++++.|+ +.|++|++++|+++ .....         .....++.++.+|++|++++.++++  ++|+|||
T Consensus        11 tGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vv~   79 (221)
T 3r6d_A           11 LGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPE---------IIDHERVTVIEGSFQNPGXLEQAVT--NAEVVFV   79 (221)
T ss_dssp             ESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHH---------HHTSTTEEEEECCTTCHHHHHHHHT--TCSEEEE
T ss_pred             EeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhh---------ccCCCceEEEECCCCCHHHHHHHHc--CCCEEEE
Confidence            7999999999999999 89999999999876 43211         0013679999999999999999998  9999999


Q ss_pred             cCCC-CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCC------ccC-ccccchhhHHHHHHhcCCceEEEecCeee
Q 021331           79 INGR-EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLP------HCE-SRHKGKLNTESVLESKGVNWTSLRPVYIY  148 (314)
Q Consensus        79 ~a~~-~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~------~~e-~~~~~k~~~e~~~~~~~~~~~ilR~~~v~  148 (314)
                      ++|. +.. +++++++|.  +.++||++||.++|+......      ... .|..+|..+|.++++.++++++|||+.++
T Consensus        80 ~ag~~n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~vrpg~v~  158 (221)
T 3r6d_A           80 GAMESGSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLY  158 (221)
T ss_dssp             SCCCCHHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEEEEEECEEE
T ss_pred             cCCCCChh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHhCCCCEEEEechhhc
Confidence            9987 444 888999887  778999999998886432110      001 58899999999999999999999999999


Q ss_pred             CCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh--cCCc-cCCceEEecCCc
Q 021331          149 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL--GNEK-ASRQVFNISGEK  212 (314)
Q Consensus       149 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l--~~~~-~~~~~~~i~~~~  212 (314)
                      ++.....+             ............+++.+|+|++++.++  +++. ..++.+.+.++.
T Consensus       159 ~~~~~~~~-------------~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~  212 (221)
T 3r6d_A          159 NDPEXTDY-------------ELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG  212 (221)
T ss_dssp             CCTTCCCC-------------EEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred             CCCCCcce-------------eeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence            97321111             011011111124899999999999999  7755 467788887664

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.84  E-value=9.8e-22  Score=164.17  Aligned_cols=193  Identities=19%  Similarity=0.162  Sum_probs=136.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC--CccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~--~~d~vi~   78 (314)
                      |||+|+||+++++.|+++|++|++++|+.+....                  .+.+|+.|++++.++++..  ++|+|||
T Consensus         7 tGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------------------~~~~D~~~~~~~~~~~~~~~~~~d~vi~   68 (255)
T 2dkn_A            7 TGSASGIGAALKELLARAGHTVIGIDRGQADIEA------------------DLSTPGGRETAVAAVLDRCGGVLDGLVC   68 (255)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------------CTTSHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             eCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc------------------cccCCcccHHHHHHHHHHcCCCccEEEE
Confidence            7999999999999999999999999998765221                  1467999999998888654  7999999


Q ss_pred             cCCCCc-------------ccHHHHHHhCC------CCCcEEEEeeceeeccCCCC-----------------------C
Q 021331           79 INGREA-------------DEVEPILDALP------NLEQFIYCSSAGVYLKSDLL-----------------------P  116 (314)
Q Consensus        79 ~a~~~~-------------~~~~~~~~~~~------~~~~~i~~Ss~~v~~~~~~~-----------------------~  116 (314)
                      +||...             .++.++++++.      +.+++|++||..+|+.....                       +
T Consensus        69 ~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (255)
T 2dkn_A           69 CAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQ  148 (255)
T ss_dssp             CCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCC
Confidence            998643             23445555432      45799999999888643110                       1


Q ss_pred             ccCccccchhhHHHHHHh-------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHH
Q 021331          117 HCESRHKGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  189 (314)
Q Consensus       117 ~~e~~~~~k~~~e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  189 (314)
                      ....|+.+|..+|.+++.       .+++++++||+.++|+.     ...+.............. + ....+++++|+|
T Consensus       149 ~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~-----~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~dva  221 (255)
T 2dkn_A          149 THLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPL-----LQASKADPRYGESTRRFV-A-PLGRGSEPREVA  221 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHH-----HHHHHHCTTTHHHHHSCC-C-TTSSCBCHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchh-----hhhcccchhhHHHHHHHH-H-HhcCCCCHHHHH
Confidence            112689999998887743       58999999999999872     111111000000000001 1 334789999999


Q ss_pred             HHHHHHhcCC--ccCCceEEecCCccccHHH
Q 021331          190 RAFVQVLGNE--KASRQVFNISGEKYVTFDG  218 (314)
Q Consensus       190 ~~~~~~l~~~--~~~~~~~~i~~~~~~s~~e  218 (314)
                      ++++.++.++  ...|++|+++++..+++.|
T Consensus       222 ~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          222 EAIAFLLGPQASFIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred             HHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence            9999999875  2368899999998777654

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.84  E-value=2.3e-21  Score=164.09  Aligned_cols=212  Identities=15%  Similarity=0.138  Sum_probs=148.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.........     .+. ...++.++.+|++|++++.++++..     ++|+
T Consensus        22 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   95 (278)
T 2bgk_A           22 TGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCN-----NIG-SPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI   95 (278)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHC-CTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHH-----HhC-CCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999987644211000     000 0126899999999999998887643     6999


Q ss_pred             EEEcCCCCc----------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           76 VYDINGREA----------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~~----------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      |||+||...                      .++.+++++    +.  +..+||++||...+.....  ....|+.+|..
T Consensus        96 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--~~~~Y~~sK~a  173 (278)
T 2bgk_A           96 MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG--VSHVYTATKHA  173 (278)
T ss_dssp             EEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT--SCHHHHHHHHH
T ss_pred             EEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCC--CCcchHHHHHH
Confidence            999998531                      112233333    32  4679999999887754320  12259999999


Q ss_pred             HHHHHHh-------cCCceEEEecCeeeCCCCCCch--hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          128 TESVLES-------KGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       128 ~e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      .+.+.+.       ++++++++||+.++++......  .......+....+       .....+++++|+|++++.++.+
T Consensus       174 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~dva~~~~~l~~~  246 (278)
T 2bgk_A          174 VLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA-------NLKGTLLRAEDVADAVAYLAGD  246 (278)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC-------SSCSCCCCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccc-------ccccccCCHHHHHHHHHHHcCc
Confidence            8887642       5899999999999998643211  1222222222111       1123588999999999999975


Q ss_pred             Cc--cCCceEEecCCccccHHHHHHHHHHHh
Q 021331          199 EK--ASRQVFNISGEKYVTFDGLARACAKAA  227 (314)
Q Consensus       199 ~~--~~~~~~~i~~~~~~s~~el~~~i~~~~  227 (314)
                      +.  ..|++|++.++..+++.|+++.+.+.+
T Consensus       247 ~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          247 ESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             GGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             ccccCCCCEEEECCcccccCCccchhhhhhc
Confidence            32  368899999999999999998876543

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.82  E-value=1.7e-20  Score=159.02  Aligned_cols=213  Identities=16%  Similarity=0.149  Sum_probs=147.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......        .....++.++.+|++|++++.++++..     ++|+
T Consensus        11 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A           11 TGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLV--------AAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH--------HHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            899999999999999999999999999876532111        112357899999999999998888654     7899


Q ss_pred             EEEcCCCCc--------------------cc----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |||+||...                    .+    ++.++..+.  +..++|++||...+...   +....|+.+|...+
T Consensus        83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---~~~~~Y~~sK~a~~  159 (281)
T 3m1a_A           83 LVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSF---AGFSAYSATKAALE  159 (281)
T ss_dssp             EEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC---TTCHHHHHHHHHHH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCC---CCchHHHHHHHHHH
Confidence            999998631                    12    445555554  66899999997665332   22236999999888


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCC------chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYN------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      .+.+       .+++++++++||.+.++....      .....+...........   .......+.+++|+|++++.++
T Consensus       160 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~dva~a~~~~~  236 (281)
T 3m1a_A          160 QLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLV---QGSDGSQPGDPAKAAAAIRLAL  236 (281)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHH---HC-----CBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHH---hhccCCCCCCHHHHHHHHHHHH
Confidence            8763       268999999999998874210      01111111111111111   1112346788999999999999


Q ss_pred             cCCccCCceEEecCCccccHHHHHHHHHHHhC
Q 021331          197 GNEKASRQVFNISGEKYVTFDGLARACAKAAG  228 (314)
Q Consensus       197 ~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g  228 (314)
                      +++. .+..|+++++......+....+.+.++
T Consensus       237 ~~~~-~~~~~~l~s~~~~~i~g~~~~i~~~~~  267 (281)
T 3m1a_A          237 DTEK-TPLRLALGGDAVDFLTGHLDSVRAELT  267 (281)
T ss_dssp             HSSS-CCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred             hCCC-CCeEEecCchHHHHHHHHHHHHHHHHH
Confidence            9876 567999998877777777777777665

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.82  E-value=1.4e-20  Score=157.17  Aligned_cols=199  Identities=14%  Similarity=0.134  Sum_probs=139.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        17 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   91 (255)
T 1fmc_A           17 TGAGAGIGKEIAITFATAGASVVVSDINADAANHVV-----DEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI   91 (255)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865422111     112222357889999999999998887642     7999


Q ss_pred             EEEcCCCCc-------------------ccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           76 VYDINGREA-------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        76 vi~~a~~~~-------------------~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      |||+||...                   .++.++++++    .  +.++||++||...+....   ....|+.+|...+.
T Consensus        92 vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---~~~~Y~~sK~a~~~  168 (255)
T 1fmc_A           92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI---NMTSYASSKAAASH  168 (255)
T ss_dssp             EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT---TCHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCC---CCcccHHHHHHHHH
Confidence            999998632                   1223334443    2  567999999987764322   12269999999888


Q ss_pred             HHHh-------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--c
Q 021331          131 VLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--A  201 (314)
Q Consensus       131 ~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~  201 (314)
                      +.+.       .+++++++||+.++++.........+......+.++         ..+.+++|+|++++.++..+.  .
T Consensus       169 ~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~~~~~  239 (255)
T 1fmc_A          169 LVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI---------RRLGQPQDIANAALFLCSPAASWV  239 (255)
T ss_dssp             HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSS---------CSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCc---------ccCCCHHHHHHHHHHHhCCccccC
Confidence            7642       489999999999998742111223333333333321         247789999999999997643  2


Q ss_pred             CCceEEecCCccccH
Q 021331          202 SRQVFNISGEKYVTF  216 (314)
Q Consensus       202 ~~~~~~i~~~~~~s~  216 (314)
                      .|++|++.++..+|+
T Consensus       240 ~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          240 SGQILTVSGGGVQEL  254 (255)
T ss_dssp             CSCEEEESTTSCCCC
T ss_pred             CCcEEEECCceeccC
Confidence            578999999987764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.81  E-value=5.2e-20  Score=152.73  Aligned_cols=193  Identities=15%  Similarity=0.149  Sum_probs=136.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-CccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi~~   79 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......         ....+++++.+|++|++++.++++.. ++|+|||+
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---------~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 1cyd_A           13 TGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLA---------KECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   83 (244)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---------HHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---------HhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEEC
Confidence            799999999999999999999999999865422111         01135778899999999999998744 48999999


Q ss_pred             CCCCc--------------------ccHHHHHHhC----C--C-CCcEEEEeeceeeccCCCCCccCccccchhhHHHHH
Q 021331           80 NGREA--------------------DEVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVL  132 (314)
Q Consensus        80 a~~~~--------------------~~~~~~~~~~----~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~  132 (314)
                      ||...                    .++.++++++    .  + .++||++||...+....   ....|+.+|...+.++
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---~~~~Y~~sK~a~~~~~  160 (244)
T 1cyd_A           84 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP---NLITYSSTKGAMTMLT  160 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT---TBHHHHHHHHHHHHHH
T ss_pred             CcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCC---CcchhHHHHHHHHHHH
Confidence            98532                    1223334433    2  3 57899999987765322   2236999999988876


Q ss_pred             Hh-------cCCceEEEecCeeeCCCCCCc-hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cC
Q 021331          133 ES-------KGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--AS  202 (314)
Q Consensus       133 ~~-------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~  202 (314)
                      +.       .+++++++||+.++++..... ....+...+..+.+         ..++++++|+|++++.+++++.  ..
T Consensus       161 ~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~  231 (244)
T 1cyd_A          161 KAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHP---------LRKFAEVEDVVNSILFLLSDRSASTS  231 (244)
T ss_dssp             HHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHST---------TSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCC---------ccCCCCHHHHHHHHHHHhCchhhccc
Confidence            42       579999999999998732100 01122233322221         2468999999999999997643  35


Q ss_pred             CceEEecCCccc
Q 021331          203 RQVFNISGEKYV  214 (314)
Q Consensus       203 ~~~~~i~~~~~~  214 (314)
                      |+.+++.++..+
T Consensus       232 G~~~~v~gG~~~  243 (244)
T 1cyd_A          232 GGGILVDAGYLA  243 (244)
T ss_dssp             SSEEEESTTGGG
T ss_pred             CCEEEECCCccC
Confidence            789999988644

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.80  E-value=8.1e-19  Score=146.84  Aligned_cols=187  Identities=17%  Similarity=0.177  Sum_probs=135.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.....              ..++.++.+|++|++++.++++..     ++|+
T Consensus        34 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   99 (260)
T 3un1_A           34 TGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA--------------DPDIHTVAGDISKPETADRIVREGIERFGRIDS   99 (260)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS--------------STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc--------------cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCE
Confidence            899999999999999999999999999865522              146889999999999988887643     7999


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||...                    .++.++++++    .  +..++|++||...+......+. ..|+.+|...+
T Consensus       100 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~-~~Y~~sKaa~~  178 (260)
T 3un1_A          100 LVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPS-ALASLTKGGLN  178 (260)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCC-HHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCcc-HHHHHHHHHHH
Confidence            999998632                    1233344433    2  5678999999766533222221 25888898888


Q ss_pred             HHHH----h---cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccC
Q 021331          130 SVLE----S---KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  202 (314)
Q Consensus       130 ~~~~----~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~  202 (314)
                      .+.+    +   .|+++.+++||.+++|......    ........+         ...+.+++|+|++++.+.......
T Consensus       179 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~----~~~~~~~~p---------~~r~~~~~dva~av~~L~~~~~it  245 (260)
T 3un1_A          179 AVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAET----HSTLAGLHP---------VGRMGEIRDVVDAVLYLEHAGFIT  245 (260)
T ss_dssp             HHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGG----HHHHHTTST---------TSSCBCHHHHHHHHHHHHHCTTCC
T ss_pred             HHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHH----HHHHhccCC---------CCCCcCHHHHHHHHHHhcccCCCC
Confidence            7764    2   4799999999999998543221    112222221         234678999999999986555557


Q ss_pred             CceEEecCCcccc
Q 021331          203 RQVFNISGEKYVT  215 (314)
Q Consensus       203 ~~~~~i~~~~~~s  215 (314)
                      |+++++.+|..++
T Consensus       246 G~~i~vdGG~~~~  258 (260)
T 3un1_A          246 GEILHVDGGQNAG  258 (260)
T ss_dssp             SCEEEESTTGGGC
T ss_pred             CcEEEECCCeecc
Confidence            8999999987553

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.80  E-value=1.7e-20  Score=160.71  Aligned_cols=211  Identities=17%  Similarity=0.203  Sum_probs=144.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+... ..++.++.+|++|++++.++++..     ++|
T Consensus        32 TGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id  106 (302)
T 1w6u_A           32 TGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATA-----EQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPN  106 (302)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999865422111     011111 356899999999999998888643     579


Q ss_pred             EEEEcCCCCc--------------------ccHHHHHHh----C--C-CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           75 VVYDINGREA--------------------DEVEPILDA----L--P-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~~~~~----~--~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      +|||+||...                    .++.+++++    +  . +..+||++||...+....   ....|+.+|..
T Consensus       107 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---~~~~Y~~sK~a  183 (302)
T 1w6u_A          107 IVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG---FVVPSASAKAG  183 (302)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT---TCHHHHHHHHH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCC---CcchhHHHHHH
Confidence            9999998531                    112233333    2  2 457999999976654322   22268999999


Q ss_pred             HHHHHHh-------cCCceEEEecCeeeCCCCCCchhH--HHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          128 TESVLES-------KGVNWTSLRPVYIYGPLNYNPVEE--WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       128 ~e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      .+.+.+.       ++++++++|||.++++........  .....+....+         ...+.+++|+|++++.++..
T Consensus       184 ~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~dva~~~~~l~~~  254 (302)
T 1w6u_A          184 VEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIP---------CGRLGTVEELANLAAFLCSD  254 (302)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCT---------TSSCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCC---------cCCCCCHHHHHHHHHHHcCC
Confidence            8887642       689999999999998732111100  11112222211         12477899999999999975


Q ss_pred             Cc--cCCceEEecCCccccHHHHHHHHHHHhC
Q 021331          199 EK--ASRQVFNISGEKYVTFDGLARACAKAAG  228 (314)
Q Consensus       199 ~~--~~~~~~~i~~~~~~s~~el~~~i~~~~g  228 (314)
                      +.  ..|++|++.++..+++.++++.+.+..|
T Consensus       255 ~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g  286 (302)
T 1w6u_A          255 YASWINGAVIKFDGGEEVLISGEFNDLRKVTK  286 (302)
T ss_dssp             GGTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred             cccccCCCEEEECCCeeeccCCccccchhhcc
Confidence            43  2688999999998898888887777655

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.80  E-value=1.6e-19  Score=151.21  Aligned_cols=197  Identities=14%  Similarity=0.199  Sum_probs=135.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        19 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   93 (260)
T 3awd_A           19 TGGAQNIGLACVTALAEAGARVIIADLDEAMATKAV-----EDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDI   93 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422110     111112356899999999999988887642     6999


Q ss_pred             EEEcCCCCc---------------------ccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA---------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~---------------------~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      |||+||...                     .++.++++++    .  +..++|++||...+......+. ..|+.+|...
T Consensus        94 vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~-~~Y~~sK~a~  172 (260)
T 3awd_A           94 LVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQ-AAYNASKAGV  172 (260)
T ss_dssp             EEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCC-HHHHHHHHHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCc-cccHHHHHHH
Confidence            999998532                     1122333332    2  5679999999765533221111 2699999988


Q ss_pred             HHHHHh-------cCCceEEEecCeeeCCCCC-CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          129 ESVLES-------KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       129 e~~~~~-------~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      +.+++.       ++++++++||+.++++... ......+...+....++         ..+++++|+|++++.++..+.
T Consensus       173 ~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~~  243 (260)
T 3awd_A          173 HQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPM---------GRVGQPDEVASVVQFLASDAA  243 (260)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTT---------SSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCc---------CCCCCHHHHHHHHHHHhCchh
Confidence            887642       6899999999999998532 11112223333332221         247889999999999997532


Q ss_pred             --cCCceEEecCCc
Q 021331          201 --ASRQVFNISGEK  212 (314)
Q Consensus       201 --~~~~~~~i~~~~  212 (314)
                        ..|++|++.++.
T Consensus       244 ~~~~G~~~~v~gg~  257 (260)
T 3awd_A          244 SLMTGAIVNVDAGF  257 (260)
T ss_dssp             TTCCSCEEEESTTT
T ss_pred             ccCCCcEEEECCce
Confidence              367899999885

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.79  E-value=2.9e-19  Score=151.19  Aligned_cols=210  Identities=16%  Similarity=0.169  Sum_probs=132.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhh---hhccCceEEEEecCCChhhHHHhhhcC-----C
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF---AEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~   72 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+   .....++.++.+|++|++++.++++..     +
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (278)
T 1spx_A           12 TGSSNGIGRATAVLFAREGAKVTITGRHAERLEETR-----QQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK   86 (278)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999865422110     001   011246889999999999888887643     7


Q ss_pred             ccEEEEcCCCCcc------------------------cH----HHHHHhCC-CCCcEEEEeecee-eccCCCCCccCccc
Q 021331           73 FDVVYDINGREAD------------------------EV----EPILDALP-NLEQFIYCSSAGV-YLKSDLLPHCESRH  122 (314)
Q Consensus        73 ~d~vi~~a~~~~~------------------------~~----~~~~~~~~-~~~~~i~~Ss~~v-~~~~~~~~~~e~~~  122 (314)
                      +|++||+||....                        ++    +.++..+. ...++|++||... +...   +....|+
T Consensus        87 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~~Y~  163 (278)
T 1spx_A           87 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHAT---PDFPYYS  163 (278)
T ss_dssp             CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCC---TTSHHHH
T ss_pred             CCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCC---CCccHHH
Confidence            9999999986321                        11    22223332 1379999999766 4322   2223689


Q ss_pred             cchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchh--HHH------HHHHHcCCCeecCCCCCceeeeeeHHH
Q 021331          123 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE--EWF------FHRLKAGRPIPIPGSGIQVTQLGHVKD  187 (314)
Q Consensus       123 ~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~D  187 (314)
                      .+|...+.+.+       .+++++++++||.+.++.......  ...      ...+....+         ...+.+++|
T Consensus       164 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~d  234 (278)
T 1spx_A          164 IAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVP---------AGVMGQPQD  234 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCT---------TSSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCC---------CcCCCCHHH
Confidence            99998887764       368999999999999874321100  000      111111111         124788999


Q ss_pred             HHHHHHHHhcCCc---cCCceEEecCCccccHHHHHHHHHHHh
Q 021331          188 LARAFVQVLGNEK---ASRQVFNISGEKYVTFDGLARACAKAA  227 (314)
Q Consensus       188 ~a~~~~~~l~~~~---~~~~~~~i~~~~~~s~~el~~~i~~~~  227 (314)
                      +|++++.++..+.   ..|.++++.++..+++.|+++.+.+++
T Consensus       235 vA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          235 IAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             HHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             HHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            9999999997643   358899999999999999999988764

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.78  E-value=1.3e-19  Score=153.46  Aligned_cols=214  Identities=19%  Similarity=0.173  Sum_probs=149.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhcc---CceEEEEecCCChhhHHHhhhcC-----C
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS---SKILHLKGDRKDYDFVKSSLSAK-----G   72 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~d~~~l~~~~~~~-----~   72 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+....   .++.++.+|++|++++.++++..     +
T Consensus        17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   91 (281)
T 3svt_A           17 TGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAV-----QELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGR   91 (281)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            799999999999999999999999999875532111     0111111   27889999999999988888643     6


Q ss_pred             ccEEEEcCCCC-c--------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           73 FDVVYDINGRE-A--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        73 ~d~vi~~a~~~-~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      +|++||+||.. .                    .++.+++++    +.  +..+||++||...+....   ....|+.+|
T Consensus        92 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~asK  168 (281)
T 3svt_A           92 LHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHR---WFGAYGVTK  168 (281)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT---TCTHHHHHH
T ss_pred             CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCC---CChhHHHHH
Confidence            89999999961 1                    112233333    22  445899999977664322   223699999


Q ss_pred             hhHHHHHH-------hcCCceEEEecCeeeCCCCCCc-hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          126 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       126 ~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      ...+.+.+       .+++++.+++||.+.++..... .............++         ..+.+++|+|++++.++.
T Consensus       169 ~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva~~~~~l~s  239 (281)
T 3svt_A          169 SAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPL---------PRQGEVEDVANMAMFLLS  239 (281)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSS---------SSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhC
Confidence            98888764       3569999999999988732110 001112222222221         246679999999999998


Q ss_pred             CCc--cCCceEEecCCcccc-HHHHHHHHHHHhCCCC
Q 021331          198 NEK--ASRQVFNISGEKYVT-FDGLARACAKAAGFPE  231 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~~~s-~~el~~~i~~~~g~~~  231 (314)
                      ...  ..|+++++.+|..++ ..++++.+.+.+|.+.
T Consensus       240 ~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~  276 (281)
T 3svt_A          240 DAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA  276 (281)
T ss_dssp             GGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred             cccCCCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence            643  268999999998877 7789999999998653

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.78  E-value=5.7e-19  Score=147.00  Aligned_cols=195  Identities=15%  Similarity=0.250  Sum_probs=134.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhh-hhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+ .....++.++.+|++|++++.++++..     ++|
T Consensus         8 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (250)
T 2cfc_A            8 TGASSGNGLAIATRFLARGDRVAALDLSAETLEETA-----RTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAID   82 (250)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999999865422110     001 111356899999999999988887643     799


Q ss_pred             EEEEcCCCCcc-----------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           75 VVYDINGREAD-----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        75 ~vi~~a~~~~~-----------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      +|||+||....                       +    ++.++..+.  +.+++|++||...+...   +....|+.+|
T Consensus        83 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---~~~~~Y~~sK  159 (250)
T 2cfc_A           83 VLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF---PGRSAYTTSK  159 (250)
T ss_dssp             EEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---TTCHHHHHHH
T ss_pred             EEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC---CCchhHHHHH
Confidence            99999985311                       0    123344443  56899999997765432   2222689999


Q ss_pred             hhHHHHHHh-------cCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          126 LNTESVLES-------KGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       126 ~~~e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      ...+.+.+.       .+++++++||+.++++...... ...+...+....+         ...+.+.+|+|++++.++.
T Consensus       160 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~  230 (250)
T 2cfc_A          160 GAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIP---------QKEIGTAAQVADAVMFLAG  230 (250)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCT---------TCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcC
Confidence            988877642       4899999999999998532101 1122222322221         1247789999999999998


Q ss_pred             CCc--cCCceEEecCCc
Q 021331          198 NEK--ASRQVFNISGEK  212 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~  212 (314)
                      .+.  ..|+++++.++.
T Consensus       231 ~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          231 EDATYVNGAALVMDGAY  247 (250)
T ss_dssp             TTCTTCCSCEEEESTTG
T ss_pred             chhhcccCCEEEECCce
Confidence            643  358899998875

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.78  E-value=6e-19  Score=146.08  Aligned_cols=186  Identities=16%  Similarity=0.170  Sum_probs=133.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC----CccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~----~~d~v   76 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.                 ..+.++.+|++|++++.++++..    ++|++
T Consensus         8 tGasggiG~~la~~l~~~G~~V~~~~r~~~~-----------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~l   70 (242)
T 1uay_A            8 TGGASGLGRAAALALKARGYRVVVLDLRREG-----------------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   70 (242)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEccCccc-----------------cceEEEeCCCCCHHHHHHHHHHHHhhCCceEE
Confidence            7999999999999999999999999998651                 34678999999999998888643    78999


Q ss_pred             EEcCCCCc------------------------ccHHHHHHhC----CCC--------CcEEEEeeceeeccCCCCCccCc
Q 021331           77 YDINGREA------------------------DEVEPILDAL----PNL--------EQFIYCSSAGVYLKSDLLPHCES  120 (314)
Q Consensus        77 i~~a~~~~------------------------~~~~~~~~~~----~~~--------~~~i~~Ss~~v~~~~~~~~~~e~  120 (314)
                      ||+||...                        .++.++++++    ...        .+||++||...+.....   ...
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---~~~  147 (242)
T 1uay_A           71 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG---QAA  147 (242)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTT---CHH
T ss_pred             EEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCC---Cch
Confidence            99998632                        1122333332    221        28999999887754321   226


Q ss_pred             cccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHH
Q 021331          121 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  193 (314)
Q Consensus       121 ~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  193 (314)
                      |+.+|...+.+.+       ..+++++++||+.++++.... ....+...+....+  +.      ..+++++|+|++++
T Consensus       148 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~--~~------~~~~~~~dva~~~~  218 (242)
T 1uay_A          148 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG-LPEKAKASLAAQVP--FP------PRLGRPEEYAALVL  218 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT-SCHHHHHHHHTTCC--SS------CSCCCHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc-cchhHHHHHHhhCC--Cc------ccCCCHHHHHHHHH
Confidence            8999988777653       248999999999999874211 11222233332221  10      24778999999999


Q ss_pred             HHhcCCccCCceEEecCCcccc
Q 021331          194 QVLGNEKASRQVFNISGEKYVT  215 (314)
Q Consensus       194 ~~l~~~~~~~~~~~i~~~~~~s  215 (314)
                      .++.++...|+.|++.++..++
T Consensus       219 ~l~~~~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          219 HILENPMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             HHHHCTTCCSCEEEESTTCCCC
T ss_pred             HHhcCCCCCCcEEEEcCCeecC
Confidence            9998755578899999987654

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.78  E-value=4e-19  Score=149.33  Aligned_cols=197  Identities=13%  Similarity=0.122  Sum_probs=123.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc------CCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~------~~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++.      -++|
T Consensus        20 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   94 (266)
T 1xq1_A           20 TGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECL-----SKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD   94 (266)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCc
Confidence            799999999999999999999999999865422111     11111234688999999999988888753      3789


Q ss_pred             EEEEcCCCCc--------------------ccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +|||+||...                    .++.++++++    .  +.+++|++||...+....   ....|+.+|...
T Consensus        95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---~~~~Y~~sK~a~  171 (266)
T 1xq1_A           95 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSAS---VGSIYSATKGAL  171 (266)
T ss_dssp             EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------------CCHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCC---CCchHHHHHHHH
Confidence            9999998632                    1233444444    2  668999999987764322   222689999988


Q ss_pred             HHHHHh-------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          129 ESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       129 e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      +.+.+.       .+++++++||+.++++.........+......         ......+++++|+|++++.++..+. 
T Consensus       172 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~l~~~~~~  242 (266)
T 1xq1_A          172 NQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVIS---------RKPLGRFGEPEEVSSLVAFLCMPAAS  242 (266)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHcCcccc
Confidence            877642       48999999999999985322110111111111         1112357899999999999987532 


Q ss_pred             -cCCceEEecCCccc
Q 021331          201 -ASRQVFNISGEKYV  214 (314)
Q Consensus       201 -~~~~~~~i~~~~~~  214 (314)
                       ..|+++++.++..+
T Consensus       243 ~~~G~~~~v~gG~~~  257 (266)
T 1xq1_A          243 YITGQTICVDGGLTV  257 (266)
T ss_dssp             TCCSCEEECCCCEEE
T ss_pred             CccCcEEEEcCCccc
Confidence             36889999998653

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.78  E-value=5.3e-19  Score=147.48  Aligned_cols=195  Identities=16%  Similarity=0.226  Sum_probs=112.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        15 TGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   89 (253)
T 3qiv_A           15 TGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVA-----KQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDY   89 (253)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999876532111     122222467889999999999888887643     7999


Q ss_pred             EEEcCCCC---c--------------------cc----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchh
Q 021331           76 VYDINGRE---A--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKL  126 (314)
Q Consensus        76 vi~~a~~~---~--------------------~~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~  126 (314)
                      +||+||..   .                    .+    ++.++..+.  +..+||++||...+...      ..|+.+|.
T Consensus        90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------~~Y~asK~  163 (253)
T 3qiv_A           90 LVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYS------NYYGLAKV  163 (253)
T ss_dssp             EEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------CCHH
T ss_pred             EEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCCC------chhHHHHH
Confidence            99999862   1                    11    233444443  56789999998877321      25899999


Q ss_pred             hHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          127 NTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       127 ~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      ..+.+.+       ..++++..++||.++++.........+...+...         .....+.+++|+|++++.++...
T Consensus       164 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~s~~  234 (253)
T 3qiv_A          164 GINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKG---------LPLSRMGTPDDLVGMCLFLLSDE  234 (253)
T ss_dssp             HHHHHHHHHHHHTTTTTEEEEEEEC----------------------------------------CCHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhcc---------CCCCCCCCHHHHHHHHHHHcCcc
Confidence            8877763       2479999999999998743221111111211111         12234667899999999999764


Q ss_pred             c--cCCceEEecCCcccc
Q 021331          200 K--ASRQVFNISGEKYVT  215 (314)
Q Consensus       200 ~--~~~~~~~i~~~~~~s  215 (314)
                      .  ..|++|++.+|..++
T Consensus       235 ~~~~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          235 ASWITGQIFNVDGGQIIR  252 (253)
T ss_dssp             GTTCCSCEEEC-------
T ss_pred             ccCCCCCEEEECCCeecC
Confidence            3  268999999987554

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.78  E-value=3e-19  Score=149.49  Aligned_cols=202  Identities=17%  Similarity=0.207  Sum_probs=137.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......        .+...++.++.+|++|++++.+++++.     ++|+
T Consensus        14 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   85 (259)
T 4e6p_A           14 TGSARGIGRAFAEAYVREGATVAIADIDIERARQAA--------AEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI   85 (259)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865532111        111356889999999999888887643     7999


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhCC------C-CCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA--------------------DEVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~~------~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||...                    .++.++++++.      + ..++|++||...+...   +....|+.+|...
T Consensus        86 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asK~a~  162 (259)
T 4e6p_A           86 LVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE---ALVAIYCATKAAV  162 (259)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---TTBHHHHHHHHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC---CCChHHHHHHHHH
Confidence            999999632                    12233444332      2 4689999997665322   2223699999988


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcC---CCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG---RPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      +.+.+       ..++++.+++||.+++|....  ...+.......   ......+.......+.+++|+|++++.++..
T Consensus       163 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~  240 (259)
T 4e6p_A          163 ISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG--VDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASA  240 (259)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHH--HHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSG
T ss_pred             HHHHHHHHHHhhhcCCEEEEEEECCCccchhhh--hhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCC
Confidence            87764       348999999999999984211  11111111111   0011111222335688999999999999875


Q ss_pred             Cc--cCCceEEecCCcccc
Q 021331          199 EK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       199 ~~--~~~~~~~i~~~~~~s  215 (314)
                      ..  ..|++|++.+|..+|
T Consensus       241 ~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          241 ESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             GGTTCCSCEEEESTTSSCC
T ss_pred             ccCCCCCCEEEECcChhcC
Confidence            33  258999999997654

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.78  E-value=2.9e-19  Score=149.93  Aligned_cols=199  Identities=14%  Similarity=0.156  Sum_probs=135.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+... ..++.++.+|++|++++.++++..     ++|
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (263)
T 3ai3_A           13 TGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAA-----RSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGAD   87 (263)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999865422110     011111 246889999999999888887643     799


Q ss_pred             EEEEcCCCCc--------------------ccH----HHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREA--------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~~----~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      ++||+||...                    .++    +.++..+.  +..++|++||...+....   ....|..+|...
T Consensus        88 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~~sK~a~  164 (263)
T 3ai3_A           88 ILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLW---YEPIYNVTKAAL  164 (263)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---TCHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC---CcchHHHHHHHH
Confidence            9999998632                    112    22333333  567999999987765322   223689999888


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCch----------hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHH
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  191 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  191 (314)
                      +.+.+       .++++++++||+.+++|......          .......+....        .....+.+++|+|++
T Consensus       165 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~p~~~~~~~~dvA~~  236 (263)
T 3ai3_A          165 MMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEH--------APIKRFASPEELANF  236 (263)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHH--------CTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcC--------CCCCCCcCHHHHHHH
Confidence            87764       26899999999999987311000          001111111110        011357899999999


Q ss_pred             HHHHhcCCc--cCCceEEecCCcccc
Q 021331          192 FVQVLGNEK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       192 ~~~~l~~~~--~~~~~~~i~~~~~~s  215 (314)
                      ++.++..+.  ..|++|++.++..+|
T Consensus       237 ~~~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          237 FVFLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             HHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             HHHHcCccccCCCCcEEEECCCcccc
Confidence            999997643  358899999987655

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.77  E-value=1.7e-18  Score=143.81  Aligned_cols=196  Identities=17%  Similarity=0.226  Sum_probs=137.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.......+.    ..+.....++.++.+|++|++++++++++.     ++|+
T Consensus        10 TGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   85 (246)
T 3osu_A           10 TGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVV----EEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDV   85 (246)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            8999999999999999999999998886533211110    122222457889999999999988887643     7999


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||...                    .++.++++++    .  +..++|++||...+....   ....|+.+|...+
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~~sK~a~~  162 (246)
T 3osu_A           86 LVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNP---GQANYVATKAGVI  162 (246)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT---TCHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCC---CChHHHHHHHHHH
Confidence            999999632                    1233444443    2  567999999976553322   2226999998877


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       .+++++..++||.+.++.... +.......+....++         ..+.+.+|+|++++.++..+.  
T Consensus       163 ~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~~~dva~~v~~l~s~~~~~  232 (246)
T 3osu_A          163 GLTKSAARELASRGITVNAVAPGFIVSDMTDA-LSDELKEQMLTQIPL---------ARFGQDTDIANTVAFLASDKAKY  232 (246)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBGGGCCSC-SCHHHHHHHHTTCTT---------CSCBCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHhcccCeEEEEEEECCCcCCcccc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCccccC
Confidence            7653       468999999999999885322 333444444433322         246678999999999987643  


Q ss_pred             cCCceEEecCCcc
Q 021331          201 ASRQVFNISGEKY  213 (314)
Q Consensus       201 ~~~~~~~i~~~~~  213 (314)
                      ..|+++++.+|..
T Consensus       233 itG~~i~vdgG~~  245 (246)
T 3osu_A          233 ITGQTIHVNGGMY  245 (246)
T ss_dssp             CCSCEEEESTTSC
T ss_pred             CCCCEEEeCCCcc
Confidence            2589999998853

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.77  E-value=1.2e-18  Score=144.46  Aligned_cols=193  Identities=12%  Similarity=0.117  Sum_probs=133.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-CccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi~~   79 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......         +...+++++.+|++|++++.++++.. ++|+|||+
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---------~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 3d3w_A           13 TGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLV---------RECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---------HHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---------HHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEEC
Confidence            799999999999999999999999999865422111         01135678899999999999998744 58999999


Q ss_pred             CCCCcc--------------------cHHHHHHh----CC--C-CCcEEEEeeceeeccCCCCCccCccccchhhHHHHH
Q 021331           80 NGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVL  132 (314)
Q Consensus        80 a~~~~~--------------------~~~~~~~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~  132 (314)
                      ||....                    ++.++.++    +.  + ..++|++||...+...   +....|+.+|...|.+.
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---~~~~~Y~~sK~a~~~~~  160 (244)
T 3d3w_A           84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV---TNHSVYCSTKGALDMLT  160 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC---TTBHHHHHHHHHHHHHH
T ss_pred             CccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC---CCCchHHHHHHHHHHHH
Confidence            986321                    12223333    22  3 5789999998765432   22236999999998876


Q ss_pred             Hh-------cCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cC
Q 021331          133 ES-------KGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--AS  202 (314)
Q Consensus       133 ~~-------~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~  202 (314)
                      +.       .+++++++||+.++++...... ............         ....+++++|+|++++.++.++.  ..
T Consensus       161 ~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (244)
T 3d3w_A          161 KVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRI---------PLGKFAEVEHVVNAILFLLSDRSGMTT  231 (244)
T ss_dssp             HHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTC---------TTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhC---------CCCCCcCHHHHHHHHHHHcCccccCCC
Confidence            42       5799999999999987421000 001112222211         12358899999999999997642  36


Q ss_pred             CceEEecCCccc
Q 021331          203 RQVFNISGEKYV  214 (314)
Q Consensus       203 ~~~~~i~~~~~~  214 (314)
                      |++|++.++...
T Consensus       232 G~~~~v~gG~~~  243 (244)
T 3d3w_A          232 GSTLPVEGGFWA  243 (244)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCEEEECCCccC
Confidence            889999988644

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.76  E-value=4.4e-19  Score=148.87  Aligned_cols=200  Identities=16%  Similarity=0.154  Sum_probs=128.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhcc-------CceEEEEecCCChhhHHHhhhcC--
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-------SKILHLKGDRKDYDFVKSSLSAK--   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~d~~~l~~~~~~~--   71 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......     .+....       .++.++.+|++|++++.++++..  
T Consensus        13 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (264)
T 2pd6_A           13 TGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVR-----LLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQA   87 (264)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----TC------------CCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-----HHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            7999999999999999999999999998654321100     000001       46889999999999988888632  


Q ss_pred             ---Cc-cEEEEcCCCCc--------------------ccHHHHHHhCC------C-CCcEEEEeeceeeccCCCCCccCc
Q 021331           72 ---GF-DVVYDINGREA--------------------DEVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCES  120 (314)
Q Consensus        72 ---~~-d~vi~~a~~~~--------------------~~~~~~~~~~~------~-~~~~i~~Ss~~v~~~~~~~~~~e~  120 (314)
                         ++ |+|||+||...                    .++.++++++.      + ..+||++||...+...   +....
T Consensus        88 ~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~  164 (264)
T 2pd6_A           88 CFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN---VGQTN  164 (264)
T ss_dssp             HHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC---TTBHH
T ss_pred             HhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC---CCChh
Confidence               34 99999998632                    12334444432      3 5689999997554322   12226


Q ss_pred             cccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHH
Q 021331          121 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  193 (314)
Q Consensus       121 ~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  193 (314)
                      |+.+|...+.+.+       ..+++++++||+.++++.... ....+...+...         .....+.+++|+|++++
T Consensus       165 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~  234 (264)
T 2pd6_A          165 YAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK-VPQKVVDKITEM---------IPMGHLGDPEDVADVVA  234 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-----------CTGGG---------CTTCSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh-cCHHHHHHHHHh---------CCCCCCCCHHHHHHHHH
Confidence            8999998777653       268999999999999985321 111111111111         11134778999999999


Q ss_pred             HHhcCCc--cCCceEEecCCccccHHH
Q 021331          194 QVLGNEK--ASRQVFNISGEKYVTFDG  218 (314)
Q Consensus       194 ~~l~~~~--~~~~~~~i~~~~~~s~~e  218 (314)
                      .++..+.  ..|+.+++.++..++...
T Consensus       235 ~l~~~~~~~~~G~~~~v~gg~~~~~~~  261 (264)
T 2pd6_A          235 FLASEDSGYITGTSVEVTGGLFMAENL  261 (264)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC------
T ss_pred             HHcCCcccCCCCCEEEECCCceecccc
Confidence            9997532  368899999998766544

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.76  E-value=7.1e-19  Score=148.42  Aligned_cols=195  Identities=18%  Similarity=0.167  Sum_probs=131.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcC-CcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+ ........     ..+.....++.++.+|++|++++.++++..     ++|
T Consensus        27 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d  101 (274)
T 1ja9_A           27 TGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVV-----AELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLD  101 (274)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEE
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999994 33211100     112222356889999999999988887643     799


Q ss_pred             EEEEcCCCCc--------------------ccHHHHHHh----CCCCCcEEEEeeceee-ccCCCCCccCccccchhhHH
Q 021331           75 VVYDINGREA--------------------DEVEPILDA----LPNLEQFIYCSSAGVY-LKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~~~~~----~~~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +|||+||...                    .++.+++++    +....+||++||...+ ...   +....|+.+|...+
T Consensus       102 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~---~~~~~Y~~sK~a~~  178 (274)
T 1ja9_A          102 FVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI---PNHALYAGSKAAVE  178 (274)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC---CSCHHHHHHHHHHH
T ss_pred             EEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCC---CCCchHHHHHHHHH
Confidence            9999998632                    122333333    3322699999998776 322   22236999999988


Q ss_pred             HHHHh-------cCCceEEEecCeeeCCCCCC-----------chh-HHHHHHHHcCCCeecCCCCCceeeeeeHHHHHH
Q 021331          130 SVLES-------KGVNWTSLRPVYIYGPLNYN-----------PVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  190 (314)
Q Consensus       130 ~~~~~-------~~~~~~ilR~~~v~g~~~~~-----------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  190 (314)
                      .+.+.       .+++++++||+.++++....           ... .........+         .....+++++|+|+
T Consensus       179 ~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~  249 (274)
T 1ja9_A          179 GFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANM---------NPLKRIGYPADIGR  249 (274)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHT---------STTSSCBCHHHHHH
T ss_pred             HHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhc---------CCCCCccCHHHHHH
Confidence            87643       48999999999998762110           000 1111111111         12245889999999


Q ss_pred             HHHHHhcCCc--cCCceEEecCCc
Q 021331          191 AFVQVLGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       191 ~~~~~l~~~~--~~~~~~~i~~~~  212 (314)
                      +++.++..+.  ..|++|++.+|.
T Consensus       250 ~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          250 AVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHhCcccccccCcEEEecCCc
Confidence            9999997643  268899998874

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.76  E-value=1.4e-18  Score=144.38  Aligned_cols=193  Identities=17%  Similarity=0.228  Sum_probs=124.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEE-EcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|+++ .|+........     ..+.....++.++.+|++|+++++++++..     ++|
T Consensus        11 tGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   85 (247)
T 2hq1_A           11 TGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATA-----EEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRID   85 (247)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHH-----HHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            7999999999999999999999999 45543321100     111112356889999999999988887643     799


Q ss_pred             EEEEcCCCCc--------------------ccH----HHHHHhCC--CCCcEEEEeec-eeeccCCCCCccCccccchhh
Q 021331           75 VVYDINGREA--------------------DEV----EPILDALP--NLEQFIYCSSA-GVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~~----~~~~~~~~--~~~~~i~~Ss~-~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      +|||+||...                    .++    +.++..+.  +..+||++||. +.++...    ...|+.+|..
T Consensus        86 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~Y~~sK~a  161 (247)
T 2hq1_A           86 ILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAG----QANYAASKAG  161 (247)
T ss_dssp             EEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------CHHHHHHHHH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC----CcHhHHHHHH
Confidence            9999998632                    112    22333332  56799999996 4454322    2268999998


Q ss_pred             HHHHHHh-------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          128 TESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       128 ~e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.+.+.       .++++++++|+.+.++.... +............+         ...+++++|+|++++.++..+.
T Consensus       162 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~  231 (247)
T 2hq1_A          162 LIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV-LPDKVKEMYLNNIP---------LKRFGTPEEVANVVGFLASDDS  231 (247)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHTTST---------TSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh-cchHHHHHHHhhCC---------CCCCCCHHHHHHHHHHHcCccc
Confidence            8877642       47999999999987752110 11112222222211         1347899999999999987642


Q ss_pred             --cCCceEEecCCc
Q 021331          201 --ASRQVFNISGEK  212 (314)
Q Consensus       201 --~~~~~~~i~~~~  212 (314)
                        ..|++|++.++.
T Consensus       232 ~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          232 NYITGQVINIDGGL  245 (247)
T ss_dssp             TTCCSCEEEESTTC
T ss_pred             ccccCcEEEeCCCc
Confidence              357899999875

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.76  E-value=5.7e-19  Score=147.66  Aligned_cols=195  Identities=19%  Similarity=0.242  Sum_probs=134.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcC-CcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+ .+......     ..+.....++.++.+|++|++++.++++..     ++|
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (258)
T 3afn_B           13 TGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETI-----ASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGID   87 (258)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHH-----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999998 44321110     111112357889999999999998888643     799


Q ss_pred             EEEEcCCC-Cc--------------------ccHHHHHH----hCC--C--C---CcEEEEeeceeeccCCCCCccCccc
Q 021331           75 VVYDINGR-EA--------------------DEVEPILD----ALP--N--L---EQFIYCSSAGVYLKSDLLPHCESRH  122 (314)
Q Consensus        75 ~vi~~a~~-~~--------------------~~~~~~~~----~~~--~--~---~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (314)
                      +|||+||. ..                    .++.++++    .+.  +  .   .++|++||...+...  .+....|+
T Consensus        88 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--~~~~~~Y~  165 (258)
T 3afn_B           88 VLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG--GPGAGLYG  165 (258)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC--CTTCHHHH
T ss_pred             EEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC--CCCchHHH
Confidence            99999986 21                    01122222    222  2  2   689999997665411  12223699


Q ss_pred             cchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHH
Q 021331          123 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  195 (314)
Q Consensus       123 ~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  195 (314)
                      .+|...+.+.+       ..+++++++||+.++++.... ....+...+..+.+         ...+++++|+|++++.+
T Consensus       166 ~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l  235 (258)
T 3afn_B          166 AAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD-KTQDVRDRISNGIP---------MGRFGTAEEMAPAFLFF  235 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT-CCHHHHHHHHTTCT---------TCSCBCGGGTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc-cCHHHHHHHhccCC---------CCcCCCHHHHHHHHHHH
Confidence            99999888764       248999999999999985322 12233333333222         13578999999999999


Q ss_pred             hcCCc---cCCceEEecCCc
Q 021331          196 LGNEK---ASRQVFNISGEK  212 (314)
Q Consensus       196 l~~~~---~~~~~~~i~~~~  212 (314)
                      +.++.   ..|++|++.++.
T Consensus       236 ~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          236 ASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             HCHHHHTTCCSEEEEESTTS
T ss_pred             hCcchhccccCCEEeECCCc
Confidence            97642   258899999876

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.76  E-value=1.5e-18  Score=144.51  Aligned_cols=195  Identities=18%  Similarity=0.188  Sum_probs=133.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......     .+.. ..++.++.+|++|++++.++++..     ++|+
T Consensus        12 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (251)
T 1zk4_A           12 TGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAK-----SVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST   85 (251)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----Hhhc-cCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998654221100     0000 146889999999999988888632     5999


Q ss_pred             EEEcCCCCcc------------------------cHHHHHHhCC--CC-CcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREAD------------------------EVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~------------------------~~~~~~~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      |||+||....                        .++.+++.+.  +. .+||++||...+....   ....|+.+|...
T Consensus        86 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---~~~~Y~~sK~a~  162 (251)
T 1zk4_A           86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP---SLGAYNASKGAV  162 (251)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT---TCHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCC---CCccchHHHHHH
Confidence            9999986321                        1234555555  44 7999999987664322   222689999888


Q ss_pred             HHHHH---------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          129 ESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       129 e~~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      +.+.+         ..+++++++||+.++++.... ........ ....       ......+++++|+|++++.++..+
T Consensus       163 ~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~-~~~~-------~~~~~~~~~~~dva~~~~~l~~~~  233 (251)
T 1zk4_A          163 RIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD-LPGAEEAM-SQRT-------KTPMGHIGEPNDIAYICVYLASNE  233 (251)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT-STTHHHHH-TSTT-------TCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhh-cCchhhhH-HHhh-------cCCCCCCcCHHHHHHHHHHHcCcc
Confidence            77653         457999999999999873211 00000000 0001       111234789999999999999764


Q ss_pred             c--cCCceEEecCCcc
Q 021331          200 K--ASRQVFNISGEKY  213 (314)
Q Consensus       200 ~--~~~~~~~i~~~~~  213 (314)
                      .  ..|+++++.++..
T Consensus       234 ~~~~~G~~~~v~gG~~  249 (251)
T 1zk4_A          234 SKFATGSEFVVDGGYT  249 (251)
T ss_dssp             GTTCCSCEEEESTTGG
T ss_pred             cccccCcEEEECCCcc
Confidence            3  3688999999864

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.76  E-value=3.8e-18  Score=141.78  Aligned_cols=196  Identities=16%  Similarity=0.157  Sum_probs=136.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|+++++++++..     ++|+
T Consensus        11 TGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (247)
T 3lyl_A           11 TGASRGIGFEVAHALASKGATVVGTATSQASAEKFE-----NSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDI   85 (247)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999876532111     122222357899999999999988887643     5899


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||....                    ++.++++.    +.  +..++|++||...+....   ....|+.+|...+
T Consensus        86 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~~sK~a~~  162 (247)
T 3lyl_A           86 LVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNP---GQTNYCAAKAGVI  162 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT---TCHHHHHHHHHHH
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC---CcHHHHHHHHHHH
Confidence            9999997421                    12233333    22  456999999976654322   2236899998776


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       ..++++..++||.+.++.... .............         ....+.+++|+|++++.++....  
T Consensus       163 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~dva~~i~~l~s~~~~~  232 (247)
T 3lyl_A          163 GFSKSLAYEVASRNITVNVVAPGFIATDMTDK-LTDEQKSFIATKI---------PSGQIGEPKDIAAAVAFLASEEAKY  232 (247)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCTTTTT-SCHHHHHHHHTTS---------TTCCCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHcCeEEEEEeeCcEecccchh-ccHHHHHHHhhcC---------CCCCCcCHHHHHHHHHHHhCCCcCC
Confidence            6653       358999999999998874322 2222222222211         12357889999999999997643  


Q ss_pred             cCCceEEecCCccc
Q 021331          201 ASRQVFNISGEKYV  214 (314)
Q Consensus       201 ~~~~~~~i~~~~~~  214 (314)
                      ..|+++++.+|..+
T Consensus       233 ~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          233 ITGQTLHVNGGMYM  246 (247)
T ss_dssp             CCSCEEEESTTSSC
T ss_pred             ccCCEEEECCCEec
Confidence            36899999998754

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.75  E-value=1e-18  Score=145.88  Aligned_cols=199  Identities=15%  Similarity=0.132  Sum_probs=137.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|+++++++++..     ++|+
T Consensus        18 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   92 (256)
T 3gaf_A           18 TGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVA-----AAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITV   92 (256)
T ss_dssp             CSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999875432111     122223467899999999999888887643     7999


Q ss_pred             EEEcCCCCcc-------------------cHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           76 VYDINGREAD-------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        76 vi~~a~~~~~-------------------~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      +||+||....                   ++.+++++    +.  +..++|++||...+...   +....|+.+|...+.
T Consensus        93 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asKaa~~~  169 (256)
T 3gaf_A           93 LVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTN---VRMASYGSSKAAVNH  169 (256)
T ss_dssp             EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCC---TTCHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCC---CCchHHHHHHHHHHH
Confidence            9999986321                   12233333    32  45699999997765332   222369999988887


Q ss_pred             HHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--c
Q 021331          131 VLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--A  201 (314)
Q Consensus       131 ~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~  201 (314)
                      +.+       ..++++..++||.+.++.............+....+         ...+.+++|+|++++.++....  .
T Consensus       170 ~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p---------~~r~~~~~dva~~~~~L~s~~~~~i  240 (256)
T 3gaf_A          170 LTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTP---------LGRLGEAQDIANAALFLCSPAAAWI  240 (256)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCT---------TSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHcCCcccCc
Confidence            764       357999999999988762110001112222222221         2347789999999999997532  3


Q ss_pred             CCceEEecCCccccH
Q 021331          202 SRQVFNISGEKYVTF  216 (314)
Q Consensus       202 ~~~~~~i~~~~~~s~  216 (314)
                      .|+++++.+|...++
T Consensus       241 tG~~i~vdgG~~~~~  255 (256)
T 3gaf_A          241 SGQVLTVSGGGVQEL  255 (256)
T ss_dssp             CSCEEEESTTSCCC-
T ss_pred             cCCEEEECCCccccC
Confidence            689999999986654

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.75  E-value=5.8e-18  Score=143.36  Aligned_cols=212  Identities=15%  Similarity=0.128  Sum_probs=137.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCc-------hhhhhccCceEEEEecCCChhhHHHhhhcC--
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~--   71 (314)
                      |||+|+||.++++.|+++|++|++++|+.............       ..+.....++.++.+|++|+++++++++..  
T Consensus        16 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   95 (281)
T 3s55_A           16 TGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVAEAED   95 (281)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            79999999999999999999999999975431111100000       112223467899999999999988887643  


Q ss_pred             ---CccEEEEcCCCCc--------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccc
Q 021331           72 ---GFDVVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRH  122 (314)
Q Consensus        72 ---~~d~vi~~a~~~~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (314)
                         ++|++||+||...                    .++.+++++    +.  +..++|++||...+....   ....|+
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~  172 (281)
T 3s55_A           96 TLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANF---AQASYV  172 (281)
T ss_dssp             HHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCT---TCHHHH
T ss_pred             hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCC---CCchhH
Confidence               7999999999632                    122333333    32  567999999977653322   222699


Q ss_pred             cchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCe-----ecCCCCCceeeeeeHHHHHH
Q 021331          123 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-----PIPGSGIQVTQLGHVKDLAR  190 (314)
Q Consensus       123 ~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~~D~a~  190 (314)
                      .+|...+.+.+       .+|+++..++||.|++|..........+.........     .+.........+.+++|+|+
T Consensus       173 asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~  252 (281)
T 3s55_A          173 SSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLKPEEVTR  252 (281)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCCCCHHHHHH
Confidence            99988877764       3589999999999999854321110000000000000     00000111246889999999


Q ss_pred             HHHHHhcCCc--cCCceEEecCCcccc
Q 021331          191 AFVQVLGNEK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       191 ~~~~~l~~~~--~~~~~~~i~~~~~~s  215 (314)
                      +++.++++..  ..|+++++.+|..++
T Consensus       253 ~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          253 AVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             HHHHHcCCcccCCCCCEEEECCCcccC
Confidence            9999998643  368999999997654

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.75  E-value=5.4e-18  Score=141.54  Aligned_cols=199  Identities=17%  Similarity=0.212  Sum_probs=134.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+...       ...+.....++.++.+|++|++++.++++..     ++|+
T Consensus        10 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~-------~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (255)
T 2q2v_A           10 TGSTSGIGLGIAQVLARAGANIVLNGFGDPAPA-------LAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI   82 (255)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHH-------HHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHH-------HHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999998765210       0111111346888999999999988887643     7999


Q ss_pred             EEEcCCCCcc------------------------cHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~------------------------~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||....                        .++.++..+.  +..++|++||...+...   +....|..+|...+
T Consensus        83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~~sK~a~~  159 (255)
T 2q2v_A           83 LVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGS---TGKAAYVAAKHGVV  159 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC---TTBHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCC---CCchhHHHHHHHHH
Confidence            9999986321                        1334444444  56799999997765432   22236899998887


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHH-HHHcCC-C----eecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH-RLKAGR-P----IPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~-~~~~~~-~----~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      .+.+       .+++++++++|+.++++.     ...... ....+. .    ..+.........+++++|+|++++.++
T Consensus       160 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~  234 (255)
T 2q2v_A          160 GLTKVVGLETATSNVTCNAICPGWVLTPL-----VQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLC  234 (255)
T ss_dssp             HHHHHHHHHTTTSSEEEEEEEESSBCCHH-----HHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcccCcEEEEEeeCCCcCcc-----hhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHh
Confidence            7764       257999999999998873     111110 000000 0    000011122245889999999999998


Q ss_pred             cCCc--cCCceEEecCCccc
Q 021331          197 GNEK--ASRQVFNISGEKYV  214 (314)
Q Consensus       197 ~~~~--~~~~~~~i~~~~~~  214 (314)
                      ..+.  ..|++|++.++..+
T Consensus       235 s~~~~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          235 SEAGSQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CCccCCCCCCEEEECCCccC
Confidence            7643  25889999988643

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.75  E-value=1.2e-17  Score=139.38  Aligned_cols=194  Identities=14%  Similarity=0.185  Sum_probs=132.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCce-EEEEecCCChhhHHHhhhc----CCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSA----KGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~d~~~l~~~~~~----~~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......        .+...++ .++.+|++|++++.++++.    .++|+
T Consensus        17 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~   88 (254)
T 2wsb_A           17 TGAGSGIGLEICRAFAASGARLILIDREAAALDRAA--------QELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI   88 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence            799999999999999999999999999865422110        0112355 8899999999998888753    27999


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |||+||....                    +    ++.++..+.  +.++||++||...+......+. ..|+.+|...+
T Consensus        89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~-~~Y~~sK~a~~  167 (254)
T 2wsb_A           89 LVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFA-SSYMASKGAVH  167 (254)
T ss_dssp             EEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCB-HHHHHHHHHHH
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcc-hHHHHHHHHHH
Confidence            9999986321                    1    223333343  5789999999876643322211 26899999888


Q ss_pred             HHHHh-------cCCceEEEecCeeeCCCCCCc-hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          130 SVLES-------KGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       130 ~~~~~-------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      .+.+.       .+++++++||+.++++..... ........+....+         ...+++++|+|++++.++..+. 
T Consensus       168 ~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~  238 (254)
T 2wsb_A          168 QLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTP---------MGRCGEPSEIAAAALFLASPAAS  238 (254)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTST---------TSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCcccc
Confidence            77642       489999999999998731100 00112222222211         1347899999999999997532 


Q ss_pred             -cCCceEEecCCc
Q 021331          201 -ASRQVFNISGEK  212 (314)
Q Consensus       201 -~~~~~~~i~~~~  212 (314)
                       ..|+++++.++.
T Consensus       239 ~~~G~~~~v~gG~  251 (254)
T 2wsb_A          239 YVTGAILAVDGGY  251 (254)
T ss_dssp             TCCSCEEEESTTG
T ss_pred             cccCCEEEECCCE
Confidence             368899998875

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.75  E-value=3e-18  Score=142.42  Aligned_cols=194  Identities=14%  Similarity=0.174  Sum_probs=132.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh-ccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.. ...++.++.+|++|++++.+++++.     ++|
T Consensus        13 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   87 (248)
T 2pnf_A           13 TGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVA-----EEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGID   87 (248)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-----HHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            799999999999999999999999999865422110     01111 1246889999999999998888643     799


Q ss_pred             EEEEcCCCCc--------------------ccH----HHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREA--------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~~----~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +|||+||...                    .++    +.++..+.  +.++||++||...+....   ....|..+|...
T Consensus        88 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---~~~~Y~~sK~a~  164 (248)
T 2pnf_A           88 ILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNV---GQVNYSTTKAGL  164 (248)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCT---TCHHHHHHHHHH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCC---CCchHHHHHHHH
Confidence            9999998632                    112    22333333  567999999975443221   122588899888


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC--
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--  199 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~--  199 (314)
                      +.+.+       ..+++++++||+.++++.... +............+         ...+++++|+|++++.++...  
T Consensus       165 ~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~  234 (248)
T 2pnf_A          165 IGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV-LSEEIKQKYKEQIP---------LGRFGSPEEVANVVLFLCSELAS  234 (248)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-SCHHHHHHHHHTCT---------TSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHhcccCeEEEEEEeceecCchhhh-ccHHHHHHHHhcCC---------CCCccCHHHHHHHHHHHhCchhh
Confidence            77754       357999999999999874321 11222222222211         124789999999999999763  


Q ss_pred             ccCCceEEecCCc
Q 021331          200 KASRQVFNISGEK  212 (314)
Q Consensus       200 ~~~~~~~~i~~~~  212 (314)
                      ...|++|++.++.
T Consensus       235 ~~~G~~~~v~gg~  247 (248)
T 2pnf_A          235 YITGEVIHVNGGM  247 (248)
T ss_dssp             TCCSCEEEESTTC
T ss_pred             cCCCcEEEeCCCc
Confidence            2358899998874

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.75  E-value=5e-19  Score=148.26  Aligned_cols=198  Identities=15%  Similarity=0.137  Sum_probs=133.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc------CCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~------~~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++.      -++|
T Consensus        15 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   89 (260)
T 2ae2_A           15 TGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCL-----TQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN   89 (260)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCC
Confidence            799999999999999999999999999865432111     11111234688999999999988887743      2799


Q ss_pred             EEEEcCCCCc--------------------ccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      ++||+||...                    .++.++++++    .  +..++|++||...+...   |....|+.+|...
T Consensus        90 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~~sK~a~  166 (260)
T 2ae2_A           90 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV---PYEAVYGATKGAM  166 (260)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC---TTCHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC---CCcchHHHHHHHH
Confidence            9999998632                    1122344433    2  56799999997665322   2223699999998


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCC----CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNY----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      +.+.+       .+++++++++||.+.++...    ..-....+.......         ....+.+++|+|++++.++.
T Consensus       167 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dvA~~v~~l~s  237 (260)
T 2ae2_A          167 DQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC---------ALRRMGEPKELAAMVAFLCF  237 (260)
T ss_dssp             HHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTS---------TTCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcC
Confidence            88764       24799999999998876210    000000000111111         11347899999999999987


Q ss_pred             CCc--cCCceEEecCCcccc
Q 021331          198 NEK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~~~s  215 (314)
                      .+.  ..|+++++.+|..++
T Consensus       238 ~~~~~~tG~~~~vdgG~~~~  257 (260)
T 2ae2_A          238 PAASYVTGQIIYVDGGLMAN  257 (260)
T ss_dssp             GGGTTCCSCEEEESTTGGGC
T ss_pred             ccccCCCCCEEEECCCcccc
Confidence            532  368899999987544

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.75  E-value=1.6e-17  Score=139.91  Aligned_cols=192  Identities=16%  Similarity=0.126  Sum_probs=136.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......        .+...++.++.+|++|++++.++++..     ++|+
T Consensus        17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B           17 TGACGGIGLETSRVLARAGARVVLADLPETDLAGAA--------ASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHH--------HHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--------HHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999876532111        112357889999999999988888643     7999


Q ss_pred             EEEcCCCC-c---------------------ccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           76 VYDINGRE-A---------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~-~---------------------~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      +||+||.. .                     .++.++.+++    .  +..++|++||...+....   ....|+.+|..
T Consensus        89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---~~~~Y~asKaa  165 (271)
T 3tzq_B           89 VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYD---MSTAYACTKAA  165 (271)
T ss_dssp             EEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCS---SCHHHHHHHHH
T ss_pred             EEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCC---CChHHHHHHHH
Confidence            99999864 1                     0122333333    3  567999999977654322   22269999988


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.+.+       .+|+++.+++||.++++..................+.         ..+.+.+|+|++++.++....
T Consensus       166 ~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~r~~~p~dvA~~v~~L~s~~~  236 (271)
T 3tzq_B          166 IETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLA---------GRIGEPHEIAELVCFLASDRA  236 (271)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTT---------SSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCccc
Confidence            887764       2689999999999999864322222333333322221         236779999999999998643


Q ss_pred             --cCCceEEecCCc
Q 021331          201 --ASRQVFNISGEK  212 (314)
Q Consensus       201 --~~~~~~~i~~~~  212 (314)
                        ..|+++++.+|.
T Consensus       237 ~~itG~~i~vdGG~  250 (271)
T 3tzq_B          237 AFITGQVIAADSGL  250 (271)
T ss_dssp             TTCCSCEEEESTTT
T ss_pred             CCcCCCEEEECCCc
Confidence              368999999984

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.75  E-value=1.9e-18  Score=139.12  Aligned_cols=163  Identities=12%  Similarity=0.104  Sum_probs=121.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-CccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi~~   79 (314)
                      |||+|+||+++++.|+ +|++|++++|+..                      ++.+|++|+++++++++.. ++|+|||+
T Consensus         9 tGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~   65 (202)
T 3d7l_A            9 IGASGTLGSAVKERLE-KKAEVITAGRHSG----------------------DVTVDITNIDSIKKMYEQVGKVDAIVSA   65 (202)
T ss_dssp             ETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------------SEECCTTCHHHHHHHHHHHCCEEEEEEC
T ss_pred             EcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------------ceeeecCCHHHHHHHHHHhCCCCEEEEC
Confidence            7999999999999999 9999999998753                      2578999999999988743 48999999


Q ss_pred             CCCC--------------------cccHHHHHHhCC-C---CCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHh-
Q 021331           80 NGRE--------------------ADEVEPILDALP-N---LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLES-  134 (314)
Q Consensus        80 a~~~--------------------~~~~~~~~~~~~-~---~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~-  134 (314)
                      ||..                    ..++.++++++. .   ..+||++||...+...   +....|+.+|...|.+.+. 
T Consensus        66 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~---~~~~~Y~~sK~~~~~~~~~~  142 (202)
T 3d7l_A           66 TGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPI---VQGASAAMANGAVTAFAKSA  142 (202)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCC---TTCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCC---CccHHHHHHHHHHHHHHHHH
Confidence            9853                    223446666665 1   3689999997665322   2222689999999888753 


Q ss_pred             -----cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEec
Q 021331          135 -----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS  209 (314)
Q Consensus       135 -----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~  209 (314)
                           .+++++++||+.++++..          ...         .......+++++|+|++++.++.. ...|++|++.
T Consensus       143 ~~e~~~gi~v~~v~pg~v~~~~~----------~~~---------~~~~~~~~~~~~dva~~~~~~~~~-~~~G~~~~vd  202 (202)
T 3d7l_A          143 AIEMPRGIRINTVSPNVLEESWD----------KLE---------PFFEGFLPVPAAKVARAFEKSVFG-AQTGESYQVY  202 (202)
T ss_dssp             TTSCSTTCEEEEEEECCBGGGHH----------HHG---------GGSTTCCCBCHHHHHHHHHHHHHS-CCCSCEEEEC
T ss_pred             HHHccCCeEEEEEecCccCCchh----------hhh---------hhccccCCCCHHHHHHHHHHhhhc-cccCceEecC
Confidence                 379999999999998721          111         111235689999999999988854 3357788873

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.75  E-value=7.4e-18  Score=139.93  Aligned_cols=192  Identities=14%  Similarity=0.105  Sum_probs=132.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-CccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi~~   79 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......          ..++.++.+|++|+++++++++.. ++|++||+
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~   81 (246)
T 2ag5_A           12 TAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK----------YPGIQTRVLDVTKKKQIDQFANEVERLDVLFNV   81 (246)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG----------STTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh----------ccCceEEEeeCCCHHHHHHHHHHhCCCCEEEEC
Confidence            7999999999999999999999999998655321110          136889999999999998876644 69999999


Q ss_pred             CCCCcc--------------------cHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHH
Q 021331           80 NGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLE  133 (314)
Q Consensus        80 a~~~~~--------------------~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~  133 (314)
                      ||....                    ++.+++++    +.  +..++|++||...+....  +....|+.+|...+.+.+
T Consensus        82 Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--~~~~~Y~~sK~a~~~~~~  159 (246)
T 2ag5_A           82 AGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV--VNRCVYSTTKAAVIGLTK  159 (246)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC--TTBHHHHHHHHHHHHHHH
T ss_pred             CccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC--CCCccHHHHHHHHHHHHH
Confidence            986321                    12223333    32  567999999976653221  022269999998887764


Q ss_pred             h-------cCCceEEEecCeeeCCCCCCch-----hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          134 S-------KGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       134 ~-------~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      .       ++++++++||+.++++......     ............+         ...+.+.+|+|++++.++..+. 
T Consensus       160 ~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dvA~~v~~l~s~~~~  230 (246)
T 2ag5_A          160 SVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK---------TGRFATAEEIAMLCVYLASDESA  230 (246)
T ss_dssp             HHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT---------TSSCEEHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCcccc
Confidence            3       4899999999999987311000     0111111221111         1247889999999999997633 


Q ss_pred             -cCCceEEecCCcc
Q 021331          201 -ASRQVFNISGEKY  213 (314)
Q Consensus       201 -~~~~~~~i~~~~~  213 (314)
                       ..|+++++.++..
T Consensus       231 ~~tG~~i~vdgG~~  244 (246)
T 2ag5_A          231 YVTGNPVIIDGGWS  244 (246)
T ss_dssp             TCCSCEEEECTTGG
T ss_pred             CCCCCEEEECCCcc
Confidence             3688999998853

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.75  E-value=3.7e-18  Score=143.24  Aligned_cols=200  Identities=14%  Similarity=0.180  Sum_probs=135.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.......+.    ..+.....++.++.+|++|++++.+++++.     ++|+
T Consensus        13 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   88 (264)
T 3i4f_A           13 TAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMK----ETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDF   88 (264)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            8999999999999999999999999887654221111    111222357999999999999998888654     7999


Q ss_pred             EEEcCCCC----------------------cccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           76 VYDINGRE----------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~----------------------~~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      +||+||..                      ..++.++++++    .  +..++|++||.+.++... .+....|+.+|..
T Consensus        89 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~-~~~~~~Y~asKaa  167 (264)
T 3i4f_A           89 LINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPG-WIYRSAFAAAKVG  167 (264)
T ss_dssp             EECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCC-CTTCHHHHHHHHH
T ss_pred             EEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCC-CCCCchhHHHHHH
Confidence            99999931                      11233344443    3  567999999875543222 2222369999988


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.+.+       ..++++.+++||.++++.... ..........         .......+.+++|+|++++.++..+.
T Consensus       168 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~---------~~~p~~r~~~~~dva~~v~~l~s~~~  237 (264)
T 3i4f_A          168 LVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEA-TIQEARQLKE---------HNTPIGRSGTGEDIARTISFLCEDDS  237 (264)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSC-CHHHHHHC-----------------CCCCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEccCCccCccchh-ccHHHHHHHh---------hcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            877753       368999999999999884322 2222211111         11122347789999999999998643


Q ss_pred             --cCCceEEecCCcccc
Q 021331          201 --ASRQVFNISGEKYVT  215 (314)
Q Consensus       201 --~~~~~~~i~~~~~~s  215 (314)
                        ..|+++++.||....
T Consensus       238 ~~itG~~i~vdGG~~~~  254 (264)
T 3i4f_A          238 DMITGTIIEVTGAVDVI  254 (264)
T ss_dssp             TTCCSCEEEESCSCCCC
T ss_pred             CCCCCcEEEEcCceeec
Confidence              368999999986543

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.74  E-value=2.4e-18  Score=144.31  Aligned_cols=194  Identities=15%  Similarity=0.165  Sum_probs=131.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......        +...++.++.+|++|++++.++++..     ++|+
T Consensus        18 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~   89 (263)
T 3ak4_A           18 TGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVA--------GLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL   89 (263)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------TCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654321110        00136788999999999988887643     6999


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHh----CC--C-CCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      |||+||....                    ++.+++++    +.  + ..++|++||...+...   |....|+.+|...
T Consensus        90 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~~sK~a~  166 (263)
T 3ak4_A           90 LCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA---PLLAHYSASKFAV  166 (263)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC---TTCHHHHHHHHHH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC---CCchhHHHHHHHH
Confidence            9999986321                    12233333    22  3 5799999997665322   2223689999988


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCch-----h-----HHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHH
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----E-----EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  191 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  191 (314)
                      +.+.+       ..+++++++||+.++++......     .     ......+....         ....+++++|+|++
T Consensus       167 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~~~~~~~dvA~~  237 (263)
T 3ak4_A          167 FGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLT---------PLGRIEEPEDVADV  237 (263)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTC---------TTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcC---------CCCCCcCHHHHHHH
Confidence            77764       24899999999999887311000     0     01111111111         12358899999999


Q ss_pred             HHHHhcCCc--cCCceEEecCCccc
Q 021331          192 FVQVLGNEK--ASRQVFNISGEKYV  214 (314)
Q Consensus       192 ~~~~l~~~~--~~~~~~~i~~~~~~  214 (314)
                      ++.++..+.  ..|+++++.++..+
T Consensus       238 v~~l~s~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          238 VVFLASDAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHHHhCccccCCCCCEEEECcCEeC
Confidence            999997642  36889999998643

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.74  E-value=3.3e-18  Score=142.93  Aligned_cols=197  Identities=13%  Similarity=0.075  Sum_probs=131.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+. .....     .    ... .++.+|++|+++++++++..     ++|+
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~-----~----~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   80 (256)
T 2d1y_A           12 TGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAE-----A----IGG-AFFQVDLEDERERVRFVEEAAYALGRVDV   80 (256)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHH-----H----HTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHH-----H----hhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998754 21110     1    113 78899999999888877643     6899


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||....                    ++.+++++    +.  +..++|++||...+...   |....|+.+|...+
T Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---~~~~~Y~~sK~a~~  157 (256)
T 2d1y_A           81 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE---QENAAYNASKGGLV  157 (256)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC---TTBHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC---CCChhHHHHHHHHH
Confidence            9999986321                    12233333    32  46799999997654321   22236999999888


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHH-cCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK-AGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      .+.+       ..++++++++|+.+.++     +....+.... ................+++++|+|++++.+++.+. 
T Consensus       158 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~  232 (256)
T 2d1y_A          158 NLTRSLALDLAPLRIRVNAVAPGAIATE-----AVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKAS  232 (256)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCH-----HHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHhhcCeEEEEEeeCCccCc-----hhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            7764       35799999999998765     2211100000 01110000111223458899999999999997642 


Q ss_pred             -cCCceEEecCCccccH
Q 021331          201 -ASRQVFNISGEKYVTF  216 (314)
Q Consensus       201 -~~~~~~~i~~~~~~s~  216 (314)
                       ..|+++++.++..+++
T Consensus       233 ~~~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          233 FITGAILPVDGGMTASF  249 (256)
T ss_dssp             TCCSCEEEESTTGGGBC
T ss_pred             CCCCCEEEECCCccccc
Confidence             3688999999976654

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.74  E-value=1.4e-17  Score=138.54  Aligned_cols=192  Identities=15%  Similarity=0.138  Sum_probs=131.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-CccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi~~   79 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.....        ..+...++.++.+|+++++++.+++++. ++|++||+
T Consensus        20 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~   91 (249)
T 3f9i_A           20 TGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSL--------GNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCN   91 (249)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEEC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHH--------HHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            89999999999999999999999999986553211        1111357889999999999999998765 69999999


Q ss_pred             CCCCc--------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHH
Q 021331           80 NGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLE  133 (314)
Q Consensus        80 a~~~~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~  133 (314)
                      ||...                    .++.+++++    +.  +..+||++||...+....   ....|+.+|...+.+.+
T Consensus        92 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~~sK~a~~~~~~  168 (249)
T 3f9i_A           92 AGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNP---GQANYCASKAGLIGMTK  168 (249)
T ss_dssp             CC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCS---CSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCC---CCchhHHHHHHHHHHHH
Confidence            98632                    112233333    32  557999999977664322   22369999998777653


Q ss_pred             -------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cCCc
Q 021331          134 -------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQ  204 (314)
Q Consensus       134 -------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~~~  204 (314)
                             ..++++.+++||.+.++.... .............+         ...+.+++|+|++++.+++++.  ..|+
T Consensus       169 ~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~~~~~tG~  238 (249)
T 3f9i_A          169 SLSYEVATRGITVNAVAPGFIKSDMTDK-LNEKQREAIVQKIP---------LGTYGIPEDVAYAVAFLASNNASYITGQ  238 (249)
T ss_dssp             HHHHHHGGGTEEEEEEEECCBC-------CCHHHHHHHHHHCT---------TCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHcCcEEEEEecCccccCcccc-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCCccCCccCc
Confidence                   358999999999998874321 12222222222211         1357789999999999998643  2689


Q ss_pred             eEEecCCcc
Q 021331          205 VFNISGEKY  213 (314)
Q Consensus       205 ~~~i~~~~~  213 (314)
                      ++++.+|..
T Consensus       239 ~~~vdgG~~  247 (249)
T 3f9i_A          239 TLHVNGGML  247 (249)
T ss_dssp             EEEESTTSS
T ss_pred             EEEECCCEe
Confidence            999999864

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.74  E-value=1.2e-17  Score=139.58  Aligned_cols=194  Identities=12%  Similarity=0.142  Sum_probs=128.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+........        ...++.++.+|++|++++.++++..     ++|+
T Consensus        13 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A           13 TGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE--------LGAAVRFRNADVTNEADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH--------hCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999987664322211        1257889999999999888887643     7999


Q ss_pred             EEEcCCCCcc------------------------cHHHHHHh----CC--------CCCcEEEEeeceeeccCCCCCccC
Q 021331           76 VYDINGREAD------------------------EVEPILDA----LP--------NLEQFIYCSSAGVYLKSDLLPHCE  119 (314)
Q Consensus        76 vi~~a~~~~~------------------------~~~~~~~~----~~--------~~~~~i~~Ss~~v~~~~~~~~~~e  119 (314)
                      +||+||....                        ++..++++    +.        +..++|++||...+....   ...
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~  161 (257)
T 3tpc_A           85 LVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI---GQA  161 (257)
T ss_dssp             EEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT---TCH
T ss_pred             EEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC---CCc
Confidence            9999986411                        12222332    22        235799999977654322   222


Q ss_pred             ccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCce-eeeeeHHHHHHH
Q 021331          120 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQV-TQLGHVKDLARA  191 (314)
Q Consensus       120 ~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~D~a~~  191 (314)
                      .|+.+|...+.+.+       .+++++..++||.|.++.... ...........         .... ..+.+.+|+|++
T Consensus       162 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~---------~~p~~~r~~~~~dva~~  231 (257)
T 3tpc_A          162 AYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAG-MPQDVQDALAA---------SVPFPPRLGRAEEYAAL  231 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---------------C---------CSSSSCSCBCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhcc-CCHHHHHHHHh---------cCCCCCCCCCHHHHHHH
Confidence            69999988777653       368999999999999874211 11111111111         1111 347889999999


Q ss_pred             HHHHhcCCccCCceEEecCCcccc
Q 021331          192 FVQVLGNEKASRQVFNISGEKYVT  215 (314)
Q Consensus       192 ~~~~l~~~~~~~~~~~i~~~~~~s  215 (314)
                      ++.+++.....|+++++.||..++
T Consensus       232 v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          232 VKHICENTMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHHHHHCTTCCSCEEEESTTCCC-
T ss_pred             HHHHcccCCcCCcEEEECCCccCC
Confidence            999998765689999999987654

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.74  E-value=6.6e-18  Score=142.81  Aligned_cols=212  Identities=14%  Similarity=0.148  Sum_probs=139.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCC-------chhhhhccCceEEEEecCCChhhHHHhhhcC--
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES-------DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~--   71 (314)
                      |||+|+||.++++.|+++|++|++++|+............       ...+.....++.++.+|++|++++.++++..  
T Consensus        19 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   98 (278)
T 3sx2_A           19 TGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLD   98 (278)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            7999999999999999999999999987432110000000       0112223467899999999999998888643  


Q ss_pred             ---CccEEEEcCCCCc----------------ccHHHHHHh----CC---CCCcEEEEeeceeeccC-CCCCccCccccc
Q 021331           72 ---GFDVVYDINGREA----------------DEVEPILDA----LP---NLEQFIYCSSAGVYLKS-DLLPHCESRHKG  124 (314)
Q Consensus        72 ---~~d~vi~~a~~~~----------------~~~~~~~~~----~~---~~~~~i~~Ss~~v~~~~-~~~~~~e~~~~~  124 (314)
                         ++|++||+||...                .++.+++++    +.   ...++|++||...+... ...|....|+.+
T Consensus        99 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~Y~as  178 (278)
T 3sx2_A           99 ELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAA  178 (278)
T ss_dssp             HHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCSSHHHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccCCCCchHhHHH
Confidence               7999999999742                122333333    32   24689999997654322 111222269999


Q ss_pred             hhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHH-HHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          125 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR-LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       125 k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      |...+.+.+       ..++++..++||.|.++............. ..........+.... ..+.+++|+|++++.++
T Consensus       179 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~  257 (278)
T 3sx2_A          179 KHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVANAVAWLV  257 (278)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHh
Confidence            988877764       357999999999999985433222222221 222222222233333 57889999999999999


Q ss_pred             cCCc--cCCceEEecCCcc
Q 021331          197 GNEK--ASRQVFNISGEKY  213 (314)
Q Consensus       197 ~~~~--~~~~~~~i~~~~~  213 (314)
                      ....  ..|+++++.+|..
T Consensus       258 s~~~~~itG~~i~vdGG~~  276 (278)
T 3sx2_A          258 SDQARYITGVTLPVDAGFL  276 (278)
T ss_dssp             SGGGTTCCSCEEEESTTTT
T ss_pred             CcccccccCCEEeECCCcc
Confidence            7632  3689999998864

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.74  E-value=4.5e-18  Score=142.50  Aligned_cols=197  Identities=16%  Similarity=0.146  Sum_probs=131.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEc-CCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++| +.+......     ..+.....++.++.+|++|++++.++++..     ++|
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (261)
T 1gee_A           13 TGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVL-----EEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLD   87 (261)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999 443211100     111112356889999999999888877643     799


Q ss_pred             EEEEcCCCCcc--------------------cHHHH----HHhCC--C-CCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           75 VVYDINGREAD--------------------EVEPI----LDALP--N-LEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~~----~~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      +|||+||....                    ++.++    +..+.  + ..+||++||...+...   +....|+.+|..
T Consensus        88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~---~~~~~Y~~sK~a  164 (261)
T 1gee_A           88 VMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW---PLFVHYAASKGG  164 (261)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC---TTCHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCC---CCccHHHHHHHH
Confidence            99999986321                    12223    33332  3 5799999997654321   222268999977


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      .+.+.+       ..+++++++||+.++++...... .......+....  +       ...+++++|+|++++.++..+
T Consensus       165 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~dva~~~~~l~~~~  235 (261)
T 1gee_A          165 MKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMI--P-------MGYIGEPEEIAAVAAWLASSE  235 (261)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTC--T-------TSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcC--C-------CCCCcCHHHHHHHHHHHhCcc
Confidence            776653       24899999999999987321100 011112222111  1       124789999999999999753


Q ss_pred             --ccCCceEEecCCccc
Q 021331          200 --KASRQVFNISGEKYV  214 (314)
Q Consensus       200 --~~~~~~~~i~~~~~~  214 (314)
                        ...|+++++.++..+
T Consensus       236 ~~~~~G~~~~v~gg~~~  252 (261)
T 1gee_A          236 ASYVTGITLFADGGMTL  252 (261)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             ccCCCCcEEEEcCCccc
Confidence              236889999998643

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.74  E-value=3.8e-19  Score=149.54  Aligned_cols=207  Identities=15%  Similarity=0.156  Sum_probs=137.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+...  ..++.++.+|++|++++.++++..     ++
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (267)
T 2gdz_A           13 TGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCK-----AALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRL   87 (267)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence            799999999999999999999999999865421100     000000  246889999999999998887642     58


Q ss_pred             cEEEEcCCCCcc----------------cHHHHHHhCC--C---CCcEEEEeeceeeccCCCCCccCccccchhhHHHHH
Q 021331           74 DVVYDINGREAD----------------EVEPILDALP--N---LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVL  132 (314)
Q Consensus        74 d~vi~~a~~~~~----------------~~~~~~~~~~--~---~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~  132 (314)
                      |++||+||....                .++.++..+.  +   ..++|++||...+....   ....|..+|...+.+.
T Consensus        88 d~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~~sK~a~~~~~  164 (267)
T 2gdz_A           88 DILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA---QQPVYCASKHGIVGFT  164 (267)
T ss_dssp             CEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT---TCHHHHHHHHHHHHHH
T ss_pred             CEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCC---CCchHHHHHHHHHHHH
Confidence            999999986421                2345566554  2   57899999987764322   2225889998877665


Q ss_pred             H---------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCe-ecCCCCCceeeeeeHHHHHHHHHHHhcCCccC
Q 021331          133 E---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-PIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  202 (314)
Q Consensus       133 ~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~  202 (314)
                      +         ..++++++++||.+.++.... ....  ......... ...........+++++|+|++++.+++++...
T Consensus       165 ~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~  241 (267)
T 2gdz_A          165 RSAALAANLMNSGVRLNAICPGFVNTAILES-IEKE--ENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDALN  241 (267)
T ss_dssp             HHHHHHHHHHTCCEEEEEEEESCBSSHHHHG-GGCH--HHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCTTCS
T ss_pred             HHHHHHHHhccCCcEEEEEecCcCcchhhhc-cccc--cccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHhcCcCCC
Confidence            4         358999999999987762100 0000  000000000 00000001134789999999999999876667


Q ss_pred             CceEEecCCccccHHH
Q 021331          203 RQVFNISGEKYVTFDG  218 (314)
Q Consensus       203 ~~~~~i~~~~~~s~~e  218 (314)
                      |+++++.+++.+++.|
T Consensus       242 G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          242 GAIMKITTSKGIHFQD  257 (267)
T ss_dssp             SCEEEEETTTEEEECC
T ss_pred             CcEEEecCCCcccccC
Confidence            8999999988777554

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.74  E-value=1.5e-18  Score=145.34  Aligned_cols=198  Identities=13%  Similarity=0.160  Sum_probs=134.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        20 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   94 (260)
T 2zat_A           20 TASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTV-----ATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDI   94 (260)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111     111222346888999999999888877643     7999


Q ss_pred             EEEcCCCCc---------------------ccH----HHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA---------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~---------------------~~~----~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||...                     .++    +.++..+.  +..++|++||...+...   +....|+.+|...
T Consensus        95 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~~sK~a~  171 (260)
T 2zat_A           95 LVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPF---PNLGPYNVSKTAL  171 (260)
T ss_dssp             EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC---TTBHHHHHHHHHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCC---CCchhHHHHHHHH
Confidence            999998631                     112    22333332  56799999998776432   2222689999988


Q ss_pred             HHHHHh-------cCCceEEEecCeeeCCCCCCchh-HHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          129 ESVLES-------KGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       129 e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      +.+.+.       .++++++++|+.+.++....... ..........    .     ....+.+++|+|++++.++..+.
T Consensus       172 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~dva~~v~~l~s~~~  242 (260)
T 2zat_A          172 LGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKES----L-----RIRRLGNPEDCAGIVSFLCSEDA  242 (260)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHH----H-----TCSSCBCGGGGHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhc----C-----CCCCCCCHHHHHHHHHHHcCccc
Confidence            877642       48999999999998873211000 0000111110    0     11347889999999999987643


Q ss_pred             --cCCceEEecCCcccc
Q 021331          201 --ASRQVFNISGEKYVT  215 (314)
Q Consensus       201 --~~~~~~~i~~~~~~s  215 (314)
                        ..|+++++.+|...|
T Consensus       243 ~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          243 SYITGETVVVGGGTASR  259 (260)
T ss_dssp             TTCCSCEEEESTTCCCC
T ss_pred             CCccCCEEEECCCcccc
Confidence              268899999998765

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.74  E-value=9.5e-18  Score=142.61  Aligned_cols=196  Identities=17%  Similarity=0.208  Sum_probs=136.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhcc-CceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.... .++.++.+|++|+++++++++..     ++|
T Consensus        47 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  121 (293)
T 3rih_A           47 TGGTKGIGRGIATVFARAGANVAVAARSPRELSSVT-----AELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALD  121 (293)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-----HHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence            899999999999999999999999999876532111     1111112 47899999999999888877643     689


Q ss_pred             EEEEcCCCCc--------------------ccHHHHHHhC----C--CCCcEEEEeeceee-ccCCCCCccCccccchhh
Q 021331           75 VVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVY-LKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~~~~~~----~--~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~k~~  127 (314)
                      ++||+||...                    .++.++++++    .  +..++|++||...+ ..   .+....|+.+|..
T Consensus       122 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~---~~~~~~Y~asKaa  198 (293)
T 3rih_A          122 VVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTG---YPGWSHYGASKAA  198 (293)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBB---CTTCHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCC---CCCCHHHHHHHHH
Confidence            9999998632                    2234455554    2  56799999996642 11   1222269999998


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.+.+       .+|+++..++||.|+++.... .............++         ..+...+|+|++++.++....
T Consensus       199 ~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~p~dvA~~v~fL~s~~a  268 (293)
T 3rih_A          199 QLGFMRTAAIELAPRGVTVNAILPGNILTEGLVD-MGEEYISGMARSIPM---------GMLGSPVDIGHLAAFLATDEA  268 (293)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH-TCHHHHHHHHTTSTT---------SSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhh-ccHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhCccc
Confidence            877764       368999999999999873211 112223333332221         235578999999999997532


Q ss_pred             --cCCceEEecCCccc
Q 021331          201 --ASRQVFNISGEKYV  214 (314)
Q Consensus       201 --~~~~~~~i~~~~~~  214 (314)
                        ..|+++++.||..+
T Consensus       269 ~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          269 GYITGQAIVVDGGQVL  284 (293)
T ss_dssp             TTCCSCEEEESTTTTC
T ss_pred             cCCCCCEEEECCCccC
Confidence              36899999998754

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.74  E-value=2.7e-17  Score=136.84  Aligned_cols=194  Identities=13%  Similarity=0.056  Sum_probs=123.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+...               .++.++.+|++|++++.++++..     ++|+
T Consensus        13 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~   77 (250)
T 2fwm_X           13 TGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQ---------------YPFATEVMDVADAAQVAQVCQRLLAETERLDA   77 (250)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSC---------------CSSEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhc---------------CCceEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865310               23788899999999988887643     6999


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||...                    .++.++++++    .  +..++|++||...+...   +....|+.+|...+
T Consensus        78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---~~~~~Y~~sK~a~~  154 (250)
T 2fwm_X           78 LVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPR---IGMSAYGASKAALK  154 (250)
T ss_dssp             EEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC---TTCHHHHHHHHHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC---CCCchHHHHHHHHH
Confidence            999998632                    1122333333    3  56799999997765322   22236899999888


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhH-HHHH-HHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFH-RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.+       .+++++++++|+.++++........ .... .+.....  ..........+.+.+|+|++++.++..+.
T Consensus       155 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~p~dvA~~v~~l~s~~~  232 (250)
T 2fwm_X          155 SLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGE--QFKLGIPLGKIARPQEIANTILFLASDLA  232 (250)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhh--cccccCCCCCCcCHHHHHHHHHHHhCccc
Confidence            7764       2589999999999998742211000 0000 0000000  00001112347889999999999997642


Q ss_pred             --cCCceEEecCCccc
Q 021331          201 --ASRQVFNISGEKYV  214 (314)
Q Consensus       201 --~~~~~~~i~~~~~~  214 (314)
                        ..|+.+.+.++..+
T Consensus       233 ~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          233 SHITLQDIVVDGGSTL  248 (250)
T ss_dssp             TTCCSCEEEESTTTTT
T ss_pred             cCCCCCEEEECCCccc
Confidence              36889999988643

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.74  E-value=3e-18  Score=143.23  Aligned_cols=198  Identities=15%  Similarity=0.189  Sum_probs=135.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        12 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   86 (257)
T 3imf_A           12 TGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAK-----LEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDI   86 (257)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999876532111     111222357899999999999988887643     7899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHh----C-C--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA--------------------DEVEPILDA----L-P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~----~-~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||...                    .++.++.++    + .  +..++|++||...+...   +....|..+|...
T Consensus        87 lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asKaa~  163 (257)
T 3imf_A           87 LINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAG---PGVIHSAAAKAGV  163 (257)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCC---TTCHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCC---CCcHHHHHHHHHH
Confidence            999999531                    112233333    3 2  35789999997665332   2222688889877


Q ss_pred             HHHHH--------hcCCceEEEecCeeeCCCCCCch--hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          129 ESVLE--------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       129 e~~~~--------~~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      +.+.+        .+|+++..++||.+.++......  ...+.......         .....+.+++|+|++++.++..
T Consensus       164 ~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~  234 (257)
T 3imf_A          164 LAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQS---------VPLGRLGTPEEIAGLAYYLCSD  234 (257)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTT---------STTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCc
Confidence            66642        35899999999999988532211  00011111111         1123477899999999999986


Q ss_pred             Cc--cCCceEEecCCcccc
Q 021331          199 EK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       199 ~~--~~~~~~~i~~~~~~s  215 (314)
                      +.  ..|+++++.+|..++
T Consensus       235 ~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          235 EAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             GGTTCCSCEEEESTTTTSC
T ss_pred             hhcCccCCEEEECCCcccC
Confidence            43  378999999997654

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.74  E-value=6.8e-18  Score=141.17  Aligned_cols=190  Identities=13%  Similarity=0.073  Sum_probs=129.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.....+        .  ..++.++.+|++|++++.++++..     ++|+
T Consensus        33 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (260)
T 3gem_A           33 TGASQRVGLHCALRLLEHGHRVIISYRTEHASVTEL--------R--QAGAVALYGDFSCETGIMAFIDLLKTQTSSLRA  102 (260)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHH--------H--HHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH--------H--hcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            899999999999999999999999999876532111        1  135889999999999888887643     6999


Q ss_pred             EEEcCCCCc-------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           76 VYDINGREA-------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        76 vi~~a~~~~-------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      +||+||...                   .++.++.++    +.  +..++|++||...+....   ....|+.+|...+.
T Consensus       103 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~---~~~~Y~asKaa~~~  179 (260)
T 3gem_A          103 VVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSS---KHIAYCATKAGLES  179 (260)
T ss_dssp             EEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCS---SCHHHHHHHHHHHH
T ss_pred             EEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC---CcHhHHHHHHHHHH
Confidence            999999632                   112233333    22  457899999977654322   22269999988877


Q ss_pred             HHH----h--cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCc
Q 021331          131 VLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  204 (314)
Q Consensus       131 ~~~----~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~  204 (314)
                      +.+    +  .++++..++||.+.++....   ...........+         ...+.+++|+|++++.+++.....|+
T Consensus       180 l~~~la~e~~~~Irvn~v~PG~v~t~~~~~---~~~~~~~~~~~p---------~~r~~~~edva~~v~~L~~~~~itG~  247 (260)
T 3gem_A          180 LTLSFAARFAPLVKVNGIAPALLMFQPKDD---AAYRANALAKSA---------LGIEPGAEVIYQSLRYLLDSTYVTGT  247 (260)
T ss_dssp             HHHHHHHHHTTTCEEEEEEECTTCC------------------CC---------SCCCCCTHHHHHHHHHHHHCSSCCSC
T ss_pred             HHHHHHHHHCCCCEEEEEeecccccCCCCC---HHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhhCCCCCCC
Confidence            764    2  25899999999988763211   111111111111         12355689999999999976666899


Q ss_pred             eEEecCCcccc
Q 021331          205 VFNISGEKYVT  215 (314)
Q Consensus       205 ~~~i~~~~~~s  215 (314)
                      ++++.+|..++
T Consensus       248 ~i~vdGG~~~~  258 (260)
T 3gem_A          248 TLTVNGGRHVK  258 (260)
T ss_dssp             EEEESTTTTTC
T ss_pred             EEEECCCcccC
Confidence            99999997665

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.74  E-value=2.7e-18  Score=142.36  Aligned_cols=194  Identities=17%  Similarity=0.174  Sum_probs=130.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEE-EcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.+++++|+++|++|+++ +|+........     ..+.....++.++.+|++|+++++++++..     ++|
T Consensus         7 TGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   81 (244)
T 1edo_A            7 TGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVS-----KQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            8999999999999999999999995 66654321100     112222356889999999999998888642     699


Q ss_pred             EEEEcCCCCc--------------------ccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +|||+||...                    .++.++++++    .  +..+||++||...+...   +....|..+|...
T Consensus        82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---~~~~~Y~~sK~a~  158 (244)
T 1edo_A           82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN---IGQANYAAAKAGV  158 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---TTCHHHHHHHHHH
T ss_pred             EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC---CCCccchhhHHHH
Confidence            9999998632                    1122333332    2  56799999997554322   1223688899877


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      +.+.+       ..+++++++||+.++++.... .............+         ...+++++|+|++++.++..+. 
T Consensus       159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~  228 (244)
T 1edo_A          159 IGFSKTAAREGASRNINVNVVCPGFIASDMTAK-LGEDMEKKILGTIP---------LGRTGQPENVAGLVEFLALSPAA  228 (244)
T ss_dssp             HHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-TCHHHHHHHHTSCT---------TCSCBCHHHHHHHHHHHHHCSGG
T ss_pred             HHHHHHHHHHhhhcCCEEEEEeeCccccchhhh-cChHHHHHHhhcCC---------CCCCCCHHHHHHHHHHHhCCCcc
Confidence            76653       258999999999998863211 11122222222111         1247899999999999984432 


Q ss_pred             --cCCceEEecCCc
Q 021331          201 --ASRQVFNISGEK  212 (314)
Q Consensus       201 --~~~~~~~i~~~~  212 (314)
                        ..|++|++.++.
T Consensus       229 ~~~~G~~~~v~gG~  242 (244)
T 1edo_A          229 SYITGQAFTIDGGI  242 (244)
T ss_dssp             GGCCSCEEEESTTT
T ss_pred             CCcCCCEEEeCCCc
Confidence              258899999875

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.74  E-value=1.4e-17  Score=138.84  Aligned_cols=193  Identities=15%  Similarity=0.146  Sum_probs=132.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......        .+...++.++.+|++|+++++++++..     ++|+
T Consensus        12 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (253)
T 1hxh_A           12 TGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLA--------AELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH--------HHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422110        011246889999999999888887642     5799


Q ss_pred             EEEcCCCCcc------------------------cHHHHHHhCC-CCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           76 VYDINGREAD------------------------EVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        76 vi~~a~~~~~------------------------~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      +||+||....                        .++.++..+. ...++|++||...+...   +....|..+|...+.
T Consensus        84 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~~sK~a~~~  160 (253)
T 1hxh_A           84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPI---EQYAGYSASKAAVSA  160 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCC---TTBHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCC---CCCccHHHHHHHHHH
Confidence            9999986321                        1334555554 22899999998766432   222268999998887


Q ss_pred             HHHh-------c--CCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCe-e-cCC--CCCceeeeeeHHHHHHHHHHHhc
Q 021331          131 VLES-------K--GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-P-IPG--SGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       131 ~~~~-------~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~-~-~~~--~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      +.+.       +  +++++++||+.++++.     ....    ...... . +..  .......+.+++|+|++++.++.
T Consensus       161 ~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~-----~~~~----~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s  231 (253)
T 1hxh_A          161 LTRAAALSCRKQGYAIRVNSIHPDGIYTPM-----MQAS----LPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLAS  231 (253)
T ss_dssp             HHHHHHHHHHHHTCCEEEEEEEESEECCHH-----HHHH----SCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHS
T ss_pred             HHHHHHHHhhhcCCCeEEEEEEeCCccCch-----hhhc----cchhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcC
Confidence            7643       3  8999999999999872     1110    000000 0 000  01112357899999999999998


Q ss_pred             CCc--cCCceEEecCCcc
Q 021331          198 NEK--ASRQVFNISGEKY  213 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~~  213 (314)
                      .+.  ..|+.+++.++..
T Consensus       232 ~~~~~~tG~~~~vdgG~~  249 (253)
T 1hxh_A          232 DESSVMSGSELHADNSIL  249 (253)
T ss_dssp             GGGTTCCSCEEEESSSCT
T ss_pred             ccccCCCCcEEEECCCcc
Confidence            643  3688999998853

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.74  E-value=1.1e-17  Score=140.23  Aligned_cols=197  Identities=18%  Similarity=0.213  Sum_probs=135.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhcc-CceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.... .++.++.+|++|+++++++++..     ++|
T Consensus        16 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   90 (262)
T 3pk0_A           16 TGGTKGIGRGIATVFARAGANVAVAGRSTADIDACV-----ADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGID   90 (262)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            899999999999999999999999999876532111     0111112 57899999999999888877643     799


Q ss_pred             EEEEcCCCCc--------------------ccHHH----HHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREA--------------------DEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~----~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      ++||+||...                    .++.+    ++..+.  +..++|++||.....  ...|....|+.+|...
T Consensus        91 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~~~~~Y~asK~a~  168 (262)
T 3pk0_A           91 VVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI--TGYPGWSHYGATKAAQ  168 (262)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT--BCCTTCHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc--CCCCCChhhHHHHHHH
Confidence            9999999632                    11222    333333  567999999965421  1112223699999988


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      +.+.+       .+|+++..++||.++++.... .............+.         ..+.+.+|+|++++.++.... 
T Consensus       169 ~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~p~dva~~v~~L~s~~~~  238 (262)
T 3pk0_A          169 LGFMRTAAIELAPHKITVNAIMPGNIMTEGLLE-NGEEYIASMARSIPA---------GALGTPEDIGHLAAFLATKEAG  238 (262)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHT-TCHHHHHHHHTTSTT---------SSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHhhCcEEEEEEeCcCcCccccc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCcccc
Confidence            87764       268999999999998873211 112222333322211         236789999999999997643 


Q ss_pred             -cCCceEEecCCccc
Q 021331          201 -ASRQVFNISGEKYV  214 (314)
Q Consensus       201 -~~~~~~~i~~~~~~  214 (314)
                       ..|+++++.||..+
T Consensus       239 ~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          239 YITGQAIAVDGGQVL  253 (262)
T ss_dssp             TCCSCEEEESTTTTC
T ss_pred             CCcCCEEEECCCeec
Confidence             37899999998754

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.74  E-value=5.8e-18  Score=143.27  Aligned_cols=206  Identities=18%  Similarity=0.223  Sum_probs=132.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+.......+.    ..+... ..++.++.+|++|++++.++++..     ++|
T Consensus        31 TGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  106 (281)
T 3v2h_A           31 TGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVT----DEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGAD  106 (281)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHH----HHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSCS
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH----HHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCC
Confidence            7999999999999999999999999985432111100    011111 357889999999999988887643     799


Q ss_pred             EEEEcCCCCc--------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      ++||+||...                    .++.+++++    +.  +..++|++||...+...   +....|+.+|...
T Consensus       107 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asKaa~  183 (281)
T 3v2h_A          107 ILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVAS---PFKSAYVAAKHGI  183 (281)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---TTCHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCC---CCchHHHHHHHHH
Confidence            9999999732                    122333443    33  55789999997665322   2223699999888


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHH-HHHHcCCC-eecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFF-HRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      +.+.+       ..|+++..++||.|.++........... ........ ............+.+++|+|++++.++...
T Consensus       184 ~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~  263 (281)
T 3v2h_A          184 MGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAGDD  263 (281)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHHHHHHSSG
T ss_pred             HHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCC
Confidence            77753       3589999999999998742211100000 00000000 011123344567899999999999999864


Q ss_pred             c--cCCceEEecCCcc
Q 021331          200 K--ASRQVFNISGEKY  213 (314)
Q Consensus       200 ~--~~~~~~~i~~~~~  213 (314)
                      .  ..|+++++.||..
T Consensus       264 a~~itG~~i~vdGG~~  279 (281)
T 3v2h_A          264 AAQITGTHVSMDGGWT  279 (281)
T ss_dssp             GGGCCSCEEEESTTGG
T ss_pred             cCCCCCcEEEECCCcc
Confidence            3  3689999999853

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.74  E-value=2.8e-18  Score=142.36  Aligned_cols=194  Identities=13%  Similarity=0.207  Sum_probs=130.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEE-EcCCcccccCCCCCCchhhhhccCceEE-EEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILH-LKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+||.++++.|+++|++|+++ +|+.+......     ..+.....++.+ +.+|++|++++++++++.     ++
T Consensus         7 TGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (245)
T 2ph3_A            7 TGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVA-----EEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGL   81 (245)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHH-----HHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence            8999999999999999999999998 67654321100     011111245666 899999999888876532     79


Q ss_pred             cEEEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           74 DVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        74 d~vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      |+|||+||....                    +    ++.++..+.  +.++||++||...+...   +....|..+|..
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---~~~~~Y~~sK~a  158 (245)
T 2ph3_A           82 DTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGN---PGQANYVASKAG  158 (245)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---SSBHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCC---CCCcchHHHHHH
Confidence            999999986321                    1    344455554  66899999997544321   122268899987


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.+.+       ..+++++++||+.++++.... .............+         ...+++++|+|++++.++..+.
T Consensus       159 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~  228 (245)
T 2ph3_A          159 LIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER-LPQEVKEAYLKQIP---------AGRFGRPEEVAEAVAFLVSEKA  228 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHHTCT---------TCSCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCccc
Confidence            777653       248999999999998873211 11122222222211         1347899999999999997642


Q ss_pred             --cCCceEEecCCc
Q 021331          201 --ASRQVFNISGEK  212 (314)
Q Consensus       201 --~~~~~~~i~~~~  212 (314)
                        ..|++|++.++.
T Consensus       229 ~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          229 GYITGQTLCVDGGL  242 (245)
T ss_dssp             TTCCSCEEEESTTC
T ss_pred             ccccCCEEEECCCC
Confidence              258899998875

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.74  E-value=1.1e-18  Score=140.97  Aligned_cols=165  Identities=19%  Similarity=0.121  Sum_probs=121.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-CCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-KGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-~~~d~vi~~   79 (314)
                      |||+|++|.+++++|+++  +|++++|+.+......         +.... .++.+|++|++++.++++. -++|+|||+
T Consensus         6 tGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~---------~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~   73 (207)
T 2yut_A            6 TGATGGLGGAFARALKGH--DLLLSGRRAGALAELA---------REVGA-RALPADLADELEAKALLEEAGPLDLLVHA   73 (207)
T ss_dssp             ETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHH---------HHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEEC
T ss_pred             EcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHH---------HhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEEC
Confidence            799999999999999998  9999999765422110         00112 7888999999999988863 269999999


Q ss_pred             CCCCc--------------------ccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHh---
Q 021331           80 NGREA--------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLES---  134 (314)
Q Consensus        80 a~~~~--------------------~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~---  134 (314)
                      ||...                    .++.++++++.  +.++||++||...+....   ....|+.+|...+.+++.   
T Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~---~~~~Y~~sK~a~~~~~~~~~~  150 (207)
T 2yut_A           74 VGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVP---GFAAYAAAKGALEAYLEAARK  150 (207)
T ss_dssp             CCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSST---TBHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCC---CcchHHHHHHHHHHHHHHHHH
Confidence            98632                    22456777776  567999999988775432   122689999988887643   


Q ss_pred             ----cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          135 ----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       135 ----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                          ++++++++||+.++++..             .       +.+.....+++++|+|++++.+++++.
T Consensus       151 ~~~~~gi~v~~v~pg~v~t~~~-------------~-------~~~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          151 ELLREGVHLVLVRLPAVATGLW-------------A-------PLGGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHTTTCEEEEECCCCBCSGGG-------------G-------GGTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHhhhCCEEEEEecCcccCCCc-------------c-------ccCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence                589999999999998730             0       111223578999999999999998765

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.73  E-value=8.3e-18  Score=141.79  Aligned_cols=197  Identities=13%  Similarity=0.115  Sum_probs=131.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc------CCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~------~~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++.      -++|
T Consensus        27 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id  101 (273)
T 1ae1_A           27 TGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECL-----EIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN  101 (273)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred             ECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            799999999999999999999999999865422111     11122235688999999999988887743      2799


Q ss_pred             EEEEcCCCCc--------------------ccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      ++||+||...                    .++.++++++    .  +..++|++||...+....   ....|..+|...
T Consensus       102 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~---~~~~Y~asK~a~  178 (273)
T 1ae1_A          102 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP---SVSLYSASKGAI  178 (273)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT---TCHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCC---CcchhHHHHHHH
Confidence            9999998632                    1122333332    2  567999999987764322   223689999888


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCch-----hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      +.+.+       ..++++++++||.++++......     .......+....+         ...+.+++|+|++++.++
T Consensus       179 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~dvA~~v~~l~  249 (273)
T 1ae1_A          179 NQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP---------MGRAGKPQEVSALIAFLC  249 (273)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHST---------TCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHh
Confidence            87764       34899999999999988422110     0111122211111         123778999999999998


Q ss_pred             cCCc--cCCceEEecCCccc
Q 021331          197 GNEK--ASRQVFNISGEKYV  214 (314)
Q Consensus       197 ~~~~--~~~~~~~i~~~~~~  214 (314)
                      ....  ..|+++++.+|..+
T Consensus       250 s~~~~~~tG~~i~vdGG~~~  269 (273)
T 1ae1_A          250 FPAASYITGQIIWADGGFTA  269 (273)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CccccCcCCCEEEECCCccc
Confidence            7532  36889999998643

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.73  E-value=1.3e-17  Score=139.55  Aligned_cols=188  Identities=16%  Similarity=0.187  Sum_probs=133.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......        .+....+.++.+|++|++++.++++..     ++|+
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   84 (260)
T 1nff_A           13 SGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMA--------AELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   84 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865432110        011135788999999999988887643     7999


Q ss_pred             EEEcCCCCcc--------------------cH----HHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||....                    ++    +.++..+.  +..++|++||...+...   +....|+.+|...+
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~~sK~a~~  161 (260)
T 1nff_A           85 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT---VACHGYTATKFAVR  161 (260)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---TTBHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCC---CCchhHHHHHHHHH
Confidence            9999986321                    11    34444444  56799999998765432   22236899999888


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       .++++++++||+.++++...  .         ....+.    ......+.+++|+|++++.++..+.  
T Consensus       162 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~---------~~~~~~----~~~~~~~~~~~dvA~~v~~l~s~~~~~  226 (260)
T 1nff_A          162 GLTKSTALELGPSGIRVNSIHPGLVKTPMTD--W---------VPEDIF----QTALGRAAEPVEVSNLVVYLASDESSY  226 (260)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--T---------SCTTCS----CCSSSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHhCccCcEEEEEEeCCCCCCccc--c---------chhhHH----hCccCCCCCHHHHHHHHHHHhCccccC
Confidence            7764       26899999999999987421  0         001110    1112357889999999999997632  


Q ss_pred             cCCceEEecCCccc
Q 021331          201 ASRQVFNISGEKYV  214 (314)
Q Consensus       201 ~~~~~~~i~~~~~~  214 (314)
                      ..|++|++.++..+
T Consensus       227 ~~G~~~~v~gG~~~  240 (260)
T 1nff_A          227 STGAEFVVDGGTVA  240 (260)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CcCCEEEECCCeec
Confidence            25889999998643

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.73  E-value=4e-18  Score=143.00  Aligned_cols=197  Identities=17%  Similarity=0.192  Sum_probs=135.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.+++++.     ++|+
T Consensus        17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   91 (264)
T 3ucx_A           17 SGVGPALGTTLARRCAEQGADLVLAARTVERLEDVA-----KQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDV   91 (264)
T ss_dssp             ESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSE
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            799999999999999999999999999865432111     122222467899999999999988887643     6899


Q ss_pred             EEEcCCCC-c--------------------ccHHHHHHhCC-----CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGRE-A--------------------DEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~-~--------------------~~~~~~~~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||.. .                    .++.++++++.     ...++|++||...+....   ....|+.+|...+
T Consensus        92 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~asKaa~~  168 (264)
T 3ucx_A           92 VINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQA---KYGAYKMAKSALL  168 (264)
T ss_dssp             EEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCT---TCHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCC---ccHHHHHHHHHHH
Confidence            99999763 1                    11233444432     236999999977653322   2226899998887


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCch----------hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHH
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  192 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  192 (314)
                      .+.+       .+++++..++||.|+++.....+          ...+......         ......+.+++|+|+++
T Consensus       169 ~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~p~dvA~~v  239 (264)
T 3ucx_A          169 AMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAA---------GSDLKRLPTEDEVASAI  239 (264)
T ss_dssp             HHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHT---------TSSSSSCCBHHHHHHHH
T ss_pred             HHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhc---------cCCcccCCCHHHHHHHH
Confidence            7753       36899999999999887211000          0111111111         12224577899999999


Q ss_pred             HHHhcCCc--cCCceEEecCCccc
Q 021331          193 VQVLGNEK--ASRQVFNISGEKYV  214 (314)
Q Consensus       193 ~~~l~~~~--~~~~~~~i~~~~~~  214 (314)
                      +.+++...  ..|+++++.+|..+
T Consensus       240 ~~L~s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          240 LFMASDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHcCccccCCCCCEEEECCCccC
Confidence            99997633  36899999998743

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.73  E-value=1.4e-17  Score=139.08  Aligned_cols=198  Identities=14%  Similarity=0.140  Sum_probs=135.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEE-EcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|+++ +|+........     ..+.....++.++.+|++|+++++++++..     ++|
T Consensus        10 TGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (258)
T 3oid_A           10 TGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETA-----EEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLD   84 (258)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            8999999999999999999999987 66654321111     112222357899999999999998888643     689


Q ss_pred             EEEEcCCCCc--------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      ++||+||...                    .++.++.++    +.  +..++|++||...+....   ....|+.+|...
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~---~~~~Y~asKaa~  161 (258)
T 3oid_A           85 VFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLE---NYTTVGVSKAAL  161 (258)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCT---TCHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCC---CcHHHHHHHHHH
Confidence            9999998632                    112233333    33  456999999977653322   222699999988


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCc-hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      +.+.+       ..++++..++||.+.++..... .............+         ...+.+++|+|++++.+++...
T Consensus       162 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~~~dva~~v~~L~s~~~  232 (258)
T 3oid_A          162 EALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTP---------AGRMVEIKDMVDTVEFLVSSKA  232 (258)
T ss_dssp             HHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCT---------TSSCBCHHHHHHHHHHHTSSTT
T ss_pred             HHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCccc
Confidence            87764       3479999999999988742111 11122222222221         1247789999999999998643


Q ss_pred             --cCCceEEecCCcccc
Q 021331          201 --ASRQVFNISGEKYVT  215 (314)
Q Consensus       201 --~~~~~~~i~~~~~~s  215 (314)
                        ..|+++++.+|..+.
T Consensus       233 ~~itG~~i~vdGG~~~~  249 (258)
T 3oid_A          233 DMIRGQTIIVDGGRSLL  249 (258)
T ss_dssp             TTCCSCEEEESTTGGGB
T ss_pred             CCccCCEEEECCCccCC
Confidence              368999999987543

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.73  E-value=1.2e-17  Score=140.52  Aligned_cols=195  Identities=18%  Similarity=0.193  Sum_probs=134.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.......+.    ..+.....++.++.+|++|+++++++++..     ++|+
T Consensus        34 TGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~  109 (269)
T 4dmm_A           34 TGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVV----AAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDV  109 (269)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            8999999999999999999999999985433211110    122222457889999999999988887643     7999


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||...                    .++.+++++    +.  +..++|++||...+....   ....|+.+|...+
T Consensus       110 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~asK~a~~  186 (269)
T 4dmm_A          110 LVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNP---GQANYSAAKAGVI  186 (269)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCT---TCHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC---CchhHHHHHHHHH
Confidence            999998742                    112233333    32  567999999976553322   2226899998777


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       ..|+++..++||.|.++.... ..   ........+         ...+.+.+|+|++++.++.++.  
T Consensus       187 ~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~---~~~~~~~~p---------~~r~~~~~dvA~~v~~l~s~~~~~  253 (269)
T 4dmm_A          187 GLTKTVAKELASRGITVNAVAPGFIATDMTSE-LA---AEKLLEVIP---------LGRYGEAAEVAGVVRFLAADPAAA  253 (269)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECCBTTSCSCH-HH---HHHHGGGCT---------TSSCBCHHHHHHHHHHHHHCGGGG
T ss_pred             HHHHHHHHHHhhhCcEEEEEEECCCcCccccc-cc---HHHHHhcCC---------CCCCCCHHHHHHHHHHHhCCcccC
Confidence            6653       358999999999998874321 11   122222111         1246789999999999998742  


Q ss_pred             -cCCceEEecCCcccc
Q 021331          201 -ASRQVFNISGEKYVT  215 (314)
Q Consensus       201 -~~~~~~~i~~~~~~s  215 (314)
                       ..|+++++.+|..++
T Consensus       254 ~itG~~i~vdGG~~~s  269 (269)
T 4dmm_A          254 YITGQVINIDGGLVMA  269 (269)
T ss_dssp             GCCSCEEEESTTSCCC
T ss_pred             CCcCCEEEECCCeecC
Confidence             368999999987553

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.73  E-value=7.3e-18  Score=143.04  Aligned_cols=194  Identities=16%  Similarity=0.222  Sum_probs=130.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|+++++++++..     ++|+
T Consensus        50 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~  124 (285)
T 2c07_A           50 TGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVV-----DEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDI  124 (285)
T ss_dssp             ESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-----HHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999888765422110     111112356889999999999998887532     6999


Q ss_pred             EEEcCCCCc--------------------cc----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |||+||...                    .+    ++.++..+.  +..+||++||...+....   ....|+.+|...+
T Consensus       125 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---~~~~Y~asK~a~~  201 (285)
T 2c07_A          125 LVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV---GQANYSSSKAGVI  201 (285)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT---TCHHHHHHHHHHH
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCC---CCchHHHHHHHHH
Confidence            999998632                    12    223333333  567999999976543321   1226899999877


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       ..++++++++|+.+.++.... .............+  .       ..+++++|+|++++.++..+.  
T Consensus       202 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~--~-------~~~~~~~dvA~~~~~l~~~~~~~  271 (285)
T 2c07_A          202 GFTKSLAKELASRNITVNAIAPGFISSDMTDK-ISEQIKKNIISNIP--A-------GRMGTPEEVANLACFLSSDKSGY  271 (285)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTCT--T-------SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHhCcEEEEEEeCcEecCchhh-cCHHHHHHHHhhCC--C-------CCCCCHHHHHHHHHHHhCCCcCC
Confidence            7653       248999999999998874321 12222222222111  1       237899999999999997643  


Q ss_pred             cCCceEEecCCc
Q 021331          201 ASRQVFNISGEK  212 (314)
Q Consensus       201 ~~~~~~~i~~~~  212 (314)
                      ..|+++++.+|.
T Consensus       272 ~~G~~i~v~gG~  283 (285)
T 2c07_A          272 INGRVFVIDGGL  283 (285)
T ss_dssp             CCSCEEEESTTS
T ss_pred             CCCCEEEeCCCc
Confidence            368899998875

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.73  E-value=2.7e-17  Score=137.11  Aligned_cols=192  Identities=16%  Similarity=0.130  Sum_probs=132.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......        +...++.++.+|++|++++.++++..     ++|+
T Consensus        11 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A           11 TGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAR--------ELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------TTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654321110        01246888999999999888877643     6999


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||....                    +    ++.++..+.  +..++|++||...+...   +....|+.+|...+
T Consensus        83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asK~a~~  159 (254)
T 1hdc_A           83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL---ALTSSYGASKWGVR  159 (254)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---TTCHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC---CCchhHHHHHHHHH
Confidence            9999986321                    1    234555554  56799999997765332   22236899998887


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeee-eHHHHHHHHHHHhcCCc-
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG-HVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~D~a~~~~~~l~~~~-  200 (314)
                      .+.+       ..+++++++||+.++++     +...    .. ...............+. +++|+|++++.++..+. 
T Consensus       160 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~-----~~~~----~~-~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~  229 (254)
T 1hdc_A          160 GLSKLAAVELGTDRIRVNSVHPGMTYTP-----MTAE----TG-IRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSS  229 (254)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCH-----HHHH----HT-CCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHhhhcCeEEEEEecccCcCc-----cccc----cc-hhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhc
Confidence            7753       35899999999999886     2111    11 11000001111122467 89999999999997642 


Q ss_pred             -cCCceEEecCCcc
Q 021331          201 -ASRQVFNISGEKY  213 (314)
Q Consensus       201 -~~~~~~~i~~~~~  213 (314)
                       ..|+++++.++..
T Consensus       230 ~~tG~~~~vdgG~~  243 (254)
T 1hdc_A          230 YVTGAELAVDGGWT  243 (254)
T ss_dssp             TCCSCEEEESTTTT
T ss_pred             CCCCCEEEECCCcc
Confidence             3688999998864

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.73  E-value=7.8e-18  Score=143.20  Aligned_cols=198  Identities=20%  Similarity=0.218  Sum_probs=135.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.........    ..+.....++.++.+|++|++++++++++.     ++|+
T Consensus        53 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  128 (291)
T 3ijr_A           53 TGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETK----QYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNI  128 (291)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHH----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998753211110    111222357899999999999888887643     6899


Q ss_pred             EEEcCCCCc---------------------ccHHHHHHh----CCCCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           76 VYDINGREA---------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        76 vi~~a~~~~---------------------~~~~~~~~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      +||+||...                     .++.+++++    +....++|++||...+.....   ...|+.+|...+.
T Consensus       129 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~---~~~Y~asKaa~~~  205 (291)
T 3ijr_A          129 LVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNET---LIDYSATKGAIVA  205 (291)
T ss_dssp             EEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTT---CHHHHHHHHHHHH
T ss_pred             EEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCC---ChhHHHHHHHHHH
Confidence            999998631                     112334443    334468999999877643322   2268999988887


Q ss_pred             HHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--c
Q 021331          131 VLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--A  201 (314)
Q Consensus       131 ~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~  201 (314)
                      +.+       ..++++..++||.|+++.............         .........+.+++|+|++++.++....  .
T Consensus       206 l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~---------~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~i  276 (291)
T 3ijr_A          206 FTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQ---------FGSNVPMQRPGQPYELAPAYVYLASSDSSYV  276 (291)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHH---------TTTTSTTSSCBCGGGTHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHH---------HHccCCCCCCcCHHHHHHHHHHHhCCccCCC
Confidence            764       348999999999999872100000111111         1122223457789999999999997643  3


Q ss_pred             CCceEEecCCccc
Q 021331          202 SRQVFNISGEKYV  214 (314)
Q Consensus       202 ~~~~~~i~~~~~~  214 (314)
                      .|+++++.+|..+
T Consensus       277 tG~~i~vdGG~~~  289 (291)
T 3ijr_A          277 TGQMIHVNGGVIV  289 (291)
T ss_dssp             CSCEEEESSSCCC
T ss_pred             cCCEEEECCCccc
Confidence            6899999998654

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.73  E-value=1.7e-17  Score=139.07  Aligned_cols=180  Identities=17%  Similarity=0.178  Sum_probs=129.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.                ..++.++.+|++|+++++++++..     ++|+
T Consensus        14 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~   77 (264)
T 2dtx_A           14 TGASMGIGRAIAERFVDEGSKVIDLSIHDPG----------------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISV   77 (264)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEecCccc----------------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654                146788999999999888887643     6999


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||....                    +    ++.++..+.  +..++|++||...+...   +....|+.+|...+
T Consensus        78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~~sK~a~~  154 (264)
T 2dtx_A           78 LVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIIT---KNASAYVTSKHAVI  154 (264)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCC---TTBHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCC---CCchhHHHHHHHHH
Confidence            9999986321                    1    223334443  45799999998765432   22236899999888


Q ss_pred             HHHHh----cC--CceEEEecCeeeCCCCCCchhHHH---------------HHHHHcCCCeecCCCCCceeeeeeHHHH
Q 021331          130 SVLES----KG--VNWTSLRPVYIYGPLNYNPVEEWF---------------FHRLKAGRPIPIPGSGIQVTQLGHVKDL  188 (314)
Q Consensus       130 ~~~~~----~~--~~~~ilR~~~v~g~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~i~~~D~  188 (314)
                      .+.+.    .+  +++++++||.+.++.     ...+               ........         ....+++++|+
T Consensus       155 ~~~~~la~e~~~~i~vn~v~PG~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~~~~~p~dv  220 (264)
T 2dtx_A          155 GLTKSIALDYAPLLRCNAVCPATIDTPL-----VRKAAELEVGSDPMRIEKKISEWGHEH---------PMQRIGKPQEV  220 (264)
T ss_dssp             HHHHHHHHHHTTTSEEEEEEECSBCSHH-----HHHHHHHHHCSCHHHHHHHHHHHHHHS---------TTSSCBCHHHH
T ss_pred             HHHHHHHHHhcCCcEEEEEEeCCCcCcc-----hhhhhhcccccCchhhHHHHHHHHhcC---------CCCCCcCHHHH
Confidence            77642    22  899999999987752     1111               11111111         11247899999


Q ss_pred             HHHHHHHhcCCc--cCCceEEecCCcc
Q 021331          189 ARAFVQVLGNEK--ASRQVFNISGEKY  213 (314)
Q Consensus       189 a~~~~~~l~~~~--~~~~~~~i~~~~~  213 (314)
                      |++++.++..+.  ..|+++++.++..
T Consensus       221 A~~v~~l~s~~~~~~tG~~i~vdGG~~  247 (264)
T 2dtx_A          221 ASAVAFLASREASFITGTCLYVDGGLS  247 (264)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhCchhcCCCCcEEEECCCcc
Confidence            999999997642  3688999998853

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.73  E-value=1.5e-18  Score=146.69  Aligned_cols=194  Identities=20%  Similarity=0.276  Sum_probs=130.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        28 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (277)
T 2rhc_B           28 TGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTL-----KELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDV  102 (277)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865422110     112112356889999999999888877642     6999


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHh------CC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           76 VYDINGREA--------------------DEVEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~------~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      +||+||...                    .++.+++++      +.  +..+||++||...+...   +....|+.+|..
T Consensus       103 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---~~~~~Y~asK~a  179 (277)
T 2rhc_B          103 LVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV---VHAAPYSASKHG  179 (277)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCC---TTCHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCC---CCCccHHHHHHH
Confidence            999998632                    112223333      22  34799999997654221   222368999988


Q ss_pred             HHHHHHh-------cCCceEEEecCeeeCCCCCCchh-----------HHHHHHHHcCCCeecCCCCCceeeeeeHHHHH
Q 021331          128 TESVLES-------KGVNWTSLRPVYIYGPLNYNPVE-----------EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  189 (314)
Q Consensus       128 ~e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  189 (314)
                      .+.+.+.       .++++++++||.+.++.... ..           ..........         .....+++++|+|
T Consensus       180 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~~~dvA  249 (277)
T 2rhc_B          180 VVGFTKALGLELARTGITVNAVCPGFVETPMAAS-VREHYSDIWEVSTEEAFDRITAR---------VPIGRYVQPSEVA  249 (277)
T ss_dssp             HHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHH-HHHHHHHHHTCCHHHHHHHHHHH---------STTSSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhh-hhhhcccccccchHHHHHHHHhc---------CCCCCCcCHHHHH
Confidence            8777642       47999999999998862110 00           0001111111         1113478999999


Q ss_pred             HHHHHHhcCCc--cCCceEEecCCc
Q 021331          190 RAFVQVLGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       190 ~~~~~~l~~~~--~~~~~~~i~~~~  212 (314)
                      ++++.++..+.  ..|+++++.+|.
T Consensus       250 ~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          250 EMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHhCchhcCCCCcEEEECCCc
Confidence            99999997642  368899999885

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.73  E-value=1.1e-17  Score=140.52  Aligned_cols=198  Identities=16%  Similarity=0.199  Sum_probs=134.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+...  ..++.++.+|++|++++.++++..     ++
T Consensus        19 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   93 (267)
T 1iy8_A           19 TGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASK-----AAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRI   93 (267)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            799999999999999999999999999865422110     011111  246889999999999988887643     68


Q ss_pred             cEEEEcCCCCcc-c------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchh
Q 021331           74 DVVYDINGREAD-E------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKL  126 (314)
Q Consensus        74 d~vi~~a~~~~~-~------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~  126 (314)
                      |++||+||.... .                        ++.++..+.  +..++|++||...+...   +....|..+|.
T Consensus        94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asK~  170 (267)
T 1iy8_A           94 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI---GNQSGYAAAKH  170 (267)
T ss_dssp             SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC---SSBHHHHHHHH
T ss_pred             CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC---CCCccHHHHHH
Confidence            999999986321 0                        223444444  56799999997664322   22236899998


Q ss_pred             hHHHHHH-------hcCCceEEEecCeeeCCCCCC-------chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHH
Q 021331          127 NTESVLE-------SKGVNWTSLRPVYIYGPLNYN-------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  192 (314)
Q Consensus       127 ~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  192 (314)
                      ..+.+.+       .+++++++++||.++++....       .........+...         .....+.+.+|+|+++
T Consensus       171 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~~~dvA~~v  241 (267)
T 1iy8_A          171 GVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQV---------NPSKRYGEAPEIAAVV  241 (267)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTT---------CTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhcc---------CCCCCCcCHHHHHHHH
Confidence            8877764       358999999999998762100       0000000011111         1113478899999999


Q ss_pred             HHHhcCCc--cCCceEEecCCcccc
Q 021331          193 VQVLGNEK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       193 ~~~l~~~~--~~~~~~~i~~~~~~s  215 (314)
                      +.++..+.  ..|.++++.+|..++
T Consensus       242 ~~l~s~~~~~~tG~~i~vdGG~~~~  266 (267)
T 1iy8_A          242 AFLLSDDASYVNATVVPIDGGQSAA  266 (267)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred             HHHcCccccCCCCCEEEECCCcccC
Confidence            99987642  368899999987554

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.73  E-value=2e-18  Score=145.19  Aligned_cols=197  Identities=15%  Similarity=0.131  Sum_probs=134.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.+++++.     ++|+
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  108 (270)
T 3ftp_A           34 TGASRGIGRAIALELARRGAMVIGTATTEAGAEGIG-----AAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNV  108 (270)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999865432111     122222357889999999999888887643     7999


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||...                    .++.++.++    +.  +..++|++||...+....   ....|+.+|...+
T Consensus       109 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~asKaa~~  185 (270)
T 3ftp_A          109 LVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNP---GQVNYAAAKAGVA  185 (270)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT---TBHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC---CchhHHHHHHHHH
Confidence            999998632                    122333333    22  556899999976653322   2226899998777


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       ..|+++.+++||.|.++... ..............         ....+.+++|+|++++.++....  
T Consensus       186 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~-~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~~L~s~~~~~  255 (270)
T 3ftp_A          186 GMTRALAREIGSRGITVNCVAPGFIDTDMTK-GLPQEQQTALKTQI---------PLGRLGSPEDIAHAVAFLASPQAGY  255 (270)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCSHHHH-HSCHHHHHHHHTTC---------TTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHhhhCeEEEEEEeCCCcCcchh-hcCHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCCCcCC
Confidence            6653       35899999999998876210 01111122222211         12347789999999999997532  


Q ss_pred             cCCceEEecCCcccc
Q 021331          201 ASRQVFNISGEKYVT  215 (314)
Q Consensus       201 ~~~~~~~i~~~~~~s  215 (314)
                      ..|+++++.+|..+|
T Consensus       256 itG~~i~vdGG~~~s  270 (270)
T 3ftp_A          256 ITGTTLHVNGGMFMS  270 (270)
T ss_dssp             CCSCEEEESTTSSCC
T ss_pred             ccCcEEEECCCcccC
Confidence            368999999987553

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.72  E-value=1.5e-17  Score=138.13  Aligned_cols=194  Identities=16%  Similarity=0.222  Sum_probs=131.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEc-CCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++| +.+......     ..+.....++.++.+|++|++++.++++..     ++|
T Consensus        10 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   84 (246)
T 2uvd_A           10 TGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVV-----DEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVD   84 (246)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            899999999999999999999999998 433321100     111112356889999999999988887643     699


Q ss_pred             EEEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      ++||+||....                    +    ++.++..+.  +..++|++||...+...   |....|..+|...
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asK~a~  161 (246)
T 2uvd_A           85 ILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN---PGQANYVAAKAGV  161 (246)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---TTBHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC---CCCchHHHHHHHH
Confidence            99999986321                    1    233444443  56799999997654321   2223688899877


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      +.+.+       .+++++++++||.+.++.... .............+         ...+.+++|+|++++.++..+. 
T Consensus       162 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~p---------~~~~~~~~dvA~~~~~l~s~~~~  231 (246)
T 2uvd_A          162 IGLTKTSAKELASRNITVNAIAPGFIATDMTDV-LDENIKAEMLKLIP---------AAQFGEAQDIANAVTFFASDQSK  231 (246)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSC-CCTTHHHHHHHTCT---------TCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEeccccCcchhh-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCchhc
Confidence            76643       358999999999998874221 11111111221111         1247889999999999997532 


Q ss_pred             -cCCceEEecCCc
Q 021331          201 -ASRQVFNISGEK  212 (314)
Q Consensus       201 -~~~~~~~i~~~~  212 (314)
                       ..|+++++.+|.
T Consensus       232 ~~tG~~~~vdgG~  244 (246)
T 2uvd_A          232 YITGQTLNVDGGM  244 (246)
T ss_dssp             TCCSCEEEESTTS
T ss_pred             CCCCCEEEECcCc
Confidence             368899998875

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.72  E-value=7.9e-18  Score=142.27  Aligned_cols=200  Identities=16%  Similarity=0.165  Sum_probs=137.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++..+++..     ++|+
T Consensus        14 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   88 (280)
T 3tox_A           14 TGASSGIGRAAALLFAREGAKVVVTARNGNALAELT-----DEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDT   88 (280)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-----HHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999875432111     111222357889999999999888887643     7999


Q ss_pred             EEEcCCCCc---------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~---------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||...                     .++.++.++    +.  +..++|++||...+...  .+....|+.+|...
T Consensus        89 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--~~~~~~Y~asKaa~  166 (280)
T 3tox_A           89 AFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAG--FAGVAPYAASKAGL  166 (280)
T ss_dssp             EEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBC--CTTCHHHHHHHHHH
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCC--CCCchhHHHHHHHH
Confidence            999998531                     112223333    32  45699999997665211  12222699999888


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCch---hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      +.+.+       ..++++..++||.|.++......   .......+....+         ...+.+++|+|++++.++.+
T Consensus       167 ~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~L~s~  237 (280)
T 3tox_A          167 IGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHA---------LKRIARPEEIAEAALYLASD  237 (280)
T ss_dssp             HHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTST---------TSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCc---------cCCCcCHHHHHHHHHHHhCc
Confidence            77764       35899999999999988532111   1122222222221         12477899999999999986


Q ss_pred             Cc--cCCceEEecCCccccH
Q 021331          199 EK--ASRQVFNISGEKYVTF  216 (314)
Q Consensus       199 ~~--~~~~~~~i~~~~~~s~  216 (314)
                      ..  ..|+++++.||..++.
T Consensus       238 ~a~~itG~~i~vdGG~~~~~  257 (280)
T 3tox_A          238 GASFVTGAALLADGGASVTK  257 (280)
T ss_dssp             GGTTCCSCEEEESTTGGGCC
T ss_pred             cccCCcCcEEEECCCccccc
Confidence            43  3689999999987654

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.72  E-value=1.8e-17  Score=140.32  Aligned_cols=207  Identities=14%  Similarity=0.085  Sum_probs=134.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCC-C-------CchhhhhccCceEEEEecCCChhhHHHhhhcC-
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG-E-------SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-   71 (314)
                      |||+|+||.++++.|+++|++|++++|+.+........ .       ....+.....++.++.+|++|++++++++++. 
T Consensus        21 TGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  100 (280)
T 3pgx_A           21 TGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELVADGM  100 (280)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            79999999999999999999999999853221100000 0       00112223467889999999999998887643 


Q ss_pred             ----CccEEEEcCCCCc--------------------ccHHHHHHh----CC--C-CCcEEEEeeceeeccCCCCCccCc
Q 021331           72 ----GFDVVYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCES  120 (314)
Q Consensus        72 ----~~d~vi~~a~~~~--------------------~~~~~~~~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~  120 (314)
                          ++|++||+||...                    .++.+++++    +.  + ..++|++||...+...   +....
T Consensus       101 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~  177 (280)
T 3pgx_A          101 EQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKAT---PGNGH  177 (280)
T ss_dssp             HHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC---TTBHH
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCC---CCchh
Confidence                7999999999732                    112233333    32  2 5689999997665332   22236


Q ss_pred             cccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHc-CCCeecCCCCCceeeeeeHHHHHHHH
Q 021331          121 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA-GRPIPIPGSGIQVTQLGHVKDLARAF  192 (314)
Q Consensus       121 ~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~~  192 (314)
                      |+.+|...+.+.+       .+|+++..++||.+.++................ ...+.. ...... .+.+++|+|+++
T Consensus       178 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-r~~~p~dvA~~v  255 (280)
T 3pgx_A          178 YSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPP-MPVQPN-GFMTADEVADVV  255 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCC-BTTBCS-SCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhh-cccCCC-CCCCHHHHHHHH
Confidence            9999988877653       368999999999999985432111111111000 011111 111122 488999999999


Q ss_pred             HHHhcCCc--cCCceEEecCCc
Q 021331          193 VQVLGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       193 ~~~l~~~~--~~~~~~~i~~~~  212 (314)
                      +.++....  ..|+++++.+|.
T Consensus       256 ~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          256 AWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             HHHHSGGGTTCSSCEEEESTTG
T ss_pred             HHHhCccccCCCCCEEEECCCc
Confidence            99997643  368999999885

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.72  E-value=4.5e-17  Score=136.89  Aligned_cols=186  Identities=15%  Similarity=0.172  Sum_probs=130.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.....               ..+..+.+|++|++++.++++..     ++|+
T Consensus        20 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A           20 TGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV---------------NVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT---------------TSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc---------------CceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999876531               35678899999999988887643     7999


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||...                    .++..+.++    +.  +..++|++||...+.....   ...|+.+|...+
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---~~~Y~asKaa~~  161 (269)
T 3vtz_A           85 LVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKN---AAAYVTSKHALL  161 (269)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTT---CHHHHHHHHHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCC---ChhHHHHHHHHH
Confidence            999998632                    112223333    33  5679999999877654222   226999998888


Q ss_pred             HHHH----hc--CCceEEEecCeeeCCCCCC----------chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHH
Q 021331          130 SVLE----SK--GVNWTSLRPVYIYGPLNYN----------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  193 (314)
Q Consensus       130 ~~~~----~~--~~~~~ilR~~~v~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  193 (314)
                      .+.+    +.  ++++..++||.|.++....          ..............         ....+.+++|+|++++
T Consensus       162 ~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~  232 (269)
T 3vtz_A          162 GLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQH---------PMGRIGRPEEVAEVVA  232 (269)
T ss_dssp             HHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHS---------TTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcC---------CCCCCcCHHHHHHHHH
Confidence            8764    22  7899999999998762100          00011111111111         1234678999999999


Q ss_pred             HHhcCCc--cCCceEEecCCcc
Q 021331          194 QVLGNEK--ASRQVFNISGEKY  213 (314)
Q Consensus       194 ~~l~~~~--~~~~~~~i~~~~~  213 (314)
                      .++....  ..|+++++.+|..
T Consensus       233 ~L~s~~~~~itG~~i~vdGG~~  254 (269)
T 3vtz_A          233 FLASDRSSFITGACLTVDGGLL  254 (269)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHhCCccCCCcCcEEEECCCcc
Confidence            9998643  3689999999864

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.72  E-value=1.4e-17  Score=142.02  Aligned_cols=213  Identities=15%  Similarity=0.122  Sum_probs=140.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccC---ceEEEEecCCChhhHHHhhhcC-----C
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS---KILHLKGDRKDYDFVKSSLSAK-----G   72 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~d~~~l~~~~~~~-----~   72 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....   ++.++.+|++|++++.++++..     +
T Consensus        32 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  106 (297)
T 1xhl_A           32 TGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETK-----QQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGK  106 (297)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            899999999999999999999999999865422110     01111112   6889999999999888887643     6


Q ss_pred             ccEEEEcCCCCcc----------------------cHHHH----HHhCC-CCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           73 FDVVYDINGREAD----------------------EVEPI----LDALP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        73 ~d~vi~~a~~~~~----------------------~~~~~----~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      +|++||+||....                      ++.++    +..+. ...++|++||...+...  .+....|+.+|
T Consensus       107 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~--~~~~~~Y~asK  184 (297)
T 1xhl_A          107 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA--HSGYPYYACAK  184 (297)
T ss_dssp             CCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC--CTTSHHHHHHH
T ss_pred             CCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCC--CCCcchHHHHH
Confidence            9999999986321                      11223    33332 22799999997765432  02223699999


Q ss_pred             hhHHHHHH-------hcCCceEEEecCeeeCCCCCCch-hH--H--HHHHHHc-CCCeecCCCCCceeeeeeHHHHHHHH
Q 021331          126 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EE--W--FFHRLKA-GRPIPIPGSGIQVTQLGHVKDLARAF  192 (314)
Q Consensus       126 ~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~--~--~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~~  192 (314)
                      ...+.+.+       .+|+++++++||.|.++...... ..  .  .-..... ....       ....+.+++|+|+++
T Consensus       185 aa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-------p~~r~~~pedvA~~v  257 (297)
T 1xhl_A          185 AALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECI-------PVGHCGKPEEIANII  257 (297)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTC-------TTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcC-------CCCCCcCHHHHHHHH
Confidence            88877764       36899999999999887311000 00  0  0000111 0111       112478899999999


Q ss_pred             HHHhcCC---ccCCceEEecCCccccHHHHHHHHHHHh
Q 021331          193 VQVLGNE---KASRQVFNISGEKYVTFDGLARACAKAA  227 (314)
Q Consensus       193 ~~~l~~~---~~~~~~~~i~~~~~~s~~el~~~i~~~~  227 (314)
                      +.++..+   ...|+++++.++..+...+.+..+.+++
T Consensus       258 ~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~  295 (297)
T 1xhl_A          258 VFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSVL  295 (297)
T ss_dssp             HHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHHT
T ss_pred             HHHhCCcccCCccCcEEEECCCccccccccccchhhhh
Confidence            9999754   3468899999998777666555555543

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.72  E-value=1.1e-17  Score=139.72  Aligned_cols=200  Identities=18%  Similarity=0.205  Sum_probs=131.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus         8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (256)
T 1geg_A            8 TGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVA-----SEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   82 (256)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865422110     111112346889999999999888887642     6999


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC--C-CCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||....                    +    ++.++..+.  + ..++|++||...+...   |....|..+|...
T Consensus        83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asK~a~  159 (256)
T 1geg_A           83 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN---PELAVYSSSKFAV  159 (256)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---TTBHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC---CCchhHHHHHHHH
Confidence            9999986321                    1    123333333  3 5799999997654221   2223689999888


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHc-----CCC-eecCCCCCceeeeeeHHHHHHHHHHH
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA-----GRP-IPIPGSGIQVTQLGHVKDLARAFVQV  195 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~  195 (314)
                      +.+.+       .+++++++++||.+.++.     ..........     ... ............+.+.+|+|++++.+
T Consensus       160 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l  234 (256)
T 1geg_A          160 RGLTQTAARDLAPLGITVNGYCPGIVKTPM-----WAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYL  234 (256)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBSSHH-----HHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCeEEEEEEECCCccch-----hhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            77764       358999999999998762     1111100000     000 00000001113478999999999999


Q ss_pred             hcCCc--cCCceEEecCCcc
Q 021331          196 LGNEK--ASRQVFNISGEKY  213 (314)
Q Consensus       196 l~~~~--~~~~~~~i~~~~~  213 (314)
                      +..+.  ..|+++.+.+|..
T Consensus       235 ~s~~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          235 ASPDSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             HSGGGTTCCSCEEEESSSSS
T ss_pred             hCccccCCCCCEEEeCCCcc
Confidence            97642  3688999998864

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.72  E-value=1.8e-17  Score=138.68  Aligned_cols=204  Identities=15%  Similarity=0.202  Sum_probs=131.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCChhhHHHhhhc----CCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA----KGFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~----~~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+...  ..++.++.+|++|++++.++++.    .++|
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~gid   87 (260)
T 2z1n_A           13 TAGSSGLGFASALELARNGARLLLFSRNREKLEAAA-----SRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGGAD   87 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            799999999999999999999999999865422110     011110  12688999999999988887763    2599


Q ss_pred             EEEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      ++||+||....                    +    ++.++..+.  +..++|++||...+...   +....|..+|...
T Consensus        88 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~~sK~a~  164 (260)
T 2z1n_A           88 ILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPW---QDLALSNIMRLPV  164 (260)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---TTBHHHHHHTHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCC---CCCchhHHHHHHH
Confidence            99999986321                    1    244455444  56799999998776432   2223688899887


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHH-HHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC-
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFF-HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE-  199 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~-  199 (314)
                      +.+.+       ..++++++++||.++++.....+..... ....................+.+++|+|++++.++..+ 
T Consensus       165 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~  244 (260)
T 2z1n_A          165 IGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLASEKA  244 (260)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCccc
Confidence            77653       3489999999999998853211000000 00000000000001111124778999999999999763 


Q ss_pred             -ccCCceEEecCCc
Q 021331          200 -KASRQVFNISGEK  212 (314)
Q Consensus       200 -~~~~~~~~i~~~~  212 (314)
                       ...|+++++.++.
T Consensus       245 ~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          245 SFITGAVIPVDGGA  258 (260)
T ss_dssp             TTCCSCEEEESTTT
T ss_pred             cCCCCCEEEeCCCc
Confidence             2368899998875

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.72  E-value=2.9e-17  Score=138.64  Aligned_cols=195  Identities=15%  Similarity=0.181  Sum_probs=134.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......        .+...++.++.+|++|+++++++++..     ++|+
T Consensus        33 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           33 TGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVA--------NEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999875432111        112357889999999999988887643     7999


Q ss_pred             EEEcCCCCc--------------------ccH----HHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~----~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||...                    .++    +.++..+.  +..++|++||...+...   +....|+.+|...+
T Consensus       105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asKaa~~  181 (277)
T 4dqx_A          105 LVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAI---ADRTAYVASKGAIS  181 (277)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCC---TTBHHHHHHHHHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCC---CCChhHHHHHHHHH
Confidence            999999632                    112    23333344  45699999997765332   22236999998888


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCC-----CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      .+.+       ..++++..++||.|.++...     .............         ......+.+++|+|++++.++.
T Consensus       182 ~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~r~~~pedvA~~v~~L~s  252 (277)
T 4dqx_A          182 SLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNA---------RAVMDRMGTAEEIAEAMLFLAS  252 (277)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHT---------TSTTCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHh---------cCcccCCcCHHHHHHHHHHHhC
Confidence            7764       35799999999998876200     0000011111111         1122357789999999999997


Q ss_pred             CCc--cCCceEEecCCcccc
Q 021331          198 NEK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~~~s  215 (314)
                      ...  ..|+++++.||..++
T Consensus       253 ~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          253 DRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             GGGTTCCSCEEEESSSSSSC
T ss_pred             CccCCCcCCEEEECCchhhh
Confidence            643  368999999997654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.71  E-value=4.5e-17  Score=135.40  Aligned_cols=193  Identities=13%  Similarity=0.143  Sum_probs=127.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCC-cccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+. +....        .+.+...++.++.+|++|++++.++++..     ++|
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A           13 TGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA--------AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH--------HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH--------HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            79999999999999999999999999987 43221        11122356889999999999888876532     799


Q ss_pred             EEEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      ++||+||....                    +    ++.++..+.  +..++|++||...+...   +....|..+|...
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asK~a~  161 (249)
T 2ew8_A           85 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI---EAYTHYISTKAAN  161 (249)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC---SSCHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC---CCchhHHHHHHHH
Confidence            99999986321                    1    223333343  56799999998776432   2223689999888


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      +.+.+       ..++++++++||.+.++.......... ....  ..+.     .....+.+++|+|++++.++.... 
T Consensus       162 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~--~~~~-----~~~~~~~~p~dva~~~~~l~s~~~~  233 (249)
T 2ew8_A          162 IGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAM-FDVL--PNML-----QAIPRLQVPLDLTGAAAFLASDDAS  233 (249)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCC---------------------CTT-----SSSCSCCCTHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccch-hhHH--HHhh-----CccCCCCCHHHHHHHHHHHcCcccC
Confidence            87764       258999999999998874220110000 0000  0000     112347889999999999997532 


Q ss_pred             -cCCceEEecCCc
Q 021331          201 -ASRQVFNISGEK  212 (314)
Q Consensus       201 -~~~~~~~i~~~~  212 (314)
                       ..|+++++.++.
T Consensus       234 ~~tG~~~~vdGG~  246 (249)
T 2ew8_A          234 FITGQTLAVDGGM  246 (249)
T ss_dssp             TCCSCEEEESSSC
T ss_pred             CCCCcEEEECCCc
Confidence             368899998875

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.71  E-value=1.5e-17  Score=139.20  Aligned_cols=204  Identities=16%  Similarity=0.151  Sum_probs=129.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcc-cccCCCCCCchhhhhc-cCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+||.++++.|+++|++|++++|+.+. .....     ..+... ..++.++.+|++|++++.++++..     ++
T Consensus        10 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   84 (260)
T 1x1t_A           10 TGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVR-----AGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRI   84 (260)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHH-----HHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             eCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHH-----HHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            8999999999999999999999999998654 22110     011111 246888999999999888887642     69


Q ss_pred             cEEEEcCCCCcc--------------------cH----HHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           74 DVVYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        74 d~vi~~a~~~~~--------------------~~----~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      |++||+||....                    ++    +.++..+.  +..+||++||...+...   +....|+.+|..
T Consensus        85 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~~sK~a  161 (260)
T 1x1t_A           85 DILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS---ANKSAYVAAKHG  161 (260)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---TTCHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC---CCCchHHHHHHH
Confidence            999999986321                    12    22333333  56799999997765332   222368999998


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHH-c-CCCeecC-CCCCceeeeeeHHHHHHHHHHHhc
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK-A-GRPIPIP-GSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~-~-~~~~~~~-~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      .+.+.+       ..++++++++||.+.++..... ......... . ....... ........+.+++|+|++++.++.
T Consensus       162 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s  240 (260)
T 1x1t_A          162 VVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ-ISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS  240 (260)
T ss_dssp             HHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------CHHHHCTTCCCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHhccCCEEEEEEeecCccCchHHHh-hhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhC
Confidence            887764       2479999999999998742211 000000000 0 0000000 000112357899999999999997


Q ss_pred             CCc--cCCceEEecCCcc
Q 021331          198 NEK--ASRQVFNISGEKY  213 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~~  213 (314)
                      ...  ..|+++++.++..
T Consensus       241 ~~~~~~tG~~~~vdgG~~  258 (260)
T 1x1t_A          241 DAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             GGGTTCCSCEEEESTTGG
T ss_pred             hhhcCCCCCEEEECCCcc
Confidence            532  3688999998854

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.71  E-value=2.8e-17  Score=138.39  Aligned_cols=196  Identities=19%  Similarity=0.237  Sum_probs=132.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.......+.    ..+.....++.++.+|++|++++.+++++.     ++|+
T Consensus        35 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~  110 (271)
T 4iin_A           35 TGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALK----NELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSY  110 (271)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            8999999999999999999999999996544221111    122222357899999999999888887643     7999


Q ss_pred             EEEcCCCCcc--------------------cH----HHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||....                    ++    +.++..+.  +..++|++||...+....   ....|+.+|...+
T Consensus       111 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~asK~a~~  187 (271)
T 4iin_A          111 LVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNM---GQTNYSASKGGMI  187 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT---TCHHHHHHHHHHH
T ss_pred             EEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCC---CchHhHHHHHHHH
Confidence            9999997321                    12    22333333  557999999976653322   2226899998888


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       ..++++..++||.+..+....     +...... .    .........+.+++|+|++++.++..+.  
T Consensus       188 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-----~~~~~~~-~----~~~~~~~~~~~~p~dvA~~i~~l~s~~~~~  257 (271)
T 4iin_A          188 AMSKSFAYEGALRNIRFNSVTPGFIETDMNAN-----LKDELKA-D----YVKNIPLNRLGSAKEVAEAVAFLLSDHSSY  257 (271)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCCC----------------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHhCcEEEEEEeCcccCCchhh-----hcHHHHH-H----HHhcCCcCCCcCHHHHHHHHHHHhCCCcCC
Confidence            7763       257999999999998763211     1111100 0    0111122457889999999999998643  


Q ss_pred             cCCceEEecCCcc
Q 021331          201 ASRQVFNISGEKY  213 (314)
Q Consensus       201 ~~~~~~~i~~~~~  213 (314)
                      ..|+++++.||..
T Consensus       258 itG~~i~vdGG~~  270 (271)
T 4iin_A          258 ITGETLKVNGGLY  270 (271)
T ss_dssp             CCSCEEEESTTSC
T ss_pred             CcCCEEEeCCCee
Confidence            3789999998853

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.71  E-value=3e-17  Score=136.88  Aligned_cols=198  Identities=20%  Similarity=0.194  Sum_probs=136.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......        .+...++.++.+|++|++++.++++..     ++|+
T Consensus        14 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A           14 IGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIR--------EEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865532111        112357899999999999888777543     7999


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHhC----CCCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           76 VYDINGREAD--------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      +||+||....                    ++..+.+++    +...++|++||...+...   |....|+.+|...+.+
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asKaa~~~~  162 (255)
T 4eso_A           86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGH---PGMSVYSASKAALVSF  162 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBC---TTBHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCC---CCchHHHHHHHHHHHH
Confidence            9999987421                    122333333    234589999997765432   2223699999888777


Q ss_pred             HH-------hcCCceEEEecCeeeCCCCCC-ch----hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          132 LE-------SKGVNWTSLRPVYIYGPLNYN-PV----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       132 ~~-------~~~~~~~ilR~~~v~g~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      .+       .+|+++..++||.+.++.... ..    ...+........+         ...+.+++|+|++++.++...
T Consensus       163 ~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~L~s~~  233 (255)
T 4eso_A          163 ASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITP---------MKRNGTADEVARAVLFLAFEA  233 (255)
T ss_dssp             HHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHST---------TSSCBCHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCC---------CCCCcCHHHHHHHHHHHcCcC
Confidence            63       358999999999999884321 11    1111122221111         123668999999999998752


Q ss_pred             -ccCCceEEecCCccccHHH
Q 021331          200 -KASRQVFNISGEKYVTFDG  218 (314)
Q Consensus       200 -~~~~~~~~i~~~~~~s~~e  218 (314)
                       ...|+++++.||...++.+
T Consensus       234 ~~itG~~i~vdGG~~~~l~~  253 (255)
T 4eso_A          234 TFTTGAKLAVDGGLGQKLST  253 (255)
T ss_dssp             TTCCSCEEEESTTTTTTBCC
T ss_pred             cCccCCEEEECCCccccCcC
Confidence             2378999999998766443

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.71  E-value=2.2e-17  Score=139.10  Aligned_cols=197  Identities=17%  Similarity=0.201  Sum_probs=124.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|+++.++.......+    ...+.+...++.++.+|++|++++.++++..     ++|+
T Consensus        32 TGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~  107 (272)
T 4e3z_A           32 TGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAV----VAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDG  107 (272)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHH----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            899999999999999999999988744433211111    0122222467899999999999988888644     7899


Q ss_pred             EEEcCCCCcc---------------------cHHHHH----HhCC-----CCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           76 VYDINGREAD---------------------EVEPIL----DALP-----NLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        76 vi~~a~~~~~---------------------~~~~~~----~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      |||+||....                     ++..++    ..+.     +..+||++||...+....  +....|+.+|
T Consensus       108 li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--~~~~~Y~asK  185 (272)
T 4e3z_A          108 LVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA--TQYVDYAASK  185 (272)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT--TTCHHHHHHH
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC--CCcchhHHHH
Confidence            9999986321                     122222    2222     245899999976653221  1112589999


Q ss_pred             hhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          126 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       126 ~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      ...+.+.+       ..+++++.++||.|.++................         ......+.+++|+|++++.++..
T Consensus       186 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~---------~~~~~~~~~~edvA~~i~~l~s~  256 (272)
T 4e3z_A          186 AAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAP---------SVPMQRAGMPEEVADAILYLLSP  256 (272)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBC---------------------------CCTTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhh---------cCCcCCCcCHHHHHHHHHHHhCC
Confidence            98887653       348999999999999874322111111111111         11123466799999999999975


Q ss_pred             Cc--cCCceEEecCCc
Q 021331          199 EK--ASRQVFNISGEK  212 (314)
Q Consensus       199 ~~--~~~~~~~i~~~~  212 (314)
                      ..  ..|++|++.+|.
T Consensus       257 ~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          257 SASYVTGSILNVSGGR  272 (272)
T ss_dssp             GGTTCCSCEEEESTTC
T ss_pred             ccccccCCEEeecCCC
Confidence            33  368899998873

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.71  E-value=3.9e-17  Score=137.05  Aligned_cols=191  Identities=17%  Similarity=0.236  Sum_probs=130.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.....        ..+...++.++.+|++|+++++++++..     ++|+
T Consensus        33 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (266)
T 3grp_A           33 TGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEI--------AADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI  104 (266)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            89999999999999999999999999986553211        1112357899999999999888887643     7999


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||....                    +    ++.++..+.  +..++|++||...+...   +....|+.+|...+
T Consensus       105 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~---~~~~~Y~asKaa~~  181 (266)
T 3grp_A          105 LVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN---PGQTNYCAAKAGLI  181 (266)
T ss_dssp             EEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC----------CHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCC---CCchhHHHHHHHHH
Confidence            9999997421                    1    333444443  56799999997654321   12226899998777


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       ..++++..++||.+.++.... ........+....+         ...+.+.+|+|++++.++....  
T Consensus       182 ~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p---------~~r~~~~edvA~~v~~L~s~~~~~  251 (266)
T 3grp_A          182 GFSKALAQEIASRNITVNCIAPGFIKSAMTDK-LNEKQKEAIMAMIP---------MKRMGIGEEIAFATVYLASDEAAY  251 (266)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT-CCHHHHHHHHTTCT---------TCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCccccC
Confidence            6653       358999999999998762111 11222222332222         1346779999999999997643  


Q ss_pred             cCCceEEecCCc
Q 021331          201 ASRQVFNISGEK  212 (314)
Q Consensus       201 ~~~~~~~i~~~~  212 (314)
                      ..|+++++.+|.
T Consensus       252 itG~~i~vdGG~  263 (266)
T 3grp_A          252 LTGQTLHINGGM  263 (266)
T ss_dssp             CCSCEEEESTTC
T ss_pred             ccCCEEEECCCe
Confidence            368999999885

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.71  E-value=2.6e-17  Score=137.44  Aligned_cols=196  Identities=17%  Similarity=0.229  Sum_probs=133.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCC-cccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|+++++.. .......     ..+.....++.++.+|++|+++++++++..     ++|
T Consensus        19 TGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   93 (256)
T 3ezl_A           19 TGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWL-----EDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEID   93 (256)
T ss_dssp             TTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHH-----HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-----HHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCCC
Confidence            89999999999999999999999988443 3321111     112222357889999999999888887643     689


Q ss_pred             EEEEcCCCCc--------------------cc----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      ++||+||...                    .+    ++.++..+.  +..++|++||...+....   ....|+.+|...
T Consensus        94 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~asK~a~  170 (256)
T 3ezl_A           94 VLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQF---GQTNYSTAKAGI  170 (256)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCS---CCHHHHHHHHHH
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCC---CCcccHHHHHHH
Confidence            9999998632                    11    223333333  557899999976654322   222689999877


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      +.+.+       ..++++..++||.+.++.... ........+....+.         ..+.+.+|+|++++.++.... 
T Consensus       171 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~s~~~~  240 (256)
T 3ezl_A          171 HGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA-IRPDVLEKIVATIPV---------RRLGSPDEIGSIVAWLASEESG  240 (256)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHHHSTT---------SSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHhCCEEEEEEECcccCccccc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCCccc
Confidence            76653       357999999999988763111 122223333222221         246679999999999987532 


Q ss_pred             -cCCceEEecCCccc
Q 021331          201 -ASRQVFNISGEKYV  214 (314)
Q Consensus       201 -~~~~~~~i~~~~~~  214 (314)
                       ..|+++++.+|..+
T Consensus       241 ~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          241 FSTGADFSLNGGLHM  255 (256)
T ss_dssp             TCCSCEEEESTTSCC
T ss_pred             CCcCcEEEECCCEeC
Confidence             36899999998654

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.71  E-value=3.3e-17  Score=138.54  Aligned_cols=198  Identities=18%  Similarity=0.274  Sum_probs=124.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.........    ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        35 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  110 (280)
T 4da9_A           35 TGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVI----AELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDC  110 (280)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHH----HHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCE
T ss_pred             ecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999975433111110    122222457899999999999888887643     7999


Q ss_pred             EEEcCCCC--c--------------------ccH----HHHHHhCC--C---CCcEEEEeeceeeccCCCCCccCccccc
Q 021331           76 VYDINGRE--A--------------------DEV----EPILDALP--N---LEQFIYCSSAGVYLKSDLLPHCESRHKG  124 (314)
Q Consensus        76 vi~~a~~~--~--------------------~~~----~~~~~~~~--~---~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (314)
                      +||+||..  .                    .++    +.++..+.  +   ..++|++||...+...   +....|+.+
T Consensus       111 lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~---~~~~~Y~as  187 (280)
T 4da9_A          111 LVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS---PERLDYCMS  187 (280)
T ss_dssp             EEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC----------CCHHHHHH
T ss_pred             EEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC---CCccHHHHH
Confidence            99999872  1                    112    22333332  2   4589999997665322   222269999


Q ss_pred             hhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          125 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       125 k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      |...+.+.+       ..++++..++||.|.++.... ...........        .......+.+++|+|++++.++.
T Consensus       188 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~--------~~~p~~r~~~pedvA~~v~~L~s  258 (280)
T 4da9_A          188 KAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAA-VSGKYDGLIES--------GLVPMRRWGEPEDIGNIVAGLAG  258 (280)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------------CCBCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhh-cchhHHHHHhh--------cCCCcCCcCCHHHHHHHHHHHhC
Confidence            988877764       257999999999998873211 11111111100        01222457789999999999998


Q ss_pred             CCc--cCCceEEecCCccc
Q 021331          198 NEK--ASRQVFNISGEKYV  214 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~~~  214 (314)
                      ...  ..|+++++.||..+
T Consensus       259 ~~~~~itG~~i~vdGG~~~  277 (280)
T 4da9_A          259 GQFGFATGSVIQADGGLSI  277 (280)
T ss_dssp             STTGGGTTCEEEESTTCC-
T ss_pred             ccccCCCCCEEEECCCccc
Confidence            643  37899999998654

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.71  E-value=7.1e-17  Score=137.10  Aligned_cols=212  Identities=17%  Similarity=0.176  Sum_probs=136.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCc-------hhhhhccCceEEEEecCCChhhHHHhhhcC--
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~--   71 (314)
                      |||+|+||.++++.|+++|++|++++|+.............       ..+.....++.++.+|++|++++.+++++.  
T Consensus        16 TGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   95 (287)
T 3pxx_A           16 TGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVA   95 (287)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             eCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            79999999999999999999999999884332111110000       112223467899999999999988877643  


Q ss_pred             ---CccEEEEcCCCCc------------------ccHHHHHHh----CCCCCcEEEEeeceeeccCCCC--------Ccc
Q 021331           72 ---GFDVVYDINGREA------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLL--------PHC  118 (314)
Q Consensus        72 ---~~d~vi~~a~~~~------------------~~~~~~~~~----~~~~~~~i~~Ss~~v~~~~~~~--------~~~  118 (314)
                         ++|++||+||...                  .++.+++++    +.+..++|++||...+......        +..
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~  175 (287)
T 3pxx_A           96 EFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGG  175 (287)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-----CHHHH
T ss_pred             HcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccccccCCCcc
Confidence               7999999999632                  112333333    3345689999997665322111        111


Q ss_pred             CccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcC---CC-----eecCCCCCceeeee
Q 021331          119 ESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG---RP-----IPIPGSGIQVTQLG  183 (314)
Q Consensus       119 e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~i  183 (314)
                      ..|+.+|...+.+.+       ..++++..++||.|.++.......   .......   ..     ..+.........+.
T Consensus       176 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (287)
T 3pxx_A          176 AGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPM---YRQFRPDLEAPSRADALLAFPAMQAMPTPYV  252 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHH---HHHHCTTSSSCCHHHHHHHGGGGCSSSCSCB
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccch---hhhhccccccchhHHHHhhhhhhcccCCCCC
Confidence            168999988887763       248999999999999885322110   0111000   00     00000011114688


Q ss_pred             eHHHHHHHHHHHhcCCc--cCCceEEecCCcccc
Q 021331          184 HVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       184 ~~~D~a~~~~~~l~~~~--~~~~~~~i~~~~~~s  215 (314)
                      +++|+|++++.++....  ..|+++++.||..++
T Consensus       253 ~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          253 EASDISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             CHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence            99999999999997532  368999999997654

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.71  E-value=7.9e-17  Score=133.58  Aligned_cols=190  Identities=18%  Similarity=0.188  Sum_probs=130.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......         . .++.++.+|++|+++++++++..     ++|+
T Consensus        11 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---------~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (245)
T 1uls_A           11 TGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE---------A-VGAHPVVMDVADPASVERGFAEALAHLGRLDG   80 (245)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---------T-TTCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---------H-cCCEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654321110         0 13788999999999988887642     5899


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||....                    +    ++.++..+.  +..++|++||...++..    ....|..+|...+
T Consensus        81 lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----~~~~Y~asK~a~~  156 (245)
T 1uls_A           81 VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL----GQANYAASMAGVV  156 (245)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT----TCHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCC----CchhHHHHHHHHH
Confidence            9999986321                    1    222333343  46799999998743322    2225888888776


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       ..++++++++||.+..+.... +............+  .       ..+.+.+|+|++++.++..+.  
T Consensus       157 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~p--~-------~~~~~~~dvA~~v~~l~s~~~~~  226 (245)
T 1uls_A          157 GLTRTLALELGRWGIRVNTLAPGFIETRMTAK-VPEKVREKAIAATP--L-------GRAGKPLEVAYAALFLLSDESSF  226 (245)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS-SCHHHHHHHHHTCT--T-------CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh-cCHHHHHHHHhhCC--C-------CCCcCHHHHHHHHHHHhCchhcC
Confidence            6653       358999999999998874321 11222222222111  1       137789999999999997632  


Q ss_pred             cCCceEEecCCccc
Q 021331          201 ASRQVFNISGEKYV  214 (314)
Q Consensus       201 ~~~~~~~i~~~~~~  214 (314)
                      ..|+.+.+.++..+
T Consensus       227 ~tG~~~~vdgG~~~  240 (245)
T 1uls_A          227 ITGQVLFVDGGRTI  240 (245)
T ss_dssp             CCSCEEEESTTTTT
T ss_pred             CcCCEEEECCCccc
Confidence            36889999988643

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.71  E-value=5e-17  Score=136.36  Aligned_cols=187  Identities=18%  Similarity=0.197  Sum_probs=129.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.....                ....+.+|++|.+++..+++..     ++|+
T Consensus        34 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~----------------~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~   97 (266)
T 3uxy_A           34 TGAAGGIGGAVVTALRAAGARVAVADRAVAGIA----------------ADLHLPGDLREAAYADGLPGAVAAGLGRLDI   97 (266)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC----------------CSEECCCCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----------------hhhccCcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            899999999999999999999999999865522                1234478999998887776532     7999


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||...                    .++.++++++    .  +..++|++||...+...   +....|+.+|...+
T Consensus        98 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---~~~~~Y~asKaa~~  174 (266)
T 3uxy_A           98 VVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPG---PGHALYCLTKAALA  174 (266)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCC---TTBHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC---CCChHHHHHHHHHH
Confidence            999999742                    1223344443    3  56799999997665322   22226999999888


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCc------hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNP------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      .+.+       ..|+++.+++||.+.++.....      ........+..         ......+.+++|+|++++.++
T Consensus       175 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~  245 (266)
T 3uxy_A          175 SLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGR---------TVPLGRIAEPEDIADVVLFLA  245 (266)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHT---------TSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHh
Confidence            7763       3589999999999988621000      00011111111         112235778999999999999


Q ss_pred             cCCc--cCCceEEecCCcccc
Q 021331          197 GNEK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       197 ~~~~--~~~~~~~i~~~~~~s  215 (314)
                      ....  ..|+++++.+|..++
T Consensus       246 s~~~~~itG~~i~vdGG~~~s  266 (266)
T 3uxy_A          246 SDAARYLCGSLVEVNGGKAVA  266 (266)
T ss_dssp             SGGGTTCCSCEEEESTTCCCC
T ss_pred             CchhcCCcCCEEEECcCEeCC
Confidence            8643  368999999987653

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.71  E-value=1.2e-16  Score=132.63  Aligned_cols=192  Identities=17%  Similarity=0.200  Sum_probs=133.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......        ........++.+|++|+++++++++..     ++|+
T Consensus        15 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   86 (248)
T 3op4_A           15 TGASRGIGKAIAELLAERGAKVIGTATSESGAQAIS--------DYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI   86 (248)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999875532111        111246788999999999988887643     7999


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||....                    ++.++.++    +.  +..++|++||...+....   ....|+.+|...+
T Consensus        87 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~---~~~~Y~asK~a~~  163 (248)
T 3op4_A           87 LVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNA---GQANYAAAKAGVI  163 (248)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT---TCHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCC---CChHHHHHHHHHH
Confidence            9999996321                    12233333    32  557999999966553322   2226899998777


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       .+++++..++||.+..+.... .............+         ...+.+++|+|++++.++....  
T Consensus       164 ~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~p---------~~r~~~p~dva~~v~~L~s~~~~~  233 (248)
T 3op4_A          164 GFTKSMAREVASRGVTVNTVAPGFIETDMTKA-LNDEQRTATLAQVP---------AGRLGDPREIASAVAFLASPEAAY  233 (248)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBSSTTTTT-SCHHHHHHHHHTCT---------TCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHhCeEEEEEeeCCCCCchhhh-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCCccCC
Confidence            6653       358999999999998874322 11222222222221         1347789999999999997643  


Q ss_pred             cCCceEEecCCcc
Q 021331          201 ASRQVFNISGEKY  213 (314)
Q Consensus       201 ~~~~~~~i~~~~~  213 (314)
                      ..|+++++.+|..
T Consensus       234 itG~~i~vdgG~~  246 (248)
T 3op4_A          234 ITGETLHVNGGMY  246 (248)
T ss_dssp             CCSCEEEESTTSS
T ss_pred             ccCcEEEECCCee
Confidence            2689999998863

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.71  E-value=3.5e-17  Score=137.30  Aligned_cols=194  Identities=16%  Similarity=0.188  Sum_probs=131.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......        .+...++.++.+|++|++++.++++..     ++|+
T Consensus        18 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           18 TGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQA--------KKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHH--------HHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHH--------HHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            799999999999999999999999999876532111        111256899999999999998887643     7999


Q ss_pred             EEEcCCCCcc--------------------------cHHHHHHh----CC--------CCCcEEEEeeceeeccCCCCCc
Q 021331           76 VYDINGREAD--------------------------EVEPILDA----LP--------NLEQFIYCSSAGVYLKSDLLPH  117 (314)
Q Consensus        76 vi~~a~~~~~--------------------------~~~~~~~~----~~--------~~~~~i~~Ss~~v~~~~~~~~~  117 (314)
                      |||+||....                          ++.+++++    +.        +..+||++||...+....   .
T Consensus        90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---~  166 (265)
T 2o23_A           90 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV---G  166 (265)
T ss_dssp             EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT---T
T ss_pred             EEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCC---C
Confidence            9999986311                          12223333    22        246899999987764322   1


Q ss_pred             cCccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHH
Q 021331          118 CESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  190 (314)
Q Consensus       118 ~e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  190 (314)
                      ...|..+|...+.+.+       ..++++++++||.+.++.... .............  +..      ..+++.+|+|+
T Consensus       167 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~--~~~------~~~~~~~dva~  237 (265)
T 2o23_A          167 QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS-LPEKVCNFLASQV--PFP------SRLGDPAEYAH  237 (265)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTC--SSS------CSCBCHHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc-cCHHHHHHHHHcC--CCc------CCCCCHHHHHH
Confidence            2268999987777653       358999999999998873211 1011111111111  110      24778999999


Q ss_pred             HHHHHhcCCccCCceEEecCCccc
Q 021331          191 AFVQVLGNEKASRQVFNISGEKYV  214 (314)
Q Consensus       191 ~~~~~l~~~~~~~~~~~i~~~~~~  214 (314)
                      +++.++..+...|+.+++.++..+
T Consensus       238 ~~~~l~~~~~~~G~~i~vdgG~~~  261 (265)
T 2o23_A          238 LVQAIIENPFLNGEVIRLDGAIRM  261 (265)
T ss_dssp             HHHHHHHCTTCCSCEEEESTTCCC
T ss_pred             HHHHHhhcCccCceEEEECCCEec
Confidence            999999876667899999998654

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.71  E-value=1.4e-17  Score=139.76  Aligned_cols=198  Identities=16%  Similarity=0.225  Sum_probs=133.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhh-hccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+........     ..+. ....++.++.+|++|+++++++++..     .+|
T Consensus        20 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   94 (265)
T 1h5q_A           20 TGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVT-----EKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPIS   94 (265)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHH-----HHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEE
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHH-----HHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            799999999999999999999999999755422111     0111 11357889999999999888877632     489


Q ss_pred             EEEEcCCCCc--------------------ccHHHHHHhCC------C-CCcEEEEeeceeeccCC--CCCc--cCcccc
Q 021331           75 VVYDINGREA--------------------DEVEPILDALP------N-LEQFIYCSSAGVYLKSD--LLPH--CESRHK  123 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~~~~~~~------~-~~~~i~~Ss~~v~~~~~--~~~~--~e~~~~  123 (314)
                      +|||+||...                    .++.++++++.      + ..+||++||...+....  ..+.  ...|+.
T Consensus        95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~Y~~  174 (265)
T 1h5q_A           95 GLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNS  174 (265)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHH
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccccccHH
Confidence            9999998632                    11233444432      2 47899999976643211  0000  126899


Q ss_pred             chhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          124 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       124 ~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      +|...+.+.+       ..+++++++||+.++++.... .............+         ...+++++|+|++++.++
T Consensus       175 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~  244 (265)
T 1h5q_A          175 SKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH-MDKKIRDHQASNIP---------LNRFAQPEEMTGQAILLL  244 (265)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-SCHHHHHHHHHTCT---------TSSCBCGGGGHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccc-cchhHHHHHHhcCc---------ccCCCCHHHHHHHHHhhc
Confidence            9998887764       248999999999999874321 11222222222211         124778999999999999


Q ss_pred             cCCc--cCCceEEecCCcc
Q 021331          197 GNEK--ASRQVFNISGEKY  213 (314)
Q Consensus       197 ~~~~--~~~~~~~i~~~~~  213 (314)
                      ..+.  ..|+.|++.+|..
T Consensus       245 ~~~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          245 SDHATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             SGGGTTCCSCEEEECTTGG
T ss_pred             cCchhcCcCcEEEecCCEe
Confidence            7643  3688999999864

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.71  E-value=2.8e-17  Score=137.62  Aligned_cols=199  Identities=18%  Similarity=0.142  Sum_probs=127.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......        .+....+.++.+|++|++++++++++.     ++|+
T Consensus        15 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A           15 TGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVA--------GEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--------HHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999876532111        112357899999999999988888644     7899


Q ss_pred             EEEcCCCCc---------------------ccHHHHHHh----CC------CCCcEEEEeeceeeccCCCCCccCccccc
Q 021331           76 VYDINGREA---------------------DEVEPILDA----LP------NLEQFIYCSSAGVYLKSDLLPHCESRHKG  124 (314)
Q Consensus        76 vi~~a~~~~---------------------~~~~~~~~~----~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (314)
                      +||+||...                     .++.++.++    +.      ...++|++||...+...   +....|..+
T Consensus        87 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---~~~~~Y~as  163 (261)
T 3n74_A           87 LVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPR---PNLAWYNAT  163 (261)
T ss_dssp             EEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCC---TTCHHHHHH
T ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCC---CCccHHHHH
Confidence            999998632                     112222222    22      13469999997655322   222258999


Q ss_pred             hhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          125 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       125 k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      |...+.+.+       .+++++..++|+.+.++....     +..... ...............+++++|+|++++.+++
T Consensus       164 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  237 (261)
T 3n74_A          164 KGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTT-----FMGEDS-EEIRKKFRDSIPMGRLLKPDDLAEAAAFLCS  237 (261)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------------CTTSSCCCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhh-----hcccCc-HHHHHHHhhcCCcCCCcCHHHHHHHHHHHcC
Confidence            988877763       358999999999998873211     110000 0000011122223468899999999999997


Q ss_pred             CCc--cCCceEEecCCccccH
Q 021331          198 NEK--ASRQVFNISGEKYVTF  216 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~~~s~  216 (314)
                      ...  ..|+++++.+|..++.
T Consensus       238 ~~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          238 PQASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             GGGTTCCSCEEEESTTTTC--
T ss_pred             CcccCcCCcEEEecCCcccCC
Confidence            533  3789999999987654

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.70  E-value=7.4e-17  Score=133.93  Aligned_cols=185  Identities=19%  Similarity=0.260  Sum_probs=124.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+...                .+..+.+|++|++++.++++..     ++|+
T Consensus        21 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------------~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   84 (247)
T 1uzm_A           21 TGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK----------------GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV   84 (247)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----------------TSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH----------------HhcCeeccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421                1223789999999888887642     6899


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||....                    ++.+++++    +.  +..++|++||...+...   +....|..+|...+
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~~sK~a~~  161 (247)
T 1uzm_A           85 LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI---GNQANYAASKAGVI  161 (247)
T ss_dssp             EEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC--------CCHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC---CCChhHHHHHHHHH
Confidence            9999986321                    12233333    32  55799999997654221   11226899998777


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       .+++++++++||.+.++... .+...........  .+       ...+.+.+|+|++++.++..+.  
T Consensus       162 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-~~~~~~~~~~~~~--~p-------~~~~~~~~dvA~~~~~l~s~~~~~  231 (247)
T 1uzm_A          162 GMARSIARELSKANVTANVVAPGYIDTDMTR-ALDERIQQGALQF--IP-------AKRVGTPAEVAGVVSFLASEDASY  231 (247)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-HSCHHHHHHHGGG--CT-------TCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHhhhcCcEEEEEEeCCCcccchh-hcCHHHHHHHHhc--CC-------CCCCcCHHHHHHHHHHHcCccccC
Confidence            7654       35899999999998765210 0001111111111  11       1247899999999999997532  


Q ss_pred             cCCceEEecCCccc
Q 021331          201 ASRQVFNISGEKYV  214 (314)
Q Consensus       201 ~~~~~~~i~~~~~~  214 (314)
                      ..|+++++.++..+
T Consensus       232 ~~G~~i~vdgG~~~  245 (247)
T 1uzm_A          232 ISGAVIPVDGGMGM  245 (247)
T ss_dssp             CCSCEEEESTTTTC
T ss_pred             CcCCEEEECCCccc
Confidence            36889999988644

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.70  E-value=1.3e-17  Score=142.81  Aligned_cols=197  Identities=12%  Similarity=0.189  Sum_probs=131.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh-----ccCceEEEEecCCChhhHHHhhhcC----
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-----FSSKILHLKGDRKDYDFVKSSLSAK----   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~d~~~l~~~~~~~----   71 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+..     ...++.++.+|++|++++.++++..    
T Consensus        24 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   98 (303)
T 1yxm_A           24 TGGATGIGKAIVKELLELGSNVVIASRKLERLKSAA-----DELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF   98 (303)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHc
Confidence            799999999999999999999999999865422100     01110     1357899999999999998888642    


Q ss_pred             -CccEEEEcCCCCc--------------------ccHHHHHHhCC------CCCcEEEEeeceeeccCCCCCccCccccc
Q 021331           72 -GFDVVYDINGREA--------------------DEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCESRHKG  124 (314)
Q Consensus        72 -~~d~vi~~a~~~~--------------------~~~~~~~~~~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (314)
                       ++|+|||+||...                    .++.++++++.      +..++|++||...++    .|....|+.+
T Consensus        99 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~Y~~s  174 (303)
T 1yxm_A           99 GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG----FPLAVHSGAA  174 (303)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC----CTTCHHHHHH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccC----CCcchhhHHH
Confidence             5999999998521                    12334444432      356899999977222    2223368888


Q ss_pred             hhhHHHHHH-------hcCCceEEEecCeeeCCCCCCch---hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHH
Q 021331          125 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       125 k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                      |...+.+.+       ..+++++++||+.++++......   ...........         .....+.+++|+|++++.
T Consensus       175 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~p~~~~~~~~dvA~~i~~  245 (303)
T 1yxm_A          175 RAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK---------IPAKRIGVPEEVSSVVCF  245 (303)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG---------STTSSCBCTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhc---------CcccCCCCHHHHHHHHHH
Confidence            877766653       24899999999999998311111   01011101000         111247889999999999


Q ss_pred             HhcCCc--cCCceEEecCCcccc
Q 021331          195 VLGNEK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       195 ~l~~~~--~~~~~~~i~~~~~~s  215 (314)
                      ++....  ..|+.+++.++..++
T Consensus       246 l~~~~~~~~~G~~~~v~gG~~~~  268 (303)
T 1yxm_A          246 LLSPAASFITGQSVDVDGGRSLY  268 (303)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HhCcccccCCCcEEEECCCeecc
Confidence            997533  368899999987543

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.70  E-value=6.8e-17  Score=135.29  Aligned_cols=200  Identities=13%  Similarity=0.110  Sum_probs=134.4

Q ss_pred             CCcc--cccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+  |+||.++++.|+++|++|++++|+.+. ...+     ..+.....++.++.+|++|++++.++++..     ++
T Consensus        14 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~-----~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (261)
T 2wyu_A           14 MGVTNQRSLGFAIAAKLKEAGAEVALSYQAERL-RPEA-----EKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGL   87 (261)
T ss_dssp             ESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGG-HHHH-----HHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHH-----HHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            7998  999999999999999999999998641 1000     111111134788999999999888887643     68


Q ss_pred             cEEEEcCCCCcc------------------------cHHHHHHhCC----CCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           74 DVVYDINGREAD------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~~~~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      |++||+||....                        ++.++++++.    ...++|++||...+...   +....|+.+|
T Consensus        88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asK  164 (261)
T 2wyu_A           88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV---PKYNVMAIAK  164 (261)
T ss_dssp             EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC---TTCHHHHHHH
T ss_pred             CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCC---CCchHHHHHH
Confidence            999999986421                        1234445544    13589999997665322   2222589999


Q ss_pred             hhHHHHHH-------hcCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          126 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       126 ~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      ...+.+.+       .+++++++++||.|+++.... .........+....++         ..+.+++|+|++++.++.
T Consensus       165 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva~~v~~l~s  235 (261)
T 2wyu_A          165 AALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL---------RRNITQEEVGNLGLFLLS  235 (261)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcC
Confidence            98887764       248999999999999974321 1112222323222221         135679999999999997


Q ss_pred             CCc--cCCceEEecCCccccHHH
Q 021331          198 NEK--ASRQVFNISGEKYVTFDG  218 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~~~s~~e  218 (314)
                      ...  ..|+++++.++..++..|
T Consensus       236 ~~~~~~tG~~~~vdgG~~~~~~~  258 (261)
T 2wyu_A          236 PLASGITGEVVYVDAGYHIMGME  258 (261)
T ss_dssp             GGGTTCCSCEEEESTTGGGBC--
T ss_pred             hhhcCCCCCEEEECCCccccCCC
Confidence            532  258899999997665443

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.70  E-value=3.7e-17  Score=135.54  Aligned_cols=190  Identities=13%  Similarity=0.176  Sum_probs=131.3

Q ss_pred             CCcccccHHHHHHHHHH-CCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC---CccEE
Q 021331            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~---~~d~v   76 (314)
                      |||+|+||.++++.|++ .|+.|++++|+.+..               ...+.++.+|++|++++.++++..   ++|++
T Consensus        10 TGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~---------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~l   74 (244)
T 4e4y_A           10 TGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS---------------AENLKFIKADLTKQQDITNVLDIIKNVSFDGI   74 (244)
T ss_dssp             ETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC---------------CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEE
T ss_pred             eCCCChHHHHHHHHHHhcCCcEEEEeccccccc---------------cccceEEecCcCCHHHHHHHHHHHHhCCCCEE
Confidence            79999999999999999 689999998876531               146789999999999998888543   79999


Q ss_pred             EEcCCCCc--------------------ccHHHHHHhCC----CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHH
Q 021331           77 YDINGREA--------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVL  132 (314)
Q Consensus        77 i~~a~~~~--------------------~~~~~~~~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~  132 (314)
                      ||+||...                    .++..+++++.    ...++|++||...+...   |....|+.+|...+.+.
T Consensus        75 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---~~~~~Y~asKaa~~~~~  151 (244)
T 4e4y_A           75 FLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAK---PNSFAYTLSKGAIAQMT  151 (244)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCC---TTBHHHHHHHHHHHHHH
T ss_pred             EECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCC---CCCchhHHHHHHHHHHH
Confidence            99999732                    12334555543    22589999997765332   22236999999888776


Q ss_pred             H-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHc--CC----CeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          133 E-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GR----PIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       133 ~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      +       .+++++.+++||.|.++.     ..........  +.    .............+.+++|+|++++.++..+
T Consensus       152 ~~la~e~~~~gi~v~~v~PG~v~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~  226 (244)
T 4e4y_A          152 KSLALDLAKYQIRVNTVCPGTVDTDL-----YRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDK  226 (244)
T ss_dssp             HHHHHHHGGGTCEEEEEEESCBCCHH-----HHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHcCeEEEEEecCccCchh-----hHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCc
Confidence            4       468999999999998762     2221111000  00    0000001111235778999999999999864


Q ss_pred             c--cCCceEEecCCcc
Q 021331          200 K--ASRQVFNISGEKY  213 (314)
Q Consensus       200 ~--~~~~~~~i~~~~~  213 (314)
                      .  ..|+++++.+|..
T Consensus       227 ~~~itG~~i~vdGG~~  242 (244)
T 4e4y_A          227 SKFMTGGLIPIDGGYT  242 (244)
T ss_dssp             GTTCCSCEEEESTTGG
T ss_pred             cccccCCeEeECCCcc
Confidence            3  3689999999864

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.70  E-value=5.1e-17  Score=136.45  Aligned_cols=195  Identities=18%  Similarity=0.233  Sum_probs=131.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhh-hhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+ .....++.++.+|++|++++.++++..     ++|
T Consensus        27 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD  101 (267)
T 1vl8_A           27 TGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAA-----QKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLD  101 (267)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999865422110     011 111346888999999999888877643     699


Q ss_pred             EEEEcCCCCcc--------------------cH----HHHHHhCC--CCCcEEEEeece-eeccCCCCCccCccccchhh
Q 021331           75 VVYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAG-VYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        75 ~vi~~a~~~~~--------------------~~----~~~~~~~~--~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~k~~  127 (314)
                      ++||+||....                    ++    +.++..+.  +..++|++||.. .+..   .+....|..+|..
T Consensus       102 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---~~~~~~Y~asK~a  178 (267)
T 1vl8_A          102 TVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVT---MPNISAYAASKGG  178 (267)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCC---SSSCHHHHHHHHH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccC---CCCChhHHHHHHH
Confidence            99999986321                    12    22333343  567999999976 3211   1222268999998


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCchh--HHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE--EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      .+.+.+       .+++++++++||.+.++.... ..  ...........+  .       ..+.+.+|+|++++.++..
T Consensus       179 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~p--~-------~~~~~p~dvA~~v~~l~s~  248 (267)
T 1vl8_A          179 VASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEA-VFSDPEKLDYMLKRIP--L-------GRTGVPEDLKGVAVFLASE  248 (267)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHH-HHTCHHHHHHHHHTCT--T-------SSCBCGGGGHHHHHHHHSG
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEeccCccccccc-cccChHHHHHHHhhCC--C-------CCCcCHHHHHHHHHHHcCc
Confidence            887764       258999999999998873211 10  111122222111  1       2377899999999999976


Q ss_pred             Cc--cCCceEEecCCcc
Q 021331          199 EK--ASRQVFNISGEKY  213 (314)
Q Consensus       199 ~~--~~~~~~~i~~~~~  213 (314)
                      ..  ..|+++.+.+|..
T Consensus       249 ~~~~itG~~i~vdGG~~  265 (267)
T 1vl8_A          249 EAKYVTGQIIFVDGGWT  265 (267)
T ss_dssp             GGTTCCSCEEEESTTGG
T ss_pred             cccCCcCCeEEECCCCC
Confidence            32  3688999998854

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.70  E-value=2.6e-17  Score=138.83  Aligned_cols=198  Identities=14%  Similarity=0.086  Sum_probs=132.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......        .+...++.++.+|++|++++.++++..     ++|+
T Consensus        35 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           35 TGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAA--------TKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             TTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999865532111        111357889999999999888877643     7999


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||....                    ++.++.++    +.  +..++|++||...+...   +....|+.+|...+
T Consensus       107 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~---~~~~~Y~asKaa~~  183 (277)
T 3gvc_A          107 LVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAV---GGTGAYGMSKAGII  183 (277)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC---TTBHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC---CCchhHHHHHHHHH
Confidence            9999997321                    12223333    32  55689999997654322   22236999999888


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCC---CCceeeeeeHHHHHHHHHHHhcCC
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGS---GIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      .+.+       .+|+++.+++||.|++|.     ........ ..........   ......+.+++|+|++++.++...
T Consensus       184 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~  257 (277)
T 3gvc_A          184 QLSRITAAELRSSGIRSNTLLPAFVDTPM-----QQTAMAMF-DGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDD  257 (277)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHH-----HHHHHTCC-------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHhcccCeEEEEEeeCCccCch-----HHHhhhcc-hhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCc
Confidence            7764       368999999999998862     11110000 0000000000   011134778999999999999764


Q ss_pred             c--cCCceEEecCCcccc
Q 021331          200 K--ASRQVFNISGEKYVT  215 (314)
Q Consensus       200 ~--~~~~~~~i~~~~~~s  215 (314)
                      .  ..|+++++.||...+
T Consensus       258 a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          258 ASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             GTTCCSCEEEESTTGGGS
T ss_pred             cCCccCcEEEECCcchhc
Confidence            3  368999999987554

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.70  E-value=5e-17  Score=136.34  Aligned_cols=178  Identities=17%  Similarity=0.157  Sum_probs=124.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......           ..++.++.+|++|++++.++++..     ++|+
T Consensus        22 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   90 (266)
T 3p19_A           22 TGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN-----------LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADA   90 (266)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC-----------CTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh-----------cCCceEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence            799999999999999999999999999876543222           147889999999999888887643     7999


Q ss_pred             EEEcCCCCc--------------------ccHHH----HHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~----~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||...                    .++.+    ++..+.  +..++|++||...+...   +....|+.+|...+
T Consensus        91 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~---~~~~~Y~asK~a~~  167 (266)
T 3p19_A           91 IVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTF---PDHAAYCGTKFAVH  167 (266)
T ss_dssp             EEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC---TTCHHHHHHHHHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCC---CCCchHHHHHHHHH
Confidence            999999732                    11222    333343  66799999997765332   22236899998887


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.+       .+|+++..++||.|.++................. ..++       ..+++++|+|++++.+++++.
T Consensus       168 ~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~~-------~r~~~pedvA~av~~l~~~~~  237 (266)
T 3p19_A          168 AISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAW-RVDM-------GGVLAADDVARAVLFAYQQPQ  237 (266)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHH-HHHT-------TCCBCHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhh-cccc-------cCCCCHHHHHHHHHHHHcCCC
Confidence            7653       3689999999999988742211111111111100 0011       247789999999999998765

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.70  E-value=3.7e-17  Score=136.68  Aligned_cols=201  Identities=16%  Similarity=0.173  Sum_probs=131.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcc--cccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP--IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.  .....     ..+.....++.++.+|++|++++.++++..     ++
T Consensus         8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (258)
T 3a28_C            8 TGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETI-----KLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGF   82 (258)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999998654  21110     111112356889999999999888877642     69


Q ss_pred             cEEEEcCCCCcc--------------------c----HHHHHHhCC--CC-CcEEEEeeceeeccCCCCCccCccccchh
Q 021331           74 DVVYDINGREAD--------------------E----VEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCESRHKGKL  126 (314)
Q Consensus        74 d~vi~~a~~~~~--------------------~----~~~~~~~~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~  126 (314)
                      |++||+||....                    +    ++.++..+.  +. .++|++||...+...   +....|..+|.
T Consensus        83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~~sK~  159 (258)
T 3a28_C           83 DVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF---PILSAYSTTKF  159 (258)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCC---TTCHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCC---CCchhHHHHHH
Confidence            999999986321                    1    122333332  44 799999997665322   22226899998


Q ss_pred             hHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHH---cC--CC-eecCCCCCceeeeeeHHHHHHHHH
Q 021331          127 NTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK---AG--RP-IPIPGSGIQVTQLGHVKDLARAFV  193 (314)
Q Consensus       127 ~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~---~~--~~-~~~~~~~~~~~~~i~~~D~a~~~~  193 (314)
                      ..+.+.+       ..++++++++||.+.++     +.........   ..  .. ............+.+++|+|++++
T Consensus       160 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~  234 (258)
T 3a28_C          160 AVRGLTQAAAQELAPKGHTVNAYAPGIVGTG-----MWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVS  234 (258)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBCSH-----HHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEECCccCCh-----hhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHH
Confidence            8877664       35899999999998765     2111110000   00  00 000000011124788999999999


Q ss_pred             HHhcCCc--cCCceEEecCCccc
Q 021331          194 QVLGNEK--ASRQVFNISGEKYV  214 (314)
Q Consensus       194 ~~l~~~~--~~~~~~~i~~~~~~  214 (314)
                      .++..+.  ..|.++++.+|..+
T Consensus       235 ~l~s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          235 FLASENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             HHHSGGGTTCCSCEEEESSSSCC
T ss_pred             HHhCcccCCCCCCEEEECCCEec
Confidence            9997642  36889999988654

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.70  E-value=1.3e-17  Score=140.34  Aligned_cols=198  Identities=15%  Similarity=0.183  Sum_probs=135.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     .++.....++.++.+|++|++++.++++..     ++|+
T Consensus        32 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (271)
T 4ibo_A           32 TGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTV-----QEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDI  106 (271)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-----HHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            899999999999999999999999999865532111     122223457889999999999988888643     6999


Q ss_pred             EEEcCCCCc--------------------ccHHHH----HHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEVEPI----LDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~----~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||...                    .++.++    +..+.  +..++|++||...+...   +....|+.+|...+
T Consensus       107 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~---~~~~~Y~asKaa~~  183 (271)
T 4ibo_A          107 LVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELAR---ATVAPYTVAKGGIK  183 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC---TTCHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCC---CCchhHHHHHHHHH
Confidence            999999632                    112223    33333  55699999996654322   12226899998887


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      .+.+       .+|+++..++||.+.++...... .......+....++         ..+.+++|+|++++.++.... 
T Consensus       184 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva~~v~~L~s~~~~  254 (271)
T 4ibo_A          184 MLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPA---------KRWGKPQELVGTAVFLSASASD  254 (271)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTT---------CSCBCGGGGHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCcccc
Confidence            7764       36899999999999887321100 01122222222221         246678999999999987633 


Q ss_pred             -cCCceEEecCCcccc
Q 021331          201 -ASRQVFNISGEKYVT  215 (314)
Q Consensus       201 -~~~~~~~i~~~~~~s  215 (314)
                       ..|+++++.+|..++
T Consensus       255 ~itG~~i~vdGG~~~~  270 (271)
T 4ibo_A          255 YVNGQIIYVDGGMLSV  270 (271)
T ss_dssp             TCCSCEEEESTTGGGB
T ss_pred             CCCCcEEEECCCeecc
Confidence             368999999987554

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.70  E-value=1.1e-16  Score=135.11  Aligned_cols=194  Identities=14%  Similarity=0.158  Sum_probs=131.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEc-CCcccccCCCCCCchhhhhc-cCceEEEEecCCCh----hhHHHhhhcC---
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDY----DFVKSSLSAK---   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~----~~l~~~~~~~---   71 (314)
                      |||+|+||.++++.|+++|++|++++| +.+......     ..+... ..++.++.+|++|+    +++.++++..   
T Consensus        17 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   91 (276)
T 1mxh_A           17 TGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLV-----AELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   91 (276)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH-----HHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHh
Confidence            899999999999999999999999999 544321110     111111 24688999999999    8888777643   


Q ss_pred             --CccEEEEcCCCCc--------------------cc-----------HHHHHHh----CC-CC------CcEEEEeece
Q 021331           72 --GFDVVYDINGREA--------------------DE-----------VEPILDA----LP-NL------EQFIYCSSAG  107 (314)
Q Consensus        72 --~~d~vi~~a~~~~--------------------~~-----------~~~~~~~----~~-~~------~~~i~~Ss~~  107 (314)
                        ++|++||+||...                    ..           +.+++++    +. +.      .++|++||..
T Consensus        92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  171 (276)
T 1mxh_A           92 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  171 (276)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             cCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchh
Confidence              6999999998531                    11           1122222    32 33      6899999977


Q ss_pred             eeccCCCCCccCccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCcee
Q 021331          108 VYLKSDLLPHCESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVT  180 (314)
Q Consensus       108 v~~~~~~~~~~e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (314)
                      .+...   +....|+.+|...+.+.+       .+|+++++++||.++++ .  .+............  ++ +     +
T Consensus       172 ~~~~~---~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~--~~~~~~~~~~~~~~--p~-~-----r  237 (276)
T 1mxh_A          172 TDLPL---PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P--AMPQETQEEYRRKV--PL-G-----Q  237 (276)
T ss_dssp             GGSCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S--SSCHHHHHHHHTTC--TT-T-----S
T ss_pred             hcCCC---CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c--cCCHHHHHHHHhcC--CC-C-----C
Confidence            66432   222268999988877763       24899999999999998 2  12222223332221  11 1     1


Q ss_pred             eeeeHHHHHHHHHHHhcCCc--cCCceEEecCCcc
Q 021331          181 QLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKY  213 (314)
Q Consensus       181 ~~i~~~D~a~~~~~~l~~~~--~~~~~~~i~~~~~  213 (314)
                      .+.+++|+|++++.++..+.  ..|+++++.++..
T Consensus       238 ~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~  272 (276)
T 1mxh_A          238 SEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI  272 (276)
T ss_dssp             CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCHHHHHHHHHHHhCccccCccCcEEEECCchh
Confidence            27889999999999997533  2688999998864

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.70  E-value=4.6e-17  Score=135.99  Aligned_cols=192  Identities=17%  Similarity=0.200  Sum_probs=131.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC----CccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~----~~d~v   76 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.....+           ..++.++.+|++|++++.++++..    ++|++
T Consensus        15 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~l   83 (257)
T 3tl3_A           15 TGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL-----------GDRARFAAADVTDEAAVASALDLAETMGTLRIV   83 (257)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHT-----------CTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhc-----------CCceEEEECCCCCHHHHHHHHHHHHHhCCCCEE
Confidence            799999999999999999999999999655432222           367899999999999888877543    79999


Q ss_pred             EEcCCCCc------------------------ccHHHHHHh----CC----------CCCcEEEEeeceeeccCCCCCcc
Q 021331           77 YDINGREA------------------------DEVEPILDA----LP----------NLEQFIYCSSAGVYLKSDLLPHC  118 (314)
Q Consensus        77 i~~a~~~~------------------------~~~~~~~~~----~~----------~~~~~i~~Ss~~v~~~~~~~~~~  118 (314)
                      ||+||...                        .++..++++    +.          +..++|++||...+...   +..
T Consensus        84 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~  160 (257)
T 3tl3_A           84 VNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ---IGQ  160 (257)
T ss_dssp             EECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH---HHH
T ss_pred             EECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC---CCC
Confidence            99998531                        111222222    22          23479999997665321   112


Q ss_pred             CccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHH
Q 021331          119 ESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  191 (314)
Q Consensus       119 e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  191 (314)
                      ..|+.+|...+.+.+       .+++++..++||.|..+.... .............+.  .      ..+.+.+|+|++
T Consensus       161 ~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~--~------~r~~~p~dva~~  231 (257)
T 3tl3_A          161 AAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS-LPEEARASLGKQVPH--P------SRLGNPDEYGAL  231 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC----CHHHHHHHHHTSSS--S------CSCBCHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhh-ccHHHHHHHHhcCCC--C------CCccCHHHHHHH
Confidence            268999987777653       358999999999998874321 222222222222211  0      247789999999


Q ss_pred             HHHHhcCCccCCceEEecCCcccc
Q 021331          192 FVQVLGNEKASRQVFNISGEKYVT  215 (314)
Q Consensus       192 ~~~~l~~~~~~~~~~~i~~~~~~s  215 (314)
                      ++.+++++...|+++++.||..++
T Consensus       232 v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          232 AVHIIENPMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHHHHCTTCCSCEEEESTTC---
T ss_pred             HHHHhcCCCCCCCEEEECCCccCC
Confidence            999998866689999999987654

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.70  E-value=2.9e-17  Score=138.83  Aligned_cols=196  Identities=15%  Similarity=0.176  Sum_probs=133.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        30 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~  104 (279)
T 3sju_A           30 TGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAV-----DGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGI  104 (279)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            799999999999999999999999999875432111     112222357899999999999888877643     6899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHh------CC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           76 VYDINGREA--------------------DEVEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~------~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      +||+||...                    .++.++.++      +.  +..++|++||...+...   +....|+.+|..
T Consensus       105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~---~~~~~Y~asKaa  181 (279)
T 3sju_A          105 LVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGV---MYAAPYTASKHG  181 (279)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCC---TTCHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCC---CCChhHHHHHHH
Confidence            999999632                    112223332      22  45799999997665322   222269999987


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCc----------hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHH
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNP----------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  190 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  190 (314)
                      .+.+.+       .+++++..++||.|.++.....          .............         ....+.+++|+|+
T Consensus       182 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~pedvA~  252 (279)
T 3sju_A          182 VVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKI---------PLGRYSTPEEVAG  252 (279)
T ss_dssp             HHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTC---------TTSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcC---------CCCCCCCHHHHHH
Confidence            777653       3689999999999887621000          0111112222111         1234678999999


Q ss_pred             HHHHHhcCCc--cCCceEEecCCcc
Q 021331          191 AFVQVLGNEK--ASRQVFNISGEKY  213 (314)
Q Consensus       191 ~~~~~l~~~~--~~~~~~~i~~~~~  213 (314)
                      +++.++....  ..|+++++.||..
T Consensus       253 ~v~~L~s~~a~~itG~~i~vdGG~~  277 (279)
T 3sju_A          253 LVGYLVTDAAASITAQALNVCGGLG  277 (279)
T ss_dssp             HHHHHTSSGGGGCCSCEEEESTTCC
T ss_pred             HHHHHhCccccCcCCcEEEECCCcc
Confidence            9999998643  3789999998853

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.70  E-value=4.8e-17  Score=136.59  Aligned_cols=195  Identities=13%  Similarity=0.126  Sum_probs=129.1

Q ss_pred             CCccc-ccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTR-FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+| .||.++++.|+++|++|++++|+.+......     ..+.+. ..++.++.+|++|+++++++++..     ++
T Consensus        28 TGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  102 (266)
T 3o38_A           28 TAAAGTGIGSTTARRALLEGADVVISDYHERRLGETR-----DQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRL  102 (266)
T ss_dssp             SSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHH-----HHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCC
Confidence            79998 6999999999999999999999876532111     011111 257999999999999998888643     68


Q ss_pred             cEEEEcCCCCc--------------------ccHHHHHHh----CC---CCCcEEEEeeceeeccCCCCCccCccccchh
Q 021331           74 DVVYDINGREA--------------------DEVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCESRHKGKL  126 (314)
Q Consensus        74 d~vi~~a~~~~--------------------~~~~~~~~~----~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~  126 (314)
                      |++||+||...                    .++.+++++    +.   +..++|++||...+....   ....|+.+|.
T Consensus       103 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---~~~~Y~~sKa  179 (266)
T 3o38_A          103 DVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQH---SQSHYAAAKA  179 (266)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCT---TCHHHHHHHH
T ss_pred             cEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCC---CCchHHHHHH
Confidence            99999999632                    112233333    22   345799999976653222   2226999998


Q ss_pred             hHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          127 NTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       127 ~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      ..+.+.+       ..++++..++||.+.++..............         ........+.+.+|+|++++.++...
T Consensus       180 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~---------~~~~~~~r~~~~~dva~~i~~l~s~~  250 (266)
T 3o38_A          180 GVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRL---------ASDEAFGRAAEPWEVAATIAFLASDY  250 (266)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCCCC--------------------------CCTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHH---------HhcCCcCCCCCHHHHHHHHHHHcCcc
Confidence            8887764       3689999999999987732211111111111         11222345788999999999999863


Q ss_pred             c--cCCceEEecCCc
Q 021331          200 K--ASRQVFNISGEK  212 (314)
Q Consensus       200 ~--~~~~~~~i~~~~  212 (314)
                      .  ..|+++++.+|.
T Consensus       251 ~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          251 SSYMTGEVVSVSSQR  265 (266)
T ss_dssp             GTTCCSCEEEESSCC
T ss_pred             ccCccCCEEEEcCCc
Confidence            2  368999999874

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.69  E-value=6.9e-17  Score=135.58  Aligned_cols=197  Identities=15%  Similarity=0.159  Sum_probs=133.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh-ccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.+ ...++.++.+|++|+++++++++..     ++|
T Consensus        26 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  100 (266)
T 4egf_A           26 TGATKGIGADIARAFAAAGARLVLSGRDVSELDAAR-----RALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLD  100 (266)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCS
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            899999999999999999999999999865532111     11111 2357899999999999888877643     799


Q ss_pred             EEEEcCCCCc--------------------ccHHHHHHh----CC--C-CCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           75 VVYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~~~~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      ++||+||...                    .++..+.++    +.  + ..++|++||...+....   ....|..+|..
T Consensus       101 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~asK~a  177 (266)
T 4egf_A          101 VLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLP---DHYAYCTSKAG  177 (266)
T ss_dssp             EEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT---TCHHHHHHHHH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCC---CChHHHHHHHH
Confidence            9999998632                    112223333    32  2 46899999977653322   22268999988


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      .+.+.+       .+++++..++||.|.++...... ............+         ...+.+++|+|++++.++...
T Consensus       178 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~dva~~v~~L~s~~  248 (266)
T 4egf_A          178 LVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIP---------LGRFAVPHEVSDAVVWLASDA  248 (266)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCT---------TSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCch
Confidence            877653       35899999999999876210000 0111122222211         124677999999999999863


Q ss_pred             c--cCCceEEecCCccc
Q 021331          200 K--ASRQVFNISGEKYV  214 (314)
Q Consensus       200 ~--~~~~~~~i~~~~~~  214 (314)
                      .  ..|+++++.+|..+
T Consensus       249 ~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          249 ASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             hcCccCcEEEECCCccC
Confidence            2  36899999998754

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.69  E-value=3.1e-17  Score=135.92  Aligned_cols=187  Identities=14%  Similarity=0.112  Sum_probs=131.0

Q ss_pred             CCcccccHHHHHHHHHHCCC-------eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC--
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~--   71 (314)
                      |||+|+||.++++.|+++|+       +|++++|+.+......     ..+.....++.++.+|++|++++.++++..  
T Consensus         8 TGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (244)
T 2bd0_A            8 TGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKIS-----LECRAEGALTDTITADISDMADVRRLTTHIVE   82 (244)
T ss_dssp             ETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHH-----HHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHH-----HHHHccCCeeeEEEecCCCHHHHHHHHHHHHH
Confidence            79999999999999999999       9999999865422110     011111356889999999999888887632  


Q ss_pred             ---CccEEEEcCCCCc--------------------ccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccc
Q 021331           72 ---GFDVVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRH  122 (314)
Q Consensus        72 ---~~d~vi~~a~~~~--------------------~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (314)
                         ++|+|||+||...                    .++.++++++    .  +..+||++||...+....   ....|+
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---~~~~Y~  159 (244)
T 2bd0_A           83 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFR---HSSIYC  159 (244)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---TCHHHH
T ss_pred             hCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCC---CCchhH
Confidence               6999999998632                    1233344443    2  567999999987764322   223689


Q ss_pred             cchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHH
Q 021331          123 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  195 (314)
Q Consensus       123 ~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  195 (314)
                      .+|...+.+.+       ..+++++++||+.++++......           .      ..  ...+++++|+|++++.+
T Consensus       160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----------~------~~--~~~~~~~~dva~~~~~l  220 (244)
T 2bd0_A          160 MSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD-----------D------EM--QALMMMPEDIAAPVVQA  220 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC-----------S------TT--GGGSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcc-----------c------cc--cccCCCHHHHHHHHHHH
Confidence            99998887753       35799999999999998432100           0      00  12578999999999999


Q ss_pred             hcCCcc--CCceEEecCCccc
Q 021331          196 LGNEKA--SRQVFNISGEKYV  214 (314)
Q Consensus       196 l~~~~~--~~~~~~i~~~~~~  214 (314)
                      +..+..  .++++...+++.+
T Consensus       221 ~~~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          221 YLQPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             HTSCTTEEEEEEEEEETTCCC
T ss_pred             HhCCccccchheEEecccccc
Confidence            986432  4566666666544

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.69  E-value=1.1e-16  Score=134.47  Aligned_cols=194  Identities=15%  Similarity=0.147  Sum_probs=132.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.+++++|+++|++|+++.++........    ...+.....++.++.+|++|++++.++++..     ++|+
T Consensus        32 TGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~----~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~  107 (267)
T 4iiu_A           32 TGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQET----LNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYG  107 (267)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHH----HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            899999999999999999999988765543211100    0122222467899999999999988887643     7999


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhC------C-CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA--------------------DEVEPILDAL------P-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~------~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||...                    .++.++++.+      . +..++|++||...+....   ....|+.+|...
T Consensus       108 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~asKaa~  184 (267)
T 4iiu_A          108 VVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNR---GQVNYSAAKAGI  184 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCT---TCHHHHHHHHHH
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCC---CCchhHHHHHHH
Confidence            999998632                    1233344443      2 567999999966553322   122689999866


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      +.+.+       ..++++.+++||.+.++.....  ...........+.         ..+.+++|+|++++.++.... 
T Consensus       185 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~p~---------~~~~~~edva~~~~~L~s~~~~  253 (267)
T 4iiu_A          185 IGATKALAIELAKRKITVNCIAPGLIDTGMIEME--ESALKEAMSMIPM---------KRMGQAEEVAGLASYLMSDIAG  253 (267)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC--HHHHHHHHHTCTT---------CSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc--HHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCCccc
Confidence            65542       3589999999999998854322  2233333332221         246789999999999997632 


Q ss_pred             -cCCceEEecCCc
Q 021331          201 -ASRQVFNISGEK  212 (314)
Q Consensus       201 -~~~~~~~i~~~~  212 (314)
                       ..|+++++.+|.
T Consensus       254 ~itG~~i~vdGG~  266 (267)
T 4iiu_A          254 YVTRQVISINGGM  266 (267)
T ss_dssp             TCCSCEEEESTTC
T ss_pred             CccCCEEEeCCCc
Confidence             368899998874

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.69  E-value=5.5e-17  Score=136.84  Aligned_cols=196  Identities=17%  Similarity=0.161  Sum_probs=134.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     .++.....++.++.+|++|++++++++++.     ++|+
T Consensus        38 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~  112 (276)
T 3r1i_A           38 TGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVA-----DEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDI  112 (276)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-----HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999866532111     122333457889999999999998888643     7999


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHh----CC--C-CCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||....                    ++..++++    +.  + ..++|++||...+..... +....|+.+|...
T Consensus       113 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~-~~~~~Y~asKaa~  191 (276)
T 3r1i_A          113 AVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP-QQVSHYCTSKAAV  191 (276)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS-SCCHHHHHHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC-CCcchHHHHHHHH
Confidence            9999997321                    12223333    22  2 368999999765432111 1112589999888


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      +.+.+       ..++++..++||.|..+.... . ...........+         ...+.+.+|+|++++.++.... 
T Consensus       192 ~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~-~-~~~~~~~~~~~p---------~~r~~~pedvA~~v~fL~s~~~~  260 (276)
T 3r1i_A          192 VHLTKAMAVELAPHQIRVNSVSPGYIRTELVEP-L-ADYHALWEPKIP---------LGRMGRPEELTGLYLYLASAASS  260 (276)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGG-G-GGGHHHHGGGST---------TSSCBCGGGSHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc-c-hHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCcccc
Confidence            87764       368999999999998874321 1 111122221111         1246789999999999998633 


Q ss_pred             -cCCceEEecCCcc
Q 021331          201 -ASRQVFNISGEKY  213 (314)
Q Consensus       201 -~~~~~~~i~~~~~  213 (314)
                       ..|+++++.||..
T Consensus       261 ~itG~~i~vdGG~~  274 (276)
T 3r1i_A          261 YMTGSDIVIDGGYT  274 (276)
T ss_dssp             TCCSCEEEESTTTT
T ss_pred             CccCcEEEECcCcc
Confidence             3689999998864

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.69  E-value=3.6e-17  Score=137.58  Aligned_cols=199  Identities=14%  Similarity=0.161  Sum_probs=132.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++++.........    ..+.....++.++.+|++|+++++++++..     ++|+
T Consensus        31 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~  106 (269)
T 3gk3_A           31 TGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWL----MHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDV  106 (269)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHH----HHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999865433111000    011112357899999999999888887643     7999


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||....                    ++.++++.    +.  +..++|++||...+....   ....|+.+|...+
T Consensus       107 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~asKaa~~  183 (269)
T 3gk3_A          107 LINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAF---GQANYASAKAGIH  183 (269)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT---TBHHHHHHHHHHH
T ss_pred             EEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCC---CcchHHHHHHHHH
Confidence            9999986321                    12233333    32  557999999976653322   2226899998777


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       ..++++..++||.+..+.... ...    .......    ........+.+++|+|++++.++..+.  
T Consensus       184 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~----~~~~~~~----~~~~~~~~~~~p~dvA~~v~~L~s~~~~~  254 (269)
T 3gk3_A          184 GFTKTLALETAKRGITVNTVSPGYLATAMVEA-VPQ----DVLEAKI----LPQIPVGRLGRPDEVAALIAFLCSDDAGF  254 (269)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC------------CCS----GGGCTTSSCBCHHHHHHHHHHHTSTTCTT
T ss_pred             HHHHHHHHHhhhcCCEEEEEecCcccchhhhh-hch----hHHHHHh----hhcCCcCCccCHHHHHHHHHHHhCCCcCC
Confidence            6653       358999999999998874321 111    1111011    111122356789999999999998643  


Q ss_pred             cCCceEEecCCcccc
Q 021331          201 ASRQVFNISGEKYVT  215 (314)
Q Consensus       201 ~~~~~~~i~~~~~~s  215 (314)
                      ..|+++++.+|..+|
T Consensus       255 itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          255 VTGADLAINGGMHMS  269 (269)
T ss_dssp             CCSCEEEESTTSCCC
T ss_pred             eeCcEEEECCCEeCc
Confidence            368999999987654

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.69  E-value=1.9e-17  Score=138.34  Aligned_cols=190  Identities=15%  Similarity=0.086  Sum_probs=123.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC--CccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~--~~d~vi~   78 (314)
                      |||+|+||.++++.|+++|++|++++|+.+....                 . +.+|++|+++++++++..  ++|++||
T Consensus         7 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-----------------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~   68 (257)
T 1fjh_A            7 SGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-----------------D-LSTAEGRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-----------------C-TTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-----------------c-cccCCCCHHHHHHHHHHhCCCCCEEEE
Confidence            7999999999999999999999999998765221                 1 468999999999988754  5799999


Q ss_pred             cCCCCc-------------ccHHHHHHh----CC--CCCcEEEEeeceeeccC-------------------------CC
Q 021331           79 INGREA-------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKS-------------------------DL  114 (314)
Q Consensus        79 ~a~~~~-------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~-------------------------~~  114 (314)
                      +||...             .++.+++++    +.  +..++|++||...+...                         ..
T Consensus        69 ~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (257)
T 1fjh_A           69 CAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGE  148 (257)
T ss_dssp             CCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCT
T ss_pred             CCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccC
Confidence            999754             123333333    32  45799999998876210                         11


Q ss_pred             CCccCccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHH
Q 021331          115 LPHCESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  187 (314)
Q Consensus       115 ~~~~e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  187 (314)
                      .+....|+.+|...+.+.+       ..++++++++||.+.++.................  +.     .....+.+++|
T Consensus       149 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~d  221 (257)
T 1fjh_A          149 QGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAK--FV-----PPMGRRAEPSE  221 (257)
T ss_dssp             THHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------CC-----CSTTSCCCTHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHh--cc-----cccCCCCCHHH
Confidence            1112268999998887764       3589999999999988742211000000000000  00     11124788999


Q ss_pred             HHHHHHHHhcCC--ccCCceEEecCCcccc
Q 021331          188 LARAFVQVLGNE--KASRQVFNISGEKYVT  215 (314)
Q Consensus       188 ~a~~~~~~l~~~--~~~~~~~~i~~~~~~s  215 (314)
                      +|++++.++..+  ...|+.+++.++..++
T Consensus       222 vA~~~~~l~~~~~~~~tG~~~~vdgG~~~~  251 (257)
T 1fjh_A          222 MASVIAFLMSPAASYVHGAQIVIDGGIDAV  251 (257)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHHHHHHHhCchhcCCcCCEEEECCCcccc
Confidence            999999999764  2368899999886544

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.69  E-value=6.6e-17  Score=136.39  Aligned_cols=196  Identities=15%  Similarity=0.184  Sum_probs=131.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+... .++.++.+|++|+++++++++..     ++|+
T Consensus        35 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  108 (276)
T 2b4q_A           35 TGGSRGIGQMIAQGLLEAGARVFICARDAEACADTA-----TRLSAY-GDCQAIPADLSSEAGARRLAQALGELSARLDI  108 (276)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----HHHTTS-SCEEECCCCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhc-CceEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865422111     011111 26888899999999888877642     6999


Q ss_pred             EEEcCCCCcc--------------------cH----HHHHHhCC--CC----CcEEEEeeceeeccCCCCCccC-ccccc
Q 021331           76 VYDINGREAD--------------------EV----EPILDALP--NL----EQFIYCSSAGVYLKSDLLPHCE-SRHKG  124 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~~~~~~~--~~----~~~i~~Ss~~v~~~~~~~~~~e-~~~~~  124 (314)
                      +||+||....                    ++    +.++..+.  +.    .++|++||...+....   ... .|+.+
T Consensus       109 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~---~~~~~Y~as  185 (276)
T 2b4q_A          109 LVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMG---EQAYAYGPS  185 (276)
T ss_dssp             EEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCC---CSCTTHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCC---CCccccHHH
Confidence            9999985321                    12    23333332  33    7999999977654322   222 59999


Q ss_pred             hhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          125 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       125 k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      |...+.+.+       ..++++++++||.+.++.... ...............+       ...+.+++|+|++++.++.
T Consensus       186 K~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~p-------~~r~~~p~dvA~~v~~l~s  257 (276)
T 2b4q_A          186 KAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH-IANDPQALEADSASIP-------MGRWGRPEEMAALAISLAG  257 (276)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH-HHHCHHHHHHHHHTST-------TSSCCCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh-cchhHHHHHHhhcCCC-------CCCcCCHHHHHHHHHHHhC
Confidence            998887764       358999999999998873211 1110111111100111       1247789999999999997


Q ss_pred             CCc--cCCceEEecCCcc
Q 021331          198 NEK--ASRQVFNISGEKY  213 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~~  213 (314)
                      .+.  ..|+++++.+|..
T Consensus       258 ~~~~~~tG~~i~vdGG~~  275 (276)
T 2b4q_A          258 TAGAYMTGNVIPIDGGFH  275 (276)
T ss_dssp             GGGTTCCSCEEEESTTTT
T ss_pred             ccccCCCCCEEEeCCCcc
Confidence            642  3688999988753

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.69  E-value=2e-17  Score=140.88  Aligned_cols=199  Identities=23%  Similarity=0.275  Sum_probs=133.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCccc-ccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+.... ...+    ...+.....++.++.+|++|+++++++++..     ++|
T Consensus        55 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  130 (294)
T 3r3s_A           55 TGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQV----KALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLD  130 (294)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH----HHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHH----HHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            79999999999999999999999998874321 1000    0112222457889999999999888877542     799


Q ss_pred             EEEEcCCCCc---------------------ccHHHHHHh----CCCCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           75 VVYDINGREA---------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        75 ~vi~~a~~~~---------------------~~~~~~~~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      ++||+||...                     .++.+++++    +.+..++|++||...+....   ....|+.+|...+
T Consensus       131 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~---~~~~Y~asKaa~~  207 (294)
T 3r3s_A          131 ILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSP---HLLDYAATKAAIL  207 (294)
T ss_dssp             EEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCT---TCHHHHHHHHHHH
T ss_pred             EEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCC---CchHHHHHHHHHH
Confidence            9999998632                     112233443    33345899999987765322   2226999999887


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       ..|+++..++||.|+++.....        ..................+.+.+|+|++++.++....  
T Consensus       208 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~  279 (294)
T 3r3s_A          208 NYSRGLAKQVAEKGIRVNIVAPGPIWTALQISG--------GQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSY  279 (294)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTT--------TSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHhhcCeEEEEEecCcCcccccccc--------CCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            7753       3589999999999988620000        0000001111222233457789999999999997643  


Q ss_pred             cCCceEEecCCccc
Q 021331          201 ASRQVFNISGEKYV  214 (314)
Q Consensus       201 ~~~~~~~i~~~~~~  214 (314)
                      ..|+++++.||..+
T Consensus       280 itG~~i~vdGG~~l  293 (294)
T 3r3s_A          280 VTAEVHGVCGGEHL  293 (294)
T ss_dssp             CCSCEEEESTTCCC
T ss_pred             CCCCEEEECCCccC
Confidence            36899999998755

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.69  E-value=2.3e-17  Score=138.62  Aligned_cols=202  Identities=14%  Similarity=0.118  Sum_probs=135.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCChhhHHHhhhcC-CccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-GFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi   77 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......     .+...  ...+.++.+|++|++++.+++++. ++|++|
T Consensus        16 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv   90 (267)
T 3t4x_A           16 TGSTAGIGKAIATSLVAEGANVLINGRREENVNETIK-----EIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDILI   90 (267)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----HHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSEEE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence            8999999999999999999999999998754321110     11111  245788899999999999888766 699999


Q ss_pred             EcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           78 DINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        78 ~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      |+||....                    +    ++.++..+.  +..++|++||...+...   +....|+.+|...+.+
T Consensus        91 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asKaa~~~l  167 (267)
T 3t4x_A           91 NNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPS---QEMAHYSATKTMQLSL  167 (267)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCC---TTCHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCC---CcchHHHHHHHHHHHH
Confidence            99996321                    1    233444443  45699999997765332   2223699999888877


Q ss_pred             HH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCee----------cCCCCCceeeeeeHHHHHHHHHH
Q 021331          132 LE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP----------IPGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       132 ~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                      .+       .+++++..++||.+.++     ....+...........          -.........+.+++|+|++++.
T Consensus       168 ~~~la~e~~~~gi~vn~v~PG~v~t~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~f  242 (267)
T 3t4x_A          168 SRSLAELTTGTNVTVNTIMPGSTLTE-----GVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVTF  242 (267)
T ss_dssp             HHHHHHHTTTSEEEEEEEEECCBCCH-----HHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHHHHH
T ss_pred             HHHHHHHhCCCCeEEEEEeCCeecCc-----cHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHHHHH
Confidence            64       24689999999988775     1211111110000000          00001112458889999999999


Q ss_pred             HhcCCc--cCCceEEecCCcccc
Q 021331          195 VLGNEK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       195 ~l~~~~--~~~~~~~i~~~~~~s  215 (314)
                      ++....  ..|+++++.||...+
T Consensus       243 L~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          243 LSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HcCccccCccCCeEEECCCcccc
Confidence            998532  368999999997654

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.69  E-value=4.3e-17  Score=137.94  Aligned_cols=201  Identities=15%  Similarity=0.147  Sum_probs=132.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccC---ceEEEEecCCChhhHHHhhhcC-----C
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS---KILHLKGDRKDYDFVKSSLSAK-----G   72 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~d~~~l~~~~~~~-----~   72 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....   ++.++.+|++|+++++++++..     +
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (280)
T 1xkq_A           12 TGSSNGIGRTTAILFAQEGANVTITGRSSERLEETR-----QIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGK   86 (280)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            899999999999999999999999999875432110     01111112   6889999999999888877642     6


Q ss_pred             ccEEEEcCCCCcc------------------------cHHHHHHh----CC-CCCcEEEEeeceeeccCCCCCccCcccc
Q 021331           73 FDVVYDINGREAD------------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCESRHK  123 (314)
Q Consensus        73 ~d~vi~~a~~~~~------------------------~~~~~~~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (314)
                      +|++||+||....                        ++.+++++    +. ...++|++||...+...  .+....|+.
T Consensus        87 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--~~~~~~Y~a  164 (280)
T 1xkq_A           87 IDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA--QPDFLYYAI  164 (280)
T ss_dssp             CCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC--CCSSHHHHH
T ss_pred             CCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCC--CCcccHHHH
Confidence            9999999985311                        12223333    22 12799999997765432  022236999


Q ss_pred             chhhHHHHHH-------hcCCceEEEecCeeeCCCCCCch-hHH----HHHHHHcCCCeecCCCCCceeeeeeHHHHHHH
Q 021331          124 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEW----FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  191 (314)
Q Consensus       124 ~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  191 (314)
                      +|...+.+.+       .+++++++++||.+.++...... ...    .........      .......+.+++|+|++
T Consensus       165 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~p~~~~~~pedvA~~  238 (280)
T 1xkq_A          165 AKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHK------ECIPIGAAGKPEHIANI  238 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCT------TTCTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHH------cCCCCCCCCCHHHHHHH
Confidence            9998887764       35899999999999987311000 000    000111100      00111347899999999


Q ss_pred             HHHHhcCC---ccCCceEEecCCccc
Q 021331          192 FVQVLGNE---KASRQVFNISGEKYV  214 (314)
Q Consensus       192 ~~~~l~~~---~~~~~~~~i~~~~~~  214 (314)
                      ++.++..+   ...|+++++.++..+
T Consensus       239 v~~l~s~~~~~~~tG~~i~vdgG~~~  264 (280)
T 1xkq_A          239 ILFLADRNLSFYILGQSIVADGGTSL  264 (280)
T ss_dssp             HHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHhcCcccccCccCCeEEECCCccc
Confidence            99998754   236889999998643

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.69  E-value=1.7e-16  Score=132.90  Aligned_cols=192  Identities=18%  Similarity=0.251  Sum_probs=132.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......        +...++.++.+|++|++++.++++..     ++|+
T Consensus        12 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   83 (263)
T 2a4k_A           12 TGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA--------ALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   83 (263)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------TCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            7999999999999999999999999998654321110        01146889999999999988887643     5899


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHh----CCCCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           76 VYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      +||+||....                    ++.++.++    ++...++|++||...++.    +....|..+|...+.+
T Consensus        84 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~Y~asK~a~~~~  159 (263)
T 2a4k_A           84 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA----FGLAHYAAGKLGVVGL  159 (263)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH----HHHHHHHHCSSHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCC----CCcHHHHHHHHHHHHH
Confidence            9999986321                    12223333    322469999999876621    2222688889877666


Q ss_pred             HH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cC
Q 021331          132 LE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--AS  202 (314)
Q Consensus       132 ~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~  202 (314)
                      .+       ..|+++++++||.+.++.... .............++         ..+.+.+|+|++++.++..+.  ..
T Consensus       160 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~~~~~p~dvA~~v~~l~s~~~~~~t  229 (263)
T 2a4k_A          160 ARTLALELARKGVRVNVLLPGLIQTPMTAG-LPPWAWEQEVGASPL---------GRAGRPEEVAQAALFLLSEESAYIT  229 (263)
T ss_dssp             HHHHHHHHTTTTCEEEEEEECSBCCGGGTT-SCHHHHHHHHHTSTT---------CSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHhhhhCcEEEEEEeCcCcCchhhh-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCccccCCc
Confidence            53       358999999999999874221 112222222222211         236789999999999997642  36


Q ss_pred             CceEEecCCccc
Q 021331          203 RQVFNISGEKYV  214 (314)
Q Consensus       203 ~~~~~i~~~~~~  214 (314)
                      |+.+++.++..+
T Consensus       230 G~~i~vdgG~~~  241 (263)
T 2a4k_A          230 GQALYVDGGRSI  241 (263)
T ss_dssp             SCEEEESTTTTT
T ss_pred             CCEEEECCCccc
Confidence            889999998654

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.69  E-value=7.5e-18  Score=145.42  Aligned_cols=214  Identities=15%  Similarity=0.095  Sum_probs=141.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCC--CC---CCchhhhhccCceEEEEecCCChhhHHHhhhcC----
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL--PG---ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~----   71 (314)
                      |||+|+||.++++.|+++|++|++++|+........  ..   .....+.....++.++.+|++|++++.++++..    
T Consensus        33 TGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  112 (322)
T 3qlj_A           33 TGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETF  112 (322)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            899999999999999999999999998721100000  00   000122223457889999999999988887643    


Q ss_pred             -CccEEEEcCCCCcc--------------------cHHHHHHhC----C----C----CCcEEEEeeceeeccCCCCCcc
Q 021331           72 -GFDVVYDINGREAD--------------------EVEPILDAL----P----N----LEQFIYCSSAGVYLKSDLLPHC  118 (314)
Q Consensus        72 -~~d~vi~~a~~~~~--------------------~~~~~~~~~----~----~----~~~~i~~Ss~~v~~~~~~~~~~  118 (314)
                       ++|++||+||....                    ++.++++++    .    .    ..+||++||...+....   ..
T Consensus       113 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~---~~  189 (322)
T 3qlj_A          113 GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSV---GQ  189 (322)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCBT---TC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCCC---CC
Confidence             79999999997321                    122233332    1    0    25899999976653322   12


Q ss_pred             CccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHH
Q 021331          119 ESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  191 (314)
Q Consensus       119 e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  191 (314)
                      ..|+.+|...+.+.+       ..|+++..|+|| +..+...... ....            ........+++++|+|++
T Consensus       190 ~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~-~~~~------------~~~~~~~~~~~pedva~~  255 (322)
T 3qlj_A          190 GNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVF-AEMM------------ATQDQDFDAMAPENVSPL  255 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSC-CC--------------------CCTTCGGGTHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhh-hhhh------------hccccccCCCCHHHHHHH
Confidence            269999988887764       268999999999 6554321111 0000            001112345679999999


Q ss_pred             HHHHhcCCc--cCCceEEecCCccc-----------------cHHHHHHHHHHHhCCCC
Q 021331          192 FVQVLGNEK--ASRQVFNISGEKYV-----------------TFDGLARACAKAAGFPE  231 (314)
Q Consensus       192 ~~~~l~~~~--~~~~~~~i~~~~~~-----------------s~~el~~~i~~~~g~~~  231 (314)
                      ++.++....  ..|+++++.+|...                 +..|+++.+.+.+|.+.
T Consensus       256 v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~  314 (322)
T 3qlj_A          256 VVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKAR  314 (322)
T ss_dssp             HHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSC
T ss_pred             HHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccC
Confidence            999997643  36899999998755                 67999999999998543

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.69  E-value=1.1e-16  Score=135.33  Aligned_cols=196  Identities=14%  Similarity=0.103  Sum_probs=134.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     .+|+
T Consensus        40 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~  114 (279)
T 3ctm_A           40 TGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAE-----HLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTIDV  114 (279)
T ss_dssp             TTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHH-----HHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865422110     111112356889999999999998888632     4999


Q ss_pred             EEEcCCCCcc------c--------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           76 VYDINGREAD------E--------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~~~------~--------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      |||+||....      .                    ++.+++.+.  +.++||++||...+.... .+....|+.+|..
T Consensus       115 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-~~~~~~Y~~sK~a  193 (279)
T 3ctm_A          115 FVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNI-PQLQAPYNTAKAA  193 (279)
T ss_dssp             EEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC----CCHHHHHHHHHH
T ss_pred             EEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCC-CCCcccHHHHHHH
Confidence            9999985321      1                    345666665  678999999976543210 1222269999999


Q ss_pred             HHHHHHh-------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          128 TESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       128 ~e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.+.+.       .+ ++++++|+.+.++.... ........+....+         ...+++++|+|++++.++..+.
T Consensus       194 ~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~p---------~~~~~~~~dvA~~~~~l~s~~~  262 (279)
T 3ctm_A          194 CTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDF-ASKDMKAKWWQLTP---------LGREGLTQELVGGYLYLASNAS  262 (279)
T ss_dssp             HHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSS-CCHHHHHHHHHHST---------TCSCBCGGGTHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHhcccC-CEEEEeccCCccccccc-cChHHHHHHHHhCC---------ccCCcCHHHHHHHHHHHhCccc
Confidence            8887742       45 89999999998874321 11122222211111         1247889999999999997632


Q ss_pred             --cCCceEEecCCcc
Q 021331          201 --ASRQVFNISGEKY  213 (314)
Q Consensus       201 --~~~~~~~i~~~~~  213 (314)
                        ..|+++++.+|..
T Consensus       263 ~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          263 TFTTGSDVVIDGGYT  277 (279)
T ss_dssp             TTCCSCEEEESTTCC
T ss_pred             cCccCCEEEECCCee
Confidence              3688999998864

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.69  E-value=1.5e-16  Score=133.51  Aligned_cols=197  Identities=14%  Similarity=0.118  Sum_probs=132.4

Q ss_pred             CCcc--cccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+  |+||.++++.|+++|++|++++|+... ...+     ..+........++.+|++|++++.++++..     ++
T Consensus        15 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~-----~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   88 (265)
T 1qsg_A           15 TGVASKLSIAYGIAQAMHREGAELAFTYQNDKL-KGRV-----EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF   88 (265)
T ss_dssp             CCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTT-HHHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred             ECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHH-HHHH-----HHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            7999  999999999999999999999998621 1100     111111133578899999999888877643     68


Q ss_pred             cEEEEcCCCCcc-------------------------cHHHHHHhCC----CCCcEEEEeeceeeccCCCCCccCccccc
Q 021331           74 DVVYDINGREAD-------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCESRHKG  124 (314)
Q Consensus        74 d~vi~~a~~~~~-------------------------~~~~~~~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (314)
                      |++||+||....                         ++.++++++.    ...++|++||...+...   +....|+.+
T Consensus        89 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~~s  165 (265)
T 1qsg_A           89 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI---PNYNVMGLA  165 (265)
T ss_dssp             EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC---TTTTHHHHH
T ss_pred             CEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCC---CCchHHHHH
Confidence            999999986421                         1223344433    23589999997665332   222258999


Q ss_pred             hhhHHHHHH-------hcCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          125 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       125 k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      |...+.+.+       .+++++++++||.++++.... .........+....++         ..+.+++|+|++++.++
T Consensus       166 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva~~v~~l~  236 (265)
T 1qsg_A          166 KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI---------RRTVTIEDVGNSAAFLC  236 (265)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHh
Confidence            998888764       247999999999999985321 1122222333222221         13678999999999998


Q ss_pred             cCCc--cCCceEEecCCcccc
Q 021331          197 GNEK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       197 ~~~~--~~~~~~~i~~~~~~s  215 (314)
                      ....  ..|+++++.++..++
T Consensus       237 s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          237 SDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             SGGGTTCCSCEEEESTTGGGB
T ss_pred             CchhcCccCCEEEECCCcCCC
Confidence            7533  268899999987544

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.69  E-value=5.6e-17  Score=137.98  Aligned_cols=194  Identities=14%  Similarity=0.035  Sum_probs=130.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-CccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi~~   79 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......        +...++.++.+|++|++++.++++.. ++|++||+
T Consensus        22 TGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~n   93 (291)
T 3rd5_A           22 TGANSGLGAVTARELARRGATVIMAVRDTRKGEAAAR--------TMAGQVEVRELDLQDLSSVRRFADGVSGADVLINN   93 (291)
T ss_dssp             ECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT--------TSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEEC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------HhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            7999999999999999999999999998765332111        11257899999999999999999865 68999999


Q ss_pred             CCCCc------------------ccHHHHHHhCC--CCCcEEEEeeceeeccCCC--------CCc--cCccccchhhHH
Q 021331           80 NGREA------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDL--------LPH--CESRHKGKLNTE  129 (314)
Q Consensus        80 a~~~~------------------~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~--------~~~--~e~~~~~k~~~e  129 (314)
                      ||...                  .++.++++++.  ..+|+|++||...+.....        .+.  ...|+.+|...+
T Consensus        94 Ag~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~  173 (291)
T 3rd5_A           94 AGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANL  173 (291)
T ss_dssp             CCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHH
T ss_pred             CcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHHHHH
Confidence            99631                  22445555554  3358999999776643211        011  116999998887


Q ss_pred             HHHH-------hcC--CceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          130 SVLE-------SKG--VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       130 ~~~~-------~~~--~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.+       ..+  +++..++||.|..+.... ........+.     ..    ...+-..+.+|+|++++.++..+.
T Consensus       174 ~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~-~~~~~~~~~~-----~~----~~~~~~~~~~~~A~~~~~l~~~~~  243 (291)
T 3rd5_A          174 LFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGA-SGRKLGDALM-----SA----ATRVVATDADFGARQTLYAASQDL  243 (291)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEECCSGGGSCC------------------------------CHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHhhCCCCEEEEEeeCCCCccccccc-cchHHHHHHH-----HH----HHHHHhCCHHHHHHHHHHHHcCCC
Confidence            7653       235  899999999998763211 1001101000     00    011223458999999999998866


Q ss_pred             cCCceEEecCCc
Q 021331          201 ASRQVFNISGEK  212 (314)
Q Consensus       201 ~~~~~~~i~~~~  212 (314)
                      ..|+.+.+.+|.
T Consensus       244 ~~G~~~~vdgG~  255 (291)
T 3rd5_A          244 PGDSFVGPRFGY  255 (291)
T ss_dssp             CTTCEEEETTSS
T ss_pred             CCCceeCCcccc
Confidence            678888887653

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.69  E-value=3.6e-17  Score=137.75  Aligned_cols=197  Identities=15%  Similarity=0.150  Sum_probs=133.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc----CCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~----~~~d~v   76 (314)
                      |||+|+||.++++.|+++|++|++++|+.... ...     ..+.....++.++.+|++|++++.++.+.    -++|++
T Consensus        37 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~l  110 (273)
T 3uf0_A           37 TGAGSGIGRAIAHGYARAGAHVLAWGRTDGVK-EVA-----DEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDVL  110 (273)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTHHH-HHH-----HHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHH-HHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcEE
Confidence            79999999999999999999999999764321 100     11222235789999999999888777442    279999


Q ss_pred             EEcCCCCc--------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           77 YDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        77 i~~a~~~~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      ||+||...                    .++.+++++    +.  +..++|++||...+....   ....|+.+|...+.
T Consensus       111 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~---~~~~Y~asKaa~~~  187 (273)
T 3uf0_A          111 VNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGR---NVAAYAASKHAVVG  187 (273)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCS---SCHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCC---CChhHHHHHHHHHH
Confidence            99998732                    122233333    32  567899999977653322   22269999988877


Q ss_pred             HHH-------hcCCceEEEecCeeeCCCCCCc-hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          131 VLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       131 ~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      +.+       ..|+++..++||.|.++..... ........+....+         ...+.+++|+|++++.++....  
T Consensus       188 l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedva~~v~~L~s~~a~~  258 (273)
T 3uf0_A          188 LTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIP---------AGRWATPEDMVGPAVFLASDAASY  258 (273)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHST---------TSSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCchhcC
Confidence            763       3689999999999998732100 01111222222111         1246789999999999998632  


Q ss_pred             cCCceEEecCCcccc
Q 021331          201 ASRQVFNISGEKYVT  215 (314)
Q Consensus       201 ~~~~~~~i~~~~~~s  215 (314)
                      ..|+++++.+|..+|
T Consensus       259 itG~~i~vdGG~~~s  273 (273)
T 3uf0_A          259 VHGQVLAVDGGWLAS  273 (273)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             CcCCEEEECcCccCC
Confidence            378999999987543

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.68  E-value=7.3e-17  Score=136.58  Aligned_cols=203  Identities=15%  Similarity=0.153  Sum_probs=134.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  108 (283)
T 3v8b_A           34 TGAGSGIGRATALALAADGVTVGALGRTRTEVEEVA-----DEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDI  108 (283)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999875532111     112222357889999999999888888653     7999


Q ss_pred             EEEcCCCCc---------------------ccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA---------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~---------------------~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||...                     .++..+++++    .  +..++|++||...+.... .|....|+.+|...
T Consensus       109 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~-~~~~~~Y~asKaa~  187 (283)
T 3v8b_A          109 VVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFT-TPGATAYTATKAAQ  187 (283)
T ss_dssp             EEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC-STTCHHHHHHHHHH
T ss_pred             EEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCC-CCCchHHHHHHHHH
Confidence            999999631                     1122333333    3  567999999976543111 12223699999988


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCce--eeeeeHHHHHHHHHHHhcCC
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQV--TQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~D~a~~~~~~l~~~  199 (314)
                      +.+.+       ..++++..++||.+..+.........  . .....+..........  ..+.+.+|+|++++.++...
T Consensus       188 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~-~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~  264 (283)
T 3v8b_A          188 VAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRH--E-EETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSER  264 (283)
T ss_dssp             HHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCC--H-HHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHhCccCcEEEEEEeCCCcCCccccccccc--c-hhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCcc
Confidence            87764       25799999999999887432211000  0 0001111111111111  34678999999999999763


Q ss_pred             c--cCCceEEecCCc
Q 021331          200 K--ASRQVFNISGEK  212 (314)
Q Consensus       200 ~--~~~~~~~i~~~~  212 (314)
                      .  ..|+++++.||.
T Consensus       265 a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          265 ARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             GTTCCSCEEEESTTH
T ss_pred             ccCCcCCEEEECcCc
Confidence            3  368899999885

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.68  E-value=1.1e-16  Score=135.12  Aligned_cols=209  Identities=12%  Similarity=0.090  Sum_probs=134.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCC-C-------chhhhhccCceEEEEecCCChhhHHHhhhcC-
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE-S-------DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-   71 (314)
                      |||+|+||.++++.|+++|++|++++|+........... .       ...+.....++.++.+|++|++++.++++.. 
T Consensus        17 TGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   96 (277)
T 3tsc_A           17 TGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGV   96 (277)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            799999999999999999999999998533111000000 0       0112223467899999999999988887642 


Q ss_pred             ----CccEEEEcCCCCcc--------------------cHHHHHHh----CC--C-CCcEEEEeeceeeccCCCCCccCc
Q 021331           72 ----GFDVVYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCES  120 (314)
Q Consensus        72 ----~~d~vi~~a~~~~~--------------------~~~~~~~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~  120 (314)
                          ++|++||+||....                    ++.+++++    +.  + ..++|++||...+...   |....
T Consensus        97 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~  173 (277)
T 3tsc_A           97 AALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQ---PFMIH  173 (277)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---SSCHH
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCC---CCchh
Confidence                69999999987321                    12223333    32  2 4689999997765332   22236


Q ss_pred             cccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCe-ecCCCCCceeeeeeHHHHHHHH
Q 021331          121 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-PIPGSGIQVTQLGHVKDLARAF  192 (314)
Q Consensus       121 ~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~D~a~~~  192 (314)
                      |+.+|...+.+.+       .+++++..++||.+.++.................... ......... .+.+.+|+|+++
T Consensus       174 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-r~~~pedvA~~v  252 (277)
T 3tsc_A          174 YTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD-WVAEPEDIADTV  252 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSC-SCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCC-CCCCHHHHHHHH
Confidence            9999988877764       3589999999999988742221111111111111111 111111112 478999999999


Q ss_pred             HHHhcCCc--cCCceEEecCCcc
Q 021331          193 VQVLGNEK--ASRQVFNISGEKY  213 (314)
Q Consensus       193 ~~~l~~~~--~~~~~~~i~~~~~  213 (314)
                      +.++....  ..|+++++.+|..
T Consensus       253 ~~L~s~~~~~itG~~i~vdGG~~  275 (277)
T 3tsc_A          253 CWLASDESRKVTAAQIPVDQGST  275 (277)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHhCccccCCcCCEEeeCCCcc
Confidence            99997643  3689999998863

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.68  E-value=1.5e-16  Score=130.93  Aligned_cols=167  Identities=17%  Similarity=0.096  Sum_probs=113.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.....         .....++.++.+|++|++++.++++..     ++|+
T Consensus        11 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (234)
T 2ehd_A           11 TGASRGIGEATARLLHAKGYRVGLMARDEKRLQAL---------AAELEGALPLPGDVREEGDWARAVAAMEEAFGELSA   81 (234)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---------HHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542211         111136888999999999888877643     6899


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |||+||....                    +    ++.++..+.  +.++||++||...+...   +....|+.+|...+
T Consensus        82 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---~~~~~Y~~sK~a~~  158 (234)
T 2ehd_A           82 LVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPF---KGGAAYNASKFGLL  158 (234)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCC---TTCHHHHHHHHHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCC---CCCchhhHHHHHHH
Confidence            9999986321                    1    234455544  56799999998765432   22226899998777


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.+       ..+++++++|||.+..+...     .    . . ..          ..+++.+|+|++++.++..+.
T Consensus       159 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----~----~-~-~~----------~~~~~~~dvA~~~~~l~~~~~  215 (234)
T 2ehd_A          159 GLAGAAMLDLREANVRVVNVLPGSVDTGFAG-----N----T-P-GQ----------AWKLKPEDVAQAVLFALEMPG  215 (234)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEECC-------------------------------------CCHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHhhcCcEEEEEEeCCCcCCccc-----c----c-c-cc----------cCCCCHHHHHHHHHHHhCCCc
Confidence            6653       35899999999988765211     0    0 0 00          115789999999999998653

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.68  E-value=2.1e-17  Score=141.27  Aligned_cols=187  Identities=14%  Similarity=0.110  Sum_probs=121.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        37 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~  111 (301)
T 3tjr_A           37 TGGASGIGLATATEFARRGARLVLSDVDQPALEQAV-----NGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDV  111 (301)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCE
Confidence            799999999999999999999999999876532111     122222357899999999999988887643     7999


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHh----CC--C-CCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||...                    .++.+++++    +.  + ..++|++||...+...   +....|+.+|...
T Consensus       112 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asKaa~  188 (301)
T 3tjr_A          112 VFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPN---AGLGTYGVAKYGV  188 (301)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC---TTBHHHHHHHHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC---CCchHHHHHHHHH
Confidence            999999632                    123334443    22  3 5689999997665322   2223699999887


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHH-----HHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR-----LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      +.+.+       ..|+++++++||.|..+     +.......     .....+....+.......+++++|+|++++.++
T Consensus       189 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l  263 (301)
T 3tjr_A          189 VGLAETLAREVKPNGIGVSVLCPMVVETK-----LVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAI  263 (301)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEECCSCCCSS-----HHHHHHHHC----------------------CCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcccCcEEEEEECCccccc-----cccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHH
Confidence            77653       35799999999998776     22211110     000111111122233456899999999999999


Q ss_pred             cCCc
Q 021331          197 GNEK  200 (314)
Q Consensus       197 ~~~~  200 (314)
                      ..+.
T Consensus       264 ~~~~  267 (301)
T 3tjr_A          264 LANR  267 (301)
T ss_dssp             HHTC
T ss_pred             hcCC
Confidence            8653

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.68  E-value=1.1e-16  Score=134.67  Aligned_cols=198  Identities=17%  Similarity=0.169  Sum_probs=131.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.....         .+...++.++.+|++|+++++++++..     ++|+
T Consensus        15 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   85 (270)
T 1yde_A           15 TGGGRGIGAGIVRAFVNSGARVVICDKDESGGRAL---------EQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   85 (270)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542211         111135788999999999988887643     6899


Q ss_pred             EEEcCCCCcc---------------------cHHHHHHh----CC-CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD---------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~---------------------~~~~~~~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||....                     ++.+++++    +. +..++|++||...+...   +....|..+|...+
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asKaa~~  162 (270)
T 1yde_A           86 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ---AQAVPYVATKGAVT  162 (270)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC---TTCHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCC---CCCcccHHHHHHHH
Confidence            9999986321                     12223333    22 35799999996543221   11226899998888


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCC-----chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      .+.+       .+++++++++||.++++....     .-............+         ...+.+.+|+|++++.++.
T Consensus       163 ~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~dva~~v~~L~s  233 (270)
T 1yde_A          163 AMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP---------LGRMGQPAEVGAAAVFLAS  233 (270)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTST---------TSSCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCC---------CCCCcCHHHHHHHHHHHcc
Confidence            7764       368999999999999872100     000000011111111         1236789999999999887


Q ss_pred             CC-ccCCceEEecCCccccHHHH
Q 021331          198 NE-KASRQVFNISGEKYVTFDGL  219 (314)
Q Consensus       198 ~~-~~~~~~~~i~~~~~~s~~el  219 (314)
                      .. ...|+.+.+.||..+.+...
T Consensus       234 ~~~~itG~~i~vdGG~~~~~~~~  256 (270)
T 1yde_A          234 EANFCTGIELLVTGGAELGYGCK  256 (270)
T ss_dssp             HCTTCCSCEEEESTTTTSCC---
T ss_pred             cCCCcCCCEEEECCCeecccCcC
Confidence            53 23688999999977664433

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.68  E-value=2.7e-16  Score=130.86  Aligned_cols=177  Identities=11%  Similarity=0.111  Sum_probs=127.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.....                 ...+.+|++|++++.++++..     ++|+
T Consensus        28 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-----------------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~   90 (251)
T 3orf_A           28 LGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-----------------DHSFTIKDSGEEEIKSVIEKINSKSIKVDT   90 (251)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-----------------SEEEECSCSSHHHHHHHHHHHHTTTCCEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----------------ccceEEEeCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999876521                 235678999999888887643     6899


Q ss_pred             EEEcCCCCc---------------------ccHHHHHHhC----CCCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           76 VYDINGREA---------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        76 vi~~a~~~~---------------------~~~~~~~~~~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      +||+||...                     .++.++++++    ....++|++||...+...   +....|+.+|...+.
T Consensus        91 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~~sKaa~~~  167 (251)
T 3orf_A           91 FVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRT---SGMIAYGATKAATHH  167 (251)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC---TTBHHHHHHHHHHHH
T ss_pred             EEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCC---CCCchhHHHHHHHHH
Confidence            999998521                     1122333333    233589999997765322   222369999998888


Q ss_pred             HHH---------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC---
Q 021331          131 VLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN---  198 (314)
Q Consensus       131 ~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~---  198 (314)
                      +.+         ..++++.+++||.|.++     +    .......         .....+++++|+|++++.++..   
T Consensus       168 ~~~~la~e~~~~~~gi~v~~v~PG~v~t~-----~----~~~~~~~---------~~~~~~~~~~dva~~i~~l~~~~~~  229 (251)
T 3orf_A          168 IIKDLASENGGLPAGSTSLGILPVTLDTP-----T----NRKYMSD---------ANFDDWTPLSEVAEKLFEWSTNSDS  229 (251)
T ss_dssp             HHHHHTSTTSSSCTTCEEEEEEESCBCCH-----H----HHHHCTT---------SCGGGSBCHHHHHHHHHHHHHCGGG
T ss_pred             HHHHHHHHhcccCCCcEEEEEecCcCcCc-----c----hhhhccc---------ccccccCCHHHHHHHHHHHhcCccc
Confidence            763         25789999999988765     1    1111111         1224578899999999999987   


Q ss_pred             CccCCceEEecCCcccc
Q 021331          199 EKASRQVFNISGEKYVT  215 (314)
Q Consensus       199 ~~~~~~~~~i~~~~~~s  215 (314)
                      ....|+++++.+++..+
T Consensus       230 ~~~tG~~i~v~~g~~~~  246 (251)
T 3orf_A          230 RPTNGSLVKFETKSKVT  246 (251)
T ss_dssp             CCCTTCEEEEEEETTEE
T ss_pred             cCCcceEEEEecCCccc
Confidence            33478899998876543

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.68  E-value=7.8e-17  Score=134.16  Aligned_cols=185  Identities=15%  Similarity=0.197  Sum_probs=126.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+..                ..+.++.+|++|+++++++++..     ++|+
T Consensus        27 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~   90 (253)
T 2nm0_A           27 TGGNRGIGLAIARAFADAGDKVAITYRSGEPP----------------EGFLAVKCDITDTEQVEQAYKEIEETHGPVEV   90 (253)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------TTSEEEECCTTSHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh----------------ccceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999976542                23778999999999988887632     5799


Q ss_pred             EEEcCCCCcc--------------------cHHHHHH----hCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------EVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~----~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||....                    ++.++++    .+.  +..++|++||...+..   .+....|+.+|...+
T Consensus        91 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~---~~~~~~Y~asK~a~~  167 (253)
T 2nm0_A           91 LIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLG---SAGQANYAASKAGLV  167 (253)
T ss_dssp             EEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCC---HHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC---CCCcHHHHHHHHHHH
Confidence            9999986321                    1222333    332  5679999999765421   111226899998887


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       ..++++++++|+.+..+.... +............         ....+++.+|+|++++.++..+.  
T Consensus       168 ~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~---------p~~~~~~p~dvA~~i~~l~s~~~~~  237 (253)
T 2nm0_A          168 GFARSLARELGSRNITFNVVAPGFVDTDMTKV-LTDEQRANIVSQV---------PLGRYARPEEIAATVRFLASDDASY  237 (253)
T ss_dssp             HHHHHHHHHHCSSSEEEEEEEECSBCC----------CHHHHHTTC---------TTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh-cCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCccccC
Confidence            7764       257999999999987763211 1000111111111         11247889999999999997643  


Q ss_pred             cCCceEEecCCccc
Q 021331          201 ASRQVFNISGEKYV  214 (314)
Q Consensus       201 ~~~~~~~i~~~~~~  214 (314)
                      ..|..+.+.++..+
T Consensus       238 ~tG~~i~vdGG~~~  251 (253)
T 2nm0_A          238 ITGAVIPVDGGLGM  251 (253)
T ss_dssp             CCSCEEEESTTTTC
T ss_pred             CcCcEEEECCcccc
Confidence            36889999988654

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.68  E-value=3.4e-16  Score=131.69  Aligned_cols=197  Identities=15%  Similarity=0.145  Sum_probs=131.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++++.......+.    ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        24 TGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   99 (270)
T 3is3_A           24 TGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVV----SEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDI   99 (270)
T ss_dssp             SCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            8999999999999999999999998876543211110    122223467899999999999988888643     7899


Q ss_pred             EEEcCCCCcc--------------------cH----HHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           76 VYDINGREAD--------------------EV----EPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      +||+||....                    ++    +.++..+....++|++||....  ....|....|+.+|...+.+
T Consensus       100 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~--~~~~~~~~~Y~asKaa~~~~  177 (270)
T 3is3_A          100 AVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSK--DFSVPKHSLYSGSKGAVDSF  177 (270)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTT--TCCCTTCHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhc--cCCCCCCchhHHHHHHHHHH
Confidence            9999997321                    12    2233334445689999996521  11122223699999888877


Q ss_pred             HH-------hcCCceEEEecCeeeCCCCCC----------c-hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHH
Q 021331          132 LE-------SKGVNWTSLRPVYIYGPLNYN----------P-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  193 (314)
Q Consensus       132 ~~-------~~~~~~~ilR~~~v~g~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  193 (314)
                      .+       ..++++..++||.+.++....          . .............+         ...+.+++|+|++++
T Consensus       178 ~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~dvA~~v~  248 (270)
T 3is3_A          178 VRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASP---------LHRNGWPQDVANVVG  248 (270)
T ss_dssp             HHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHST---------TCSCBCHHHHHHHHH
T ss_pred             HHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCC---------CCCCCCHHHHHHHHH
Confidence            64       358999999999998873110          0 01111111111111         124677999999999


Q ss_pred             HHhcCCc--cCCceEEecCCc
Q 021331          194 QVLGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       194 ~~l~~~~--~~~~~~~i~~~~  212 (314)
                      .++....  ..|+++++.||.
T Consensus       249 ~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          249 FLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             HHTSGGGTTCCSCEEEESTTC
T ss_pred             HHcCCccCCccCcEEEeCCCC
Confidence            9997532  368899998874

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.68  E-value=7.4e-17  Score=134.87  Aligned_cols=200  Identities=16%  Similarity=0.135  Sum_probs=127.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++++........    ...+.....++.++.+|++|++++++++++.     ++|+
T Consensus        14 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   89 (259)
T 3edm_A           14 AGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATA----VAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHG   89 (259)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHH----HHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999855543311110    0122222467889999999999988887643     6999


Q ss_pred             EEEcCCCC-c--------------------ccHHHHHHhCC----CCCcEEEEeeceee-ccCCCCCccCccccchhhHH
Q 021331           76 VYDINGRE-A--------------------DEVEPILDALP----NLEQFIYCSSAGVY-LKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~-~--------------------~~~~~~~~~~~----~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||.. .                    .++.++.+++.    ...++|++||...+ ...   +....|+.+|...+
T Consensus        90 lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~~Y~asKaa~~  166 (259)
T 3edm_A           90 LVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGG---PGALAYATSKGAVM  166 (259)
T ss_dssp             EEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCS---TTCHHHHHHHHHHH
T ss_pred             EEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCC---CCcHHHHHHHHHHH
Confidence            99999853 1                    11233444433    33589999997765 221   12226899998888


Q ss_pred             HHHH----h--cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--c
Q 021331          130 SVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--A  201 (314)
Q Consensus       130 ~~~~----~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~  201 (314)
                      .+.+    +  ..+++..++||.+..+..............         ........+.+++|+|++++.++....  .
T Consensus       167 ~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~---------~~~~p~~r~~~pedva~~v~~L~s~~~~~i  237 (259)
T 3edm_A          167 TFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPEVRERV---------AGATSLKREGSSEDVAGLVAFLASDDAAYV  237 (259)
T ss_dssp             HHHHHHHHHHTTTCEEEEEEECCBCC-------------------------------CCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHCCCCEEEEEEECCCcCcccccccChHHHHHH---------HhcCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence            7764    2  238999999999887632111001111111         112223457789999999999997643  2


Q ss_pred             CCceEEecCCccccH
Q 021331          202 SRQVFNISGEKYVTF  216 (314)
Q Consensus       202 ~~~~~~i~~~~~~s~  216 (314)
                      .|+++++.|+...+.
T Consensus       238 tG~~i~vdGg~~~~~  252 (259)
T 3edm_A          238 TGACYDINGGVLFSE  252 (259)
T ss_dssp             CSCEEEESBCSSBC-
T ss_pred             cCCEEEECCCcCCCC
Confidence            689999999875543

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.68  E-value=1.4e-16  Score=133.61  Aligned_cols=196  Identities=20%  Similarity=0.212  Sum_probs=128.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++++.......+.    ..+.....++.++.+|++|+++++++++..     ++|+
T Consensus        33 TGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  108 (267)
T 3u5t_A           33 TGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVA----GKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDV  108 (267)
T ss_dssp             ESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999998665443211111    122223467889999999999988887643     7999


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHh----CCCCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           76 VYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      +||+||....                    ++.+++++    +....++|++||...+....   ....|+.+|...+.+
T Consensus       109 lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~asKaa~~~l  185 (267)
T 3u5t_A          109 LVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHP---SYGIYAAAKAGVEAM  185 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCT---TCHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCC---CchHHHHHHHHHHHH
Confidence            9999986321                    12223333    33345899999976654322   222699999988877


Q ss_pred             HH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cC
Q 021331          132 LE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--AS  202 (314)
Q Consensus       132 ~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~  202 (314)
                      .+       ..++++..++||.+..+.................         .....+.+++|+|++++.++....  ..
T Consensus       186 ~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~~~~~it  256 (267)
T 3u5t_A          186 THVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKL---------APLERLGTPQDIAGAVAFLAGPDGAWVN  256 (267)
T ss_dssp             HHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTS---------STTCSCBCHHHHHHHHHHHHSTTTTTCC
T ss_pred             HHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCccccCcc
Confidence            64       2479999999999887632111111111112211         112357789999999999997643  36


Q ss_pred             CceEEecCCc
Q 021331          203 RQVFNISGEK  212 (314)
Q Consensus       203 ~~~~~i~~~~  212 (314)
                      |+++++.||.
T Consensus       257 G~~i~vdGG~  266 (267)
T 3u5t_A          257 GQVLRANGGI  266 (267)
T ss_dssp             SEEEEESSSC
T ss_pred             CCEEEeCCCc
Confidence            8899998874

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.68  E-value=2.3e-16  Score=131.25  Aligned_cols=181  Identities=15%  Similarity=0.131  Sum_probs=114.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC----CccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~----~~d~v   76 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..    ++|++
T Consensus        13 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~l   87 (252)
T 3h7a_A           13 IGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLV-----AEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLEVT   87 (252)
T ss_dssp             ECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCceEE
Confidence            799999999999999999999999999876532111     122222457899999999999998888654    78999


Q ss_pred             EEcCCCCcc--------------------cH----HHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           77 YDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        77 i~~a~~~~~--------------------~~----~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      ||+||....                    ++    +.++..+.  +..++|++||...+...   +....|+.+|...+.
T Consensus        88 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asKaa~~~  164 (252)
T 3h7a_A           88 IFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGG---SGFAAFASAKFGLRA  164 (252)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCC---TTCHHHHHHHHHHHH
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCC---CCCccHHHHHHHHHH
Confidence            999996321                    12    22333333  55799999997654322   222368999988877


Q ss_pred             HHH-------hcCCce-EEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          131 VLE-------SKGVNW-TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       131 ~~~-------~~~~~~-~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      +.+       ..++++ .+++||.+..+..... ......         ......... +.+.+|+|++++.+++.+.
T Consensus       165 l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~-~~~~~~---------~~~~~~~~~-~~~pedvA~~~~~l~s~~~  231 (252)
T 3h7a_A          165 VAQSMARELMPKNIHVAHLIIDSGVDTAWVRER-REQMFG---------KDALANPDL-LMPPAAVAGAYWQLYQQPK  231 (252)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEEC--------------------------------------CCHHHHHHHHHHHHHCCG
T ss_pred             HHHHHHHHhhhcCCEEEEEecCCccCChhhhcc-chhhhh---------hhhhcCCcc-CCCHHHHHHHHHHHHhCch
Confidence            653       357888 8999998877632111 000000         001111223 8899999999999998654

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.68  E-value=1.3e-16  Score=131.85  Aligned_cols=188  Identities=17%  Similarity=0.225  Sum_probs=127.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc----C-CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K-GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~----~-~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+....        .     .++.++.+|++| +++.++++.    . ++|+
T Consensus         8 TGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~--------~-----~~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~   73 (239)
T 2ekp_A            8 TGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ--------S-----LGAVPLPTDLEK-DDPKGLVKRALEALGGLHV   73 (239)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHH--------H-----HTCEEEECCTTT-SCHHHHHHHHHHHHTSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH--------h-----hCcEEEecCCch-HHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998754110        1     137788999999 776665542    1 6999


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||....                    +    ++.++..+.  +..++|++||...+.... .+....|+.+|...+
T Consensus        74 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-~~~~~~Y~~sK~a~~  152 (239)
T 2ekp_A           74 LVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG-PVPIPAYTTAKTALL  152 (239)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-TSCCHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC-CCCCccHHHHHHHHH
Confidence            9999986321                    1    223333333  567999999987765331 122236999998887


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      .+.+       .++++++++||+.+.++...... .......+....+         ...+.+.+|+|++++.++..+. 
T Consensus       153 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~dvA~~~~~l~s~~~~  223 (239)
T 2ekp_A          153 GLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIP---------MGRWARPEEIARVAAVLCGDEAE  223 (239)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCT---------TSSCBCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCchhc
Confidence            7653       34899999999999887321000 0111222221111         1247789999999999987532 


Q ss_pred             -cCCceEEecCCc
Q 021331          201 -ASRQVFNISGEK  212 (314)
Q Consensus       201 -~~~~~~~i~~~~  212 (314)
                       ..|+.+++.++.
T Consensus       224 ~~tG~~~~vdgG~  236 (239)
T 2ekp_A          224 YLTGQAVAVDGGF  236 (239)
T ss_dssp             TCCSCEEEESTTT
T ss_pred             CCCCCEEEECCCc
Confidence             368899998875

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.68  E-value=3.6e-16  Score=129.83  Aligned_cols=178  Identities=15%  Similarity=0.088  Sum_probs=119.8

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-------
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-------   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-------   71 (314)
                      |||+|+||.++++.|+++|  ++|++++|+.+.... +..     +  ...++.++.+|++|++++.++++..       
T Consensus         9 tGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~-l~~-----~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            9 TGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-LKS-----I--KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             SSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH-HHT-----C--CCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             ecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHH-HHh-----c--cCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999  999999998665321 110     0  0357899999999999988888643       


Q ss_pred             CccEEEEcCCCCc---------------------ccHHHHHHhCC------------C-----CCcEEEEeeceeeccCC
Q 021331           72 GFDVVYDINGREA---------------------DEVEPILDALP------------N-----LEQFIYCSSAGVYLKSD  113 (314)
Q Consensus        72 ~~d~vi~~a~~~~---------------------~~~~~~~~~~~------------~-----~~~~i~~Ss~~v~~~~~  113 (314)
                      ++|+|||+||...                     .++.++++++.            +     ..+||++||...+....
T Consensus        81 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  160 (250)
T 1yo6_A           81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCc
Confidence            7999999998643                     11233333332            1     57899999976654321


Q ss_pred             CC----CccCccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeee
Q 021331          114 LL----PHCESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQL  182 (314)
Q Consensus       114 ~~----~~~e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (314)
                      ..    +....|+.+|...+.+.+       ..++++++++|+.+.++....                         ..+
T Consensus       161 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------------------~~~  215 (250)
T 1yo6_A          161 TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-------------------------NAA  215 (250)
T ss_dssp             CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------------------------
T ss_pred             ccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-------------------------CCC
Confidence            11    122269999998887763       248999999999887762100                         136


Q ss_pred             eeHHHHHHHHHHHhcCCc--cCCceEEecCC
Q 021331          183 GHVKDLARAFVQVLGNEK--ASRQVFNISGE  211 (314)
Q Consensus       183 i~~~D~a~~~~~~l~~~~--~~~~~~~i~~~  211 (314)
                      ++.+|+|++++.++..+.  ..|..+.+.++
T Consensus       216 ~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~  246 (250)
T 1yo6_A          216 LTVEQSTAELISSFNKLDNSHNGRFFMRNLK  246 (250)
T ss_dssp             ---HHHHHHHHHHHTTCCGGGTTCEEETTEE
T ss_pred             CCHHHHHHHHHHHHhcccccCCCeEEEECCc
Confidence            789999999999998754  25556655543

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.67  E-value=1.5e-16  Score=133.83  Aligned_cols=203  Identities=15%  Similarity=0.126  Sum_probs=135.7

Q ss_pred             CCcc--cccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+  |+||.++++.|+++|++|++++|+..... .+     ..+.....++.++.+|++|++++.++++..     ++
T Consensus        20 TGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   93 (271)
T 3ek2_A           20 TGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKD-RI-----TEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDSL   93 (271)
T ss_dssp             CCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSCE
T ss_pred             eCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHH-HH-----HHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            7988  99999999999999999999999843211 11     112122345889999999999998888643     68


Q ss_pred             cEEEEcCCCCcc-------------------------cHHHHHHhCC----CCCcEEEEeeceeeccCCCCCccCccccc
Q 021331           74 DVVYDINGREAD-------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCESRHKG  124 (314)
Q Consensus        74 d~vi~~a~~~~~-------------------------~~~~~~~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (314)
                      |++||+||....                         ++.++++++.    ...++|++||...+...   +....|+.+
T Consensus        94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~as  170 (271)
T 3ek2_A           94 DGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAI---PNYNTMGLA  170 (271)
T ss_dssp             EEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC---TTTTHHHHH
T ss_pred             CEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCC---CCccchhHH
Confidence            999999986421                         1223344332    34589999997665332   222368999


Q ss_pred             hhhHHHHHH-------hcCCceEEEecCeeeCCCCCCc-hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          125 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       125 k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      |...+.+.+       ..++++.+++||.|..+..... .............++         ..+.+++|+|++++.++
T Consensus       171 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~pedva~~i~~l~  241 (271)
T 3ek2_A          171 KAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPL---------KRNVTIEQVGNAGAFLL  241 (271)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCc---------CCCCCHHHHHHHHHHHc
Confidence            988877753       3589999999999988743221 112233333322221         23567899999999999


Q ss_pred             cCC--ccCCceEEecCCccccHHHHHH
Q 021331          197 GNE--KASRQVFNISGEKYVTFDGLAR  221 (314)
Q Consensus       197 ~~~--~~~~~~~~i~~~~~~s~~el~~  221 (314)
                      ...  ...|+++++.+|..++..++++
T Consensus       242 s~~~~~~tG~~i~vdgG~~~~~~~~~~  268 (271)
T 3ek2_A          242 SDLASGVTAEVMHVDSGFNAVVGGMAG  268 (271)
T ss_dssp             SGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred             CcccCCeeeeEEEECCCeeeehhhhhh
Confidence            863  2378999999998877666543

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.67  E-value=7.7e-17  Score=138.93  Aligned_cols=148  Identities=14%  Similarity=0.075  Sum_probs=102.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.....................++.++.+|++|++++.++++..     ++|+
T Consensus        11 TGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~   90 (324)
T 3u9l_A           11 TGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDV   90 (324)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            89999999999999999999999999874321100000000111122357899999999999988888654     7999


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||...                    .++.++++++    .  +..++|++||...+...  .+....|..+|...+
T Consensus        91 lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~--~~~~~~Y~asKaa~~  168 (324)
T 3u9l_A           91 LIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGT--PPYLAPYFAAKAAMD  168 (324)
T ss_dssp             EEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--CSSCHHHHHHHHHHH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCC--CCcchhHHHHHHHHH
Confidence            999999631                    2234444443    3  66799999997765321  122236999999888


Q ss_pred             HHHH-------hcCCceEEEecCeeeCC
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGP  150 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~  150 (314)
                      .+.+       ..|+++++|+||.|.++
T Consensus       169 ~~~~~la~el~~~gI~v~~v~PG~v~t~  196 (324)
T 3u9l_A          169 AIAVQYARELSRWGIETSIIVPGAFTSG  196 (324)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECCC---
T ss_pred             HHHHHHHHHhhhhCcEEEEEECCccccC
Confidence            7764       25899999999999865

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.67  E-value=7.9e-16  Score=130.35  Aligned_cols=197  Identities=16%  Similarity=0.115  Sum_probs=131.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.......+    ...+.....++.++.+|++|++++.++++..     ++|+
T Consensus        35 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~  110 (283)
T 1g0o_A           35 TGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEV----VAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI  110 (283)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHH----HHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999865311100    0112222357889999999999888777532     6899


Q ss_pred             EEEcCCCCcc--------------------cH----HHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           76 VYDINGREAD--------------------EV----EPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      +||+||....                    ++    +.++..+++..++|++||...+....  +....|+.+|...+.+
T Consensus       111 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--~~~~~Y~asK~a~~~~  188 (283)
T 1g0o_A          111 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV--PKHAVYSGSKGAIETF  188 (283)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC--SSCHHHHHHHHHHHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCC--CCCcchHHHHHHHHHH
Confidence            9999986321                    12    22333344557999999976543211  1122699999888877


Q ss_pred             HH-------hcCCceEEEecCeeeCCCCCCc----------hhHHHHHHHHc--CCCeecCCCCCceeeeeeHHHHHHHH
Q 021331          132 LE-------SKGVNWTSLRPVYIYGPLNYNP----------VEEWFFHRLKA--GRPIPIPGSGIQVTQLGHVKDLARAF  192 (314)
Q Consensus       132 ~~-------~~~~~~~ilR~~~v~g~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~D~a~~~  192 (314)
                      .+       .+++++++++||.+.++.....          ........+..  ..         ....+.+.+|+|+++
T Consensus       189 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~p~dvA~~v  259 (283)
T 1g0o_A          189 ARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS---------PLRRVGLPIDIARVV  259 (283)
T ss_dssp             HHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSC---------TTCSCBCHHHHHHHH
T ss_pred             HHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCC---------CCCCCcCHHHHHHHH
Confidence            64       3589999999999987621000          00111111111  11         112467899999999


Q ss_pred             HHHhcCCc--cCCceEEecCCc
Q 021331          193 VQVLGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       193 ~~~l~~~~--~~~~~~~i~~~~  212 (314)
                      +.++....  ..|+++++.+|.
T Consensus       260 ~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          260 CFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHhCccccCcCCCEEEeCCCc
Confidence            99997643  368899998875

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.67  E-value=2.2e-17  Score=139.43  Aligned_cols=199  Identities=13%  Similarity=0.164  Sum_probs=135.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhh-hccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......     .+. ....++.++.+|++|+++++++++..     ++|
T Consensus        33 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  107 (277)
T 4fc7_A           33 TGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAAR-----KLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRID  107 (277)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHH-----HHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999998654321110     111 11357899999999999888887643     799


Q ss_pred             EEEEcCCCCc--------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      ++||+||...                    .++.++.++    +.  +..++|++||...+....   ....|+.+|...
T Consensus       108 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~asKaa~  184 (277)
T 4fc7_A          108 ILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQA---LQVHAGSAKAAV  184 (277)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCT---TCHHHHHHHHHH
T ss_pred             EEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC---CcHHHHHHHHHH
Confidence            9999998531                    122333333    32  456899999976653322   122588899888


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCc--hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      +.+.+       .+|+++..++||.|.++.....  .............+         ...+.+.+|+|++++.+++..
T Consensus       185 ~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~dvA~~v~fL~s~~  255 (277)
T 4fc7_A          185 DAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASP---------LQRLGNKTEIAHSVLYLASPL  255 (277)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTST---------TSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCC---------CCCCcCHHHHHHHHHHHcCCc
Confidence            77653       3589999999999988621000  00111222222222         124678999999999999853


Q ss_pred             c--cCCceEEecCCccccH
Q 021331          200 K--ASRQVFNISGEKYVTF  216 (314)
Q Consensus       200 ~--~~~~~~~i~~~~~~s~  216 (314)
                      .  ..|+++++.||..+++
T Consensus       256 ~~~itG~~i~vdGG~~~~~  274 (277)
T 4fc7_A          256 ASYVTGAVLVADGGAWLTF  274 (277)
T ss_dssp             GTTCCSCEEEESTTHHHHC
T ss_pred             cCCcCCCEEEECCCcccCC
Confidence            2  3789999999876553

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.67  E-value=2.3e-16  Score=131.08  Aligned_cols=184  Identities=13%  Similarity=0.161  Sum_probs=125.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-CccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi~~   79 (314)
                      |||+|+||.++++.|+++|++|++++|+.+....            . ..+.++ +|+  .++++.+++.. ++|++||+
T Consensus        25 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------------~-~~~~~~-~D~--~~~~~~~~~~~~~iD~lv~~   88 (249)
T 1o5i_A           25 LAASRGIGRAVADVLSQEGAEVTICARNEELLKR------------S-GHRYVV-CDL--RKDLDLLFEKVKEVDILVLN   88 (249)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH------------T-CSEEEE-CCT--TTCHHHHHHHSCCCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHh------------h-CCeEEE-eeH--HHHHHHHHHHhcCCCEEEEC
Confidence            7999999999999999999999999998633110            1 246666 999  44555555544 79999999


Q ss_pred             CCCCccc------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHH
Q 021331           80 NGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLE  133 (314)
Q Consensus        80 a~~~~~~------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~  133 (314)
                      ||.....                        ++.++..+.  +..++|++||...+....   ....|+.+|...+.+.+
T Consensus        89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~~sK~a~~~~~~  165 (249)
T 1o5i_A           89 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIE---NLYTSNSARMALTGFLK  165 (249)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---TBHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCC---CCchHHHHHHHHHHHHH
Confidence            9863211                        234455554  567999999988765322   22368889988877653


Q ss_pred             -------hcCCceEEEecCeeeCCCCCCchhHHHHH-HHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cCC
Q 021331          134 -------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH-RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASR  203 (314)
Q Consensus       134 -------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~~  203 (314)
                             .+++++++++||.++++.... ....... ......+         ...+.+++|+|++++.++..+.  ..|
T Consensus       166 ~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~p---------~~~~~~~~dvA~~i~~l~s~~~~~~tG  235 (249)
T 1o5i_A          166 TLSFEVAPYGITVNCVAPGWTETERVKE-LLSEEKKKQVESQIP---------MRRMAKPEEIASVVAFLCSEKASYLTG  235 (249)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCCTTHHH-HSCHHHHHHHHTTST---------TSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHhhhcCeEEEEEeeCCCccCcccc-cchhhHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCccccCCCC
Confidence                   368999999999999874210 0011111 1211111         1347899999999999997532  358


Q ss_pred             ceEEecCCcc
Q 021331          204 QVFNISGEKY  213 (314)
Q Consensus       204 ~~~~i~~~~~  213 (314)
                      +++++.++..
T Consensus       236 ~~~~vdgG~~  245 (249)
T 1o5i_A          236 QTIVVDGGLS  245 (249)
T ss_dssp             CEEEESTTCC
T ss_pred             CEEEECCCcc
Confidence            8999998853

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.67  E-value=8e-16  Score=130.45  Aligned_cols=195  Identities=13%  Similarity=0.092  Sum_probs=131.1

Q ss_pred             CCcc--cccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+  |+||.++++.|+++|++|++++|+... ...+     ..+.....++.++.+|++|++++.++++..     ++
T Consensus        27 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  100 (285)
T 2p91_A           27 TGVANERSIAYGIAKSFHREGAQLAFTYATPKL-EKRV-----REIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSL  100 (285)
T ss_dssp             CCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             ECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHH-HHHH-----HHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            7998  999999999999999999999998641 1000     111111134788999999999888887643     68


Q ss_pred             cEEEEcCCCCcc------------------------cHHHHHHh----CC-CCCcEEEEeeceeeccCCCCCccCccccc
Q 021331           74 DVVYDINGREAD------------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCESRHKG  124 (314)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~~~~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (314)
                      |++||+||....                        ++.+++++    +. ...++|++||...+...   +....|+.+
T Consensus       101 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~~s  177 (285)
T 2p91_A          101 DIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVV---PHYNVMGIA  177 (285)
T ss_dssp             CEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBC---TTTTHHHHH
T ss_pred             CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCC---CCccHHHHH
Confidence            999999986421                        12233333    32 34699999997665332   222258999


Q ss_pred             hhhHHHHHH-------hcCCceEEEecCeeeCCCCCCc-hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          125 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       125 k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      |...+.+.+       ..++++++++||.|+++..... ........+....++         ..+.+++|+|++++.++
T Consensus       178 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva~~~~~l~  248 (285)
T 2p91_A          178 KAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF---------GKPITIEDVGDTAVFLC  248 (285)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHc
Confidence            998887764       2489999999999999853221 112222222222211         13567999999999998


Q ss_pred             cCCc--cCCceEEecCCcc
Q 021331          197 GNEK--ASRQVFNISGEKY  213 (314)
Q Consensus       197 ~~~~--~~~~~~~i~~~~~  213 (314)
                      ....  ..|+++++.++..
T Consensus       249 s~~~~~~tG~~~~vdgg~~  267 (285)
T 2p91_A          249 SDWARAITGEVVHVDNGYH  267 (285)
T ss_dssp             SGGGTTCCSCEEEESTTGG
T ss_pred             CCcccCCCCCEEEECCCcc
Confidence            7532  2588999998853

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.66  E-value=6.4e-16  Score=129.95  Aligned_cols=195  Identities=17%  Similarity=0.201  Sum_probs=131.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++++.......+.    ..+.....++.++.+|++|++++++++++.     ++|+
T Consensus        37 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  112 (271)
T 3v2g_A           37 TGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVV----SEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDI  112 (271)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            7999999999999999999999999776543211110    122223467889999999999888887643     7999


Q ss_pred             EEEcCCCCc--------------------ccH----HHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           76 VYDINGREA--------------------DEV----EPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~----~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      +||+||...                    .++    +.++..+....++|++||......  ..+....|+.+|...+.+
T Consensus       113 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~--~~~~~~~Y~asKaa~~~l  190 (271)
T 3v2g_A          113 LVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELV--PWPGISLYSASKAALAGL  190 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCC--CSTTCHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccC--CCCCchHHHHHHHHHHHH
Confidence            999998632                    112    223333445579999998543211  112223699999988777


Q ss_pred             HH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cC
Q 021331          132 LE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--AS  202 (314)
Q Consensus       132 ~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~  202 (314)
                      .+       ..++++..++||.|.++......  ..........+.         ..+.+.+|+|++++.++....  ..
T Consensus       191 ~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~---------~r~~~pedvA~~v~fL~s~~~~~it  259 (271)
T 3v2g_A          191 TKGLARDLGPRGITVNIVHPGSTDTDMNPADG--DHAEAQRERIAT---------GSYGEPQDIAGLVAWLAGPQGKFVT  259 (271)
T ss_dssp             HHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC--SSHHHHHHTCTT---------SSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHhhhhCeEEEEEecCCCcCCcccccc--hhHHHHHhcCCC---------CCCCCHHHHHHHHHHHhCcccCCcc
Confidence            53       35899999999999987532110  011122222111         235679999999999997532  36


Q ss_pred             CceEEecCCc
Q 021331          203 RQVFNISGEK  212 (314)
Q Consensus       203 ~~~~~i~~~~  212 (314)
                      |+++++.||.
T Consensus       260 G~~i~vdGG~  269 (271)
T 3v2g_A          260 GASLTIDGGA  269 (271)
T ss_dssp             SCEEEESTTT
T ss_pred             CCEEEeCcCc
Confidence            8999999875

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.66  E-value=3e-16  Score=130.79  Aligned_cols=189  Identities=17%  Similarity=0.096  Sum_probs=126.7

Q ss_pred             CCcccccHHHHHHHHHHCCCe-EEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCCh-hhHHHhhhcC-----
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDY-DFVKSSLSAK-----   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~-~~l~~~~~~~-----   71 (314)
                      |||+|+||.++++.|+++|++ |++++|+.....  +     ..+.+.  ..++.++.+|++|+ +++.++++..     
T Consensus        11 tGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~--~-----~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A           11 VAALGGIGLDTSRELVKRNLKNFVILDRVENPTA--L-----AELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHH--H-----HHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             ECCCChHHHHHHHHHHHCCCcEEEEEecCchHHH--H-----HHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            799999999999999999996 999998864210  0     011111  24688999999998 8887777542     


Q ss_pred             CccEEEEcCCCCc------------ccHHHHHHh----CC-C----CCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           72 GFDVVYDINGREA------------DEVEPILDA----LP-N----LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        72 ~~d~vi~~a~~~~------------~~~~~~~~~----~~-~----~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      ++|++||+||...            .++.+++++    +. .    ..++|++||...+...   +....|+.+|...+.
T Consensus        84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~~sK~a~~~  160 (254)
T 1sby_A           84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI---HQVPVYSASKAAVVS  160 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC---TTSHHHHHHHHHHHH
T ss_pred             CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC---CCchHHHHHHHHHHH
Confidence            7999999998632            223334443    32 1    4579999998776432   222369999998887


Q ss_pred             HHHh-------cCCceEEEecCeeeCCCCCC--chh--HHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          131 VLES-------KGVNWTSLRPVYIYGPLNYN--PVE--EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       131 ~~~~-------~~~~~~ilR~~~v~g~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      +.+.       .++++++++||.+.++....  ...  .........            ...+.+++|+|++++.+++..
T Consensus       161 ~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~dvA~~i~~~~~~~  228 (254)
T 1sby_A          161 FTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL------------SHPTQTSEQCGQNFVKAIEAN  228 (254)
T ss_dssp             HHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT------------TSCCEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHh------------cCCCCCHHHHHHHHHHHHHcC
Confidence            7642       68999999999998862100  000  000011110            012348999999999988743


Q ss_pred             ccCCceEEecCCc
Q 021331          200 KASRQVFNISGEK  212 (314)
Q Consensus       200 ~~~~~~~~i~~~~  212 (314)
                       ..|.+|++.++.
T Consensus       229 -~~G~~~~v~gG~  240 (254)
T 1sby_A          229 -KNGAIWKLDLGT  240 (254)
T ss_dssp             -CTTCEEEEETTE
T ss_pred             -CCCCEEEEeCCc
Confidence             368899999884

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.66  E-value=1.1e-15  Score=131.51  Aligned_cols=208  Identities=12%  Similarity=0.108  Sum_probs=133.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCc-------hhhhhccCceEEEEecCCChhhHHHhhhcC--
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~--   71 (314)
                      |||+|+||.++++.|+++|++|++++|+.............       ..+.....++.++.+|++|++++.++++..  
T Consensus        52 TGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  131 (317)
T 3oec_A           52 TGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALA  131 (317)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            89999999999999999999999999874331111110000       112223457899999999999988887643  


Q ss_pred             ---CccEEEEcCCCCc--------------------ccHHHHHHh----CC---CCCcEEEEeeceeeccCCCCCccCcc
Q 021331           72 ---GFDVVYDINGREA--------------------DEVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCESR  121 (314)
Q Consensus        72 ---~~d~vi~~a~~~~--------------------~~~~~~~~~----~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (314)
                         ++|++||+||...                    .++..++++    +.   ...+||++||...+...   +....|
T Consensus       132 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~---~~~~~Y  208 (317)
T 3oec_A          132 EFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA---PGQSHY  208 (317)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC---TTBHHH
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC---CCCcch
Confidence               7999999999632                    112233333    32   24679999997665322   222369


Q ss_pred             ccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcC---CC----ee-cCCCCCceeeeeeHH
Q 021331          122 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG---RP----IP-IPGSGIQVTQLGHVK  186 (314)
Q Consensus       122 ~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~---~~----~~-~~~~~~~~~~~i~~~  186 (314)
                      +.+|...+.+.+       ..|+++..++||.|.++.....   .........   ..    .. +.........+.+++
T Consensus       209 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~pe  285 (317)
T 3oec_A          209 AASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNE---KLLKMFLPHLENPTREDAAELFSQLTLLPIPWVEPE  285 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCH---HHHHHHCTTCSSCCHHHHHHHHTTTCSSSSSSBCHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccch---hhhhhhhhhccccchhHHHHHHhhhccCCCCCCCHH
Confidence            999988877764       3589999999999988621100   001111000   00    00 000011114678999


Q ss_pred             HHHHHHHHHhcCCc--cCCceEEecCCccc
Q 021331          187 DLARAFVQVLGNEK--ASRQVFNISGEKYV  214 (314)
Q Consensus       187 D~a~~~~~~l~~~~--~~~~~~~i~~~~~~  214 (314)
                      |+|++++.++....  ..|+++++.||..+
T Consensus       286 dvA~av~fL~s~~a~~itG~~i~vdGG~~~  315 (317)
T 3oec_A          286 DVSNAVAWLASDEARYIHGAAIPVDGGQLA  315 (317)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHcCCcccCCCCCEEEECcchhh
Confidence            99999999987533  36899999998643

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.66  E-value=2.4e-15  Score=122.87  Aligned_cols=189  Identities=15%  Similarity=0.161  Sum_probs=134.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-CccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi~~   79 (314)
                      |||++.||.++++.|.++|++|++++|+.+......           ..++..+.+|++|+++++++++++ ++|++||+
T Consensus        17 TGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNN   85 (242)
T 4b79_A           17 TGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-----------HPRIRREELDITDSQRLQRLFEALPRLDVLVNN   85 (242)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-----------CTTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-----------cCCeEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence            799999999999999999999999999877643222           267899999999999999998876 58999999


Q ss_pred             CCCCcc------------------c----HHHHHHhCC-CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHH---
Q 021331           80 NGREAD------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLE---  133 (314)
Q Consensus        80 a~~~~~------------------~----~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~---  133 (314)
                      ||....                  +    ++.++..++ +..++|++||......   .|....|..+|.....+.+   
T Consensus        86 AGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~---~~~~~~Y~asKaav~~ltr~lA  162 (242)
T 4b79_A           86 AGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFG---SADRPAYSASKGAIVQLTRSLA  162 (242)
T ss_dssp             CCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSC---CSSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCC---CCCCHHHHHHHHHHHHHHHHHH
Confidence            997421                  1    233333343 4468999999655322   2222368999988777653   


Q ss_pred             ----hcCCceEEEecCeeeCCCCCCc-hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cCCceE
Q 021331          134 ----SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVF  206 (314)
Q Consensus       134 ----~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~~~~~  206 (314)
                          .+|+++..|.||.|..|..... .-....+.+....|+         ..+-..+|+|.+++.+++...  -.|+++
T Consensus       163 ~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~Pl---------gR~g~peeiA~~v~fLaSd~a~~iTG~~l  233 (242)
T 4b79_A          163 CEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPL---------ARWGEAPEVASAAAFLCGPGASFVTGAVL  233 (242)
T ss_dssp             HHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTT---------CSCBCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             HHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCchhcCccCceE
Confidence                4689999999999987732111 112233334333332         135568999999999997633  378899


Q ss_pred             EecCCc
Q 021331          207 NISGEK  212 (314)
Q Consensus       207 ~i~~~~  212 (314)
                      .+.||.
T Consensus       234 ~VDGG~  239 (242)
T 4b79_A          234 AVDGGY  239 (242)
T ss_dssp             EESTTG
T ss_pred             EECccH
Confidence            999885

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.66  E-value=1.5e-16  Score=134.56  Aligned_cols=184  Identities=18%  Similarity=0.173  Sum_probs=121.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+||.++++.|+++|++|++++|+........     ..+...  ...+.++.+|++|++++.++++..     ++
T Consensus        38 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  112 (279)
T 1xg5_A           38 TGASGGIGAAVARALVQQGLKVVGCARTVGNIEELA-----AECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV  112 (279)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHH-----HHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999999865422110     011111  145788999999999988887642     69


Q ss_pred             cEEEEcCCCCcc--------------------c----HHHHHHhCC--CC--CcEEEEeeceeeccCCCCCccCccccch
Q 021331           74 DVVYDINGREAD--------------------E----VEPILDALP--NL--EQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        74 d~vi~~a~~~~~--------------------~----~~~~~~~~~--~~--~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      |+|||+||....                    +    ++.++..+.  +.  .+||++||...+.... .+....|+.+|
T Consensus       113 D~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~-~~~~~~Y~~sK  191 (279)
T 1xg5_A          113 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLP-LSVTHFYSATK  191 (279)
T ss_dssp             SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCS-CGGGHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCC-CCCCchhHHHH
Confidence            999999986321                    1    455666665  33  7999999987663211 12222688999


Q ss_pred             hhHHHHHH---------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          126 LNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       126 ~~~e~~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      ...+.+.+         ..++++++++|+.|.++.     ...    .......... .......+++++|+|++++.++
T Consensus       192 ~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~-----~~~----~~~~~~~~~~-~~~~~~~~~~~~dvA~~i~~l~  261 (279)
T 1xg5_A          192 YAVTALTEGLRQELREAQTHIRATCISPGVVETQF-----AFK----LHDKDPEKAA-ATYEQMKCLKPEDVAEAVIYVL  261 (279)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSH-----HHH----HTTTCHHHHH-HHHC---CBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchh-----hhh----hcccChhHHh-hhcccccCCCHHHHHHHHHHHh
Confidence            88776653         357999999999998762     110    0000000000 0001124688999999999999


Q ss_pred             cCCc
Q 021331          197 GNEK  200 (314)
Q Consensus       197 ~~~~  200 (314)
                      ..+.
T Consensus       262 ~~~~  265 (279)
T 1xg5_A          262 STPA  265 (279)
T ss_dssp             HSCT
T ss_pred             cCCc
Confidence            8654

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.66  E-value=2.5e-16  Score=133.63  Aligned_cols=207  Identities=17%  Similarity=0.176  Sum_probs=133.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCC----CCCc-------hhhhhccCceEEEEecCCChhhHHHhhh
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP----GESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLS   69 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~-------~~~~~~~~~~~~~~~D~~d~~~l~~~~~   69 (314)
                      |||+|+||.++++.|+++|++|++++|+.........    ....       ..+.....++.++.+|++|++++.++++
T Consensus        17 TGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   96 (286)
T 3uve_A           17 TGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVD   96 (286)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHH
Confidence            7999999999999999999999999998432111100    0000       1112224578999999999999888876


Q ss_pred             cC-----CccEEEEcCCCCcc---------------------cHHHHHHh----CC--C-CCcEEEEeeceeeccCCCCC
Q 021331           70 AK-----GFDVVYDINGREAD---------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLP  116 (314)
Q Consensus        70 ~~-----~~d~vi~~a~~~~~---------------------~~~~~~~~----~~--~-~~~~i~~Ss~~v~~~~~~~~  116 (314)
                      ..     ++|++||+||....                     ++.+++++    +.  + ..++|++||...+...   +
T Consensus        97 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~  173 (286)
T 3uve_A           97 SGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAY---P  173 (286)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---T
T ss_pred             HHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccCC---C
Confidence            42     79999999996311                     12223332    32  2 4689999997765332   2


Q ss_pred             ccCccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcC---CCe----e--cCCCCCcee
Q 021331          117 HCESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG---RPI----P--IPGSGIQVT  180 (314)
Q Consensus       117 ~~e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~---~~~----~--~~~~~~~~~  180 (314)
                      ....|+.+|...+.+.+       .+++++..++||.|..+.......   .......   ...    .  ....... .
T Consensus       174 ~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p-~  249 (286)
T 3uve_A          174 HTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGT---FKMFRPDLENPGPDDMAPICQMFHTLP-I  249 (286)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHH---HHHHCTTSSSCCHHHHHHHHHTTCSSS-C
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccch---hhhccccccccchhhHHHHHHhhhccC-C
Confidence            22368999988777653       368999999999999874322110   0001000   000    0  0011111 4


Q ss_pred             eeeeHHHHHHHHHHHhcCCc--cCCceEEecCCccc
Q 021331          181 QLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYV  214 (314)
Q Consensus       181 ~~i~~~D~a~~~~~~l~~~~--~~~~~~~i~~~~~~  214 (314)
                      .+.+.+|+|++++.++....  ..|+++++.||..+
T Consensus       250 r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          250 PWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence            57899999999999997642  36899999998654

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.66  E-value=1.5e-16  Score=135.76  Aligned_cols=210  Identities=12%  Similarity=0.161  Sum_probs=133.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCC-------chhhhhccCceEEEEecCCChhhHHHhhhcC--
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES-------DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~--   71 (314)
                      |||+|+||.++++.|+++|++|++++|+.......+....       ...+.....++.++.+|++|++++.+++++.  
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  113 (299)
T 3t7c_A           34 TGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVT  113 (299)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            7999999999999999999999999988532111111000       0122233467899999999999888887642  


Q ss_pred             ---CccEEEEcCCCCcc---------------------cHHHHHHh----CC---CCCcEEEEeeceeeccCCCCCccCc
Q 021331           72 ---GFDVVYDINGREAD---------------------EVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCES  120 (314)
Q Consensus        72 ---~~d~vi~~a~~~~~---------------------~~~~~~~~----~~---~~~~~i~~Ss~~v~~~~~~~~~~e~  120 (314)
                         ++|++||+||....                     ++..+.++    +.   +..++|++||...+...   +....
T Consensus       114 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~---~~~~~  190 (299)
T 3t7c_A          114 QLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA---ENIGN  190 (299)
T ss_dssp             HHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCC---TTCHH
T ss_pred             HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC---CCcch
Confidence               69999999986321                     12223332    22   35689999997665332   22236


Q ss_pred             cccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCee------cCCCCCceeeeeeHHH
Q 021331          121 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP------IPGSGIQVTQLGHVKD  187 (314)
Q Consensus       121 ~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~i~~~D  187 (314)
                      |+.+|...+.+.+       ..|+++..++||.|.++.....................      ....... ..+.+.+|
T Consensus       191 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~ped  269 (299)
T 3t7c_A          191 YIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP-IPYVEPAD  269 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSS-CSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcccC-cCCCCHHH
Confidence            9999988877653       35899999999999988532211000000000000000      0000001 24778999


Q ss_pred             HHHHHHHHhcCCc--cCCceEEecCCccc
Q 021331          188 LARAFVQVLGNEK--ASRQVFNISGEKYV  214 (314)
Q Consensus       188 ~a~~~~~~l~~~~--~~~~~~~i~~~~~~  214 (314)
                      +|++++.+++...  ..|+++++.||..+
T Consensus       270 vA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          270 ISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence            9999999997643  36899999998754

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.65  E-value=2.6e-16  Score=131.72  Aligned_cols=193  Identities=19%  Similarity=0.153  Sum_probs=123.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        10 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   84 (264)
T 3tfo_A           10 TGASGGIGEGIARELGVAGAKILLGARRQARIEAIA-----TEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDV   84 (264)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999875532111     122222457889999999999888887643     7999


Q ss_pred             EEEcCCCCcc--------------------cH----HHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||....                    ++    +.++..+.  +..++|++||...+...   +....|+.+|...+
T Consensus        85 lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~---~~~~~Y~asKaal~  161 (264)
T 3tfo_A           85 LVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVV---PTAAVYCATKFAVR  161 (264)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC---TTCHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccC---CCChhHHHHHHHHH
Confidence            9999987421                    12    23333333  56799999997665332   22236899998877


Q ss_pred             HHHH----h-cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCcc--C
Q 021331          130 SVLE----S-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA--S  202 (314)
Q Consensus       130 ~~~~----~-~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~--~  202 (314)
                      .+.+    + .++++..++||.|..+....     .    ..........  .....+.+.+|+|++++.+++.+..  .
T Consensus       162 ~l~~~la~e~~gIrvn~v~PG~v~T~~~~~-----~----~~~~~~~~~~--~~~~~~~~pedvA~~v~~l~s~~~~~~~  230 (264)
T 3tfo_A          162 AISDGLRQESTNIRVTCVNPGVVESELAGT-----I----THEETMAAMD--TYRAIALQPADIARAVRQVIEAPQSVDT  230 (264)
T ss_dssp             HHHHHHHHHCSSEEEEEEEECCC----------------------------------CCCHHHHHHHHHHHHHSCTTEEE
T ss_pred             HHHHHHHHhCCCCEEEEEecCCCcCccccc-----c----cchhHHHHHH--hhhccCCCHHHHHHHHHHHhcCCccCcc
Confidence            7653    2 27899999999987762111     0    0000000000  0111257899999999999987653  3


Q ss_pred             CceEEecCCc
Q 021331          203 RQVFNISGEK  212 (314)
Q Consensus       203 ~~~~~i~~~~  212 (314)
                      +++....+++
T Consensus       231 ~~i~i~p~~~  240 (264)
T 3tfo_A          231 TEITIRPTAS  240 (264)
T ss_dssp             EEEEEEECC-
T ss_pred             ceEEEecCcc
Confidence            4555555444

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.65  E-value=1.2e-15  Score=128.05  Aligned_cols=198  Identities=9%  Similarity=0.076  Sum_probs=133.7

Q ss_pred             CCcccc--cHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhcc-CceEEEEecCCChhhHHHhhhcC-----C
Q 021331            1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----G   72 (314)
Q Consensus         1 tGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~l~~~~~~~-----~   72 (314)
                      |||+|+  ||.++++.|+++|++|++++|+..... .+.    ....... .++.++.+|++|+++++++++..     .
T Consensus        13 TGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (266)
T 3oig_A           13 MGVANKRSIAWGIARSLHEAGARLIFTYAGERLEK-SVH----ELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGV   87 (266)
T ss_dssp             ECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HHH----HHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSC
T ss_pred             EcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHH-HHH----HHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            799988  999999999999999999998754311 000    0011111 26899999999999988888643     6


Q ss_pred             ccEEEEcCCCCc------------------------ccHHHHHHh----CCCCCcEEEEeeceeeccCCCCCccCccccc
Q 021331           73 FDVVYDINGREA------------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCESRHKG  124 (314)
Q Consensus        73 ~d~vi~~a~~~~------------------------~~~~~~~~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (314)
                      +|++||+||...                        .++.+++++    +....++|++||...+...   |....|+.+
T Consensus        88 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~as  164 (266)
T 3oig_A           88 IHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVM---PNYNVMGVA  164 (266)
T ss_dssp             CCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC---TTTHHHHHH
T ss_pred             eeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccC---CCcchhHHH
Confidence            899999998642                        012233333    3344689999997665322   222368999


Q ss_pred             hhhHHHHHH-------hcCCceEEEecCeeeCCCCCCc-hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          125 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       125 k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      |...+.+.+       ..++++..++||.+..+..... .............+.         ..+.+.+|+|++++.++
T Consensus       165 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~p~dva~~v~~l~  235 (266)
T 3oig_A          165 KASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPL---------RRTTTPEEVGDTAAFLF  235 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHc
Confidence            988877753       3579999999999988642211 112222333222211         23567899999999999


Q ss_pred             cCCc--cCCceEEecCCcccc
Q 021331          197 GNEK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       197 ~~~~--~~~~~~~i~~~~~~s  215 (314)
                      ..+.  ..|+++++.+|....
T Consensus       236 s~~~~~~tG~~i~vdGG~~~~  256 (266)
T 3oig_A          236 SDMSRGITGENLHVDSGFHIT  256 (266)
T ss_dssp             SGGGTTCCSCEEEESTTGGGC
T ss_pred             CCchhcCcCCEEEECCCeEEe
Confidence            8633  478999999987543

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.65  E-value=4.7e-16  Score=131.62  Aligned_cols=195  Identities=17%  Similarity=0.175  Sum_probs=133.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC----CccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~----~~d~v   76 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......        .+...++.++.+|++|++++.++++..    ++|++
T Consensus        36 TGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~--------~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l  107 (281)
T 3ppi_A           36 SGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALA--------DELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA  107 (281)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH--------HHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence            799999999999999999999999999876532111        111357899999999999988887642    68999


Q ss_pred             EEc-CCCCc-------------------------ccHHHHHHhC------------CCCCcEEEEeeceeeccCCCCCcc
Q 021331           77 YDI-NGREA-------------------------DEVEPILDAL------------PNLEQFIYCSSAGVYLKSDLLPHC  118 (314)
Q Consensus        77 i~~-a~~~~-------------------------~~~~~~~~~~------------~~~~~~i~~Ss~~v~~~~~~~~~~  118 (314)
                      ||+ ++...                         .++.++.+++            .+..++|++||...+....   ..
T Consensus       108 v~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~  184 (281)
T 3ppi_A          108 VVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQI---GQ  184 (281)
T ss_dssp             EECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCT---TC
T ss_pred             EEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCC---CC
Confidence            999 54311                         1122233322            1335899999977653322   22


Q ss_pred             CccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHH
Q 021331          119 ESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  191 (314)
Q Consensus       119 e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  191 (314)
                      ..|+.+|...+.+.+       ..++++..++||.|..+.... .............+.  .      ..+.+++|+|++
T Consensus       185 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~--~------~~~~~pedvA~~  255 (281)
T 3ppi_A          185 TAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES-VGEEALAKFAANIPF--P------KRLGTPDEFADA  255 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-TCHHHHHHHHHTCCS--S------SSCBCHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhc-ccHHHHHHHHhcCCC--C------CCCCCHHHHHHH
Confidence            369999987776653       357999999999987652111 112222223222221  0      247789999999


Q ss_pred             HHHHhcCCccCCceEEecCCcccc
Q 021331          192 FVQVLGNEKASRQVFNISGEKYVT  215 (314)
Q Consensus       192 ~~~~l~~~~~~~~~~~i~~~~~~s  215 (314)
                      ++.+++++...|+++++.+|..++
T Consensus       256 v~~l~s~~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          256 AAFLLTNGYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             HHHHHHCSSCCSCEEEESTTCCCC
T ss_pred             HHHHHcCCCcCCcEEEECCCcccC
Confidence            999998766689999999997654

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.65  E-value=2.7e-15  Score=127.80  Aligned_cols=197  Identities=13%  Similarity=0.106  Sum_probs=134.9

Q ss_pred             CCccc--ccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|  +||.++++.|+++|++|++++|+..... .+     ..+......+.++.+|++|+++++++++..     ++
T Consensus        36 TGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~-~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  109 (296)
T 3k31_A           36 IGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKK-RV-----DPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSL  109 (296)
T ss_dssp             ECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HH-----HHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             EeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHH-HH-----HHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            79987  9999999999999999999999854311 00     011111245788999999999998888653     68


Q ss_pred             cEEEEcCCCCcc------------------------cHHHHHHh----CCCCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           74 DVVYDINGREAD------------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~~~~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      |++||+||....                        ++.+++++    +....++|++||...+...   +....|+.+|
T Consensus       110 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~---~~~~~Y~asK  186 (296)
T 3k31_A          110 DFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVV---PHYNVMGVCK  186 (296)
T ss_dssp             SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC---TTTTHHHHHH
T ss_pred             CEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCC---CCchhhHHHH
Confidence            999999986421                        12233333    3344589999997665322   2223689999


Q ss_pred             hhHHHHHH-------hcCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          126 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       126 ~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      ...+.+.+       ..++++..++||.|.++...... ............++         ..+.+.+|+|++++.++.
T Consensus       187 aal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~fL~s  257 (296)
T 3k31_A          187 AALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPL---------RRNTTLDDVGGAALYLLS  257 (296)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcC
Confidence            88877754       35899999999999987543221 12222222222221         235678999999999998


Q ss_pred             CC--ccCCceEEecCCcccc
Q 021331          198 NE--KASRQVFNISGEKYVT  215 (314)
Q Consensus       198 ~~--~~~~~~~~i~~~~~~s  215 (314)
                      ..  ...|+++++.+|..+.
T Consensus       258 ~~a~~itG~~i~vdGG~~~~  277 (296)
T 3k31_A          258 DLGRGTTGETVHVDCGYHVV  277 (296)
T ss_dssp             GGGTTCCSCEEEESTTGGGC
T ss_pred             CccCCccCCEEEECCCcccc
Confidence            63  2368999999997654

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.65  E-value=2.5e-16  Score=132.69  Aligned_cols=168  Identities=15%  Similarity=0.076  Sum_probs=119.5

Q ss_pred             CCcccccHHHHHHHHHH-CCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|++ .|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     ++|
T Consensus        10 TGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   84 (276)
T 1wma_A           10 TGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAV-----QQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   84 (276)
T ss_dssp             SSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHH-----HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHH-----HHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            89999999999999999 8999999999865422111     111112356889999999999888887643     799


Q ss_pred             EEEEcCCCCc--------------------ccHHHHHHhCC----CCCcEEEEeeceeecc--C----------------
Q 021331           75 VVYDINGREA--------------------DEVEPILDALP----NLEQFIYCSSAGVYLK--S----------------  112 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~~~~~~~----~~~~~i~~Ss~~v~~~--~----------------  112 (314)
                      +|||+||...                    .++.++++++.    ...+||++||...+..  .                
T Consensus        85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e  164 (276)
T 1wma_A           85 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITE  164 (276)
T ss_dssp             EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCH
T ss_pred             EEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccccch
Confidence            9999998632                    12334555543    2348999999766521  0                


Q ss_pred             ---------------------CCCCccCccccchhhHHHHHH-------h----cCCceEEEecCeeeCCCCCCchhHHH
Q 021331          113 ---------------------DLLPHCESRHKGKLNTESVLE-------S----KGVNWTSLRPVYIYGPLNYNPVEEWF  160 (314)
Q Consensus       113 ---------------------~~~~~~e~~~~~k~~~e~~~~-------~----~~~~~~ilR~~~v~g~~~~~~~~~~~  160 (314)
                                           ...|. ..|+.+|...+.+.+       .    .++++++++||.|.++....      
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~------  237 (276)
T 1wma_A          165 EELVGLMNKFVEDTKKGVHQKEGWPS-SAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP------  237 (276)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTTTTCCS-CHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT------
T ss_pred             hhhhhhhhhhhhhhcccccccCCCcc-chhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc------
Confidence                                 01122 369999988777653       2    58999999999988763211      


Q ss_pred             HHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          161 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                                         ..+.+.+|+|++++.++..+
T Consensus       238 -------------------~~~~~~~~~a~~~~~l~~~~  257 (276)
T 1wma_A          238 -------------------KATKSPEEGAETPVYLALLP  257 (276)
T ss_dssp             -------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred             -------------------cccCChhHhhhhHhhhhcCc
Confidence                               13678999999999999754

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.65  E-value=3e-15  Score=126.52  Aligned_cols=195  Identities=9%  Similarity=0.083  Sum_probs=133.7

Q ss_pred             CCcccc--cHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+  ||.++++.|+++|++|++++|+...  ..+     +.+.....++.++.+|++|++++.++++..     ++
T Consensus        32 TGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~--~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  104 (280)
T 3nrc_A           32 TGLLSNKSIAYGIAKAMHREGAELAFTYVGQFK--DRV-----EKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGL  104 (280)
T ss_dssp             CCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCH--HHH-----HHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSC
T ss_pred             ECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHH--HHH-----HHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            799966  9999999999999999999998711  000     122222356889999999999988888643     68


Q ss_pred             cEEEEcCCCCcc-------------------------cHHHHHHh----CC-CCCcEEEEeeceeeccCCCCCccCcccc
Q 021331           74 DVVYDINGREAD-------------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCESRHK  123 (314)
Q Consensus        74 d~vi~~a~~~~~-------------------------~~~~~~~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (314)
                      |++||+||....                         ++.+++++    +. ...++|++||...+...   +....|+.
T Consensus       105 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~a  181 (280)
T 3nrc_A          105 DAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAM---PSYNTMGV  181 (280)
T ss_dssp             CEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCC---TTTHHHHH
T ss_pred             CEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCC---CCchhhHH
Confidence            999999986421                         11223333    33 45689999997665332   22226899


Q ss_pred             chhhHHHHHH-------hcCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHH
Q 021331          124 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  195 (314)
Q Consensus       124 ~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  195 (314)
                      +|...+.+.+       ..++++..++||.|..+.... ..............+.         ..+.+.+|+|++++.+
T Consensus       182 sKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~~~~~pedvA~~v~~l  252 (280)
T 3nrc_A          182 AKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPL---------KKNVDIMEVGNTVAFL  252 (280)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTT---------CSCCCHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHH
Confidence            9988877763       368999999999998874221 1112223333222221         2366789999999999


Q ss_pred             hcCCc--cCCceEEecCCccc
Q 021331          196 LGNEK--ASRQVFNISGEKYV  214 (314)
Q Consensus       196 l~~~~--~~~~~~~i~~~~~~  214 (314)
                      +....  ..|+++++.+|..+
T Consensus       253 ~s~~~~~~tG~~i~vdgG~~~  273 (280)
T 3nrc_A          253 CSDMATGITGEVVHVDAGYHC  273 (280)
T ss_dssp             TSGGGTTCCSCEEEESTTGGG
T ss_pred             hCcccCCcCCcEEEECCCccc
Confidence            97632  47899999998754

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.65  E-value=4.9e-16  Score=130.14  Aligned_cols=174  Identities=16%  Similarity=0.098  Sum_probs=117.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        35 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~  109 (262)
T 3rkr_A           35 TGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVE-----REIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDV  109 (262)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999876532111     122222467899999999999988887642     6999


Q ss_pred             EEEcCCCC-c--------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGRE-A--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~-~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      |||+||.. .                    .++.+++++    +.  +..+||++||...+....   ....|+.+|...
T Consensus       110 lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~asKaa~  186 (262)
T 3rkr_A          110 LVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVA---DGAAYTASKWGL  186 (262)
T ss_dssp             EEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCT---TCHHHHHHHHHH
T ss_pred             EEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCC---CCchHHHHHHHH
Confidence            99999972 1                    112223333    32  567999999977653322   222689999887


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      +.+.+       ..++++.+++||.+..+...     .    ...         ......+++.+|+|++++.++..+.
T Consensus       187 ~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~-----~----~~~---------~~~~~~~~~p~dvA~~v~~l~s~~~  247 (262)
T 3rkr_A          187 NGLMTSAAEELRQHQVRVSLVAPGSVRTEFGV-----G----LSA---------KKSALGAIEPDDIADVVALLATQAD  247 (262)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCC----------------------------------CCCHHHHHHHHHHHHTCCT
T ss_pred             HHHHHHHHHHhhhcCcEEEEEecCCCcCCccc-----c----ccc---------ccccccCCCHHHHHHHHHHHhcCcc
Confidence            77653       36899999999988765211     0    000         0112346789999999999998743

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.64  E-value=1.6e-15  Score=129.00  Aligned_cols=197  Identities=10%  Similarity=0.078  Sum_probs=132.6

Q ss_pred             CCcccc--cHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+  ||.++++.|+++|++|++++|+..... .+     ..+.....++.++.+|++|+++++++++..     ++
T Consensus        37 TGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  110 (293)
T 3grk_A           37 LGVANNRSIAWGIAKAAREAGAELAFTYQGDALKK-RV-----EPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGKL  110 (293)
T ss_dssp             ECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHH-HH-----HHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             EcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHH-HH-----HHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            799988  999999999999999999998843211 00     111122356889999999999988887643     79


Q ss_pred             cEEEEcCCCCcc------------------------cHHHH----HHhCCCCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           74 DVVYDINGREAD------------------------EVEPI----LDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~~----~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      |++||+||....                        ++..+    +..+....++|++||...+....   ....|+.+|
T Consensus       111 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~---~~~~Y~asK  187 (293)
T 3grk_A          111 DFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMP---NYNVMGVAK  187 (293)
T ss_dssp             SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCT---TTTHHHHHH
T ss_pred             CEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCC---chHHHHHHH
Confidence            999999996421                        12223    33334456899999977654322   223689999


Q ss_pred             hhHHHHHH-------hcCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          126 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       126 ~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      ...+.+.+       .+++++..++||.|.++.... ..............++         ..+.+.+|+|++++.++.
T Consensus       188 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~L~s  258 (293)
T 3grk_A          188 AALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL---------RRTVTIDEVGDVGLYFLS  258 (293)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcC
Confidence            88877763       358999999999998874221 1112222222222221         235678999999999998


Q ss_pred             CCc--cCCceEEecCCcccc
Q 021331          198 NEK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~~~s  215 (314)
                      ...  ..|+++++.+|..++
T Consensus       259 ~~~~~itG~~i~vdGG~~~~  278 (293)
T 3grk_A          259 DLSRSVTGEVHHADSGYHVI  278 (293)
T ss_dssp             GGGTTCCSCEEEESTTGGGB
T ss_pred             ccccCCcceEEEECCCcccC
Confidence            632  378999999997644

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.64  E-value=1.5e-15  Score=127.54  Aligned_cols=180  Identities=17%  Similarity=0.160  Sum_probs=126.1

Q ss_pred             CCcccccHHHHHHHHHHCC---CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC------
Q 021331            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~------   71 (314)
                      |||+|+||.++++.|+++|   ++|++++|+.+.... +     ..+.....++.++.+|++|++++.++++..      
T Consensus        27 TGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~-~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  100 (267)
T 1sny_A           27 TGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-L-----EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD  100 (267)
T ss_dssp             SCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH-H-----HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             ECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHH-H-----HHhhccCCceEEEEecCCChHHHHHHHHHHHHhcCC
Confidence            7999999999999999999   999999998765221 1     111112357899999999999998888643      


Q ss_pred             -CccEEEEcCCCCc---------------------ccHHHHHHhCC-----C------------CCcEEEEeeceeeccC
Q 021331           72 -GFDVVYDINGREA---------------------DEVEPILDALP-----N------------LEQFIYCSSAGVYLKS  112 (314)
Q Consensus        72 -~~d~vi~~a~~~~---------------------~~~~~~~~~~~-----~------------~~~~i~~Ss~~v~~~~  112 (314)
                       ++|+|||+||...                     .++.++++++.     .            ..+||++||...+...
T Consensus       101 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  180 (267)
T 1sny_A          101 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG  180 (267)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred             CCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccC
Confidence             6999999998643                     11223333321     1            4689999998776443


Q ss_pred             CCCCccCccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeH
Q 021331          113 DLLPHCESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  185 (314)
Q Consensus       113 ~~~~~~e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  185 (314)
                      ...+....|+.+|...+.+.+       ..+++++++||+.|..+....                         ..+++.
T Consensus       181 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------------------~~~~~~  235 (267)
T 1sny_A          181 NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-------------------------SAPLDV  235 (267)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-------------------------TCSBCH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-------------------------CCCCCH
Confidence            211122269999998887764       258999999999987662110                         024678


Q ss_pred             HHHHHHHHHHhcCC--ccCCceEEecCC
Q 021331          186 KDLARAFVQVLGNE--KASRQVFNISGE  211 (314)
Q Consensus       186 ~D~a~~~~~~l~~~--~~~~~~~~i~~~  211 (314)
                      +|+|+.++.++...  ...|..+.+.++
T Consensus       236 ~~~a~~~~~~~~~~~~~~~G~~~~~~g~  263 (267)
T 1sny_A          236 PTSTGQIVQTISKLGEKQNGGFVNYDGT  263 (267)
T ss_dssp             HHHHHHHHHHHHHCCGGGTTCEECTTSC
T ss_pred             HHHHHHHHHHHHhcCcCCCCcEEccCCc
Confidence            99999999999753  235666665544

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.64  E-value=1.7e-16  Score=133.78  Aligned_cols=195  Identities=12%  Similarity=0.101  Sum_probs=130.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC----CccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~----~~d~v   76 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..    ++|++
T Consensus        39 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~l  113 (275)
T 4imr_A           39 TGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQ-----QRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVDIL  113 (275)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHH-----HHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCCEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCCEE
Confidence            899999999999999999999999999876532111     122223467899999999998888877643    78999


Q ss_pred             EEcCCCCc--------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           77 YDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        77 i~~a~~~~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      ||+||...                    .++.+++++    +.  +..++|++||...+...   +....|+.+|...+.
T Consensus       114 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~---~~~~~Y~asKaa~~~  190 (275)
T 4imr_A          114 VINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPK---SVVTAYAATKAAQHN  190 (275)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---TTBHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC---CCchhhHHHHHHHHH
Confidence            99999632                    112233333    33  56799999997765421   111249999988877


Q ss_pred             HHH-------hcCCceEEEecCeeeCCCCCCch--hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          131 VLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       131 ~~~-------~~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      +.+       ..++++..++||.+..+......  ............ .+       ...+...+|+|++++.++.... 
T Consensus       191 l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~p-------~~r~~~pedvA~~v~fL~s~~a~  262 (275)
T 4imr_A          191 LIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTL-NW-------MGRAGRPEEMVGAALFLASEACS  262 (275)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHH-ST-------TCSCBCGGGGHHHHHHHHSGGGT
T ss_pred             HHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhc-Cc-------cCCCcCHHHHHHHHHHHcCcccC
Confidence            753       34899999999998876210000  001111111111 01       1235678999999999998643 


Q ss_pred             -cCCceEEecCC
Q 021331          201 -ASRQVFNISGE  211 (314)
Q Consensus       201 -~~~~~~~i~~~  211 (314)
                       ..|+++++.||
T Consensus       263 ~itG~~i~vdGG  274 (275)
T 4imr_A          263 FMTGETIFLTGG  274 (275)
T ss_dssp             TCCSCEEEESSC
T ss_pred             CCCCCEEEeCCC
Confidence             36889999886

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.64  E-value=3.5e-16  Score=131.22  Aligned_cols=198  Identities=17%  Similarity=0.181  Sum_probs=131.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh-c-cCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.. . ..++.++.+|++|++++.++++..     ++
T Consensus        14 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   88 (265)
T 3lf2_A           14 TGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAE-----SALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCA   88 (265)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            799999999999999999999999999875432111     01111 1 134889999999999888877643     68


Q ss_pred             cEEEEcCCCCcc--------------------cHHHHH----HhCC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           74 DVVYDINGREAD--------------------EVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        74 d~vi~~a~~~~~--------------------~~~~~~----~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      |++||+||....                    ++..+.    ..+.  +..++|++||...+...   +....|+.+|..
T Consensus        89 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asKaa  165 (265)
T 3lf2_A           89 SILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPE---PHMVATSAARAG  165 (265)
T ss_dssp             SEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCC---TTBHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCC---CCchhhHHHHHH
Confidence            999999996321                    122233    3333  45689999997665322   222368999988


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCc---------hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHH
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNP---------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  191 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  191 (314)
                      .+.+.+       .+|+++..++||.+.++.....         -...+..........+       ...+.+++|+|++
T Consensus       166 ~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r~~~pedvA~~  238 (265)
T 3lf2_A          166 VKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIP-------LGRLGKPIEAARA  238 (265)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCT-------TCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCC-------cCCCcCHHHHHHH
Confidence            877653       3589999999999887521000         0011111111111111       1346789999999


Q ss_pred             HHHHhcCCc--cCCceEEecCCcc
Q 021331          192 FVQVLGNEK--ASRQVFNISGEKY  213 (314)
Q Consensus       192 ~~~~l~~~~--~~~~~~~i~~~~~  213 (314)
                      ++.+++...  ..|+++++.||..
T Consensus       239 v~fL~s~~~~~itG~~i~vdGG~~  262 (265)
T 3lf2_A          239 ILFLASPLSAYTTGSHIDVSGGLS  262 (265)
T ss_dssp             HHHHHSGGGTTCCSEEEEESSSCC
T ss_pred             HHHHhCchhcCcCCCEEEECCCCc
Confidence            999997532  3788999998864

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.64  E-value=1.1e-16  Score=134.09  Aligned_cols=202  Identities=11%  Similarity=0.078  Sum_probs=125.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|....... +. .....+.....++.++.+|++|++++.++++..     ++|+
T Consensus        17 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~-~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   94 (262)
T 3ksu_A           17 AGGIKNLGALTAKTFALESVNLVLHYHQAKDSDT-AN-KLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDI   94 (262)
T ss_dssp             ETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHH-HH-HHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCSEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEecCccCHHH-HH-HHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999876432110 00 000112222357899999999999988888643     6999


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhC----CCCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           76 VYDINGREA--------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      +||+||...                    .++..+.+++    ++..++|++||...+.....   ...|+.+|...+.+
T Consensus        95 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~---~~~Y~asKaa~~~l  171 (262)
T 3ksu_A           95 AINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGF---YSTYAGNKAPVEHY  171 (262)
T ss_dssp             EEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCC---CCC-----CHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCC---CchhHHHHHHHHHH
Confidence            999999632                    1122333332    24468999999766543221   12588889887777


Q ss_pred             HH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-cCC
Q 021331          132 LE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASR  203 (314)
Q Consensus       132 ~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-~~~  203 (314)
                      .+       ..++++..++||.|..+.     ...    ..................+.+.+|+|++++.++.... ..|
T Consensus       172 ~~~la~e~~~~gi~vn~v~PG~v~T~~-----~~~----~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~itG  242 (262)
T 3ksu_A          172 TRAASKELMKQQISVNAIAPGPMDTSF-----FYG----QETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTDGWWING  242 (262)
T ss_dssp             HHHHHHHTTTTTCEEEEEEECCCCTHH-----HHT----CC------------CCCCSCCGGGTHHHHHHHHTTTTTCCS
T ss_pred             HHHHHHHHHHcCcEEEEEeeCCCcCcc-----ccc----cCchHHHHHHHhcCcccCCCCHHHHHHHHHHHcCCCCCccC
Confidence            64       247999999999886641     100    0000000011111122356789999999999998622 368


Q ss_pred             ceEEecCCccccH
Q 021331          204 QVFNISGEKYVTF  216 (314)
Q Consensus       204 ~~~~i~~~~~~s~  216 (314)
                      +.+++.|+.....
T Consensus       243 ~~i~vdGg~~~~~  255 (262)
T 3ksu_A          243 QTIFANGGYTTRE  255 (262)
T ss_dssp             CEEEESTTCCCC-
T ss_pred             CEEEECCCccCCC
Confidence            9999999875543

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.64  E-value=7.7e-16  Score=128.39  Aligned_cols=197  Identities=16%  Similarity=0.215  Sum_probs=131.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC---------
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---------   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~---------   71 (314)
                      |||+|+||.++++.|+++|++|+++.++........    ...+.....++.++.+|++|.++++.+++..         
T Consensus        13 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   88 (255)
T 3icc_A           13 TGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEET----VYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTG   88 (255)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHH----HHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHHHS
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHH----HHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhccccc
Confidence            899999999999999999999998755443211111    0122222457889999999998888777532         


Q ss_pred             --CccEEEEcCCCCcc--------------------cHHHHHHhCC----CCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           72 --GFDVVYDINGREAD--------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        72 --~~d~vi~~a~~~~~--------------------~~~~~~~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                        .+|++||+||....                    ++.++++++.    +..++|++||...+...   |....|+.+|
T Consensus        89 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~---~~~~~Y~asK  165 (255)
T 3icc_A           89 STKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL---PDFIAYSMTK  165 (255)
T ss_dssp             SSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCC---TTBHHHHHHH
T ss_pred             CCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCC---CCcchhHHhH
Confidence              39999999987321                    2233444433    34589999997665332   2223689999


Q ss_pred             hhHHHHHH-------hcCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          126 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       126 ~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      ...+.+.+       ..++++..++||.+..+...... ............+         ...+.+++|+|++++.++.
T Consensus       166 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s  236 (255)
T 3icc_A          166 GAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISA---------FNRLGEVEDIADTAAFLAS  236 (255)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTST---------TSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCC---------cCCCCCHHHHHHHHHHHhC
Confidence            88877653       35899999999999887432211 1111122222221         1246679999999999987


Q ss_pred             CCc--cCCceEEecCCcc
Q 021331          198 NEK--ASRQVFNISGEKY  213 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~~  213 (314)
                      ...  ..|+++++.+|..
T Consensus       237 ~~~~~~tG~~i~vdgG~~  254 (255)
T 3icc_A          237 PDSRWVTGQLIDVSGGSC  254 (255)
T ss_dssp             GGGTTCCSCEEEESSSTT
T ss_pred             cccCCccCCEEEecCCee
Confidence            532  3789999998864

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.63  E-value=6.9e-16  Score=129.23  Aligned_cols=194  Identities=14%  Similarity=0.218  Sum_probs=126.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   87 (262)
T 1zem_A           13 TGAGGNIGLATALRLAEEGTAIALLDMNREALEKAE-----ASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDF   87 (262)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865422110     111112356889999999999888777643     7999


Q ss_pred             EEEcCCCC-cc--------------------cHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGRE-AD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~-~~--------------------~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||.. ..                    ++.+++++    +.  +..++|++||...+...   +....|+.+|...
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asK~a~  164 (262)
T 1zem_A           88 LFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP---PNMAAYGTSKGAI  164 (262)
T ss_dssp             EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC---TTBHHHHHHHHHH
T ss_pred             EEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC---CCCchHHHHHHHH
Confidence            99999864 11                    11223333    32  45799999997665322   2223689999777


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCc------------h--hHH-HHHHHHcCCCeecCCCCCceeeeeeHH
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNP------------V--EEW-FFHRLKAGRPIPIPGSGIQVTQLGHVK  186 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~------------~--~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~  186 (314)
                      +.+.+       .+++++++++||.+..+.....            .  ... ....+....+         ...+.+.+
T Consensus       165 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~  235 (262)
T 1zem_A          165 IALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVP---------MRRYGDIN  235 (262)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTST---------TSSCBCGG
T ss_pred             HHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCC---------CCCCcCHH
Confidence            66653       3589999999998876521000            0  000 1111111111         12367889


Q ss_pred             HHHHHHHHHhcCCc--cCCceEEecCC
Q 021331          187 DLARAFVQVLGNEK--ASRQVFNISGE  211 (314)
Q Consensus       187 D~a~~~~~~l~~~~--~~~~~~~i~~~  211 (314)
                      |+|++++.++....  ..|..+.+.||
T Consensus       236 dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          236 EIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             GSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            99999999997532  36788888764

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.63  E-value=4.3e-16  Score=127.29  Aligned_cols=178  Identities=16%  Similarity=0.137  Sum_probs=126.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-CccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi~~   79 (314)
                      |||+|+||.++++.|+++|++|++++|+..                         +|++|++++++++++. ++|++||+
T Consensus        12 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------------------~D~~~~~~v~~~~~~~g~id~lv~n   66 (223)
T 3uce_A           12 LGGTSGIGAELAKQLESEHTIVHVASRQTG-------------------------LDISDEKSVYHYFETIGAFDHLIVT   66 (223)
T ss_dssp             ETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------------------CCTTCHHHHHHHHHHHCSEEEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------------------cCCCCHHHHHHHHHHhCCCCEEEEC
Confidence            799999999999999999999999988642                         6999999999888754 68999999


Q ss_pred             CCCC-c--------------------ccHHHHHHhCC----CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHH-
Q 021331           80 NGRE-A--------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLE-  133 (314)
Q Consensus        80 a~~~-~--------------------~~~~~~~~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~-  133 (314)
                      ||.. .                    .++..+++++.    ...++|++||...+...   +....|..+|...+.+.+ 
T Consensus        67 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---~~~~~Y~asK~a~~~~~~~  143 (223)
T 3uce_A           67 AGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVV---ANTYVKAAINAAIEATTKV  143 (223)
T ss_dssp             CCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCC---TTCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCC---CCchHHHHHHHHHHHHHHH
Confidence            9964 1                    11223344332    33589999997765432   222368999988877764 


Q ss_pred             ---hcC-CceEEEecCeeeCCCCCCch---hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceE
Q 021331          134 ---SKG-VNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  206 (314)
Q Consensus       134 ---~~~-~~~~ilR~~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~  206 (314)
                         +.+ +++..++||.+.++......   ...+........+         ...+.+++|+|++++.+++.....|+++
T Consensus       144 la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dvA~~~~~l~~~~~~tG~~i  214 (223)
T 3uce_A          144 LAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLP---------VGKVGEASDIAMAYLFAIQNSYMTGTVI  214 (223)
T ss_dssp             HHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHST---------TCSCBCHHHHHHHHHHHHHCTTCCSCEE
T ss_pred             HHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCC---------CCCccCHHHHHHHHHHHccCCCCCCcEE
Confidence               333 89999999999887432111   1112222222222         1246789999999999998765679999


Q ss_pred             EecCCcccc
Q 021331          207 NISGEKYVT  215 (314)
Q Consensus       207 ~i~~~~~~s  215 (314)
                      ++.+|..++
T Consensus       215 ~vdgG~~~s  223 (223)
T 3uce_A          215 DVDGGALLG  223 (223)
T ss_dssp             EESTTGGGC
T ss_pred             EecCCeecC
Confidence            999987653

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.63  E-value=1.9e-16  Score=131.40  Aligned_cols=189  Identities=14%  Similarity=0.109  Sum_probs=130.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......        .+...++.++.+|++|+++++++++..     ++|+
T Consensus        12 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   83 (247)
T 3rwb_A           12 TGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAA--------ASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI   83 (247)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH--------HHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            799999999999999999999999999875532111        111357889999999999888887643     6999


Q ss_pred             EEEcCCCCcc--------------------cHHHHHHh----CC--C-CCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~~~~~~~----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||....                    ++.++.++    +.  + ..++|++||...+....   ....|..+|...
T Consensus        84 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~asKaa~  160 (247)
T 3rwb_A           84 LVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP---NMAAYVAAKGGV  160 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT---TCHHHHHHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC---CchhhHHHHHHH
Confidence            9999996321                    12223333    43  3 57999999976654322   222689999777


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCC---chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      +.+.+       .+++++..++||.|..+....   .....+....   .+         ...+.+.+|+|++++.++..
T Consensus       161 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~---~~---------~~r~~~pedva~~v~~L~s~  228 (247)
T 3rwb_A          161 IGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML---QA---------MKGKGQPEHIADVVSFLASD  228 (247)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH---SS---------SCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc---cc---------cCCCcCHHHHHHHHHHHhCc
Confidence            76653       368999999999988752110   0000111100   11         12356789999999999986


Q ss_pred             Cc--cCCceEEecCCc
Q 021331          199 EK--ASRQVFNISGEK  212 (314)
Q Consensus       199 ~~--~~~~~~~i~~~~  212 (314)
                      ..  ..|+++++.+|.
T Consensus       229 ~~~~itG~~i~vdGG~  244 (247)
T 3rwb_A          229 DARWITGQTLNVDAGM  244 (247)
T ss_dssp             GGTTCCSCEEEESTTS
T ss_pred             cccCCCCCEEEECCCc
Confidence            43  378999999885

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.63  E-value=1.4e-15  Score=127.85  Aligned_cols=179  Identities=18%  Similarity=0.170  Sum_probs=116.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......        .+...++.++.+|++|++++.++++..     ++|+
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           34 TGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETA--------AEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999865532111        111257889999999999988888644     7999


Q ss_pred             EEEcCCCCcc---------------------c----HHHHHHhCC--C--CCcEEEEeeceeeccCCCCCccCccccchh
Q 021331           76 VYDINGREAD---------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCESRHKGKL  126 (314)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~~~~~~~--~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~  126 (314)
                      +||+||....                     +    ++.++..+.  +  ..++|++||...+...   +....|+.+|.
T Consensus       106 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~---~~~~~Y~asKa  182 (272)
T 4dyv_A          106 LFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPR---PYSAPYTATKH  182 (272)
T ss_dssp             EEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCC---TTCHHHHHHHH
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCC---CCchHHHHHHH
Confidence            9999987321                     1    222333333  2  4689999997665322   22236999998


Q ss_pred             hHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          127 NTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       127 ~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      ..+.+.+       ..++++..++||.|..+...     .+..    .....  ........+.+++|+|++++.+++.+
T Consensus       183 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~-----~~~~----~~~~~--~~~~~~~~~~~pedvA~~v~fL~s~~  251 (272)
T 4dyv_A          183 AITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQ-----KMKA----GVPQA--DLSIKVEPVMDVAHVASAVVYMASLP  251 (272)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------------------CHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHhCccCEEEEEEEECcccChhhh-----hhcc----cchhh--hhcccccCCCCHHHHHHHHHHHhCCC
Confidence            8887763       35899999999998876321     1100    00000  00112234789999999999999976


Q ss_pred             cc
Q 021331          200 KA  201 (314)
Q Consensus       200 ~~  201 (314)
                      ..
T Consensus       252 ~~  253 (272)
T 4dyv_A          252 LD  253 (272)
T ss_dssp             TT
T ss_pred             Cc
Confidence            54

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.63  E-value=1.2e-15  Score=131.72  Aligned_cols=195  Identities=10%  Similarity=0.033  Sum_probs=132.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEE-cCCcccccCCCCCCchhhh-hccCceEEEEecCCChh----------------
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYD----------------   62 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~----------------   62 (314)
                      |||+|+||.++++.|+++|++|++++ |+.+......     ..+. ....++.++.+|++|++                
T Consensus        52 TGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~  126 (328)
T 2qhx_A           52 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS-----ATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF  126 (328)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHH
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhhcCCeEEEEEeeCCCchhccccccccccccccH
Confidence            89999999999999999999999999 8764422110     0111 11256889999999998                


Q ss_pred             -hHHHhhhcC-----CccEEEEcCCCCc-----------------------cc-----------H----HHHHHhCC--C
Q 021331           63 -FVKSSLSAK-----GFDVVYDINGREA-----------------------DE-----------V----EPILDALP--N   96 (314)
Q Consensus        63 -~l~~~~~~~-----~~d~vi~~a~~~~-----------------------~~-----------~----~~~~~~~~--~   96 (314)
                       ++.++++..     ++|++||+||...                       ..           +    +.++..+.  +
T Consensus       127 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~  206 (328)
T 2qhx_A          127 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  206 (328)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence             888877643     7999999998631                       00           1    12222232  3


Q ss_pred             ------CCcEEEEeeceeeccCCCCCccCccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHH
Q 021331           97 ------LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR  163 (314)
Q Consensus        97 ------~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~  163 (314)
                            ..+||++||...+...   +....|+.+|...+.+.+       ..++.+++|+||.|.++. ..  .......
T Consensus       207 ~~~~~~~g~IV~isS~~~~~~~---~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~--~~~~~~~  280 (328)
T 2qhx_A          207 AKHRGTNYSIINMVDAMTNQPL---LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DM--PPAVWEG  280 (328)
T ss_dssp             GGGSCSCEEEEEECCTTTTSCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CS--CHHHHHH
T ss_pred             CcCCCCCcEEEEECchhhccCC---CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cc--cHHHHHH
Confidence                  5789999997665322   222268999988877764       358999999999999885 21  2233333


Q ss_pred             HHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC--ccCCceEEecCCccc
Q 021331          164 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  214 (314)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~--~~~~~~~~i~~~~~~  214 (314)
                      +....+  + +     ..+.+.+|+|++++.++...  ...|.++++.+|..+
T Consensus       281 ~~~~~p--~-~-----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          281 HRSKVP--L-Y-----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             HHTTCT--T-T-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhhCC--C-C-----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence            332211  1 1     03667999999999999753  236889999988654

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.63  E-value=2.5e-15  Score=123.48  Aligned_cols=187  Identities=17%  Similarity=0.164  Sum_probs=130.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++++|+.+......         +...++.++.+|++|++++++++++.     ++|+
T Consensus         8 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~---------~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi   78 (247)
T 3ged_A            8 TGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA---------KERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV   78 (247)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---------TTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---------HhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999876533211         12367889999999998888877532     6999


Q ss_pred             EEEcCCCCccc------------------------HHHHHHhCC-CCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           76 VYDINGREADE------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        76 vi~~a~~~~~~------------------------~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      +||+||.....                        ++.++..+. +..++|++||...+..   .|....|..+|.....
T Consensus        79 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~---~~~~~~Y~asKaal~~  155 (247)
T 3ged_A           79 LVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQS---EPDSEAYASAKGGIVA  155 (247)
T ss_dssp             EEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSC---CTTCHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccC---CCCCHHHHHHHHHHHH
Confidence            99999874221                        233333443 4479999999765432   2222368888877766


Q ss_pred             HHH------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCc
Q 021331          131 VLE------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  204 (314)
Q Consensus       131 ~~~------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~  204 (314)
                      +.+      ..++++..|.||.+-.+.... +    .......-++         ..+...+|+|.+++.+++...-.|+
T Consensus       156 ltk~lA~ela~~IrVN~I~PG~i~t~~~~~-~----~~~~~~~~Pl---------~R~g~pediA~~v~fL~s~~~iTG~  221 (247)
T 3ged_A          156 LTHALAMSLGPDVLVNCIAPGWINVTEQQE-F----TQEDCAAIPA---------GKVGTPKDISNMVLFLCQQDFITGE  221 (247)
T ss_dssp             HHHHHHHHHTTTSEEEEEEECSBCCCC----C----CHHHHHTSTT---------SSCBCHHHHHHHHHHHHHCSSCCSC
T ss_pred             HHHHHHHHHCCCCEEEEEecCcCCCCCcHH-H----HHHHHhcCCC---------CCCcCHHHHHHHHHHHHhCCCCCCC
Confidence            653      137999999999987663221 1    1222222221         1355689999999999986555889


Q ss_pred             eEEecCCcc
Q 021331          205 VFNISGEKY  213 (314)
Q Consensus       205 ~~~i~~~~~  213 (314)
                      ++.+.||..
T Consensus       222 ~i~VDGG~s  230 (247)
T 3ged_A          222 TIIVDGGMS  230 (247)
T ss_dssp             EEEESTTGG
T ss_pred             eEEECcCHH
Confidence            999999853

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.63  E-value=6.6e-15  Score=122.17  Aligned_cols=189  Identities=14%  Similarity=0.119  Sum_probs=124.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......        .+...++.++.+|++|+++++++++..     ++|+
T Consensus         6 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   77 (248)
T 3asu_A            6 TGATAGFGECITRRFIQQGHKVIATGRRQERLQELK--------DELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI   77 (248)
T ss_dssp             TTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            899999999999999999999999999865422110        011246889999999999999888753     6899


Q ss_pred             EEEcCCCCc---------------------cc----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREA---------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~---------------------~~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||...                     .+    ++.++..+.  +..++|++||...+...   +....|+.+|...
T Consensus        78 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---~~~~~Y~asKaa~  154 (248)
T 3asu_A           78 LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY---AGGNVYGATKAFV  154 (248)
T ss_dssp             EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC---TTCHHHHHHHHHH
T ss_pred             EEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCC---CCCchHHHHHHHH
Confidence            999998631                     01    122333332  56799999997665322   2223699999988


Q ss_pred             HHHHH-------hcCCceEEEecCeeeC-CCCCCchhHHHHHHHHcCCCe-ecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYG-PLNYNPVEEWFFHRLKAGRPI-PIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      +.+.+       ..++++++++||.|.| +.....+ .   .   ..... ...    ....+++.+|+|++++.++..+
T Consensus       155 ~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~-~---~---~~~~~~~~~----~~~~~~~p~dvA~~v~~l~s~~  223 (248)
T 3asu_A          155 RQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRF-K---G---DDGKAEKTY----QNTVALTPEDVSEAVWWVSTLP  223 (248)
T ss_dssp             HHHHHHHHHHTTTSCCEEEEEEECSBCC---------------------------------CCBCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcc-c---C---chHHHHHHH----hccCCCCHHHHHHHHHHHhcCC
Confidence            88764       2479999999999984 5211000 0   0   00000 000    0123468999999999999864


Q ss_pred             cc-CCceEEecCC
Q 021331          200 KA-SRQVFNISGE  211 (314)
Q Consensus       200 ~~-~~~~~~i~~~  211 (314)
                      .. .+..+.+.+.
T Consensus       224 ~~~~g~~i~v~~~  236 (248)
T 3asu_A          224 AHVNINTLEMMPV  236 (248)
T ss_dssp             TTCCCCEEEECCT
T ss_pred             ccceeeEEEEccc
Confidence            33 5566666544

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.62  E-value=2.5e-15  Score=127.54  Aligned_cols=194  Identities=13%  Similarity=0.117  Sum_probs=130.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCC-cccccCCCCCCchhhh-hccCceEEEEecCCC----hhhHHHhhhcC---
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFA-EFSSKILHLKGDRKD----YDFVKSSLSAK---   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d----~~~l~~~~~~~---   71 (314)
                      |||+|+||.++++.|+++|++|++++|+. +......     ..+. ....++.++.+|++|    ++++.++++..   
T Consensus        29 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~  103 (288)
T 2x9g_A           29 TGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLA-----DELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRA  103 (288)
T ss_dssp             TTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHH-----HHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHH
T ss_pred             eCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH-----HHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHh
Confidence            89999999999999999999999999987 4321110     0111 113568899999999    88888777532   


Q ss_pred             --CccEEEEcCCCCc----------c-----c-------------------HHHHHHhCC--C------CCcEEEEeece
Q 021331           72 --GFDVVYDINGREA----------D-----E-------------------VEPILDALP--N------LEQFIYCSSAG  107 (314)
Q Consensus        72 --~~d~vi~~a~~~~----------~-----~-------------------~~~~~~~~~--~------~~~~i~~Ss~~  107 (314)
                        ++|++||+||...          .     .                   ++.++..+.  +      ..++|++||..
T Consensus       104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~  183 (288)
T 2x9g_A          104 FGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAM  183 (288)
T ss_dssp             HSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTT
T ss_pred             cCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEeccc
Confidence              6999999998531          1     1                   122233333  2      46899999977


Q ss_pred             eeccCCCCCccCccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCcee
Q 021331          108 VYLKSDLLPHCESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVT  180 (314)
Q Consensus       108 v~~~~~~~~~~e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (314)
                      .+...   +....|+.+|...+.+.+       ..++++++++||.++++. ..  ............++         .
T Consensus       184 ~~~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~--~~~~~~~~~~~~p~---------~  248 (288)
T 2x9g_A          184 VDQPC---MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AM--GEEEKDKWRRKVPL---------G  248 (288)
T ss_dssp             TTSCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TS--CHHHHHHHHHTCTT---------T
T ss_pred             ccCCC---CCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-cc--ChHHHHHHHhhCCC---------C
Confidence            65322   222269999987776653       358999999999999985 21  12222222222111         1


Q ss_pred             ee-eeHHHHHHHHHHHhcCC--ccCCceEEecCCccc
Q 021331          181 QL-GHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  214 (314)
Q Consensus       181 ~~-i~~~D~a~~~~~~l~~~--~~~~~~~~i~~~~~~  214 (314)
                      .+ .+.+|+|++++.++...  ...|.++++.+|..+
T Consensus       249 r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  285 (288)
T 2x9g_A          249 RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL  285 (288)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhh
Confidence            24 67899999999999753  236889999988643

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.62  E-value=1.6e-15  Score=124.81  Aligned_cols=187  Identities=18%  Similarity=0.111  Sum_probs=127.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhh-hccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......     .+. ....++.++.+|++|++++.++++..     ++|
T Consensus         8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   82 (235)
T 3l77_A            8 TGASRGIGEAIARALARDGYALALGARSVDRLEKIAH-----ELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVD   82 (235)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCS
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            7999999999999999999999999998754321110     111 12357899999999999999888643     799


Q ss_pred             EEEEcCCCCc--------------------ccHHHHHHh----CC-CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           75 VVYDINGREA--------------------DEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~~~~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      ++||+||...                    .++.+++++    +. +..++|++||...+..   .|....|..+|...+
T Consensus        83 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~---~~~~~~Y~~sKaa~~  159 (235)
T 3l77_A           83 VVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARL---IPYGGGYVSTKWAAR  159 (235)
T ss_dssp             EEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSC---CTTCHHHHHHHHHHH
T ss_pred             EEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhccc---CCCcchHHHHHHHHH
Confidence            9999998732                    112233333    32 3456777777544322   222236899999888


Q ss_pred             HHHHh-----cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCcc--C
Q 021331          130 SVLES-----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA--S  202 (314)
Q Consensus       130 ~~~~~-----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~--~  202 (314)
                      .+.+.     .++++..++||.+..+.....            .     . ......+++.+|+|++++.+++++..  .
T Consensus       160 ~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~------------~-----~-~~~~~~~~~p~dva~~v~~l~~~~~~~~~  221 (235)
T 3l77_A          160 ALVRTFQIENPDVRFFELRPGAVDTYFGGSK------------P-----G-KPKEKGYLKPDEIAEAVRCLLKLPKDVRV  221 (235)
T ss_dssp             HHHHHHHHHCTTSEEEEEEECSBSSSTTTCC------------S-----C-CCGGGTCBCHHHHHHHHHHHHTSCTTCCC
T ss_pred             HHHHHHhhcCCCeEEEEEeCCcccccccccc------------C-----C-cccccCCCCHHHHHHHHHHHHcCCCCCcc
Confidence            87653     589999999998876521110            0     0 01112567899999999999988553  5


Q ss_pred             CceEEecCCcc
Q 021331          203 RQVFNISGEKY  213 (314)
Q Consensus       203 ~~~~~i~~~~~  213 (314)
                      +++....+++.
T Consensus       222 ~~~~~~~~~~~  232 (235)
T 3l77_A          222 EELMLRSVYQR  232 (235)
T ss_dssp             CEEEECCTTSC
T ss_pred             ceEEEeecccC
Confidence            56666665543

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.62  E-value=2.3e-15  Score=126.59  Aligned_cols=192  Identities=15%  Similarity=0.111  Sum_probs=124.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......     .+.. ..++.++.+|++|++++.++++..     ++|+
T Consensus        27 TGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  100 (272)
T 2nwq_A           27 TGATSGFGEACARRFAEAGWSLVLTGRREERLQALAG-----ELSA-KTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG  100 (272)
T ss_dssp             SSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHTT-TSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----Hhhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            8999999999999999999999999998654321110     1110 136889999999999999988743     4799


Q ss_pred             EEEcCCCCcc---------------------c----HHHHHHhCC--CCC-cEEEEeeceeeccCCCCCccCccccchhh
Q 021331           76 VYDINGREAD---------------------E----VEPILDALP--NLE-QFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~~~~~~~--~~~-~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      +||+||....                     +    ++.++..+.  +.. ++|++||...+...   +....|+.+|..
T Consensus       101 lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~---~~~~~Y~asKaa  177 (272)
T 2nwq_A          101 LINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPY---PGSHVYGGTKAF  177 (272)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCC---TTCHHHHHHHHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCC---CCCchHHHHHHH
Confidence            9999986421                     1    233444443  556 99999997665322   222269999998


Q ss_pred             HHHHHHh-------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          128 TESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       128 ~e~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.+.+.       .++++++++||.+.++...... .   ..  .........    ...++..+|+|++++.++..+.
T Consensus       178 ~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~-~---~~--~~~~~~~~~----~~~~~~pedvA~~v~~l~s~~~  247 (272)
T 2nwq_A          178 VEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRF-G---GD--QARYDKTYA----GAHPIQPEDIAETIFWIMNQPA  247 (272)
T ss_dssp             HHHHHHHHHTTCTTSCCEEEEEEECSBC------------------------------CCCCBCHHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhccc-c---cc--hHHHHHhhc----cCCCCCHHHHHHHHHHHhCCCc
Confidence            8887642       5799999999999877321100 0   00  000000000    0125789999999999998643


Q ss_pred             c-CCceEEecCC
Q 021331          201 A-SRQVFNISGE  211 (314)
Q Consensus       201 ~-~~~~~~i~~~  211 (314)
                      . .+..+.+.++
T Consensus       248 ~~~g~~i~v~~~  259 (272)
T 2nwq_A          248 HLNINSLEIMPV  259 (272)
T ss_dssp             TEEEEEEEEEET
T ss_pred             cCccceEEEeec
Confidence            2 4556666654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.62  E-value=9.4e-16  Score=126.36  Aligned_cols=176  Identities=14%  Similarity=0.142  Sum_probs=121.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-------CCc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-------~~~   73 (314)
                      |||+|+||.++++.|+++|++|++++|+.+...               ....++.+|++|++++.++++.       -++
T Consensus         9 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~i   73 (236)
T 1ooe_A            9 YGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV   73 (236)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEecCccccc---------------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            799999999999999999999999999876521               2356778999999888877653       279


Q ss_pred             cEEEEcCCCCc-----c----------------cHHHHHHh----CCCCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           74 DVVYDINGREA-----D----------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        74 d~vi~~a~~~~-----~----------------~~~~~~~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      |+|||+||...     .                ++.++.++    +....++|++||...+...   +....|..+|...
T Consensus        74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~~sK~a~  150 (236)
T 1ooe_A           74 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT---PSMIGYGMAKAAV  150 (236)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC---TTBHHHHHHHHHH
T ss_pred             CEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCC---CCcHHHHHHHHHH
Confidence            99999998531     1                11222233    3233589999997765322   2223689999888


Q ss_pred             HHHHH---------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          129 ESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       129 e~~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      +.+.+         ..++++++++||.+.++     +.    .......         ....+++.+|+|++++.++..+
T Consensus       151 ~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~-----~~----~~~~~~~---------~~~~~~~~~dvA~~i~~~l~s~  212 (236)
T 1ooe_A          151 HHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP-----MN----RKWMPNA---------DHSSWTPLSFISEHLLKWTTET  212 (236)
T ss_dssp             HHHHHHHHSTTSSCCTTCEEEEEEESCBCCH-----HH----HHHSTTC---------CGGGCBCHHHHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHhcccCCCeEEEEEecCcccCc-----ch----hhcCCCc---------cccccCCHHHHHHHHHHHHcCC
Confidence            87763         23599999999998876     21    1111111         1123567899999999777332


Q ss_pred             ---ccCCceEEecCCc
Q 021331          200 ---KASRQVFNISGEK  212 (314)
Q Consensus       200 ---~~~~~~~~i~~~~  212 (314)
                         ...|..+.+.++.
T Consensus       213 ~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          213 SSRPSSGALLKITTEN  228 (236)
T ss_dssp             GGCCCTTCEEEEEEET
T ss_pred             CcccccccEEEEecCC
Confidence               2258888888764

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.62  E-value=1.3e-16  Score=134.48  Aligned_cols=172  Identities=15%  Similarity=0.166  Sum_probs=120.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.+...++.++.+|++|++++.++++..     ++|+
T Consensus        37 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  111 (272)
T 1yb1_A           37 TGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETA-----AKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI  111 (272)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHH-----HHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence            799999999999999999999999999865422111     112222357899999999999888877643     6899


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      |||+||....                    +    ++.++..+.  +..+||++||...+...   +....|+.+|...+
T Consensus       112 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---~~~~~Y~~sK~a~~  188 (272)
T 1yb1_A          112 LVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV---PFLLAYCSSKFAAV  188 (272)
T ss_dssp             EEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH---HHHHHHHHHHHHHH
T ss_pred             EEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC---CCchhHHHHHHHHH
Confidence            9999986321                    1    223333333  56799999998765321   11226899998887


Q ss_pred             HHHH----------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          130 SVLE----------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       130 ~~~~----------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      .+.+          ..+++++++||+.+.++.....              .      .....+++.+|+|++++.++..+
T Consensus       189 ~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~--------------~------~~~~~~~~~~dva~~i~~~~~~~  248 (272)
T 1yb1_A          189 GFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP--------------S------TSLGPTLEPEEVVNRLMHGILTE  248 (272)
T ss_dssp             HHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT--------------H------HHHCCCCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc--------------c------ccccCCCCHHHHHHHHHHHHHcC
Confidence            7663          2379999999999887732110              0      01124678999999999999875


Q ss_pred             c
Q 021331          200 K  200 (314)
Q Consensus       200 ~  200 (314)
                      .
T Consensus       249 ~  249 (272)
T 1yb1_A          249 Q  249 (272)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.62  E-value=6e-16  Score=133.19  Aligned_cols=192  Identities=10%  Similarity=0.075  Sum_probs=116.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhcc--CceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS--SKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......     .+....  ..+.++.+|++|++++.++++..     ++
T Consensus        14 TGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (319)
T 3ioy_A           14 TGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALA-----TLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPV   88 (319)
T ss_dssp             ETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCE
T ss_pred             cCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999998765321110     111111  27899999999999888887643     68


Q ss_pred             cEEEEcCCCCc--------------------ccHHHHHHhCC------------CCCcEEEEeeceeeccCCCCCccCcc
Q 021331           74 DVVYDINGREA--------------------DEVEPILDALP------------NLEQFIYCSSAGVYLKSDLLPHCESR  121 (314)
Q Consensus        74 d~vi~~a~~~~--------------------~~~~~~~~~~~------------~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (314)
                      |+|||+||...                    .++.++++++.            +..+||++||...+...   |....|
T Consensus        89 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~---~~~~~Y  165 (319)
T 3ioy_A           89 SILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA---GSPGIY  165 (319)
T ss_dssp             EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC---SSSHHH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC---CCCHHH
Confidence            99999999631                    12333333322            24579999997765432   222369


Q ss_pred             ccchhhHHHHH-------HhcCCceEEEecCeeeCCCCCCc-hhHHHHHHHH-cCCCeecCCCCCceeeeeeHHHHHHHH
Q 021331          122 HKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLK-AGRPIPIPGSGIQVTQLGHVKDLARAF  192 (314)
Q Consensus       122 ~~~k~~~e~~~-------~~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~D~a~~~  192 (314)
                      ..+|...+.+.       ...++++++++||.|.++..... .....+.... ......+..-.......++++|+|+++
T Consensus       166 ~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  245 (319)
T 3ioy_A          166 NTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARV  245 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHHHHH
Confidence            99999544443       24589999999999988742211 0000000000 000000000001111227899999999


Q ss_pred             HHHhcCCc
Q 021331          193 VQVLGNEK  200 (314)
Q Consensus       193 ~~~l~~~~  200 (314)
                      +.+++++.
T Consensus       246 ~~al~~~~  253 (319)
T 3ioy_A          246 IEAMKANR  253 (319)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHHcCC
Confidence            99998753

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.62  E-value=2.5e-15  Score=126.72  Aligned_cols=195  Identities=12%  Similarity=0.069  Sum_probs=130.5

Q ss_pred             CCcc--cccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+  |+||.++++.|+++|++|++++|+.+. ...+     ..+.....++.++.+|++|++++.++++..     ++
T Consensus        12 TGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~-~~~~-----~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   85 (275)
T 2pd4_A           12 VGVANNKSIAYGIAQSCFNQGATLAFTYLNESL-EKRV-----RPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSL   85 (275)
T ss_dssp             ECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTT-HHHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH-HHHH-----HHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            7998  999999999999999999999998641 1000     111111134788999999999888887643     68


Q ss_pred             cEEEEcCCCCcc------------------------cHHHHHHhCC----CCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           74 DVVYDINGREAD------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~~~~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      |++||+||....                        ++.++++++.    ...++|++||...+...   +....|+.+|
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asK  162 (275)
T 2pd4_A           86 DFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM---AHYNVMGLAK  162 (275)
T ss_dssp             EEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC---TTCHHHHHHH
T ss_pred             CEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCC---CCchhhHHHH
Confidence            999999986421                        1223334433    23589999996654322   2222589999


Q ss_pred             hhHHHHHH-------hcCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          126 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       126 ~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      ...+.+.+       ..++++++++||.|.++.... .........+....++         ..+.+.+|+|++++.++.
T Consensus       163 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~~~~~p~dva~~~~~l~s  233 (275)
T 2pd4_A          163 AALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL---------RKNVSLEEVGNAGMYLLS  233 (275)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCc---------CCCCCHHHHHHHHHHHhC
Confidence            88877764       348999999999999874221 1112222222221111         135678999999999997


Q ss_pred             CCc--cCCceEEecCCcc
Q 021331          198 NEK--ASRQVFNISGEKY  213 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~~  213 (314)
                      ...  ..|..+++.++..
T Consensus       234 ~~~~~~tG~~~~vdgg~~  251 (275)
T 2pd4_A          234 SLSSGVSGEVHFVDAGYH  251 (275)
T ss_dssp             GGGTTCCSCEEEESTTGG
T ss_pred             ccccCCCCCEEEECCCcc
Confidence            532  3678999988854

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.62  E-value=3.1e-15  Score=123.68  Aligned_cols=176  Identities=12%  Similarity=0.081  Sum_probs=123.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-------CCc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-------~~~   73 (314)
                      |||+|+||.++++.|+++|++|++++|+.+...               ....++.+|++|++++.++++.       -++
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~i   77 (241)
T 1dhr_A           13 YGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   77 (241)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc---------------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            799999999999999999999999999875521               2356778999999888887764       279


Q ss_pred             cEEEEcCCCCc-----c----------------cHHHHHHh----CCCCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           74 DVVYDINGREA-----D----------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        74 d~vi~~a~~~~-----~----------------~~~~~~~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      |++||+||...     .                ++..+.++    +....++|++||...+...   +....|..+|...
T Consensus        78 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asK~a~  154 (241)
T 1dhr_A           78 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT---PGMIGYGMAKGAV  154 (241)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC---TTBHHHHHHHHHH
T ss_pred             CEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCC---CCchHHHHHHHHH
Confidence            99999998531     1                11222232    2223589999997765432   2223689999988


Q ss_pred             HHHHH---------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          129 ESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       129 e~~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      +.+.+         ..++++++++||.+-.+     +.    .......         ....+++.+|+|++++.+++..
T Consensus       155 ~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~-----~~----~~~~~~~---------~~~~~~~~~~vA~~v~~l~~~~  216 (241)
T 1dhr_A          155 HQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP-----MN----RKSMPEA---------DFSSWTPLEFLVETFHDWITGN  216 (241)
T ss_dssp             HHHHHHHTSTTSSCCTTCEEEEEEESCEECH-----HH----HHHSTTS---------CGGGSEEHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHhccCCCCeEEEEEecCcccCc-----cc----cccCcch---------hhccCCCHHHHHHHHHHHhcCC
Confidence            87763         34699999999988765     11    1111111         1123577899999999999764


Q ss_pred             c--cCCceEEecCCc
Q 021331          200 K--ASRQVFNISGEK  212 (314)
Q Consensus       200 ~--~~~~~~~i~~~~  212 (314)
                      .  ..|..+.+.++.
T Consensus       217 ~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          217 KRPNSGSLIQVVTTD  231 (241)
T ss_dssp             TCCCTTCEEEEEEET
T ss_pred             CcCccceEEEEeCCC
Confidence            3  367888887764

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.61  E-value=1.3e-15  Score=125.74  Aligned_cols=196  Identities=13%  Similarity=0.113  Sum_probs=134.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|.++|++|++++|+.+......     +++.+...++.++.+|++|++++++++++.     ++|+
T Consensus        13 TGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~-----~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDi   87 (254)
T 4fn4_A           13 TGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIV-----QELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDV   87 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999876532211     234444568999999999999888877542     6999


Q ss_pred             EEEcCCCCcc---------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||....                     +    ++.++..|.  +..++|++||...+..   .|....|..+|...
T Consensus        88 LVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~---~~~~~~Y~asKaal  164 (254)
T 4fn4_A           88 LCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRG---GFAGAPYTVAKHGL  164 (254)
T ss_dssp             EEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCS---SSSCHHHHHHHHHH
T ss_pred             EEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCC---CCCChHHHHHHHHH
Confidence            9999985311                     0    344555454  5579999999665322   12222688888877


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCch--hHHHHHHHHcC-CCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      ..+.+       .+|+++..|.||.|-.|......  .....+..... .++         ..+...+|+|.+++.++..
T Consensus       165 ~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~---------~R~g~pediA~~v~fLaSd  235 (254)
T 4fn4_A          165 IGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLS---------SRLAEPEDIANVIVFLASD  235 (254)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTC---------CCCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCC---------CCCcCHHHHHHHHHHHhCc
Confidence            66653       46899999999999776321110  11111111111 111         1245689999999999976


Q ss_pred             Cc--cCCceEEecCCcc
Q 021331          199 EK--ASRQVFNISGEKY  213 (314)
Q Consensus       199 ~~--~~~~~~~i~~~~~  213 (314)
                      ..  -.|+.+.+.||.+
T Consensus       236 ~a~~iTG~~i~VDGG~t  252 (254)
T 4fn4_A          236 EASFVNGDAVVVDGGLT  252 (254)
T ss_dssp             GGTTCCSCEEEESTTGG
T ss_pred             hhcCCcCCEEEeCCCcc
Confidence            33  3789999998854

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.61  E-value=1.3e-15  Score=126.77  Aligned_cols=191  Identities=13%  Similarity=0.107  Sum_probs=126.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecC--CChhhHHHhhhcC-----C
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDR--KDYDFVKSSLSAK-----G   72 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~--~d~~~l~~~~~~~-----~   72 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+... ..++.++.+|+  +|++++.++++..     +
T Consensus        18 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~   92 (252)
T 3f1l_A           18 TGASDGIGREAAMTYARYGATVILLGRNEEKLRQVA-----SHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPR   92 (252)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999875532111     111111 23788999999  8888888777643     6


Q ss_pred             ccEEEEcCCCCc---------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           73 FDVVYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        73 ~d~vi~~a~~~~---------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      +|++||+||...                     .++..+.++    +.  +..++|++||...+...   +....|+.+|
T Consensus        93 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---~~~~~Y~asK  169 (252)
T 3f1l_A           93 LDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGR---ANWGAYAASK  169 (252)
T ss_dssp             CSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCC---TTCHHHHHHH
T ss_pred             CCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCC---CCCchhHHHH
Confidence            999999998621                     112233333    33  55799999997654322   2222699999


Q ss_pred             hhHHHHHH----hc--CCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          126 LNTESVLE----SK--GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       126 ~~~e~~~~----~~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      ...+.+.+    ++  .+++..++||.+..+     +    ........         ....+.+.+|+|++++.++...
T Consensus       170 ~a~~~l~~~la~e~~~~irvn~v~PG~v~t~-----~----~~~~~~~~---------~~~~~~~p~dva~~~~~L~s~~  231 (252)
T 3f1l_A          170 FATEGMMQVLADEYQQRLRVNCINPGGTRTA-----M----RASAFPTE---------DPQKLKTPADIMPLYLWLMGDD  231 (252)
T ss_dssp             HHHHHHHHHHHHHTTTTCEEEEEECCSBSSH-----H----HHHHCTTC---------CGGGSBCTGGGHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHhcCCcEEEEEecCcccCc-----h----hhhhCCcc---------chhccCCHHHHHHHHHHHcCcc
Confidence            88887764    22  288889999887654     1    11111111         1123678899999999999864


Q ss_pred             c--cCCceEEecCCccccHH
Q 021331          200 K--ASRQVFNISGEKYVTFD  217 (314)
Q Consensus       200 ~--~~~~~~~i~~~~~~s~~  217 (314)
                      .  ..|+.+++.+|...++.
T Consensus       232 ~~~itG~~i~vdgG~~~~~~  251 (252)
T 3f1l_A          232 SRRKTGMTFDAQPGRKPGIS  251 (252)
T ss_dssp             GTTCCSCEEESSCC------
T ss_pred             ccCCCCCEEEeCCCcCCCCC
Confidence            3  36899999999876654

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.61  E-value=2.3e-15  Score=127.60  Aligned_cols=193  Identities=12%  Similarity=0.096  Sum_probs=130.8

Q ss_pred             CCcccccHHHHHHHHHHCCC---eEEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCChhhHHHhhhcC----
Q 021331            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK----   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~----   71 (314)
                      |||+|+||.++++.|+++|+   +|++++|+.+......     ..+...  ..++.++.+|++|+++++++++..    
T Consensus        39 TGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  113 (287)
T 3rku_A           39 TGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELK-----KTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEF  113 (287)
T ss_dssp             ESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-----HHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGG
T ss_pred             ecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHH-----HHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            79999999999999999987   9999999876532111     011111  246889999999999999988754    


Q ss_pred             -CccEEEEcCCCCc---------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCcccc
Q 021331           72 -GFDVVYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHK  123 (314)
Q Consensus        72 -~~d~vi~~a~~~~---------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (314)
                       ++|++||+||...                     .++.+++++    +.  +..++|++||...+...   +....|+.
T Consensus       114 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~---~~~~~Y~a  190 (287)
T 3rku_A          114 KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAY---PTGSIYCA  190 (287)
T ss_dssp             CSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC---TTCHHHHH
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCC---CCCchHHH
Confidence             6899999999632                     112233333    33  56799999997654322   22236999


Q ss_pred             chhhHHHHHH-------hcCCceEEEecCeeeCCCCC---CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHH
Q 021331          124 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  193 (314)
Q Consensus       124 ~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  193 (314)
                      +|...+.+.+       .+|+++..++||.|..+...   ...... ......        .    ..+++.+|+|++++
T Consensus       191 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~-~~~~~~--------~----~~p~~pedvA~~v~  257 (287)
T 3rku_A          191 SKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQ-AKNVYK--------D----TTPLMADDVADLIV  257 (287)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHH-HHHHHT--------T----SCCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHH-HHHhhc--------c----cCCCCHHHHHHHHH
Confidence            9988877763       25899999999999886210   000000 001110        0    12348999999999


Q ss_pred             HHhcCCcc--CCceEEecCCccc
Q 021331          194 QVLGNEKA--SRQVFNISGEKYV  214 (314)
Q Consensus       194 ~~l~~~~~--~~~~~~i~~~~~~  214 (314)
                      .++..+..  .++++.+.++++.
T Consensus       258 ~l~s~~~~~i~g~~i~v~~g~~~  280 (287)
T 3rku_A          258 YATSRKQNTVIADTLIFPTNQAS  280 (287)
T ss_dssp             HHHTSCTTEEEEEEEEEETTEEE
T ss_pred             HHhCCCCCeEecceEEeeCCCCC
Confidence            99987543  5788888888753

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.60  E-value=8.7e-15  Score=124.00  Aligned_cols=192  Identities=17%  Similarity=0.205  Sum_probs=127.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCC---chhhhhccCceEEEEecCCChhhHHHhhhcC-----C
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES---DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~   72 (314)
                      |||+|+||.++++.|+++|++|++++|+.+..... ....   ...+.....++.++.+|++|++++.+++++.     +
T Consensus        15 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   93 (285)
T 3sc4_A           15 SGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKL-PGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQFGG   93 (285)
T ss_dssp             ESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSS-CCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhh-hHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            79999999999999999999999999997653221 1111   1222333467999999999999988887654     7


Q ss_pred             ccEEEEcCCCCc--------------------ccH----HHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchh
Q 021331           73 FDVVYDINGREA--------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKL  126 (314)
Q Consensus        73 ~d~vi~~a~~~~--------------------~~~----~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~  126 (314)
                      +|++||+||...                    .++    +.++..+.  +..++|++||...+....  +....|+.+|.
T Consensus        94 id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~--~~~~~Y~asKa  171 (285)
T 3sc4_A           94 IDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKW--LRPTPYMMAKY  171 (285)
T ss_dssp             CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGG--SCSHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCC--CCCchHHHHHH
Confidence            999999999632                    112    22333344  456999999966543210  11126899998


Q ss_pred             hHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          127 NTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       127 ~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      ..+.+.+       ..|+++..++||.+...    ++    ......... +       ...+...+|+|++++.++..+
T Consensus       172 al~~~~~~la~e~~~~gI~vn~v~PG~~v~t----~~----~~~~~~~~~-~-------~~r~~~pedvA~~~~~l~s~~  235 (285)
T 3sc4_A          172 GMTLCALGIAEELRDAGIASNTLWPRTTVAT----AA----VQNLLGGDE-A-------MARSRKPEVYADAAYVVLNKP  235 (285)
T ss_dssp             HHHHHHHHHHHHTGGGTCEEEEEECSSCBCC----HH----HHHHHTSCC-C-------CTTCBCTHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEeCCCcccc----HH----HHhhccccc-c-------ccCCCCHHHHHHHHHHHhCCc
Confidence            8877753       36899999999843321    12    222222211 1       124567899999999999875


Q ss_pred             c-cCCceEEecCC
Q 021331          200 K-ASRQVFNISGE  211 (314)
Q Consensus       200 ~-~~~~~~~i~~~  211 (314)
                      . ..|+.+.+.++
T Consensus       236 ~~~tG~~i~~dgg  248 (285)
T 3sc4_A          236 SSYTGNTLLCEDV  248 (285)
T ss_dssp             TTCCSCEEEHHHH
T ss_pred             ccccceEEEEcCc
Confidence            3 35556655543

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.60  E-value=1.5e-15  Score=125.99  Aligned_cols=182  Identities=17%  Similarity=0.144  Sum_probs=120.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        13 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   87 (247)
T 2jah_A           13 TGASSGIGEATARALAAEGAAVAIAARRVEKLRALG-----DELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDI   87 (247)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111     111112356889999999999888877642     7999


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||...                    .++.++.++    +.  + .++|++||...+...   +....|+.+|...+
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~---~~~~~Y~asK~a~~  163 (247)
T 2jah_A           88 LVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNV---RNAAVYQATKFGVN  163 (247)
T ss_dssp             EEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCC---TTCHHHHHHHHHHH
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCC---CCCcHHHHHHHHHH
Confidence            999998632                    112233333    32  4 799999997655322   22236889998776


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.+       .+|+++++++||.+.++.......... ......    .++.    ..+.+.+|+|++++.++..+.
T Consensus       164 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~----~~~~----~~~~~pedvA~~v~~l~s~~~  232 (247)
T 2jah_A          164 AFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTAT-KEMYEQ----RISQ----IRKLQAQDIAEAVRYAVTAPH  232 (247)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHH-HHHHHH----HTTT----SCCBCHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhh-HHHHHh----cccc----cCCCCHHHHHHHHHHHhCCCc
Confidence            6653       358999999999998873211000111 111110    1111    115789999999999998643

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.60  E-value=2.6e-15  Score=125.05  Aligned_cols=194  Identities=13%  Similarity=0.134  Sum_probs=130.1

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+||.++++.|+++|  +.|++++|+.+......        ++...++.++.+|++|++++++++++.     ++
T Consensus         8 TGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            8 TGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLK--------EKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             CSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHH--------HHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHH--------HHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCc
Confidence            8999999999999999985  78888888865432111        111357899999999999988888643     79


Q ss_pred             cEEEEcCCCCc---------------------ccHHHHHHh----CC-CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           74 DVVYDINGREA---------------------DEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        74 d~vi~~a~~~~---------------------~~~~~~~~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      |++||+||...                     .++..+.++    +. ...++|++||...+....   ....|+.+|..
T Consensus        80 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~~---~~~~Y~asK~a  156 (254)
T 3kzv_A           80 DSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYFS---SWGAYGSSKAA  156 (254)
T ss_dssp             CEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSSC---CSHHHHHHHHH
T ss_pred             cEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCCC---CcchHHHHHHH
Confidence            99999998631                     112233333    33 237999999977654322   22269999988


Q ss_pred             HHHHHHh-----cCCceEEEecCeeeCCCCCCc--------hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHH
Q 021331          128 TESVLES-----KGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       128 ~e~~~~~-----~~~~~~ilR~~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                      .+.+.+.     .++++..++||.+.++.....        .............+         ...+.+.+|+|++++.
T Consensus       157 ~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~r~~~p~dva~~v~~  227 (254)
T 3kzv_A          157 LNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKE---------NNQLLDSSVPATVYAK  227 (254)
T ss_dssp             HHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHT---------TC----CHHHHHHHHH
T ss_pred             HHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHh---------cCCcCCcccHHHHHHH
Confidence            8877642     479999999999988743211        01222222221111         1246788999999999


Q ss_pred             HhcCCc---cCCceEEecCCccc
Q 021331          195 VLGNEK---ASRQVFNISGEKYV  214 (314)
Q Consensus       195 ~l~~~~---~~~~~~~i~~~~~~  214 (314)
                      ++....   ..|+.+++.+++..
T Consensus       228 L~s~~~~~~itG~~i~vdg~~~~  250 (254)
T 3kzv_A          228 LALHGIPDGVNGQYLSYNDPALA  250 (254)
T ss_dssp             HHHHCCCGGGTTCEEETTCGGGG
T ss_pred             HHhhcccCCCCccEEEecCcccc
Confidence            997652   37889999887643

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.59  E-value=5.5e-15  Score=121.63  Aligned_cols=170  Identities=16%  Similarity=0.119  Sum_probs=117.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......        .....++.++.+|++|+++++++++..     ++|+
T Consensus         9 TGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            9 TGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQE--------LLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            799999999999999999999999999876532111        011236899999999999988887643     6899


Q ss_pred             EEEcCCCCcc--------------------cH----HHHHHhCC-CCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           76 VYDINGREAD--------------------EV----EPILDALP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      +||+||....                    ++    +.++..+. ...++|++||...+...   +....|+.+|...+.
T Consensus        81 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~---~~~~~Y~asKaa~~~  157 (235)
T 3l6e_A           81 VLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGK---ANESLYCASKWGMRG  157 (235)
T ss_dssp             EEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSC---SSHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCC---CCCcHHHHHHHHHHH
Confidence            9999997321                    12    23333343 33489999997655322   222369999988887


Q ss_pred             HHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          131 VLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       131 ~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      +.+       ..++++..++||.+..+...     ..    .. .         ....+.+.+|+|++++.+++.+.
T Consensus       158 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-----~~----~~-~---------~~~~~~~pedvA~~v~~l~~~~~  215 (235)
T 3l6e_A          158 FLESLRAELKDSPLRLVNLYPSGIRSEFWD-----NT----DH-V---------DPSGFMTPEDAAAYMLDALEARS  215 (235)
T ss_dssp             HHHHHHHHTTTSSEEEEEEEEEEECCCC------------------------------CBCHHHHHHHHHHHTCCCS
T ss_pred             HHHHHHHHhhccCCEEEEEeCCCccCcchh-----cc----CC-C---------CCcCCCCHHHHHHHHHHHHhCCC
Confidence            764       35799999999998776211     00    00 0         11257889999999999998654

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.59  E-value=2.8e-15  Score=126.67  Aligned_cols=182  Identities=13%  Similarity=0.125  Sum_probs=120.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhcc-CceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.... ..+.++.+|++|++++.++++..     ++|
T Consensus        39 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  113 (281)
T 4dry_A           39 TGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAA-----GEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLD  113 (281)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            899999999999999999999999999876532111     1111111 23589999999999988887643     689


Q ss_pred             EEEEcCCCCcc---------------------c----HHHHHHhCC--C--CCcEEEEeeceeeccCCCCCccCccccch
Q 021331           75 VVYDINGREAD---------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        75 ~vi~~a~~~~~---------------------~----~~~~~~~~~--~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      ++||+||....                     +    ++.++..+.  +  ..++|++||...+...   +....|+.+|
T Consensus       114 ~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~---~~~~~Y~asK  190 (281)
T 4dry_A          114 LLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPR---PNSAPYTATK  190 (281)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCC---TTCHHHHHHH
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCC---CCChhHHHHH
Confidence            99999986321                     1    222333333  2  4689999997654322   2222689999


Q ss_pred             hhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          126 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       126 ~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      ...+.+.+       .+++++..++||.|..+..     .    .... ..... ........+++.+|+|++++.++++
T Consensus       191 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~-----~----~~~~-~~~~~-~~~~~~~~~~~pedvA~~v~fL~s~  259 (281)
T 4dry_A          191 HAITGLTKSTALDGRMHDIACGQIDIGNAATDMT-----A----RMST-GVLQA-NGEVAAEPTIPIEHIAEAVVYMASL  259 (281)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEEECBCC----------------C-EEECT-TSCEEECCCBCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEECcCcChhh-----h----hhcc-hhhhh-hhcccccCCCCHHHHHHHHHHHhCC
Confidence            88877753       3689999999999877621     1    1111 00000 1111223477899999999999997


Q ss_pred             Ccc
Q 021331          199 EKA  201 (314)
Q Consensus       199 ~~~  201 (314)
                      +..
T Consensus       260 ~~~  262 (281)
T 4dry_A          260 PLS  262 (281)
T ss_dssp             CTT
T ss_pred             Ccc
Confidence            653

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.59  E-value=1.9e-14  Score=120.74  Aligned_cols=198  Identities=15%  Similarity=0.107  Sum_probs=133.2

Q ss_pred             CCcc--cccHHHHHHHHHHCCCeEEEEEcCCccc-ccCCCCCCchhhh-hccCceEEEEecCCChhhHHHhhhcC-----
Q 021331            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAK-----   71 (314)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~l~~~~~~~-----   71 (314)
                      |||+  |+||.++++.|+++|++|++++|+.... ....     +.+. ....++.++.+|++|++++++++++.     
T Consensus        26 TGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  100 (267)
T 3gdg_A           26 TGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENV-----KELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFG  100 (267)
T ss_dssp             TTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHH-----HHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTS
T ss_pred             ECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHH-----HHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence            7999  8999999999999999999999886542 1111     1111 12357889999999999988887643     


Q ss_pred             CccEEEEcCCCCc--------------------ccHHHHHHhC----C--CCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           72 GFDVVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        72 ~~d~vi~~a~~~~--------------------~~~~~~~~~~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      ++|++||+||...                    .++.++++++    .  +..++|++||...+.... .+....|+.+|
T Consensus       101 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-~~~~~~Y~~sK  179 (267)
T 3gdg_A          101 QIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANF-PQEQTSYNVAK  179 (267)
T ss_dssp             CCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCS-SSCCHHHHHHH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCC-CCCCCcchHHH
Confidence            6899999998632                    1122333333    3  567999999966543211 11222699999


Q ss_pred             hhHHHHHH----hc--CCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          126 LNTESVLE----SK--GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       126 ~~~e~~~~----~~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      ...+.+.+    +.  .+.+..+.||.+..+... ..............         ....+.+++|+|++++.++...
T Consensus       180 ~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~-~~~~~~~~~~~~~~---------~~~r~~~~~dva~~~~~l~s~~  249 (267)
T 3gdg_A          180 AGCIHMARSLANEWRDFARVNSISPGYIDTGLSD-FVPKETQQLWHSMI---------PMGRDGLAKELKGAYVYFASDA  249 (267)
T ss_dssp             HHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGG-GSCHHHHHHHHTTS---------TTSSCEETHHHHHHHHHHHSTT
T ss_pred             HHHHHHHHHHHHHhccCcEEEEEECCccccchhh-hCCHHHHHHHHhcC---------CCCCCcCHHHHHhHhheeecCc
Confidence            88887764    22  278999999999876321 11222222222221         1235778999999999999763


Q ss_pred             c--cCCceEEecCCccc
Q 021331          200 K--ASRQVFNISGEKYV  214 (314)
Q Consensus       200 ~--~~~~~~~i~~~~~~  214 (314)
                      .  ..|+++++.+|..+
T Consensus       250 ~~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          250 STYTTGADLLIDGGYTT  266 (267)
T ss_dssp             CTTCCSCEEEESTTGGG
T ss_pred             cccccCCEEEECCceec
Confidence            2  36899999998643

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.59  E-value=5.7e-15  Score=125.49  Aligned_cols=196  Identities=11%  Similarity=0.055  Sum_probs=131.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEE-cCCcccccCCCCCCchhhh-hccCceEEEEecCCChh----------------
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYD----------------   62 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~----------------   62 (314)
                      |||+|+||.++++.|+++|++|++++ |+.+......     ..+. ....++.++.+|++|++                
T Consensus        15 TGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   89 (291)
T 1e7w_A           15 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS-----ATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   89 (291)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-----HHHhhhcCCeeEEEEeecCCcccccccccccccccchH
Confidence            89999999999999999999999999 8764422110     0111 11357889999999998                


Q ss_pred             -hHHHhhhcC-----CccEEEEcCCCCc-----------------------cc---------------HHHHHHhCC--C
Q 021331           63 -FVKSSLSAK-----GFDVVYDINGREA-----------------------DE---------------VEPILDALP--N   96 (314)
Q Consensus        63 -~l~~~~~~~-----~~d~vi~~a~~~~-----------------------~~---------------~~~~~~~~~--~   96 (314)
                       ++.++++..     ++|++||+||...                       ..               ++.++..+.  +
T Consensus        90 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~  169 (291)
T 1e7w_A           90 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  169 (291)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence             888877643     7999999998631                       10               112222232  3


Q ss_pred             ------CCcEEEEeeceeeccCCCCCccCccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHH
Q 021331           97 ------LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR  163 (314)
Q Consensus        97 ------~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~  163 (314)
                            ..++|++||...+...   +....|..+|...+.+.+       .++++++.++||.+..+. .  +.......
T Consensus       170 ~~~~~~~g~Iv~isS~~~~~~~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--~~~~~~~~  243 (291)
T 1e7w_A          170 AKHRGTNYSIINMVDAMTNQPL---LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--MPPAVWEG  243 (291)
T ss_dssp             GGGSCSCEEEEEECCTTTTSCC---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--SCHHHHHH
T ss_pred             CCCCCCCcEEEEEechhhcCCC---CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--CCHHHHHH
Confidence                  5789999997665322   222368999988877653       358999999999987763 1  11222222


Q ss_pred             HHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cCCceEEecCCcccc
Q 021331          164 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~~~~~~i~~~~~~s  215 (314)
                      .....+  + +     ..+.+.+|+|++++.++....  ..|.++++.++..++
T Consensus       244 ~~~~~p--~-~-----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  289 (291)
T 1e7w_A          244 HRSKVP--L-Y-----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  289 (291)
T ss_dssp             HHTTCT--T-T-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHhhCC--C-C-----CCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcccc
Confidence            222111  1 1     035679999999999997532  368899999886543

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.58  E-value=8.9e-16  Score=127.24  Aligned_cols=180  Identities=16%  Similarity=0.134  Sum_probs=109.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhh---HHHhhhcC-CccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAK-GFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~---l~~~~~~~-~~d~v   76 (314)
                      |||+|+||.++++.|++ |+.|++++|+.+.......          ..++.++.+|+.+.+.   +.+.++.. ++|++
T Consensus        11 TGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   79 (245)
T 3e9n_A           11 TGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE----------IEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTL   79 (245)
T ss_dssp             ESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT----------STTEEEEECCHHHHHHTSSSCGGGTTCSCCSEE
T ss_pred             EcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh----------hcCCcceecccchHHHHHHHHHHHHhcCCCCEE
Confidence            79999999999999987 8999999998765321111          2568899999988743   22233322 69999


Q ss_pred             EEcCCCCcc--------------------c----HHHHHHhCC-CCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           77 YDINGREAD--------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        77 i~~a~~~~~--------------------~----~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      ||+||....                    +    ++.++..+. ...++|++||...+....   ....|+.+|...+.+
T Consensus        80 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~Y~asK~a~~~~  156 (245)
T 3e9n_A           80 VHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHP---GNTIYAASKHALRGL  156 (245)
T ss_dssp             EECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC-------------CHHHHHHHHHHHHH
T ss_pred             EECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCC---CchHHHHHHHHHHHH
Confidence            999987321                    1    222333333 236899999987765322   223699999988877


Q ss_pred             HH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCc
Q 021331          132 LE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  204 (314)
Q Consensus       132 ~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~  204 (314)
                      .+       ..++++.+++||.+.++...     .+.....         .......+++++|+|++++.+++.+. .+.
T Consensus       157 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~-----~~~~~~~---------~~~~~~~~~~p~dvA~~i~~l~~~~~-~~~  221 (245)
T 3e9n_A          157 ADAFRKEEANNGIRVSTVSPGPTNTPMLQ-----GLMDSQG---------TNFRPEIYIEPKEIANAIRFVIDAGE-TTQ  221 (245)
T ss_dssp             HHHHHHHHGGGTCEEEEEEECCC------------------------------CCGGGSCHHHHHHHHHHHHTSCT-TEE
T ss_pred             HHHHHHHhhhcCeEEEEEecCCccCchhh-----hhhhhhh---------cccccccCCCHHHHHHHHHHHHcCCC-ccc
Confidence            64       36899999999999887321     1111100         00112347889999999999998765 456


Q ss_pred             eEEec
Q 021331          205 VFNIS  209 (314)
Q Consensus       205 ~~~i~  209 (314)
                      ++++.
T Consensus       222 ~~~i~  226 (245)
T 3e9n_A          222 ITNVD  226 (245)
T ss_dssp             EEEEE
T ss_pred             eeeeE
Confidence            77764

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.58  E-value=1.6e-15  Score=128.29  Aligned_cols=194  Identities=15%  Similarity=0.156  Sum_probs=129.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......        .....++.++.+|++|++++.++++..     ++|+
T Consensus        11 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A           11 TGGASGLGRALVDRFVAEGARVAVLDKSAERLRELE--------VAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHH--------HHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865532111        111357899999999999888877643     6899


Q ss_pred             EEEcCCCCc-------------------------ccHHHHHHh----CC-CCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           76 VYDINGREA-------------------------DEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        76 vi~~a~~~~-------------------------~~~~~~~~~----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      +||+||...                         .++..+.++    +. ...++|++||...+...   +....|+.+|
T Consensus        83 lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asK  159 (281)
T 3zv4_A           83 LIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPN---GGGPLYTATK  159 (281)
T ss_dssp             EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSS---SSCHHHHHHH
T ss_pred             EEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCC---CCCchhHHHH
Confidence            999998621                         011222222    22 33689999997654322   2222599999


Q ss_pred             hhHHHHHHh------cCCceEEEecCeeeCCCCCCc---hhH------HHHHHHHcCCCeecCCCCCceeeeeeHHHHHH
Q 021331          126 LNTESVLES------KGVNWTSLRPVYIYGPLNYNP---VEE------WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  190 (314)
Q Consensus       126 ~~~e~~~~~------~~~~~~ilR~~~v~g~~~~~~---~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  190 (314)
                      ...+.+.+.      ..+++..++||.+..+.....   ...      ..........+         ...+.+.+|+|+
T Consensus       160 aa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedvA~  230 (281)
T 3zv4_A          160 HAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLP---------IGRMPALEEYTG  230 (281)
T ss_dssp             HHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCT---------TSSCCCGGGGSH
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCC---------CCCCCCHHHHHH
Confidence            888877642      238999999999987632110   000      01111211111         124677899999


Q ss_pred             HHHHHhcCCc---cCCceEEecCCccc
Q 021331          191 AFVQVLGNEK---ASRQVFNISGEKYV  214 (314)
Q Consensus       191 ~~~~~l~~~~---~~~~~~~i~~~~~~  214 (314)
                      +++.++..+.   ..|+++++.||..+
T Consensus       231 ~v~fL~s~~~~~~itG~~i~vdGG~~~  257 (281)
T 3zv4_A          231 AYVFFATRGDSLPATGALLNYDGGMGV  257 (281)
T ss_dssp             HHHHHHSTTTSTTCSSCEEEESSSGGG
T ss_pred             HHHHhhcccccccccCcEEEECCCCcc
Confidence            9999998332   37899999998644

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.57  E-value=2.1e-15  Score=124.59  Aligned_cols=195  Identities=14%  Similarity=0.157  Sum_probs=133.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++.+|+.+......     .++.....++.++.+|++|++++++++++.     ++|+
T Consensus        15 TGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~-----~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   89 (255)
T 4g81_D           15 TGSARGLGFAYAEGLAAAGARVILNDIRATLLAESV-----DTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDI   89 (255)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-----HHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence            899999999999999999999999999876532211     133333467889999999999888777542     6999


Q ss_pred             EEEcCCCCccc------------------------HHHHHHhCC---CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREADE------------------------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~~------------------------~~~~~~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||.....                        ++.++..+.   +..++|++||...+...   |....|..+|...
T Consensus        90 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~---~~~~~Y~asKaal  166 (255)
T 4g81_D           90 LINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAAR---PTVAPYTAAKGGI  166 (255)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBC---TTCHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCC---CCchhHHHHHHHH
Confidence            99999974211                        344444442   44689999997654322   2223688889877


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      ..+.+       .+|+++..|.||.|..|...... -..+...+....++         ..+...+|+|.+++.++....
T Consensus       167 ~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl---------~R~g~pediA~~v~fL~S~~a  237 (255)
T 4g81_D          167 KMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPS---------QRWGRPEELIGTAIFLSSKAS  237 (255)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTT---------CSCBCGGGGHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCC---------CCCcCHHHHHHHHHHHhCchh
Confidence            76653       46899999999998776311000 01112222222222         125568999999999997533


Q ss_pred             --cCCceEEecCCc
Q 021331          201 --ASRQVFNISGEK  212 (314)
Q Consensus       201 --~~~~~~~i~~~~  212 (314)
                        -.|+.+.+.||.
T Consensus       238 ~~iTG~~i~VDGG~  251 (255)
T 4g81_D          238 DYINGQIIYVDGGW  251 (255)
T ss_dssp             TTCCSCEEEESTTG
T ss_pred             CCCcCCEEEECCCe
Confidence              378899999885

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.57  E-value=3e-15  Score=124.34  Aligned_cols=186  Identities=17%  Similarity=0.189  Sum_probs=122.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc---cCceEEEEecCCChhhHHHhhhcC-----C
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDRKDYDFVKSSLSAK-----G   72 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~d~~~l~~~~~~~-----~   72 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......     .+...   ..++.++.+|++|++++.++++..     +
T Consensus        13 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (250)
T 3nyw_A           13 TGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHD-----EIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGA   87 (250)
T ss_dssp             ESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHH-----HHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            7999999999999999999999999998765321110     11111   156889999999999888877643     6


Q ss_pred             ccEEEEcCCCCcc-------------------cHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           73 FDVVYDINGREAD-------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        73 ~d~vi~~a~~~~~-------------------~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      +|++||+||....                   ++..+.++    +.  +..++|++||...+....  + ...|+.+|..
T Consensus        88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--~-~~~Y~asKaa  164 (250)
T 3nyw_A           88 VDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFA--D-GGIYGSTKFA  164 (250)
T ss_dssp             EEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------C--C-TTHHHHHHHH
T ss_pred             CCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCC--C-CcchHHHHHH
Confidence            9999999997321                   12223333    33  567999999966543211  1 2369999988


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.+.+       ..++++..++||.+..+     +    ....  ....       ....+++.+|+|++++.+++.+.
T Consensus       165 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~-----~----~~~~--~~~~-------~~~~~~~p~dva~~v~~l~s~~~  226 (250)
T 3nyw_A          165 LLGLAESLYRELAPLGIRVTTLCPGWVNTD-----M----AKKA--GTPF-------KDEEMIQPDDLLNTIRCLLNLSE  226 (250)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESSBCSH-----H----HHHT--TCCS-------CGGGSBCHHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEecCcccCc-----h----hhhc--CCCc-------ccccCCCHHHHHHHHHHHHcCCC
Confidence            777653       35899999999988764     1    1111  1111       12347889999999999998654


Q ss_pred             c---CCceEEecCCc
Q 021331          201 A---SRQVFNISGEK  212 (314)
Q Consensus       201 ~---~~~~~~i~~~~  212 (314)
                      .   .+-++.+.+++
T Consensus       227 ~~~~~~~~i~vd~~~  241 (250)
T 3nyw_A          227 NVCIKDIVFEMKKSI  241 (250)
T ss_dssp             TEECCEEEEEEHHHH
T ss_pred             ceEeeEEEEEeeccc
Confidence            2   23345555544

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.57  E-value=2.1e-14  Score=124.70  Aligned_cols=192  Identities=15%  Similarity=0.122  Sum_probs=127.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCC--CCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG--ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+||.++++.|+++|++|++++|+.++.......  .....+.....++.++.+|++|++++.++++..     ++
T Consensus        51 TGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  130 (346)
T 3kvo_A           51 TGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGI  130 (346)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             eCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            79999999999999999999999999987753221110  001223333467899999999999988888654     79


Q ss_pred             cEEEEcCCCC--------------------cccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           74 DVVYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        74 d~vi~~a~~~--------------------~~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      |++||+||..                    ..++.+++++    +.  +..+||++||...+.... .+....|..+|..
T Consensus       131 DilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~-~~~~~~Y~aSKaa  209 (346)
T 3kvo_A          131 DILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVW-FKQHCAYTIAKYG  209 (346)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGG-TSSSHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCC-CCCchHHHHHHHH
Confidence            9999999963                    1223334444    33  457999999977654311 1112268999988


Q ss_pred             HHHHHH----h--cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCcc
Q 021331          128 TESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  201 (314)
Q Consensus       128 ~e~~~~----~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~  201 (314)
                      .+.+.+    +  .++.+..|.|+.+...        .+...+....         ....+...+|+|++++.++.....
T Consensus       210 l~~l~~~la~e~~~gIrvn~v~PG~~i~T--------~~~~~~~~~~---------~~~r~~~pedvA~~v~~L~s~~~~  272 (346)
T 3kvo_A          210 MSMYVLGMAEEFKGEIAVNALWPKTAIHT--------AAMDMLGGPG---------IESQCRKVDIIADAAYSIFQKPKS  272 (346)
T ss_dssp             HHHHHHHHHHHTTTTCEEEEEECSBCBCC--------HHHHHHCC-----------CGGGCBCTHHHHHHHHHHHTSCTT
T ss_pred             HHHHHHHHHHHhcCCcEEEEEeCCCcccc--------HHHHhhcccc---------ccccCCCHHHHHHHHHHHHhcCCC
Confidence            777653    2  5799999999863332        1122221111         122466789999999999987332


Q ss_pred             -CCceEEecCC
Q 021331          202 -SRQVFNISGE  211 (314)
Q Consensus       202 -~~~~~~i~~~  211 (314)
                       .|+++ +.++
T Consensus       273 itG~~i-vdgg  282 (346)
T 3kvo_A          273 FTGNFV-IDEN  282 (346)
T ss_dssp             CCSCEE-EHHH
T ss_pred             CCceEE-ECCc
Confidence             55555 6554

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.57  E-value=1.4e-14  Score=118.82  Aligned_cols=171  Identities=13%  Similarity=0.078  Sum_probs=115.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC--CccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~--~~d~vi~   78 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.......        +...++.++.+|++|++++.++++..  ..|++||
T Consensus         7 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~   78 (230)
T 3guy_A            7 TGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTN--------CLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH   78 (230)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred             ecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence            7999999999999999999999999998765321111        11257889999999999999998743  2499999


Q ss_pred             cCCCCcc--------------------cHHHH----HHhCC-CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHH
Q 021331           79 INGREAD--------------------EVEPI----LDALP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLE  133 (314)
Q Consensus        79 ~a~~~~~--------------------~~~~~----~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~  133 (314)
                      +||....                    ++.++    +..+. ...++|++||...+...   +....|+.+|...+.+.+
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~---~~~~~Y~asKaa~~~~~~  155 (230)
T 3guy_A           79 SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPK---AQESTYCAVKWAVKGLIE  155 (230)
T ss_dssp             CCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCC---TTCHHHHHHHHHHHHHHH
T ss_pred             eCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCC---CCCchhHHHHHHHHHHHH
Confidence            9986321                    12223    33333 23389999997765432   222369999988887764


Q ss_pred             -------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          134 -------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       134 -------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                             ..++++..++||.+..+..     .    ...  ..       .....+.+++|+|++++.++..+.
T Consensus       156 ~la~e~~~~gi~v~~v~PG~v~t~~~-----~----~~~--~~-------~~~~~~~~~~dvA~~i~~l~~~~~  211 (230)
T 3guy_A          156 SVRLELKGKPMKIIAVYPGGMATEFW-----E----TSG--KS-------LDTSSFMSAEDAALMIHGALANIG  211 (230)
T ss_dssp             HHHHHTTTSSCEEEEEEECCC----------------------------------CCCHHHHHHHHHHHCCEET
T ss_pred             HHHHHHHhcCeEEEEEECCcccChHH-----H----hcC--CC-------CCcccCCCHHHHHHHHHHHHhCcC
Confidence                   2479999999998876521     1    110  00       112457889999999999987543

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.57  E-value=4.1e-15  Score=124.36  Aligned_cols=194  Identities=15%  Similarity=0.077  Sum_probs=120.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC------Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~------~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.....++.++.+|++|++++.++++..      ++|
T Consensus        11 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id   85 (260)
T 2qq5_A           11 TGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVA-----QEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLD   85 (260)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCce
Confidence            899999999999999999999999999865422111     112112356889999999999888776531      579


Q ss_pred             EEEEcCCCCc---------------------------ccH----HHHHHhCC--CCCcEEEEeeceeeccCCCCCccCcc
Q 021331           75 VVYDINGREA---------------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESR  121 (314)
Q Consensus        75 ~vi~~a~~~~---------------------------~~~----~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (314)
                      ++||+||...                           .++    +.++..+.  +..++|++||...+...   + ...|
T Consensus        86 ~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~-~~~Y  161 (260)
T 2qq5_A           86 VLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM---F-NVPY  161 (260)
T ss_dssp             EEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC---S-SHHH
T ss_pred             EEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC---C-CCch
Confidence            9999994210                           011    22333333  55799999997765422   1 1269


Q ss_pred             ccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHH
Q 021331          122 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       122 ~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                      +.+|...+.+.+       .+++++++++||.+..+...... ..  ...........  .......+...+|+|++++.
T Consensus       162 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~--~~~~~~~~~~~--~~~~~~~~~~pe~va~~v~~  236 (260)
T 2qq5_A          162 GVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHM-AK--EEVLQDPVLKQ--FKSAFSSAETTELSGKCVVA  236 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC---------------------------CHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhh-cc--ccccchhHHHH--HHhhhccCCCHHHHHHHHHH
Confidence            999998887763       35899999999999877321110 00  00000000000  00001123578999999999


Q ss_pred             HhcCCcc---CCceEEe
Q 021331          195 VLGNEKA---SRQVFNI  208 (314)
Q Consensus       195 ~l~~~~~---~~~~~~i  208 (314)
                      ++..+..   .|..+.+
T Consensus       237 l~s~~~~~~itG~~i~~  253 (260)
T 2qq5_A          237 LATDPNILSLSGKVLPS  253 (260)
T ss_dssp             HHTCTTGGGGTTCEEEH
T ss_pred             HhcCcccccccceeech
Confidence            9986531   4544443

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.57  E-value=1.8e-14  Score=120.10  Aligned_cols=192  Identities=18%  Similarity=0.217  Sum_probs=131.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++++|+.+....        ...+...++..+.+|++|++++++++++.     ++|+
T Consensus        35 TGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~--------~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           35 TGATSGIGLAAAKRFVAEGARVFITGRRKDVLDA--------AIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998765432        12223467889999999999888877643     6999


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           76 VYDINGREAD--------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      +||+||....                    +    ++.++..+++..++|++||......   .|....|..+|.....+
T Consensus       107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~---~~~~~~Y~asKaav~~l  183 (273)
T 4fgs_A          107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTG---TPAFSVYAASKAALRSF  183 (273)
T ss_dssp             EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSC---CTTCHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccC---CCCchHHHHHHHHHHHH
Confidence            9999987321                    1    2333333444458999999655422   22223689999887776


Q ss_pred             HH-------hcCCceEEEecCeeeCCCCCCc-----h-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          132 LE-------SKGVNWTSLRPVYIYGPLNYNP-----V-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       132 ~~-------~~~~~~~ilR~~~v~g~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      .+       .+|+++..|.||.+..|.....     . ...+...+....|+         ..+...+|+|.+++.+++.
T Consensus       184 tr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Pl---------gR~g~peeiA~~v~FLaSd  254 (273)
T 4fgs_A          184 ARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPM---------GRVGRAEEVAAAALFLASD  254 (273)
T ss_dssp             HHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTT---------SSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCc
Confidence            54       3679999999999877642111     0 11222223222222         1255689999999999976


Q ss_pred             Cc--cCCceEEecCCc
Q 021331          199 EK--ASRQVFNISGEK  212 (314)
Q Consensus       199 ~~--~~~~~~~i~~~~  212 (314)
                      ..  -.|..+.+.||.
T Consensus       255 ~a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          255 DSSFVTGAELFVDGGS  270 (273)
T ss_dssp             GGTTCCSCEEEESTTT
T ss_pred             hhcCccCCeEeECcCh
Confidence            33  378899998875

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.56  E-value=1.2e-14  Score=120.97  Aligned_cols=190  Identities=14%  Similarity=0.099  Sum_probs=120.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||+|+||.++++.|+++|++|++++|+.+..... .     .+.....++..+  |.   ++++++++..     ++|+
T Consensus         7 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~-----~l~~~~~~~~~~--d~---~~v~~~~~~~~~~~g~iD~   75 (254)
T 1zmt_A            7 TNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL-E-----AFAETYPQLKPM--SE---QEPAELIEAVTSAYGQVDV   75 (254)
T ss_dssp             SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHH-H-----HHHHHCTTSEEC--CC---CSHHHHHHHHHHHHSCCCE
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-H-----HHHhcCCcEEEE--CH---HHHHHHHHHHHHHhCCCCE
Confidence            89999999999999999999999999986542210 0     011111233333  44   3344433321     7999


Q ss_pred             EEEcCCCC-cc--------------------cHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGRE-AD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~-~~--------------------~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||.. ..                    ++..+.++    +.  +..++|++||...+...   +....|..+|...
T Consensus        76 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~~sK~a~  152 (254)
T 1zmt_A           76 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW---KELSTYTSARAGA  152 (254)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC---TTCHHHHHHHHHH
T ss_pred             EEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC---CCchHHHHHHHHH
Confidence            99999864 21                    12223333    32  56799999997665322   2223689999888


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHH-------HHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHH
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWF-------FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                      +.+.+       .+++++++++||.|+||.........+       ........+         ...+.+.+|+|++++.
T Consensus       153 ~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p---------~~~~~~p~dvA~~v~~  223 (254)
T 1zmt_A          153 CTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTA---------LQRLGTQKELGELVAF  223 (254)
T ss_dssp             HHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSS---------SSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCC---------CCCCcCHHHHHHHHHH
Confidence            77653       358999999999998875432211111       111111111         1236789999999999


Q ss_pred             HhcCCc--cCCceEEecCCcc
Q 021331          195 VLGNEK--ASRQVFNISGEKY  213 (314)
Q Consensus       195 ~l~~~~--~~~~~~~i~~~~~  213 (314)
                      ++....  ..|+++++.++..
T Consensus       224 l~s~~~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          224 LASGSCDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             HHTTSCGGGTTCEEEESTTCC
T ss_pred             HhCcccCCccCCEEEECCCch
Confidence            998643  3688999998864

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.55  E-value=2.2e-14  Score=120.87  Aligned_cols=187  Identities=17%  Similarity=0.145  Sum_probs=122.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCC--CchhhhhccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE--SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|+||.++++.|+++|++|++++|+.+.........  ....+.....++.++.+|++|++++.+++++.     ++
T Consensus        12 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   91 (274)
T 3e03_A           12 TGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDTFGGI   91 (274)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            799999999999999999999999999876532211100  00122223467899999999999888887643     79


Q ss_pred             cEEEEcCCCCc--------------------ccH----HHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           74 DVVYDINGREA--------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        74 d~vi~~a~~~~--------------------~~~----~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      |++||+||...                    .++    +.++..+.  +..++|++||...+.... .+....|+.+|..
T Consensus        92 D~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-~~~~~~Y~asKaa  170 (274)
T 3e03_A           92 DILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW-WGAHTGYTLAKMG  170 (274)
T ss_dssp             CEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH-HHHCHHHHHHHHH
T ss_pred             CEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC-CCCCchHHHHHHH
Confidence            99999999631                    112    23333343  457999999976543210 0111258999988


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.+.+       ..|+++..++||.+....    +.     ......         ....+.+.+|+|++++.++....
T Consensus       171 l~~l~~~la~e~~~~gI~vn~v~PG~~v~T~----~~-----~~~~~~---------~~~~~~~pedvA~~v~~l~s~~~  232 (274)
T 3e03_A          171 MSLVTLGLAAEFGPQGVAINALWPRTVIATD----AI-----NMLPGV---------DAAACRRPEIMADAAHAVLTREA  232 (274)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEECSBCBCC----------------CC---------CGGGSBCTHHHHHHHHHHHTSCC
T ss_pred             HHHHHHHHHHHhhhcCEEEEEEECCcccccc----hh-----hhcccc---------cccccCCHHHHHHHHHHHhCccc
Confidence            877653       358999999998543321    11     111111         11236689999999999998643


Q ss_pred             c--CCceE
Q 021331          201 A--SRQVF  206 (314)
Q Consensus       201 ~--~~~~~  206 (314)
                      .  .|+++
T Consensus       233 ~~itG~~i  240 (274)
T 3e03_A          233 AGFHGQFL  240 (274)
T ss_dssp             TTCCSCEE
T ss_pred             cccCCeEE
Confidence            2  45555

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.55  E-value=2.8e-14  Score=116.80  Aligned_cols=193  Identities=18%  Similarity=0.151  Sum_probs=133.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||++.||.++++.|.++|.+|++.+|+.....       ...+.+...++..+.+|++|+++++.+++.-++|++||+|
T Consensus        15 TGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~-------~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNA   87 (247)
T 4hp8_A           15 TGANTGLGQAIAVGLAAAGAEVVCAARRAPDET-------LDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNA   87 (247)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHH-------HHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECC
T ss_pred             eCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHH-------HHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECC
Confidence            899999999999999999999999999754311       1233344567899999999999998888766799999999


Q ss_pred             CCCccc------------------------HHHHHHhCC---CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHH
Q 021331           81 GREADE------------------------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLE  133 (314)
Q Consensus        81 ~~~~~~------------------------~~~~~~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~  133 (314)
                      |.....                        ++.++..|.   +..++|++||...+..   .|....|..+|.....+.+
T Consensus        88 Gi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g---~~~~~~Y~asKaav~~ltr  164 (247)
T 4hp8_A           88 GIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQG---GIRVPSYTAAKHGVAGLTK  164 (247)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC---CSSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCC---CCCChHHHHHHHHHHHHHH
Confidence            974211                        334444443   3468999999655422   2222368989987776653


Q ss_pred             -------hcCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cCC
Q 021331          134 -------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASR  203 (314)
Q Consensus       134 -------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~~  203 (314)
                             .+|+++..|.||.|-.|...... -....+.+....|+         ..+-..+|+|.+++.+++...  -.|
T Consensus       165 ~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl---------gR~g~peeiA~~v~fLaSd~a~~iTG  235 (247)
T 4hp8_A          165 LLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPA---------GRWGHSEDIAGAAVFLSSAAADYVHG  235 (247)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTT---------SSCBCTHHHHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCC---------CCCcCHHHHHHHHHHHhCchhcCCcC
Confidence                   46899999999998766211000 01112222222222         135568999999999987633  278


Q ss_pred             ceEEecCCc
Q 021331          204 QVFNISGEK  212 (314)
Q Consensus       204 ~~~~i~~~~  212 (314)
                      ..+.+.||.
T Consensus       236 ~~i~VDGG~  244 (247)
T 4hp8_A          236 AILNVDGGW  244 (247)
T ss_dssp             CEEEESTTG
T ss_pred             CeEEECccc
Confidence            899999885

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.55  E-value=3.1e-14  Score=119.61  Aligned_cols=194  Identities=15%  Similarity=0.101  Sum_probs=126.3

Q ss_pred             CCc--ccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-------
Q 021331            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-------   71 (314)
Q Consensus         1 tGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-------   71 (314)
                      |||  +|+||.++++.|+++|++|++++|+.+.....+..       ....++.++.+|++|+++++++++..       
T Consensus        13 TGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A           13 SGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD-------RLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             CCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT-------TSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             ECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHH-------hcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            788  99999999999999999999999987542111100       01246788999999999998888643       


Q ss_pred             -CccEEEEcCCCCcc-------------------------cHHHHHHhCC----CCCcEEEEeeceeeccCCCCCccCcc
Q 021331           72 -GFDVVYDINGREAD-------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCESR  121 (314)
Q Consensus        72 -~~d~vi~~a~~~~~-------------------------~~~~~~~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (314)
                       ++|++||+||....                         ++..+.+++.    ...++|++||...++.    +....|
T Consensus        86 ~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~----~~~~~Y  161 (269)
T 2h7i_A           86 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAM----PAYNWM  161 (269)
T ss_dssp             CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCC----TTTHHH
T ss_pred             CCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccccc----CchHHH
Confidence             79999999986430                         1122333332    2358999998765322    222358


Q ss_pred             ccchhhHHHHHH-------hcCCceEEEecCeeeCCCCC-------Cchh----HHHHHHHHcCCCeecCCCCCceeeee
Q 021331          122 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-------NPVE----EWFFHRLKAGRPIPIPGSGIQVTQLG  183 (314)
Q Consensus       122 ~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~-------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i  183 (314)
                      +.+|...+.+.+       .+++++..++||.+..+...       ..-.    ...........++   +     +.+.
T Consensus       162 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~-----rr~~  233 (269)
T 2h7i_A          162 TVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI---G-----WNMK  233 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT---C-----CCTT
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCc---c-----cCCC
Confidence            889988877653       35899999999988664100       0000    0001111111111   1     1255


Q ss_pred             eHHHHHHHHHHHhcCCc--cCCceEEecCCcc
Q 021331          184 HVKDLARAFVQVLGNEK--ASRQVFNISGEKY  213 (314)
Q Consensus       184 ~~~D~a~~~~~~l~~~~--~~~~~~~i~~~~~  213 (314)
                      ..+|+|++++.++....  ..|.++.+.+|..
T Consensus       234 ~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  265 (269)
T 2h7i_A          234 DATPVAKTVCALLSDWLPATTGDIIYADGGAH  265 (269)
T ss_dssp             CCHHHHHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred             CHHHHHHHHHHHhCchhccCcceEEEecCCee
Confidence            67999999999997632  3688999988854

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.55  E-value=9.1e-15  Score=123.98  Aligned_cols=174  Identities=16%  Similarity=0.131  Sum_probs=117.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhcc-CceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||+|+||.++++.|+++|++|++++|+.+......     ..+.+.. .++.++.+|++|++++.++++..     ++|
T Consensus        34 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD  108 (286)
T 1xu9_A           34 TGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV-----SHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLD  108 (286)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCS
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            899999999999999999999999999875432111     0111111 36889999999999888877542     799


Q ss_pred             EEEEc-CCCCc-------------------ccHHHHHHhC----C-CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           75 VVYDI-NGREA-------------------DEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        75 ~vi~~-a~~~~-------------------~~~~~~~~~~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      ++||+ ++...                   .++.++++++    . +..++|++||...+...   |....|+.+|...+
T Consensus       109 ~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~Y~asK~a~~  185 (286)
T 1xu9_A          109 MLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY---PMVAAYSASKFALD  185 (286)
T ss_dssp             EEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC---TTCHHHHHHHHHHH
T ss_pred             EEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCC---CCccHHHHHHHHHH
Confidence            99999 56421                   1222333332    2 34699999997765322   22236899998877


Q ss_pred             HHHH---------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          130 SVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       130 ~~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+.+         ..++++++++||.+.++     +..    ....+         .....+++.+|+|+.++.++..+.
T Consensus       186 ~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~-----~~~----~~~~~---------~~~~~~~~~~~vA~~i~~~~~~~~  247 (286)
T 1xu9_A          186 GFFSSIRKEYSVSRVNVSITLCVLGLIDTE-----TAM----KAVSG---------IVHMQAAPKEECALEIIKGGALRQ  247 (286)
T ss_dssp             HHHHHHHHHHHHHTCCCEEEEEEECCBCCH-----HHH----HHSCG---------GGGGGCBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhhcCCCeEEEEeecCccCCh-----hHH----Hhccc---------cccCCCCCHHHHHHHHHHHHhcCC
Confidence            7652         24789999999987665     111    11000         112346889999999999997654

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.55  E-value=8.3e-14  Score=116.00  Aligned_cols=195  Identities=10%  Similarity=0.075  Sum_probs=130.2

Q ss_pred             CCccc--ccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecCCChhhHHHhhhcC-----C
Q 021331            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----G   72 (314)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~~-----~   72 (314)
                      |||+|  .||.++++.|.++|++|++.+|+.+......     +.+++. ..++.++.+|++|++++.++++..     +
T Consensus        12 TGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (256)
T 4fs3_A           12 MGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELE-----KLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGN   86 (256)
T ss_dssp             ECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-----HHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             ECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            78876  8999999999999999999999865532110     112222 247889999999998888777532     6


Q ss_pred             ccEEEEcCCCCccc----------------------------HHHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccc
Q 021331           73 FDVVYDINGREADE----------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKG  124 (314)
Q Consensus        73 ~d~vi~~a~~~~~~----------------------------~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (314)
                      +|++||++|.....                            .+.....+++..++|++||......   .|....|..+
T Consensus        87 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~---~~~~~~Y~as  163 (256)
T 4fs3_A           87 IDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFA---VQNYNVMGVA  163 (256)
T ss_dssp             CSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSC---CTTTHHHHHH
T ss_pred             CCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccC---cccchhhHHH
Confidence            99999999863110                            0111122234468999999654322   2222368889


Q ss_pred             hhhHHHHHH-------hcCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          125 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       125 k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      |...+.+.+       .+|+++..|.||.+-.+.... .-.......+....|+.         .+...+|+|++++.++
T Consensus       164 Kaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~---------R~g~peevA~~v~fL~  234 (256)
T 4fs3_A          164 KASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLK---------RNVDQVEVGKTAAYLL  234 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTS---------SCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHh
Confidence            987766653       468999999999987764221 11233344444333321         2456899999999999


Q ss_pred             cCCc--cCCceEEecCCc
Q 021331          197 GNEK--ASRQVFNISGEK  212 (314)
Q Consensus       197 ~~~~--~~~~~~~i~~~~  212 (314)
                      +...  -.|+++.+.||.
T Consensus       235 Sd~a~~iTG~~i~VDGG~  252 (256)
T 4fs3_A          235 SDLSSGVTGENIHVDSGF  252 (256)
T ss_dssp             SGGGTTCCSCEEEESTTG
T ss_pred             CchhcCccCCEEEECcCH
Confidence            7633  378999999885

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.54  E-value=6e-14  Score=116.30  Aligned_cols=196  Identities=17%  Similarity=0.159  Sum_probs=133.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|.++|.+|++++|+.+... .     ...+.+...++.++.+|++|++++++++++.     ++|+
T Consensus        13 TGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDi   86 (258)
T 4gkb_A           13 TGGASGIGGAISMRLAEERAIPVVFARHAPDGA-F-----LDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDG   86 (258)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-H-----HHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-H-----HHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999876521 1     1123334578899999999998888777542     6999


Q ss_pred             EEEcCCCCcc-------------------c----HHHHHHhCC-CCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           76 VYDINGREAD-------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        76 vi~~a~~~~~-------------------~----~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      +||+||....                   +    ++.++..++ +..++|++||...+...   |....|..+|.....+
T Consensus        87 LVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~---~~~~~Y~asKaav~~l  163 (258)
T 4gkb_A           87 LVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQ---GNTSGYCASKGAQLAL  163 (258)
T ss_dssp             EEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCC---SSCHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCC---CCchHHHHHHHHHHHH
Confidence            9999997321                   1    233344444 34689999997654322   2222688899887776


Q ss_pred             HH-------hcCCceEEEecCeeeCCCCCCch-----hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          132 LE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       132 ~~-------~~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      .+       .+|+++..|.||.|-.|......     .......+....++   +     ..+...+|+|.+++.+++..
T Consensus       164 tr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---g-----~R~g~peeiA~~v~fLaS~~  235 (258)
T 4gkb_A          164 TREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL---G-----RRFTTPDEIADTAVFLLSPR  235 (258)
T ss_dssp             HHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT---T-----TSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC---C-----CCCcCHHHHHHHHHHHhCch
Confidence            53       46899999999999876422111     01112222222221   1     13566899999999999763


Q ss_pred             c--cCCceEEecCCcc
Q 021331          200 K--ASRQVFNISGEKY  213 (314)
Q Consensus       200 ~--~~~~~~~i~~~~~  213 (314)
                      .  -.|+.+.+.||.+
T Consensus       236 a~~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          236 ASHTTGEWLFVDGGYT  251 (258)
T ss_dssp             GTTCCSCEEEESTTTT
T ss_pred             hcCccCCeEEECCCcc
Confidence            3  3789999999864

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.53  E-value=1.9e-14  Score=130.37  Aligned_cols=197  Identities=17%  Similarity=0.139  Sum_probs=131.2

Q ss_pred             CCcccccHHHHHHHHHHCCCe-EEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~----~~d~   75 (314)
                      |||+|+||.+++++|.++|++ |++++|+...... . .....+++....++.++.+|++|++++..+++..    .+|+
T Consensus       232 TGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~-~-~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~g~ld~  309 (486)
T 2fr1_A          232 TGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADG-A-GELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSA  309 (486)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTT-H-HHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEE
T ss_pred             ECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHH-H-HHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCcE
Confidence            799999999999999999985 8999998643110 0 0001123333457899999999999999998844    4699


Q ss_pred             EEEcCCCC--------------------cccHHHHHHhCC--CCCcEEEEeecee-eccCCCCCccCccccchhhHHHHH
Q 021331           76 VYDINGRE--------------------ADEVEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCESRHKGKLNTESVL  132 (314)
Q Consensus        76 vi~~a~~~--------------------~~~~~~~~~~~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~k~~~e~~~  132 (314)
                      |||+||..                    ..++.++.+++.  +..+||++||... ++....    ..|..+|...+.+.
T Consensus       310 VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~----~~Yaaaka~l~~la  385 (486)
T 2fr1_A          310 VFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGL----GGYAPGNAYLDGLA  385 (486)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTC----TTTHHHHHHHHHHH
T ss_pred             EEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCC----HHHHHHHHHHHHHH
Confidence            99999963                    233556777766  6789999999644 443322    25888898887665


Q ss_pred             ---HhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEec
Q 021331          133 ---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS  209 (314)
Q Consensus       133 ---~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~  209 (314)
                         +..|+++++|+|+.+.+++....        .. ...+   .  .....+++.+|+++++..++..+..  . +.+.
T Consensus       386 ~~~~~~gi~v~~i~pG~~~~~gm~~~--------~~-~~~~---~--~~g~~~i~~e~~a~~l~~~l~~~~~--~-~~v~  448 (486)
T 2fr1_A          386 QQRRSDGLPATAVAWGTWAGSGMAEG--------PV-ADRF---R--RHGVIEMPPETACRALQNALDRAEV--C-PIVI  448 (486)
T ss_dssp             HHHHHTTCCCEEEEECCBC---------------------C---T--TTTEECBCHHHHHHHHHHHHHTTCS--S-CEEC
T ss_pred             HHHHhcCCeEEEEECCeeCCCcccch--------hH-HHHH---H--hcCCCCCCHHHHHHHHHHHHhCCCC--e-EEEE
Confidence               35789999999999887642110        00 0001   0  1124689999999999999987542  2 2232


Q ss_pred             CCccccHHHHHHHH
Q 021331          210 GEKYVTFDGLARAC  223 (314)
Q Consensus       210 ~~~~~s~~el~~~i  223 (314)
                      .   +.|..+...+
T Consensus       449 ~---~d~~~~~~~~  459 (486)
T 2fr1_A          449 D---VRWDRFLLAY  459 (486)
T ss_dssp             E---ECHHHHHHHH
T ss_pred             e---CCHHHHhhhh
Confidence            2   5666665544

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.53  E-value=1.1e-13  Score=115.00  Aligned_cols=190  Identities=17%  Similarity=0.182  Sum_probs=124.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc----C-CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K-GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~----~-~~d~   75 (314)
                      |||++.||.++++.|.++|++|++++|+....   .            ....++.+|++|+++++.+++.    + ++|+
T Consensus        17 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~---~------------~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   81 (261)
T 4h15_A           17 TAGTKGAGAATVSLFLELGAQVLTTARARPEG---L------------PEELFVEADLTTKEGCAIVAEATRQRLGGVDV   81 (261)
T ss_dssp             SCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT---S------------CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSE
T ss_pred             eccCcHHHHHHHHHHHHcCCEEEEEECCchhC---C------------CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            89999999999999999999999999976541   1            2344788999999888877653    2 6999


Q ss_pred             EEEcCCCCcc----------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      +||+||....                      +    ++.++..+.  +..++|++||........  .....|..+|..
T Consensus        82 lVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~--~~~~~Y~asKaa  159 (261)
T 4h15_A           82 IVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLP--ESTTAYAAAKAA  159 (261)
T ss_dssp             EEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--TTCHHHHHHHHH
T ss_pred             EEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCC--CccHHHHHHHHH
Confidence            9999985210                      0    233444443  557899999965432111  111257888887


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHc--CCCe-------ecCCCCCceeeeeeHHHHHHH
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GRPI-------PIPGSGIQVTQLGHVKDLARA  191 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~~~~~i~~~D~a~~  191 (314)
                      .+.+.+       .+|+++..|.||.|-.|     ....+......  +...       .-.........+...+|+|++
T Consensus       160 l~~lt~~lA~Ela~~gIrVN~V~PG~i~T~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~  234 (261)
T 4h15_A          160 LSTYSKAMSKEVSPKGVRVVRVSPGWIETE-----ASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANL  234 (261)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCCH-----HHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEeCCCcCCc-----chhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHH
Confidence            776653       46899999999988665     22211111100  0000       000000111236678999999


Q ss_pred             HHHHhcCCc--cCCceEEecCCc
Q 021331          192 FVQVLGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       192 ~~~~l~~~~--~~~~~~~i~~~~  212 (314)
                      ++.+++...  -.|+.+.+.||.
T Consensus       235 v~fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          235 IAFLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHhCchhcCccCcEEEECCcC
Confidence            999997533  378899999886

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.52  E-value=5.1e-14  Score=128.11  Aligned_cols=200  Identities=18%  Similarity=0.187  Sum_probs=134.9

Q ss_pred             CCcccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      |||+|+||.+++++|.++|+ +|++++|+...... .. ....++.....++.++.+|++|++++.++++...+|+|||+
T Consensus       265 TGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~-~~-~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld~VVh~  342 (511)
T 2z5l_A          265 TGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPG-AA-ELAEELRGHGCEVVHAACDVAERDALAALVTAYPPNAVFHT  342 (511)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTT-HH-HHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHH-HH-HHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCcEEEEC
Confidence            79999999999999999998 58888987643110 00 00012222345789999999999999999985459999999


Q ss_pred             CCCCc--------------------ccHHHHHHhCC---CCCcEEEEeece-eeccCCCCCccCccccchhhHHHHHH--
Q 021331           80 NGREA--------------------DEVEPILDALP---NLEQFIYCSSAG-VYLKSDLLPHCESRHKGKLNTESVLE--  133 (314)
Q Consensus        80 a~~~~--------------------~~~~~~~~~~~---~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~k~~~e~~~~--  133 (314)
                      ||...                    .++.++.+++.   +..+||++||.. +++...    ...|..+|...+.+.+  
T Consensus       343 AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g----~~~YaaaKa~ld~la~~~  418 (511)
T 2z5l_A          343 AGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAG----QGAYAAANAALDALAERR  418 (511)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTT----BHHHHHHHHHHHHHHHHH
T ss_pred             CcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCC----CHHHHHHHHHHHHHHHHH
Confidence            99632                    23456677665   457899999964 444322    2268999998888764  


Q ss_pred             -hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCc
Q 021331          134 -SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK  212 (314)
Q Consensus       134 -~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~  212 (314)
                       ..|+++++++||.+-+.+.......   ..+..           ....+++.+|+++++..++..+.  . .+.+..  
T Consensus       419 ~~~gi~v~sv~pG~~~~tgm~~~~~~---~~~~~-----------~g~~~l~~e~~a~~l~~al~~~~--~-~v~v~~--  479 (511)
T 2z5l_A          419 RAAGLPATSVAWGLWGGGGMAAGAGE---ESLSR-----------RGLRAMDPDAAVDALLGAMGRND--V-CVTVVD--  479 (511)
T ss_dssp             HTTTCCCEEEEECCBCSTTCCCCHHH---HHHHH-----------HTBCCBCHHHHHHHHHHHHHHTC--S-EEEECC--
T ss_pred             HHcCCcEEEEECCcccCCcccccccH---HHHHh-----------cCCCCCCHHHHHHHHHHHHhCCC--C-EEEEEe--
Confidence             5689999999998744332222111   11110           01246889999999999998654  2 333332  


Q ss_pred             cccHHHHHHHHHHH
Q 021331          213 YVTFDGLARACAKA  226 (314)
Q Consensus       213 ~~s~~el~~~i~~~  226 (314)
                       +.|..+...+...
T Consensus       480 -~d~~~~~~~~~~~  492 (511)
T 2z5l_A          480 -VDWERFAPATNAI  492 (511)
T ss_dssp             -BCHHHHHHHHHHH
T ss_pred             -CCHHHHHhhhccc
Confidence             5677776655543

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.49  E-value=6.5e-14  Score=116.11  Aligned_cols=182  Identities=15%  Similarity=0.132  Sum_probs=120.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecC--CChhhHHHhhhcC-----C
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDR--KDYDFVKSSLSAK-----G   72 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~--~d~~~l~~~~~~~-----~   72 (314)
                      |||+|+||.++++.|+++|++|++++|+........     ..+... ..++.++.+|+  .|++++.++++..     +
T Consensus        20 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~   94 (247)
T 3i1j_A           20 TGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVS-----DQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGR   94 (247)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHH-----HHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999876532111     011111 14677788887  8888887777543     7


Q ss_pred             ccEEEEcCCCCc---------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           73 FDVVYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        73 ~d~vi~~a~~~~---------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      +|++||+||...                     .++..++++    +.  +..++|++||...+...   +....|+.+|
T Consensus        95 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---~~~~~Y~~sK  171 (247)
T 3i1j_A           95 LDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGR---ANWGAYGVSK  171 (247)
T ss_dssp             CSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCC---TTCHHHHHHH
T ss_pred             CCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCC---CCcchhHHHH
Confidence            999999998631                     112233333    33  45689999997654322   2222689999


Q ss_pred             hhHHHHHH-------h-cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          126 LNTESVLE-------S-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       126 ~~~e~~~~-------~-~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      ...+.+.+       . .++++..++||.+..+     +    ........         ....+...+|+|++++.++.
T Consensus       172 ~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~-----~----~~~~~~~~---------~~~~~~~p~dva~~~~~l~s  233 (247)
T 3i1j_A          172 FATEGLMQTLADELEGVTAVRANSINPGATRTG-----M----RAQAYPDE---------NPLNNPAPEDIMPVYLYLMG  233 (247)
T ss_dssp             HHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH-----H----HHHHSTTS---------CGGGSCCGGGGTHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc-----c----chhccccc---------CccCCCCHHHHHHHHHHHhC
Confidence            88877753       2 4788999999887654     1    11111111         11235678999999999997


Q ss_pred             CCc--cCCceEEe
Q 021331          198 NEK--ASRQVFNI  208 (314)
Q Consensus       198 ~~~--~~~~~~~i  208 (314)
                      ...  ..|+.+++
T Consensus       234 ~~~~~itG~~i~~  246 (247)
T 3i1j_A          234 PDSTGINGQALNA  246 (247)
T ss_dssp             GGGTTCCSCEEEC
T ss_pred             chhccccCeeecC
Confidence            532  25666654

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.46  E-value=3.8e-14  Score=117.28  Aligned_cols=189  Identities=14%  Similarity=0.132  Sum_probs=115.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEE-E--cCCcccccCCCCCCchhhhhccCceEEEEecCCChhh-HHHhhhcC-CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLF-T--RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF-VKSSLSAK-GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-l~~~~~~~-~~d~   75 (314)
                      |||+|+||.++++.|+++|++|+++ +  |+.+.......        +. .+..+.  |..+.+. ++++.+.. ++|+
T Consensus         7 TGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~--------~~-~~~~~~--~~~~v~~~~~~~~~~~g~iD~   75 (244)
T 1zmo_A            7 THARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFES--------EN-PGTIAL--AEQKPERLVDATLQHGEAIDT   75 (244)
T ss_dssp             SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH--------HS-TTEEEC--CCCCGGGHHHHHGGGSSCEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHH--------Hh-CCCccc--CHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999 5  87654221100        00 122222  3333222 22222222 6999


Q ss_pred             EEEcCCCCcc---c--------------------HHH----HHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchh
Q 021331           76 VYDINGREAD---E--------------------VEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKL  126 (314)
Q Consensus        76 vi~~a~~~~~---~--------------------~~~----~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~  126 (314)
                      +||+||....   .                    +..    ++..+.  +..++|++||...+...   +....|..+|.
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---~~~~~Y~asK~  152 (244)
T 1zmo_A           76 IVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL---AYNPLYGPARA  152 (244)
T ss_dssp             EEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC---TTCTTHHHHHH
T ss_pred             EEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCC---CCchHHHHHHH
Confidence            9999985422   1                    122    333332  45789999997765432   22236999998


Q ss_pred             hHHHHHH-------hcCCceEEEecCeeeCCCCC--Cchh-HHHHHHHHc-CCCeecCCCCCceeeeeeHHHHHHHHHHH
Q 021331          127 NTESVLE-------SKGVNWTSLRPVYIYGPLNY--NPVE-EWFFHRLKA-GRPIPIPGSGIQVTQLGHVKDLARAFVQV  195 (314)
Q Consensus       127 ~~e~~~~-------~~~~~~~ilR~~~v~g~~~~--~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  195 (314)
                      ..+.+.+       .+++++++++||.+..+...  .... ......... ..+  .       ..+.+.+|+|++++.+
T Consensus       153 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p--~-------~r~~~pe~vA~~v~~l  223 (244)
T 1zmo_A          153 ATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVP--L-------GRLGRPDEMGALITFL  223 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCT--T-------CSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCC--C-------CCCcCHHHHHHHHHHH
Confidence            8877753       35899999999998776320  1000 011111111 111  1       1367899999999999


Q ss_pred             hcCCc--cCCceEEecCCc
Q 021331          196 LGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       196 l~~~~--~~~~~~~i~~~~  212 (314)
                      +....  ..|..+.+.++.
T Consensus       224 ~s~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          224 ASRRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             HTTTTGGGTTCEEEESTTC
T ss_pred             cCccccCccCCEEEeCCCC
Confidence            98643  368899998874

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.46  E-value=9.7e-14  Score=124.64  Aligned_cols=192  Identities=15%  Similarity=0.090  Sum_probs=124.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC------Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~------~~d   74 (314)
                      |||+|.||.++++.|.++|++|++++|+.....  +.    ....  ..++.++.+|++|+++++++++..      .+|
T Consensus       219 TGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~--l~----~~~~--~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id  290 (454)
T 3u0b_A          219 TGAARGIGATIAEVFARDGATVVAIDVDGAAED--LK----RVAD--KVGGTALTLDVTADDAVDKITAHVTEHHGGKVD  290 (454)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHH--HH----HHHH--HHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred             eCCchHHHHHHHHHHHHCCCEEEEEeCCccHHH--HH----HHHH--HcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence            899999999999999999999999998643210  00    0000  135678999999999888877642      399


Q ss_pred             EEEEcCCCCc--------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +|||+||...                    .++.++.++    +.  +..+||++||...+.....   ...|..+|...
T Consensus       291 ~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g---~~~YaasKaal  367 (454)
T 3u0b_A          291 ILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRG---QTNYATTKAGM  367 (454)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTT---CHHHHHHHHHH
T ss_pred             EEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCC---CHHHHHHHHHH
Confidence            9999999742                    123334443    22  4568999999665433221   12689999866


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      +.+.+       ..|++++.++||.+..+.... .............  +       ...+...+|+|++++.++.... 
T Consensus       368 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~--~-------l~r~g~pedvA~~v~fL~s~~a~  437 (454)
T 3u0b_A          368 IGLAEALAPVLADKGITINAVAPGFIETKMTEA-IPLATREVGRRLN--S-------LFQGGQPVDVAELIAYFASPASN  437 (454)
T ss_dssp             HHHHHHHHHHHHTTTCEEEEEEECSBCC-----------CHHHHHSB--T-------TSSCBCHHHHHHHHHHHHCGGGT
T ss_pred             HHHHHHHHHHhhhcCcEEEEEEcCcccChhhhh-cchhhHHHHHhhc--c-------ccCCCCHHHHHHHHHHHhCCccC
Confidence            55542       368999999999998763211 0000000011101  1       1234578999999999997532 


Q ss_pred             -cCCceEEecCCcc
Q 021331          201 -ASRQVFNISGEKY  213 (314)
Q Consensus       201 -~~~~~~~i~~~~~  213 (314)
                       ..|+++++.++..
T Consensus       438 ~itG~~i~vdGG~~  451 (454)
T 3u0b_A          438 AVTGNTIRVCGQAM  451 (454)
T ss_dssp             TCCSCEEEESSSBS
T ss_pred             CCCCcEEEECCccc
Confidence             3788999988764

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.45  E-value=4.7e-13  Score=114.62  Aligned_cols=180  Identities=15%  Similarity=0.114  Sum_probs=119.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecCCCh-hhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDY-DFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~-~~l~~~~~~~-----~~   73 (314)
                      |||+|+||.++++.|+++|++|++++|+.........     .+.+. ..++.++.+|++|+ +.+..+++..     ++
T Consensus        18 TGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~i   92 (311)
T 3o26_A           18 TGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVE-----KLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKL   92 (311)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSC
T ss_pred             ecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCC
Confidence            8999999999999999999999999998765321110     11111 24789999999998 7776666532     79


Q ss_pred             cEEEEcCCCCc--------------------------------------------------cc----HHHHHHhCC--CC
Q 021331           74 DVVYDINGREA--------------------------------------------------DE----VEPILDALP--NL   97 (314)
Q Consensus        74 d~vi~~a~~~~--------------------------------------------------~~----~~~~~~~~~--~~   97 (314)
                      |++||+||...                                                  .+    ++.++..+.  +.
T Consensus        93 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~  172 (311)
T 3o26_A           93 DILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDS  172 (311)
T ss_dssp             CEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS
T ss_pred             CEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCCC
Confidence            99999999641                                                  11    223333343  45


Q ss_pred             CcEEEEeeceeeccCC---------------------------------------C-CCccCccccchhhHHHHHHh---
Q 021331           98 EQFIYCSSAGVYLKSD---------------------------------------L-LPHCESRHKGKLNTESVLES---  134 (314)
Q Consensus        98 ~~~i~~Ss~~v~~~~~---------------------------------------~-~~~~e~~~~~k~~~e~~~~~---  134 (314)
                      .++|++||...+....                                       . .+....|+.+|...+.+.+.   
T Consensus       173 ~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~  252 (311)
T 3o26_A          173 PRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLAN  252 (311)
T ss_dssp             CEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHHHh
Confidence            7999999966542210                                       0 01112699999988887642   


Q ss_pred             --cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCcc-CCceEEecC
Q 021331          135 --KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA-SRQVFNISG  210 (314)
Q Consensus       135 --~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~~~~i~~  210 (314)
                        .++.+..++||.|..+...              .           ......++.++.++.++..+.. .+..|...+
T Consensus       253 e~~~i~v~~v~PG~v~T~~~~--------------~-----------~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~s  306 (311)
T 3o26_A          253 KIPKFQVNCVCPGLVKTEMNY--------------G-----------IGNYTAEEGAEHVVRIALFPDDGPSGFFYDCS  306 (311)
T ss_dssp             HCTTSEEEEECCCSBCSGGGT--------------T-----------CCSBCHHHHHHHHHHHHTCCSSCCCSCEETC-
T ss_pred             hcCCceEEEecCCceecCCcC--------------C-----------CCCCCHHHHHHHHHHHHhCCCCCCCceEeccc
Confidence              2588999999988765110              0           0124678999999988876432 334454443

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.45  E-value=3.5e-14  Score=118.58  Aligned_cols=194  Identities=15%  Similarity=0.110  Sum_probs=118.9

Q ss_pred             CCcccccHHHHHHHHHH---CCCeEEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCChhhHHHhhhcC----
Q 021331            1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK----   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~----   71 (314)
                      |||+|+||.++++.|++   +|++|++++|+.+......     ..+...  ..++.++.+|++|++++.++++..    
T Consensus        12 TGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (259)
T 1oaa_A           12 TGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLK-----EELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP   86 (259)
T ss_dssp             SSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHH-----HHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred             eCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHH-----HHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhcc
Confidence            89999999999999999   8999999999865422111     011111  246889999999999888877532    


Q ss_pred             ---Ccc--EEEEcCCCCc---------cc------------------HHHHHHhCCC----CCcEEEEeeceeeccCCCC
Q 021331           72 ---GFD--VVYDINGREA---------DE------------------VEPILDALPN----LEQFIYCSSAGVYLKSDLL  115 (314)
Q Consensus        72 ---~~d--~vi~~a~~~~---------~~------------------~~~~~~~~~~----~~~~i~~Ss~~v~~~~~~~  115 (314)
                         ++|  ++||+||...         ..                  ++.++..+..    ..++|++||...+...   
T Consensus        87 ~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---  163 (259)
T 1oaa_A           87 RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY---  163 (259)
T ss_dssp             CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC---
T ss_pred             ccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCC---
Confidence               357  9999998631         11                  1223333332    2579999997765332   


Q ss_pred             CccCccccchhhHHHHHHh----c-CCceEEEecCeeeCCCCCCchhHHHHHHHHcCCC-eecCCCCCceeeeeeHHHHH
Q 021331          116 PHCESRHKGKLNTESVLES----K-GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLA  189 (314)
Q Consensus       116 ~~~e~~~~~k~~~e~~~~~----~-~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a  189 (314)
                      +....|+.+|...+.+.+.    . ++++..++||.+-.+     +........ .... ............+.+++|+|
T Consensus       164 ~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~-----~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~p~dvA  237 (259)
T 1oaa_A          164 KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND-----MQQLARETS-KDPELRSKLQKLKSDGALVDCGTSA  237 (259)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH-----HHHHHHHHC-SCHHHHHHHHHHHHTTCSBCHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcc-----hHHHHhhcc-CChhHHHHHHHhhhcCCcCCHHHHH
Confidence            2223699999888887642    2 378888899876544     221111000 0000 00000000012467899999


Q ss_pred             HHHHHHhcCCc-cCCceEEe
Q 021331          190 RAFVQVLGNEK-ASRQVFNI  208 (314)
Q Consensus       190 ~~~~~~l~~~~-~~~~~~~i  208 (314)
                      ++++.++.... ..|..+++
T Consensus       238 ~~v~~l~~~~~~itG~~i~v  257 (259)
T 1oaa_A          238 QKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHHHHCCSCTTEEEET
T ss_pred             HHHHHHHhhccccCCcEEec
Confidence            99999987432 24555554

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.40  E-value=5.1e-13  Score=115.25  Aligned_cols=143  Identities=17%  Similarity=0.120  Sum_probs=102.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh------ccCceEEEEecCCChhhHHHhhhcC---
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE------FSSKILHLKGDRKDYDFVKSSLSAK---   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~D~~d~~~l~~~~~~~---   71 (314)
                      |||+|+||.++++.|+++|++|++++|+........     ..+..      ...++.++.+|++|++++.++++..   
T Consensus         8 TGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~g   82 (327)
T 1jtv_A            8 TGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQG-----RLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (327)
T ss_dssp             SCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTH-----HHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             ECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHH-----HHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhcC
Confidence            899999999999999999999998887654322110     01111      0256889999999999999998743   


Q ss_pred             CccEEEEcCCCCc--------------------ccHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           72 GFDVVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        72 ~~d~vi~~a~~~~--------------------~~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      ++|++||+||...                    .++.+++++    +.  +..+||++||...+...   +....|..+|
T Consensus        83 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~---~~~~~Y~aSK  159 (327)
T 1jtv_A           83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL---PFNDVYCASK  159 (327)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC---TTCHHHHHHH
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC---CCChHHHHHH
Confidence            4999999998631                    122334444    33  56799999997665322   2233699999


Q ss_pred             hhHHHHHH-------hcCCceEEEecCeeeCCC
Q 021331          126 LNTESVLE-------SKGVNWTSLRPVYIYGPL  151 (314)
Q Consensus       126 ~~~e~~~~-------~~~~~~~ilR~~~v~g~~  151 (314)
                      ...+.+.+       ..++++++|+||.|..+.
T Consensus       160 ~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~  192 (327)
T 1jtv_A          160 FALEGLCESLAVLLLPFGVHLSLIECGPVHTAF  192 (327)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence            98887763       368999999999998763

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.40  E-value=1.8e-12  Score=117.20  Aligned_cols=181  Identities=18%  Similarity=0.150  Sum_probs=124.0

Q ss_pred             CCcccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~----~~d~   75 (314)
                      |||+|+||.++++.|.++|+ +|++++|+...... . ......++....++.++.+|++|++++.++++..    .+|+
T Consensus       245 TGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~-~-~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~ld~  322 (496)
T 3mje_A          245 TGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPG-A-AELRAELEQLGVRVTIAACDAADREALAALLAELPEDAPLTA  322 (496)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTT-H-HHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSCEEE
T ss_pred             ECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHH-H-HHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCCCeE
Confidence            79999999999999999998 78888887533110 0 0011233334567999999999999999998753    5899


Q ss_pred             EEEcCCCC---------------------cccHHHHHHhCC--CCCcEEEEeecee-eccCCCCCccCccccchhhHHHH
Q 021331           76 VYDINGRE---------------------ADEVEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        76 vi~~a~~~---------------------~~~~~~~~~~~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      |||+||..                     ..++.++.+++.  ...+||++||... ++...    ...|..+|...+.+
T Consensus       323 vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g----~~~YaAaKa~ldal  398 (496)
T 3mje_A          323 VFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGG----QPGYAAANAYLDAL  398 (496)
T ss_dssp             EEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTT----CHHHHHHHHHHHHH
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCC----cHHHHHHHHHHHHH
Confidence            99999864                     123556677666  5678999999554 33322    22689999888776


Q ss_pred             HH---hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          132 LE---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       132 ~~---~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      .+   ..|++++.|.||.+.+++....  ......+...           -...+..++.++++..++..+.
T Consensus       399 a~~~~~~Gi~v~sV~pG~w~~~gm~~~--~~~~~~l~~~-----------g~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          399 AEHRRSLGLTASSVAWGTWGEVGMATD--PEVHDRLVRQ-----------GVLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHTTCCCEEEEECEESSSCC--------CHHHHHT-----------TEEEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHhcCCeEEEEECCcccCCccccC--hHHHHHHHhc-----------CCCCCCHHHHHHHHHHHHcCCC
Confidence            54   5789999999999877653211  0011111111           1345678999999999998654

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.35  E-value=2.2e-12  Score=110.82  Aligned_cols=181  Identities=13%  Similarity=0.104  Sum_probs=116.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCc---------ccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKA---------PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-   70 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-   70 (314)
                      |||+|+||.++++.|+++|++|+++++...         .....     ...+...  + ....+|+.+.+++.++++. 
T Consensus        15 TGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~-----~~~l~~~--~-~~~~~D~~~~~~~~~~~~~~   86 (319)
T 1gz6_A           15 TGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKV-----VEEIRRR--G-GKAVANYDSVEAGEKLVKTA   86 (319)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHH-----HHHHHHT--T-CEEEEECCCGGGHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHH-----HHHHHhh--C-CeEEEeCCCHHHHHHHHHHH
Confidence            899999999999999999999999876421         11000     0111111  1 1235899998876665542 


Q ss_pred             ---C-CccEEEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeece-eeccCCCCCccC
Q 021331           71 ---K-GFDVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAG-VYLKSDLLPHCE  119 (314)
Q Consensus        71 ---~-~~d~vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~-v~~~~~~~~~~e  119 (314)
                         . ++|++||+||....                    +    ++.++..+.  +..+||++||.. .++...    ..
T Consensus        87 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~----~~  162 (319)
T 1gz6_A           87 LDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG----QA  162 (319)
T ss_dssp             HHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT----CH
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC----CH
Confidence               2 69999999986321                    1    222333333  567999999964 444322    22


Q ss_pred             ccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHH
Q 021331          120 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  192 (314)
Q Consensus       120 ~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  192 (314)
                      .|+.+|...+.+.+       .+++++++++|+.+ .+.. .....                  .....+++.+|+|.++
T Consensus       163 ~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~-~~~~~------------------~~~~~~~~p~dvA~~~  222 (319)
T 1gz6_A          163 NYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMT-ETVMP------------------EDLVEALKPEYVAPLV  222 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTT-GGGSC------------------HHHHHHSCGGGTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccc-cccCC------------------hhhhccCCHHHHHHHH
Confidence            68999988877653       35899999999876 3311 00000                  0112346789999999


Q ss_pred             HHHhcCCcc-CCceEEecCCcc
Q 021331          193 VQVLGNEKA-SRQVFNISGEKY  213 (314)
Q Consensus       193 ~~~l~~~~~-~~~~~~i~~~~~  213 (314)
                      +.++..+.. .|++|++.++..
T Consensus       223 ~~l~s~~~~~tG~~~~v~GG~~  244 (319)
T 1gz6_A          223 LWLCHESCEENGGLFEVGAGWI  244 (319)
T ss_dssp             HHHTSTTCCCCSCEEEEETTEE
T ss_pred             HHHhCchhhcCCCEEEECCCeE
Confidence            999876432 688999988853

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.32  E-value=3.8e-11  Score=102.15  Aligned_cols=200  Identities=10%  Similarity=-0.033  Sum_probs=118.0

Q ss_pred             CCcc--cccHHHHHHHHHHCCCeEEEEEcCCcc------c-ccCCCCCCchhhhhcc--CceEEEEec--------C---
Q 021331            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAP------I-AQQLPGESDQEFAEFS--SKILHLKGD--------R---   58 (314)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~------~-~~~~~~~~~~~~~~~~--~~~~~~~~D--------~---   58 (314)
                      |||+  |+||.++++.|+++|++|++++|++..      . ...+.. . ..+....  .....+.+|        +   
T Consensus        14 TGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~dv~~D   91 (297)
T 1d7o_A           14 AGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQ-S-RVLPDGSLMEIKKVYPLDAVFDNPEDVPED   91 (297)
T ss_dssp             ECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTG-G-GBCTTSSBCCEEEEEEECTTCCSGGGSCHH
T ss_pred             ECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhh-h-hhhccccccccccccccceeccchhhhhhh
Confidence            7998  999999999999999999999864210      0 000000 0 0000000  012333333        2   


Q ss_pred             -CC--------hhhHHHhhhcC-----CccEEEEcCCCCc----------------------ccHHHHHHhCC----CCC
Q 021331           59 -KD--------YDFVKSSLSAK-----GFDVVYDINGREA----------------------DEVEPILDALP----NLE   98 (314)
Q Consensus        59 -~d--------~~~l~~~~~~~-----~~d~vi~~a~~~~----------------------~~~~~~~~~~~----~~~   98 (314)
                       +|        +++++++++..     ++|++||+||...                      .++..+++++.    ...
T Consensus        92 v~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g  171 (297)
T 1d7o_A           92 VKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGG  171 (297)
T ss_dssp             HHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE
T ss_pred             hhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCc
Confidence             22        44555554322     6999999997421                      11223334432    236


Q ss_pred             cEEEEeeceeeccCCCCCccCccccchhhHHHHHH--------hcCCceEEEecCeeeCCCCCCc-hhHHHHHHHHcCCC
Q 021331           99 QFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRP  169 (314)
Q Consensus        99 ~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~--------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~  169 (314)
                      ++|++||...+.....  ....|+.+|...+.+.+        .+|+++..++||.+.++..... ....+........+
T Consensus       172 ~iv~isS~~~~~~~~~--~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p  249 (297)
T 1d7o_A          172 ASISLTYIASERIIPG--YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAP  249 (297)
T ss_dssp             EEEEEECGGGTSCCTT--CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSS
T ss_pred             eEEEEeccccccCCCC--cchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHHHHHhhccCC
Confidence            8999999765432211  11258999988777652        2689999999999999854321 22222232222221


Q ss_pred             eecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cCCceEEecCCcc
Q 021331          170 IPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKY  213 (314)
Q Consensus       170 ~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~~~~~~i~~~~~  213 (314)
                      +         ..+.+++|+|++++.++....  ..|+++++.++..
T Consensus       250 ~---------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~  286 (297)
T 1d7o_A          250 I---------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             S---------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             C---------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCce
Confidence            1         135678999999999987532  3688999998853

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.29  E-value=1.1e-11  Score=113.20  Aligned_cols=200  Identities=15%  Similarity=0.070  Sum_probs=126.5

Q ss_pred             CCcccccHHHHHHHHHHCCCe-EEEE-EcCCcccc--------cCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQ-VTLF-TRGKAPIA--------QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA   70 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~~-~r~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~   70 (314)
                      |||+|.||.++++.|.++|+. |+++ +|+.....        ..-.......++....++.++.+|++|++++.++++.
T Consensus       257 TGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~  336 (525)
T 3qp9_A          257 TGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEAAARLLAG  336 (525)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHT
T ss_pred             ECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHHHHHHHHH
Confidence            899999999999999999987 5555 67642200        0000001123334456799999999999999999875


Q ss_pred             C----CccEEEEcCCCCc--------------------ccHHHHHHhCC------C-CCcEEEEeeceeeccCCCCCccC
Q 021331           71 K----GFDVVYDINGREA--------------------DEVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCE  119 (314)
Q Consensus        71 ~----~~d~vi~~a~~~~--------------------~~~~~~~~~~~------~-~~~~i~~Ss~~v~~~~~~~~~~e  119 (314)
                      .    .+|+|||+||...                    .++.++.+++.      + ..+||++||...+-...   -..
T Consensus       337 i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~---g~~  413 (525)
T 3qp9_A          337 VSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGA---GQG  413 (525)
T ss_dssp             SCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCCT---TCH
T ss_pred             HHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCCC---CCH
Confidence            3    5899999999732                    22344555433      1 67899999965542221   122


Q ss_pred             ccccchhhHHHHHH---hcCCceEEEecCeeeCCCCC-CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHH
Q 021331          120 SRHKGKLNTESVLE---SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  195 (314)
Q Consensus       120 ~~~~~k~~~e~~~~---~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  195 (314)
                      .|..+|...+.+..   ..|++++.|.||.+ +.+.. ...   ....+...      +     ...+..+++++++..+
T Consensus       414 ~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~-~tgm~~~~~---~~~~~~~~------g-----~~~l~pee~a~~l~~~  478 (525)
T 3qp9_A          414 AYAAGTAFLDALAGQHRADGPTVTSVAWSPW-EGSRVTEGA---TGERLRRL------G-----LRPLAPATALTALDTA  478 (525)
T ss_dssp             HHHHHHHHHHHHHTSCCSSCCEEEEEEECCB-TTSGGGSSH---HHHHHHHT------T-----BCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEEEECCcc-ccccccchh---hHHHHHhc------C-----CCCCCHHHHHHHHHHH
Confidence            69999998888864   45899999999988 32211 111   11111111      1     2357789999999999


Q ss_pred             hcCCccCCceEEecCCccccHHHHHHHHH
Q 021331          196 LGNEKASRQVFNISGEKYVTFDGLARACA  224 (314)
Q Consensus       196 l~~~~~~~~~~~i~~~~~~s~~el~~~i~  224 (314)
                      +..+.  . ...+.   .+.|..+...+.
T Consensus       479 l~~~~--~-~v~v~---~~dw~~~~~~~~  501 (525)
T 3qp9_A          479 LGHGD--T-AVTIA---DVDWSSFAPGFT  501 (525)
T ss_dssp             HHHTC--S-EEEEC---CBCHHHHHHHHH
T ss_pred             HhCCC--C-eEEEE---eCCHHHHHhhcc
Confidence            98654  2 22232   255665555443

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.26  E-value=9.5e-13  Score=113.55  Aligned_cols=142  Identities=13%  Similarity=0.120  Sum_probs=96.2

Q ss_pred             CCcccccHHHHHHHHHHCCC-------eEEEEEcCCc--ccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKA--PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~   71 (314)
                      |||+||+|++++..|+++|+       +|+++++...  ......     ..+.  +..+.++ .|+.+.+.+.++++  
T Consensus        10 tGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~-----~dl~--~~~~~~~-~di~~~~~~~~a~~--   79 (327)
T 1y7t_A           10 TGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVV-----MELE--DCAFPLL-AGLEATDDPKVAFK--   79 (327)
T ss_dssp             SSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHH-----HHHH--TTTCTTE-EEEEEESCHHHHTT--
T ss_pred             ECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchh-----hhhh--ccccccc-CCeEeccChHHHhC--
Confidence            79999999999999999986       8999987642  100000     0000  1112333 67777677888888  


Q ss_pred             CccEEEEcCCCC--------------cccHHHHHHhCC--C-CC-cEEEEeece---ee--ccCC-CCCccCccccchhh
Q 021331           72 GFDVVYDINGRE--------------ADEVEPILDALP--N-LE-QFIYCSSAG---VY--LKSD-LLPHCESRHKGKLN  127 (314)
Q Consensus        72 ~~d~vi~~a~~~--------------~~~~~~~~~~~~--~-~~-~~i~~Ss~~---v~--~~~~-~~~~~e~~~~~k~~  127 (314)
                      ++|+|||+|+..              ..+++++++++.  + .+ +++++|+..   .+  .... ..+....|+.+|..
T Consensus        80 ~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~tkl~  159 (327)
T 1y7t_A           80 DADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLD  159 (327)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHH
T ss_pred             CCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccchHH
Confidence            999999999863              334777888876  3 43 777777643   11  1111 12222369999998


Q ss_pred             HHHHH----HhcCCceEEEecCeeeCCCC
Q 021331          128 TESVL----ESKGVNWTSLRPVYIYGPLN  152 (314)
Q Consensus       128 ~e~~~----~~~~~~~~ilR~~~v~g~~~  152 (314)
                      .|++.    +.++++.+++|++.||||+.
T Consensus       160 ~er~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          160 HNRAKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             HHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             HHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence            88865    45689999999999999965

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.22  E-value=1.1e-10  Score=100.72  Aligned_cols=197  Identities=9%  Similarity=-0.025  Sum_probs=120.2

Q ss_pred             CCccc--ccHHHHHHHHHHCCCeEEEEEcCC---------ccc---ccCCCCCCchhhhhccCceEEEEecCCCh--h--
Q 021331            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGK---------API---AQQLPGESDQEFAEFSSKILHLKGDRKDY--D--   62 (314)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~---------~~~---~~~~~~~~~~~~~~~~~~~~~~~~D~~d~--~--   62 (314)
                      |||++  .||.++++.|+++|++|++.+|++         +..   ......     .......+.++.+|+.+.  +  
T Consensus         8 TGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~~~Dv~~~~~~~~   82 (329)
T 3lt0_A            8 AGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIID-----KDKKMNILDMLPFDASFDTANDI   82 (329)
T ss_dssp             ECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCS-----SSCBCCEEEEEECCTTCSSGGGC
T ss_pred             ECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHh-----hcccccccccccccccccchhhh
Confidence            68764  999999999999999999877654         110   000000     000123477888888876  6  


Q ss_pred             ----------------hHHHhhhcC-----CccEEEEcCCCCc----------------------cc----HHHHHHhCC
Q 021331           63 ----------------FVKSSLSAK-----GFDVVYDINGREA----------------------DE----VEPILDALP   95 (314)
Q Consensus        63 ----------------~l~~~~~~~-----~~d~vi~~a~~~~----------------------~~----~~~~~~~~~   95 (314)
                                      ++.++++..     ++|++||+||...                      .+    ++.++..+.
T Consensus        83 ~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~  162 (329)
T 3lt0_A           83 DEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMK  162 (329)
T ss_dssp             CHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred             hhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence                            666665432     6999999998521                      11    222333333


Q ss_pred             CCCcEEEEeeceeeccCCCCCcc-CccccchhhHHHHHH-------h-cCCceEEEecCeeeCCCCCCc-----------
Q 021331           96 NLEQFIYCSSAGVYLKSDLLPHC-ESRHKGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYNP-----------  155 (314)
Q Consensus        96 ~~~~~i~~Ss~~v~~~~~~~~~~-e~~~~~k~~~e~~~~-------~-~~~~~~ilR~~~v~g~~~~~~-----------  155 (314)
                      ...++|++||...+...   |.. ..|..+|...+.+.+       . +++.+..+.||.|..+.....           
T Consensus       163 ~~g~Iv~isS~~~~~~~---~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  239 (329)
T 3lt0_A          163 PQSSIISLTYHASQKVV---PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNT  239 (329)
T ss_dssp             EEEEEEEEECGGGTSCC---TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC----------
T ss_pred             hCCeEEEEeCccccCCC---CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhcccccccc
Confidence            22689999996654322   222 258999987776652       3 689999999998865411000           


Q ss_pred             ---------------------------------hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC--c
Q 021331          156 ---------------------------------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--K  200 (314)
Q Consensus       156 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~--~  200 (314)
                                                       +...+........+         ...+...+|+|++++.++...  .
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~peevA~~v~fL~s~~a~~  310 (329)
T 3lt0_A          240 NQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAP---------LRQKLLSTDIGSVASFLLSRESRA  310 (329)
T ss_dssp             --------------------------------CHHHHHHHHHHHHSS---------SCSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             cccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCc---------ccCcCCHHHHHHHHHHHhCchhcc
Confidence                                             00000111111111         123567899999999999753  2


Q ss_pred             cCCceEEecCCccc
Q 021331          201 ASRQVFNISGEKYV  214 (314)
Q Consensus       201 ~~~~~~~i~~~~~~  214 (314)
                      ..|..+.+.||..+
T Consensus       311 itG~~i~vdGG~~~  324 (329)
T 3lt0_A          311 ITGQTIYVDNGLNI  324 (329)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             ccCcEEEEcCCeeE
Confidence            37889999998653

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.12  E-value=7e-11  Score=110.14  Aligned_cols=185  Identities=11%  Similarity=0.022  Sum_probs=106.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCC----CchhhhhccCceEEEEecCCChhhHHHhhhcC-----
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE----SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----   71 (314)
                      |||+|+||.++++.|+++|++|++++|............    ....+.....   ...+|+.|.+++.++++..     
T Consensus        25 TGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~D~~d~~~~~~~~~~~~~~~g  101 (613)
T 3oml_A           25 TGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG---EAVADYNSVIDGAKVIETAIKAFG  101 (613)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC---CEEECCCCGGGHHHHHC-------
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC---eEEEEeCCHHHHHHHHHHHHHHCC
Confidence            899999999999999999999999988321100000000    0011111111   2347999988887777543     


Q ss_pred             CccEEEEcCCCCcc--------------------cHHHHHHh----CC--CCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           72 GFDVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        72 ~~d~vi~~a~~~~~--------------------~~~~~~~~----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      ++|++||+||....                    ++.++.++    +.  +..++|++||...+....   ....|+.+|
T Consensus       102 ~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~---~~~~Y~asK  178 (613)
T 3oml_A          102 RVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNF---GQVNYTAAK  178 (613)
T ss_dssp             ---CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCT---TCHHHHHHH
T ss_pred             CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC---CChHHHHHH
Confidence            58999999997321                    12233333    33  456999999965432211   122589999


Q ss_pred             hhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          126 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       126 ~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      ...+.+.+       .+++.+..+.|+.+ .+......                   .......+..+|+|.+++.++..
T Consensus       179 aal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~-------------------~~~~~~~~~pedvA~~v~~L~s~  238 (613)
T 3oml_A          179 MGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGIL-------------------PDILFNELKPKLIAPVVAYLCHE  238 (613)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCC-------------------CHHHHTTCCGGGTHHHHHHTTST
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhcc-------------------chhhhhcCCHHHHHHHHHHhcCC
Confidence            88777653       35799999999753 11000000                   00112334789999999999876


Q ss_pred             Cc-cCCceEEecCC
Q 021331          199 EK-ASRQVFNISGE  211 (314)
Q Consensus       199 ~~-~~~~~~~i~~~  211 (314)
                      .. ..|+++++.+|
T Consensus       239 ~~~~tG~~i~vdGG  252 (613)
T 3oml_A          239 SCEDNGSYIESAAG  252 (613)
T ss_dssp             TCCCCSCEEEEETT
T ss_pred             CcCCCceEEEECCC
Confidence            52 26778888765

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.11  E-value=6e-10  Score=95.54  Aligned_cols=200  Identities=14%  Similarity=0.027  Sum_probs=114.2

Q ss_pred             CCc--ccccHHHHHHHHHHCCCeEEEEEcCCc-------ccccCCCCCCchhhhhcc--CceEEEEec------------
Q 021331            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKA-------PIAQQLPGESDQEFAEFS--SKILHLKGD------------   57 (314)
Q Consensus         1 tGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~--~~~~~~~~D------------   57 (314)
                      |||  +|+||.++++.|+++|++|++++|++.       .....+..  ...+....  ..+.++.+|            
T Consensus        15 TGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D   92 (315)
T 2o2s_A           15 AGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDE--DRKLPDGSLIEFAGVYPLDAAFDKPEDVPQD   92 (315)
T ss_dssp             ECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHH--HHBCTTSCBCCCSCEEECCTTCSSTTSSCHH
T ss_pred             eCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhh--hhhhhccccccccccccccccccccchhhhh
Confidence            688  899999999999999999999987531       00000000  00000000  012344443            


Q ss_pred             CCC--------hhhHHHhhhcC-----CccEEEEcCCCCc----------------------ccHHHHHHhCC----CCC
Q 021331           58 RKD--------YDFVKSSLSAK-----GFDVVYDINGREA----------------------DEVEPILDALP----NLE   98 (314)
Q Consensus        58 ~~d--------~~~l~~~~~~~-----~~d~vi~~a~~~~----------------------~~~~~~~~~~~----~~~   98 (314)
                      ++|        ++++..+++..     ++|++||+||...                      .++..+.+++.    ...
T Consensus        93 v~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g  172 (315)
T 2o2s_A           93 IKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGG  172 (315)
T ss_dssp             HHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEEE
T ss_pred             hhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC
Confidence            332        44555555422     6999999998531                      11223444433    226


Q ss_pred             cEEEEeeceeeccCCCCCccCccccchhhHHHHHH--------hcCCceEEEecCeeeCCCCC-------CchhHHHHHH
Q 021331           99 QFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNY-------NPVEEWFFHR  163 (314)
Q Consensus        99 ~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~--------~~~~~~~ilR~~~v~g~~~~-------~~~~~~~~~~  163 (314)
                      ++|++||...+.....  ....|+.+|...+.+.+        .+|+++..|+||.|..+...       ..+...+...
T Consensus       173 ~Iv~isS~~~~~~~~~--~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  250 (315)
T 2o2s_A          173 SAVTLSYLAAERVVPG--YGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDY  250 (315)
T ss_dssp             EEEEEEEGGGTSCCTT--CCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCHHHHHHHH
T ss_pred             EEEEEecccccccCCC--ccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccchhHHHHHHH
Confidence            8999999765432211  11258899987776652        26899999999988664100       0011111111


Q ss_pred             HHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cCCceEEecCCcc
Q 021331          164 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKY  213 (314)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~~~~~~i~~~~~  213 (314)
                      .....+  +       ..+...+|+|++++.++....  ..|..+.+.++..
T Consensus       251 ~~~~~p--~-------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  293 (315)
T 2o2s_A          251 SYNNAP--L-------RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLH  293 (315)
T ss_dssp             HHHHSS--S-------CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HhccCC--C-------CCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCee
Confidence            111111  1       135678999999999987532  3688999988853

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.09  E-value=3.3e-10  Score=97.30  Aligned_cols=209  Identities=12%  Similarity=-0.026  Sum_probs=99.1

Q ss_pred             CCc--ccccHHHHHHHHHHCCCeEEEEEcCC-----------ccccc--CCCC----CCchhhhhccC---ceEEEEecC
Q 021331            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGK-----------APIAQ--QLPG----ESDQEFAEFSS---KILHLKGDR   58 (314)
Q Consensus         1 tGa--tG~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~--~~~~----~~~~~~~~~~~---~~~~~~~D~   58 (314)
                      |||  +|+||.++++.|+++|++|++++|++           +....  .+..    ....++.....   ...++.+|+
T Consensus        15 TGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   94 (319)
T 2ptg_A           15 AGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDKIYPLDA   94 (319)
T ss_dssp             ECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSEEEECCT
T ss_pred             eCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccccccccccc
Confidence            687  89999999999999999999998642           11000  0000    00001110000   124444442


Q ss_pred             ------------CC--------hhhHHHhhhcC-----CccEEEEcCCCCc----------------------ccHHHHH
Q 021331           59 ------------KD--------YDFVKSSLSAK-----GFDVVYDINGREA----------------------DEVEPIL   91 (314)
Q Consensus        59 ------------~d--------~~~l~~~~~~~-----~~d~vi~~a~~~~----------------------~~~~~~~   91 (314)
                                  +|        ++++.++++..     ++|++||+||...                      .++..+.
T Consensus        95 ~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  174 (319)
T 2ptg_A           95 VFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLL  174 (319)
T ss_dssp             TCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             cccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHH
Confidence                        22        33455554422     6999999987421                      1122333


Q ss_pred             HhCC----CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHH--------hcCCceEEEecCeeeCCCCCCchhHH
Q 021331           92 DALP----NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNYNPVEEW  159 (314)
Q Consensus        92 ~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~--------~~~~~~~ilR~~~v~g~~~~~~~~~~  159 (314)
                      +++.    ...++|++||...+......  ...|+.+|...+.+.+        .+++++..|+||.|..+.... ....
T Consensus       175 ~~~~~~m~~~g~Iv~isS~~~~~~~~~~--~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~-~~~~  251 (319)
T 2ptg_A          175 QHFLPLMKEGGSALALSYIASEKVIPGY--GGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASA-IGKA  251 (319)
T ss_dssp             HHHGGGEEEEEEEEEEEECC--------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC-----------
T ss_pred             HHHHHHHhcCceEEEEeccccccccCcc--chhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhh-cccc
Confidence            3332    23689999997654322111  0248888876665542        268999999999987763111 0000


Q ss_pred             HHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC--ccCCceEEecCCcc
Q 021331          160 FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY  213 (314)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~--~~~~~~~~i~~~~~  213 (314)
                      ....... ..............+...+|+|++++.++...  ...|.++.+.++..
T Consensus       252 ~~~~~~~-~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~  306 (319)
T 2ptg_A          252 GDKTFID-LAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLH  306 (319)
T ss_dssp             ----------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCT
T ss_pred             cchhhHH-HHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCce
Confidence            0000000 00000000011124668999999999999753  23688999998864

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.06  E-value=8.6e-10  Score=105.55  Aligned_cols=182  Identities=16%  Similarity=0.140  Sum_probs=120.2

Q ss_pred             CCcccccHHHHHHHHH-HCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC----Ccc
Q 021331            1 MGGTRFIGVFLSRLLV-KEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~-~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~----~~d   74 (314)
                      |||+|.||.++++.|. ++|. +|++++|+...... .. ....+++....++.++.+|++|++++.++++..    .+|
T Consensus       536 tGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~-~~-~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~~id  613 (795)
T 3slk_A          536 TGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASG-AA-ELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEHPLT  613 (795)
T ss_dssp             ETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTT-HH-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEE
T ss_pred             ccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHH-HH-HHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCE
Confidence            7999999999999999 7897 58888998433110 00 001233333567899999999999999988743    589


Q ss_pred             EEEEcCCC--------------------CcccHHHHHHhCC-CCCcEEEEeeceee-ccCCCCCccCccccchhhHHHHH
Q 021331           75 VVYDINGR--------------------EADEVEPILDALP-NLEQFIYCSSAGVY-LKSDLLPHCESRHKGKLNTESVL  132 (314)
Q Consensus        75 ~vi~~a~~--------------------~~~~~~~~~~~~~-~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~k~~~e~~~  132 (314)
                      +|||+||.                    |..++.++.+++. .. +||++||...+ |...    ...|..+|...+.+.
T Consensus       614 ~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-~iV~~SS~ag~~g~~g----~~~YaAaka~~~alA  688 (795)
T 3slk_A          614 AVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-ALVLFSSVSGVLGSGG----QGNYAAANSFLDALA  688 (795)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-EEEEEEETHHHHTCSS----CHHHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-EEEEEccHHhcCCCCC----CHHHHHHHHHHHHHH
Confidence            99999987                    2344667777766 44 89999996543 3222    226888887777665


Q ss_pred             ---HhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          133 ---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       133 ---~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                         +..|++++.|.||.+-.++............+....           ...+..++....+..++..+.
T Consensus       689 ~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~g-----------~~~l~~~e~~~~~~~~l~~~~  748 (795)
T 3slk_A          689 QQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLARSG-----------LLPISTEEGLSQFDAACGGAH  748 (795)
T ss_dssp             HHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHTT-----------BCCCCHHHHHHHHHHHHTSSC
T ss_pred             HHHHHcCCeEEEEECCeECcchhhccccHHHHHHHHhcC-----------CCCCCHHHHHHHHHHHHhCCC
Confidence               357899999999987655311100011111111111           234567888888888887654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.87  E-value=8.4e-09  Score=95.83  Aligned_cols=182  Identities=14%  Similarity=0.104  Sum_probs=112.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecC-CChhh-HHHhhhcC-CccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR-KDYDF-VKSSLSAK-GFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~d~~~-l~~~~~~~-~~d~vi   77 (314)
                      |||++.||.++++.|.++|++|++.+|.....       ...++......+..+.+|+ .+.+. ++++.+.+ ++|++|
T Consensus       328 TGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~-------~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLV  400 (604)
T 2et6_A          328 TGAGAGLGKEYAKWFAKYGAKVVVNDFKDATK-------TVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILV  400 (604)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEECSSCCHH-------HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             ECcchHHHHHHHHHHHHCCCEEEEEeCccHHH-------HHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEE
Confidence            89999999999999999999999988632210       0012222224566677788 55433 23333322 699999


Q ss_pred             EcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           78 DINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        78 ~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      |+||....                    +    ++.++..+.  +..++|++||....-.   .+....|+.+|.....+
T Consensus       401 nNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~---~~~~~~Y~asKaal~~l  477 (604)
T 2et6_A          401 NNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYG---NFGQANYSSSKAGILGL  477 (604)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC---CTTBHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccC---CCCChhHHHHHHHHHHH
Confidence            99996321                    1    334444443  4468999999654321   12222689999877665


Q ss_pred             HH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-cCC
Q 021331          132 LE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASR  203 (314)
Q Consensus       132 ~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-~~~  203 (314)
                      .+       .+|+++..|.|+. -.+     +.....    . ..         .......+|+|.+++.++.... ..|
T Consensus       478 t~~la~El~~~gIrVn~v~PG~-~T~-----m~~~~~----~-~~---------~~~~~~pe~vA~~v~~L~s~~~~itG  537 (604)
T 2et6_A          478 SKTMAIEGAKNNIKVNIVAPHA-ETA-----MTLSIM----R-EQ---------DKNLYHADQVAPLLVYLGTDDVPVTG  537 (604)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECC-CCC-----C-----------------------CCSSCGGGTHHHHHHTTSTTCCCCS
T ss_pred             HHHHHHHhCccCeEEEEEcCCC-CCc-----cccccC----c-hh---------hccCCCHHHHHHHHHHHhCCccCCCC
Confidence            43       4689999999983 222     111100    0 00         0123478999999998887533 467


Q ss_pred             ceEEecCCc
Q 021331          204 QVFNISGEK  212 (314)
Q Consensus       204 ~~~~i~~~~  212 (314)
                      +++.+.++.
T Consensus       538 ~~~~vdGG~  546 (604)
T 2et6_A          538 ETFEIGGGW  546 (604)
T ss_dssp             CEEEEETTE
T ss_pred             cEEEECCCe
Confidence            888888774

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.84  E-value=4.5e-09  Score=103.49  Aligned_cols=194  Identities=12%  Similarity=0.068  Sum_probs=115.7

Q ss_pred             CCcccc-cHHHHHHHHHHCCCeEEEEE-cCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc--------
Q 021331            1 MGGTRF-IGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------   70 (314)
Q Consensus         1 tGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~--------   70 (314)
                      |||+|. ||.++++.|+++|++|++++ |+......... .....+.....++.++.+|++|++++..+++.        
T Consensus       482 TGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~-eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~~~~~  560 (1688)
T 2pff_A          482 TGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQ-SIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNG  560 (1688)
T ss_dssp             CSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHH-HTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSCTTSS
T ss_pred             ECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHH-HHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhcccc
Confidence            799998 99999999999999999984 54433211000 00000111124688999999999988887752        


Q ss_pred             -C--CccEEEEcCCCCccc-----------------------HHHHHHhC------C--CCCcEEEEeeceeeccCCCCC
Q 021331           71 -K--GFDVVYDINGREADE-----------------------VEPILDAL------P--NLEQFIYCSSAGVYLKSDLLP  116 (314)
Q Consensus        71 -~--~~d~vi~~a~~~~~~-----------------------~~~~~~~~------~--~~~~~i~~Ss~~v~~~~~~~~  116 (314)
                       .  .+|++||+||.....                       +..+.+++      .  +..+||++||......     
T Consensus       561 GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G-----  635 (1688)
T 2pff_A          561 GLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG-----  635 (1688)
T ss_dssp             SCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS-----
T ss_pred             ccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC-----
Confidence             2  489999999863211                       11222222      2  2258999999544322     


Q ss_pred             ccCccccchhhHHHHH-H----hc--CCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHH
Q 021331          117 HCESRHKGKLNTESVL-E----SK--GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  189 (314)
Q Consensus       117 ~~e~~~~~k~~~e~~~-~----~~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  189 (314)
                      ....|+.+|...+.+. +    +.  .++++.+.||.+.+.......      ... ....    ... ...+...+|+|
T Consensus       636 g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~------e~~-~~~l----~~i-plR~~sPEEVA  703 (1688)
T 2pff_A          636 GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN------NII-AEGI----EKM-GVRTFSQKEMA  703 (1688)
T ss_dssp             CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTT------TTC-STTT----SSS-SCCCCCCCTTH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCc------hHH-HHHH----HhC-CCCCCCHHHHH
Confidence            1226999999988872 2    11  277788899988753211100      000 0000    000 01234789999


Q ss_pred             HHHHHHhcCCc---cCCceEEec--CCc
Q 021331          190 RAFVQVLGNEK---ASRQVFNIS--GEK  212 (314)
Q Consensus       190 ~~~~~~l~~~~---~~~~~~~i~--~~~  212 (314)
                      ++++.++....   ..|..+.+.  ++.
T Consensus       704 ~aIlFLaSd~sAs~ITGq~I~VDVDGG~  731 (1688)
T 2pff_A          704 FNLLGLLTPEVVELCQKSPVMADLNGGL  731 (1688)
T ss_dssp             HHHHHHTSTTHHHHHTTSCCCCCCSCSG
T ss_pred             HHHHHHhCCCccccccCcEEEEEcCCCe
Confidence            99999997651   146666653  553

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=98.81  E-value=4.2e-09  Score=106.66  Aligned_cols=201  Identities=12%  Similarity=0.039  Sum_probs=120.3

Q ss_pred             CCcccc-cHHHHHHHHHHCCCeEEEEE-cCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc--------
Q 021331            1 MGGTRF-IGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------   70 (314)
Q Consensus         1 tGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~--------   70 (314)
                      |||+|. ||.++++.|++.|++|++++ |+......... .....+.....++.++.+|++|.+++..+++.        
T Consensus       681 TGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~-eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~~~~~  759 (1887)
T 2uv8_A          681 TGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQ-SIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNG  759 (1887)
T ss_dssp             ESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSCTTTT
T ss_pred             ECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHH-HHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHhcccc
Confidence            799998 99999999999999999985 55433211000 00000111134688999999999988887752        


Q ss_pred             -C--CccEEEEcCCCCccc-----------------------HHHHHHhC---C-----CCCcEEEEeeceeeccCCCCC
Q 021331           71 -K--GFDVVYDINGREADE-----------------------VEPILDAL---P-----NLEQFIYCSSAGVYLKSDLLP  116 (314)
Q Consensus        71 -~--~~d~vi~~a~~~~~~-----------------------~~~~~~~~---~-----~~~~~i~~Ss~~v~~~~~~~~  116 (314)
                       .  .+|++||+||....+                       +..+..++   .     +..+||++||...+..     
T Consensus       760 G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g-----  834 (1887)
T 2uv8_A          760 GLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG-----  834 (1887)
T ss_dssp             SCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS-----
T ss_pred             ccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC-----
Confidence             2  489999999864211                       11222322   1     1258999999654322     


Q ss_pred             ccCccccchhhHHHH-H----HhcC--CceEEEecCeeeCCCC-C-CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHH
Q 021331          117 HCESRHKGKLNTESV-L----ESKG--VNWTSLRPVYIYGPLN-Y-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  187 (314)
Q Consensus       117 ~~e~~~~~k~~~e~~-~----~~~~--~~~~ilR~~~v~g~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  187 (314)
                      ....|+.+|...+.+ .    .+.+  +.++.++||++.+... . ......    .....+          ..+...+|
T Consensus       835 g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~----~~~~~p----------lr~~sPEE  900 (1887)
T 2uv8_A          835 GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAE----GIEKMG----------VRTFSQKE  900 (1887)
T ss_dssp             CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHH----HHHTTS----------CCCEEHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHHH----HHHhcC----------CCCCCHHH
Confidence            112699999888776 2    2222  8899999999985221 1 011111    111111          02447899


Q ss_pred             HHHHHHHHhcCC-c--cCCceEEec--CCcc--ccHHHHHH
Q 021331          188 LARAFVQVLGNE-K--ASRQVFNIS--GEKY--VTFDGLAR  221 (314)
Q Consensus       188 ~a~~~~~~l~~~-~--~~~~~~~i~--~~~~--~s~~el~~  221 (314)
                      +|++++.++... .  ..|..+.+.  ||..  ..+.++..
T Consensus       901 VA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~~l~el~~  941 (1887)
T 2uv8_A          901 MAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTA  941 (1887)
T ss_dssp             HHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSSSHHHHHH
T ss_pred             HHHHHHHHhCCCccccccCcEEEEECCCCeeccccHHHHHH
Confidence            999999988754 1  145666663  5532  23444443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.80  E-value=1.6e-08  Score=94.00  Aligned_cols=203  Identities=13%  Similarity=0.100  Sum_probs=119.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCccccc----CCCCCCchhhhhccCceEEEEecCCChhhHHHhhh----cC-
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ----QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----AK-   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~----~~-   71 (314)
                      |||++.||.++++.|+++|++|++.+|+......    ...+....++.....  . ..+|+.|.++++.+++    .+ 
T Consensus        14 TGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~--~-~~~d~~d~~~~~~~v~~~~~~~G   90 (604)
T 2et6_A           14 TGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGG--V-AVADYNNVLDGDKIVETAVKNFG   90 (604)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTC--E-EEEECCCTTCHHHHHHHHHHHHS
T ss_pred             eCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCC--e-EEEEcCCHHHHHHHHHHHHHHcC
Confidence            8999999999999999999999998876411000    000000011111111  2 2357776644443332    22 


Q ss_pred             CccEEEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           72 GFDVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        72 ~~d~vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      ++|++||+||....                    +    ++.++..+.  +..++|++||....-..   |....|..+|
T Consensus        91 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~---~~~~~Y~asK  167 (604)
T 2et6_A           91 TVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGN---FGQANYASAK  167 (604)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---TTBHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC---CCchHHHHHH
Confidence            69999999996321                    1    334444443  45699999996543221   2222689999


Q ss_pred             hhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          126 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       126 ~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      .....+.+       .+|+++..|.|+ +.     .++.    ...   .+       .........+|+|.+++.++..
T Consensus       168 aal~~lt~~la~El~~~gIrVn~v~Pg-~~-----T~m~----~~~---~~-------~~~~~~~~pe~vA~~v~~L~s~  227 (604)
T 2et6_A          168 SALLGFAETLAKEGAKYNIKANAIAPL-AR-----SRMT----ESI---MP-------PPMLEKLGPEKVAPLVLYLSSA  227 (604)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEEC-CC-----CHHH----HTT---SC-------HHHHTTCSHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEccC-Cc-----Cccc----ccc---CC-------hhhhccCCHHHHHHHHHHHhCC
Confidence            87766653       468999999996 21     1111    100   00       0001234789999999999876


Q ss_pred             Cc-cCCceEEecCC------------------ccccHHHHHHHHHHHhCC
Q 021331          199 EK-ASRQVFNISGE------------------KYVTFDGLARACAKAAGF  229 (314)
Q Consensus       199 ~~-~~~~~~~i~~~------------------~~~s~~el~~~i~~~~g~  229 (314)
                      .. ..|+++.+.++                  ...+..++.+.+.++...
T Consensus       228 ~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  277 (604)
T 2et6_A          228 ENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDY  277 (604)
T ss_dssp             SCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCC
T ss_pred             cccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhch
Confidence            42 25778887765                  235668888888776543

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.78  E-value=1.8e-08  Score=102.03  Aligned_cols=204  Identities=10%  Similarity=0.027  Sum_probs=122.0

Q ss_pred             CCcccc-cHHHHHHHHHHCCCeEEEEEcC-CcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-------C
Q 021331            1 MGGTRF-IGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K   71 (314)
Q Consensus         1 tGatG~-iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-------~   71 (314)
                      |||+|. ||.++++.|++.|++|++++++ ......... .....+.....++.++.+|++|++++..+++.       .
T Consensus       658 TGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~-eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~~~~~  736 (1878)
T 2uv9_A          658 TGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQ-GIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDTKNGL  736 (1878)
T ss_dssp             ESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCSSSSC
T ss_pred             ECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHH-HHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHhhccc
Confidence            799998 9999999999999999998644 332110000 00001111134688999999999988887753       3


Q ss_pred             --CccEEEEcCCCCccc-----------------------HHHHHHh------CC--CCCcEEEEeeceeeccCCCCCcc
Q 021331           72 --GFDVVYDINGREADE-----------------------VEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHC  118 (314)
Q Consensus        72 --~~d~vi~~a~~~~~~-----------------------~~~~~~~------~~--~~~~~i~~Ss~~v~~~~~~~~~~  118 (314)
                        .+|+|||+||....+                       +..+...      +.  +..+||++||...+...     .
T Consensus       737 G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~gg-----~  811 (1878)
T 2uv9_A          737 GWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFGN-----D  811 (1878)
T ss_dssp             CCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSSC-----C
T ss_pred             CCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccCC-----c
Confidence              489999999863211                       1112222      22  23589999996543221     2


Q ss_pred             CccccchhhHHHHHH----h---cCCceEEEecCeee-CCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHH
Q 021331          119 ESRHKGKLNTESVLE----S---KGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  190 (314)
Q Consensus       119 e~~~~~k~~~e~~~~----~---~~~~~~ilR~~~v~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  190 (314)
                      ..|+.+|...+.+.+    +   ..++++.|.||++- .+....   ...........++          .+.+.+|+|+
T Consensus       812 ~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~---~~~~~~~~~~~pl----------r~~sPeEVA~  878 (1878)
T 2uv9_A          812 GLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSA---NNLVAEGVEKLGV----------RTFSQQEMAF  878 (1878)
T ss_dssp             SSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSH---HHHTHHHHHTTTC----------CCBCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccccc---chhhHHHHHhcCC----------CCCCHHHHHH
Confidence            269999988777642    1   12889999999887 432111   0111111111111          2347899999


Q ss_pred             HHHHHhcCCc---cCCceEEec--CCcc--ccHHHHHHHH
Q 021331          191 AFVQVLGNEK---ASRQVFNIS--GEKY--VTFDGLARAC  223 (314)
Q Consensus       191 ~~~~~l~~~~---~~~~~~~i~--~~~~--~s~~el~~~i  223 (314)
                      +++.++....   ..|..+.+.  +|..  ..+.++...+
T Consensus       879 avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~l  918 (1878)
T 2uv9_A          879 NLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKL  918 (1878)
T ss_dssp             HHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHH
T ss_pred             HHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHH
Confidence            9999887532   246777663  5532  3445554433

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.74  E-value=9.5e-09  Score=74.39  Aligned_cols=84  Identities=24%  Similarity=0.197  Sum_probs=66.6

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      +|+ |++|..+++.|.+.| ++|++++|+++......           ..++.++.+|+.+.+.+.+++.  ++|+|||+
T Consensus        11 ~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-----------~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~   76 (118)
T 3ic5_A           11 VGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-----------RMGVATKQVDAKDEAGLAKALG--GFDAVISA   76 (118)
T ss_dssp             ECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-----------TTTCEEEECCTTCHHHHHHHTT--TCSEEEEC
T ss_pred             ECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-----------hCCCcEEEecCCCHHHHHHHHc--CCCEEEEC
Confidence            588 999999999999999 99999999876532111           1467889999999999999998  99999999


Q ss_pred             CCCCcccHHHHHHhCC--CCCcE
Q 021331           80 NGREADEVEPILDALP--NLEQF  100 (314)
Q Consensus        80 a~~~~~~~~~~~~~~~--~~~~~  100 (314)
                      ++.  ....++++.+.  ++.+|
T Consensus        77 ~~~--~~~~~~~~~~~~~g~~~~   97 (118)
T 3ic5_A           77 APF--FLTPIIAKAAKAAGAHYF   97 (118)
T ss_dssp             SCG--GGHHHHHHHHHHTTCEEE
T ss_pred             CCc--hhhHHHHHHHHHhCCCEE
Confidence            964  34567777766  54443

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=98.68  E-value=4.8e-08  Score=84.83  Aligned_cols=184  Identities=10%  Similarity=-0.026  Sum_probs=112.8

Q ss_pred             CCcccccHHHHHHHHHH-CCCeEEEEEcCCcccccCCC-------CCCchhhhhccCceEEEEecCCChhhHHHhhhcC-
Q 021331            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLP-------GESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-   71 (314)
                      |||++.||.++++.|++ .|++|++++|+.+.......       ......+......+..+.+|++|++++.++++.. 
T Consensus        53 TGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~  132 (405)
T 3zu3_A           53 IGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIK  132 (405)
T ss_dssp             ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             eCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            79999999999999999 99999999987654221100       0001122223456888999999998888777532 


Q ss_pred             ----CccEEEEcCCCC----------------c----------------------cc----------------HH-HHHH
Q 021331           72 ----GFDVVYDINGRE----------------A----------------------DE----------------VE-PILD   92 (314)
Q Consensus        72 ----~~d~vi~~a~~~----------------~----------------------~~----------------~~-~~~~   92 (314)
                          ++|++||+||..                .                      ..                .- .+.+
T Consensus       133 ~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~~~~~~~  212 (405)
T 3zu3_A          133 QDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGEDWQMWID  212 (405)
T ss_dssp             HHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHHH
T ss_pred             HHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchhHHHHHHH
Confidence                689999998753                0                      00                00 1122


Q ss_pred             h-----CC-CCCcEEEEeeceeeccCCCCCcc--CccccchhhHHHHHH-------hc-CCceEEEecCeeeCCCC-CCc
Q 021331           93 A-----LP-NLEQFIYCSSAGVYLKSDLLPHC--ESRHKGKLNTESVLE-------SK-GVNWTSLRPVYIYGPLN-YNP  155 (314)
Q Consensus        93 ~-----~~-~~~~~i~~Ss~~v~~~~~~~~~~--e~~~~~k~~~e~~~~-------~~-~~~~~ilR~~~v~g~~~-~~~  155 (314)
                      +     +. +..++|.+||.+..-.   .|..  ..|+.+|...+.+.+       .+ |+++..+.|+.|-.+.. .-+
T Consensus       213 ~~~~~~m~~~gG~IVniSSi~~~~~---~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~s~~ip  289 (405)
T 3zu3_A          213 ALLDAGVLAEGAQTTAFTYLGEKIT---HDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQASSAIP  289 (405)
T ss_dssp             HHHHHTCEEEEEEEEEEECCCCGGG---TTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHHHHTST
T ss_pred             HHHHHhhhhCCcEEEEEeCchhhCc---CCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCchhhcCC
Confidence            2     11 2357999999665322   2222  368899988777653       36 89999999998876521 011


Q ss_pred             hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          156 VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      ..+.....+..  ++.         .+-..+|++++++.+++.
T Consensus       290 ~~p~y~~~l~~--~mk---------r~G~~Ed~a~~i~~L~sd  321 (405)
T 3zu3_A          290 MMPLYLSLLFK--VMK---------EKGTHEGCIEQVYSLYKD  321 (405)
T ss_dssp             THHHHHHHHHH--HHH---------HHTCCCCHHHHHHHHHHH
T ss_pred             CCcHHHHHHHH--HHh---------cCCCcHHHHHHHHHHHhc
Confidence            11111111111  111         122247888998888864

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=98.66  E-value=3.6e-08  Score=86.90  Aligned_cols=147  Identities=9%  Similarity=-0.085  Sum_probs=96.7

Q ss_pred             CCcccccHHH--HHHHHHHCCCeEEEEEcCCcccccCCC-------CCCchhhhhccCceEEEEecCCChhhHHHhhhcC
Q 021331            1 MGGTRFIGVF--LSRLLVKEGHQVTLFTRGKAPIAQQLP-------GESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK   71 (314)
Q Consensus         1 tGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~   71 (314)
                      |||++.||.+  +++.|.++|++|++++|+.........       .............+.++.+|++|+++++++++..
T Consensus        66 TGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~v~~i  145 (418)
T 4eue_A           66 VGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKDKVIKYI  145 (418)
T ss_dssp             ESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence            7999999999  999999999999999997654221110       0001112223456889999999998888776532


Q ss_pred             -----CccEEEEcCCCC----------------cc---------------------------c---HH---------HHH
Q 021331           72 -----GFDVVYDINGRE----------------AD---------------------------E---VE---------PIL   91 (314)
Q Consensus        72 -----~~d~vi~~a~~~----------------~~---------------------------~---~~---------~~~   91 (314)
                           ++|++||+||..                ..                           .   +.         .++
T Consensus       146 ~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~~~~~~~  225 (418)
T 4eue_A          146 KDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGEDWQEWC  225 (418)
T ss_dssp             HHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSSHHHHHHH
T ss_pred             HHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhHHHHHHHH
Confidence                 589999998863                00                           0   00         112


Q ss_pred             HhCC------CCCcEEEEeeceeeccCCCCCcc--CccccchhhHHHHH-------Hh-cCCceEEEecCeeeCC
Q 021331           92 DALP------NLEQFIYCSSAGVYLKSDLLPHC--ESRHKGKLNTESVL-------ES-KGVNWTSLRPVYIYGP  150 (314)
Q Consensus        92 ~~~~------~~~~~i~~Ss~~v~~~~~~~~~~--e~~~~~k~~~e~~~-------~~-~~~~~~ilR~~~v~g~  150 (314)
                      .++.      +..++|.+||.+..-.   .|..  ..|+.+|...+.+.       .. +|+++..+.||.|-.+
T Consensus       226 ~~l~~~~~~~~gg~IV~iSSi~~~~~---~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~  297 (418)
T 4eue_A          226 EELLYEDCFSDKATTIAYSYIGSPRT---YKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTK  297 (418)
T ss_dssp             HHHHHTTCEEEEEEEEEEECCCCGGG---TTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred             HHHHHHhhhcCCcEEEEEeCchhcCC---CCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence            2211      2357899998654321   2222  36888888776664       34 6899999999988765

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=98.61  E-value=6.1e-08  Score=84.95  Aligned_cols=184  Identities=13%  Similarity=0.033  Sum_probs=113.2

Q ss_pred             CCcccccHHHHHHHHHH-CCCeEEEEEcCCcccccCCC-------CCCchhhhhccCceEEEEecCCChhhHHHhhh---
Q 021331            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLP-------GESDQEFAEFSSKILHLKGDRKDYDFVKSSLS---   69 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~---   69 (314)
                      |||++.||.++++.|.+ .|++|++++|+.+.......       ......+......+..+.+|++|+++++++++   
T Consensus        67 TGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~  146 (422)
T 3s8m_A           67 IGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQVIELIK  146 (422)
T ss_dssp             ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             ECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            79999999999999999 99999999988765321110       00001223334568889999999988776664   


Q ss_pred             -cC--CccEEEEcCCCC----------------cc-----------------------c-------------H---HHHH
Q 021331           70 -AK--GFDVVYDINGRE----------------AD-----------------------E-------------V---EPIL   91 (314)
Q Consensus        70 -~~--~~d~vi~~a~~~----------------~~-----------------------~-------------~---~~~~   91 (314)
                       ..  ++|++||+||..                ..                       .             .   ..++
T Consensus       147 ~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~~~~~~  226 (422)
T 3s8m_A          147 TEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWI  226 (422)
T ss_dssp             HHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHH
T ss_pred             HHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchhHHHHHH
Confidence             23  589999998751                00                       0             0   0122


Q ss_pred             HhC-----C-CCCcEEEEeeceeeccCCCCCcc--CccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCC-c
Q 021331           92 DAL-----P-NLEQFIYCSSAGVYLKSDLLPHC--ESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-P  155 (314)
Q Consensus        92 ~~~-----~-~~~~~i~~Ss~~v~~~~~~~~~~--e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~-~  155 (314)
                      .++     . +..++|.+||....-.   .|..  ..|+.+|...+.+.+       .+|+++..+.||.|-.+.... +
T Consensus       227 ~a~~~~~m~~~gG~IVniSSi~g~~~---~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~~~ip  303 (422)
T 3s8m_A          227 DALEGAGVLADGARSVAFSYIGTEIT---WPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASAAIP  303 (422)
T ss_dssp             HHHHHTTCEEEEEEEEEEEECCCGGG---HHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST
T ss_pred             HHHHHHHHhhCCCEEEEEeCchhhcc---CCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhhhcCC
Confidence            221     1 2357999999654321   1211  258889988777653       468999999999988764211 1


Q ss_pred             hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          156 VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      ..+.....+.  .++.-.|         ..+|++++++.++..
T Consensus       304 ~~~~~~~~~~--~~m~r~G---------~pEdva~~v~~L~sd  335 (422)
T 3s8m_A          304 VMPLYISMVY--KIMKEKG---------LHEGTIEQLDRLFRE  335 (422)
T ss_dssp             HHHHHHHHHH--HHHHHTT---------CCCCHHHHHHHHHHH
T ss_pred             CChHHHHHHH--hhhcCCc---------ChHHHHHHHHHHhcc
Confidence            2222111111  1111112         247888998888864

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.39  E-value=6.2e-07  Score=67.04  Aligned_cols=91  Identities=13%  Similarity=0.109  Sum_probs=64.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHh-hhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~-~~~~~~d~vi~~   79 (314)
                      +|+ |.+|..+++.|.+.|++|++++++++.... +.          ..+..++.+|..+++.+.++ +.  ++|+||++
T Consensus        12 ~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~-~~----------~~~~~~~~~d~~~~~~l~~~~~~--~~d~vi~~   77 (144)
T 2hmt_A           12 IGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA-YA----------SYATHAVIANATEENELLSLGIR--NFEYVIVA   77 (144)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHT-TT----------TTCSEEEECCTTCHHHHHTTTGG--GCSEEEEC
T ss_pred             ECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----------HhCCEEEEeCCCCHHHHHhcCCC--CCCEEEEC
Confidence            476 999999999999999999999998655332 21          13456788999998888775 55  89999999


Q ss_pred             CCCCcccHHHHHHhCC--CCCcEEEEee
Q 021331           80 NGREADEVEPILDALP--NLEQFIYCSS  105 (314)
Q Consensus        80 a~~~~~~~~~~~~~~~--~~~~~i~~Ss  105 (314)
                      ++........+...++  +..++|..++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~ii~~~~  105 (144)
T 2hmt_A           78 IGANIQASTLTTLLLKELDIPNIWVKAQ  105 (144)
T ss_dssp             CCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred             CCCchHHHHHHHHHHHHcCCCeEEEEeC
Confidence            8865332333444444  4556665444

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.30  E-value=5.5e-07  Score=95.66  Aligned_cols=144  Identities=17%  Similarity=0.151  Sum_probs=96.4

Q ss_pred             CCcccccHHHHHHHHHHCCCe-EEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~----~~d~   75 (314)
                      |||+|.||.++++.|.++|++ |++++|+........  .....+.....++.++.+|++|+++++++++..    .+|+
T Consensus      1890 TGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~--~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g~id~ 1967 (2512)
T 2vz8_A         1890 TGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQA--RQVREWRRQGVQVLVSTSNASSLDGARSLITEATQLGPVGG 1967 (2512)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHH--HHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHSCEEE
T ss_pred             ECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHH--HHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcCCCcE
Confidence            799999999999999999986 777788764321000  000112222356888899999999888877532    6899


Q ss_pred             EEEcCCCC--------------------cccHHHHH----HhCCCCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           76 VYDINGRE--------------------ADEVEPIL----DALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        76 vi~~a~~~--------------------~~~~~~~~----~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      |||+||..                    ..++.++.    ..+....+||++||....-..   +-...|+.+|...+.+
T Consensus      1968 lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~---~g~~~Y~aaKaal~~l 2044 (2512)
T 2vz8_A         1968 VFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGN---AGQANYGFANSAMERI 2044 (2512)
T ss_dssp             EEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTC---TTCHHHHHHHHHHHHH
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCC---CCcHHHHHHHHHHHHH
Confidence            99999862                    22233333    334445799999996543221   1122699999998888


Q ss_pred             HH---hcCCceEEEecCeeeC
Q 021331          132 LE---SKGVNWTSLRPVYIYG  149 (314)
Q Consensus       132 ~~---~~~~~~~ilR~~~v~g  149 (314)
                      .+   ..|++...+..+.+-+
T Consensus      2045 ~~~rr~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A         2045 CEKRRHDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp             HHHHHHTTSCCCEEEECCBCT
T ss_pred             HHHHHHCCCcEEEEEccCcCC
Confidence            75   5688877777765533

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.13  E-value=9.5e-07  Score=74.45  Aligned_cols=75  Identities=19%  Similarity=0.210  Sum_probs=57.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||+|++|+++++.|++.|++|++++|+.++.....     ..+.. ..++.++.+|+++++++.++++  ++|+|||++
T Consensus       125 tGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~-----~~~~~-~~~~~~~~~D~~~~~~~~~~~~--~~DvlVn~a  196 (287)
T 1lu9_A          125 LAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAA-----DSVNK-RFKVNVTAAETADDASRAEAVK--GAHFVFTAG  196 (287)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHH-HHTCCCEEEECCSHHHHHHHTT--TCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHH-----HHHHh-cCCcEEEEecCCCHHHHHHHHH--hCCEEEECC
Confidence            699999999999999999999999999865422111     01111 0246778899999999999998  799999999


Q ss_pred             CCC
Q 021331           81 GRE   83 (314)
Q Consensus        81 ~~~   83 (314)
                      +..
T Consensus       197 g~g  199 (287)
T 1lu9_A          197 AIG  199 (287)
T ss_dssp             CTT
T ss_pred             Ccc
Confidence            753

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.12  E-value=2.7e-06  Score=63.48  Aligned_cols=67  Identities=24%  Similarity=0.227  Sum_probs=53.3

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |+ |.+|..+++.|.+.|++|++++++++......           ..++.++.+|.++++.+.++- ..++|+||.+.+
T Consensus        13 G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~-----------~~~~~~~~gd~~~~~~l~~~~-~~~~d~vi~~~~   79 (141)
T 3llv_A           13 GS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE-----------DEGFDAVIADPTDESFYRSLD-LEGVSAVLITGS   79 (141)
T ss_dssp             CC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-----------HTTCEEEECCTTCHHHHHHSC-CTTCSEEEECCS
T ss_pred             CC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH-----------HCCCcEEECCCCCHHHHHhCC-cccCCEEEEecC
Confidence            54 99999999999999999999999876532111           146788999999999888762 227999998887

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=97.95  E-value=1.1e-05  Score=72.14  Aligned_cols=71  Identities=17%  Similarity=0.192  Sum_probs=56.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      +| +|++|+++++.|.+.|++|++++|+.++.......         ..++..+.+|+.|.+++.++++  ++|+|||++
T Consensus         9 iG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~---------~~~~~~~~~Dv~d~~~l~~~l~--~~DvVIn~a   76 (450)
T 1ff9_A            9 LG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG---------VQHSTPISLDVNDDAALDAEVA--KHDLVISLI   76 (450)
T ss_dssp             EC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTT---------CTTEEEEECCTTCHHHHHHHHT--TSSEEEECC
T ss_pred             EC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHh---------cCCceEEEeecCCHHHHHHHHc--CCcEEEECC
Confidence            46 79999999999999999999999987653322211         1347788899999999999998  899999999


Q ss_pred             CCC
Q 021331           81 GRE   83 (314)
Q Consensus        81 ~~~   83 (314)
                      +..
T Consensus        77 ~~~   79 (450)
T 1ff9_A           77 PYT   79 (450)
T ss_dssp             C--
T ss_pred             ccc
Confidence            864

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.85  E-value=1.2e-05  Score=59.60  Aligned_cols=88  Identities=17%  Similarity=0.215  Sum_probs=59.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHh-hhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~-~~~~~~d~vi~~   79 (314)
                      +|+ |++|..+++.|.+.|++|++++|+++.... +        .+ ..++.++.+|..+++.+.+. +.  ++|+||++
T Consensus        10 iG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~-~--------~~-~~~~~~~~~d~~~~~~l~~~~~~--~~d~vi~~   76 (140)
T 1lss_A           10 AGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKK-A--------SA-EIDALVINGDCTKIKTLEDAGIE--DADMYIAV   76 (140)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-H--------HH-HCSSEEEESCTTSHHHHHHTTTT--TCSEEEEC
T ss_pred             ECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH-H--------HH-hcCcEEEEcCCCCHHHHHHcCcc--cCCEEEEe
Confidence            355 999999999999999999999997654221 1        00 12566788999888877654 55  89999999


Q ss_pred             CCCCcccHHHHHHhCC--CCCcEEE
Q 021331           80 NGREADEVEPILDALP--NLEQFIY  102 (314)
Q Consensus        80 a~~~~~~~~~~~~~~~--~~~~~i~  102 (314)
                      .+... ....+...++  +..++|.
T Consensus        77 ~~~~~-~~~~~~~~~~~~~~~~ii~  100 (140)
T 1lss_A           77 TGKEE-VNLMSSLLAKSYGINKTIA  100 (140)
T ss_dssp             CSCHH-HHHHHHHHHHHTTCCCEEE
T ss_pred             eCCch-HHHHHHHHHHHcCCCEEEE
Confidence            76432 1122333333  4456664

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.83  E-value=1.9e-05  Score=67.58  Aligned_cols=95  Identities=16%  Similarity=0.233  Sum_probs=61.9

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      +||+|++|..++..|+.+|  ++|+++++++.... .      ..+.+......+ .+ +.+..++.++++  ++|+|||
T Consensus        14 iGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~-~------~dL~~~~~~~~v-~~-~~~t~d~~~al~--gaDvVi~   82 (326)
T 1smk_A           14 LGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGV-T------ADISHMDTGAVV-RG-FLGQQQLEAALT--GMDLIIV   82 (326)
T ss_dssp             ETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHH-H------HHHHTSCSSCEE-EE-EESHHHHHHHHT--TCSEEEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhH-H------HHhhcccccceE-EE-EeCCCCHHHHcC--CCCEEEE
Confidence            5899999999999999998  89999997764110 0      001110011111 12 233456778888  9999999


Q ss_pred             cCCCCc--------------ccHHHHHHhCC--CCCcEEEEeec
Q 021331           79 INGREA--------------DEVEPILDALP--NLEQFIYCSSA  106 (314)
Q Consensus        79 ~a~~~~--------------~~~~~~~~~~~--~~~~~i~~Ss~  106 (314)
                      +++...              ..++++++.+.  ..+.+|+++|.
T Consensus        83 ~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN  126 (326)
T 1smk_A           83 PAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN  126 (326)
T ss_dssp             CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             cCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            998632              34566777766  55677777774

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=97.81  E-value=4.2e-05  Score=81.95  Aligned_cols=207  Identities=10%  Similarity=0.046  Sum_probs=116.2

Q ss_pred             CCcccc-cHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc--------C
Q 021331            1 MGGTRF-IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------K   71 (314)
Q Consensus         1 tGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~--------~   71 (314)
                      |||++. ||.++++.|++.|++|++++|+.+.............+......+..+.+|++|+++++.+++.        +
T Consensus      2142 TGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~~~~~~f 2221 (3089)
T 3zen_D         2142 TGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVGTEQTESL 2221 (3089)
T ss_dssp             ESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTSCCEEEE
T ss_pred             eCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHhhhhhhc
Confidence            799988 9999999999999999999998655100000000011111134678899999999988877542        1


Q ss_pred             -CccEEEEcCCC-C---c----------cc---------------H----HHHHHhCC--CC-C--cEEEEeeceeeccC
Q 021331           72 -GFDVVYDINGR-E---A----------DE---------------V----EPILDALP--NL-E--QFIYCSSAGVYLKS  112 (314)
Q Consensus        72 -~~d~vi~~a~~-~---~----------~~---------------~----~~~~~~~~--~~-~--~~i~~Ss~~v~~~~  112 (314)
                       ++|++||+||. .   .          ..               +    +.++..+.  +. .  .+|..+| ...+. 
T Consensus      2222 G~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~s-s~~g~- 2299 (3089)
T 3zen_D         2222 GPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGS-PNRGM- 2299 (3089)
T ss_dssp             SSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEEC-SSTTS-
T ss_pred             CCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECC-ccccc-
Confidence             48999999996 0   0          00               1    11222222  11 1  1222111 11111 


Q ss_pred             CCCCccCccccchhhHHHHHH----h----cCCceEEEecCeeeCCCCCC--chhHHHHHHHHcCCCeecCCCCCceeee
Q 021331          113 DLLPHCESRHKGKLNTESVLE----S----KGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQL  182 (314)
Q Consensus       113 ~~~~~~e~~~~~k~~~e~~~~----~----~~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (314)
                        .+....|+.+|...+.+.+    +    .++.++.+.||++-+.....  ....    ......     +     ...
T Consensus      2300 --~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~~~~----~~~~~~-----~-----~r~ 2363 (3089)
T 3zen_D         2300 --FGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQNDAIV----SAVEEA-----G-----VTT 2363 (3089)
T ss_dssp             --CSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTTTTH----HHHGGG-----S-----CBC
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccchhHH----HHHHhc-----C-----CCC
Confidence              1111258999988776653    3    23678888999887543211  1111    111111     0     112


Q ss_pred             eeHHHHHHHHHHHhcCCcc---CCc--eEEecCCcc---ccHHHHHHHHHH
Q 021331          183 GHVKDLARAFVQVLGNEKA---SRQ--VFNISGEKY---VTFDGLARACAK  225 (314)
Q Consensus       183 i~~~D~a~~~~~~l~~~~~---~~~--~~~i~~~~~---~s~~el~~~i~~  225 (314)
                      ...+|+|.+++.++.....   .+.  ...++|+-.   .++.++...+++
T Consensus      2364 ~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~~ 2414 (3089)
T 3zen_D         2364 YTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKARE 2414 (3089)
T ss_dssp             EEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHHH
T ss_pred             CCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHHH
Confidence            2789999999998874311   122  345556642   578888876644

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=97.75  E-value=1.8e-05  Score=69.88  Aligned_cols=93  Identities=12%  Similarity=0.078  Sum_probs=66.1

Q ss_pred             CCcccccHHHHHHHHHHCC---CeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecCCChhhHHHhhhcCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~~~~d~v   76 (314)
                      +|| |++|+.+++.|.+.|   .+|++.+|+.++......     .+... ..++..+.+|++|.+++.++++..++|+|
T Consensus         7 iGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~-----~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV   80 (405)
T 4ina_A            7 IGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQ-----SIKAKGYGEIDITTVDADSIEELVALINEVKPQIV   80 (405)
T ss_dssp             ECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHH-----HHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             ECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHH-----HhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence            477 999999999999998   389999998765321110     01000 12588899999999999999984459999


Q ss_pred             EEcCCCCcccHHHHHHhCC-CCCcEE
Q 021331           77 YDINGREADEVEPILDALP-NLEQFI  101 (314)
Q Consensus        77 i~~a~~~~~~~~~~~~~~~-~~~~~i  101 (314)
                      ||+++...  ...++++|. ...+++
T Consensus        81 in~ag~~~--~~~v~~a~l~~g~~vv  104 (405)
T 4ina_A           81 LNIALPYQ--DLTIMEACLRTGVPYL  104 (405)
T ss_dssp             EECSCGGG--HHHHHHHHHHHTCCEE
T ss_pred             EECCCccc--ChHHHHHHHHhCCCEE
Confidence            99998643  356666665 333444

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.72  E-value=2.4e-05  Score=68.23  Aligned_cols=86  Identities=15%  Similarity=0.089  Sum_probs=65.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      .|| |++|+.+++.|.+ .++|++.+++.+.....            ...+..+.+|+.|.+++.++++  ++|+||+++
T Consensus        22 lGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~------------~~~~~~~~~d~~d~~~l~~~~~--~~DvVi~~~   85 (365)
T 3abi_A           22 LGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKV------------KEFATPLKVDASNFDKLVEVMK--EFELVIGAL   85 (365)
T ss_dssp             ECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHH------------TTTSEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH------------hccCCcEEEecCCHHHHHHHHh--CCCEEEEec
Confidence            376 9999999999865 58999999887653321            2456778899999999999999  999999999


Q ss_pred             CCCcccHHHHHHhCC-CCCcEEEEe
Q 021331           81 GREADEVEPILDALP-NLEQFIYCS  104 (314)
Q Consensus        81 ~~~~~~~~~~~~~~~-~~~~~i~~S  104 (314)
                      +...  ...++++|. ..++++=+|
T Consensus        86 p~~~--~~~v~~~~~~~g~~yvD~s  108 (365)
T 3abi_A           86 PGFL--GFKSIKAAIKSKVDMVDVS  108 (365)
T ss_dssp             CGGG--HHHHHHHHHHHTCEEEECC
T ss_pred             CCcc--cchHHHHHHhcCcceEeee
Confidence            8652  346777776 444666443

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.71  E-value=0.00011  Score=55.66  Aligned_cols=67  Identities=15%  Similarity=0.317  Sum_probs=52.4

Q ss_pred             ccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHh-hhcCCccEEEEcCCC
Q 021331            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDINGR   82 (314)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~-~~~~~~d~vi~~a~~   82 (314)
                      .|.+|..+++.|.+.|++|++++|+++........          .+..++.+|..+++.+.++ +.  ++|+||.+.+.
T Consensus        27 ~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~----------~g~~~~~~d~~~~~~l~~~~~~--~ad~Vi~~~~~   94 (155)
T 2g1u_A           27 CGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSE----------FSGFTVVGDAAEFETLKECGME--KADMVFAFTND   94 (155)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTT----------CCSEEEESCTTSHHHHHTTTGG--GCSEEEECSSC
T ss_pred             CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhc----------CCCcEEEecCCCHHHHHHcCcc--cCCEEEEEeCC
Confidence            59999999999999999999999987664322201          3566778898888777765 55  79999998875

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.68  E-value=5.9e-05  Score=56.96  Aligned_cols=71  Identities=15%  Similarity=0.249  Sum_probs=53.6

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHh-hhcCCccEEEEcC
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDIN   80 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~-~~~~~~d~vi~~a   80 (314)
                      | .|.+|+.+++.|.+.|++|++++++++.....+.       .....++.++.+|.++++.+.++ +.  ++|.||-+.
T Consensus        10 G-~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~-------~~~~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~   79 (153)
T 1id1_A           10 G-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLE-------QRLGDNADVIPGDSNDSSVLKKAGID--RCRAILALS   79 (153)
T ss_dssp             C-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHH-------HHHCTTCEEEESCTTSHHHHHHHTTT--TCSEEEECS
T ss_pred             C-CCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHH-------HhhcCCCeEEEcCCCCHHHHHHcChh--hCCEEEEec
Confidence            5 4999999999999999999999997531100000       00014688999999999998886 66  899999887


Q ss_pred             CC
Q 021331           81 GR   82 (314)
Q Consensus        81 ~~   82 (314)
                      +.
T Consensus        80 ~~   81 (153)
T 1id1_A           80 DN   81 (153)
T ss_dssp             SC
T ss_pred             CC
Confidence            64

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.62  E-value=3.4e-05  Score=60.95  Aligned_cols=93  Identities=18%  Similarity=0.191  Sum_probs=61.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhh---hcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL---SAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~---~~~~~d~vi   77 (314)
                      +||+|.+|..+++.+...|++|++++|+.+.... ..        +  .+... ..|..+.+..+.+.   ...++|++|
T Consensus        45 ~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~-~~--------~--~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi  112 (198)
T 1pqw_A           45 HSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM-LS--------R--LGVEY-VGDSRSVDFADEILELTDGYGVDVVL  112 (198)
T ss_dssp             TTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH-HH--------T--TCCSE-EEETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred             eeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH--------H--cCCCE-EeeCCcHHHHHHHHHHhCCCCCeEEE
Confidence            6999999999999999999999999987654321 10        0  12222 24776654433332   223699999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEeece
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~~  107 (314)
                      +++|.  ......++.++...++|.+++..
T Consensus       113 ~~~g~--~~~~~~~~~l~~~G~~v~~g~~~  140 (198)
T 1pqw_A          113 NSLAG--EAIQRGVQILAPGGRFIELGKKD  140 (198)
T ss_dssp             ECCCT--HHHHHHHHTEEEEEEEEECSCGG
T ss_pred             ECCch--HHHHHHHHHhccCCEEEEEcCCC
Confidence            99973  34556667676445888877643

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=97.59  E-value=0.00015  Score=58.29  Aligned_cols=64  Identities=14%  Similarity=0.208  Sum_probs=44.8

Q ss_pred             ccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChh----hHHHhhhcCCccEEEEc
Q 021331            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD----FVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~----~l~~~~~~~~~d~vi~~   79 (314)
                      ||.+|.++++.|..+|++|+.++|+..... ..+           .++..+  |+...+    .+.+.+.  ++|++||+
T Consensus        28 SG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-~~~-----------~~~~~~--~v~s~~em~~~v~~~~~--~~Dili~a   91 (232)
T 2gk4_A           28 TGHLGKIITETLLSAGYEVCLITTKRALKP-EPH-----------PNLSIR--EITNTKDLLIEMQERVQ--DYQVLIHS   91 (232)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEECTTSCCC-CCC-----------TTEEEE--ECCSHHHHHHHHHHHGG--GCSEEEEC
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEeCCccccc-cCC-----------CCeEEE--EHhHHHHHHHHHHHhcC--CCCEEEEc
Confidence            999999999999999999999999764311 011           345444  444433    3333344  79999999


Q ss_pred             CCCC
Q 021331           80 NGRE   83 (314)
Q Consensus        80 a~~~   83 (314)
                      |+..
T Consensus        92 AAvs   95 (232)
T 2gk4_A           92 MAVS   95 (232)
T ss_dssp             SBCC
T ss_pred             Cccc
Confidence            9974

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.57  E-value=1e-05  Score=69.47  Aligned_cols=141  Identities=11%  Similarity=0.089  Sum_probs=81.8

Q ss_pred             CCcccccHHHHHHHHHHCCC-------eEEEEEcC----CcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhh
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRG----KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS   69 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~   69 (314)
                      |||+|++|++++..|+..|+       +|++++++    .++.....     ..+.+  ....+ ..|+....++.++++
T Consensus        11 iGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~-----~dl~~--~~~~~-~~~i~~~~~~~~al~   82 (329)
T 1b8p_A           11 TGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVM-----MEIDD--CAFPL-LAGMTAHADPMTAFK   82 (329)
T ss_dssp             SSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHH-----HHHHT--TTCTT-EEEEEEESSHHHHTT
T ss_pred             ECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhH-----HHHhh--hcccc-cCcEEEecCcHHHhC
Confidence            79999999999999999885       79998887    32111000     00110  00111 235555566778888


Q ss_pred             cCCccEEEEcCCCCc--------------ccHHHHHHhCC--C-C-CcEEEEeece-e-----eccCCCCCccCccccch
Q 021331           70 AKGFDVVYDINGREA--------------DEVEPILDALP--N-L-EQFIYCSSAG-V-----YLKSDLLPHCESRHKGK  125 (314)
Q Consensus        70 ~~~~d~vi~~a~~~~--------------~~~~~~~~~~~--~-~-~~~i~~Ss~~-v-----~~~~~~~~~~e~~~~~k  125 (314)
                        ++|+|||+|+...              ..++++++.+.  . . .+||++|... +     .....+.|....++.+.
T Consensus        83 --~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~~~~~~p~~~v~g~t~  160 (329)
T 1b8p_A           83 --DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSAPSLPAKNFTAMLR  160 (329)
T ss_dssp             --TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCH
T ss_pred             --CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHHHcCCCCHHHEEEeec
Confidence              9999999998642              23556666655  2 3 3788887621 0     11111222222345555


Q ss_pred             hhHHH----HHHhcCCceEEEecCeeeCCC
Q 021331          126 LNTES----VLESKGVNWTSLRPVYIYGPL  151 (314)
Q Consensus       126 ~~~e~----~~~~~~~~~~ilR~~~v~g~~  151 (314)
                      ....+    +.+..+++...++...|+|.+
T Consensus       161 Ld~~r~~~~la~~lgv~~~~v~~~~v~G~H  190 (329)
T 1b8p_A          161 LDHNRALSQIAAKTGKPVSSIEKLFVWGNH  190 (329)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGEESCEEEBCS
T ss_pred             HHHHHHHHHHHHHhCcCHHHceEEEEEecc
Confidence            43322    234567777777777788853

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.54  E-value=6e-05  Score=56.03  Aligned_cols=68  Identities=9%  Similarity=0.131  Sum_probs=54.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHh-hhcCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~-~~~~~~d~vi~~a~   81 (314)
                      |.|.+|..+++.|.+.|++|++++++++......           ..++.++.+|.++++.+.++ +.  ++|.||-+.+
T Consensus        14 G~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~-----------~~g~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~~   80 (140)
T 3fwz_A           14 GYGRVGSLLGEKLLASDIPLVVIETSRTRVDELR-----------ERGVRAVLGNAANEEIMQLAHLE--CAKWLILTIP   80 (140)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-----------HTTCEEEESCTTSHHHHHHTTGG--GCSEEEECCS
T ss_pred             CcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-----------HcCCCEEECCCCCHHHHHhcCcc--cCCEEEEECC
Confidence            4599999999999999999999999987632111           15788899999999988775 44  7999998876


Q ss_pred             CC
Q 021331           82 RE   83 (314)
Q Consensus        82 ~~   83 (314)
                      ..
T Consensus        81 ~~   82 (140)
T 3fwz_A           81 NG   82 (140)
T ss_dssp             CH
T ss_pred             Ch
Confidence            53

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.54  E-value=4.6e-05  Score=68.32  Aligned_cols=70  Identities=20%  Similarity=0.118  Sum_probs=55.7

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      +|+ |++|+++++.|++. +++|++++|+.++......         . .++..+.+|+.|.+++.++++  ++|+|||+
T Consensus        29 iGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~---------~-~~~~~~~~D~~d~~~l~~~l~--~~DvVIn~   95 (467)
T 2axq_A           29 LGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAK---------P-SGSKAISLDVTDDSALDKVLA--DNDVVISL   95 (467)
T ss_dssp             ECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHG---------G-GTCEEEECCTTCHHHHHHHHH--TSSEEEEC
T ss_pred             ECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHH---------h-cCCcEEEEecCCHHHHHHHHc--CCCEEEEC
Confidence            476 99999999999998 7899999998765321111         1 246677899999999999998  99999999


Q ss_pred             CCCC
Q 021331           80 NGRE   83 (314)
Q Consensus        80 a~~~   83 (314)
                      ++..
T Consensus        96 tp~~   99 (467)
T 2axq_A           96 IPYT   99 (467)
T ss_dssp             SCGG
T ss_pred             Cchh
Confidence            8864

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.41  E-value=0.00015  Score=61.73  Aligned_cols=96  Identities=19%  Similarity=0.141  Sum_probs=59.0

Q ss_pred             CCcccccHHHHHHHHHHCCC--eEEEEEc--CCcccccCCCCCCchhhhh---cc-CceEEEEecCCChhhHHHhhhcCC
Q 021331            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTR--GKAPIAQQLPGESDQEFAE---FS-SKILHLKGDRKDYDFVKSSLSAKG   72 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~D~~d~~~l~~~~~~~~   72 (314)
                      |||+|++|++++..|+.++.  ++..+++  +.........     .+.+   +. ..+.+...    .+++.++++  +
T Consensus         6 ~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~-----dl~~~~~~~~~~~~i~~~----~d~l~~al~--g   74 (313)
T 1hye_A            6 IGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLRE-----DIYDALAGTRSDANIYVE----SDENLRIID--E   74 (313)
T ss_dssp             ETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHH-----HHHHHHTTSCCCCEEEEE----ETTCGGGGT--T
T ss_pred             ECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHH-----HHHHhHHhcCCCeEEEeC----CcchHHHhC--C
Confidence            69999999999999998874  6777877  3321110000     0000   00 12222221    123566788  9


Q ss_pred             ccEEEEcCCCC--------------cccHHHHHHhCC--CCCcEEEEeecee
Q 021331           73 FDVVYDINGRE--------------ADEVEPILDALP--NLEQFIYCSSAGV  108 (314)
Q Consensus        73 ~d~vi~~a~~~--------------~~~~~~~~~~~~--~~~~~i~~Ss~~v  108 (314)
                      +|+|||+|+..              ...++++++++.  . .++|+++|.-+
T Consensus        75 aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv  125 (313)
T 1hye_A           75 SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV  125 (313)
T ss_dssp             CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH
T ss_pred             CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH
Confidence            99999999863              234667777776  6 77888877543

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.39  E-value=2e-05  Score=66.80  Aligned_cols=93  Identities=16%  Similarity=0.129  Sum_probs=57.3

Q ss_pred             CCcccccHHHHHHHHHHCCC--eEEEEEc--CCcccccCCCCCCchhhhh---ccCceEEEEecCCChhhHHHhhhcCCc
Q 021331            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTR--GKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAKGF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~d~~~l~~~~~~~~~   73 (314)
                      |||+|++|.+++..|+.++.  +++.+++  +........     ..+.+   +...+++.. +  +    .++++  ++
T Consensus         6 iGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~-----~dl~~~~~~~~~~~v~~-~--~----~~a~~--~a   71 (303)
T 1o6z_A            6 VGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQA-----ADTNHGIAYDSNTRVRQ-G--G----YEDTA--GS   71 (303)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHH-----HHHHHHHTTTCCCEEEE-C--C----GGGGT--TC
T ss_pred             ECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHH-----HHHHHHHhhCCCcEEEe-C--C----HHHhC--CC
Confidence            68999999999999998875  6777777  432211000     01111   112333332 1  2    34577  99


Q ss_pred             cEEEEcCCCCc--------------ccHHHHHHhCC--CCCcEEEEeece
Q 021331           74 DVVYDINGREA--------------DEVEPILDALP--NLEQFIYCSSAG  107 (314)
Q Consensus        74 d~vi~~a~~~~--------------~~~~~~~~~~~--~~~~~i~~Ss~~  107 (314)
                      |+|||+++...              ..++++++++.  ....+|+++|.-
T Consensus        72 DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNP  121 (303)
T 1o6z_A           72 DVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNP  121 (303)
T ss_dssp             SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSS
T ss_pred             CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCCh
Confidence            99999998632              34666777766  456777777743

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.36  E-value=7.9e-05  Score=58.07  Aligned_cols=67  Identities=19%  Similarity=0.073  Sum_probs=53.3

Q ss_pred             cccccHHHHHHHHHHC-CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHh--hhcCCccEEEEc
Q 021331            3 GTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS--LSAKGFDVVYDI   79 (314)
Q Consensus         3 atG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~--~~~~~~d~vi~~   79 (314)
                      |.|.+|..+++.|.+. |++|++++++++......           ..++.++.+|.++++.+.++  +.  ++|.||.+
T Consensus        46 G~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~-----------~~g~~~~~gd~~~~~~l~~~~~~~--~ad~vi~~  112 (183)
T 3c85_A           46 GMGRIGTGAYDELRARYGKISLGIEIREEAAQQHR-----------SEGRNVISGDATDPDFWERILDTG--HVKLVLLA  112 (183)
T ss_dssp             CCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH-----------HTTCCEEECCTTCHHHHHTBCSCC--CCCEEEEC
T ss_pred             CCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH-----------HCCCCEEEcCCCCHHHHHhccCCC--CCCEEEEe
Confidence            3699999999999999 999999999876532111           14677888999998888776  65  89999987


Q ss_pred             CCC
Q 021331           80 NGR   82 (314)
Q Consensus        80 a~~   82 (314)
                      .+.
T Consensus       113 ~~~  115 (183)
T 3c85_A          113 MPH  115 (183)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            764

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=97.35  E-value=0.00032  Score=60.55  Aligned_cols=82  Identities=12%  Similarity=0.043  Sum_probs=62.1

Q ss_pred             CCcccccHHHHHHHHH-HCCCeEEEEEcCCcccccCCCC-------CCchhhhhccCceEEEEecCCChhhHHHhhhcC-
Q 021331            1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKAPIAQQLPG-------ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-   71 (314)
                      ||||..+|.+.+..|. ..|..|+++++..+........       ...+.++..+.....+.+|+.+++.++++++.. 
T Consensus        56 tGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~vi~~i~  135 (401)
T 4ggo_A           56 LGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQVIEEAK  135 (401)
T ss_dssp             ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             ECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHHHHHHH
Confidence            7999999999999987 6799999999877654332210       011344555678899999999998888877642 


Q ss_pred             ----CccEEEEcCCC
Q 021331           72 ----GFDVVYDINGR   82 (314)
Q Consensus        72 ----~~d~vi~~a~~   82 (314)
                          ++|++||+++.
T Consensus       136 ~~~G~IDiLVhS~A~  150 (401)
T 4ggo_A          136 KKGIKFDLIVYSLAS  150 (401)
T ss_dssp             HTTCCEEEEEECCCC
T ss_pred             HhcCCCCEEEEeccc
Confidence                69999999885

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=97.35  E-value=0.00029  Score=56.40  Aligned_cols=64  Identities=11%  Similarity=0.114  Sum_probs=45.3

Q ss_pred             ccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhh-cC-CccEEEEcCC
Q 021331            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS-AK-GFDVVYDING   81 (314)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~-~~-~~d~vi~~a~   81 (314)
                      ||.+|.++++.|.++|++|++++++... .  .+           .++.  .+|+.+.+++.+.+. .. ++|++||+||
T Consensus        33 Sg~iG~aiA~~~~~~Ga~V~l~~~~~~l-~--~~-----------~g~~--~~dv~~~~~~~~~v~~~~~~~Dili~~Aa   96 (226)
T 1u7z_A           33 SGKMGFAIAAAAARRGANVTLVSGPVSL-P--TP-----------PFVK--RVDVMTALEMEAAVNASVQQQNIFIGCAA   96 (226)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEECSCCC-C--CC-----------TTEE--EEECCSHHHHHHHHHHHGGGCSEEEECCB
T ss_pred             ccHHHHHHHHHHHHCCCEEEEEECCccc-c--cC-----------CCCe--EEccCcHHHHHHHHHHhcCCCCEEEECCc
Confidence            7999999999999999999999876521 1  11           2333  467877654444332 11 6999999999


Q ss_pred             CC
Q 021331           82 RE   83 (314)
Q Consensus        82 ~~   83 (314)
                      ..
T Consensus        97 v~   98 (226)
T 1u7z_A           97 VA   98 (226)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.28  E-value=0.00016  Score=57.97  Aligned_cols=69  Identities=17%  Similarity=0.279  Sum_probs=54.4

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHh-hhcCCccEEEEcC
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDIN   80 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~-~~~~~~d~vi~~a   80 (314)
                      | .|.+|..+++.|.+.|++|++++++++.......          ..++.++.+|.++++.+.++ +.  ++|+||-+.
T Consensus         7 G-~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~----------~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~   73 (218)
T 3l4b_C            7 G-GETTAYYLARSMLSRKYGVVIINKDRELCEEFAK----------KLKATIIHGDGSHKEILRDAEVS--KNDVVVILT   73 (218)
T ss_dssp             C-CHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----------HSSSEEEESCTTSHHHHHHHTCC--TTCEEEECC
T ss_pred             C-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH----------HcCCeEEEcCCCCHHHHHhcCcc--cCCEEEEec
Confidence            5 4999999999999999999999998765321110          13678899999999988886 55  899999776


Q ss_pred             CCC
Q 021331           81 GRE   83 (314)
Q Consensus        81 ~~~   83 (314)
                      +..
T Consensus        74 ~~d   76 (218)
T 3l4b_C           74 PRD   76 (218)
T ss_dssp             SCH
T ss_pred             CCc
Confidence            643

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.14  E-value=0.00024  Score=61.86  Aligned_cols=92  Identities=12%  Similarity=0.093  Sum_probs=63.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      +|+ |.+|..+++.|...|++|++++|+++.....         .+. .+.. +.+|..+.+.+.+++.  ++|+||+++
T Consensus       172 iGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~---------~~~-~g~~-~~~~~~~~~~l~~~~~--~~DvVi~~~  237 (369)
T 2eez_A          172 LGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYL---------DDV-FGGR-VITLTATEANIKKSVQ--HADLLIGAV  237 (369)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHH-TTTS-EEEEECCHHHHHHHHH--HCSEEEECC
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHH---------HHh-cCce-EEEecCCHHHHHHHHh--CCCEEEECC
Confidence            477 9999999999999999999999987543210         000 1111 4567778888888888  899999998


Q ss_pred             CCCcc-----cHHHHHHhCCCCCcEEEEeec
Q 021331           81 GREAD-----EVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        81 ~~~~~-----~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      +....     -.+..++.++....+|.+|+.
T Consensus       238 g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~  268 (369)
T 2eez_A          238 LVPGAKAPKLVTRDMLSLMKEGAVIVDVAVD  268 (369)
T ss_dssp             C-------CCSCHHHHTTSCTTCEEEECC--
T ss_pred             CCCccccchhHHHHHHHhhcCCCEEEEEecC
Confidence            85421     245677777755678888764

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.10  E-value=0.00044  Score=59.12  Aligned_cols=91  Identities=16%  Similarity=0.136  Sum_probs=61.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhh---hcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL---SAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~---~~~~~d~vi   77 (314)
                      +||+|.+|..+++.+...|++|+++++++++... .        .+  .+.. ...|..+.+..+.+.   ...++|++|
T Consensus       147 ~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~-~--------~~--~g~~-~~~~~~~~~~~~~~~~~~~~~~~D~vi  214 (327)
T 1qor_A          147 HAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS-A--------LK--AGAW-QVINYREEDLVERLKEITGGKKVRVVY  214 (327)
T ss_dssp             SSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHH-H--------HH--HTCS-EEEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-H--------HH--cCCC-EEEECCCccHHHHHHHHhCCCCceEEE
Confidence            6899999999999999999999999987654221 0        11  1122 124666654433333   223699999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +++|  .......++.++...+++.+++
T Consensus       215 ~~~g--~~~~~~~~~~l~~~G~iv~~g~  240 (327)
T 1qor_A          215 DSVG--RDTWERSLDCLQRRGLMVSFGN  240 (327)
T ss_dssp             ECSC--GGGHHHHHHTEEEEEEEEECCC
T ss_pred             ECCc--hHHHHHHHHHhcCCCEEEEEec
Confidence            9998  4455667777775558887765

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.08  E-value=0.00061  Score=58.39  Aligned_cols=91  Identities=19%  Similarity=0.176  Sum_probs=60.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhH---HHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV---KSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l---~~~~~~~~~d~vi   77 (314)
                      +||+|.+|..+++.+...|++|++++|+.++... +        .+.  +.. ...|..+.+..   .+.....++|++|
T Consensus       152 ~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~-~--------~~~--g~~-~~~d~~~~~~~~~i~~~~~~~~~d~vi  219 (333)
T 1wly_A          152 HAAAGGMGHIMVPWARHLGATVIGTVSTEEKAET-A--------RKL--GCH-HTINYSTQDFAEVVREITGGKGVDVVY  219 (333)
T ss_dssp             TTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHH-H--------HHH--TCS-EEEETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H--------HHc--CCC-EEEECCCHHHHHHHHHHhCCCCCeEEE
Confidence            6899999999999999999999999998654221 1        111  122 12466654433   3333223699999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +++|.  ......++.++...+++.++.
T Consensus       220 ~~~g~--~~~~~~~~~l~~~G~iv~~g~  245 (333)
T 1wly_A          220 DSIGK--DTLQKSLDCLRPRGMCAAYGH  245 (333)
T ss_dssp             ECSCT--TTHHHHHHTEEEEEEEEECCC
T ss_pred             ECCcH--HHHHHHHHhhccCCEEEEEec
Confidence            99986  445666777774457776654

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=96.91  E-value=0.00039  Score=60.04  Aligned_cols=92  Identities=10%  Similarity=-0.005  Sum_probs=58.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc---CCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~---~~~d~vi   77 (314)
                      +||+|.+|..+++.+...|.+|++++|+.++... .        .+  .+.. ...|+.+.+++.+.+.+   .++|+||
T Consensus       176 ~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~-~--------~~--~g~~-~~~d~~~~~~~~~~~~~~~~~~~D~vi  243 (347)
T 2hcy_A          176 SGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEEL-F--------RS--IGGE-VFIDFTKEKDIVGAVLKATDGGAHGVI  243 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHH-H--------HH--TTCC-EEEETTTCSCHHHHHHHHHTSCEEEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHH-H--------HH--cCCc-eEEecCccHhHHHHHHHHhCCCCCEEE
Confidence            5899999999999999999999999988765321 1        11  1222 22477644444433321   1799999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ++++. .......++.++...+++.+++
T Consensus       244 ~~~g~-~~~~~~~~~~l~~~G~iv~~g~  270 (347)
T 2hcy_A          244 NVSVS-EAAIEASTRYVRANGTTVLVGM  270 (347)
T ss_dssp             ECSSC-HHHHHHHTTSEEEEEEEEECCC
T ss_pred             ECCCc-HHHHHHHHHHHhcCCEEEEEeC
Confidence            99884 1233445555554457777665

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=96.90  E-value=0.00057  Score=58.87  Aligned_cols=92  Identities=17%  Similarity=0.103  Sum_probs=61.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChh---hHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~l~~~~~~~~~d~vi   77 (314)
                      +||+|.+|..+++.+...|++|+++++++++....         .+  .+... ..|..+.+   .+.++....++|+||
T Consensus       173 ~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~---------~~--~ga~~-~~d~~~~~~~~~~~~~~~~~~~d~vi  240 (343)
T 2eih_A          173 MAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRA---------KA--LGADE-TVNYTHPDWPKEVRRLTGGKGADKVV  240 (343)
T ss_dssp             CSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH---------HH--HTCSE-EEETTSTTHHHHHHHHTTTTCEEEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------Hh--cCCCE-EEcCCcccHHHHHHHHhCCCCceEEE
Confidence            68999999999999999999999999886553211         11  12222 24666543   233333223699999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEeec
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      +++|  .......++.++...+++.+++.
T Consensus       241 ~~~g--~~~~~~~~~~l~~~G~~v~~g~~  267 (343)
T 2eih_A          241 DHTG--ALYFEGVIKATANGGRIAIAGAS  267 (343)
T ss_dssp             ESSC--SSSHHHHHHHEEEEEEEEESSCC
T ss_pred             ECCC--HHHHHHHHHhhccCCEEEEEecC
Confidence            9999  34566777777744588876653

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=96.80  E-value=0.0019  Score=48.84  Aligned_cols=78  Identities=15%  Similarity=0.118  Sum_probs=53.4

Q ss_pred             ccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh--hhHHHhhhc----CCccEEE
Q 021331            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY--DFVKSSLSA----KGFDVVY   77 (314)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~--~~l~~~~~~----~~~d~vi   77 (314)
                      +|.++.+.++.|.+.|.+|++..|+...... .+ .....+...+.....+.+|++++  +++.++++.    .+-|++|
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~-~~-~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLV  102 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDA-HP-DEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLV  102 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTS-CT-THHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccc-cc-cHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Confidence            5789999999999999999988776544211 10 01112233344566778899998  877776642    3449999


Q ss_pred             EcCCCC
Q 021331           78 DINGRE   83 (314)
Q Consensus        78 ~~a~~~   83 (314)
                      ||+|..
T Consensus       103 nnAgg~  108 (157)
T 3gxh_A          103 HCLANY  108 (157)
T ss_dssp             ECSBSH
T ss_pred             ECCCCC
Confidence            999864

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=96.75  E-value=0.00038  Score=59.70  Aligned_cols=92  Identities=14%  Similarity=0.245  Sum_probs=59.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc---CCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~---~~~d~vi   77 (314)
                      +||+|.+|..+++.+...|++|++++++.+..... .        +  .+.. ..+|..+.+++.+.+.+   .++|++|
T Consensus       152 ~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~--------~--~g~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi  219 (333)
T 1v3u_A          152 SAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-K--------Q--IGFD-AAFNYKTVNSLEEALKKASPDGYDCYF  219 (333)
T ss_dssp             ESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H--------H--TTCS-EEEETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred             ecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-H--------h--cCCc-EEEecCCHHHHHHHHHHHhCCCCeEEE
Confidence            58999999999999999999999999876543211 0        1  1221 23477663333333321   2699999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEeec
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      +++|.  ......++.++...+++.++..
T Consensus       220 ~~~g~--~~~~~~~~~l~~~G~~v~~g~~  246 (333)
T 1v3u_A          220 DNVGG--EFLNTVLSQMKDFGKIAICGAI  246 (333)
T ss_dssp             ESSCH--HHHHHHHTTEEEEEEEEECCCC
T ss_pred             ECCCh--HHHHHHHHHHhcCCEEEEEecc
Confidence            99985  2244455555544578876653

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=96.71  E-value=0.0015  Score=56.50  Aligned_cols=91  Identities=13%  Similarity=0.135  Sum_probs=60.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHh---hhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS---LSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~---~~~~~~d~vi   77 (314)
                      +||+|.+|..+++.+...|++|++++++.++....         .+.  +.. ..+|..+.+..+++   ....++|++|
T Consensus       169 ~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~---------~~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi  236 (354)
T 2j8z_A          169 HAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA---------EKL--GAA-AGFNYKKEDFSEATLKFTKGAGVNLIL  236 (354)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHH--TCS-EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             ECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---------HHc--CCc-EEEecCChHHHHHHHHHhcCCCceEEE
Confidence            68999999999999999999999999886553211         111  222 23466655433333   3223699999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +++|..  .....++.++...+++.++.
T Consensus       237 ~~~G~~--~~~~~~~~l~~~G~iv~~G~  262 (354)
T 2j8z_A          237 DCIGGS--YWEKNVNCLALDGRWVLYGL  262 (354)
T ss_dssp             ESSCGG--GHHHHHHHEEEEEEEEECCC
T ss_pred             ECCCch--HHHHHHHhccCCCEEEEEec
Confidence            999863  45556677775457776654

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=96.63  E-value=0.002  Score=55.19  Aligned_cols=91  Identities=21%  Similarity=0.224  Sum_probs=60.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChh---hHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~l~~~~~~~~~d~vi   77 (314)
                      +||+|.+|..+++.+...|.+|++++++.++... .        .+  .+... ..|..+.+   .+.+.....++|+||
T Consensus       155 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~--------~~--~ga~~-~~~~~~~~~~~~~~~~~~~~g~D~vi  222 (334)
T 3qwb_A          155 FAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKI-A--------KE--YGAEY-LINASKEDILRQVLKFTNGKGVDASF  222 (334)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHH-H--------HH--TTCSE-EEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H--------HH--cCCcE-EEeCCCchHHHHHHHHhCCCCceEEE
Confidence            5889999999999999999999999997655321 1        11  12211 23554443   333333334799999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +++|.  ......++.++...+++.++.
T Consensus       223 d~~g~--~~~~~~~~~l~~~G~iv~~G~  248 (334)
T 3qwb_A          223 DSVGK--DTFEISLAALKRKGVFVSFGN  248 (334)
T ss_dssp             ECCGG--GGHHHHHHHEEEEEEEEECCC
T ss_pred             ECCCh--HHHHHHHHHhccCCEEEEEcC
Confidence            99985  445667777775567787654

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=96.60  E-value=0.00083  Score=57.85  Aligned_cols=92  Identities=13%  Similarity=0.166  Sum_probs=58.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhh---cCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS---AKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~---~~~~d~vi   77 (314)
                      +||+|.+|..+++.+...|++|++++++.++......        +  .+... ..|..+.+++.+.+.   ..++|+||
T Consensus       162 ~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~--------~--~g~~~-~~d~~~~~~~~~~~~~~~~~~~d~vi  230 (345)
T 2j3h_A          162 SAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT--------K--FGFDD-AFNYKEESDLTAALKRCFPNGIDIYF  230 (345)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH--------T--SCCSE-EEETTSCSCSHHHHHHHCTTCEEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------H--cCCce-EEecCCHHHHHHHHHHHhCCCCcEEE
Confidence            6899999999999999999999999988655321100        0  12221 236655322222222   13699999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +++|.  ......++.++...+++.++.
T Consensus       231 ~~~g~--~~~~~~~~~l~~~G~~v~~G~  256 (345)
T 2j3h_A          231 ENVGG--KMLDAVLVNMNMHGRIAVCGM  256 (345)
T ss_dssp             ESSCH--HHHHHHHTTEEEEEEEEECCC
T ss_pred             ECCCH--HHHHHHHHHHhcCCEEEEEcc
Confidence            99985  344455566664457776654

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=96.57  E-value=0.0018  Score=55.24  Aligned_cols=91  Identities=16%  Similarity=0.076  Sum_probs=59.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChh---hHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~l~~~~~~~~~d~vi   77 (314)
                      +||+|.+|..+++.+...|.+|+++++++++... .        .+  .+... ..|..+.+   .+.+.....++|+||
T Consensus       147 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~--------~~--~Ga~~-~~~~~~~~~~~~~~~~~~~~g~Dvvi  214 (325)
T 3jyn_A          147 HAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAH-A--------KA--LGAWE-TIDYSHEDVAKRVLELTDGKKCPVVY  214 (325)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH-H--------HH--HTCSE-EEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             EcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H--------HH--cCCCE-EEeCCCccHHHHHHHHhCCCCceEEE
Confidence            5899999999999999999999999987665321 1        11  12211 23555543   333333334799999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +++|.  ......++.++...+++.++.
T Consensus       215 d~~g~--~~~~~~~~~l~~~G~iv~~g~  240 (325)
T 3jyn_A          215 DGVGQ--DTWLTSLDSVAPRGLVVSFGN  240 (325)
T ss_dssp             ESSCG--GGHHHHHTTEEEEEEEEECCC
T ss_pred             ECCCh--HHHHHHHHHhcCCCEEEEEec
Confidence            99985  445556666665567777654

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.47  E-value=0.00093  Score=54.14  Aligned_cols=65  Identities=14%  Similarity=-0.023  Sum_probs=52.2

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHh-hhcCCccEEEEcC
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDIN   80 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~-~~~~~~d~vi~~a   80 (314)
                      |+ |.+|..+++.|.+.|+ |++++++++....         +   ..++.++.+|.++++.+.++ +.  ++|.||.+.
T Consensus        16 G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~---------~---~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~   79 (234)
T 2aef_A           16 GW-SESTLECLRELRGSEV-FVLAEDENVRKKV---------L---RSGANFVHGDPTRVSDLEKANVR--GARAVIVDL   79 (234)
T ss_dssp             SC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHH---------H---HTTCEEEESCTTCHHHHHHTTCT--TCSEEEECC
T ss_pred             CC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHH---------H---hcCCeEEEcCCCCHHHHHhcCcc--hhcEEEEcC
Confidence            54 9999999999999999 9999888665321         1   13588999999999998877 66  899999876


Q ss_pred             CC
Q 021331           81 GR   82 (314)
Q Consensus        81 ~~   82 (314)
                      +.
T Consensus        80 ~~   81 (234)
T 2aef_A           80 ES   81 (234)
T ss_dssp             SC
T ss_pred             CC
Confidence            54

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=96.47  E-value=0.002  Score=54.35  Aligned_cols=87  Identities=15%  Similarity=0.160  Sum_probs=57.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCC-hhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~l~~~~~~~~~d~vi~~   79 (314)
                      +||+|.+|..+++.+...|.+|+++++++++....         .+  .+... ..|..+ .+ +.+.+.  ++|+||+ 
T Consensus       132 ~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~---------~~--~ga~~-~~~~~~~~~-~~~~~~--~~d~vid-  195 (302)
T 1iz0_A          132 QAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP---------LA--LGAEE-AATYAEVPE-RAKAWG--GLDLVLE-  195 (302)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH---------HH--TTCSE-EEEGGGHHH-HHHHTT--SEEEEEE-
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------Hh--cCCCE-EEECCcchh-HHHHhc--CceEEEE-
Confidence            58999999999999999999999999976653211         11  12222 245554 33 334445  8999999 


Q ss_pred             CCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           80 NGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        80 a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +|.  ......++.++...+++.++.
T Consensus       196 ~g~--~~~~~~~~~l~~~G~~v~~g~  219 (302)
T 1iz0_A          196 VRG--KEVEESLGLLAHGGRLVYIGA  219 (302)
T ss_dssp             CSC--TTHHHHHTTEEEEEEEEEC--
T ss_pred             CCH--HHHHHHHHhhccCCEEEEEeC
Confidence            876  345566666664457776654

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.46  E-value=0.028  Score=46.50  Aligned_cols=27  Identities=19%  Similarity=0.115  Sum_probs=21.9

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTR   27 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~~r   27 (314)
                      +|++|.+|+.+++.+.+. +++++++..
T Consensus        11 ~Ga~G~mG~~~~~~~~~~~~~elva~~d   38 (273)
T 1dih_A           11 AGAGGRMGRQLIQAALALEGVQLGAALE   38 (273)
T ss_dssp             TTTTSHHHHHHHHHHHHSTTEECCCEEC
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            588999999999998865 788885544

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=96.44  E-value=0.0022  Score=55.48  Aligned_cols=92  Identities=15%  Similarity=0.167  Sum_probs=59.5

Q ss_pred             CCcccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhh---HHHhhhcCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~---l~~~~~~~~~d~v   76 (314)
                      +||+|.+|..+++.+...|+ +|++++++.++.....         + ..+.. ..+|..+.+.   +.+.... ++|++
T Consensus       167 ~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~---------~-~~g~~-~~~d~~~~~~~~~~~~~~~~-~~d~v  234 (357)
T 2zb4_A          167 SGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLT---------S-ELGFD-AAINYKKDNVAEQLRESCPA-GVDVY  234 (357)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH---------H-TSCCS-EEEETTTSCHHHHHHHHCTT-CEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH---------H-HcCCc-eEEecCchHHHHHHHHhcCC-CCCEE
Confidence            69999999999999999999 9999998865422110         0 01122 2346665432   3333222 69999


Q ss_pred             EEcCCCCcccHHHHHHhCCCCCcEEEEeec
Q 021331           77 YDINGREADEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        77 i~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      |+++|.  ......++.++...+++.++..
T Consensus       235 i~~~G~--~~~~~~~~~l~~~G~iv~~G~~  262 (357)
T 2zb4_A          235 FDNVGG--NISDTVISQMNENSHIILCGQI  262 (357)
T ss_dssp             EESCCH--HHHHHHHHTEEEEEEEEECCCG
T ss_pred             EECCCH--HHHHHHHHHhccCcEEEEECCc
Confidence            999984  3445566666644588876654

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=96.42  E-value=0.0017  Score=55.61  Aligned_cols=94  Identities=18%  Similarity=0.266  Sum_probs=60.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhh--cCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS--AKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~--~~~~d~vi~   78 (314)
                      +||+|.+|..+++.+...|.+|+++++++++......        +  .+... ..|..+.+..+.+.+  ..++|++|+
T Consensus       156 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~--------~--~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~  224 (336)
T 4b7c_A          156 SGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE--------E--LGFDG-AIDYKNEDLAAGLKRECPKGIDVFFD  224 (336)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH--------T--TCCSE-EEETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------H--cCCCE-EEECCCHHHHHHHHHhcCCCceEEEE
Confidence            6999999999999999999999999988765321100        0  12221 246655443333222  136999999


Q ss_pred             cCCCCcccHHHHHHhCCCCCcEEEEeece
Q 021331           79 INGREADEVEPILDALPNLEQFIYCSSAG  107 (314)
Q Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~i~~Ss~~  107 (314)
                      ++|.  ......++.++...+++.++...
T Consensus       225 ~~g~--~~~~~~~~~l~~~G~iv~~G~~~  251 (336)
T 4b7c_A          225 NVGG--EILDTVLTRIAFKARIVLCGAIS  251 (336)
T ss_dssp             SSCH--HHHHHHHTTEEEEEEEEECCCGG
T ss_pred             CCCc--chHHHHHHHHhhCCEEEEEeecc
Confidence            9984  34455556666456888776644

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.42  E-value=0.0005  Score=54.77  Aligned_cols=78  Identities=14%  Similarity=0.093  Sum_probs=47.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      +||+|.+|..+++.|.+.|++|++++|+++.......     .+   ...+.  ..|+. ..++.++++  ++|+||++.
T Consensus         6 iGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~-----~~---~~~~~--~~~~~-~~~~~~~~~--~~D~Vi~~~   72 (212)
T 1jay_A            6 LGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAA-----EY---RRIAG--DASIT-GMKNEDAAE--ACDIAVLTI   72 (212)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHH-----HH---HHHHS--SCCEE-EEEHHHHHH--HCSEEEECS
T ss_pred             EcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----Hh---ccccc--cCCCC-hhhHHHHHh--cCCEEEEeC
Confidence            4789999999999999999999999998654221100     00   00000  01121 234556677  899999998


Q ss_pred             CCCcccHHHHHHh
Q 021331           81 GREADEVEPILDA   93 (314)
Q Consensus        81 ~~~~~~~~~~~~~   93 (314)
                      ..  .....+++.
T Consensus        73 ~~--~~~~~~~~~   83 (212)
T 1jay_A           73 PW--EHAIDTARD   83 (212)
T ss_dssp             CH--HHHHHHHHH
T ss_pred             Ch--hhHHHHHHH
Confidence            64  223344443

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.40  E-value=0.0041  Score=53.57  Aligned_cols=91  Identities=18%  Similarity=0.217  Sum_probs=60.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChh---hHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~l~~~~~~~~~d~vi   77 (314)
                      +||+|.+|..+++.+...|.+|++++++.++....         .+  .+... ..|..+.+   .+.++....++|+||
T Consensus       171 ~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~---------~~--~Ga~~-~~~~~~~~~~~~v~~~~~~~g~D~vi  238 (349)
T 3pi7_A          171 TAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALL---------KD--IGAAH-VLNEKAPDFEATLREVMKAEQPRIFL  238 (349)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHH---------HH--HTCSE-EEETTSTTHHHHHHHHHHHHCCCEEE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HH--cCCCE-EEECCcHHHHHHHHHHhcCCCCcEEE
Confidence            58999999999999999999999999877653211         11  12221 23554433   233333223799999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +++|..  .....++.++...+++.+++
T Consensus       239 d~~g~~--~~~~~~~~l~~~G~iv~~G~  264 (349)
T 3pi7_A          239 DAVTGP--LASAIFNAMPKRARWIIYGR  264 (349)
T ss_dssp             ESSCHH--HHHHHHHHSCTTCEEEECCC
T ss_pred             ECCCCh--hHHHHHhhhcCCCEEEEEec
Confidence            999853  24567777776678887664

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.33  E-value=0.0019  Score=57.00  Aligned_cols=67  Identities=18%  Similarity=0.258  Sum_probs=54.5

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHh-hhcCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~-~~~~~~d~vi~~a~   81 (314)
                      |.|.+|..+++.|.+.|++|++++++++......           ..++.++.+|.++++.+..+ +.  ++|+||-+.+
T Consensus        11 G~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~-----------~~g~~vi~GDat~~~~L~~agi~--~A~~viv~~~   77 (413)
T 3l9w_A           11 GFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLR-----------KFGMKVFYGDATRMDLLESAGAA--KAEVLINAID   77 (413)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH-----------HTTCCCEESCTTCHHHHHHTTTT--TCSEEEECCS
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-----------hCCCeEEEcCCCCHHHHHhcCCC--ccCEEEECCC
Confidence            3599999999999999999999999987632111           14688899999999998887 55  8999998776


Q ss_pred             C
Q 021331           82 R   82 (314)
Q Consensus        82 ~   82 (314)
                      .
T Consensus        78 ~   78 (413)
T 3l9w_A           78 D   78 (413)
T ss_dssp             S
T ss_pred             C
Confidence            4

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=96.28  E-value=0.0035  Score=53.86  Aligned_cols=91  Identities=14%  Similarity=0.125  Sum_probs=57.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCC-C-hhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-D-YDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-d-~~~l~~~~~~~~~d~vi~   78 (314)
                      +||+|.+|..+++.+...|.+|++++++.++...         ..++  +...+ .|.. + .+.+.+.....++|+||+
T Consensus       166 ~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~~--ga~~v-~~~~~~~~~~v~~~~~~~g~Dvvid  233 (342)
T 4eye_A          166 LGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEF---------VKSV--GADIV-LPLEEGWAKAVREATGGAGVDMVVD  233 (342)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH---------HHHH--TCSEE-EESSTTHHHHHHHHTTTSCEEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHhc--CCcEE-ecCchhHHHHHHHHhCCCCceEEEE
Confidence            5899999999999999999999999998765321         1111  12211 2333 1 123334433336999999


Q ss_pred             cCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           79 INGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ++|..  .....++.++...+++.++.
T Consensus       234 ~~g~~--~~~~~~~~l~~~G~iv~~G~  258 (342)
T 4eye_A          234 PIGGP--AFDDAVRTLASEGRLLVVGF  258 (342)
T ss_dssp             SCC----CHHHHHHTEEEEEEEEEC--
T ss_pred             CCchh--HHHHHHHhhcCCCEEEEEEc
Confidence            99863  45566676765557776654

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=96.26  E-value=0.0034  Score=53.27  Aligned_cols=70  Identities=23%  Similarity=0.283  Sum_probs=45.1

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcccccCCCCCCchhhhhccC--ceEEEEecCCChhhHHHhhhcCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSS--KILHLKGDRKDYDFVKSSLSAKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~d~~~l~~~~~~~~~d~v   76 (314)
                      +||+|++|..++..|+..|  .+|+++++++....  .     ..+.+...  .+..+.    ...+++++++  ++|+|
T Consensus         6 iGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~--a-----~dL~~~~~~~~l~~~~----~t~d~~~a~~--~aDvV   72 (314)
T 1mld_A            6 LGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--A-----ADLSHIETRATVKGYL----GPEQLPDCLK--GCDVV   72 (314)
T ss_dssp             ETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--H-----HHHTTSSSSCEEEEEE----SGGGHHHHHT--TCSEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHH--H-----HHHhccCcCceEEEec----CCCCHHHHhC--CCCEE
Confidence            5889999999999999888  79999999862110  0     01111001  111110    1234667788  99999


Q ss_pred             EEcCCCC
Q 021331           77 YDINGRE   83 (314)
Q Consensus        77 i~~a~~~   83 (314)
                      |+++|..
T Consensus        73 vi~ag~~   79 (314)
T 1mld_A           73 VIPAGVP   79 (314)
T ss_dssp             EECCSCC
T ss_pred             EECCCcC
Confidence            9999864

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=96.19  E-value=0.0046  Score=53.60  Aligned_cols=92  Identities=22%  Similarity=0.154  Sum_probs=59.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhh---cCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS---AKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~---~~~~d~vi   77 (314)
                      +||+|.+|..+++.+...|++|+++++++++... +        .+  .+... ..|..+.+ +.+.+.   ..++|+||
T Consensus       170 ~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~-~--------~~--~Ga~~-~~~~~~~~-~~~~~~~~~~~g~D~vi  236 (362)
T 2c0c_A          170 TAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAF-L--------KS--LGCDR-PINYKTEP-VGTVLKQEYPEGVDVVY  236 (362)
T ss_dssp             TTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHH-H--------HH--TTCSE-EEETTTSC-HHHHHHHHCTTCEEEEE
T ss_pred             eCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH-H--------HH--cCCcE-EEecCChh-HHHHHHHhcCCCCCEEE
Confidence            5899999999999999999999999988654321 1        11  12222 23554432 222221   13699999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEeece
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~~  107 (314)
                      +++|.  ......++.++...+++.+++..
T Consensus       237 d~~g~--~~~~~~~~~l~~~G~iv~~g~~~  264 (362)
T 2c0c_A          237 ESVGG--AMFDLAVDALATKGRLIVIGFIS  264 (362)
T ss_dssp             ECSCT--HHHHHHHHHEEEEEEEEECCCGG
T ss_pred             ECCCH--HHHHHHHHHHhcCCEEEEEeCCC
Confidence            99985  34556677777545888877643

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=96.18  E-value=0.0046  Score=53.34  Aligned_cols=90  Identities=18%  Similarity=0.154  Sum_probs=58.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChh---hHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~l~~~~~~~~~d~vi   77 (314)
                      +||+|.+|..+++.+...|.+|+++++++++....         .+  .+... ..|..+.+   .+.+.. ..++|+||
T Consensus       174 ~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~---------~~--lGa~~-~~~~~~~~~~~~~~~~~-~~g~Dvvi  240 (353)
T 4dup_A          174 HGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEAC---------ER--LGAKR-GINYRSEDFAAVIKAET-GQGVDIIL  240 (353)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH---------HH--HTCSE-EEETTTSCHHHHHHHHH-SSCEEEEE
T ss_pred             EcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---------Hh--cCCCE-EEeCCchHHHHHHHHHh-CCCceEEE
Confidence            58999999999999999999999999887653211         11  11221 23555443   233332 34799999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +++|..  .....++.++...+++.++.
T Consensus       241 d~~g~~--~~~~~~~~l~~~G~iv~~g~  266 (353)
T 4dup_A          241 DMIGAA--YFERNIASLAKDGCLSIIAF  266 (353)
T ss_dssp             ESCCGG--GHHHHHHTEEEEEEEEECCC
T ss_pred             ECCCHH--HHHHHHHHhccCCEEEEEEe
Confidence            999853  45556666664457776554

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=96.16  E-value=0.0029  Score=54.64  Aligned_cols=91  Identities=11%  Similarity=0.156  Sum_probs=58.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHH---hhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS---SLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~---~~~~~~~d~vi   77 (314)
                      +||+|.+|..+++.+...|++|+++++++++... .        .+  .+.. ...|..+.+..++   .....++|+||
T Consensus       177 ~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~--------~~--~ga~-~~~d~~~~~~~~~~~~~~~~~~~D~vi  244 (351)
T 1yb5_A          177 HGASGGVGLAACQIARAYGLKILGTAGTEEGQKI-V--------LQ--NGAH-EVFNHREVNYIDKIKKYVGEKGIDIII  244 (351)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-H--------HH--TTCS-EEEETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHH-H--------HH--cCCC-EEEeCCCchHHHHHHHHcCCCCcEEEE
Confidence            5899999999999999999999999988665321 1        00  1222 2246665543333   33223699999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +++|..  .....++.++...+++.++.
T Consensus       245 ~~~G~~--~~~~~~~~l~~~G~iv~~g~  270 (351)
T 1yb5_A          245 EMLANV--NLSKDLSLLSHGGRVIVVGS  270 (351)
T ss_dssp             ESCHHH--HHHHHHHHEEEEEEEEECCC
T ss_pred             ECCChH--HHHHHHHhccCCCEEEEEec
Confidence            999842  34455666664457776653

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=96.05  E-value=0.0076  Score=51.67  Aligned_cols=91  Identities=14%  Similarity=0.046  Sum_probs=57.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChh---hHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~l~~~~~~~~~d~vi   77 (314)
                      +||+|.+|..+++.+...|.+|++++++.++...         ..+  .+... ..|..+.+   .+.+.....++|+||
T Consensus       151 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~--lga~~-~~~~~~~~~~~~~~~~~~~~g~Dvvi  218 (340)
T 3gms_A          151 NACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEE---------LLR--LGAAY-VIDTSTAPLYETVMELTNGIGADAAI  218 (340)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHH---------HHH--HTCSE-EEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             eCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHh--CCCcE-EEeCCcccHHHHHHHHhCCCCCcEEE
Confidence            5888999999999999899999999988765321         111  12221 23555443   333333334799999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +++|...  ....++.++...+++.++.
T Consensus       219 d~~g~~~--~~~~~~~l~~~G~iv~~G~  244 (340)
T 3gms_A          219 DSIGGPD--GNELAFSLRPNGHFLTIGL  244 (340)
T ss_dssp             ESSCHHH--HHHHHHTEEEEEEEEECCC
T ss_pred             ECCCChh--HHHHHHHhcCCCEEEEEee
Confidence            9998532  3344555554457776654

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=95.95  E-value=0.024  Score=47.51  Aligned_cols=32  Identities=16%  Similarity=0.391  Sum_probs=22.8

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCccccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ   34 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~   34 (314)
                      |.|.+|..+++.|++.||+|++.+|++++...
T Consensus        12 GLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~   43 (297)
T 4gbj_A           12 GLGNLGTPIAEILLEAGYELVVWNRTASKAEP   43 (297)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEC-------CT
T ss_pred             ecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence            56999999999999999999999999887543

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=95.89  E-value=0.0031  Score=54.04  Aligned_cols=64  Identities=13%  Similarity=-0.060  Sum_probs=52.9

Q ss_pred             ccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHh-hhcCCccEEEEcCCC
Q 021331            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDINGR   82 (314)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~-~~~~~~d~vi~~a~~   82 (314)
                      .|.+|..+++.|.++|+ |++++++++...  +.          ..++.++.+|.+|++.+.++ ++  ++|.++-+.+.
T Consensus       123 ~G~~g~~l~~~L~~~g~-v~vid~~~~~~~--~~----------~~~~~~i~gd~~~~~~L~~a~i~--~a~~vi~~~~~  187 (336)
T 1lnq_A          123 WSESTLECLRELRGSEV-FVLAEDENVRKK--VL----------RSGANFVHGDPTRVSDLEKANVR--GARAVIVDLES  187 (336)
T ss_dssp             CCHHHHHHHTTGGGSCE-EEEESCGGGHHH--HH----------HTTCEEEESCTTSHHHHHHTCST--TEEEEEECCSS
T ss_pred             CcHHHHHHHHHHHhCCc-EEEEeCChhhhh--HH----------hCCcEEEEeCCCCHHHHHhcChh--hccEEEEcCCc
Confidence            49999999999999999 999988876633  21          25789999999999999887 66  89999987654

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=95.72  E-value=0.0038  Score=54.06  Aligned_cols=90  Identities=11%  Similarity=0.174  Sum_probs=59.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      +|+ |.+|..+++.|...|.+|++++|++++....         .+. ...+   ..+..+.+.+.+.+.  ++|+||++
T Consensus       173 iGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~---------~~~~~~~~---~~~~~~~~~~~~~~~--~~DvVI~~  237 (361)
T 1pjc_A          173 LGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYL---------ETLFGSRV---ELLYSNSAEIETAVA--EADLLIGA  237 (361)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHHGGGS---EEEECCHHHHHHHHH--TCSEEEEC
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH---------HHhhCcee---EeeeCCHHHHHHHHc--CCCEEEEC
Confidence            366 9999999999999999999999987653211         000 0111   112234556777777  89999999


Q ss_pred             CCCCcc-----cHHHHHHhCCCCCcEEEEee
Q 021331           80 NGREAD-----EVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        80 a~~~~~-----~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      .+....     -....++.++...+++-++.
T Consensus       238 ~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~  268 (361)
T 1pjc_A          238 VLVPGRRAPILVPASLVEQMRTGSVIVDVAV  268 (361)
T ss_dssp             CCCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred             CCcCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence            875321     14556677775556676554

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=95.71  E-value=0.0093  Score=51.89  Aligned_cols=92  Identities=15%  Similarity=0.104  Sum_probs=56.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      +||+|.+|..+++.+...|.+|+++++ .++.. .+        .+  -+... ..|..+.+..+++.+..++|+||+++
T Consensus       190 ~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~-~~--------~~--lGa~~-v~~~~~~~~~~~~~~~~g~D~vid~~  256 (375)
T 2vn8_A          190 LGASGGVGTFAIQVMKAWDAHVTAVCS-QDASE-LV--------RK--LGADD-VIDYKSGSVEEQLKSLKPFDFILDNV  256 (375)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHH-HH--------HH--TTCSE-EEETTSSCHHHHHHTSCCBSEEEESS
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHH-HH--------HH--cCCCE-EEECCchHHHHHHhhcCCCCEEEECC
Confidence            488999999999999999999998874 33311 11        11  12222 23555544333333323799999999


Q ss_pred             CCCcccHHHHHHhCCCCCcEEEEee
Q 021331           81 GREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      |.........++.++...+++.++.
T Consensus       257 g~~~~~~~~~~~~l~~~G~iv~~g~  281 (375)
T 2vn8_A          257 GGSTETWAPDFLKKWSGATYVTLVT  281 (375)
T ss_dssp             CTTHHHHGGGGBCSSSCCEEEESCC
T ss_pred             CChhhhhHHHHHhhcCCcEEEEeCC
Confidence            8653322334444555567886654

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=95.70  E-value=0.0077  Score=51.34  Aligned_cols=90  Identities=17%  Similarity=0.146  Sum_probs=55.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh--hhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY--DFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~--~~l~~~~~~~~~d~vi~   78 (314)
                      +||+|.+|..+++.+...|.+|++++++.++....         .+  .+...+ .|..+.  +.+.+ +...++|+||+
T Consensus       156 ~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~---------~~--lGa~~~-i~~~~~~~~~~~~-~~~~~~d~vid  222 (328)
T 1xa0_A          156 TGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL---------RV--LGAKEV-LAREDVMAERIRP-LDKQRWAAAVD  222 (328)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH---------HH--TTCSEE-EECC----------CCSCCEEEEEE
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---------HH--cCCcEE-EecCCcHHHHHHH-hcCCcccEEEE
Confidence            58899999999999999999999999886553211         11  122221 344433  11222 22236999999


Q ss_pred             cCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           79 INGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ++|..  .....++.++...+++.++.
T Consensus       223 ~~g~~--~~~~~~~~l~~~G~~v~~G~  247 (328)
T 1xa0_A          223 PVGGR--TLATVLSRMRYGGAVAVSGL  247 (328)
T ss_dssp             CSTTT--THHHHHHTEEEEEEEEECSC
T ss_pred             CCcHH--HHHHHHHhhccCCEEEEEee
Confidence            99863  45566666664457776553

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=95.68  E-value=0.012  Score=51.07  Aligned_cols=90  Identities=13%  Similarity=0.139  Sum_probs=61.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      +|+ |.+|..+++.+...|.+|++++++.++......        .  .+... ..|..+.+.+.++..  ++|+||+++
T Consensus       194 ~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~--------~--lGa~~-v~~~~~~~~~~~~~~--~~D~vid~~  259 (366)
T 1yqd_A          194 VGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALK--------N--FGADS-FLVSRDQEQMQAAAG--TLDGIIDTV  259 (366)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHH--------T--SCCSE-EEETTCHHHHHHTTT--CEEEEEECC
T ss_pred             ECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------h--cCCce-EEeccCHHHHHHhhC--CCCEEEECC
Confidence            364 999999999999999999999988765321110        0  12221 246767666776665  899999999


Q ss_pred             CCCcccHHHHHHhCCCCCcEEEEee
Q 021331           81 GREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      |... .....++.++...+++.+++
T Consensus       260 g~~~-~~~~~~~~l~~~G~iv~~g~  283 (366)
T 1yqd_A          260 SAVH-PLLPLFGLLKSHGKLILVGA  283 (366)
T ss_dssp             SSCC-CSHHHHHHEEEEEEEEECCC
T ss_pred             CcHH-HHHHHHHHHhcCCEEEEEcc
Confidence            8542 23456677774457887665

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=95.68  E-value=0.013  Score=49.25  Aligned_cols=31  Identities=19%  Similarity=0.360  Sum_probs=27.8

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA   33 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   33 (314)
                      |.|.+|..+++.|++.||+|++.+|++++..
T Consensus        10 GlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~   40 (300)
T 3obb_A           10 GLGHMGAPMATNLLKAGYLLNVFDLVQSAVD   40 (300)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSSHHHHH
T ss_pred             eehHHHHHHHHHHHhCCCeEEEEcCCHHHHH
Confidence            5699999999999999999999999987643

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.59  E-value=0.016  Score=47.10  Aligned_cols=28  Identities=11%  Similarity=0.184  Sum_probs=23.5

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRG   28 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~   28 (314)
                      .|++|.+|+.+++.+.+. ++++++....
T Consensus         6 ~Ga~G~mG~~i~~~~~~~~~~elva~~d~   34 (245)
T 1p9l_A            6 LGAKGKVGTTMVRAVAAADDLTLSAELDA   34 (245)
T ss_dssp             ETTTSHHHHHHHHHHHHCTTCEEEEEECT
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEcc
Confidence            488999999999999876 8998876643

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=95.58  E-value=0.041  Score=46.23  Aligned_cols=28  Identities=14%  Similarity=0.216  Sum_probs=25.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~   30 (314)
                      +||.+|.+++++++.+|++|+.+.+..+
T Consensus        63 SSGkmG~aiAe~~~~~Ga~V~lv~g~~s   90 (313)
T 1p9o_A           63 SSGRRGATSAEAFLAAGYGVLFLYRARS   90 (313)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence            3599999999999999999999998654

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=95.54  E-value=0.05  Score=45.95  Aligned_cols=84  Identities=14%  Similarity=0.193  Sum_probs=57.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|++|++.+|++...                .++....    ...++++++.  ++|+|+.+...
T Consensus       146 G~G~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~~~~~~----~~~~l~ell~--~aDiV~l~~Pl  203 (315)
T 3pp8_A          146 GAGVLGAKVAESLQAWGFPLRCWSRSRKSW----------------PGVESYV----GREELRAFLN--QTRVLINLLPN  203 (315)
T ss_dssp             CCSHHHHHHHHHHHTTTCCEEEEESSCCCC----------------TTCEEEE----SHHHHHHHHH--TCSEEEECCCC
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEEcCCchhh----------------hhhhhhc----ccCCHHHHHh--hCCEEEEecCC
Confidence            569999999999999999999999887542                1221111    2367889998  99999977654


Q ss_pred             Ccc--c--HHHHHHhCCCCCcEEEEeecee
Q 021331           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (314)
Q Consensus        83 ~~~--~--~~~~~~~~~~~~~~i~~Ss~~v  108 (314)
                      +..  +  ....+..|+...-+|.+|...+
T Consensus       204 t~~t~~li~~~~l~~mk~gailIN~aRG~~  233 (315)
T 3pp8_A          204 TAQTVGIINSELLDQLPDGAYVLNLARGVH  233 (315)
T ss_dssp             CGGGTTCBSHHHHTTSCTTEEEEECSCGGG
T ss_pred             chhhhhhccHHHHhhCCCCCEEEECCCChh
Confidence            321  1  2345566665556776665443

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=95.45  E-value=0.023  Score=50.63  Aligned_cols=93  Identities=13%  Similarity=0.172  Sum_probs=57.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEe--cCCC----------------hh
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG--DRKD----------------YD   62 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--D~~d----------------~~   62 (314)
                      +||+|.+|..+++.+...|.+|++++++.++....         .++.....+...  |+.+                .+
T Consensus       227 ~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~---------~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (447)
T 4a0s_A          227 WGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV---------RALGCDLVINRAELGITDDIADDPRRVVETGRKLAK  297 (447)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH---------HHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---------HhcCCCEEEecccccccccccccccccchhhhHHHH
Confidence            58999999999999999999999999876553211         111111111111  1110                12


Q ss_pred             hHHHhhhcCCccEEEEcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           63 FVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        63 ~l~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      .+.+.. ..++|+||+++|.  ......++.++...+++.+++
T Consensus       298 ~v~~~~-g~g~Dvvid~~G~--~~~~~~~~~l~~~G~iv~~G~  337 (447)
T 4a0s_A          298 LVVEKA-GREPDIVFEHTGR--VTFGLSVIVARRGGTVVTCGS  337 (447)
T ss_dssp             HHHHHH-SSCCSEEEECSCH--HHHHHHHHHSCTTCEEEESCC
T ss_pred             HHHHHh-CCCceEEEECCCc--hHHHHHHHHHhcCCEEEEEec
Confidence            333333 3479999999985  344566677776668887765

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.43  E-value=0.0042  Score=55.61  Aligned_cols=68  Identities=16%  Similarity=0.256  Sum_probs=52.4

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |.|-+|..|++.|.++||+|++++++++.......          .-++..+.+|.++++.|+++= -.++|.+|-+.+
T Consensus        10 G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~----------~~~~~~i~Gd~~~~~~L~~Ag-i~~ad~~ia~t~   77 (461)
T 4g65_A           10 GAGQVGGTLAENLVGENNDITIVDKDGDRLRELQD----------KYDLRVVNGHASHPDVLHEAG-AQDADMLVAVTN   77 (461)
T ss_dssp             CCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHH----------HSSCEEEESCTTCHHHHHHHT-TTTCSEEEECCS
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----------hcCcEEEEEcCCCHHHHHhcC-CCcCCEEEEEcC
Confidence            56999999999999999999999998766421110          136788999999999999873 237998885443

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=95.38  E-value=0.0013  Score=56.23  Aligned_cols=72  Identities=15%  Similarity=0.106  Sum_probs=43.0

Q ss_pred             CCcccccHHHHHHHHHHCCC--e-----EEEEEcCCc--ccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGH--Q-----VTLFTRGKA--PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~-----V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~   71 (314)
                      |||+|++|++++..|+..+.  +     +++++++..  ......     .++.+.  ...+. .++.......+.++  
T Consensus         9 ~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a-----~DL~~~--~~~~~-~~~~~~~~~~~~~~--   78 (333)
T 5mdh_A            9 TGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVL-----MELQDC--ALPLL-KDVIATDKEEIAFK--   78 (333)
T ss_dssp             SSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHH-----HHHHHT--CCTTE-EEEEEESCHHHHTT--
T ss_pred             ECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhH-----hhhHhh--hhccc-CCEEEcCCcHHHhC--
Confidence            69999999999999988764  4     888888642  110000     011110  00111 12222233556677  


Q ss_pred             CccEEEEcCCC
Q 021331           72 GFDVVYDINGR   82 (314)
Q Consensus        72 ~~d~vi~~a~~   82 (314)
                      ++|+||++||.
T Consensus        79 daDvVvitAg~   89 (333)
T 5mdh_A           79 DLDVAILVGSM   89 (333)
T ss_dssp             TCSEEEECCSC
T ss_pred             CCCEEEEeCCC
Confidence            99999999986

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=95.11  E-value=0.013  Score=52.02  Aligned_cols=31  Identities=23%  Similarity=0.432  Sum_probs=28.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA   33 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   33 (314)
                      |+|++|..++..|.+.||+|++.+|++++..
T Consensus        15 GlG~vG~~~A~~La~~G~~V~~~D~~~~kv~   45 (446)
T 4a7p_A           15 GTGYVGLVSGACFSDFGHEVVCVDKDARKIE   45 (446)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCSTTHH
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            6799999999999999999999999987643

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=95.07  E-value=0.015  Score=49.98  Aligned_cols=91  Identities=15%  Similarity=0.224  Sum_probs=52.0

Q ss_pred             CCcccccHHHHHHHHHHCC-----C-eEEEEEcCCcc---cccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC
Q 021331            1 MGGTRFIGVFLSRLLVKEG-----H-QVTLFTRGKAP---IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-----~-~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~   71 (314)
                      .||||++|+.+++.|.+++     + +|+.+.+..+.   .....+.     +.. ...+.+  .|. ++    +.+.  
T Consensus        15 vGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~-----l~~-~~~~~~--~~~-~~----~~~~--   79 (352)
T 2nqt_A           15 AGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPH-----LTP-LAHRVV--EPT-EA----AVLG--   79 (352)
T ss_dssp             ETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTT-----CGG-GTTCBC--EEC-CH----HHHT--
T ss_pred             ECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhccc-----ccc-cceeee--ccC-CH----HHhc--
Confidence            4999999999999999887     3 77777643321   1111110     000 011111  122 22    2355  


Q ss_pred             CccEEEEcCCCCcccHHHHHHhCCCCCcEEEEeecee
Q 021331           72 GFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGV  108 (314)
Q Consensus        72 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~~v  108 (314)
                      ++|+||.+.+...  ...++..+....++|-+|+..-
T Consensus        80 ~~DvVf~alg~~~--s~~~~~~~~~G~~vIDlSa~~R  114 (352)
T 2nqt_A           80 GHDAVFLALPHGH--SAVLAQQLSPETLIIDCGADFR  114 (352)
T ss_dssp             TCSEEEECCTTSC--CHHHHHHSCTTSEEEECSSTTT
T ss_pred             CCCEEEECCCCcc--hHHHHHHHhCCCEEEEECCCcc
Confidence            8999999987653  3344444442357888888653

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=95.00  E-value=0.08  Score=44.89  Aligned_cols=84  Identities=12%  Similarity=0.103  Sum_probs=57.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|++|++.+|+..... ...            .  .+     ...++.+++.  ++|+|+.+...
T Consensus       144 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-~~~------------~--~~-----~~~~l~ell~--~aDvV~l~lPl  201 (324)
T 3evt_A          144 GTGQIGQSLAAKASALGMHVIGVNTTGHPAD-HFH------------E--TV-----AFTATADALA--TANFIVNALPL  201 (324)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSCCCCT-TCS------------E--EE-----EGGGCHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHhCCCEEEEECCCcchhH-hHh------------h--cc-----ccCCHHHHHh--hCCEEEEcCCC
Confidence            5699999999999999999999998865521 110            1  11     1345677887  89999977654


Q ss_pred             Ccc----cHHHHHHhCCCCCcEEEEeecee
Q 021331           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (314)
Q Consensus        83 ~~~----~~~~~~~~~~~~~~~i~~Ss~~v  108 (314)
                      +..    -....+..++....+|.+|...+
T Consensus       202 t~~t~~li~~~~l~~mk~gailIN~aRG~~  231 (324)
T 3evt_A          202 TPTTHHLFSTELFQQTKQQPMLINIGRGPA  231 (324)
T ss_dssp             CGGGTTCBSHHHHHTCCSCCEEEECSCGGG
T ss_pred             chHHHHhcCHHHHhcCCCCCEEEEcCCChh
Confidence            321    12456777776667777776443

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=94.98  E-value=0.035  Score=46.27  Aligned_cols=81  Identities=16%  Similarity=0.019  Sum_probs=56.8

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|++|++.+|+.....                .+       ...+++++++.  ++|+|+.+...
T Consensus       129 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~----------------~~-------~~~~~l~ell~--~aDiV~l~~P~  183 (290)
T 3gvx_A          129 GYGGIGRRVAHLAKAFGMRVIAYTRSSVDQN----------------VD-------VISESPADLFR--QSDFVLIAIPL  183 (290)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSSCCCTT----------------CS-------EECSSHHHHHH--HCSEEEECCCC
T ss_pred             ccCchhHHHHHHHHhhCcEEEEEeccccccc----------------cc-------cccCChHHHhh--ccCeEEEEeec
Confidence            5699999999999999999999998875521                11       11235778887  89999987664


Q ss_pred             Cc--c--cHHHHHHhCCCCCcEEEEeecee
Q 021331           83 EA--D--EVEPILDALPNLEQFIYCSSAGV  108 (314)
Q Consensus        83 ~~--~--~~~~~~~~~~~~~~~i~~Ss~~v  108 (314)
                      +.  .  -....+..|+....+|.+|+..+
T Consensus       184 t~~t~~li~~~~l~~mk~gailIN~aRG~~  213 (290)
T 3gvx_A          184 TDKTRGMVNSRLLANARKNLTIVNVARADV  213 (290)
T ss_dssp             CTTTTTCBSHHHHTTCCTTCEEEECSCGGG
T ss_pred             cccchhhhhHHHHhhhhcCceEEEeehhcc
Confidence            22  1  12456677776667777776443

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=94.97  E-value=0.022  Score=48.09  Aligned_cols=73  Identities=11%  Similarity=0.120  Sum_probs=49.4

Q ss_pred             CCcccccHHHHHHHHHHCCC-eEEEEEcCC---cccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGK---APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~v   76 (314)
                      +|+ |.+|++++..|.+.|. +|+++.|+.   ++... +.    .++... .++.+...++.+.+.+.+.+.  ++|+|
T Consensus       160 lGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~-la----~~~~~~-~~~~~~~~~~~~~~~l~~~l~--~aDiI  230 (315)
T 3tnl_A          160 CGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEK-TV----EKINSK-TDCKAQLFDIEDHEQLRKEIA--ESVIF  230 (315)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHH-HH----HHHHHH-SSCEEEEEETTCHHHHHHHHH--TCSEE
T ss_pred             ECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHH-HH----HHhhhh-cCCceEEeccchHHHHHhhhc--CCCEE
Confidence            365 8999999999999997 899999983   32111 10    011100 123444567777777888888  89999


Q ss_pred             EEcCCC
Q 021331           77 YDINGR   82 (314)
Q Consensus        77 i~~a~~   82 (314)
                      |++...
T Consensus       231 INaTp~  236 (315)
T 3tnl_A          231 TNATGV  236 (315)
T ss_dssp             EECSST
T ss_pred             EECccC
Confidence            998654

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=94.89  E-value=0.0091  Score=52.00  Aligned_cols=90  Identities=12%  Similarity=0.099  Sum_probs=60.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh-ccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      +|+ |.+|..+++.+...|.+|++++|++......         .+ +...+   ..+..+.+.+.+.+.  ++|+||.+
T Consensus       174 iG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~---------~~~~g~~~---~~~~~~~~~l~~~l~--~aDvVi~~  238 (377)
T 2vhw_A          174 IGA-GTAGYNAARIANGMGATVTVLDINIDKLRQL---------DAEFCGRI---HTRYSSAYELEGAVK--RADLVIGA  238 (377)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHTTTSS---EEEECCHHHHHHHHH--HCSEEEEC
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH---------HHhcCCee---EeccCCHHHHHHHHc--CCCEEEEC
Confidence            365 9999999999999999999999987652210         00 01111   223445667888887  89999998


Q ss_pred             CCCCcc-----cHHHHHHhCCCCCcEEEEee
Q 021331           80 NGREAD-----EVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        80 a~~~~~-----~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ++....     -....++.++....+|.+|.
T Consensus       239 ~~~p~~~t~~li~~~~l~~mk~g~~iV~va~  269 (377)
T 2vhw_A          239 VLVPGAKAPKLVSNSLVAHMKPGAVLVDIAI  269 (377)
T ss_dssp             CCCTTSCCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred             CCcCCCCCcceecHHHHhcCCCCcEEEEEec
Confidence            764321     14567777776567887774

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=94.77  E-value=0.025  Score=44.97  Aligned_cols=59  Identities=24%  Similarity=0.256  Sum_probs=42.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |+|.+|..+++.|.+.|++|++.+|+.+.......           .++...        ++.+++.  ++|+||.+...
T Consensus        35 G~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~-----------~g~~~~--------~~~~~~~--~~DvVi~av~~   93 (215)
T 2vns_A           35 GSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFP-----------SAAQVT--------FQEEAVS--SPEVIFVAVFR   93 (215)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSB-----------TTSEEE--------EHHHHTT--SCSEEEECSCG
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cCCcee--------cHHHHHh--CCCEEEECCCh
Confidence            37999999999999999999999998665321111           233321        3456666  89999988764

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=94.74  E-value=0.017  Score=49.52  Aligned_cols=89  Identities=11%  Similarity=0.056  Sum_probs=57.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChh---hHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~l~~~~~~~~~d~vi   77 (314)
                      +|+ |.+|..+++.+...|.+|+++++++++....         .+  .+... ..|..+.+   .+.++..  ++|+||
T Consensus       171 ~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~---------~~--lGa~~-~~d~~~~~~~~~~~~~~~--~~d~vi  235 (339)
T 1rjw_A          171 YGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA---------KE--LGADL-VVNPLKEDAAKFMKEKVG--GVHAAV  235 (339)
T ss_dssp             ECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH---------HH--TTCSE-EECTTTSCHHHHHHHHHS--SEEEEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---------HH--CCCCE-EecCCCccHHHHHHHHhC--CCCEEE
Confidence            477 7799999999999999999999886653211         01  12222 24665433   2333333  799999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +++|. .......++.++...+++.++.
T Consensus       236 d~~g~-~~~~~~~~~~l~~~G~~v~~g~  262 (339)
T 1rjw_A          236 VTAVS-KPAFQSAYNSIRRGGACVLVGL  262 (339)
T ss_dssp             ESSCC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred             ECCCC-HHHHHHHHHHhhcCCEEEEecc
Confidence            99884 2334556666664457776654

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=94.70  E-value=0.011  Score=52.55  Aligned_cols=30  Identities=23%  Similarity=0.387  Sum_probs=26.8

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~   32 (314)
                      |+|++|..++..|.+.|++|++++|+++..
T Consensus         7 G~G~vG~~~A~~la~~G~~V~~~d~~~~~~   36 (436)
T 1mv8_A            7 GLGYVGAVCAGCLSARGHEVIGVDVSSTKI   36 (436)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            479999999999999999999999987653

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=94.69  E-value=0.027  Score=48.32  Aligned_cols=88  Identities=18%  Similarity=0.314  Sum_probs=55.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh---hhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~l~~~~~~~~~d~vi   77 (314)
                      +||+|.+|..+++.+...|.+|+++ ++.++.. .        ..+  .+...  .| .+.   +.+.+.....++|+||
T Consensus       157 ~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~-~--------~~~--lGa~~--i~-~~~~~~~~~~~~~~~~g~D~vi  221 (343)
T 3gaz_A          157 QGGGGGVGHVAIQIALARGARVFAT-ARGSDLE-Y--------VRD--LGATP--ID-ASREPEDYAAEHTAGQGFDLVY  221 (343)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHH-H--------HHH--HTSEE--EE-TTSCHHHHHHHHHTTSCEEEEE
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHH-H--------HHH--cCCCE--ec-cCCCHHHHHHHHhcCCCceEEE
Confidence            4889999999999999999999988 5544421 1        111  23333  34 332   2333333334799999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +++|.  ......++.++...+++.++.
T Consensus       222 d~~g~--~~~~~~~~~l~~~G~iv~~g~  247 (343)
T 3gaz_A          222 DTLGG--PVLDASFSAVKRFGHVVSCLG  247 (343)
T ss_dssp             ESSCT--HHHHHHHHHEEEEEEEEESCC
T ss_pred             ECCCc--HHHHHHHHHHhcCCeEEEEcc
Confidence            99984  344556666664457776543

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=94.62  E-value=0.028  Score=46.85  Aligned_cols=59  Identities=17%  Similarity=0.220  Sum_probs=41.7

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |.|.+|..+++.|.+.|++|++.+|+++.......           .++..       ..++.+++.  ++|+||-+..
T Consensus         8 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g~~~-------~~~~~~~~~--~aDvvi~~vp   66 (287)
T 3pef_A            8 GLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAA-----------LGAER-------AATPCEVVE--SCPVTFAMLA   66 (287)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-----------TTCEE-------CSSHHHHHH--HCSEEEECCS
T ss_pred             eecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-----------CCCee-------cCCHHHHHh--cCCEEEEEcC
Confidence            46999999999999999999999998776331111           12211       134556666  7899987765

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=94.57  E-value=0.0074  Score=51.33  Aligned_cols=90  Identities=16%  Similarity=0.169  Sum_probs=56.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      +||+|.+|...++.+...|.+|+++++++++...         ..++  +...+ .|..+.+.+. .+...++|++|++.
T Consensus       153 ~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~---------~~~l--Ga~~v-i~~~~~~~~~-~~~~~~~d~v~d~~  219 (324)
T 3nx4_A          153 TGASGGVGSTAVALLHKLGYQVAAVSGRESTHGY---------LKSL--GANRI-LSRDEFAESR-PLEKQLWAGAIDTV  219 (324)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH---------HHHH--TCSEE-EEGGGSSCCC-SSCCCCEEEEEESS
T ss_pred             ECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHhc--CCCEE-EecCCHHHHH-hhcCCCccEEEECC
Confidence            5889999999999999999999999988765321         1111  22211 2343332222 22223799999998


Q ss_pred             CCCcccHHHHHHhCCCCCcEEEEee
Q 021331           81 GREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      |..  .....++.++...+++.++.
T Consensus       220 g~~--~~~~~~~~l~~~G~iv~~G~  242 (324)
T 3nx4_A          220 GDK--VLAKVLAQMNYGGCVAACGL  242 (324)
T ss_dssp             CHH--HHHHHHHTEEEEEEEEECCC
T ss_pred             CcH--HHHHHHHHHhcCCEEEEEec
Confidence            742  45556666665557776654

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=94.53  E-value=0.022  Score=50.93  Aligned_cols=91  Identities=12%  Similarity=0.179  Sum_probs=57.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh-------------------
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-------------------   61 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-------------------   61 (314)
                      +||+|.+|...++.+...|.+|+++++++++... +        .+  .+...+ .|..+.                   
T Consensus       235 ~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~-~--------~~--lGa~~v-i~~~~~d~~~~~~~~~~~~~~~~~~  302 (456)
T 3krt_A          235 WGASGGLGSYATQFALAGGANPICVVSSPQKAEI-C--------RA--MGAEAI-IDRNAEGYRFWKDENTQDPKEWKRF  302 (456)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-H--------HH--HTCCEE-EETTTTTCCSEEETTEECHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHH-H--------Hh--hCCcEE-EecCcCcccccccccccchHHHHHH
Confidence            5889999999999999999999999986654321 1        11  122211 233221                   


Q ss_pred             -hhHHHhhhcCCccEEEEcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           62 -DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        62 -~~l~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                       +.+.++....++|+||+++|.  ......++.++...+++.+++
T Consensus       303 ~~~i~~~t~g~g~Dvvid~~G~--~~~~~~~~~l~~~G~iv~~G~  345 (456)
T 3krt_A          303 GKRIRELTGGEDIDIVFEHPGR--ETFGASVFVTRKGGTITTCAS  345 (456)
T ss_dssp             HHHHHHHHTSCCEEEEEECSCH--HHHHHHHHHEEEEEEEEESCC
T ss_pred             HHHHHHHhCCCCCcEEEEcCCc--hhHHHHHHHhhCCcEEEEEec
Confidence             334444433479999999985  445556666664457776554

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=94.53  E-value=0.031  Score=47.15  Aligned_cols=60  Identities=15%  Similarity=0.177  Sum_probs=42.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|..+++.|.+.|++|++.+|+++.......           .++..       ..++.+++.  ++|+||-+...
T Consensus        28 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~-----------~g~~~-------~~~~~~~~~--~aDvvi~~vp~   87 (310)
T 3doj_A           28 GLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVE-----------HGASV-------CESPAEVIK--KCKYTIAMLSD   87 (310)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-----------TTCEE-------CSSHHHHHH--HCSEEEECCSS
T ss_pred             CccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----------CCCeE-------cCCHHHHHH--hCCEEEEEcCC
Confidence            57999999999999999999999998766321111           12211       233556666  78999987653

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=94.49  E-value=0.056  Score=45.18  Aligned_cols=84  Identities=18%  Similarity=0.195  Sum_probs=55.6

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|..+++.|...|.+|++.+|+..+... .        .  ..++..+     +.+++.+++.  ++|+|+.+...
T Consensus       162 G~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~-~--------~--~~g~~~~-----~~~~l~~~l~--~aDvVi~~~p~  223 (293)
T 3d4o_A          162 GLGRVGMSVARKFAALGAKVKVGARESDLLAR-I--------A--EMGMEPF-----HISKAAQELR--DVDVCINTIPA  223 (293)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-H--------H--HTTSEEE-----EGGGHHHHTT--TCSEEEECCSS
T ss_pred             eeCHHHHHHHHHHHhCCCEEEEEECCHHHHHH-H--------H--HCCCeec-----ChhhHHHHhc--CCCEEEECCCh
Confidence            46999999999999999999999998654211 0        0  0123322     2345777787  89999998765


Q ss_pred             CcccHHHHHHhCCCCCcEEEEee
Q 021331           83 EADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      .... ...++.++....+|.++.
T Consensus       224 ~~i~-~~~l~~mk~~~~lin~ar  245 (293)
T 3d4o_A          224 LVVT-ANVLAEMPSHTFVIDLAS  245 (293)
T ss_dssp             CCBC-HHHHHHSCTTCEEEECSS
T ss_pred             HHhC-HHHHHhcCCCCEEEEecC
Confidence            4332 345667775556665543

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=94.49  E-value=0.059  Score=43.87  Aligned_cols=100  Identities=12%  Similarity=0.118  Sum_probs=57.1

Q ss_pred             cccccHHHHHHHHHHCCC-eEEEEEcCCcc---cccCCCCC------Cc-----hhhhhccCc--eEEEEecCCChhhHH
Q 021331            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAP---IAQQLPGE------SD-----QEFAEFSSK--ILHLKGDRKDYDFVK   65 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~~~~~~~------~~-----~~~~~~~~~--~~~~~~D~~d~~~l~   65 (314)
                      |.|.+|..+++.|...|. +|++++++.-.   ..+++...      ..     +++....+.  +..+..++. .+.+.
T Consensus        38 G~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~-~~~~~  116 (249)
T 1jw9_B           38 GLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLD-DAELA  116 (249)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCC-HHHHH
T ss_pred             eeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccCC-HhHHH
Confidence            469999999999999995 89999987622   11111100      00     111111123  333444453 45567


Q ss_pred             HhhhcCCccEEEEcCCCCcccHHHHHHhCC-CCCcEEEEeec
Q 021331           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSA  106 (314)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss~  106 (314)
                      +.+.  ++|+||.+... ...-..+.+.|. ....+|..+..
T Consensus       117 ~~~~--~~DvVi~~~d~-~~~~~~l~~~~~~~~~p~i~~~~~  155 (249)
T 1jw9_B          117 ALIA--EHDLVLDCTDN-VAVRNQLNAGCFAAKVPLVSGAAI  155 (249)
T ss_dssp             HHHH--TSSEEEECCSS-HHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred             HHHh--CCCEEEEeCCC-HHHHHHHHHHHHHcCCCEEEeeec
Confidence            7788  89999998753 333333444455 33466665443

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=94.43  E-value=0.066  Score=45.37  Aligned_cols=84  Identities=13%  Similarity=0.086  Sum_probs=55.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|++|++.+|++....                .+.-.    ....++++++.  ++|+|+.+...
T Consensus       147 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~----------------~~~~~----~~~~~l~ell~--~aDvV~l~lPl  204 (324)
T 3hg7_A          147 GTGSIGQHIAHTGKHFGMKVLGVSRSGRERA----------------GFDQV----YQLPALNKMLA--QADVIVSVLPA  204 (324)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCCCT----------------TCSEE----ECGGGHHHHHH--TCSEEEECCCC
T ss_pred             EECHHHHHHHHHHHhCCCEEEEEcCChHHhh----------------hhhcc----cccCCHHHHHh--hCCEEEEeCCC
Confidence            5799999999999999999999998864321                11000    12456888898  99999987654


Q ss_pred             Ccc--c--HHHHHHhCCCCCcEEEEeecee
Q 021331           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (314)
Q Consensus        83 ~~~--~--~~~~~~~~~~~~~~i~~Ss~~v  108 (314)
                      +..  +  ....+..|+...-+|.+|...+
T Consensus       205 t~~T~~li~~~~l~~mk~gailIN~aRG~~  234 (324)
T 3hg7_A          205 TRETHHLFTASRFEHCKPGAILFNVGRGNA  234 (324)
T ss_dssp             CSSSTTSBCTTTTTCSCTTCEEEECSCGGG
T ss_pred             CHHHHHHhHHHHHhcCCCCcEEEECCCchh
Confidence            321  1  1233444555556776665443

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=94.36  E-value=0.094  Score=44.21  Aligned_cols=77  Identities=17%  Similarity=0.119  Sum_probs=53.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|++|++.+|+....                .      .+   ..++.+++.  ++|+|+.+...
T Consensus       151 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~----------------~------~~---~~~l~ell~--~aDvV~l~~p~  203 (311)
T 2cuk_A          151 GMGRIGQAVAKRALAFGMRVVYHARTPKPL----------------P------YP---FLSLEELLK--EADVVSLHTPL  203 (311)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSS----------------S------SC---BCCHHHHHH--HCSEEEECCCC
T ss_pred             EECHHHHHHHHHHHHCCCEEEEECCCCccc----------------c------cc---cCCHHHHHh--hCCEEEEeCCC
Confidence            569999999999999999999999876551                1      12   234667777  89999987654


Q ss_pred             Cc--cc--HHHHHHhCCCCCcEEEEeec
Q 021331           83 EA--DE--VEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        83 ~~--~~--~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      ..  .+  ....+..++....+|.+|+.
T Consensus       204 ~~~t~~li~~~~l~~mk~ga~lin~srg  231 (311)
T 2cuk_A          204 TPETHRLLNRERLFAMKRGAILLNTARG  231 (311)
T ss_dssp             CTTTTTCBCHHHHTTSCTTCEEEECSCG
T ss_pred             ChHHHhhcCHHHHhhCCCCcEEEECCCC
Confidence            32  11  12455666655567777763

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=94.33  E-value=0.043  Score=47.40  Aligned_cols=89  Identities=16%  Similarity=0.159  Sum_probs=57.7

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh---hhHHHhhhcCCccEEEE
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~l~~~~~~~~~d~vi~   78 (314)
                      | +|.+|...++.+...|.+|+++++++++... .        .+  -+...+ .|..+.   +.+.++....++|+||+
T Consensus       197 G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~-~--------~~--lGa~~v-i~~~~~~~~~~v~~~~~g~g~D~vid  263 (363)
T 3uog_A          197 G-TGGVALFGLQIAKATGAEVIVTSSSREKLDR-A--------FA--LGADHG-INRLEEDWVERVYALTGDRGADHILE  263 (363)
T ss_dssp             S-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHH-H--------HH--HTCSEE-EETTTSCHHHHHHHHHTTCCEEEEEE
T ss_pred             C-CCHHHHHHHHHHHHcCCEEEEEecCchhHHH-H--------HH--cCCCEE-EcCCcccHHHHHHHHhCCCCceEEEE
Confidence            6 8999999999999999999999988665321 1        11  122222 232212   23444444347999999


Q ss_pred             cCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           79 INGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ++|  .......++.++...+++.++.
T Consensus       264 ~~g--~~~~~~~~~~l~~~G~iv~~G~  288 (363)
T 3uog_A          264 IAG--GAGLGQSLKAVAPDGRISVIGV  288 (363)
T ss_dssp             ETT--SSCHHHHHHHEEEEEEEEEECC
T ss_pred             CCC--hHHHHHHHHHhhcCCEEEEEec
Confidence            998  3445667777775568887654

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=94.33  E-value=0.022  Score=49.28  Aligned_cols=87  Identities=21%  Similarity=0.281  Sum_probs=55.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCC---cccccCCCCCCchhhhhccCceEEEEecCCC--hhhHHHhhhcCCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK---APIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~l~~~~~~~~~d~   75 (314)
                      +|| |.+|..+++.+...|.+|++++++.   ++.. ..        .  ..+...+  | .+  .+.+.+ .. .++|+
T Consensus       187 ~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~--------~--~~ga~~v--~-~~~~~~~~~~-~~-~~~d~  249 (366)
T 2cdc_A          187 VGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQT-VI--------E--ETKTNYY--N-SSNGYDKLKD-SV-GKFDV  249 (366)
T ss_dssp             ESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHH-HH--------H--HHTCEEE--E-CTTCSHHHHH-HH-CCEEE
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHH-HH--------H--HhCCcee--c-hHHHHHHHHH-hC-CCCCE
Confidence            488 9999999999999999999999987   4421 11        0  1234444  4 43  223333 22 37999


Q ss_pred             EEEcCCCCcccH-HHHHHhCCCCCcEEEEee
Q 021331           76 VYDINGREADEV-EPILDALPNLEQFIYCSS  105 (314)
Q Consensus        76 vi~~a~~~~~~~-~~~~~~~~~~~~~i~~Ss  105 (314)
                      ||+++|... .. ...++.++...+++.++.
T Consensus       250 vid~~g~~~-~~~~~~~~~l~~~G~iv~~g~  279 (366)
T 2cdc_A          250 IIDATGADV-NILGNVIPLLGRNGVLGLFGF  279 (366)
T ss_dssp             EEECCCCCT-HHHHHHGGGEEEEEEEEECSC
T ss_pred             EEECCCChH-HHHHHHHHHHhcCCEEEEEec
Confidence            999998532 23 556666664457776654

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=94.28  E-value=0.31  Score=39.62  Aligned_cols=103  Identities=17%  Similarity=0.134  Sum_probs=58.2

Q ss_pred             cccccHHHHHHHHHHCCC-eEEEEEcCCccc---ccCCCCC------C-----chhhhhccCceEEEEe--cCCChhhHH
Q 021331            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI---AQQLPGE------S-----DQEFAEFSSKILHLKG--DRKDYDFVK   65 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~~~~~------~-----~~~~~~~~~~~~~~~~--D~~d~~~l~   65 (314)
                      |.|.+|.++++.|...|. ++++++++.-..   .+.+...      .     ..++.+..+.+++...  ++ +.+.+.
T Consensus        35 G~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~-~~~~~~  113 (251)
T 1zud_1           35 GLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRL-TGEALK  113 (251)
T ss_dssp             CCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC-CHHHHH
T ss_pred             ccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccC-CHHHHH
Confidence            458899999999999994 788887764221   1111000      0     0111222234443333  33 446677


Q ss_pred             HhhhcCCccEEEEcCCCCcccHHHHHHhCC-CCCcEEEEeeceee
Q 021331           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVY  109 (314)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss~~v~  109 (314)
                      ++++  ++|+||.+.. +...-..+.+.|. ....+|..+..+.+
T Consensus       114 ~~~~--~~DvVi~~~d-~~~~r~~l~~~~~~~~~p~i~~~~~g~~  155 (251)
T 1zud_1          114 DAVA--RADVVLDCTD-NMATRQEINAACVALNTPLITASAVGFG  155 (251)
T ss_dssp             HHHH--HCSEEEECCS-SHHHHHHHHHHHHHTTCCEEEEEEEBTE
T ss_pred             HHHh--cCCEEEECCC-CHHHHHHHHHHHHHhCCCEEEEeccccc
Confidence            7887  8999998876 3333333444454 44567776654433

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=94.28  E-value=0.028  Score=46.81  Aligned_cols=60  Identities=18%  Similarity=0.213  Sum_probs=42.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|..+++.|.+.|++|++.+|+++.......           .++..       ..+..++++  ++|+||-+...
T Consensus         8 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g~~~-------~~~~~~~~~--~advvi~~v~~   67 (287)
T 3pdu_A            8 GLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVA-----------LGARQ-------ASSPAEVCA--ACDITIAMLAD   67 (287)
T ss_dssp             CCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHH-----------HTCEE-------CSCHHHHHH--HCSEEEECCSS
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-----------CCCee-------cCCHHHHHH--cCCEEEEEcCC
Confidence            57999999999999999999999998776331110           12211       123556666  78999987754

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=94.26  E-value=0.12  Score=44.14  Aligned_cols=82  Identities=16%  Similarity=0.141  Sum_probs=57.5

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|.+|++.+|+.....   .           ..+.+        .++++++.  ++|+|+.+...
T Consensus       155 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~---~-----------~~~~~--------~~l~ell~--~aDvV~l~~Pl  210 (343)
T 2yq5_A          155 GVGHIGSAVAEIFSAMGAKVIAYDVAYNPEF---E-----------PFLTY--------TDFDTVLK--EADIVSLHTPL  210 (343)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCGGG---T-----------TTCEE--------CCHHHHHH--HCSEEEECCCC
T ss_pred             ecCHHHHHHHHHHhhCCCEEEEECCChhhhh---h-----------ccccc--------cCHHHHHh--cCCEEEEcCCC
Confidence            5699999999999999999999999875411   1           12211        14677888  89999987664


Q ss_pred             Cc----ccHHHHHHhCCCCCcEEEEeecee
Q 021331           83 EA----DEVEPILDALPNLEQFIYCSSAGV  108 (314)
Q Consensus        83 ~~----~~~~~~~~~~~~~~~~i~~Ss~~v  108 (314)
                      +.    .-....+..|+...-+|.+|...+
T Consensus       211 t~~t~~li~~~~l~~mk~gailIN~aRg~~  240 (343)
T 2yq5_A          211 FPSTENMIGEKQLKEMKKSAYLINCARGEL  240 (343)
T ss_dssp             CTTTTTCBCHHHHHHSCTTCEEEECSCGGG
T ss_pred             CHHHHHHhhHHHHhhCCCCcEEEECCCChh
Confidence            22    113456777886667887776544

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=94.26  E-value=0.086  Score=44.14  Aligned_cols=29  Identities=24%  Similarity=0.450  Sum_probs=25.8

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCCc
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~   30 (314)
                      ||.|.+|..++..|.+.|++|++.+|++.
T Consensus        28 Gg~G~mG~~la~~l~~~G~~V~~~~~~~~   56 (298)
T 2pv7_A           28 GGYGKLGGLFARYLRASGYPISILDREDW   56 (298)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             cCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence            56899999999999999999999987653

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=94.22  E-value=0.12  Score=43.34  Aligned_cols=79  Identities=18%  Similarity=0.144  Sum_probs=53.7

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|++|++.+|+... .   .                    .....++.+++.  ++|+|+.+...
T Consensus       131 G~G~IG~~~A~~l~~~G~~V~~~dr~~~~-~---~--------------------~~~~~~l~ell~--~aDvV~l~~P~  184 (303)
T 1qp8_A          131 GLGEIGTRVGKILAALGAQVRGFSRTPKE-G---P--------------------WRFTNSLEEALR--EARAAVCALPL  184 (303)
T ss_dssp             SCSTHHHHHHHHHHHTTCEEEEECSSCCC-S---S--------------------SCCBSCSHHHHT--TCSEEEECCCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCccc-c---C--------------------cccCCCHHHHHh--hCCEEEEeCcC
Confidence            56999999999999999999999887651 1   0                    011223567777  89999977654


Q ss_pred             Cc--cc--HHHHHHhCCCCCcEEEEeece
Q 021331           83 EA--DE--VEPILDALPNLEQFIYCSSAG  107 (314)
Q Consensus        83 ~~--~~--~~~~~~~~~~~~~~i~~Ss~~  107 (314)
                      ..  .+  ....+..++...-+|.+|+..
T Consensus       185 ~~~t~~~i~~~~l~~mk~gailin~srg~  213 (303)
T 1qp8_A          185 NKHTRGLVKYQHLALMAEDAVFVNVGRAE  213 (303)
T ss_dssp             STTTTTCBCHHHHTTSCTTCEEEECSCGG
T ss_pred             chHHHHHhCHHHHhhCCCCCEEEECCCCc
Confidence            32  11  235666677656777777643

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=94.19  E-value=0.061  Score=45.11  Aligned_cols=83  Identities=16%  Similarity=0.234  Sum_probs=54.7

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|..+++.|...|.+|++.+|+.++... +        .+  .++..+     +.+++.+++.  ++|+|+.+...
T Consensus       164 G~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~-~--------~~--~g~~~~-----~~~~l~~~l~--~aDvVi~~~p~  225 (300)
T 2rir_A          164 GLGRTGMTIARTFAALGANVKVGARSSAHLAR-I--------TE--MGLVPF-----HTDELKEHVK--DIDICINTIPS  225 (300)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-H--------HH--TTCEEE-----EGGGHHHHST--TCSEEEECCSS
T ss_pred             cccHHHHHHHHHHHHCCCEEEEEECCHHHHHH-H--------HH--CCCeEE-----chhhHHHHhh--CCCEEEECCCh
Confidence            45999999999999999999999998654211 0        00  123222     2245777787  89999998876


Q ss_pred             CcccHHHHHHhCCCCCcEEEEe
Q 021331           83 EADEVEPILDALPNLEQFIYCS  104 (314)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~i~~S  104 (314)
                      .... ...++.++....+|.++
T Consensus       226 ~~i~-~~~~~~mk~g~~lin~a  246 (300)
T 2rir_A          226 MILN-QTVLSSMTPKTLILDLA  246 (300)
T ss_dssp             CCBC-HHHHTTSCTTCEEEECS
T ss_pred             hhhC-HHHHHhCCCCCEEEEEe
Confidence            4332 34556666545566544

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=94.18  E-value=0.033  Score=47.99  Aligned_cols=72  Identities=17%  Similarity=0.221  Sum_probs=46.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-CCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-KGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-~~~d~vi~~a~   81 (314)
                      |.|.+|..+++.|.+.|++|++.+|+++.......           .++.    ...+   +.+++.. ..+|+||-+..
T Consensus        29 GlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~-----------~g~~----~~~s---~~e~~~~a~~~DvVi~~vp   90 (358)
T 4e21_A           29 GLGRMGADMVRRLRKGGHECVVYDLNVNAVQALER-----------EGIA----GARS---IEEFCAKLVKPRVVWLMVP   90 (358)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-----------TTCB----CCSS---HHHHHHHSCSSCEEEECSC
T ss_pred             CchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----------CCCE----EeCC---HHHHHhcCCCCCEEEEeCC
Confidence            57999999999999999999999998765332111           1221    1123   3444441 14599998876


Q ss_pred             CCcccHHHHHHhC
Q 021331           82 READEVEPILDAL   94 (314)
Q Consensus        82 ~~~~~~~~~~~~~   94 (314)
                      ..  .+..+++.+
T Consensus        91 ~~--~v~~vl~~l  101 (358)
T 4e21_A           91 AA--VVDSMLQRM  101 (358)
T ss_dssp             GG--GHHHHHHHH
T ss_pred             HH--HHHHHHHHH
Confidence            54  455555443

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=94.18  E-value=0.027  Score=48.36  Aligned_cols=91  Identities=14%  Similarity=0.080  Sum_probs=57.5

Q ss_pred             CCcccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChh---hHHHhhhcCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~l~~~~~~~~~d~v   76 (314)
                      +|+ |.+|..+++.+...|. +|+++++++++... .        .+  .+... ..|..+.+   .+.++....++|+|
T Consensus       174 ~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~-~--------~~--~Ga~~-~~~~~~~~~~~~v~~~~~g~g~D~v  240 (348)
T 2d8a_A          174 TGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRREL-A--------KK--VGADY-VINPFEEDVVKEVMDITDGNGVDVF  240 (348)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHH-H--------HH--HTCSE-EECTTTSCHHHHHHHHTTTSCEEEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-H--------HH--hCCCE-EECCCCcCHHHHHHHHcCCCCCCEE
Confidence            478 9999999999999998 99999988655321 1        01  12222 23555433   23333222369999


Q ss_pred             EEcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        77 i~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      |++++. .......++.++...+++.+++
T Consensus       241 id~~g~-~~~~~~~~~~l~~~G~iv~~g~  268 (348)
T 2d8a_A          241 LEFSGA-PKALEQGLQAVTPAGRVSLLGL  268 (348)
T ss_dssp             EECSCC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred             EECCCC-HHHHHHHHHHHhcCCEEEEEcc
Confidence            999984 2334556666764457887665

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=94.17  E-value=0.0093  Score=53.19  Aligned_cols=29  Identities=14%  Similarity=0.351  Sum_probs=26.7

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |+|++|..++..|.+.|++|++++|+++.
T Consensus         9 G~G~vG~~lA~~La~~G~~V~~~D~~~~~   37 (450)
T 3gg2_A            9 GIGYVGLVSATCFAELGANVRCIDTDRNK   37 (450)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CcCHHHHHHHHHHHhcCCEEEEEECCHHH
Confidence            56999999999999999999999998765

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=94.07  E-value=0.011  Score=49.43  Aligned_cols=69  Identities=14%  Similarity=0.133  Sum_probs=45.0

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |+||.+|..+++.|.+.|++|++.+|+++.....         .+  .++     +..+   ..+++.  ++|+||.+..
T Consensus        18 G~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~---------~~--~g~-----~~~~---~~~~~~--~aDvVi~av~   76 (286)
T 3c24_A           18 GAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRL---------QG--MGI-----PLTD---GDGWID--EADVVVLALP   76 (286)
T ss_dssp             TTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHH---------HH--TTC-----CCCC---SSGGGG--TCSEEEECSC
T ss_pred             CCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH---------Hh--cCC-----CcCC---HHHHhc--CCCEEEEcCC
Confidence            6679999999999999999999999876543211         10  121     1122   234555  8999998876


Q ss_pred             CCcccHHHHHHh
Q 021331           82 READEVEPILDA   93 (314)
Q Consensus        82 ~~~~~~~~~~~~   93 (314)
                      ...  +..+++.
T Consensus        77 ~~~--~~~v~~~   86 (286)
T 3c24_A           77 DNI--IEKVAED   86 (286)
T ss_dssp             HHH--HHHHHHH
T ss_pred             chH--HHHHHHH
Confidence            433  4444444

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=94.04  E-value=0.098  Score=44.63  Aligned_cols=81  Identities=17%  Similarity=0.080  Sum_probs=52.8

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|+.+++.|...|++|++.+|++...                .+...       ..++.+++.  ++|+|+.+...
T Consensus       178 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~~~~-------~~sl~ell~--~aDvVil~vP~  232 (340)
T 4dgs_A          178 GLGQIGRALASRAEAFGMSVRYWNRSTLSG----------------VDWIA-------HQSPVDLAR--DSDVLAVCVAA  232 (340)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSCCTT----------------SCCEE-------CSSHHHHHH--TCSEEEECC--
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEcCCcccc----------------cCcee-------cCCHHHHHh--cCCEEEEeCCC
Confidence            569999999999999999999999876541                11111       235778888  89999977653


Q ss_pred             Cc--cc--HHHHHHhCCCCCcEEEEeecee
Q 021331           83 EA--DE--VEPILDALPNLEQFIYCSSAGV  108 (314)
Q Consensus        83 ~~--~~--~~~~~~~~~~~~~~i~~Ss~~v  108 (314)
                      +.  .+  ....+..++....+|.+|...+
T Consensus       233 t~~t~~li~~~~l~~mk~gailIN~aRG~v  262 (340)
T 4dgs_A          233 SAATQNIVDASLLQALGPEGIVVNVARGNV  262 (340)
T ss_dssp             --------CHHHHHHTTTTCEEEECSCC--
T ss_pred             CHHHHHHhhHHHHhcCCCCCEEEECCCCcc
Confidence            22  11  2355666776567777766544

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=94.01  E-value=0.067  Score=39.19  Aligned_cols=73  Identities=12%  Similarity=0.118  Sum_probs=45.5

Q ss_pred             cccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCCCc
Q 021331            5 RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREA   84 (314)
Q Consensus         5 G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~~~   84 (314)
                      |.+|..+++.|++.|++|+.++++....                .++.       -..++.++..  .+|+++-+..  .
T Consensus        27 g~~G~~~~~~L~~~G~~V~~vnp~~~~i----------------~G~~-------~~~s~~el~~--~vDlvii~vp--~   79 (138)
T 1y81_A           27 AKYGNIILKDLLSKGFEVLPVNPNYDEI----------------EGLK-------CYRSVRELPK--DVDVIVFVVP--P   79 (138)
T ss_dssp             TSHHHHHHHHHHHTTCEEEEECTTCSEE----------------TTEE-------CBSSGGGSCT--TCCEEEECSC--H
T ss_pred             CCHHHHHHHHHHHCCCEEEEeCCCCCeE----------------CCee-------ecCCHHHhCC--CCCEEEEEeC--H
Confidence            8999999999999999988776654331                1221       1222334444  7899887766  3


Q ss_pred             ccHHHHHHhCC--CCCcEEEEe
Q 021331           85 DEVEPILDALP--NLEQFIYCS  104 (314)
Q Consensus        85 ~~~~~~~~~~~--~~~~~i~~S  104 (314)
                      .....+++.+.  +++.++..+
T Consensus        80 ~~v~~v~~~~~~~g~~~i~~~~  101 (138)
T 1y81_A           80 KVGLQVAKEAVEAGFKKLWFQP  101 (138)
T ss_dssp             HHHHHHHHHHHHTTCCEEEECT
T ss_pred             HHHHHHHHHHHHcCCCEEEEcC
Confidence            44555555443  665555433

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=94.01  E-value=0.033  Score=48.32  Aligned_cols=88  Identities=15%  Similarity=0.133  Sum_probs=57.2

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |+ |.+|...++.+...|.+|+++++++++... .        .+  .+... ..|..+.+.++++..  ++|+||+++|
T Consensus       202 Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~-a--------~~--lGa~~-vi~~~~~~~~~~~~~--g~Dvvid~~g  266 (369)
T 1uuf_A          202 GI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-A--------KA--LGADE-VVNSRNADEMAAHLK--SFDFILNTVA  266 (369)
T ss_dssp             CC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-H--------HH--HTCSE-EEETTCHHHHHTTTT--CEEEEEECCS
T ss_pred             CC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H--------HH--cCCcE-EeccccHHHHHHhhc--CCCEEEECCC
Confidence            66 789999999998899999999988765321 1        11  12221 246666555555444  8999999998


Q ss_pred             CCcccHHHHHHhCCCCCcEEEEee
Q 021331           82 READEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ... .....++.++...+++.++.
T Consensus       267 ~~~-~~~~~~~~l~~~G~iv~~G~  289 (369)
T 1uuf_A          267 APH-NLDDFTTLLKRDGTMTLVGA  289 (369)
T ss_dssp             SCC-CHHHHHTTEEEEEEEEECCC
T ss_pred             CHH-HHHHHHHHhccCCEEEEecc
Confidence            532 24455666664457776554

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=93.98  E-value=0.023  Score=46.94  Aligned_cols=30  Identities=17%  Similarity=0.022  Sum_probs=26.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      +|+ |.+|.+++..|.+.|.+|++.+|+.++
T Consensus       125 iGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~  154 (271)
T 1nyt_A          125 IGA-GGASRGVLLPLLSLDCAVTITNRTVSR  154 (271)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             ECC-cHHHHHHHHHHHHcCCEEEEEECCHHH
Confidence            466 789999999999999999999998654

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=93.79  E-value=0.09  Score=46.40  Aligned_cols=61  Identities=16%  Similarity=0.126  Sum_probs=46.6

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      |.|.+|..+++.+.+.|++|++++..+........             -..+..|+.|.+.+.++..  ++|+|+.
T Consensus        42 G~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~a-------------d~~~~~~~~d~~~l~~~a~--~~D~V~~  102 (419)
T 4e4t_A           42 GGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVA-------------DRHLRAAYDDEAALAELAG--LCEAVST  102 (419)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHS-------------SEEECCCTTCHHHHHHHHH--HCSEEEE
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhC-------------CEEEECCcCCHHHHHHHHh--cCCEEEE
Confidence            45899999999999999999999866543221111             2345689999999999987  8999984

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=93.78  E-value=0.0075  Score=51.44  Aligned_cols=90  Identities=18%  Similarity=0.194  Sum_probs=53.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh--hhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY--DFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~--~~l~~~~~~~~~d~vi~   78 (314)
                      +||+|.+|..+++.+...|.+|+++++++++...         ..++  +...+ .|..+.  +.+.+ +...++|+||+
T Consensus       157 ~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~---------~~~l--Ga~~v-~~~~~~~~~~~~~-~~~~~~d~vid  223 (330)
T 1tt7_A          157 TGATGGVGGIAVSMLNKRGYDVVASTGNREAADY---------LKQL--GASEV-ISREDVYDGTLKA-LSKQQWQGAVD  223 (330)
T ss_dssp             ESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH---------HHHH--TCSEE-EEHHHHCSSCCCS-SCCCCEEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHc--CCcEE-EECCCchHHHHHH-hhcCCccEEEE
Confidence            4889999999999999999999999988655321         1111  12111 233221  11111 11236999999


Q ss_pred             cCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           79 INGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ++|.  ......++.++...+++.++.
T Consensus       224 ~~g~--~~~~~~~~~l~~~G~iv~~G~  248 (330)
T 1tt7_A          224 PVGG--KQLASLLSKIQYGGSVAVSGL  248 (330)
T ss_dssp             SCCT--HHHHHHHTTEEEEEEEEECCC
T ss_pred             CCcH--HHHHHHHHhhcCCCEEEEEec
Confidence            9985  234445555554457776543

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=93.77  E-value=0.036  Score=47.75  Aligned_cols=89  Identities=18%  Similarity=0.142  Sum_probs=57.5

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      | +|.+|...++.+...|.+|+++++++++......        +  -+... ..|..+.+.+.++..  ++|+||+++|
T Consensus       188 G-aG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~--------~--lGa~~-vi~~~~~~~~~~~~~--g~D~vid~~g  253 (357)
T 2cf5_A          188 G-LGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ--------D--LGADD-YVIGSDQAKMSELAD--SLDYVIDTVP  253 (357)
T ss_dssp             C-CSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT--------T--SCCSC-EEETTCHHHHHHSTT--TEEEEEECCC
T ss_pred             C-CCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH--------H--cCCce-eeccccHHHHHHhcC--CCCEEEECCC
Confidence            6 4899999999998889999999988765321110        0  11211 235556666666554  8999999998


Q ss_pred             CCcccHHHHHHhCCCCCcEEEEee
Q 021331           82 READEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ... .....++.++...+++.++.
T Consensus       254 ~~~-~~~~~~~~l~~~G~iv~~G~  276 (357)
T 2cf5_A          254 VHH-ALEPYLSLLKLDGKLILMGV  276 (357)
T ss_dssp             SCC-CSHHHHTTEEEEEEEEECSC
T ss_pred             ChH-HHHHHHHHhccCCEEEEeCC
Confidence            532 23445666664457776554

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=93.76  E-value=0.062  Score=44.47  Aligned_cols=60  Identities=15%  Similarity=0.151  Sum_probs=42.5

Q ss_pred             ccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         4 tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      +|.+|++++..|.+.|. +|++.+|+.++... +.           ..+...     ..+++.+++.  ++|+||++.+.
T Consensus       125 aGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~-la-----------~~~~~~-----~~~~~~~~~~--~aDiVInaTp~  185 (277)
T 3don_A          125 AGGASKGIANELYKIVRPTLTVANRTMSRFNN-WS-----------LNINKI-----NLSHAESHLD--EFDIIINTTPA  185 (277)
T ss_dssp             CSHHHHHHHHHHHTTCCSCCEEECSCGGGGTT-CC-----------SCCEEE-----CHHHHHHTGG--GCSEEEECCC-
T ss_pred             CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH-HH-----------Hhcccc-----cHhhHHHHhc--CCCEEEECccC
Confidence            48999999999999998 89999999876332 22           122211     2345666666  89999998654

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=93.75  E-value=0.044  Score=47.38  Aligned_cols=90  Identities=10%  Similarity=0.017  Sum_probs=59.6

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecC------------------CChhhH
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR------------------KDYDFV   64 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~------------------~d~~~l   64 (314)
                      |.|-+|..+++.|...|.+|++++|++.......         +  .+.+++..+.                  .+.+.+
T Consensus       191 G~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~---------~--lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l  259 (381)
T 3p2y_A          191 GVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVR---------S--VGAQWLDLGIDAAGEGGYARELSEAERAQQQQAL  259 (381)
T ss_dssp             SCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH---------H--TTCEECCCC-------------CHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---------H--cCCeEEeccccccccccchhhhhHHHHhhhHHHH
Confidence            4599999999999999999999999876532111         0  1233332211                  124567


Q ss_pred             HHhhhcCCccEEEEcCCCC-----cccHHHHHHhCCCCCcEEEEee
Q 021331           65 KSSLSAKGFDVVYDINGRE-----ADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        65 ~~~~~~~~~d~vi~~a~~~-----~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      .+++.  ++|+||.++...     ..-+..+++.++...-+|-+|.
T Consensus       260 ~e~l~--~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~  303 (381)
T 3p2y_A          260 EDAIT--KFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAG  303 (381)
T ss_dssp             HHHHT--TCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred             HHHHh--cCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeC
Confidence            77887  999999875321     1236788888886556666654

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=93.63  E-value=0.018  Score=49.81  Aligned_cols=90  Identities=12%  Similarity=0.049  Sum_probs=55.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh-hhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~l~~~~~~~~~d~vi~~   79 (314)
                      +|+ |.+|..+++.+...|.+|+++++++.+...         ..+  .+... ..|..+. +..+.+..  ++|+||++
T Consensus       186 ~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~---------~~~--lGa~~-v~~~~~~~~~~~~~~~--~~D~vid~  250 (360)
T 1piw_A          186 VGL-GGIGSMGTLISKAMGAETYVISRSSRKRED---------AMK--MGADH-YIATLEEGDWGEKYFD--TFDLIVVC  250 (360)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHH---------HHH--HTCSE-EEEGGGTSCHHHHSCS--CEEEEEEC
T ss_pred             ECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHH---------HHH--cCCCE-EEcCcCchHHHHHhhc--CCCEEEEC
Confidence            477 999999999998899999999988765321         111  12222 1355444 33333333  89999999


Q ss_pred             CCCC-cccHHHHHHhCCCCCcEEEEee
Q 021331           80 NGRE-ADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        80 a~~~-~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ++.. .......++.++...+++.++.
T Consensus       251 ~g~~~~~~~~~~~~~l~~~G~iv~~g~  277 (360)
T 1piw_A          251 ASSLTDIDFNIMPKAMKVGGRIVSISI  277 (360)
T ss_dssp             CSCSTTCCTTTGGGGEEEEEEEEECCC
T ss_pred             CCCCcHHHHHHHHHHhcCCCEEEEecC
Confidence            8851 1223344555554457776554

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=93.62  E-value=0.079  Score=46.14  Aligned_cols=90  Identities=16%  Similarity=0.057  Sum_probs=56.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCC----------------------C
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK----------------------D   60 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~----------------------d   60 (314)
                      |+|-+|..+++.+...|.+|+++++++......         ..  -+..++..|..                      +
T Consensus       179 GaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~---------~~--~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~  247 (384)
T 1l7d_A          179 GVGVAGLQAIATAKRLGAVVMATDVRAATKEQV---------ES--LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ  247 (384)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH---------HH--TTCEECCC-----------------------CCH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HH--cCCeEEeecccccccccccccchhhcCHHHHhhh
Confidence            359999999999999999999999887542110         00  12222211110                      1


Q ss_pred             hhhHHHhhhcCCccEEEEcC---CCCc--ccHHHHHHhCCCCCcEEEEee
Q 021331           61 YDFVKSSLSAKGFDVVYDIN---GREA--DEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        61 ~~~l~~~~~~~~~d~vi~~a---~~~~--~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      .+.+.+.+.  ++|+||+++   +...  .-+...++.++....+|.++.
T Consensus       248 ~~~l~~~~~--~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~  295 (384)
T 1l7d_A          248 AEAVLKELV--KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV  295 (384)
T ss_dssp             HHHHHHHHT--TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred             HHHHHHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEec
Confidence            233677777  899999998   4322  124567777875556776653

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=93.58  E-value=0.052  Score=46.56  Aligned_cols=92  Identities=14%  Similarity=0.158  Sum_probs=56.4

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhh---HHHhhhcCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~---l~~~~~~~~~d~v   76 (314)
                      +||+|.+|..+++.+... |.+|+++++++++....         .+.  +... ..|..+.+.   +.++...-++|++
T Consensus       177 ~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~---------~~~--g~~~-~~~~~~~~~~~~~~~~~~~~~~d~v  244 (347)
T 1jvb_A          177 VGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA---------KRA--GADY-VINASMQDPLAEIRRITESKGVDAV  244 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH---------HHH--TCSE-EEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred             ECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH---------HHh--CCCE-EecCCCccHHHHHHHHhcCCCceEE
Confidence            588889999999999999 99999999876553210         111  1221 236655443   3333321279999


Q ss_pred             EEcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        77 i~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      |+++|.. ......++.++...+++.++.
T Consensus       245 i~~~g~~-~~~~~~~~~l~~~G~iv~~g~  272 (347)
T 1jvb_A          245 IDLNNSE-KTLSVYPKALAKQGKYVMVGL  272 (347)
T ss_dssp             EESCCCH-HHHTTGGGGEEEEEEEEECCS
T ss_pred             EECCCCH-HHHHHHHHHHhcCCEEEEECC
Confidence            9999842 123334444554457776554

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=93.57  E-value=0.23  Score=42.49  Aligned_cols=91  Identities=11%  Similarity=0.005  Sum_probs=57.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCC-h---hhHHHhhh---cCCc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-Y---DFVKSSLS---AKGF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~---~~l~~~~~---~~~~   73 (314)
                      +|+ |.+|...++.+...|.+|+++++++++... .        .+  .+... ..|..+ .   +.+.+...   ..++
T Consensus       175 ~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~-~--------~~--lGa~~-~~~~~~~~~~~~~i~~~~~~~~g~g~  241 (352)
T 1e3j_A          175 IGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEV-A--------KN--CGADV-TLVVDPAKEEESSIIERIRSAIGDLP  241 (352)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-H--------HH--TTCSE-EEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred             ECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHH-H--------HH--hCCCE-EEcCcccccHHHHHHHHhccccCCCC
Confidence            365 899999999999899999999887655321 1        11  12221 234443 2   33444332   2479


Q ss_pred             cEEEEcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           74 DVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        74 d~vi~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      |+||+++|.. ......++.++...+++.++.
T Consensus       242 D~vid~~g~~-~~~~~~~~~l~~~G~iv~~G~  272 (352)
T 1e3j_A          242 NVTIDCSGNE-KCITIGINITRTGGTLMLVGM  272 (352)
T ss_dssp             SEEEECSCCH-HHHHHHHHHSCTTCEEEECSC
T ss_pred             CEEEECCCCH-HHHHHHHHHHhcCCEEEEEec
Confidence            9999999852 234556777776668887653

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=93.54  E-value=0.11  Score=42.89  Aligned_cols=85  Identities=15%  Similarity=0.093  Sum_probs=49.2

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEE-EcCCcccc-cCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLF-TRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      +|++|.+|+.+++.+.+. +++++++ +|+.+... ....     ++    .+...   ++.-.+++++++.  ++|+||
T Consensus        13 ~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~g-----el----~g~~~---gv~v~~dl~~ll~--~~DVVI   78 (272)
T 4f3y_A           13 AGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAG-----AF----LGKQT---GVALTDDIERVCA--EADYLI   78 (272)
T ss_dssp             SSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTT-----TT----TTCCC---SCBCBCCHHHHHH--HCSEEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHH-----HH----hCCCC---CceecCCHHHHhc--CCCEEE
Confidence            488999999999999877 5788775 55543211 0000     00    01110   2222345667777  799999


Q ss_pred             EcCCCCcccHHHHHHhCC-CCCcEE
Q 021331           78 DINGREADEVEPILDALP-NLEQFI  101 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~-~~~~~i  101 (314)
                      ++..  +..+...+..|. ...++|
T Consensus        79 DfT~--p~a~~~~~~~al~~G~~vV  101 (272)
T 4f3y_A           79 DFTL--PEGTLVHLDAALRHDVKLV  101 (272)
T ss_dssp             ECSC--HHHHHHHHHHHHHHTCEEE
T ss_pred             EcCC--HHHHHHHHHHHHHcCCCEE
Confidence            9974  333444444444 444555

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=93.51  E-value=0.14  Score=44.53  Aligned_cols=61  Identities=13%  Similarity=0.126  Sum_probs=47.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      |.|.+|..+++.+.+.|++|++++..+......+             .-.++..|+.|.+.+.++.+  .+|+|..
T Consensus        19 G~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~-------------ad~~~~~~~~d~~~l~~~~~--~~dvi~~   79 (377)
T 3orq_A           19 GGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV-------------AHEFIQAKYDDEKALNQLGQ--KCDVITY   79 (377)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG-------------SSEEEECCTTCHHHHHHHHH--HCSEEEE
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhh-------------CCEEEECCCCCHHHHHHHHH--hCCccee
Confidence            4589999999999999999999987655322211             12356789999999999988  7888754

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=93.49  E-value=0.35  Score=39.07  Aligned_cols=29  Identities=17%  Similarity=0.266  Sum_probs=22.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEE-EEcCCc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTL-FTRGKA   30 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~-~~r~~~   30 (314)
                      +|+ |.+|+.+++.+.+.++++++ ++|+..
T Consensus         9 iGa-GrMG~~i~~~l~~~~~eLva~~d~~~~   38 (243)
T 3qy9_A            9 IGY-GAMNQRVARLAEEKGHEIVGVIENTPK   38 (243)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEECSSCC
T ss_pred             ECc-CHHHHHHHHHHHhCCCEEEEEEecCcc
Confidence            377 99999999999998767776 455543

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=93.48  E-value=0.0036  Score=46.41  Aligned_cols=63  Identities=10%  Similarity=0.046  Sum_probs=42.5

Q ss_pred             ccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCCC
Q 021331            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (314)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~~   83 (314)
                      +|.+|..+++.|.+.|++|++.+|+.+.......        .  -+....     ..+++.+++.  ++|+||.+.+..
T Consensus        29 ~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~--------~--~~~~~~-----~~~~~~~~~~--~~Divi~at~~~   91 (144)
T 3oj0_A           29 NGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAE--------K--YEYEYV-----LINDIDSLIK--NNDVIITATSSK   91 (144)
T ss_dssp             CSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHH--------H--HTCEEE-----ECSCHHHHHH--TCSEEEECSCCS
T ss_pred             CCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHH--------H--hCCceE-----eecCHHHHhc--CCCEEEEeCCCC
Confidence            5999999999999999999999998765321110        0  112211     2234566677  899999987754

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=93.47  E-value=0.058  Score=46.30  Aligned_cols=86  Identities=13%  Similarity=0.046  Sum_probs=57.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|.+|++.+|++.......           ..++..       .++++++++  ++|+|+.+...
T Consensus       171 G~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-----------~~g~~~-------~~~l~ell~--~aDvV~l~~Pl  230 (351)
T 3jtm_A          171 GAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEK-----------ETGAKF-------VEDLNEMLP--KCDVIVINMPL  230 (351)
T ss_dssp             CCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHH-----------HHCCEE-------CSCHHHHGG--GCSEEEECSCC
T ss_pred             EeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHH-----------hCCCeE-------cCCHHHHHh--cCCEEEECCCC
Confidence            5699999999999999999999998764321000           012211       135778888  89999987654


Q ss_pred             Cc----ccHHHHHHhCCCCCcEEEEeecee
Q 021331           83 EA----DEVEPILDALPNLEQFIYCSSAGV  108 (314)
Q Consensus        83 ~~----~~~~~~~~~~~~~~~~i~~Ss~~v  108 (314)
                      +.    .-....+..|+....+|.+|...+
T Consensus       231 t~~t~~li~~~~l~~mk~gailIN~aRG~~  260 (351)
T 3jtm_A          231 TEKTRGMFNKELIGKLKKGVLIVNNARGAI  260 (351)
T ss_dssp             CTTTTTCBSHHHHHHSCTTEEEEECSCGGG
T ss_pred             CHHHHHhhcHHHHhcCCCCCEEEECcCchh
Confidence            31    113567777886667777766443

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=93.42  E-value=0.13  Score=43.46  Aligned_cols=60  Identities=18%  Similarity=0.230  Sum_probs=42.5

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|..+++.|.+.|++|++.+|+++.......           .++..       ..++.++++  ++|+||-+...
T Consensus        38 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~-----------~g~~~-------~~~~~e~~~--~aDvVi~~vp~   97 (320)
T 4dll_A           38 GTGSMGLPMARRLCEAGYALQVWNRTPARAASLAA-----------LGATI-------HEQARAAAR--DADIVVSMLEN   97 (320)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-----------TTCEE-------ESSHHHHHT--TCSEEEECCSS
T ss_pred             CccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-----------CCCEe-------eCCHHHHHh--cCCEEEEECCC
Confidence            56999999999999999999999998765332111           12221       123556666  89999977653

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=93.41  E-value=0.095  Score=45.70  Aligned_cols=90  Identities=12%  Similarity=0.023  Sum_probs=59.7

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEec----------------CCC------
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD----------------RKD------   60 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D----------------~~d------   60 (314)
                      |.|-+|..+++.+...|.+|+++++++.......         +  .+..++..+                +++      
T Consensus       197 G~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~---------~--~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~  265 (405)
T 4dio_A          197 GAGVAGLQAIATARRLGAVVSATDVRPAAKEQVA---------S--LGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQ  265 (405)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH---------H--TTCEECCCCC-----------------CHHHHHH
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH---------H--cCCceeecccccccccccccchhhhcchhhhhhh
Confidence            4599999999999999999999999886532110         0  122222211                222      


Q ss_pred             hhhHHHhhhcCCccEEEEcCCCC-----cccHHHHHHhCCCCCcEEEEee
Q 021331           61 YDFVKSSLSAKGFDVVYDINGRE-----ADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        61 ~~~l~~~~~~~~~d~vi~~a~~~-----~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      .+.+.+++.  ++|+||.++...     ..-+..+++.|+...-+|-+|.
T Consensus       266 ~~~l~e~l~--~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~  313 (405)
T 4dio_A          266 AALVAEHIA--KQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAV  313 (405)
T ss_dssp             HHHHHHHHH--TCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTG
T ss_pred             HhHHHHHhc--CCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeC
Confidence            347888888  999999985422     1236788888886666666664

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=93.38  E-value=0.21  Score=43.00  Aligned_cols=94  Identities=11%  Similarity=0.075  Sum_probs=58.0

Q ss_pred             CCcccccHHHHHHHHHHCCCe-EEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhh----hcCCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL----SAKGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~----~~~~~d~   75 (314)
                      +|+ |.+|...++.+...|.+ |+++++++++... .        .++...+..+..|-.+.+.+.+.+    ...++|+
T Consensus       186 ~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a--------~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dv  255 (363)
T 3m6i_A          186 CGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKF-A--------KEICPEVVTHKVERLSAEESAKKIVESFGGIEPAV  255 (363)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHH-H--------HHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-H--------HHhchhcccccccccchHHHHHHHHHHhCCCCCCE
Confidence            366 99999999999999986 8888887665321 1        111122322333433334343333    2347999


Q ss_pred             EEEcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           76 VYDINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        76 vi~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ||++.|. .......++.++...+++.++.
T Consensus       256 vid~~g~-~~~~~~~~~~l~~~G~iv~~G~  284 (363)
T 3m6i_A          256 ALECTGV-ESSIAAAIWAVKFGGKVFVIGV  284 (363)
T ss_dssp             EEECSCC-HHHHHHHHHHSCTTCEEEECCC
T ss_pred             EEECCCC-hHHHHHHHHHhcCCCEEEEEcc
Confidence            9999884 2234567777776668887654

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=93.36  E-value=0.03  Score=48.04  Aligned_cols=90  Identities=10%  Similarity=0.071  Sum_probs=55.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCC--hhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~l~~~~~~~~~d~vi~   78 (314)
                      +||+|.+|...++.+...|.+|++++++.++...         ..+  .+...+ .|..+  .+.+.+. ...++|+||+
T Consensus       157 ~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~---------~~~--lGa~~v-i~~~~~~~~~~~~~-~~~g~Dvv~d  223 (346)
T 3fbg_A          157 INGAGGVGSIATQIAKAYGLRVITTASRNETIEW---------TKK--MGADIV-LNHKESLLNQFKTQ-GIELVDYVFC  223 (346)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHH---------HHH--HTCSEE-ECTTSCHHHHHHHH-TCCCEEEEEE
T ss_pred             EcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHh--cCCcEE-EECCccHHHHHHHh-CCCCccEEEE
Confidence            4899999999999999999999999987655321         111  122211 23332  1233333 2236999999


Q ss_pred             cCCCCcccHHHHHHhCCCCCcEEEEe
Q 021331           79 INGREADEVEPILDALPNLEQFIYCS  104 (314)
Q Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~i~~S  104 (314)
                      ++|.. ......++.++...+++.++
T Consensus       224 ~~g~~-~~~~~~~~~l~~~G~iv~~~  248 (346)
T 3fbg_A          224 TFNTD-MYYDDMIQLVKPRGHIATIV  248 (346)
T ss_dssp             SSCHH-HHHHHHHHHEEEEEEEEESS
T ss_pred             CCCch-HHHHHHHHHhccCCEEEEEC
Confidence            98732 22345566666445776543

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=93.36  E-value=0.15  Score=43.40  Aligned_cols=79  Identities=19%  Similarity=0.204  Sum_probs=52.8

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|+.+++.|...|++|++.+|+....                .++..       ..++.++++  ++|+|+.+...
T Consensus       171 G~G~iG~~vA~~l~~~G~~V~~~dr~~~~~----------------~g~~~-------~~~l~ell~--~aDvVil~vP~  225 (333)
T 3ba1_A          171 GLGRIGLAVAERAEAFDCPISYFSRSKKPN----------------TNYTY-------YGSVVELAS--NSDILVVACPL  225 (333)
T ss_dssp             CCSHHHHHHHHHHHTTTCCEEEECSSCCTT----------------CCSEE-------ESCHHHHHH--TCSEEEECSCC
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCCchhc----------------cCcee-------cCCHHHHHh--cCCEEEEecCC
Confidence            569999999999999999999999876542                11211       123567777  89999987665


Q ss_pred             Cc--ccH--HHHHHhCCCCCcEEEEeec
Q 021331           83 EA--DEV--EPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        83 ~~--~~~--~~~~~~~~~~~~~i~~Ss~  106 (314)
                      ..  ...  ...+..++....+|.+|+.
T Consensus       226 ~~~t~~li~~~~l~~mk~gailIn~srG  253 (333)
T 3ba1_A          226 TPETTHIINREVIDALGPKGVLINIGRG  253 (333)
T ss_dssp             CGGGTTCBCHHHHHHHCTTCEEEECSCG
T ss_pred             ChHHHHHhhHHHHhcCCCCCEEEECCCC
Confidence            32  111  3456666655556655553

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=93.34  E-value=0.037  Score=46.01  Aligned_cols=29  Identities=21%  Similarity=0.268  Sum_probs=26.4

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |+|.+|..++..|.+.|++|++.+|+++.
T Consensus        11 GaG~mG~~iA~~la~~G~~V~l~d~~~~~   39 (283)
T 4e12_A           11 GTGVLGSQIAFQTAFHGFAVTAYDINTDA   39 (283)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            46999999999999999999999998765

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=93.30  E-value=0.19  Score=37.05  Aligned_cols=74  Identities=11%  Similarity=0.013  Sum_probs=44.5

Q ss_pred             Ccc---cccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            2 GGT---RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         2 Gat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      |++   |.+|..+++.|.+.|++|+.+..+...    +            .++.       -..++.++..  .+|.++-
T Consensus        29 Gas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~----i------------~G~~-------~y~sl~~l~~--~vDlvvi   83 (144)
T 2d59_A           29 GASPKPERDANIVMKYLLEHGYDVYPVNPKYEE----V------------LGRK-------CYPSVLDIPD--KIEVVDL   83 (144)
T ss_dssp             TCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE----E------------TTEE-------CBSSGGGCSS--CCSEEEE
T ss_pred             ccCCCCCchHHHHHHHHHHCCCEEEEECCCCCe----E------------CCee-------ccCCHHHcCC--CCCEEEE
Confidence            676   899999999999999987665433211    0            1221       1122333333  7898887


Q ss_pred             cCCCCcccHHHHHHhCC--CCCcEEE
Q 021331           79 INGREADEVEPILDALP--NLEQFIY  102 (314)
Q Consensus        79 ~a~~~~~~~~~~~~~~~--~~~~~i~  102 (314)
                      +...  .....+++.|.  +++.+++
T Consensus        84 ~vp~--~~~~~vv~~~~~~gi~~i~~  107 (144)
T 2d59_A           84 FVKP--KLTMEYVEQAIKKGAKVVWF  107 (144)
T ss_dssp             CSCH--HHHHHHHHHHHHHTCSEEEE
T ss_pred             EeCH--HHHHHHHHHHHHcCCCEEEE
Confidence            6543  45556665554  6665543

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=93.29  E-value=0.1  Score=38.61  Aligned_cols=28  Identities=14%  Similarity=0.165  Sum_probs=23.6

Q ss_pred             Ccc---cccHHHHHHHHHHCCCeEEEEEcCC
Q 021331            2 GGT---RFIGVFLSRLLVKEGHQVTLFTRGK   29 (314)
Q Consensus         2 Gat---G~iG~~l~~~L~~~g~~V~~~~r~~   29 (314)
                      |++   |.+|..+++.|++.|++|+.++++.
T Consensus        20 Gas~~~g~~G~~~~~~L~~~G~~v~~vnp~~   50 (145)
T 2duw_A           20 GASDKPDRPSYRVMKYLLDQGYHVIPVSPKV   50 (145)
T ss_dssp             SCCSCTTSHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             CcCCCCCChHHHHHHHHHHCCCEEEEeCCcc
Confidence            665   8899999999999999987776654

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=93.26  E-value=0.11  Score=43.50  Aligned_cols=30  Identities=13%  Similarity=0.157  Sum_probs=27.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~   32 (314)
                      |.|.+|..+++.|.+.|++|++.+|+++..
T Consensus        22 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~   51 (296)
T 3qha_A           22 GLGNMGAPMATRMTEWPGGVTVYDIRIEAM   51 (296)
T ss_dssp             CCSTTHHHHHHHHTTSTTCEEEECSSTTTS
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence            579999999999999999999999988763

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=93.25  E-value=0.08  Score=46.43  Aligned_cols=92  Identities=16%  Similarity=0.100  Sum_probs=56.7

Q ss_pred             CCcccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChh---hHHHhhhcCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~l~~~~~~~~~d~v   76 (314)
                      +|+ |.+|...++.+...|. +|+++++++.+... .        .+  -+... ..|..+.+   .+.++....++|+|
T Consensus       220 ~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-~--------~~--lGa~~-vi~~~~~~~~~~i~~~t~g~g~D~v  286 (404)
T 3ip1_A          220 LGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNL-A--------KE--LGADH-VIDPTKENFVEAVLDYTNGLGAKLF  286 (404)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH-H--------HH--HTCSE-EECTTTSCHHHHHHHHTTTCCCSEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-H--------HH--cCCCE-EEcCCCCCHHHHHHHHhCCCCCCEE
Confidence            366 9999999999999998 89998887665321 1        11  12222 23454433   33444433479999


Q ss_pred             EEcCCCCcccHHHHHHhC----CCCCcEEEEee
Q 021331           77 YDINGREADEVEPILDAL----PNLEQFIYCSS  105 (314)
Q Consensus        77 i~~a~~~~~~~~~~~~~~----~~~~~~i~~Ss  105 (314)
                      |.+.|........+++++    +...+++.++.
T Consensus       287 id~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~  319 (404)
T 3ip1_A          287 LEATGVPQLVWPQIEEVIWRARGINATVAIVAR  319 (404)
T ss_dssp             EECSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred             EECCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence            999986533333444444    65568886654

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=93.21  E-value=0.077  Score=45.39  Aligned_cols=84  Identities=15%  Similarity=0.105  Sum_probs=57.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|.+|++.+|++.....             ..++.+       .+++.+++.  ++|+|+.+...
T Consensus       180 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-------------~~g~~~-------~~~l~ell~--~sDvV~l~~Pl  237 (345)
T 4g2n_A          180 GMGRIGRAIATRARGFGLAIHYHNRTRLSHAL-------------EEGAIY-------HDTLDSLLG--ASDIFLIAAPG  237 (345)
T ss_dssp             SCSHHHHHHHHHHHTTTCEEEEECSSCCCHHH-------------HTTCEE-------CSSHHHHHH--TCSEEEECSCC
T ss_pred             EeChhHHHHHHHHHHCCCEEEEECCCCcchhh-------------hcCCeE-------eCCHHHHHh--hCCEEEEecCC
Confidence            56999999999999999999999987643110             011211       135778888  89999977654


Q ss_pred             Ccc----cHHHHHHhCCCCCcEEEEeecee
Q 021331           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (314)
Q Consensus        83 ~~~----~~~~~~~~~~~~~~~i~~Ss~~v  108 (314)
                      +..    -....+..|+....||.+|...+
T Consensus       238 t~~T~~li~~~~l~~mk~gailIN~aRG~~  267 (345)
T 4g2n_A          238 RPELKGFLDHDRIAKIPEGAVVINISRGDL  267 (345)
T ss_dssp             CGGGTTCBCHHHHHHSCTTEEEEECSCGGG
T ss_pred             CHHHHHHhCHHHHhhCCCCcEEEECCCCch
Confidence            321    13456777776667777766444

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=93.21  E-value=0.074  Score=43.39  Aligned_cols=61  Identities=8%  Similarity=0.034  Sum_probs=43.1

Q ss_pred             cccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |+|.+|++++..|.+.|. +|++.+|+.++......            .+...     ..+++.+.+.  ++|+||++..
T Consensus       115 GaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~------------~~~~~-----~~~~~~~~~~--~aDiVInatp  175 (253)
T 3u62_A          115 GAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDF------------PVKIF-----SLDQLDEVVK--KAKSLFNTTS  175 (253)
T ss_dssp             CCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCS------------SCEEE-----EGGGHHHHHH--TCSEEEECSS
T ss_pred             CcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH------------HcccC-----CHHHHHhhhc--CCCEEEECCC
Confidence            459999999999999997 89999998776432221            12111     2244666777  8999999864


Q ss_pred             C
Q 021331           82 R   82 (314)
Q Consensus        82 ~   82 (314)
                      .
T Consensus       176 ~  176 (253)
T 3u62_A          176 V  176 (253)
T ss_dssp             T
T ss_pred             C
Confidence            3

>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1

Probab=93.20  E-value=0.17  Score=43.01  Aligned_cols=81  Identities=14%  Similarity=0.005  Sum_probs=55.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|++|++.+|+....   ..           ..+.     ..   ++.+++.  ++|+|+.+...
T Consensus       152 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~---~~-----------~~~~-----~~---~l~ell~--~aDvV~~~~P~  207 (333)
T 1dxy_A          152 GTGHIGQVAIKLFKGFGAKVIAYDPYPMKG---DH-----------PDFD-----YV---SLEDLFK--QSDVIDLHVPG  207 (333)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSS---CC-----------TTCE-----EC---CHHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCcchh---hH-----------hccc-----cC---CHHHHHh--cCCEEEEcCCC
Confidence            569999999999999999999999877542   11           1111     11   4667777  89999987665


Q ss_pred             Ccc----cHHHHHHhCCCCCcEEEEeece
Q 021331           83 EAD----EVEPILDALPNLEQFIYCSSAG  107 (314)
Q Consensus        83 ~~~----~~~~~~~~~~~~~~~i~~Ss~~  107 (314)
                      ...    -....+..++....+|.+|+..
T Consensus       208 ~~~t~~li~~~~l~~mk~ga~lIn~srg~  236 (333)
T 1dxy_A          208 IEQNTHIINEAAFNLMKPGAIVINTARPN  236 (333)
T ss_dssp             CGGGTTSBCHHHHHHSCTTEEEEECSCTT
T ss_pred             chhHHHHhCHHHHhhCCCCcEEEECCCCc
Confidence            321    1245667777666777776643

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=93.20  E-value=0.055  Score=48.44  Aligned_cols=28  Identities=21%  Similarity=0.388  Sum_probs=26.6

Q ss_pred             cccccHHHHHHHHHHC-CC-eEEEEEcCCc
Q 021331            3 GTRFIGVFLSRLLVKE-GH-QVTLFTRGKA   30 (314)
Q Consensus         3 atG~iG~~l~~~L~~~-g~-~V~~~~r~~~   30 (314)
                      |+|++|..++..|.+. |+ +|++.+++++
T Consensus        25 GlG~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           25 GMGYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             CCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            5799999999999999 99 9999999988

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=93.16  E-value=0.072  Score=47.54  Aligned_cols=82  Identities=11%  Similarity=-0.095  Sum_probs=56.5

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|+.+++.|...|.+|++.++++........           .++.+        ..+.+++.  +.|+|+.+.+.
T Consensus       264 G~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~-----------~g~~~--------~~l~ell~--~aDiVi~~~~t  322 (479)
T 1v8b_A          264 GYGDVGKGCASSMKGLGARVYITEIDPICAIQAVM-----------EGFNV--------VTLDEIVD--KGDFFITCTGN  322 (479)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHT-----------TTCEE--------CCHHHHTT--TCSEEEECCSS
T ss_pred             eeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHH-----------cCCEe--------cCHHHHHh--cCCEEEECCCh
Confidence            46999999999999999999999988754211111           23321        24677887  89999988644


Q ss_pred             CcccHHHHHHhCCCCCcEEEEee
Q 021331           83 EADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ...-....+..|+....+|.+++
T Consensus       323 ~~lI~~~~l~~MK~gailiNvgr  345 (479)
T 1v8b_A          323 VDVIKLEHLLKMKNNAVVGNIGH  345 (479)
T ss_dssp             SSSBCHHHHTTCCTTCEEEECSS
T ss_pred             hhhcCHHHHhhcCCCcEEEEeCC
Confidence            33334466777776667777665

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=93.09  E-value=0.11  Score=43.82  Aligned_cols=83  Identities=16%  Similarity=0.033  Sum_probs=55.5

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|++|++.+|+.....  ..          ..++..     .   ++.+++.  ++|+|+.+...
T Consensus       149 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~--~~----------~~g~~~-----~---~l~ell~--~aDvV~l~~p~  206 (307)
T 1wwk_A          149 GFGRIGYQVAKIANALGMNILLYDPYPNEER--AK----------EVNGKF-----V---DLETLLK--ESDVVTIHVPL  206 (307)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCHHH--HH----------HTTCEE-----C---CHHHHHH--HCSEEEECCCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCCChhh--Hh----------hcCccc-----c---CHHHHHh--hCCEEEEecCC
Confidence            5699999999999999999999998875411  00          022321     1   3567777  89999987654


Q ss_pred             Ccc--c--HHHHHHhCCCCCcEEEEeece
Q 021331           83 EAD--E--VEPILDALPNLEQFIYCSSAG  107 (314)
Q Consensus        83 ~~~--~--~~~~~~~~~~~~~~i~~Ss~~  107 (314)
                      +..  +  ....+..++....+|.+|+..
T Consensus       207 ~~~t~~li~~~~l~~mk~ga~lin~arg~  235 (307)
T 1wwk_A          207 VESTYHLINEERLKLMKKTAILINTSRGP  235 (307)
T ss_dssp             STTTTTCBCHHHHHHSCTTCEEEECSCGG
T ss_pred             ChHHhhhcCHHHHhcCCCCeEEEECCCCc
Confidence            321  1  235667777666777777643

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=93.06  E-value=0.079  Score=45.74  Aligned_cols=84  Identities=12%  Similarity=0.068  Sum_probs=54.2

Q ss_pred             cccccHHHHHHHHHHCCCe-EEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |.|.||+.+++.|...|.+ |++.+|+........           ..++..  .     .++.+++.  ++|+|+.+..
T Consensus       171 G~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~-----------~~g~~~--~-----~~l~ell~--~aDvV~l~~P  230 (364)
T 2j6i_A          171 GAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEE-----------KVGARR--V-----ENIEELVA--QADIVTVNAP  230 (364)
T ss_dssp             CCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHH-----------HTTEEE--C-----SSHHHHHH--TCSEEEECCC
T ss_pred             CcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHH-----------hcCcEe--c-----CCHHHHHh--cCCEEEECCC
Confidence            5699999999999999997 999998764421000           022321  1     24677888  8999998766


Q ss_pred             CCcc--c--HHHHHHhCCCCCcEEEEeec
Q 021331           82 READ--E--VEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        82 ~~~~--~--~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      .+..  +  ....+..|+....+|.+|..
T Consensus       231 ~t~~t~~li~~~~l~~mk~ga~lIn~arG  259 (364)
T 2j6i_A          231 LHAGTKGLINKELLSKFKKGAWLVNTARG  259 (364)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTEEEEECSCG
T ss_pred             CChHHHHHhCHHHHhhCCCCCEEEECCCC
Confidence            5321  1  23456666655566766653

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=93.05  E-value=0.16  Score=43.42  Aligned_cols=87  Identities=18%  Similarity=0.143  Sum_probs=47.4

Q ss_pred             CCcccccHHHHHHHHHHCCC---eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      .||||.+|+.+++.|.++++   +++++...... ...+.          ..+..+...|. +++    .+.  ++|+||
T Consensus        12 iGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~-g~~~~----------~~g~~i~~~~~-~~~----~~~--~~DvV~   73 (340)
T 2hjs_A           12 VGATGSVGEALVGLLDERDFPLHRLHLLASAESA-GQRMG----------FAESSLRVGDV-DSF----DFS--SVGLAF   73 (340)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTT-TCEEE----------ETTEEEECEEG-GGC----CGG--GCSEEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCC-CCccc----------cCCcceEEecC-CHH----Hhc--CCCEEE
Confidence            48999999999999997654   55655432211 00000          01112111222 222    245  899999


Q ss_pred             EcCCCCcccHHHHHHhCC-CCCcEEEEeece
Q 021331           78 DINGREADEVEPILDALP-NLEQFIYCSSAG  107 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss~~  107 (314)
                      .+.+...  ....+..+. ...++|-+|+..
T Consensus        74 ~a~g~~~--s~~~a~~~~~aG~kvId~Sa~~  102 (340)
T 2hjs_A           74 FAAAAEV--SRAHAERARAAGCSVIDLSGAL  102 (340)
T ss_dssp             ECSCHHH--HHHHHHHHHHTTCEEEETTCTT
T ss_pred             EcCCcHH--HHHHHHHHHHCCCEEEEeCCCC
Confidence            9987432  334444443 233577777754

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=92.99  E-value=0.021  Score=48.45  Aligned_cols=86  Identities=17%  Similarity=0.159  Sum_probs=55.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      +||+|.+|...++.+...|.+|++++++.. .. ..        .+  .+... ..|..+.+.+.+.+.  ++|+||++.
T Consensus       159 ~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~-~~-~~--------~~--lGa~~-~i~~~~~~~~~~~~~--g~D~v~d~~  223 (321)
T 3tqh_A          159 HAGAGGVGHLAIQLAKQKGTTVITTASKRN-HA-FL--------KA--LGAEQ-CINYHEEDFLLAIST--PVDAVIDLV  223 (321)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEECHHH-HH-HH--------HH--HTCSE-EEETTTSCHHHHCCS--CEEEEEESS
T ss_pred             EcCCcHHHHHHHHHHHHcCCEEEEEeccch-HH-HH--------HH--cCCCE-EEeCCCcchhhhhcc--CCCEEEECC
Confidence            488999999999999999999998875432 11 11        11  12222 246655554555555  899999998


Q ss_pred             CCCcccHHHHHHhCCCCCcEEEE
Q 021331           81 GREADEVEPILDALPNLEQFIYC  103 (314)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~i~~  103 (314)
                      |...  ....++.++...+++.+
T Consensus       224 g~~~--~~~~~~~l~~~G~iv~~  244 (321)
T 3tqh_A          224 GGDV--GIQSIDCLKETGCIVSV  244 (321)
T ss_dssp             CHHH--HHHHGGGEEEEEEEEEC
T ss_pred             CcHH--HHHHHHhccCCCEEEEe
Confidence            8432  35556666644577754

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=92.97  E-value=0.14  Score=43.63  Aligned_cols=83  Identities=16%  Similarity=0.108  Sum_probs=53.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|+.+++.|...|++|++.+|+........           ..++..     .   ++.+++.  ++|+|+.+...
T Consensus       162 G~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-----------~~g~~~-----~---~l~e~l~--~aDvVi~~vp~  220 (330)
T 2gcg_A          162 GLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAA-----------EFQAEF-----V---STPELAA--QSDFIVVACSL  220 (330)
T ss_dssp             CCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHH-----------TTTCEE-----C---CHHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHH-----------hcCcee-----C---CHHHHHh--hCCEEEEeCCC
Confidence            4699999999999999999999998765321100           012221     1   3556777  89999987764


Q ss_pred             Cc--ccH--HHHHHhCCCCCcEEEEeec
Q 021331           83 EA--DEV--EPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        83 ~~--~~~--~~~~~~~~~~~~~i~~Ss~  106 (314)
                      ..  .+.  ..++..++....+|.+|+.
T Consensus       221 ~~~t~~~i~~~~~~~mk~gailIn~srg  248 (330)
T 2gcg_A          221 TPATEGLCNKDFFQKMKETAVFINISRG  248 (330)
T ss_dssp             CTTTTTCBSHHHHHHSCTTCEEEECSCG
T ss_pred             ChHHHHhhCHHHHhcCCCCcEEEECCCC
Confidence            32  111  3466677755556655553

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=92.97  E-value=0.11  Score=44.85  Aligned_cols=93  Identities=20%  Similarity=0.291  Sum_probs=51.4

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      .||+|++|+.+++.|.+++ .+++++.+..+.. ..+    ......+...+   ..|+.-.+  ++.++  ++|+||.+
T Consensus        22 iGAtG~iG~~llr~L~~~p~~elvai~~~~~~g-~~~----~~~~~~~~~~v---~~dl~~~~--~~~~~--~vDvVf~a   89 (359)
T 1xyg_A           22 LGASGYTGAEIVRLLANHPHFQVTLMTADRKAG-QSM----ESVFPHLRAQK---LPTLVSVK--DADFS--TVDAVFCC   89 (359)
T ss_dssp             ECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTT-SCH----HHHCGGGTTSC---CCCCBCGG--GCCGG--GCSEEEEC
T ss_pred             ECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcC-CCH----HHhCchhcCcc---cccceecc--hhHhc--CCCEEEEc
Confidence            3899999999999999886 4888876543221 000    00000000111   12332222  44555  89999999


Q ss_pred             CCCCcccHHHHHHhCCCCCcEEEEeece
Q 021331           80 NGREADEVEPILDALPNLEQFIYCSSAG  107 (314)
Q Consensus        80 a~~~~~~~~~~~~~~~~~~~~i~~Ss~~  107 (314)
                      .+....  ......+....++|-.|+..
T Consensus        90 tp~~~s--~~~a~~~~aG~~VId~sa~~  115 (359)
T 1xyg_A           90 LPHGTT--QEIIKELPTALKIVDLSADF  115 (359)
T ss_dssp             CCTTTH--HHHHHTSCTTCEEEECSSTT
T ss_pred             CCchhH--HHHHHHHhCCCEEEECCccc
Confidence            875432  33333335234677777754

>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*

Probab=92.91  E-value=0.13  Score=45.41  Aligned_cols=30  Identities=27%  Similarity=0.354  Sum_probs=27.8

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~   32 (314)
                      |.|++|..++..|.+.||+|++.++++++.
T Consensus        18 GlGyvGlp~A~~La~~G~~V~~~D~~~~kv   47 (431)
T 3ojo_A           18 GLGYIGLPTSIMFAKHGVDVLGVDINQQTI   47 (431)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            679999999999999999999999998764

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=92.89  E-value=0.051  Score=45.17  Aligned_cols=71  Identities=11%  Similarity=0.069  Sum_probs=45.5

Q ss_pred             CCcccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      +|+ |.+|++++..|.+.|. +|++++|+.++......     .+......+.+...++   +++.+.+.  ++|+||++
T Consensus       133 lGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~-----~~~~~~~~~~i~~~~~---~~l~~~l~--~~DiVIna  201 (283)
T 3jyo_A          133 VGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALAD-----VINNAVGREAVVGVDA---RGIEDVIA--AADGVVNA  201 (283)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHH-----HHHHHHTSCCEEEECS---TTHHHHHH--HSSEEEEC
T ss_pred             ECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHH-----HHHhhcCCceEEEcCH---HHHHHHHh--cCCEEEEC
Confidence            355 8999999999999997 79999998765321110     1111112233333343   34666777  79999998


Q ss_pred             CCC
Q 021331           80 NGR   82 (314)
Q Consensus        80 a~~   82 (314)
                      ...
T Consensus       202 Tp~  204 (283)
T 3jyo_A          202 TPM  204 (283)
T ss_dssp             SST
T ss_pred             CCC
Confidence            654

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=92.88  E-value=0.1  Score=44.64  Aligned_cols=91  Identities=11%  Similarity=-0.025  Sum_probs=50.0

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      .||||++|+.+++.|.+.+ .+++++.+..+.. ..+..    ....+ .+.  ....+.+.+   + +.  ++|+||.+
T Consensus        10 iGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g-~~~~~----~~~~~-~g~--~~~~~~~~~---~-~~--~vDvV~~a   75 (345)
T 2ozp_A           10 VGASGYAGGEFLRLALSHPYLEVKQVTSRRFAG-EPVHF----VHPNL-RGR--TNLKFVPPE---K-LE--PADILVLA   75 (345)
T ss_dssp             ETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTT-SBGGG----TCGGG-TTT--CCCBCBCGG---G-CC--CCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHcCCCcEEEEEECchhhC-chhHH----hCchh-cCc--ccccccchh---H-hc--CCCEEEEc
Confidence            3899999999999998876 4888776643321 11100    00000 010  011122322   2 45  89999999


Q ss_pred             CCCCcccHHHHHHh-CCCCCcEEEEeece
Q 021331           80 NGREADEVEPILDA-LPNLEQFIYCSSAG  107 (314)
Q Consensus        80 a~~~~~~~~~~~~~-~~~~~~~i~~Ss~~  107 (314)
                      .+....  ..++.. .....++|-+|+..
T Consensus        76 ~g~~~s--~~~a~~~~~aG~~VId~Sa~~  102 (345)
T 2ozp_A           76 LPHGVF--AREFDRYSALAPVLVDLSADF  102 (345)
T ss_dssp             CCTTHH--HHTHHHHHTTCSEEEECSSTT
T ss_pred             CCcHHH--HHHHHHHHHCCCEEEEcCccc
Confidence            876532  233333 23334688888754

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=92.86  E-value=0.096  Score=47.03  Aligned_cols=82  Identities=12%  Similarity=0.082  Sum_probs=56.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||..+++.|...|.+|+++++++.......           ..++..     .+   +.+++.  ++|+||.+.+.
T Consensus       281 G~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~-----------~~Ga~~-----~~---l~e~l~--~aDvVi~atgt  339 (494)
T 3ce6_A          281 GYGDVGKGCAEAMKGQGARVSVTEIDPINALQAM-----------MEGFDV-----VT---VEEAIG--DADIVVTATGN  339 (494)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTCEE-----CC---HHHHGG--GCSEEEECSSS
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HcCCEE-----ec---HHHHHh--CCCEEEECCCC
Confidence            3599999999999999999999998875522111           123332     12   335566  89999998775


Q ss_pred             CcccHHHHHHhCCCCCcEEEEee
Q 021331           83 EADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ........++.++...+++.++.
T Consensus       340 ~~~i~~~~l~~mk~ggilvnvG~  362 (494)
T 3ce6_A          340 KDIIMLEHIKAMKDHAILGNIGH  362 (494)
T ss_dssp             SCSBCHHHHHHSCTTCEEEECSS
T ss_pred             HHHHHHHHHHhcCCCcEEEEeCC
Confidence            44333467777886668887765

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=92.85  E-value=0.097  Score=46.92  Aligned_cols=83  Identities=11%  Similarity=-0.076  Sum_probs=57.5

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|+.+++.|...|.+|++.+|++.......           ..++.+        ..+++++.  ..|+|+.+.+.
T Consensus       284 G~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~-----------~~G~~~--------~~l~ell~--~aDiVi~~~~t  342 (494)
T 3d64_A          284 GYGDVGKGCAQSLRGLGATVWVTEIDPICALQAA-----------MEGYRV--------VTMEYAAD--KADIFVTATGN  342 (494)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH-----------TTTCEE--------CCHHHHTT--TCSEEEECSSS
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH-----------HcCCEe--------CCHHHHHh--cCCEEEECCCc
Confidence            4699999999999999999999998875421101           023322        24778888  89999988643


Q ss_pred             CcccHHHHHHhCCCCCcEEEEeec
Q 021331           83 EADEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      ...-....+..|+....+|.+++.
T Consensus       343 ~~lI~~~~l~~MK~gAilINvgrg  366 (494)
T 3d64_A          343 YHVINHDHMKAMRHNAIVCNIGHF  366 (494)
T ss_dssp             SCSBCHHHHHHCCTTEEEEECSSS
T ss_pred             ccccCHHHHhhCCCCcEEEEcCCC
Confidence            333345677888866677777763

>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}

Probab=92.84  E-value=0.2  Score=42.55  Aligned_cols=81  Identities=11%  Similarity=0.044  Sum_probs=54.5

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|++|++.+|+....   ..           ..+.     .   .++.+++.  ++|+|+.+...
T Consensus       153 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~---~~-----------~~~~-----~---~~l~ell~--~aDvV~~~~p~  208 (331)
T 1xdw_A          153 GLGRIGRVAAQIFHGMGATVIGEDVFEIKG---IE-----------DYCT-----Q---VSLDEVLE--KSDIITIHAPY  208 (331)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCCS---CT-----------TTCE-----E---CCHHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCccHH---HH-----------hccc-----c---CCHHHHHh--hCCEEEEecCC
Confidence            569999999999999999999999876542   11           1111     1   14667777  89999977554


Q ss_pred             Cc--cc--HHHHHHhCCCCCcEEEEeece
Q 021331           83 EA--DE--VEPILDALPNLEQFIYCSSAG  107 (314)
Q Consensus        83 ~~--~~--~~~~~~~~~~~~~~i~~Ss~~  107 (314)
                      ..  .+  ....+..++....+|.+|...
T Consensus       209 t~~t~~li~~~~l~~mk~ga~lin~srg~  237 (331)
T 1xdw_A          209 IKENGAVVTRDFLKKMKDGAILVNCARGQ  237 (331)
T ss_dssp             CTTTCCSBCHHHHHTSCTTEEEEECSCGG
T ss_pred             chHHHHHhCHHHHhhCCCCcEEEECCCcc
Confidence            32  11  245667777656777776543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=92.74  E-value=0.099  Score=45.79  Aligned_cols=90  Identities=13%  Similarity=0.058  Sum_probs=57.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCC-------------Ch-------h
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-------------DY-------D   62 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-------------d~-------~   62 (314)
                      |.|-+|..+++.+...|.+|+++++++......         .+  .+..++..|..             +.       +
T Consensus       179 GaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~---------~~--lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  247 (401)
T 1x13_A          179 GAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV---------QS--MGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEME  247 (401)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHH---------HH--TTCEECCC--------CCHHHHHHSHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH---------HH--cCCEEEEecccccccccccchhhccHHHHHHHHH
Confidence            359999999999999999999999987653211         10  13333322221             11       1


Q ss_pred             hHHHhhhcCCccEEEEcCCCC---c--ccHHHHHHhCCCCCcEEEEee
Q 021331           63 FVKSSLSAKGFDVVYDINGRE---A--DEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        63 ~l~~~~~~~~~d~vi~~a~~~---~--~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      .+.+++.  ++|+||.+++..   .  .-+...++.|+....+|.++.
T Consensus       248 ~l~e~~~--~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~  293 (401)
T 1x13_A          248 LFAAQAK--EVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAA  293 (401)
T ss_dssp             HHHHHHH--HCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred             HHHHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcC
Confidence            4667777  899999995331   1  124567888886567776664

>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}

Probab=92.71  E-value=0.11  Score=44.87  Aligned_cols=81  Identities=20%  Similarity=0.153  Sum_probs=55.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|++|++.++......                       +.....++++++.  ++|+|+.+...
T Consensus       126 GlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~-----------------------~~~~~~sl~ell~--~aDiV~l~~Pl  180 (381)
T 3oet_A          126 GVGNVGSRLQTRLEALGIRTLLCDPPRAARG-----------------------DEGDFRTLDELVQ--EADVLTFHTPL  180 (381)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECHHHHHTT-----------------------CCSCBCCHHHHHH--HCSEEEECCCC
T ss_pred             eECHHHHHHHHHHHHCCCEEEEECCChHHhc-----------------------cCcccCCHHHHHh--hCCEEEEcCcC
Confidence            5799999999999999999999987543310                       0112345778887  89999877654


Q ss_pred             Ccc--------cHHHHHHhCCCCCcEEEEeecee
Q 021331           83 EAD--------EVEPILDALPNLEQFIYCSSAGV  108 (314)
Q Consensus        83 ~~~--------~~~~~~~~~~~~~~~i~~Ss~~v  108 (314)
                      +..        -....+..|+...-+|.+|...+
T Consensus       181 t~~g~~~T~~li~~~~l~~mk~gailIN~aRG~v  214 (381)
T 3oet_A          181 YKDGPYKTLHLADETLIRRLKPGAILINACRGPV  214 (381)
T ss_dssp             CCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGG
T ss_pred             CccccccchhhcCHHHHhcCCCCcEEEECCCCcc
Confidence            322        12456777776666777666444

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=92.67  E-value=0.19  Score=43.29  Aligned_cols=95  Identities=14%  Similarity=0.141  Sum_probs=55.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCC---h---hhHHHhh--hcCC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---Y---DFVKSSL--SAKG   72 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d---~---~~l~~~~--~~~~   72 (314)
                      +||+|.+|...++.+...|.+|++++++.++.....     ....+  -+...+ .|..+   .   +.+.++.  ...+
T Consensus       174 ~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~-----~~~~~--lGa~~v-i~~~~~~~~~~~~~i~~~t~~~~~g  245 (364)
T 1gu7_A          174 NGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVV-----ASLKE--LGATQV-ITEDQNNSREFGPTIKEWIKQSGGE  245 (364)
T ss_dssp             SCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHH-----HHHHH--HTCSEE-EEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred             CCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHH-----HHHHh--cCCeEE-EecCccchHHHHHHHHHHhhccCCC
Confidence            588999999999999888999999987654300000     00011  122211 23322   1   2333333  2237


Q ss_pred             ccEEEEcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           73 FDVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        73 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +|+||++.|...  ....++.++...+++.++.
T Consensus       246 ~Dvvid~~G~~~--~~~~~~~l~~~G~~v~~g~  276 (364)
T 1gu7_A          246 AKLALNCVGGKS--STGIARKLNNNGLMLTYGG  276 (364)
T ss_dssp             EEEEEESSCHHH--HHHHHHTSCTTCEEEECCC
T ss_pred             ceEEEECCCchh--HHHHHHHhccCCEEEEecC
Confidence            999999998432  2355677775568886553

>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A

Probab=92.66  E-value=0.17  Score=37.11  Aligned_cols=26  Identities=19%  Similarity=0.278  Sum_probs=21.7

Q ss_pred             Ccc---cccHHHHHHHHHHCCCeEEEEEc
Q 021331            2 GGT---RFIGVFLSRLLVKEGHQVTLFTR   27 (314)
Q Consensus         2 Gat---G~iG~~l~~~L~~~g~~V~~~~r   27 (314)
                      |+|   |.+|..+++.|.+.||+|+.+..
T Consensus        20 Gas~~~g~~G~~~~~~l~~~G~~v~~vnp   48 (140)
T 1iuk_A           20 GAHKDPSRPAHYVPRYLREQGYRVLPVNP   48 (140)
T ss_dssp             TCCSSTTSHHHHHHHHHHHTTCEEEEECG
T ss_pred             CCCCCCCChHHHHHHHHHHCCCEEEEeCC
Confidence            776   88999999999999998666543

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=92.58  E-value=0.14  Score=43.75  Aligned_cols=89  Identities=15%  Similarity=0.103  Sum_probs=56.5

Q ss_pred             CCcccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChh---hHHHhhhcCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~l~~~~~~~~~d~v   76 (314)
                      +|+ |.+|..+++.+...|. +|+++++++++... ...          . .. ...|..+.+   .+.++. ..++|+|
T Consensus       171 ~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~-~~~----------l-a~-~v~~~~~~~~~~~~~~~~-~~g~D~v  235 (343)
T 2dq4_A          171 TGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAF-ARP----------Y-AD-RLVNPLEEDLLEVVRRVT-GSGVEVL  235 (343)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGG-GTT----------T-CS-EEECTTTSCHHHHHHHHH-SSCEEEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHH----------h-HH-hccCcCccCHHHHHHHhc-CCCCCEE
Confidence            478 9999999999999998 99999988665321 110          1 11 123554432   222222 3479999


Q ss_pred             EEcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        77 i~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      |+++|. .......++.++...+++.++.
T Consensus       236 id~~g~-~~~~~~~~~~l~~~G~iv~~g~  263 (343)
T 2dq4_A          236 LEFSGN-EAAIHQGLMALIPGGEARILGI  263 (343)
T ss_dssp             EECSCC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred             EECCCC-HHHHHHHHHHHhcCCEEEEEec
Confidence            999984 2334556677774457776654

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=92.58  E-value=0.62  Score=40.42  Aligned_cols=62  Identities=15%  Similarity=0.142  Sum_probs=46.7

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      |.|.+|..+++.+.+.|++|++++..+........             -..+..|+.|.+.+.++.+  .+|+|...
T Consensus        21 G~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~a-------------d~~~~~~~~d~~~l~~~~~--~~dvI~~~   82 (389)
T 3q2o_A           21 GGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVA-------------DIEIVASYDDLKAIQHLAE--ISDVVTYE   82 (389)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTC-------------SEEEECCTTCHHHHHHHHH--TCSEEEES
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhC-------------CceEecCcCCHHHHHHHHH--hCCEeeec
Confidence            45889999999999999999999876543222221             1345678999999999998  78988543

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=92.51  E-value=0.041  Score=46.63  Aligned_cols=27  Identities=7%  Similarity=-0.068  Sum_probs=25.2

Q ss_pred             cccccHHHHHHHHHHCC-CeEEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGK   29 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~~~r~~   29 (314)
                      |.|.+|..+++.|.+.| ++|++.+|++
T Consensus        31 G~G~mG~~lA~~L~~~G~~~V~~~dr~~   58 (317)
T 4ezb_A           31 GFGEAAQSIAGGLGGRNAARLAAYDLRF   58 (317)
T ss_dssp             CCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred             CccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence            47999999999999999 9999999986

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=92.49  E-value=0.075  Score=45.81  Aligned_cols=87  Identities=10%  Similarity=0.077  Sum_probs=46.8

Q ss_pred             CCcccccHHHHHHHHHHCCC---eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      .||||++|..|++.|.++++   ++..+....+. .+.+.          ..+.....-++ +++    .++  ++|+||
T Consensus         8 vGATG~vG~eLlrlL~~~~~p~~el~~~as~~sa-G~~~~----------~~~~~~~~~~~-~~~----~~~--~~Dvvf   69 (366)
T 3pwk_A            8 VGATGAVGAQMIKMLEESTLPIDKIRYLASARSA-GKSLK----------FKDQDITIEET-TET----AFE--GVDIAL   69 (366)
T ss_dssp             ETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTT-TCEEE----------ETTEEEEEEEC-CTT----TTT--TCSEEE
T ss_pred             ECCCChHHHHHHHHHhcCCCCcEEEEEEEccccC-CCcce----------ecCCCceEeeC-CHH----Hhc--CCCEEE
Confidence            49999999999999888765   34444433222 00010          01112222222 122    245  899999


Q ss_pred             EcCCCCcccHHHHHHhCC-CCCcEEEEeece
Q 021331           78 DINGREADEVEPILDALP-NLEQFIYCSSAG  107 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss~~  107 (314)
                      .+.+..  ........+. ...++|=.|+..
T Consensus        70 ~a~~~~--~s~~~a~~~~~~G~~vIDlSa~~   98 (366)
T 3pwk_A           70 FSAGSS--TSAKYAPYAVKAGVVVVDNTSYF   98 (366)
T ss_dssp             ECSCHH--HHHHHHHHHHHTTCEEEECSSTT
T ss_pred             ECCChH--hHHHHHHHHHHCCCEEEEcCCcc
Confidence            998732  2333333332 334677777754

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=92.47  E-value=0.088  Score=46.08  Aligned_cols=90  Identities=14%  Similarity=0.051  Sum_probs=57.2

Q ss_pred             CcccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh----hhHHHhhhcCCccEE
Q 021331            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY----DFVKSSLSAKGFDVV   76 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~----~~l~~~~~~~~~d~v   76 (314)
                      |+ |.+|...++.+...|. +|+++++++++.....           .-+...  .|..+.    +.+.++....++|+|
T Consensus       193 Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-----------~lGa~~--i~~~~~~~~~~~~~~~~~g~g~Dvv  258 (398)
T 2dph_A          193 GA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS-----------DAGFET--IDLRNSAPLRDQIDQILGKPEVDCG  258 (398)
T ss_dssp             CC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-----------TTTCEE--EETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred             CC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-----------HcCCcE--EcCCCcchHHHHHHHHhCCCCCCEE
Confidence            65 9999999998888898 8999998876532111           123442  455443    334444433369999


Q ss_pred             EEcCCCCc-------------ccHHHHHHhCCCCCcEEEEee
Q 021331           77 YDINGREA-------------DEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        77 i~~a~~~~-------------~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      |+++|...             ......++.++...+++.++.
T Consensus       259 id~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~  300 (398)
T 2dph_A          259 VDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI  300 (398)
T ss_dssp             EECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred             EECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence            99998643             134566677764457775543

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=92.44  E-value=0.17  Score=42.36  Aligned_cols=30  Identities=13%  Similarity=0.045  Sum_probs=27.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~   32 (314)
                      |.|.+|..+++.|.+.|++|++.+|+++..
T Consensus        14 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~   43 (303)
T 3g0o_A           14 GLGSMGMGAARSCLRAGLSTWGADLNPQAC   43 (303)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            579999999999999999999999987653

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=92.37  E-value=0.14  Score=43.17  Aligned_cols=82  Identities=15%  Similarity=0.033  Sum_probs=54.6

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|+.+++.|...|++|++.+|+.+...  ..          ..++..     .   ++.+++.  ++|+|+.+...
T Consensus       149 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~--~~----------~~g~~~-----~---~l~ell~--~aDvVvl~~P~  206 (313)
T 2ekl_A          149 GFGRIGTKVGIIANAMGMKVLAYDILDIREK--AE----------KINAKA-----V---SLEELLK--NSDVISLHVTV  206 (313)
T ss_dssp             SCSHHHHHHHHHHHHTTCEEEEECSSCCHHH--HH----------HTTCEE-----C---CHHHHHH--HCSEEEECCCC
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEECCCcchhH--HH----------hcCcee-----c---CHHHHHh--hCCEEEEeccC
Confidence            5699999999999999999999998875421  00          123321     1   3567777  89999987654


Q ss_pred             Ccc--c--HHHHHHhCCCCCcEEEEeec
Q 021331           83 EAD--E--VEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        83 ~~~--~--~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      ...  +  ....+..++....+|.+|+.
T Consensus       207 ~~~t~~li~~~~l~~mk~ga~lIn~arg  234 (313)
T 2ekl_A          207 SKDAKPIIDYPQFELMKDNVIIVNTSRA  234 (313)
T ss_dssp             CTTSCCSBCHHHHHHSCTTEEEEESSCG
T ss_pred             ChHHHHhhCHHHHhcCCCCCEEEECCCC
Confidence            321  1  14566777755567766663

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=92.37  E-value=0.026  Score=50.73  Aligned_cols=30  Identities=27%  Similarity=0.395  Sum_probs=27.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~   32 (314)
                      |+|++|..++..|.+.|++|++++++++..
T Consensus        15 G~G~vG~~lA~~la~~G~~V~~~d~~~~~v   44 (478)
T 2y0c_A           15 GSGSVGLVTGACLADIGHDVFCLDVDQAKI   44 (478)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CcCHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            679999999999999999999999987653

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=92.35  E-value=0.058  Score=46.28  Aligned_cols=83  Identities=16%  Similarity=0.183  Sum_probs=54.1

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |+ |.+|...++.+...|.+|+++++++++....         .+  -+...+.   .+++.+.   +  ++|+||++.|
T Consensus       184 Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~---------~~--lGa~~v~---~~~~~~~---~--~~D~vid~~g  243 (348)
T 3two_A          184 GF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA---------LS--MGVKHFY---TDPKQCK---E--ELDFIISTIP  243 (348)
T ss_dssp             SC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH---------HH--TTCSEEE---SSGGGCC---S--CEEEEEECCC
T ss_pred             CC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH---------Hh--cCCCeec---CCHHHHh---c--CCCEEEECCC
Confidence            65 9999999999999999999999887664211         11  1222222   3443322   2  8999999988


Q ss_pred             CCcccHHHHHHhCCCCCcEEEEee
Q 021331           82 READEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      .. ......++.++...+++.++.
T Consensus       244 ~~-~~~~~~~~~l~~~G~iv~~G~  266 (348)
T 3two_A          244 TH-YDLKDYLKLLTYNGDLALVGL  266 (348)
T ss_dssp             SC-CCHHHHHTTEEEEEEEEECCC
T ss_pred             cH-HHHHHHHHHHhcCCEEEEECC
Confidence            54 234556666665557776543

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=92.32  E-value=0.26  Score=38.81  Aligned_cols=27  Identities=22%  Similarity=0.373  Sum_probs=24.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGK   29 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~   29 (314)
                      |+|.+|..++..|.+.|++|++.+|++
T Consensus        26 G~G~mG~~la~~l~~~g~~V~~~~~~~   52 (209)
T 2raf_A           26 GKGNMGQAIGHNFEIAGHEVTYYGSKD   52 (209)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            479999999999999999999988763

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=92.26  E-value=0.1  Score=45.90  Aligned_cols=82  Identities=12%  Similarity=0.028  Sum_probs=55.5

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|.+|++.++++.......           ..++.++        .+++++.  +.|+|+.+.+.
T Consensus       254 G~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~-----------~~G~~vv--------~LeElL~--~ADIVv~atgt  312 (464)
T 3n58_A          254 GYGDVGKGSAQSLAGAGARVKVTEVDPICALQAA-----------MDGFEVV--------TLDDAAS--TADIVVTTTGN  312 (464)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH-----------HTTCEEC--------CHHHHGG--GCSEEEECCSS
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH-----------hcCceec--------cHHHHHh--hCCEEEECCCC
Confidence            5699999999999999999999988664311000           1233221        2567787  89999988765


Q ss_pred             CcccHHHHHHhCCCCCcEEEEee
Q 021331           83 EADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ...-....+..|+....+|.++-
T Consensus       313 ~~lI~~e~l~~MK~GAILINvGR  335 (464)
T 3n58_A          313 KDVITIDHMRKMKDMCIVGNIGH  335 (464)
T ss_dssp             SSSBCHHHHHHSCTTEEEEECSS
T ss_pred             ccccCHHHHhcCCCCeEEEEcCC
Confidence            44445677888886666665543

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=92.24  E-value=0.078  Score=45.63  Aligned_cols=88  Identities=15%  Similarity=0.160  Sum_probs=56.6

Q ss_pred             CCcccccHHHH-HHHH-HHCCCe-EEEEEcCCc---ccccCCCCCCchhhhhccCceEEEEecCCChh--hHHHhhhcCC
Q 021331            1 MGGTRFIGVFL-SRLL-VKEGHQ-VTLFTRGKA---PIAQQLPGESDQEFAEFSSKILHLKGDRKDYD--FVKSSLSAKG   72 (314)
Q Consensus         1 tGatG~iG~~l-~~~L-~~~g~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~--~l~~~~~~~~   72 (314)
                      +|+ |.+|... ++.+ ...|.+ |++++++++   +... +.          .-+...+  |..+.+  .+.++ .. +
T Consensus       179 ~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~-~~----------~lGa~~v--~~~~~~~~~i~~~-~g-g  242 (357)
T 2b5w_A          179 LGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDI-IE----------ELDATYV--DSRQTPVEDVPDV-YE-Q  242 (357)
T ss_dssp             ECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHH-HH----------HTTCEEE--ETTTSCGGGHHHH-SC-C
T ss_pred             ECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHH-HH----------HcCCccc--CCCccCHHHHHHh-CC-C
Confidence            477 9999999 8887 777987 999999876   4221 11          1344444  665432  14444 33 7


Q ss_pred             ccEEEEcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           73 FDVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        73 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +|+||+++|.. ......++.++...+++.++.
T Consensus       243 ~Dvvid~~g~~-~~~~~~~~~l~~~G~iv~~g~  274 (357)
T 2b5w_A          243 MDFIYEATGFP-KHAIQSVQALAPNGVGALLGV  274 (357)
T ss_dssp             EEEEEECSCCH-HHHHHHHHHEEEEEEEEECCC
T ss_pred             CCEEEECCCCh-HHHHHHHHHHhcCCEEEEEeC
Confidence            99999999852 234556666664457776654

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=92.14  E-value=0.33  Score=44.52  Aligned_cols=65  Identities=14%  Similarity=0.171  Sum_probs=52.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|-+|..+++.|.+.|++|++++++++....              . ..++.+|.+|++.++++= -.++|.+|-+.+.
T Consensus       355 G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~--------------~-~~~i~gD~t~~~~L~~ag-i~~ad~vi~~~~~  418 (565)
T 4gx0_A          355 GHGRIGCAAAAFLDRKPVPFILIDRQESPVCN--------------D-HVVVYGDATVGQTLRQAG-IDRASGIIVTTND  418 (565)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESSCCSSCC--------------S-SCEEESCSSSSTHHHHHT-TTSCSEEEECCSC
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECChHHHhh--------------c-CCEEEeCCCCHHHHHhcC-ccccCEEEEECCC
Confidence            44999999999999999999999999876431              1 278999999999888753 3479999977765


Q ss_pred             C
Q 021331           83 E   83 (314)
Q Consensus        83 ~   83 (314)
                      .
T Consensus       419 d  419 (565)
T 4gx0_A          419 D  419 (565)
T ss_dssp             H
T ss_pred             c
Confidence            3

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=92.06  E-value=0.01  Score=50.85  Aligned_cols=70  Identities=11%  Similarity=0.123  Sum_probs=43.1

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecCCChhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi   77 (314)
                      +|++|++|+.++..|+..|  .+|++++.+..+......     .+.+. ....     ++.-..+..++++  ++|+||
T Consensus        14 iGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~-----DL~~~~~~~~-----~i~~t~d~~~al~--dADvVv   81 (343)
T 3fi9_A           14 VGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAE-----EIRHCGFEGL-----NLTFTSDIKEALT--DAKYIV   81 (343)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHH-----HHHHHCCTTC-----CCEEESCHHHHHT--TEEEEE
T ss_pred             ECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHH-----hhhhCcCCCC-----ceEEcCCHHHHhC--CCCEEE
Confidence            4888999999999999998  589999987543211000     01100 0101     1111123556777  999999


Q ss_pred             EcCCC
Q 021331           78 DINGR   82 (314)
Q Consensus        78 ~~a~~   82 (314)
                      .++|.
T Consensus        82 itaG~   86 (343)
T 3fi9_A           82 SSGGA   86 (343)
T ss_dssp             ECCC-
T ss_pred             EccCC
Confidence            99986

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=92.05  E-value=0.22  Score=43.56  Aligned_cols=62  Identities=23%  Similarity=0.249  Sum_probs=46.7

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      |.|.+|..+++.+.+.|++|++++ .+......+.           .....+.+|+.|.+.+.++.+  .+|+|+.
T Consensus        31 GgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~a-----------d~~~~~~~~~~d~~~l~~~a~--~~d~i~~   92 (403)
T 3k5i_A           31 GGGQLGRMLVESANRLNIQVNVLD-ADNSPAKQIS-----------AHDGHVTGSFKEREAVRQLAK--TCDVVTA   92 (403)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGC-----------CSSCCEESCTTCHHHHHHHHT--TCSEEEE
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhc-----------cccceeecCCCCHHHHHHHHH--hCCEEEE
Confidence            358999999999999999999999 5433222221           122456789999999999988  7888764

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=92.02  E-value=0.16  Score=43.28  Aligned_cols=81  Identities=14%  Similarity=0.049  Sum_probs=53.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|+.+++.|...|++|++.+|+... .. ..          ..++.     ..   ++.+++.  ++|+|+.+...
T Consensus       157 G~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~-~~----------~~g~~-----~~---~l~~~l~--~aDvVil~vp~  214 (334)
T 2dbq_A          157 GLGRIGQAIAKRAKGFNMRILYYSRTRKE-EV-ER----------ELNAE-----FK---PLEDLLR--ESDFVVLAVPL  214 (334)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCH-HH-HH----------HHCCE-----EC---CHHHHHH--HCSEEEECCCC
T ss_pred             ccCHHHHHHHHHHHhCCCEEEEECCCcch-hh-Hh----------hcCcc-----cC---CHHHHHh--hCCEEEECCCC
Confidence            46999999999999999999999987654 10 00          01221     11   3566777  89999988765


Q ss_pred             Ccc--c--HHHHHHhCCCCCcEEEEee
Q 021331           83 EAD--E--VEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        83 ~~~--~--~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ...  +  ...++..++....+|.+|+
T Consensus       215 ~~~t~~~i~~~~~~~mk~~ailIn~sr  241 (334)
T 2dbq_A          215 TRETYHLINEERLKLMKKTAILINIAR  241 (334)
T ss_dssp             CTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             ChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence            431  1  1356666775555665554

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=92.02  E-value=0.13  Score=45.14  Aligned_cols=82  Identities=15%  Similarity=0.018  Sum_probs=55.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|..+++.|...|.+|+++++++.......           ..++.+        ..+.+++.  +.|+|+.+.+.
T Consensus       227 G~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~-----------~~G~~v--------~~Leeal~--~ADIVi~atgt  285 (435)
T 3gvp_A          227 GYGEVGKGCCAALKAMGSIVYVTEIDPICALQAC-----------MDGFRL--------VKLNEVIR--QVDIVITCTGN  285 (435)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTCEE--------CCHHHHTT--TCSEEEECSSC
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH-----------HcCCEe--------ccHHHHHh--cCCEEEECCCC
Confidence            5699999999999999999999988764311000           122221        13677887  89999998664


Q ss_pred             CcccHHHHHHhCCCCCcEEEEee
Q 021331           83 EADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ...-....++.|+....+|.++.
T Consensus       286 ~~lI~~e~l~~MK~gailINvgr  308 (435)
T 3gvp_A          286 KNVVTREHLDRMKNSCIVCNMGH  308 (435)
T ss_dssp             SCSBCHHHHHHSCTTEEEEECSS
T ss_pred             cccCCHHHHHhcCCCcEEEEecC
Confidence            44444567788885555665543

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=91.95  E-value=0.21  Score=43.17  Aligned_cols=90  Identities=11%  Similarity=0.096  Sum_probs=55.9

Q ss_pred             CCcccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCC--h---hhHHHhhhcCCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--Y---DFVKSSLSAKGFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~---~~l~~~~~~~~~d   74 (314)
                      +| +|.+|...++.+...|. +|+++++++++....         .+  -+... ..|..+  .   +.+.++... ++|
T Consensus       202 ~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a---------~~--lGa~~-vi~~~~~~~~~~~~v~~~~~~-g~D  267 (376)
T 1e3i_A          202 FG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKA---------KA--LGATD-CLNPRELDKPVQDVITELTAG-GVD  267 (376)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH---------HH--TTCSE-EECGGGCSSCHHHHHHHHHTS-CBS
T ss_pred             EC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH---------HH--hCCcE-EEccccccchHHHHHHHHhCC-Ccc
Confidence            36 49999999999998998 899998877653211         01  12222 134442  1   223333322 799


Q ss_pred             EEEEcCCCCcccHHHHHHhCCCC-CcEEEEee
Q 021331           75 VVYDINGREADEVEPILDALPNL-EQFIYCSS  105 (314)
Q Consensus        75 ~vi~~a~~~~~~~~~~~~~~~~~-~~~i~~Ss  105 (314)
                      +||+++|. .......++.++.. .+++.++.
T Consensus       268 vvid~~G~-~~~~~~~~~~l~~~~G~iv~~G~  298 (376)
T 1e3i_A          268 YSLDCAGT-AQTLKAAVDCTVLGWGSCTVVGA  298 (376)
T ss_dssp             EEEESSCC-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred             EEEECCCC-HHHHHHHHHHhhcCCCEEEEECC
Confidence            99999984 23345667777755 68886654

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=91.94  E-value=0.22  Score=43.06  Aligned_cols=90  Identities=9%  Similarity=0.053  Sum_probs=55.9

Q ss_pred             CCcccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCC--h---hhHHHhhhcCCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--Y---DFVKSSLSAKGFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~---~~l~~~~~~~~~d   74 (314)
                      +| +|.+|...++.+...|. +|+++++++.+... .        .+  .+...+ .|..+  .   +.+.++.. -++|
T Consensus       199 ~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~-~--------~~--lGa~~v-i~~~~~~~~~~~~~~~~~~-~g~D  264 (374)
T 1cdo_A          199 FG-LGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEK-A--------KV--FGATDF-VNPNDHSEPISQVLSKMTN-GGVD  264 (374)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-H--------HH--TTCCEE-ECGGGCSSCHHHHHHHHHT-SCBS
T ss_pred             EC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH-H--------HH--hCCceE-EeccccchhHHHHHHHHhC-CCCC
Confidence            36 49999999999999998 89999887765321 1        00  122222 34443  1   22333332 2799


Q ss_pred             EEEEcCCCCcccHHHHHHhCCCC-CcEEEEee
Q 021331           75 VVYDINGREADEVEPILDALPNL-EQFIYCSS  105 (314)
Q Consensus        75 ~vi~~a~~~~~~~~~~~~~~~~~-~~~i~~Ss  105 (314)
                      +||+++|. .......++.++.. .+++.++.
T Consensus       265 ~vid~~g~-~~~~~~~~~~l~~~~G~iv~~G~  295 (374)
T 1cdo_A          265 FSLECVGN-VGVMRNALESCLKGWGVSVLVGW  295 (374)
T ss_dssp             EEEECSCC-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred             EEEECCCC-HHHHHHHHHHhhcCCcEEEEEcC
Confidence            99999884 22345667777755 68886654

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=91.90  E-value=0.1  Score=43.88  Aligned_cols=60  Identities=20%  Similarity=0.296  Sum_probs=41.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|..+++.|.+.|++|++.+|+++.......           .++..       ..++.++++  ++|+||-+...
T Consensus        16 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g~~~-------~~~~~e~~~--~aDvVi~~vp~   75 (306)
T 3l6d_A           16 GLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVA-----------AGAHL-------CESVKAALS--ASPATIFVLLD   75 (306)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH-----------HTCEE-------CSSHHHHHH--HSSEEEECCSS
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------CCCee-------cCCHHHHHh--cCCEEEEEeCC
Confidence            57999999999999999999999998765321110           12211       123456666  68888877653

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=91.90  E-value=0.038  Score=46.33  Aligned_cols=68  Identities=9%  Similarity=0.037  Sum_probs=43.8

Q ss_pred             CcccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |+ |.+|++++..|.+.|. +|++.+|+.++......        .+.....    +..+.+++.+.+.  ++|+||++.
T Consensus       148 Ga-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~--------~~~~~~~----~~~~~~~~~~~~~--~aDivIn~t  212 (297)
T 2egg_A          148 GA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVR--------EGDERRS----AYFSLAEAETRLA--EYDIIINTT  212 (297)
T ss_dssp             CC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHH--------HSCSSSC----CEECHHHHHHTGG--GCSEEEECS
T ss_pred             Cc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH--------HhhhccC----ceeeHHHHHhhhc--cCCEEEECC
Confidence            54 8899999999999997 99999998755321110        0001000    1112345666776  899999998


Q ss_pred             CCCc
Q 021331           81 GREA   84 (314)
Q Consensus        81 ~~~~   84 (314)
                      +...
T Consensus       213 ~~~~  216 (297)
T 2egg_A          213 SVGM  216 (297)
T ss_dssp             CTTC
T ss_pred             CCCC
Confidence            7543

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=91.89  E-value=0.12  Score=43.18  Aligned_cols=60  Identities=20%  Similarity=0.246  Sum_probs=40.9

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|..+++.|.+.|++|++.+|+++.......           .++..    .   .++.+++.  ++|+||.+...
T Consensus        12 G~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g~~~----~---~~~~~~~~--~~D~vi~~v~~   71 (299)
T 1vpd_A           12 GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-----------AGAET----A---STAKAIAE--QCDVIITMLPN   71 (299)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TTCEE----C---SSHHHHHH--HCSEEEECCSS
T ss_pred             CchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----------CCCee----c---CCHHHHHh--CCCEEEEECCC
Confidence            47999999999999999999999988655321110           12221    1   22445566  79999988763

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=91.87  E-value=0.094  Score=45.02  Aligned_cols=85  Identities=14%  Similarity=0.046  Sum_probs=56.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|++|++.+|+..... ..           ..++..       .+++.+++.  ++|+|+.+...
T Consensus       167 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~-----------~~g~~~-------~~~l~ell~--~aDiV~l~~Pl  225 (352)
T 3gg9_A          167 GYGKIGQLVAGYGRAFGMNVLVWGRENSKER-AR-----------ADGFAV-------AESKDALFE--QSDVLSVHLRL  225 (352)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSHHHHHH-HH-----------HTTCEE-------CSSHHHHHH--HCSEEEECCCC
T ss_pred             eECHHHHHHHHHHHhCCCEEEEECCCCCHHH-HH-----------hcCceE-------eCCHHHHHh--hCCEEEEeccC
Confidence            5699999999999999999999998753210 00           123321       134677888  89999877654


Q ss_pred             Cc--c--cHHHHHHhCCCCCcEEEEeecee
Q 021331           83 EA--D--EVEPILDALPNLEQFIYCSSAGV  108 (314)
Q Consensus        83 ~~--~--~~~~~~~~~~~~~~~i~~Ss~~v  108 (314)
                      +.  .  -....+..++....||.+|...+
T Consensus       226 t~~t~~li~~~~l~~mk~gailIN~aRg~~  255 (352)
T 3gg9_A          226 NDETRSIITVADLTRMKPTALFVNTSRAEL  255 (352)
T ss_dssp             STTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred             cHHHHHhhCHHHHhhCCCCcEEEECCCchh
Confidence            32  1  12456667776667887776444

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=91.85  E-value=0.049  Score=48.82  Aligned_cols=30  Identities=17%  Similarity=0.289  Sum_probs=26.6

Q ss_pred             cccccHHHHHHHHHHC--CCeEEEEEcCCccc
Q 021331            3 GTRFIGVFLSRLLVKE--GHQVTLFTRGKAPI   32 (314)
Q Consensus         3 atG~iG~~l~~~L~~~--g~~V~~~~r~~~~~   32 (314)
                      |+|++|..++..|.+.  |++|++++|+++..
T Consensus        12 G~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~   43 (467)
T 2q3e_A           12 GAGYVGGPTCSVIAHMCPEIRVTVVDVNESRI   43 (467)
T ss_dssp             CCSTTHHHHHHHHHHHCTTSEEEEECSCHHHH
T ss_pred             CCCHHHHHHHHHHHhcCCCCEEEEEECCHHHH
Confidence            5799999999999999  89999999987653

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=91.85  E-value=0.08  Score=43.24  Aligned_cols=72  Identities=11%  Similarity=-0.002  Sum_probs=47.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |+|.+|..+++.|.+.|++|.+.+|+++.......         . .++.       ...+..+++.  ++|+||-+.. 
T Consensus        10 G~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~---------~-~g~~-------~~~~~~~~~~--~~D~Vi~~v~-   69 (259)
T 2ahr_A           10 GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAE---------Q-LALP-------YAMSHQDLID--QVDLVILGIK-   69 (259)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHH---------H-HTCC-------BCSSHHHHHH--TCSEEEECSC-
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHH---------H-cCCE-------eeCCHHHHHh--cCCEEEEEeC-
Confidence            47999999999999999999999888655321100         0 0111       1123456666  8999998876 


Q ss_pred             CcccHHHHHHhCC
Q 021331           83 EADEVEPILDALP   95 (314)
Q Consensus        83 ~~~~~~~~~~~~~   95 (314)
                       ......++..+.
T Consensus        70 -~~~~~~v~~~l~   81 (259)
T 2ahr_A           70 -PQLFETVLKPLH   81 (259)
T ss_dssp             -GGGHHHHHTTSC
T ss_pred             -cHhHHHHHHHhc
Confidence             344556666555

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=91.80  E-value=0.052  Score=45.63  Aligned_cols=29  Identities=31%  Similarity=0.393  Sum_probs=25.9

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |.|.+|..++..|.+.|++|++++|+++.
T Consensus        10 G~G~~G~~~a~~l~~~g~~V~~~~r~~~~   38 (316)
T 2ew2_A           10 GAGAMGSRLGIMLHQGGNDVTLIDQWPAH   38 (316)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CcCHHHHHHHHHHHhCCCcEEEEECCHHH
Confidence            45999999999999999999999998654

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=91.80  E-value=0.07  Score=45.02  Aligned_cols=61  Identities=10%  Similarity=0.079  Sum_probs=40.8

Q ss_pred             cccccHHHHHHHHHHCCC-eEEEEEcCC--cccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGK--APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      |.|.+|..+++.|.+.|+ +|++.+|++  +... .+.          ..++..       ..+..+++.  ++|+||-+
T Consensus        31 G~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~-~~~----------~~g~~~-------~~~~~e~~~--~aDvVi~~   90 (312)
T 3qsg_A           31 GFGEAASAIASGLRQAGAIDMAAYDAASAESWRP-RAE----------ELGVSC-------KASVAEVAG--ECDVIFSL   90 (312)
T ss_dssp             CCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHH-HHH----------HTTCEE-------CSCHHHHHH--HCSEEEEC
T ss_pred             CccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHH-HHH----------HCCCEE-------eCCHHHHHh--cCCEEEEe
Confidence            569999999999999999 999999974  3211 110          012221       123455666  78999988


Q ss_pred             CCCC
Q 021331           80 NGRE   83 (314)
Q Consensus        80 a~~~   83 (314)
                      ....
T Consensus        91 vp~~   94 (312)
T 3qsg_A           91 VTAQ   94 (312)
T ss_dssp             SCTT
T ss_pred             cCch
Confidence            7654

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=91.79  E-value=0.038  Score=47.33  Aligned_cols=91  Identities=15%  Similarity=0.122  Sum_probs=56.3

Q ss_pred             CCcccccHHHHHHHHHHC--CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCC-hhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~l~~~~~~~~~d~vi   77 (314)
                      +|+ |.+|...++.+...  |.+|+++++++++... .        .+  .+...+ .|..+ .+.+.++-...++|+||
T Consensus       177 ~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~-~--------~~--lGa~~v-i~~~~~~~~~~~~~~g~g~D~vi  243 (344)
T 2h6e_A          177 NGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDF-A--------LE--LGADYV-SEMKDAESLINKLTDGLGASIAI  243 (344)
T ss_dssp             ECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHH-H--------HH--HTCSEE-ECHHHHHHHHHHHHTTCCEEEEE
T ss_pred             ECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHH-H--------HH--hCCCEE-eccccchHHHHHhhcCCCccEEE
Confidence            477 99999999999998  9999999987655321 1        11  122211 24433 33344433323699999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +++|.. ......++.++...+++.++.
T Consensus       244 d~~g~~-~~~~~~~~~l~~~G~iv~~g~  270 (344)
T 2h6e_A          244 DLVGTE-ETTYNLGKLLAQEGAIILVGM  270 (344)
T ss_dssp             ESSCCH-HHHHHHHHHEEEEEEEEECCC
T ss_pred             ECCCCh-HHHHHHHHHhhcCCEEEEeCC
Confidence            999852 234556666664457776554

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=91.74  E-value=0.14  Score=43.87  Aligned_cols=84  Identities=13%  Similarity=0.018  Sum_probs=53.6

Q ss_pred             cccccHHHHHHHHH-HCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLV-KEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |.|.||+.+++.|. ..|++|++.+|+........           ..++.+  .     .++.+++.  ++|+|+.+..
T Consensus       170 G~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~-----------~~g~~~--~-----~~l~ell~--~aDvVil~vp  229 (348)
T 2w2k_A          170 GLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEK-----------ALGAER--V-----DSLEELAR--RSDCVSVSVP  229 (348)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-----------HHTCEE--C-----SSHHHHHH--HCSEEEECCC
T ss_pred             EECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHh-----------hcCcEE--e-----CCHHHHhc--cCCEEEEeCC
Confidence            56999999999999 88999999998765421100           012221  1     13566777  8999998876


Q ss_pred             CCcc--c--HHHHHHhCCCCCcEEEEeec
Q 021331           82 READ--E--VEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        82 ~~~~--~--~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      .+..  +  ...++..++....+|.+|+.
T Consensus       230 ~~~~t~~li~~~~l~~mk~gailin~srg  258 (348)
T 2w2k_A          230 YMKLTHHLIDEAFFAAMKPGSRIVNTARG  258 (348)
T ss_dssp             CSGGGTTCBCHHHHHHSCTTEEEEECSCG
T ss_pred             CChHHHHHhhHHHHhcCCCCCEEEECCCC
Confidence            5421  1  13466667755556655553

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=91.72  E-value=0.15  Score=43.99  Aligned_cols=89  Identities=12%  Similarity=0.111  Sum_probs=54.7

Q ss_pred             CCcccccHHHHHHHHHH-CCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCC--hhhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~l~~~~~~~~~d~vi   77 (314)
                      +||+|.+|...++.+.. .|.+|+++++++++... +        .+  -+...+ .|..+  .+.+.++ ...++|+||
T Consensus       178 ~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~-~--------~~--lGad~v-i~~~~~~~~~v~~~-~~~g~Dvvi  244 (363)
T 4dvj_A          178 VGGAGGVGSIAVQIARQRTDLTVIATASRPETQEW-V--------KS--LGAHHV-IDHSKPLAAEVAAL-GLGAPAFVF  244 (363)
T ss_dssp             ESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHH-H--------HH--TTCSEE-ECTTSCHHHHHHTT-CSCCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH-H--------HH--cCCCEE-EeCCCCHHHHHHHh-cCCCceEEE
Confidence            47899999999988876 58999999987655321 1        11  122222 24433  1222222 223799999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEE
Q 021331           78 DINGREADEVEPILDALPNLEQFIYC  103 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~  103 (314)
                      +++|.. ......++.++...+++.+
T Consensus       245 d~~g~~-~~~~~~~~~l~~~G~iv~~  269 (363)
T 4dvj_A          245 STTHTD-KHAAEIADLIAPQGRFCLI  269 (363)
T ss_dssp             ECSCHH-HHHHHHHHHSCTTCEEEEC
T ss_pred             ECCCch-hhHHHHHHHhcCCCEEEEE
Confidence            998732 2345566777766688865

>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}

Probab=91.64  E-value=0.12  Score=44.70  Aligned_cols=80  Identities=20%  Similarity=0.165  Sum_probs=53.9

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|++|++.++......               .+.        ...++.+++.  ++|+|+.+...
T Consensus       123 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~---------------~g~--------~~~~l~ell~--~aDvV~l~~Pl  177 (380)
T 2o4c_A          123 GAGQVGGRLVEVLRGLGWKVLVCDPPRQARE---------------PDG--------EFVSLERLLA--EADVISLHTPL  177 (380)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECHHHHHHS---------------TTS--------CCCCHHHHHH--HCSEEEECCCC
T ss_pred             eCCHHHHHHHHHHHHCCCEEEEEcCChhhhc---------------cCc--------ccCCHHHHHH--hCCEEEEeccC
Confidence            5799999999999999999999887653310               111        1234677887  89999987654


Q ss_pred             Ccc------c--HHHHHHhCCCCCcEEEEeece
Q 021331           83 EAD------E--VEPILDALPNLEQFIYCSSAG  107 (314)
Q Consensus        83 ~~~------~--~~~~~~~~~~~~~~i~~Ss~~  107 (314)
                      +..      +  ....+..++...-+|.+|+..
T Consensus       178 t~~g~~~T~~li~~~~l~~mk~gailIN~sRG~  210 (380)
T 2o4c_A          178 NRDGEHPTRHLLDEPRLAALRPGTWLVNASRGA  210 (380)
T ss_dssp             CSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGG
T ss_pred             ccccccchhhhcCHHHHhhCCCCcEEEECCCCc
Confidence            332      1  245666777555677666543

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=91.57  E-value=0.28  Score=41.75  Aligned_cols=82  Identities=15%  Similarity=0.078  Sum_probs=54.9

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|++|++.+|+.....   .           ..+     +..  +++.+++.  ++|+|+.+...
T Consensus       153 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~---~-----------~~~-----~~~--~~l~ell~--~aDvV~l~~p~  209 (333)
T 1j4a_A          153 GTGHIGQVFMQIMEGFGAKVITYDIFRNPEL---E-----------KKG-----YYV--DSLDDLYK--QADVISLHVPD  209 (333)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCHHH---H-----------HTT-----CBC--SCHHHHHH--HCSEEEECSCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCcchhH---H-----------hhC-----eec--CCHHHHHh--hCCEEEEcCCC
Confidence            5699999999999999999999998775421   0           001     111  14667777  89999988764


Q ss_pred             Ccc--c--HHHHHHhCCCCCcEEEEeece
Q 021331           83 EAD--E--VEPILDALPNLEQFIYCSSAG  107 (314)
Q Consensus        83 ~~~--~--~~~~~~~~~~~~~~i~~Ss~~  107 (314)
                      ...  +  ....+..++....+|.+|+..
T Consensus       210 ~~~t~~li~~~~l~~mk~ga~lIn~arg~  238 (333)
T 1j4a_A          210 VPANVHMINDESIAKMKQDVVIVNVSRGP  238 (333)
T ss_dssp             CGGGTTCBSHHHHHHSCTTEEEEECSCGG
T ss_pred             cHHHHHHHhHHHHhhCCCCcEEEECCCCc
Confidence            332  1  134566677556677766643

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=91.52  E-value=0.32  Score=42.13  Aligned_cols=90  Identities=10%  Similarity=0.108  Sum_probs=57.0

Q ss_pred             CCcccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCC--C---hhhHHHhhhcCCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--D---YDFVKSSLSAKGFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--d---~~~l~~~~~~~~~d   74 (314)
                      +|+ |.+|...++.+...|. +|+++++++++......           -+... ..|..  +   .+.+.++... ++|
T Consensus       200 ~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~-----------lGa~~-vi~~~~~~~~~~~~i~~~~~g-g~D  265 (378)
T 3uko_A          200 FGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK-----------FGVNE-FVNPKDHDKPIQEVIVDLTDG-GVD  265 (378)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT-----------TTCCE-EECGGGCSSCHHHHHHHHTTS-CBS
T ss_pred             ECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-----------cCCcE-EEccccCchhHHHHHHHhcCC-CCC
Confidence            366 9999999999998898 89999988776431111           22222 23443  2   2233444333 799


Q ss_pred             EEEEcCCCCcccHHHHHHhCCC-CCcEEEEee
Q 021331           75 VVYDINGREADEVEPILDALPN-LEQFIYCSS  105 (314)
Q Consensus        75 ~vi~~a~~~~~~~~~~~~~~~~-~~~~i~~Ss  105 (314)
                      +||+++|. .......++.++. ..+++.++.
T Consensus       266 ~vid~~g~-~~~~~~~~~~l~~g~G~iv~~G~  296 (378)
T 3uko_A          266 YSFECIGN-VSVMRAALECCHKGWGTSVIVGV  296 (378)
T ss_dssp             EEEECSCC-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred             EEEECCCC-HHHHHHHHHHhhccCCEEEEEcc
Confidence            99999884 2334566677775 378887654

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=91.47  E-value=0.21  Score=42.53  Aligned_cols=81  Identities=10%  Similarity=0.003  Sum_probs=54.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|++|++.+|+.....  ..          ..++..        .++.+++.  ++|+|+.+...
T Consensus       172 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~--~~----------~~g~~~--------~~l~ell~--~aDvV~l~~P~  229 (335)
T 2g76_A          172 GLGRIGREVATRMQSFGMKTIGYDPIISPEV--SA----------SFGVQQ--------LPLEEIWP--LCDFITVHTPL  229 (335)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSSCHHH--HH----------HTTCEE--------CCHHHHGG--GCSEEEECCCC
T ss_pred             eECHHHHHHHHHHHHCCCEEEEECCCcchhh--hh----------hcCcee--------CCHHHHHh--cCCEEEEecCC
Confidence            5699999999999999999999998765411  00          022321        14667787  89999987665


Q ss_pred             Ccc--c--HHHHHHhCCCCCcEEEEee
Q 021331           83 EAD--E--VEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        83 ~~~--~--~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +..  +  ....+..++....+|.+|+
T Consensus       230 t~~t~~li~~~~l~~mk~gailIN~ar  256 (335)
T 2g76_A          230 LPSTTGLLNDNTFAQCKKGVRVVNCAR  256 (335)
T ss_dssp             CTTTTTSBCHHHHTTSCTTEEEEECSC
T ss_pred             CHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            321  1  1346666765556777666

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=91.47  E-value=0.87  Score=39.01  Aligned_cols=99  Identities=14%  Similarity=0.135  Sum_probs=56.3

Q ss_pred             cccccHHHHHHHHHHCC-CeEEEEEcCCcc---cccCCCCC-----------CchhhhhccC--ceEEEEecCCChhhHH
Q 021331            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAP---IAQQLPGE-----------SDQEFAEFSS--KILHLKGDRKDYDFVK   65 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~~---~~~~~~~~-----------~~~~~~~~~~--~~~~~~~D~~d~~~l~   65 (314)
                      |.|.+|.++++.|...| -++++++++.-.   ..++.-..           ....+....+  .+..+..++.+...+.
T Consensus       125 G~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i~~~~~~~  204 (353)
T 3h5n_A          125 GCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLH  204 (353)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEECCCCSGGGGG
T ss_pred             CCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeecccCchhhhh
Confidence            45899999999999999 488889877532   11111100           0011222223  3445555665554455


Q ss_pred             HhhhcCCccEEEEcCCCCcccHHHH-HHhCC-CCCcEEEEee
Q 021331           66 SSLSAKGFDVVYDINGREADEVEPI-LDALP-NLEQFIYCSS  105 (314)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~~-~~~~~-~~~~~i~~Ss  105 (314)
                      + ++  ++|+||.+.. +...++.+ -++|. ....+|+.+.
T Consensus       205 ~-~~--~~DlVvd~~D-n~~~~r~~ln~~c~~~~~p~i~~~~  242 (353)
T 3h5n_A          205 K-VP--EADIWVVSAD-HPFNLINWVNKYCVRANQPYINAGY  242 (353)
T ss_dssp             G-SC--CCSEEEECCC-CSTTHHHHHHHHHHHTTCCEEEEEE
T ss_pred             H-hc--cCCEEEEecC-ChHHHHHHHHHHHHHhCCCEEEEEE
Confidence            5 66  8899998764 33324433 34555 4456776543

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=91.47  E-value=0.25  Score=42.67  Aligned_cols=90  Identities=14%  Similarity=0.158  Sum_probs=55.6

Q ss_pred             CCcccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCC--h---hhHHHhhhcCCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--Y---DFVKSSLSAKGFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~---~~l~~~~~~~~~d   74 (314)
                      +| +|.+|..+++.+...|. +|+++++++++....         .+  .+... ..|..+  .   +.+.++.. -++|
T Consensus       198 ~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~---------~~--lGa~~-vi~~~~~~~~~~~~~~~~~~-~g~D  263 (374)
T 2jhf_A          198 FG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKA---------KE--VGATE-CVNPQDYKKPIQEVLTEMSN-GGVD  263 (374)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH---------HH--TTCSE-EECGGGCSSCHHHHHHHHTT-SCBS
T ss_pred             EC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH---------HH--hCCce-EecccccchhHHHHHHHHhC-CCCc
Confidence            36 59999999999999998 899998877653211         00  12222 134443  1   22333322 2799


Q ss_pred             EEEEcCCCCcccHHHHHHhCCCC-CcEEEEee
Q 021331           75 VVYDINGREADEVEPILDALPNL-EQFIYCSS  105 (314)
Q Consensus        75 ~vi~~a~~~~~~~~~~~~~~~~~-~~~i~~Ss  105 (314)
                      +||+++|. .......++.++.. .+++.++.
T Consensus       264 ~vid~~g~-~~~~~~~~~~l~~~~G~iv~~G~  294 (374)
T 2jhf_A          264 FSFEVIGR-LDTMVTALSCCQEAYGVSVIVGV  294 (374)
T ss_dssp             EEEECSCC-HHHHHHHHHHBCTTTCEEEECSC
T ss_pred             EEEECCCC-HHHHHHHHHHhhcCCcEEEEecc
Confidence            99999984 22345667777755 68886653

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=91.42  E-value=0.13  Score=44.74  Aligned_cols=91  Identities=12%  Similarity=0.104  Sum_probs=55.9

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCC---Chh---hHHHhhhcCCc
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK---DYD---FVKSSLSAKGF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~---d~~---~l~~~~~~~~~   73 (314)
                      +| +|.+|...++.+...| .+|+++++++++....         .+  -+...+ .|..   +.+   .+.++....++
T Consensus       202 ~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~---------~~--lGa~~v-i~~~~~~~~~~~~~v~~~~~g~g~  268 (380)
T 1vj0_A          202 QG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA---------EE--IGADLT-LNRRETSVEERRKAIMDITHGRGA  268 (380)
T ss_dssp             EC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH---------HH--TTCSEE-EETTTSCHHHHHHHHHHHTTTSCE
T ss_pred             EC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH---------HH--cCCcEE-EeccccCcchHHHHHHHHhCCCCC
Confidence            36 7999999999999999 6999999887653211         11  122221 3443   222   23333322369


Q ss_pred             cEEEEcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           74 DVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        74 d~vi~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      |+||+++|.. ......++.++...+++.++.
T Consensus       269 Dvvid~~g~~-~~~~~~~~~l~~~G~iv~~G~  299 (380)
T 1vj0_A          269 DFILEATGDS-RALLEGSELLRRGGFYSVAGV  299 (380)
T ss_dssp             EEEEECSSCT-THHHHHHHHEEEEEEEEECCC
T ss_pred             cEEEECCCCH-HHHHHHHHHHhcCCEEEEEec
Confidence            9999999842 234556667764457776554

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=91.32  E-value=0.095  Score=46.03  Aligned_cols=81  Identities=10%  Similarity=-0.018  Sum_probs=52.4

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|+.+++.|...|.+|+++++++.......           ..++..        .++.+++.  +.|+|+.+.+.
T Consensus       218 G~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~-----------~~G~~~--------~sL~eal~--~ADVVilt~gt  276 (436)
T 3h9u_A          218 GYGDVGKGCAAALRGFGARVVVTEVDPINALQAA-----------MEGYQV--------LLVEDVVE--EAHIFVTTTGN  276 (436)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTCEE--------CCHHHHTT--TCSEEEECSSC
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHH-----------HhCCee--------cCHHHHHh--hCCEEEECCCC
Confidence            4699999999999999999999988764321000           122222        14778888  89999976654


Q ss_pred             CcccHHHHHHhCCCCCcEEEEe
Q 021331           83 EADEVEPILDALPNLEQFIYCS  104 (314)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~i~~S  104 (314)
                      ...-....++.|+....+|.++
T Consensus       277 ~~iI~~e~l~~MK~gAIVINvg  298 (436)
T 3h9u_A          277 DDIITSEHFPRMRDDAIVCNIG  298 (436)
T ss_dssp             SCSBCTTTGGGCCTTEEEEECS
T ss_pred             cCccCHHHHhhcCCCcEEEEeC
Confidence            3332334566666544555444

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=91.30  E-value=0.28  Score=47.05  Aligned_cols=89  Identities=17%  Similarity=0.188  Sum_probs=56.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHH---HhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK---SSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~---~~~~~~~~d~vi   77 (314)
                      .||+|.+|...++.+...|.+|++++++. +.. .+.-         ... .  ..|..+.+..+   +.....++|+|+
T Consensus       352 ~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~-~l~l---------ga~-~--v~~~~~~~~~~~i~~~t~g~GvDvVl  417 (795)
T 3slk_A          352 HSAAGGVGMAAIQLARHLGAEVYATASED-KWQ-AVEL---------SRE-H--LASSRTCDFEQQFLGATGGRGVDVVL  417 (795)
T ss_dssp             ESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGG-GSCS---------CGG-G--EECSSSSTHHHHHHHHSCSSCCSEEE
T ss_pred             ecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhh-hhhc---------Chh-h--eeecCChhHHHHHHHHcCCCCeEEEE
Confidence            38899999999999999999999988654 311 1110         011 1  12444443333   333334799999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ++.+.  ......++.++...+||.++.
T Consensus       418 d~~gg--~~~~~~l~~l~~~Gr~v~iG~  443 (795)
T 3slk_A          418 NSLAG--EFADASLRMLPRGGRFLELGK  443 (795)
T ss_dssp             ECCCT--TTTHHHHTSCTTCEEEEECCS
T ss_pred             ECCCc--HHHHHHHHHhcCCCEEEEecc
Confidence            98875  334566666766668887654

>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*

Probab=91.22  E-value=0.34  Score=42.36  Aligned_cols=82  Identities=17%  Similarity=0.046  Sum_probs=54.4

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|.+|++.+|......               .++.       ...+++++++  ++|+|+.+...
T Consensus       152 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~---------------~~~~-------~~~~l~ell~--~aDvV~l~~P~  207 (404)
T 1sc6_A          152 GYGHIGTQLGILAESLGMYVYFYDIENKLPL---------------GNAT-------QVQHLSDLLN--MSDVVSLHVPE  207 (404)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCCCC---------------TTCE-------ECSCHHHHHH--HCSEEEECCCS
T ss_pred             eECHHHHHHHHHHHHCCCEEEEEcCCchhcc---------------CCce-------ecCCHHHHHh--cCCEEEEccCC
Confidence            5799999999999999999999998654310               1111       1124677887  88998876544


Q ss_pred             Cc----ccHHHHHHhCCCCCcEEEEeecee
Q 021331           83 EA----DEVEPILDALPNLEQFIYCSSAGV  108 (314)
Q Consensus        83 ~~----~~~~~~~~~~~~~~~~i~~Ss~~v  108 (314)
                      +.    .-....+..|+....+|.+|+.++
T Consensus       208 t~~t~~li~~~~l~~mk~ga~lIN~aRg~~  237 (404)
T 1sc6_A          208 NPSTKNMMGAKEISLMKPGSLLINASRGTV  237 (404)
T ss_dssp             STTTTTCBCHHHHHHSCTTEEEEECSCSSS
T ss_pred             ChHHHHHhhHHHHhhcCCCeEEEECCCChH
Confidence            31    112356677776667777776443

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=91.19  E-value=0.4  Score=39.53  Aligned_cols=48  Identities=15%  Similarity=0.244  Sum_probs=37.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      +|+++.+|+.++..|++.|.+|+++.+...                                .+.+.+.  +.|+||.+.
T Consensus       166 vGrs~iVG~p~A~lL~~~gAtVtv~h~~t~--------------------------------~L~~~~~--~ADIVI~Av  211 (285)
T 3p2o_A          166 IGASNIVGRPMATMLLNAGATVSVCHIKTK--------------------------------DLSLYTR--QADLIIVAA  211 (285)
T ss_dssp             ECCCTTTHHHHHHHHHHTTCEEEEECTTCS--------------------------------CHHHHHT--TCSEEEECS
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCCch--------------------------------hHHHHhh--cCCEEEECC
Confidence            377888999999999999999888765421                                2556777  899999998


Q ss_pred             CC
Q 021331           81 GR   82 (314)
Q Consensus        81 ~~   82 (314)
                      +.
T Consensus       212 g~  213 (285)
T 3p2o_A          212 GC  213 (285)
T ss_dssp             SC
T ss_pred             CC
Confidence            74

>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}

Probab=91.18  E-value=0.3  Score=42.73  Aligned_cols=81  Identities=17%  Similarity=0.069  Sum_probs=51.9

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|++|++.++.+....               .+.       ....++++++.  ++|+|+.+...
T Consensus       163 GlG~IG~~vA~~l~~~G~~V~~yd~~~~~~~---------------~~~-------~~~~sl~ell~--~aDvV~lhvPl  218 (416)
T 3k5p_A          163 GYGNIGSQVGNLAESLGMTVRYYDTSDKLQY---------------GNV-------KPAASLDELLK--TSDVVSLHVPS  218 (416)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECTTCCCCB---------------TTB-------EECSSHHHHHH--HCSEEEECCCC
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEECCcchhcc---------------cCc-------EecCCHHHHHh--hCCEEEEeCCC
Confidence            5699999999999999999999998743311               111       11234677777  78888866543


Q ss_pred             Cc----ccHHHHHHhCCCCCcEEEEeece
Q 021331           83 EA----DEVEPILDALPNLEQFIYCSSAG  107 (314)
Q Consensus        83 ~~----~~~~~~~~~~~~~~~~i~~Ss~~  107 (314)
                      ..    .-....+..|+....+|.+|...
T Consensus       219 t~~T~~li~~~~l~~mk~gailIN~aRG~  247 (416)
T 3k5p_A          219 SKSTSKLITEAKLRKMKKGAFLINNARGS  247 (416)
T ss_dssp             -----CCBCHHHHHHSCTTEEEEECSCTT
T ss_pred             CHHHhhhcCHHHHhhCCCCcEEEECCCCh
Confidence            21    11234566676555666666543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	314
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	7e-28
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	3e-27
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	1e-25
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-25
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	8e-19
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	9e-19
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	6e-18
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	7e-17
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	2e-16
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-15
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	4e-15
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	4e-15
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	1e-14
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	3e-14
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	4e-14
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	9e-14
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	2e-13
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-13
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-11
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	1e-09
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	3e-09
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	9e-09
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	4e-08
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	5e-07
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	7e-07
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	1e-06
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	2e-06
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	2e-05
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	4e-04
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	0.002
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	0.004

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score =  107 bits (269), Expect = 7e-28
 Identities = 52/314 (16%), Positives = 98/314 (31%), Gaps = 41/314 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG-ESDQEFAEFSSKILHLKGDRKD 60
           GG  FIG    R L+   +            +    G  ++    +   ++  + GD +D
Sbjct: 7   GGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRD 66

Query: 61  YDFVKSS---------LSAKGFDVVYDINGREADEVEP-----ILDAL--PNLEQFIYCS 104
              +             +A+              E        +L       + + ++ S
Sbjct: 67  AGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVS 126

Query: 105 SAGVYLKSDLLPHCE------------SRHKGKLNTESVLESKGVNWTSLRPVYIYGPL- 151
           +  VY   D     E            S+    L   +   + G++    R    YGP  
Sbjct: 127 TNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQ 186

Query: 152 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 211
           +   +   F   L  G  +P+ G G  V +  H  D  R    VL   +A  ++++I G 
Sbjct: 187 HPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAG-EIYHIGGG 245

Query: 212 KYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWK 271
             +T   L      + G     +     ++            D  +     K +  LG++
Sbjct: 246 LELTNRELTGILLDSLGADWSSVRKVADRKGH----------DLRYSLDGGKIERELGYR 295

Query: 272 PEFDLVEGLADSYN 285
           P+    +GLA +  
Sbjct: 296 PQVSFADGLARTVR 309

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 3e-27
 Identities = 63/322 (19%), Positives = 108/322 (33%), Gaps = 65/322 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  F+G  L+  L+ +GH+VT+         + +              I H   +  ++
Sbjct: 8   GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE-----------HWIGHENFELINH 56

Query: 62  DFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE--------------QFIYC 103
           D V+        D +Y      +        PI     N                + +  
Sbjct: 57  DVVEPLY--IEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGARLLLA 113

Query: 104 SSAGVYLKSDLLPHCESR-------------HKGKLNTESVL----ESKGVNWTSLRPVY 146
           S++ VY   ++ P  E                +GK   E++     + +GV     R   
Sbjct: 114 STSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 173

Query: 147 IYGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 203
            +GP   +N   V   F  +   G P+ + GSG Q     +V DL    V ++ +  +  
Sbjct: 174 TFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVS-- 231

Query: 204 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEK 263
              N+   +  T    A+      G            E  F  +       Q     ++K
Sbjct: 232 SPVNLGNPEEHTILEFAQLIKNLVGSG---------SEIQFLSEA--QDDPQKRKPDIKK 280

Query: 264 AKHVLGWKPEFDLVEGLADSYN 285
           AK +LGW+P   L EGL  + +
Sbjct: 281 AKLMLGWEPVVPLEEGLNKAIH 302

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score =  102 bits (256), Expect = 1e-25
 Identities = 58/354 (16%), Positives = 101/354 (28%), Gaps = 62/354 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G +L+  L+++G++V    R  +    +      Q+    + K     GD  D 
Sbjct: 8   GVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDT 67

Query: 62  DFVKSSLSAKGFDVVYDINGREADEV---EP-------------ILDA-----LPNLEQF 100
             +   L     D VY++       V    P             +L+A     L    +F
Sbjct: 68  SNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRF 127

Query: 101 IYCSSAGVYLKSDLLPHCESRH--------KGKLNTESVL----ESKGVNWTSLRPVYIY 148
              S++ +Y     +P  E+            KL    +     ES G+   +       
Sbjct: 128 YQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHE 187

Query: 149 GPL-----NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 203
            P          +     +  +        G+   +   GH KD  +    +L  E+   
Sbjct: 188 SPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQP-- 245

Query: 204 QVFNISGEKYVTFDGLARACAKAAGFPEP--------------------ELVHYNPKEFD 243
           + F I+     +        A   G                          V        
Sbjct: 246 EDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIA 305

Query: 244 FGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRKEA 297
              +   P   +       KA   LGWKPE  L E +++    D      +K +
Sbjct: 306 VDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEA--AKKHS 357

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  102 bits (255), Expect = 1e-25
 Identities = 59/336 (17%), Positives = 95/336 (28%), Gaps = 62/336 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQ--VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           GG  FIG  + R ++K      V +     A   + L   S+     F         D  
Sbjct: 7   GGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNF------EHADIC 60

Query: 60  DYDFVKSSLSAKGFDVVY---DINGREADEVEPILDALPNLE------------------ 98
           D   +         D V      +  +     P      N+                   
Sbjct: 61  DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120

Query: 99  ------QFIYCSSAGVYLKSDLLPHCESRHKGKLNTE----------------------S 130
                 +F + S+  VY         E+     L TE                      +
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180

Query: 131 VLESKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 189
              + G+          YGP ++   +          G+P+PI G G Q+    +V+D A
Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240

Query: 190 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKA 249
           RA   V+   KA  + +NI G        +            P+   Y  +      +  
Sbjct: 241 RALHMVVTEGKAG-ETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADR-- 297

Query: 250 FPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYN 285
            P  D+ +     K    LGWKP      G+  +  
Sbjct: 298 -PGHDRRYAIDAGKISRELGWKPLETFESGIRKTVE 332

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 83.1 bits (204), Expect = 8e-19
 Identities = 50/320 (15%), Positives = 94/320 (29%), Gaps = 50/320 (15%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G +L++LL+++G++V      ++                    I +  GD  D 
Sbjct: 7   GITGQDGAYLAKLLLEKGYRVHGLVARRSSDT-----RWRLRELGIEGDIQYEDGDMADA 61

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALP------------------NLEQFIYC 103
             V+ ++       VY++  +                               + E   Y 
Sbjct: 62  CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ 121

Query: 104 SSAGVYLKSDLLPHCE-------------SRHKGKLNTESVLESKGVNWTSLRPVYIYGP 150
           +S             +             ++  G   T +  ES G++ +S        P
Sbjct: 122 ASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESP 181

Query: 151 LNYNPVEEW----FFHRLKAGRPIPIP-GSGIQVTQLGHVKDLARAFVQVLGNEKASRQV 205
           L               R+K G+   +  G+       G   D   A   +L  +K     
Sbjct: 182 LRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--ADD 239

Query: 206 FNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAK 265
           + ++     T   + +   +  G    + +  +P  F        P        +  KA+
Sbjct: 240 YVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFR-------PAEVDVLLGNPAKAQ 292

Query: 266 HVLGWKPEFDLVEGLADSYN 285
            VLGWKP   L E +     
Sbjct: 293 RVLGWKPRTSLDELIRMMVE 312

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 83.1 bits (204), Expect = 9e-19
 Identities = 53/318 (16%), Positives = 103/318 (32%), Gaps = 40/318 (12%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L   L+K   +V           + L         +  S    ++GD ++ 
Sbjct: 23  GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNL 82

Query: 62  DFVKSSLSA-KGFDVVYDINGREADEVEPILDALPNLE---------------QFIYCSS 105
           D   ++ +          +        +PI     N++                F Y +S
Sbjct: 83  DDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 142

Query: 106 AGVYLKSDLLPHCES------------RHKGKLNTESVLESKGVNWTSLRPVYIYGP--- 150
           +  Y     LP  E             ++  +L  +      G +   LR   ++G    
Sbjct: 143 SSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQD 202

Query: 151 --LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR-QVFN 207
               Y  V   +   +  G  + I G G       ++++  +A +        +R QV+N
Sbjct: 203 PNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYN 262

Query: 208 ISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHV 267
           I+     + + L  A                 +E  +   +      +H  A + KA  +
Sbjct: 263 IAVGGRTSLNQLFFALRDGLAENGVSY----HREPVYRDFR--EGDVRHSLADISKAAKL 316

Query: 268 LGWKPEFDLVEGLADSYN 285
           LG+ P++D+  G+A +  
Sbjct: 317 LGYAPKYDVSAGVALAMP 334

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.8 bits (198), Expect = 6e-18
 Identities = 49/334 (14%), Positives = 89/334 (26%), Gaps = 47/334 (14%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T   G +L+  L+++G++V    R   +    ++        A     +    GD  D
Sbjct: 8   GITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTD 67

Query: 61  YDFVKSSLSAKGFDVV-------------------YDINGREADEVEPILDA--LPNLEQ 99
              +   ++      +                    D++G     +   +    L N  +
Sbjct: 68  STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVK 127

Query: 100 FIYCSSAGVYLKSDLLPHCESRH--------KGKLNTESVL----ESKGVNWTSLRPVYI 147
           F   S++ +Y K   +P  E+            KL    ++    E+  +   +      
Sbjct: 128 FYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNH 187

Query: 148 YGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 202
             P          +                 G+       GH KD   A   +L N++  
Sbjct: 188 ESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPE 247

Query: 203 RQVFNISGEKYVTFDGLARACA-----KAAGFPEPELVHYNPKEFDFGKKKAFPFR---D 254
             V        V                  G  E E+                 +R    
Sbjct: 248 DFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEV 307

Query: 255 QHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDF 288
                   KAK  L WKP     E + +  + D 
Sbjct: 308 DFLQGDCTKAKQKLNWKPRVAFDELVREMVHADV 341

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 77.7 bits (190), Expect = 7e-17
 Identities = 60/339 (17%), Positives = 106/339 (31%), Gaps = 73/339 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG+ +IG      L++ GH V +       K  +   +     +           ++GD 
Sbjct: 7   GGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPT-------FVEGDI 59

Query: 59  KDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPN---------------LEQF 100
           ++   +   L     D V     +        +P+     N               ++ F
Sbjct: 60  RNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNF 119

Query: 101 IYCSSAGVYLKSDLLPHCESRHKG--------------KLNTESVLESKGVNWTSLRPVY 146
           I+ SSA VY     +P+ ES   G              ++ T+        +   LR   
Sbjct: 120 IFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFN 179

Query: 147 IYGPLNYNPVEEW----------FFHRLKAGR--PIPIPGS------GIQVTQLGHVKDL 188
             G      + E           +  ++  GR   + I G+      G  V    HV DL
Sbjct: 180 PVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL 239

Query: 189 ARAFVQVLGNEKASR--QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGK 246
           A   V  +          ++N+      +   +  A +KA G P     H+ P+      
Sbjct: 240 ADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVN--YHFAPRR----- 292

Query: 247 KKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYN 285
                     ++A   KA   L W+    L E   D+++
Sbjct: 293 ----EGDLPAYWADASKADRELNWRVTRTLDEMAQDTWH 327

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 76.1 bits (186), Expect = 2e-16
 Identities = 61/338 (18%), Positives = 98/338 (28%), Gaps = 91/338 (26%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +G  + R L + G    +                              + +  D 
Sbjct: 9   GHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------ELNLLDS 43

Query: 62  DFVKSSLSAKGFDVVY----------DINGREADEVEPILDALPNL---------EQFIY 102
             V    +++  D VY            N   AD +   +    N+          + ++
Sbjct: 44  RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLF 103

Query: 103 CSSAGVYLKSDLLPHCESRH-------------KGKLNTESVLES----KGVNWTSLRPV 145
             S+ +Y K    P  ES                 K+    + ES     G ++ S+ P 
Sbjct: 104 LGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPT 163

Query: 146 YIYGPL-NYNPVEEWFFHRLK---------AGRPIPIPGSGIQVTQLGHVKDLARAFVQV 195
            +YGP  N++P        L              + + GSG  + +  HV D+A A + V
Sbjct: 164 NLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHV 223

Query: 196 LGNEKASRQ--------VFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKK 247
           +                  N+      T   LA+  AK  G+              F   
Sbjct: 224 MELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKG---------RVVFDAS 274

Query: 248 KAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYN 285
           K  P         V +    LGW  E  L  GLA +Y 
Sbjct: 275 K--PDGTPRKLLDVTRLHQ-LGWYHEISLEAGLASTYQ 309

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 73.5 bits (179), Expect = 2e-15
 Identities = 53/325 (16%), Positives = 83/325 (25%), Gaps = 56/325 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG      +      V +    K   A    G      A    ++  + GD  D 
Sbjct: 9   GGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYA----GNKANLEAILGDRVELVVGDIADA 64

Query: 62  DFVKSSLSAKGFDVVY-DINGREADEVEPILDALPNLEQFIYCSSA-------------- 106
           + V    +     V Y   +  +    +P      N         A              
Sbjct: 65  ELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTD 124

Query: 107 ---GVYLKSDLLPHCESRHKGKLNTESVL---------------------ESKGVNWTSL 142
              G     + LP        K   E+                        S GV  T  
Sbjct: 125 EVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATIS 184

Query: 143 RPVYIYGPL-NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 201
                YGP  +           + AG    + G G  V    H  D +     +L   + 
Sbjct: 185 NCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRM 244

Query: 202 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASV 261
                  +  +    + +     +  G P+    H   +             D  +    
Sbjct: 245 GETYLIGADGEKNNKE-VLELILEKMGQPKDAYDHVTDRAGH----------DLRYAIDA 293

Query: 262 EKAKHVLGWKPEF-DLVEGLADSYN 285
            K +  LGW P+F D  EGL ++  
Sbjct: 294 SKLRDELGWTPQFTDFSEGLEETIQ 318

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 72.5 bits (176), Expect = 4e-15
 Identities = 52/347 (14%), Positives = 101/347 (29%), Gaps = 83/347 (23%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           GG  F+G  L+   + +G  +     L  +G       L    + EF         + GD
Sbjct: 7   GGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEF---------VHGD 57

Query: 58  RKDYDFVKSSLSAKGFDVVYDINGREADEV---EPILDALPNLE---------------- 98
            ++ + V   ++    D  + + G+ A       P +D   N+                 
Sbjct: 58  IRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNC 117

Query: 99  QFIYCSSAGVYLKSDLLPHCE----------------------------SRHKGKLNTES 130
             IY S+  VY   +   + E                            S+         
Sbjct: 118 NIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLD 177

Query: 131 VLESKGVNWTSLRPVYIYGPLNYNPVEEWFFH---------RLKAGRPIPIPGSGIQVTQ 181
                G+N    R   +YG   +   ++ +           +    +P  I G+G QV  
Sbjct: 178 YARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD 237

Query: 182 LGHVKDLARAFVQVLGNEKASR---QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYN 238
           + H +D+   +   L N    R        +    ++   L +                 
Sbjct: 238 VLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCN---------- 287

Query: 239 PKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYN 285
             +  F          + F A ++K  + + W P+    +G+   Y+
Sbjct: 288 -IDMRFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYD 333

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 72.7 bits (177), Expect = 4e-15
 Identities = 57/316 (18%), Positives = 99/316 (31%), Gaps = 47/316 (14%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FI   ++R L  EGH V      K     +     +    +       LK   +  
Sbjct: 22  GAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLK-VTEGV 80

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPIL-------DALPNLEQFIYCSSAGVY----- 109
           D V +  +  G       N         ++         +  +++F Y SSA +Y     
Sbjct: 81  DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQ 140

Query: 110 LKSDLLPHCESRH----------KGKLNTESVLES----KGVNWTSLRPVYIYGP----- 150
           L++  +   ES              KL TE + +      G+     R   IYGP     
Sbjct: 141 LETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWK 200

Query: 151 -LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 209
                    +      +     + G G+Q      + +     +++   +   R+  NI 
Sbjct: 201 GGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT--KSDFREPVNIG 258

Query: 210 GEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLG 269
            ++ V+ + +A           P  +H+ P           P   +   +     K  LG
Sbjct: 259 SDEMVSMNEMAEMVLSFEEKKLP--IHHIPG----------PEGVRGRNSDNNLIKEKLG 306

Query: 270 WKPEFDLVEGLADSYN 285
           W P   L EGL  +Y 
Sbjct: 307 WAPNMRLKEGLRITYF 322

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 71.0 bits (172), Expect = 1e-14
 Identities = 40/290 (13%), Positives = 92/290 (31%), Gaps = 14/290 (4%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T +IG  +++  +  GH   L  R     +     +  + F   +S    + G   D+
Sbjct: 10  GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDH 67

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC 118
             +  ++  K  DVV    G    E +  +          +  + S  G  + +      
Sbjct: 68  ASLVEAV--KNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEP 125

Query: 119 ESR-HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGI 177
                + K      +E++G+ +T +      G   +                + I G G 
Sbjct: 126 AKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGY--FLRSLAQAGLTAPPRDKVVILGDGN 183

Query: 178 QVTQLGHVKDLARAFVQVLGNEKASRQV-FNISGEKYVTFDGLARACAKAAGFPEPELVH 236
                   +D+    ++ + + +   +  +       ++ + L     K           
Sbjct: 184 ARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLE--KA 241

Query: 237 YNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNL 286
           Y P+E +  K  A      +   ++  +  V G +  F++     ++  L
Sbjct: 242 YVPEE-EVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGPAGVEASQL 290

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 70.1 bits (170), Expect = 3e-14
 Identities = 52/347 (14%), Positives = 94/347 (27%), Gaps = 81/347 (23%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  +IG      L++ G+   +    +        +L   +          I   + D 
Sbjct: 8   GGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK-------HHIPFYEVDL 60

Query: 59  KDYDFVKSSLSAKGFDVV------------------YDINGREADEVEPILDALPNLEQF 100
            D   ++        D V                  Y  N      V   L    N+ +F
Sbjct: 61  CDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKF 120

Query: 101 IYCSSAGVYLKS----DLLPHCESRHKGKLNTESV--------------LESKGVNWTSL 142
           ++ SSA VY  +    +++P  E    G  N                   + K   +  L
Sbjct: 121 VFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAIL 180

Query: 143 RPVYIYGPLNYNPVEEWFFHR------------LKAGRPIPIPGSGIQVTQLGHVKDLAR 190
           R     G      + E                 +     + I G          ++D   
Sbjct: 181 RYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIH 240

Query: 191 AFVQVLGNEKASRQ------------VFNISGEKYVTFDGLARACAKAAGFPEPELVHYN 238
                 G+  A +              +N+   K  T   +  A  KA+G   P      
Sbjct: 241 VVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLP------ 294

Query: 239 PKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYN 285
              +    ++       +  A  ++AK  L W+ E  + +   D + 
Sbjct: 295 ---YKVTGRR--AGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWK 336

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 69.3 bits (168), Expect = 4e-14
 Identities = 43/324 (13%), Positives = 84/324 (25%), Gaps = 49/324 (15%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKD 60
           G T   G +L+  L+ +G++V    R  +    Q       +    +  ++ L   D  D
Sbjct: 8   GITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTD 67

Query: 61  YDFVKSSLSAKGFDVVYD-----------------------INGREADEVEPILDALPNL 97
              ++  +     D VY+                          R  + V          
Sbjct: 68  ASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRT 127

Query: 98  EQFIYCSSAGVYLKSDLL-----------PHCESRHKGKLNTESVLESKGVNWTSLRPVY 146
            ++    S+ ++  +              P+  S+      T +  E+ G+   +     
Sbjct: 128 VKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFN 187

Query: 147 IYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 201
              P          +           +     G+       G   D   A   +L  EK 
Sbjct: 188 HESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKP 247

Query: 202 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASV 261
              V                   +        L        +  ++   P    +     
Sbjct: 248 DDYVVATEEGHT---------VEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDA 298

Query: 262 EKAKHVLGWKPEFDLVEGLADSYN 285
            KAK VLGWKP+    + +    +
Sbjct: 299 SKAKEVLGWKPQVGFEKLVKMMVD 322

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 68.3 bits (165), Expect = 9e-14
 Identities = 23/249 (9%), Positives = 68/249 (27%), Gaps = 13/249 (5%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT +IG  +    +  GH   +  R +         +              ++    D+
Sbjct: 10  GGTGYIGKRIVNASISLGHPTYVLFRPEVVSN---IDKVQMLLYFKQLGAKLIEASLDDH 66

Query: 62  DFVKSSLSAKGFDVV-----YDINGREADEVEPILDALPNLEQFIYCSSAGVYLKS--DL 114
             +  +L      +         +                  +    S  G+        
Sbjct: 67  QRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHA 126

Query: 115 LPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 174
           L         K      +E+  + +T +      G      + +   H +     + I G
Sbjct: 127 LQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFA-GSLAQLDGHMMPPRDKVLIYG 185

Query: 175 SGIQVTQLGHVKDLARAFVQVLGNEKASRQ-VFNISGEKYVTFDGLARACAKAAGFPEPE 233
            G          D+    ++ + + +   + ++       ++   + +   + +     +
Sbjct: 186 DGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQN-LD 244

Query: 234 LVHYNPKEF 242
            ++ + ++F
Sbjct: 245 KIYISSQDF 253

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.8 bits (159), Expect = 2e-13
 Identities = 27/211 (12%), Positives = 61/211 (28%), Gaps = 17/211 (8%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G+      V+ G++VT+  R  + +  + P  +     +        K      
Sbjct: 10  GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQD 69

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESR 121
             +   L     D+       E             +++ + C+SA +      +P     
Sbjct: 70  AVI--VLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQA 127

Query: 122 HKG-KLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVT 180
                +    VL   G+ + ++ P                  +   G    +   G   +
Sbjct: 128 VTDDHIRMHKVLRESGLKYVAVMPP-------------HIGDQPLTGA-YTVTLDGRGPS 173

Query: 181 QLGHVKDLARAFVQVLGNEKASRQVFNISGE 211
           ++    DL    ++ L  ++        S +
Sbjct: 174 RVISKHDLGHFMLRCLTTDEYDGHSTYPSHQ 204

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.0 bits (162), Expect = 3e-13
 Identities = 50/338 (14%), Positives = 90/338 (26%), Gaps = 65/338 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT-LFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRK 59
           GG  +IG      L++ G+    +     A        ES +   E + + +   + D  
Sbjct: 9   GGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDIL 68

Query: 60  DYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNLEQFIYCSSAGVYLK----- 111
           D   ++       F  V     +        +P+     NL   I               
Sbjct: 69  DQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLV 128

Query: 112 -------------------SDLLPHCESRHKGKLNTESVLES-----KGVNWTSLRPVYI 147
                                         K K   E ++       K  N   LR    
Sbjct: 129 FSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNP 188

Query: 148 YGPLNYNPVEEW----------FFHRLKAGRPIPIP--------GSGIQVTQLGHVKDLA 189
            G      + E           +  ++  GR   +           G  V    HV DLA
Sbjct: 189 TGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLA 248

Query: 190 RAFV--QVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKK 247
           +  +       E+   +++N+      +   + +A  KA+G   P         +    +
Sbjct: 249 KGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP---------YKVVAR 299

Query: 248 KAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYN 285
           +         +A+   A+  LGW     L     D + 
Sbjct: 300 R--EGDVAACYANPSLAQEELGWTAALGLDRMCEDLWR 335

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 61.7 bits (148), Expect = 2e-11
 Identities = 40/209 (19%), Positives = 67/209 (32%), Gaps = 51/209 (24%)

Query: 116 PHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWF--------------- 160
           P+ ES+   +       E+ G+    LR     G      + E +               
Sbjct: 174 PYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVM 233

Query: 161 -----------FHRLKAGRPIPIPGS------GIQVTQLGHVKDLARAFVQVLGNEK--- 200
                             + +PI G+      G  V    HV DLA A +  L   +   
Sbjct: 234 SDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLG 293

Query: 201 -----ASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQ 255
                    VFN+   +  +   +     K  G P P  V    +               
Sbjct: 294 PNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIP--VRECGRR---------EGDPA 342

Query: 256 HFFASVEKAKHVLGWKPEFDLVEGLADSY 284
           +  A+ +KA+ VLGWKP++D +E + ++ 
Sbjct: 343 YLVAASDKAREVLGWKPKYDTLEAIMETS 371

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 56.6 bits (135), Expect = 1e-09
 Identities = 36/240 (15%), Positives = 69/240 (28%), Gaps = 23/240 (9%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T   G  L R+    GH V       K  IA++L    +    +         G   +
Sbjct: 10  GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQ---------GPLLN 60

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL------EQFIYCSSAGVYLKSDL 114
              +  +L  +G  + +     +A +   I   L +        Q    SS   +     
Sbjct: 61  NVPLMDTL-FEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGP 119

Query: 115 LPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIP 173
            P               +   G+  T +            P   +    +  G      P
Sbjct: 120 WPAVPMWAPKFTVEN-YVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAP 178

Query: 174 GSG-IQVTQLGHVKDLARAFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKAAGFP 230
               I +  L    D+  A +Q+  +  +K +     ++ E   +   +  A ++A    
Sbjct: 179 FDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETL-SPVQVCAAFSRALNRR 237

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 54.5 bits (129), Expect = 3e-09
 Identities = 21/226 (9%), Positives = 52/226 (23%), Gaps = 19/226 (8%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G +   G  + + L +   +       ++   ++  G     F    +    +    +  
Sbjct: 10  GASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGI 69

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESR 121
           D +    SA            +  +         + +        G   + D       +
Sbjct: 70  DALVILTSAVPKMKPGF----DPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVK 125

Query: 122 HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQ 181
           H   + +                  +                    R   +      V +
Sbjct: 126 HIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRE 185

Query: 182 LG---------------HVKDLARAFVQVLGNEKASRQVFNISGEK 212
           L                   D+A   +Q L  E+A  + F++  + 
Sbjct: 186 LLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKP 231

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 53.7 bits (127), Expect = 9e-09
 Identities = 35/334 (10%), Positives = 75/334 (22%), Gaps = 67/334 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   F+   +   L++ G++V    R  + +A        +    F + +     D    
Sbjct: 18  GANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAV---VEDMLKQ 74

Query: 62  DFVKSSLSAKGFDVVYDINGREAD--------------EVEPILDALPNLEQFIYCSSAG 107
                 +               ++                     A P++++F+  SS  
Sbjct: 75  GAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV 134

Query: 108 VYL----------------------------KSDLLPHCESRHKGKLNTESVLESKGVNW 139
             L                            +SD           K   E          
Sbjct: 135 SALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDEN 194

Query: 140 TSLRPVYI----------YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 189
                +            + P   +     +   L  G   P     +         D+ 
Sbjct: 195 KPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALA-LMPPQYYVSAVDIG 253

Query: 190 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKA 249
              +  L   +  R+    +   +  ++ +     K   +P        P +F       
Sbjct: 254 LLHLGCLVLPQIERRRVYGTAGTF-DWNTVLATFRKL--YPSKTF----PADF----PDQ 302

Query: 250 FPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADS 283
                +   A   +    LG      + E + D 
Sbjct: 303 GQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDL 336

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 51.4 bits (121), Expect = 4e-08
 Identities = 31/282 (10%), Positives = 80/282 (28%), Gaps = 16/282 (5%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +G  + + L  +  +V         I        ++ F E    ++         
Sbjct: 8   GANGQLGREIQKQLKGKNVEVIPTDVQDLDITN--VLAVNKFFNEKKPNVVINCAAHTAV 65

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLK-SDLLPHCES 120
           D  +                  A       + +     +++   A   +   D +    +
Sbjct: 66  DKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSA 125

Query: 121 RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVT 180
             K KL  E+ +++    +  +R  ++YG  N          +      +     G   +
Sbjct: 126 YGKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTS 185

Query: 181 QLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPK 240
            +   +      V +   ++ +   F+ + +   ++   A    +  G    ++     +
Sbjct: 186 TVDLAR------VVLKVIDEKNYGTFHCTCKGICSWYDFAVEIFRLTGID-VKVTPCTTE 238

Query: 241 EFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLAD 282
           EF    K     R ++        +   G     +  E L +
Sbjct: 239 EFPRPAK-----RPKYSVLRNYMLELTTGDITR-EWKESLKE 274

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 47.5 bits (111), Expect = 5e-07
 Identities = 25/205 (12%), Positives = 52/205 (25%), Gaps = 13/205 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  L   ++ E     +    +  +A+    ++           L  + D    
Sbjct: 9   GATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAE----LLPQLDGSID 64

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESR 121
                  +        +       ++   +          +                 +R
Sbjct: 65  TAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNR 124

Query: 122 HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQ 181
            KG+   +++ E      T  RP  ++GP     + E     +       I         
Sbjct: 125 VKGE-LEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPI-----ARILPGKYHGI- 177

Query: 182 LGHVKDLARAFVQVLGNEKASRQVF 206
                DLARA  ++   E    +  
Sbjct: 178 --EACDLARALWRLALEEGKGVRFV 200

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 47.6 bits (111), Expect = 7e-07
 Identities = 21/134 (15%), Positives = 47/134 (35%), Gaps = 7/134 (5%)

Query: 159 WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL--GNEKASRQVFNI-SGEKYVT 215
                L  G PI +   G Q      ++D   A  +++     +   ++ NI + E   +
Sbjct: 199 QLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEAS 258

Query: 216 FDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRD----QHFFASVEKAKHVLGWK 271
            + L      +               F   +  ++  +     +H   S+  A   L W+
Sbjct: 259 IEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWE 318

Query: 272 PEFDLVEGLADSYN 285
           P+ D+ E + ++ +
Sbjct: 319 PKIDMQETIDETLD 332

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (109), Expect = 1e-06
 Identities = 31/223 (13%), Positives = 63/223 (28%), Gaps = 13/223 (5%)

Query: 2   GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G +   G  L + ++++G   +VTL  R K    ++     +QE  +F           +
Sbjct: 21  GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLD-DYASAFQ 79

Query: 60  DYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE 119
            +D     L         +   R   +       L       + +               
Sbjct: 80  GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLY 139

Query: 120 SRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQV 179
            + KG+     V E K   ++  RP  +      +   EW   +                
Sbjct: 140 LQVKGE-VEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKF-----FGSLPDSWAS 193

Query: 180 TQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA 222
                V  + RA +  +      +Q+  +  +       L +A
Sbjct: 194 GHSVPVVTVVRAMLNNV-VRPRDKQMELLENKAIHD---LGKA 232

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 46.5 bits (108), Expect = 2e-06
 Identities = 35/306 (11%), Positives = 66/306 (21%), Gaps = 49/306 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T  +G  L R L   G+ + L    K                          GD  + 
Sbjct: 7   GKTGQVGWELQRSLAPVGNLIALDVHSK-----------------------EFCGDFSNP 43

Query: 62  DFVKSSLSAKGFDVVYDIN---GREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHC 118
             V  ++     DV+ +       +  E EP L  L N       + A     + ++ + 
Sbjct: 44  KGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYS 103

Query: 119 ESRHKGKLNTESVLESKGVNWTSL-------------------RPVYIYGPLNYNPVEEW 159
                         E+   +  ++                                    
Sbjct: 104 TDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFA 163

Query: 160 FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG---NEKASRQVFNISGEKYVTF 216
                 A     +     Q       + LA      +    N+     ++++      T+
Sbjct: 164 KTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTW 223

Query: 217 DGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDL 276
              A      A      L                  R  +   + EK +           
Sbjct: 224 HDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILP-QW 282

Query: 277 VEGLAD 282
             G+  
Sbjct: 283 ELGVKR 288

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 43.7 bits (101), Expect = 2e-05
 Identities = 36/322 (11%), Positives = 64/322 (19%), Gaps = 44/322 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T F G +LS  L   G  V  ++     +          E A  +  +    GD +D 
Sbjct: 15  GHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF------ETARVADGMQSEIGDIRDQ 68

Query: 62  DFVKSSLSAKGFDVVYD-INGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCES 120
           + +  S+     ++V+                   +                  +    +
Sbjct: 69  NKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVN 128

Query: 121 RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVT 180
               K               ++     Y             +R     P      G  V 
Sbjct: 129 ITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVA 188

Query: 181 QLGH----------VKDLARAFVQVLGNE------------------------KASRQVF 206
            +            +  +    ++                                 Q  
Sbjct: 189 TVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKL 248

Query: 207 NISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQH---FFASVEK 263
              G +Y          A A                    +                  K
Sbjct: 249 YTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSK 308

Query: 264 AKHVLGWKPEFDLVEGLADSYN 285
           AK  LGW P ++L   L     
Sbjct: 309 AKMQLGWHPRWNLNTTLEYIVG 330

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 39.2 bits (89), Expect = 4e-04
 Identities = 11/68 (16%), Positives = 20/68 (29%), Gaps = 10/68 (14%)

Query: 219 LARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHF-FASVEKAKHVLGWKPEFDLV 277
           +A A        + E + +               R Q F  A +   +     KP   + 
Sbjct: 246 VADATLAYHKKGQIEYIPF---------PDKLKGRYQAFTQADLTNLRAAGYDKPFKTVA 296

Query: 278 EGLADSYN 285
           EG+ +   
Sbjct: 297 EGVTEYMA 304

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.9 bits (83), Expect = 0.002
 Identities = 24/129 (18%), Positives = 44/129 (34%), Gaps = 10/129 (7%)

Query: 159 WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV--FNISGEKYVTF 216
            F  +   G P+ + G G Q      ++D  +     + N   + +   FN   E++ + 
Sbjct: 242 RFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQF-SV 300

Query: 217 DGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDL 276
           + LA    KA      +L     K      +      + ++ A   K    LG +P +  
Sbjct: 301 NELASLVTKAGS----KLGLDVKKMTVPNPRV--EAEEHYYNAKHTKLME-LGLEPHYLS 353

Query: 277 VEGLADSYN 285
              L    N
Sbjct: 354 DSLLDSLLN 362

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 35.8 bits (82), Expect = 0.004
 Identities = 26/151 (17%), Positives = 51/151 (33%), Gaps = 14/151 (9%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG R IG+  +R +   G  V +  R  A   +     +++   EF  K    + D  + 
Sbjct: 16  GGNRGIGLAFTRAVAAAGANVAVIYRSAADAVE----VTEKVGKEFGVKTKAYQCDVSNT 71

Query: 62  DFVKSSLSA-----KGFDVVYDINGREADEVEPILDALPNLEQF---IYCSSAGVYLKSD 113
           D V  ++            +          V+P  +       F   +         ++ 
Sbjct: 72  DIVTKTIQQIDADLGPISGLI--ANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAV 129

Query: 114 LLPHCESRHKGKLNTESVLESKGVNWTSLRP 144
                + + KG +   S + S+ +N +SL  
Sbjct: 130 AKLWLQKQQKGSIVVTSSMSSQIINQSSLNG 160

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	314
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.97
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.97
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.96
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.95
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.95
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.94
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.93
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.89
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.89
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.83
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.67
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.66
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.66
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.66
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.64
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.64
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.63
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.63
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.63
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.63
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.63
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.62
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.62
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.62
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.61
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.61
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.6
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.6
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.6
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.59
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.59
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.59
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.59
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.58
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.58
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.58
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.58
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.57
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.56
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.55
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.54
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.54
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.54
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.53
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.52
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.52
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.52
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.51
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.51
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.51
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.47
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.47
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.44
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.44
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.41
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.4
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.38
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.35
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.35
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.31
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.3
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.3
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.28
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.24
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.24
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.23
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.22
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.21
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.19
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.19
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.13
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.08
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.03
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	98.97
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	98.82
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	98.81
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.55
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.84
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.41
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.29
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.22
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.19
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	96.82
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	96.66
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	96.59
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	96.58
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	96.43
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.35
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	96.29
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.27
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.21
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.21
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.06
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.05
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.04
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.96
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	95.94
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	95.88
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.77
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	95.69
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	95.61
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.59
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	95.58
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.42
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	95.38
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	95.27
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.08
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	95.04
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.88
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	94.83
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	94.76
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	94.65
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.64
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.4
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.36
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	94.27
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	94.01
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	94.0
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	93.95
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	93.94
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	93.92
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	93.85
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	93.82
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	93.6
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	93.53
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	93.48
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	93.41
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	93.29
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	93.19
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	93.06
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	93.03
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	92.97
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	92.76
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	92.71
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	92.7
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	92.08
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	92.0
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	91.94
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	91.81
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	91.67
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	91.64
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	91.57
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	91.56
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	91.5
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	91.4
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	91.13
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	91.12
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	91.08
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	91.02
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	90.91
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	90.84
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	90.82
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	90.8
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	90.72
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	90.23
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	90.13
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	89.73
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	89.43
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	89.19
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	88.6
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	88.5
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	88.34
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	88.2
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	88.16
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	87.96
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	87.88
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	87.72
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	87.36
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	87.12
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	87.09
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	86.54
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	86.34
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	86.24
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	86.08
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	86.01
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	85.69
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	85.53
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	85.48
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	85.14
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	85.06
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	85.05
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	84.99
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	84.74
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	84.7
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	84.69
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	84.37
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	84.16
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	84.12
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	84.02
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	83.96
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	83.84
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	83.69
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	83.68
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.58
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	83.44
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	83.35
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	82.45
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	82.08
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	81.74
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	81.5
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	81.35
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	81.26
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	81.02
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	80.96
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	80.45
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	80.34
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	80.24
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	80.07

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-42  Score=303.73  Aligned_cols=286  Identities=19%  Similarity=0.174  Sum_probs=209.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|+++|+++|++|++++|..+.......+...........+++++++|++|.+++.++++..++|+|||+|
T Consensus         7 TGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v~h~a   86 (357)
T d1db3a_           7 TGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLG   86 (357)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSEEEECC
T ss_pred             eCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCEEEEee
Confidence            79999999999999999999999999965431100000000111112468999999999999999999977889999998


Q ss_pred             CC----------------CcccHHHHHHhCC-----CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHH
Q 021331           81 GR----------------EADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESV  131 (314)
Q Consensus        81 ~~----------------~~~~~~~~~~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~  131 (314)
                      +.                |+.++.+++++|+     +.+||||+||..+||.....|..|        .|+.+|..+|++
T Consensus        87 a~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~  166 (357)
T d1db3a_          87 AMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWI  166 (357)
T ss_dssp             CCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             cccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Confidence            76                3456888999875     345799999999998765555554        699999999988


Q ss_pred             HH----hcCCceEEEecCeeeCCCCCCc----hhHHHHHHHHcCCC-eecCCCCCceeeeeeHHHHHHHHHHHhcCCccC
Q 021331          132 LE----SKGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  202 (314)
Q Consensus       132 ~~----~~~~~~~ilR~~~v~g~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~  202 (314)
                      ++    +++++++++||+.+|||+....    .+...+..+..+.. ...+|++++.++++|++|+|+++..+++++  .
T Consensus       167 ~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~--~  244 (357)
T d1db3a_         167 TVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQE--Q  244 (357)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSS--S
T ss_pred             HHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHhCC--C
Confidence            75    4589999999999999964332    23334444444443 445688999999999999999999998875  4


Q ss_pred             CceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCccc-----------cc----------CCCCcccCCCcceeecH
Q 021331          203 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEF-----------DF----------GKKKAFPFRDQHFFASV  261 (314)
Q Consensus       203 ~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~-----------~~----------~~~~~~~~~~~~~~~~~  261 (314)
                      ++.||+++++.+|+.|+++.+.+.+|... .....+....           ..          .....++.....+.+|+
T Consensus       245 ~~~yni~sg~~~s~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~  323 (357)
T d1db3a_         245 PEDFVIATGVQYSVRQFVEMAAAQLGIKL-RFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDP  323 (357)
T ss_dssp             CCCEEECCCCCEEHHHHHHHHHHTTTEEE-EEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCCBCC
T ss_pred             CCeEEECCCCceehHHHHHHHHHHhCCcc-ccccccccccchhhhhhcccccccccCceeEeeccccCCCccccccccCH
Confidence            68999999999999999999999998543 2211111100           00          00111333445667899


Q ss_pred             HhHHhhcCCCcccChHHHHHHHHhhhhc
Q 021331          262 EKAKHVLGWKPEFDLVEGLADSYNLDFG  289 (314)
Q Consensus       262 ~k~~~~lg~~~~~~~~~~l~~~~~~~~~  289 (314)
                      +|++++|||.|+++++++|+++++++++
T Consensus       324 skakk~LGw~P~~sl~egI~~~I~~~l~  351 (357)
T d1db3a_         324 TKAHEKLGWKPEITLREMVSEMVANDLE  351 (357)
T ss_dssp             HHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence            9999999999999999999999876554

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=3.7e-42  Score=296.38  Aligned_cols=271  Identities=19%  Similarity=0.282  Sum_probs=221.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEE------EEEcCCcccc-cCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVT------LFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~------~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~   73 (314)
                      ||||||||++|+++|+++|++|.      ++++...... ..+      .......++.++.+|..+...+.....  .+
T Consensus         6 tG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~------~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~   77 (322)
T d1r6da_           6 TGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL------APVDADPRLRFVHGDIRDAGLLARELR--GV   77 (322)
T ss_dssp             ETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG------GGGTTCTTEEEEECCTTCHHHHHHHTT--TC
T ss_pred             ECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHh------hhhhcCCCeEEEEeccccchhhhcccc--cc
Confidence            79999999999999999997554      4443221110 000      011124689999999999998888877  99


Q ss_pred             cEEEEcCCC----------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhh
Q 021331           74 DVVYDINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLN  127 (314)
Q Consensus        74 d~vi~~a~~----------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~  127 (314)
                      |.|+|+|+.                |..++.+++++|.  ++++|||+||..+|+.....|+.|        .|+.+|..
T Consensus        78 d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~  157 (322)
T d1r6da_          78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAG  157 (322)
T ss_dssp             CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHH
T ss_pred             ceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHH
Confidence            999999876                3456789999987  788999999999998776555555        69999999


Q ss_pred             HHHHHH----hcCCceEEEecCeeeCCCCC-CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccC
Q 021331          128 TESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  202 (314)
Q Consensus       128 ~e~~~~----~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~  202 (314)
                      +|.+++    +++++++++||+.||||++. ..+++.++.++..++++.+++++++.++|+|++|+|+++..+++++. .
T Consensus       158 ~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~-~  236 (322)
T d1r6da_         158 SDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-A  236 (322)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-T
T ss_pred             HHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCC-C
Confidence            999874    56899999999999999864 45788899999999999998999999999999999999999998866 5


Q ss_pred             CceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHH
Q 021331          203 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLAD  282 (314)
Q Consensus       203 ~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~  282 (314)
                      +++||+++++++|+.|+++.+.+.+|.+.+.+...+.          .+.....+.+|++|+++.|||+|+++++++|++
T Consensus       237 ~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~----------~~~~~~~~~~d~~k~~~~lg~~p~~~~eegI~~  306 (322)
T d1r6da_         237 GEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVAD----------RKGHDLRYSLDGGKIERELGYRPQVSFADGLAR  306 (322)
T ss_dssp             TCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECC----------CTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHH
T ss_pred             CCeeEEeecccchhHHHHHHHHHHhCCCccceeecCC----------CCCCCceeeeCHHHHHHHHCCCCCCCHHHHHHH
Confidence            7899999999999999999999999987544433322          122345567899999999999999999999999


Q ss_pred             HHhhhhcC
Q 021331          283 SYNLDFGR  290 (314)
Q Consensus       283 ~~~~~~~~  290 (314)
                      +++|++++
T Consensus       307 ~i~w~~~n  314 (322)
T d1r6da_         307 TVRWYREN  314 (322)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHHh
Confidence            99999974

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-42  Score=294.92  Aligned_cols=264  Identities=22%  Similarity=0.280  Sum_probs=208.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||+|++|+++|+++|++|++++|........+....      ...++.+...|.     ++.++.  ++|+|||+|
T Consensus         7 tG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~------~~~~~d~~~~~~-----~~~~~~--~~d~VihlA   73 (312)
T d2b69a1           7 TGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI------GHENFELINHDV-----VEPLYI--EVDQIYHLA   73 (312)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT------TCTTEEEEECCT-----TSCCCC--CCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhc------CCCceEEEehHH-----HHHHHc--CCCEEEECc
Confidence            7999999999999999999999999875443222221100      013344444444     445555  899999999


Q ss_pred             CCC----------------cccHHHHHHhCC-CCCcEEEEeeceeeccCCCCCccC-------------ccccchhhHHH
Q 021331           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCE-------------SRHKGKLNTES  130 (314)
Q Consensus        81 ~~~----------------~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e-------------~~~~~k~~~e~  130 (314)
                      +..                +.++.+++++|+ ...++||+||..+|+.....|..|             .|+.+|..+|.
T Consensus        74 a~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~  153 (312)
T d2b69a1          74 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAET  153 (312)
T ss_dssp             SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHH
T ss_pred             ccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHH
Confidence            862                345789999988 334899999999998654443332             58999999999


Q ss_pred             HHH----hcCCceEEEecCeeeCCCCC---CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCC
Q 021331          131 VLE----SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  203 (314)
Q Consensus       131 ~~~----~~~~~~~ilR~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~  203 (314)
                      +++    .++++++++||+.||||+..   ..+++.++.++..++++.+++++.+.++++|++|+|+++..+++++.  +
T Consensus       154 ~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~~--~  231 (312)
T d2b69a1         154 MCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV--S  231 (312)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC--C
T ss_pred             HHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhcc--C
Confidence            884    56899999999999999753   34788889999999999999999999999999999999999997654  6


Q ss_pred             ceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHH
Q 021331          204 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADS  283 (314)
Q Consensus       204 ~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~  283 (314)
                      ++||+++++.+++.++++.+++.+|.+. .+...+.          .+.......+|++|++++|||.|+++++++|+++
T Consensus       232 ~~~n~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~----------~~~~~~~~~~d~~k~~~~lgw~p~~~l~~~I~~~  300 (312)
T d2b69a1         232 SPVNLGNPEEHTILEFAQLIKNLVGSGS-EIQFLSE----------AQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKA  300 (312)
T ss_dssp             SCEEESCCCEEEHHHHHHHHHHHHTCCC-CEEEECC----------CTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHH
T ss_pred             CceEecCCcccchhhHHHHHHHHhCCCC-ceEECCC----------CCCCCCeeeECHHHHHHHHCCCCCCCHHHHHHHH
Confidence            7999999999999999999999999765 4443322          1223345667999999999999999999999999


Q ss_pred             HhhhhcC
Q 021331          284 YNLDFGR  290 (314)
Q Consensus       284 ~~~~~~~  290 (314)
                      ++|++++
T Consensus       301 i~w~~~~  307 (312)
T d2b69a1         301 IHYFRKE  307 (312)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998764

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=2.8e-41  Score=295.01  Aligned_cols=281  Identities=19%  Similarity=0.233  Sum_probs=218.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEE-EEcCCccc-ccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTL-FTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      ||||||||++|+++|++.|++|++ +++..... ...+....      ...+++++++|++|++.+.+++...++|+|||
T Consensus         6 tG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih   79 (361)
T d1kewa_           6 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDIS------ESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             ESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTT------TCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhh------hcCCcEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence            799999999999999999987555 44332211 11111100      13689999999999999999998778999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC-----------CCCcEEEEeeceeeccCCCCCcc----------C--
Q 021331           79 INGRE----------------ADEVEPILDALP-----------NLEQFIYCSSAGVYLKSDLLPHC----------E--  119 (314)
Q Consensus        79 ~a~~~----------------~~~~~~~~~~~~-----------~~~~~i~~Ss~~v~~~~~~~~~~----------e--  119 (314)
                      +|+..                ..++.+++++|.           ++++|||+||..+||.....+..          +  
T Consensus        80 lAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~  159 (361)
T d1kewa_          80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT  159 (361)
T ss_dssp             CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred             CccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCC
Confidence            99863                334678888875           24589999999999854321111          1  


Q ss_pred             ------ccccchhhHHHHHH----hcCCceEEEecCeeeCCCCC-CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHH
Q 021331          120 ------SRHKGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  188 (314)
Q Consensus       120 ------~~~~~k~~~e~~~~----~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  188 (314)
                            .|+.+|..+|.++.    +++++++++||+.||||++. ..+++.++.++..++++.+++++++.++|+|++|+
T Consensus       160 ~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~  239 (361)
T d1kewa_         160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (361)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHH
Confidence                  49999999999985    46899999999999999764 45788899999999999888999999999999999


Q ss_pred             HHHHHHHhcCCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhc
Q 021331          189 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVL  268 (314)
Q Consensus       189 a~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l  268 (314)
                      |+++..+++++. .+++|||+++++++..|+++.+.+.++...+....... .  ......++.....+.+|++|++++|
T Consensus       240 a~ai~~~~~~~~-~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~d~~k~~~~l  315 (361)
T d1kewa_         240 ARALHMVVTEGK-AGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYRE-Q--ITYVADRPGHDRRYAIDAGKISREL  315 (361)
T ss_dssp             HHHHHHHHHHCC-TTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGG-G--EEEECCCTTCCCBCCBCCHHHHHHH
T ss_pred             HHHHHHHHhcCC-CCCeEEECCCCCcchHHHHhHhhhhcccccccccCccc-c--eeecCCCCCCCceeeeCHHHHHHHH
Confidence            999999998765 47899999999999999999999988654322211111 1  1111123344566778999999999


Q ss_pred             CCCcccChHHHHHHHHhhhhcCC
Q 021331          269 GWKPEFDLVEGLADSYNLDFGRG  291 (314)
Q Consensus       269 g~~~~~~~~~~l~~~~~~~~~~~  291 (314)
                      ||+|+++++++|+++++||+...
T Consensus       316 gw~P~~~l~e~i~~ti~w~~~n~  338 (361)
T d1kewa_         316 GWKPLETFESGIRKTVEWYLANT  338 (361)
T ss_dssp             CCCCSCCHHHHHHHHHHHHHHCH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHhH
Confidence            99999999999999999998863

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=5.7e-40  Score=284.85  Aligned_cols=281  Identities=20%  Similarity=0.203  Sum_probs=220.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||+|++|+++|+++||+|++++|........+.............+++++.+|..|...+.....  .++.|+|++
T Consensus        22 TG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~~~v~~~~   99 (341)
T d1sb8a_          22 TGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GVDYVLHQA   99 (341)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc--ccccccccc
Confidence            799999999999999999999999997443211000000000001113679999999999998888877  999999998


Q ss_pred             CC----------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHH-
Q 021331           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLE-  133 (314)
Q Consensus        81 ~~----------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~-  133 (314)
                      +.                |+.++.+++++|.  ++++|||+||..+||.....|..|        .|+.+|..+|.++. 
T Consensus       100 a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  179 (341)
T d1sb8a_         100 ALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADV  179 (341)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHH
Confidence            75                3456889999988  778999999999999776655555        68999999998874 


Q ss_pred             ---hcCCceEEEecCeeeCCCCC-----CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-cCCc
Q 021331          134 ---SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQ  204 (314)
Q Consensus       134 ---~~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-~~~~  204 (314)
                         ..+++++++||+.||||+..     ..++..++..+..++++.+++++.+.++|+|++|+|.++..++..+. ..++
T Consensus       180 ~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~  259 (341)
T d1sb8a_         180 FSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQ  259 (341)
T ss_dssp             HHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSE
T ss_pred             HHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhccccccce
Confidence               45799999999999998642     34677888899999999888999999999999999999999887743 3678


Q ss_pred             eEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHH
Q 021331          205 VFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSY  284 (314)
Q Consensus       205 ~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~  284 (314)
                      +|+++++..+|+.|+++.+.+.++.+.......+ . .    ...++........|++|+++.|||.|+++++++|++++
T Consensus       260 ~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~-~-~----~~~~~~~~~~~~~d~~k~~~~LGw~p~~sl~~gi~~ti  333 (341)
T d1sb8a_         260 VYNIAVGGRTSLNQLFFALRDGLAENGVSYHREP-V-Y----RDFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAM  333 (341)
T ss_dssp             EEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCC-E-E----ECCCTTCCSBCCBCCHHHHHHTCCCCCCCHHHHHHHHH
T ss_pred             eeeecccccchHHHHHHHHHHHhccccccccccc-c-c----cCCCCCCcCeeeeCHHHHHHHHCCCcCCCHHHHHHHHH
Confidence            9999999999999999999999986542211111 0 0    01122233455679999999999999999999999999


Q ss_pred             hhhhc
Q 021331          285 NLDFG  289 (314)
Q Consensus       285 ~~~~~  289 (314)
                      +||++
T Consensus       334 ~wy~~  338 (341)
T d1sb8a_         334 PWYIM  338 (341)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99986

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.3e-39  Score=278.30  Aligned_cols=274  Identities=22%  Similarity=0.292  Sum_probs=212.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh-ccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      ||||||||++|++.|+++|++|++++|..........     ..+. ...++.++++|++|.+.+.++++..++|+|||+
T Consensus         6 tG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           6 TGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLP-----VIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHH-----HHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHH-----HHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            7999999999999999999999999875433211110     1111 135799999999999999999998889999999


Q ss_pred             CCC----------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC---------ccccchhhHHHHH
Q 021331           80 NGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE---------SRHKGKLNTESVL  132 (314)
Q Consensus        80 a~~----------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e---------~~~~~k~~~e~~~  132 (314)
                      |+.                |+.++.+++++|+  ++++||++||..+|+.....+..+         .|+.+|..+|+++
T Consensus        81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~  160 (338)
T d1udca_          81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHH
Confidence            986                2456889999997  889999999999997554332222         6899999999987


Q ss_pred             Hh-----cCCceEEEecCeeeCCCCC-----------CchhHHHHHHHHcC-CCeecCC------CCCceeeeeeHHHHH
Q 021331          133 ES-----KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKAG-RPIPIPG------SGIQVTQLGHVKDLA  189 (314)
Q Consensus       133 ~~-----~~~~~~ilR~~~v~g~~~~-----------~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~i~~~D~a  189 (314)
                      .+     .+++++++|++.+|||+..           ..+++.++...... .++.++|      ++.+.++++|+.|++
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~  240 (338)
T d1udca_         161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA  240 (338)
T ss_dssp             HHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHH
T ss_pred             HHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehh
Confidence            53     4789999999999998532           22455555555443 3555544      367789999999999


Q ss_pred             HHHHHHhcC--CccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhh
Q 021331          190 RAFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHV  267 (314)
Q Consensus       190 ~~~~~~l~~--~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  267 (314)
                      +++..+...  ....+++||+++++++|+.|+++.+.+.+|.+. .+...+.          .+.......+|++|+++.
T Consensus       241 ~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~-~~~~~~~----------~~~~~~~~~~d~~k~~~~  309 (338)
T d1udca_         241 DGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPV-NYHFAPR----------REGDLPAYWADASKADRE  309 (338)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCC-CEEEECC----------CTTCCSBCCBCCHHHHHH
T ss_pred             hhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCC-ceEECCC----------CCCCCCEeeECHHHHHHH
Confidence            888776653  233467999999999999999999999999765 4443332          122334566899999999


Q ss_pred             cCCCcccChHHHHHHHHhhhhcC
Q 021331          268 LGWKPEFDLVEGLADSYNLDFGR  290 (314)
Q Consensus       268 lg~~~~~~~~~~l~~~~~~~~~~  290 (314)
                      |||+|+++++++|+++++|++++
T Consensus       310 lgwkp~~~l~egi~~ti~w~~~~  332 (338)
T d1udca_         310 LNWRVTRTLDEMAQDTWHWQSRH  332 (338)
T ss_dssp             HCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             HCCCcCCCHHHHHHHHHHHHHhc
Confidence            99999999999999999999885

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=6.3e-39  Score=280.58  Aligned_cols=263  Identities=19%  Similarity=0.214  Sum_probs=210.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|+++|+++||+|+++++.........           ....++..+|+.+.+.+.++++  ++|+|||+|
T Consensus        21 TGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~--~~d~Vih~a   87 (363)
T d2c5aa1          21 TGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-----------MFCDEFHLVDLRVMENCLKVTE--GVDHVFNLA   87 (363)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-----------GTCSEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhh-----------cccCcEEEeechhHHHHHHHhh--cCCeEeecc
Confidence            799999999999999999999999987654421111           2456888999999999999888  999999998


Q ss_pred             CCC-----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC---------------ccccchh
Q 021331           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE---------------SRHKGKL  126 (314)
Q Consensus        81 ~~~-----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e---------------~~~~~k~  126 (314)
                      +..                 ..++.++++++.  ++++||++||..+|+.....+..+               .|+.+|.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~  167 (363)
T d2c5aa1          88 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL  167 (363)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred             cccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHH
Confidence            653                 345788899887  889999999999998543322211               5999999


Q ss_pred             hHHHHHH----hcCCceEEEecCeeeCCCCCC------chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          127 NTESVLE----SKGVNWTSLRPVYIYGPLNYN------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       127 ~~e~~~~----~~~~~~~ilR~~~v~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      .+|++++    .++++++++||+.+|||++..      ..................++++.+.++|+|++|++++++.++
T Consensus       168 ~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~  247 (363)
T d2c5aa1         168 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT  247 (363)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHH
Confidence            9999875    468999999999999987431      122233344455566677789999999999999999999998


Q ss_pred             cCCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccCh
Q 021331          197 GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDL  276 (314)
Q Consensus       197 ~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~  276 (314)
                      +.+  .+++||+++++.+|+.|+++.+.+.+|.+. .+...+..           .......+|++|++++|||.|++++
T Consensus       248 ~~~--~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~-~i~~~~~~-----------~~~~~~~~d~ska~~~LGw~p~~sl  313 (363)
T d2c5aa1         248 KSD--FREPVNIGSDEMVSMNEMAEMVLSFEEKKL-PIHHIPGP-----------EGVRGRNSDNNLIKEKLGWAPNMRL  313 (363)
T ss_dssp             HSS--CCSCEEECCCCCEEHHHHHHHHHHTTTCCC-CEEEECCC-----------CCCSBCEECCHHHHHHHSCCCCCCH
T ss_pred             hCC--CCCeEEEecCCcccHHHHHHHHHHHhCCCC-ceEeCCCC-----------CCccccccCHHHHHHHhCCCCCCCH
Confidence            765  368999999999999999999999999876 44444322           1234455799999999999999999


Q ss_pred             HHHHHHHHhhhhcC
Q 021331          277 VEGLADSYNLDFGR  290 (314)
Q Consensus       277 ~~~l~~~~~~~~~~  290 (314)
                      +++|+++++|++++
T Consensus       314 eegi~~ti~w~~~~  327 (363)
T d2c5aa1         314 KEGLRITYFWIKEQ  327 (363)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999998664

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1.3e-38  Score=273.87  Aligned_cols=275  Identities=20%  Similarity=0.207  Sum_probs=214.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccc-cCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      ||||||||++|+++|+++||+|++++|..+... ..+      .......+++++.+|++|.+.+.+.+....+++++|+
T Consensus         6 tG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l------~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~   79 (321)
T d1rpna_           6 TGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRL------RELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNL   79 (321)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHH------HHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHH------HHhcccCCcEEEEccccChHHhhhhhccccccccccc
Confidence            799999999999999999999999999765421 000      0001136899999999999999999987788999999


Q ss_pred             CCC----------------CcccHHHHHHhCC--C-CCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHH
Q 021331           80 NGR----------------EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVL  132 (314)
Q Consensus        80 a~~----------------~~~~~~~~~~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~  132 (314)
                      ++.                |..++.+++++|.  + .++|++.||..+|+.....+..|        .|+.+|..+|+++
T Consensus        80 a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  159 (321)
T d1rpna_          80 AAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWIT  159 (321)
T ss_dssp             CSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             cccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHH
Confidence            875                2456788999987  4 45788888988887654443333        6899999999987


Q ss_pred             H----hcCCceEEEecCeeeCCCCCCch----hHHHHHHHHcC-CCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCC
Q 021331          133 E----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  203 (314)
Q Consensus       133 ~----~~~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~  203 (314)
                      .    .++++++++||+.+|||......    +..++.++..+ .+...+|++++.++|+|++|+|+++..+++++.  +
T Consensus       160 ~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~--~  237 (321)
T d1rpna_         160 VNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--A  237 (321)
T ss_dssp             HHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--C
T ss_pred             HHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCC--c
Confidence            5    46899999999999999643322    23334444443 444456889999999999999999999998865  5


Q ss_pred             ceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHH
Q 021331          204 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADS  283 (314)
Q Consensus       204 ~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~  283 (314)
                      +.||+++++..|+.++++.+.+.+|.+.+.+...++...       ++.....+..|++|++++|||.|+++++++|+++
T Consensus       238 ~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-------rp~~~~~~~~d~~k~~k~lG~~P~~~l~e~i~~t  310 (321)
T d1rpna_         238 DDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFF-------RPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMM  310 (321)
T ss_dssp             CCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGC-------CSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHH
T ss_pred             CCceecccccceehhhhHHHHHHhCCCccceeecCCCCC-------CCCccCCccCCHHHHHHHHCCCcCCCHHHHHHHH
Confidence            789999999999999999999999986544444443322       2334456678999999999999999999999999


Q ss_pred             HhhhhcC
Q 021331          284 YNLDFGR  290 (314)
Q Consensus       284 ~~~~~~~  290 (314)
                      ++|++++
T Consensus       311 v~~~l~~  317 (321)
T d1rpna_         311 VEADLRR  317 (321)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998763

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.9e-38  Score=275.29  Aligned_cols=278  Identities=19%  Similarity=0.204  Sum_probs=214.5

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHH-hhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS-SLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~-~~~~~~~d~vi~   78 (314)
                      ||||||||++|+++|+++| ++|+++++..........          ..+++++.+|+++.+.+.+ +++  ++|+|||
T Consensus         6 TG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~----------~~~~~~i~~Di~~~~~~~~~~~~--~~d~Vih   73 (342)
T d2blla1           6 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP   73 (342)
T ss_dssp             ETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT----------CTTEEEEECCTTTCSHHHHHHHH--HCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc----------CCCeEEEECccCChHHHHHHHHh--CCCcccc
Confidence            7999999999999999998 589999987665433333          3689999999998766655 555  8999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC-CCCcEEEEeeceeeccCCCCCccC---------------ccccchh
Q 021331           79 INGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCE---------------SRHKGKL  126 (314)
Q Consensus        79 ~a~~~----------------~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e---------------~~~~~k~  126 (314)
                      +|+..                ..++.++++++. ...++++.||..+|+........+               .|+.+|.
T Consensus        74 ~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~  153 (342)
T d2blla1          74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ  153 (342)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHH
T ss_pred             ccccccccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhccc
Confidence            99862                456888999988 555778999999987553322211               4888999


Q ss_pred             hHHHHHH----hcCCceEEEecCeeeCCCCC---------CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHH
Q 021331          127 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  193 (314)
Q Consensus       127 ~~e~~~~----~~~~~~~ilR~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  193 (314)
                      .+|+++.    .++++++++|++.+|||...         ......++.+++.++++.+++++++.++++|++|+|+++.
T Consensus       154 ~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~  233 (342)
T d2blla1         154 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY  233 (342)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHH
T ss_pred             chhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceee
Confidence            9999884    45899999999999998532         2246678888889999998899999999999999999999


Q ss_pred             HHhcCCc--cCCceEEecCCc-cccHHHHHHHHHHHhCCCCCeeeecCCccccc-CCC----CcccCCCcceeecHHhHH
Q 021331          194 QVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKAAGFPEPELVHYNPKEFDF-GKK----KAFPFRDQHFFASVEKAK  265 (314)
Q Consensus       194 ~~l~~~~--~~~~~~~i~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~k~~  265 (314)
                      .+++++.  ..+++||+++++ .+|+.|+++.+.+.+|... .....+...... ...    ............|++|++
T Consensus       234 ~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  312 (342)
T d2blla1         234 RIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP-LRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAH  312 (342)
T ss_dssp             HHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCT-TGGGSCCCCCEEEC------------CCCCCBCCHHHH
T ss_pred             eehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCc-cccccCcccccceeccccccccccccccccccCHHHHH
Confidence            9998743  357899998765 5899999999999999765 333333222211 000    011112234457999999


Q ss_pred             hhcCCCcccChHHHHHHHHhhhhcCC
Q 021331          266 HVLGWKPEFDLVEGLADSYNLDFGRG  291 (314)
Q Consensus       266 ~~lg~~~~~~~~~~l~~~~~~~~~~~  291 (314)
                      ++|||+|+++++++|+++++||+++.
T Consensus       313 ~~lgw~P~~sleegl~~ti~~y~~~~  338 (342)
T d2blla1         313 RCLDWEPKIDMQETIDETLDFFLRTV  338 (342)
T ss_dssp             HHHCCCCCCCHHHHHHHHHHHHHHHS
T ss_pred             HHHCCCcCCCHHHHHHHHHHHHHhCc
Confidence            99999999999999999999997754

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1.1e-37  Score=270.98  Aligned_cols=273  Identities=19%  Similarity=0.236  Sum_probs=215.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh-ccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      ||||||||++|+++|+++|++|.++.++.........     .+.. ...+++++.+|++|.+.+.+++.  +++.|+|+
T Consensus         8 TGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~-----~~~~~~~~~i~~~~~Di~d~~~~~~~~~--~~~~v~~~   80 (346)
T d1oc2a_           8 TGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKA-----NLEAILGDRVELVVGDIADAELVDKLAA--KADAIVHY   80 (346)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGG-----GTGGGCSSSEEEEECCTTCHHHHHHHHT--TCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHH-----HHHHhhcCCeEEEEccCCCHHHHHHHHh--hhhhhhhh
Confidence            7999999999999999999887666554321110000     0001 13689999999999999999998  89999999


Q ss_pred             CCC----------------CcccHHHHHHhCC-CCCcEEEEeeceeeccCCC------------CCccC--------ccc
Q 021331           80 NGR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDL------------LPHCE--------SRH  122 (314)
Q Consensus        80 a~~----------------~~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~------------~~~~e--------~~~  122 (314)
                      |+.                |..++.++++++. ...++|++||..+||....            .+..+        .|+
T Consensus        81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~  160 (346)
T d1oc2a_          81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS  160 (346)
T ss_dssp             CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred             hhcccccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCCCHHH
Confidence            876                2346888999888 4468999999999974210            01111        499


Q ss_pred             cchhhHHHHHH----hcCCceEEEecCeeeCCCCC-CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          123 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       123 ~~k~~~e~~~~----~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      .+|..+|.+++    ..+++++++||+.||||+.. ...+..++.....+.++.+++++++.++++|++|+|++++.++.
T Consensus       161 ~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~  240 (346)
T d1oc2a_         161 STKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILT  240 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHh
Confidence            99999998874    46899999999999999753 45667777778888888888999999999999999999999888


Q ss_pred             CCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCccc-Ch
Q 021331          198 NEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF-DL  276 (314)
Q Consensus       198 ~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~-~~  276 (314)
                      ++. .++.|+++++++.++.++++.+.+.++.+...+...+..          +.....+.+|++|++++|||.|++ +|
T Consensus       241 ~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------~~~~~~~~~d~~k~~~~LGw~P~~t~l  309 (346)
T d1oc2a_         241 KGR-MGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDR----------AGHDLRYAIDASKLRDELGWTPQFTDF  309 (346)
T ss_dssp             HCC-TTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCC----------TTCCCBCCBCCHHHHHHHCCCCSCCCH
T ss_pred             hcc-cCccccccccccccchHHHHHHHHHhCCCCcceEECCCC----------CCCCceeeeCHHHHHHHHCCCCcCCCH
Confidence            765 577999999999999999999999999876444433321          223345668999999999999997 69


Q ss_pred             HHHHHHHHhhhhcCC
Q 021331          277 VEGLADSYNLDFGRG  291 (314)
Q Consensus       277 ~~~l~~~~~~~~~~~  291 (314)
                      +++|+++++|++++.
T Consensus       310 ~e~i~~ti~w~~~n~  324 (346)
T d1oc2a_         310 SEGLEETIQWYTDNQ  324 (346)
T ss_dssp             HHHHHHHHHHHHHTH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999999864

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-37  Score=268.56  Aligned_cols=286  Identities=17%  Similarity=0.144  Sum_probs=212.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCccccc-CCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ-QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      ||||||||++|+++|+++||+|++++|..+.... .+.............+++++.+|++|++.+..++...++++++|+
T Consensus         7 TG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~v~~~   86 (347)
T d1t2aa_           7 TGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNL   86 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             ecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhcccceeeee
Confidence            7999999999999999999999999997653211 111000001111235789999999999999999988889999999


Q ss_pred             CCC----------------CcccHHHHHHhCC-----CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHH
Q 021331           80 NGR----------------EADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTES  130 (314)
Q Consensus        80 a~~----------------~~~~~~~~~~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~  130 (314)
                      ++.                |+.++.+++++++     +.++|||+||..+||.....|+.|        .|+.+|..+|+
T Consensus        87 ~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~  166 (347)
T d1t2aa_          87 GAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYW  166 (347)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             eeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            875                3346788888875     345899999999998765555554        59999999999


Q ss_pred             HHH----hcCCceEEEecCeeeCCCCCCch-----hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCcc
Q 021331          131 VLE----SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  201 (314)
Q Consensus       131 ~~~----~~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~  201 (314)
                      ++.    +++++++++||+.+|||+.....     ...+........+..++|++++.++++|++|+|+++..++.+.. 
T Consensus       167 ~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~-  245 (347)
T d1t2aa_         167 IVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE-  245 (347)
T ss_dssp             HHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS-
T ss_pred             HHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhcCC-
Confidence            874    46899999999999999643222     22233344456667777899999999999999999999998865 


Q ss_pred             CCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCccccc-----------CCCCcccCCCcceeecHHhHHhhcCC
Q 021331          202 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDF-----------GKKKAFPFRDQHFFASVEKAKHVLGW  270 (314)
Q Consensus       202 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~k~~~~lg~  270 (314)
                       .+.|++......++.++.+.+...++... .....+......           .....++.....+.+|++|++++|||
T Consensus       246 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~skak~~Lgw  323 (347)
T d1t2aa_         246 -PEDFVIATGEVHSVREFVEKSFLHIGKTI-VWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNW  323 (347)
T ss_dssp             -CCCEEECCSCCEEHHHHHHHHHHHTTCCE-EEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCC
T ss_pred             -Cccceeccccccccchhhhhhhhhhccee-eecccchhhhhhhhhcCCceeeecccCCCCCCcCEeeECHHHHHHHHCC
Confidence             46788888899999999999999999754 222111111100           01112334445667899999999999


Q ss_pred             CcccChHHHHHHHHhhhhc
Q 021331          271 KPEFDLVEGLADSYNLDFG  289 (314)
Q Consensus       271 ~~~~~~~~~l~~~~~~~~~  289 (314)
                      .|+++++++|++++++.++
T Consensus       324 ~P~~sl~e~i~~~I~~~~~  342 (347)
T d1t2aa_         324 KPRVAFDELVREMVHADVE  342 (347)
T ss_dssp             CCCSCHHHHHHHHHHHHHH
T ss_pred             CcCCCHHHHHHHHHHHHHH
Confidence            9999999999999987554

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.5e-36  Score=262.99  Aligned_cols=281  Identities=16%  Similarity=0.129  Sum_probs=205.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhh-hccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      ||||||||++|+++|+++||+|++++|..+.......+....... -....+.++.+|+++.+.+.+.++..++|+|||+
T Consensus         7 TGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D~Vih~   86 (339)
T d1n7ha_           7 TGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYNL   86 (339)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             eCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccchhhhc
Confidence            799999999999999999999999999764321111000000000 1135688999999999999999987789999999


Q ss_pred             CCCC----------------cccHHHHHHhCC-------CCCcEEEEeeceeeccCCCCCccC--------ccccchhhH
Q 021331           80 NGRE----------------ADEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNT  128 (314)
Q Consensus        80 a~~~----------------~~~~~~~~~~~~-------~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~  128 (314)
                      |+..                ..++.++++++.       ...++++.||..+|+... .+..|        .|+.+|..+
T Consensus        87 Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~-~~~~E~~~~~p~~~Y~~sK~~~  165 (339)
T d1n7ha_          87 AAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP-PPQSETTPFHPRSPYAASKCAA  165 (339)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC-SSBCTTSCCCCCSHHHHHHHHH
T ss_pred             cccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCC-CCCCCCCCCCCcchhhHHHHHH
Confidence            9873                223556666654       344678888887776432 22222        699999999


Q ss_pred             HHHH----HhcCCceEEEecCeeeCCCCCCchhH----H-HHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          129 ESVL----ESKGVNWTSLRPVYIYGPLNYNPVEE----W-FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       129 e~~~----~~~~~~~~ilR~~~v~g~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      |+++    +.++++++++||+.||||+....+..    . +........+..+.|++.+.++++|++|+|+++..++.++
T Consensus       166 E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~  245 (339)
T d1n7ha_         166 HWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQE  245 (339)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHhcC
Confidence            9886    45789999999999999975433222    2 2222334445555688999999999999999999999987


Q ss_pred             ccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHH
Q 021331          200 KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEG  279 (314)
Q Consensus       200 ~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~  279 (314)
                      .  ...+++..+...+..++++.+.+.++.............       .++.....+.+|++|++++|||.|+++++++
T Consensus       246 ~--~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~d~~Kak~~LGw~P~~~le~g  316 (339)
T d1n7ha_         246 K--PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRY-------FRPAEVDNLQGDASKAKEVLGWKPQVGFEKL  316 (339)
T ss_dssp             S--CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGG-------SCSSCCCBCCBCCHHHHHHHCCCCCSCHHHH
T ss_pred             C--CCccccccccccccchhhhhhhhhhhcccCceeeeccCC-------CCCCCCCeeeECHHHHHHHHCCCcCCCHHHH
Confidence            5  456667777889999999999999997653333333222       1333445667899999999999999999999


Q ss_pred             HHHHHhhhhcCC
Q 021331          280 LADSYNLDFGRG  291 (314)
Q Consensus       280 l~~~~~~~~~~~  291 (314)
                      |+++++|+++..
T Consensus       317 i~~ti~~~~~~~  328 (339)
T d1n7ha_         317 VKMMVDEDLELA  328 (339)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999988753

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-36  Score=263.24  Aligned_cols=280  Identities=18%  Similarity=0.182  Sum_probs=210.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCC-chhhhh-ccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES-DQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      ||||||||++|+++|+++|++|+++++............. .+.+.. ...++.++++|++|.+.+.+++....+++++|
T Consensus         8 TG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~~~i~h   87 (346)
T d1ek6a_           8 TGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIH   87 (346)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEEEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccccccccc
Confidence            7999999999999999999999999874333111111000 011111 14679999999999999999998888999999


Q ss_pred             cCCCC----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC---------ccccchhhHHHH
Q 021331           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE---------SRHKGKLNTESV  131 (314)
Q Consensus        79 ~a~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e---------~~~~~k~~~e~~  131 (314)
                      +|+..                +.++.++++++.  ++++|+|+||..+|+.....+...         +|+.+|..+|+.
T Consensus        88 ~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~  167 (346)
T d1ek6a_          88 FAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM  167 (346)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHH
T ss_pred             cccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHHHHHHHHH
Confidence            99862                345788999987  889999999999997543221111         588999999987


Q ss_pred             HHh-----cCCceEEEecCeeeCCCCC-----------CchhHHHHHHHHc-CCCeecC------CCCCceeeeeeHHHH
Q 021331          132 LES-----KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKA-GRPIPIP------GSGIQVTQLGHVKDL  188 (314)
Q Consensus       132 ~~~-----~~~~~~ilR~~~v~g~~~~-----------~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~i~~~D~  188 (314)
                      +.+     .+++++++||+.+|||...           ..++..++..+.. +.++.++      .++.+.++++|++|+
T Consensus       168 ~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~  247 (346)
T d1ek6a_         168 IRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDL  247 (346)
T ss_dssp             HHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHH
T ss_pred             HHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEec
Confidence            653     4799999999999998531           2244555554443 4444443      346678999999999


Q ss_pred             HHHHHHHhcC--CccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHh
Q 021331          189 ARAFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKH  266 (314)
Q Consensus       189 a~~~~~~l~~--~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  266 (314)
                      |+++..++..  ....+++||+++++.+|+.|+++.+.+.+|.+. .+...+.          ++.......+|++|+++
T Consensus       248 a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~-~~~~~~~----------~~~e~~~~~~d~~k~~~  316 (346)
T d1ek6a_         248 AKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKI-PYKVVAR----------REGDVAACYANPSLAQE  316 (346)
T ss_dssp             HHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCC-CEEEECC----------CTTCCSEECBCCHHHHH
T ss_pred             cchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCC-CeEECCC----------CCCCCCEeeECHHHHHH
Confidence            9998887654  223567999999999999999999999999865 3333332          22334556689999999


Q ss_pred             hcCCCcccChHHHHHHHHhhhhcCC
Q 021331          267 VLGWKPEFDLVEGLADSYNLDFGRG  291 (314)
Q Consensus       267 ~lg~~~~~~~~~~l~~~~~~~~~~~  291 (314)
                      .|||+|+++++++|+++++|++++.
T Consensus       317 ~lgw~p~~slee~I~~~i~w~~~n~  341 (346)
T d1ek6a_         317 ELGWTAALGLDRMCEDLWRWQKQNP  341 (346)
T ss_dssp             TTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             HHCCCcCCCHHHHHHHHHHHHHhCH
Confidence            9999999999999999999999854

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.6e-36  Score=260.67  Aligned_cols=274  Identities=19%  Similarity=0.217  Sum_probs=203.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh-ccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      ||||||||++|+++|+++|++|+++++..........     .... ...+++++++|++|.+.+++++...++|+|||+
T Consensus         7 TGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~-----~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           7 TGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVA-----RLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHH-----HHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHH-----hHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            7999999999999999999999999864332110000     0000 136799999999999999999988899999999


Q ss_pred             CCCC----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCC----CCccC--------ccccchhhHH
Q 021331           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL----LPHCE--------SRHKGKLNTE  129 (314)
Q Consensus        80 a~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~----~~~~e--------~~~~~k~~~e  129 (314)
                      |+..                ..++.+++++|+  ++++||++||..+||....    .+..|        .|+.+|..+|
T Consensus        82 Aa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E  161 (347)
T d1z45a2          82 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIE  161 (347)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             cccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHH
Confidence            9863                345788999988  8899999999999975321    22222        5999999999


Q ss_pred             HHHHh------cCCceEEEecCeeeCCCCC-----------CchhHHHHHHHHc-CCCeecCCCC------CceeeeeeH
Q 021331          130 SVLES------KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKA-GRPIPIPGSG------IQVTQLGHV  185 (314)
Q Consensus       130 ~~~~~------~~~~~~ilR~~~v~g~~~~-----------~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~i~~  185 (314)
                      +++..      .+++++++||+.+||+...           ..+++.+...+.. ..++.++|++      ...++++++
T Consensus       162 ~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~  241 (347)
T d1z45a2         162 NILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHV  241 (347)
T ss_dssp             HHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEH
T ss_pred             HHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeee
Confidence            98743      4689999999999997421           1245555544443 3456665554      446788899


Q ss_pred             HHHHHHHHHHhcC------CccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceee
Q 021331          186 KDLARAFVQVLGN------EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFA  259 (314)
Q Consensus       186 ~D~a~~~~~~l~~------~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (314)
                      .|.+.+++.+++.      ....+++||+++++++|+.|+++.+.+.+|.+. .+...+.          ++.......+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~-~~~~~~~----------~~~~~~~~~~  310 (347)
T d1z45a2         242 VDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDL-PYKVTGR----------RAGDVLNLTA  310 (347)
T ss_dssp             HHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCC-CC-------------------CCCCCB
T ss_pred             ecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCC-ceEeCCC----------CCCCCCEeeE
Confidence            9999988887763      122467999999999999999999999999865 3222211          1223345568


Q ss_pred             cHHhHHhhcCCCcccChHHHHHHHHhhhhcC
Q 021331          260 SVEKAKHVLGWKPEFDLVEGLADSYNLDFGR  290 (314)
Q Consensus       260 ~~~k~~~~lg~~~~~~~~~~l~~~~~~~~~~  290 (314)
                      |++|++++|||.|+++++++|+++++|++++
T Consensus       311 d~sk~~~~lGw~p~~~lee~i~~ti~w~~~n  341 (347)
T d1z45a2         311 KPDRAKRELKWQTELQVEDSCKDLWKWTTEN  341 (347)
T ss_dssp             CCHHHHHHTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHCCCCCCCHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999975

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.2e-35  Score=262.29  Aligned_cols=281  Identities=17%  Similarity=0.170  Sum_probs=206.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCc---cc----ccCCCCCCc----hhhhh-ccCceEEEEecCCChhhHHHhh
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKA---PI----AQQLPGESD----QEFAE-FSSKILHLKGDRKDYDFVKSSL   68 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~---~~----~~~~~~~~~----~~~~~-~~~~~~~~~~D~~d~~~l~~~~   68 (314)
                      ||||||||++|+++|+++||+|++++.-..   ..    ....+....    ..+.. ...+++++.+|++|.+.+.+++
T Consensus         7 TGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~   86 (393)
T d1i24a_           7 IGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESF   86 (393)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHHHHHHH
Confidence            799999999999999999999999972110   00    000000000    01111 1357999999999999999999


Q ss_pred             hcCCccEEEEcCCC-------------------CcccHHHHHHhCC--CC-CcEEEEeeceeeccCCCC-----------
Q 021331           69 SAKGFDVVYDINGR-------------------EADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLL-----------  115 (314)
Q Consensus        69 ~~~~~d~vi~~a~~-------------------~~~~~~~~~~~~~--~~-~~~i~~Ss~~v~~~~~~~-----------  115 (314)
                      +..++|+|||+|+.                   |+.++.+++++|.  +. +++++.||..+|+.....           
T Consensus        87 ~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~  166 (393)
T d1i24a_          87 KSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHN  166 (393)
T ss_dssp             HHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSEEEEEET
T ss_pred             HhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccccccccccc
Confidence            97789999999975                   2446888999987  44 467788888777643211           


Q ss_pred             --------CccC--ccccchhhHHHHH----HhcCCceEEEecCeeeCCCCC------------------CchhHHHHHH
Q 021331          116 --------PHCE--SRHKGKLNTESVL----ESKGVNWTSLRPVYIYGPLNY------------------NPVEEWFFHR  163 (314)
Q Consensus       116 --------~~~e--~~~~~k~~~e~~~----~~~~~~~~ilR~~~v~g~~~~------------------~~~~~~~~~~  163 (314)
                              |..+  .|+.+|..+|.++    ++++++++++||+.+|||+..                  ..++..++.+
T Consensus       167 ~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  246 (393)
T d1i24a_         167 GRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQ  246 (393)
T ss_dssp             TEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHH
T ss_pred             ccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccchhhhhHH
Confidence                    1111  4999999999887    467899999999999998642                  1246678888


Q ss_pred             HHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEe-cCCccccHHHHHHHHHHHhCCCCC--eeeecCCc
Q 021331          164 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGEKYVTFDGLARACAKAAGFPEP--ELVHYNPK  240 (314)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i-~~~~~~s~~el~~~i~~~~g~~~~--~~~~~~~~  240 (314)
                      ...++++.++|++.+.++|+|++|+|+++..++.++...+..+.+ .+++.+|+.|+++.+.+..+....  .....+.+
T Consensus       247 ~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~~~~~~~~~  326 (393)
T d1i24a_         247 AAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKKMTVPNP  326 (393)
T ss_dssp             HHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCCCEEEECCS
T ss_pred             hhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCCcceeeccCC
Confidence            889999999999999999999999999999999886655543332 445679999999999998653221  22222211


Q ss_pred             ccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHhhhhcC
Q 021331          241 EFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGR  290 (314)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~~~~~  290 (314)
                              ..+.....+..|++|+++ |||.|+++++++++++++|+.+.
T Consensus       327 --------~~~~~~~~~~~d~~k~~~-LGw~P~~~~~~~i~~~~~~~~~~  367 (393)
T d1i24a_         327 --------RVEAEEHYYNAKHTKLME-LGLEPHYLSDSLLDSLLNFAVQF  367 (393)
T ss_dssp             --------SCSCSSCCCCBCCCHHHH-TTCCCCCCCHHHHHHHHHHHHHT
T ss_pred             --------CCCCCccEecCCHHHHHH-cCCccccCHHHHHHHHHHHHHHH
Confidence                    123344566778999975 99999999999999999997763

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.5e-35  Score=254.11  Aligned_cols=253  Identities=21%  Similarity=0.296  Sum_probs=201.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|+++|+++|+.|+++++..+                         +|+.|.+.+.++++...+|.|+|++
T Consensus         8 TG~tGfiG~~l~~~L~~~g~~vi~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~d~v~~~a   62 (315)
T d1e6ua_           8 AGHRGMVGSAIRRQLEQRGDVELVLRTRDE-------------------------LNLLDSRAVHDFFASERIDQVYLAA   62 (315)
T ss_dssp             ETTTSHHHHHHHHHHTTCTTEEEECCCTTT-------------------------CCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EcCCcHHHHHHHHHHHHCcCEEEEecCchh-------------------------ccccCHHHHHHHHhhcCCCEEEEcc
Confidence            799999999999999999999887654321                         3788999999999877899999998


Q ss_pred             CC-----------------CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC-------------ccccchhhH
Q 021331           81 GR-----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE-------------SRHKGKLNT  128 (314)
Q Consensus        81 ~~-----------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e-------------~~~~~k~~~  128 (314)
                      +.                 |+.++.+++++|.  ++++|||+||.++||.....|..|             .|+.+|..+
T Consensus        63 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  142 (315)
T d1e6ua_          63 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAG  142 (315)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHH
T ss_pred             hhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHH
Confidence            65                 2345788999987  889999999999998665444433             499999999


Q ss_pred             HHHHH----hcCCceEEEecCeeeCCCCCC-----chhH-----HHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHH
Q 021331          129 ESVLE----SKGVNWTSLRPVYIYGPLNYN-----PVEE-----WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       129 e~~~~----~~~~~~~ilR~~~v~g~~~~~-----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                      |+++.    +++++++++||+.||||++..     .+..     ........+.++.+++++.+.++++|++|+++++..
T Consensus       143 E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~  222 (315)
T d1e6ua_         143 IKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIH  222 (315)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHH
Confidence            99874    568999999999999997532     1222     223344556777788889999999999999999999


Q ss_pred             HhcCCc--------cCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHh
Q 021331          195 VLGNEK--------ASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKH  266 (314)
Q Consensus       195 ~l~~~~--------~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  266 (314)
                      ++.+..        .....++++.+...+..++++.+.+.+|.+. .+...+.          ++.......+|++|++ 
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~-~i~~~~~----------~~~~~~~~~~d~sk~k-  290 (315)
T d1e6ua_         223 VMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKG-RVVFDAS----------KPDGTPRKLLDVTRLH-  290 (315)
T ss_dssp             HHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCS-EEEEETT----------SCCCCSBCCBCCHHHH-
T ss_pred             hhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCc-ceEECCC----------CCCCCceeccCHHHHH-
Confidence            986632        2356899999999999999999999999876 5443322          1222334567999997 


Q ss_pred             hcCCCcccChHHHHHHHHhhhhcC
Q 021331          267 VLGWKPEFDLVEGLADSYNLDFGR  290 (314)
Q Consensus       267 ~lg~~~~~~~~~~l~~~~~~~~~~  290 (314)
                      +|||.|+++++++|+++++||+++
T Consensus       291 ~Lg~~p~~~l~e~i~~ti~w~~~N  314 (315)
T d1e6ua_         291 QLGWYHEISLEAGLASTYQWFLEN  314 (315)
T ss_dssp             HTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred             HcCCCCCCCHHHHHHHHHHHHHHc
Confidence            599999999999999999999864

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=5.4e-35  Score=252.71  Aligned_cols=272  Identities=18%  Similarity=0.292  Sum_probs=203.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccc-cCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      ||||||||++|+++|+++||+|+++++-..... ..+      .......+++++.+|++|.+.+.++++..++|+|||+
T Consensus         6 TGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~------~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~   79 (338)
T d1orra_           6 TGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNL------HWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL   79 (338)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHH------HHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHH------HHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEee
Confidence            799999999999999999999999975322211 000      0011136899999999999999999987788999999


Q ss_pred             CCC----------------CcccHHHHHHhCC--CCCcEEEEeeceee-ccCCCCCc----------------------c
Q 021331           80 NGR----------------EADEVEPILDALP--NLEQFIYCSSAGVY-LKSDLLPH----------------------C  118 (314)
Q Consensus        80 a~~----------------~~~~~~~~~~~~~--~~~~~i~~Ss~~v~-~~~~~~~~----------------------~  118 (314)
                      |+.                |+.++.++++++.  +++++|+.||..++ +.....+.                      .
T Consensus        80 aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (338)
T d1orra_          80 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD  159 (338)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred             cccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccc
Confidence            986                3456889999988  67776666665443 32211110                      0


Q ss_pred             --CccccchhhHHHHH----HhcCCceEEEecCeeeCCCCC----CchhHHHHHHHH-----cCCCeecCCCCCceeeee
Q 021331          119 --ESRHKGKLNTESVL----ESKGVNWTSLRPVYIYGPLNY----NPVEEWFFHRLK-----AGRPIPIPGSGIQVTQLG  183 (314)
Q Consensus       119 --e~~~~~k~~~e~~~----~~~~~~~~ilR~~~v~g~~~~----~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i  183 (314)
                        ..|+.+|...|.+.    +.++...+++|++.+|++...    ......++..+.     .++++.++|++.+.++++
T Consensus       160 ~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~  239 (338)
T d1orra_         160 FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVL  239 (338)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECE
T ss_pred             cccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeee
Confidence              04667787777775    457899999999999987532    234455555443     366788889999999999


Q ss_pred             eHHHHHHHHHHHhcCCc-cCCceEEecC--CccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeec
Q 021331          184 HVKDLARAFVQVLGNEK-ASRQVFNISG--EKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFAS  260 (314)
Q Consensus       184 ~~~D~a~~~~~~l~~~~-~~~~~~~i~~--~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (314)
                      |++|++++++.+++++. ..+++|++..  +..+++.|+++.+.+.+|.+. .+...+.          ++.....+..|
T Consensus       240 ~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~-~~~~~~~----------~~~~~~~~~~d  308 (338)
T d1orra_         240 HAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDM-RFTNLPV----------RESDQRVFVAD  308 (338)
T ss_dssp             EHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCC-CEEEECC----------CSSCCSEECBC
T ss_pred             cccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCc-eeEeCCC----------CCCCcCeeeEC
Confidence            99999999999998743 3678999854  456899999999999999865 4444332          12233456679


Q ss_pred             HHhHHhhcCCCcccChHHHHHHHHhhhhc
Q 021331          261 VEKAKHVLGWKPEFDLVEGLADSYNLDFG  289 (314)
Q Consensus       261 ~~k~~~~lg~~~~~~~~~~l~~~~~~~~~  289 (314)
                      ++|++++|||+|+++++++|+++++|++.
T Consensus       309 ~~k~~~~Lg~~p~~sl~e~i~~ti~W~k~  337 (338)
T d1orra_         309 IKKITNAIDWSPKVSAKDGVQKMYDWTSS  337 (338)
T ss_dssp             CHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCcCCCHHHHHHHHHHHHHc
Confidence            99999999999999999999999999863

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=4.1e-34  Score=251.56  Aligned_cols=279  Identities=21%  Similarity=0.306  Sum_probs=201.2

Q ss_pred             CCcccccHHHHHHHHHH-CCCeEEEEEcCCcccccCCCCCCch----h--------hhhccCceEEEEecCCChhhHHHh
Q 021331            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQ----E--------FAEFSSKILHLKGDRKDYDFVKSS   67 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~----~--------~~~~~~~~~~~~~D~~d~~~l~~~   67 (314)
                      ||||||||++|+++|++ .||+|+++++-..............    .        .......+.++.+|++|++.+.++
T Consensus         8 TG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~   87 (383)
T d1gy8a_           8 CGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGV   87 (383)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHHhhhh
Confidence            79999999999999986 5899999985221100000000000    0        000124688999999999999999


Q ss_pred             hhcC-CccEEEEcCCCC----------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCC-------CCccC--
Q 021331           68 LSAK-GFDVVYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL-------LPHCE--  119 (314)
Q Consensus        68 ~~~~-~~d~vi~~a~~~----------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~-------~~~~e--  119 (314)
                      ++.. ++|+|||+|+..                ..++.++++++.  +++++++.||..+|+....       .+..+  
T Consensus        88 ~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~e~~  167 (383)
T d1gy8a_          88 FTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINA  167 (383)
T ss_dssp             HHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTTS
T ss_pred             hhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccccccccc
Confidence            9765 469999999863                345778888887  7889999999888864322       11111  


Q ss_pred             ------ccccchhhHHHHHH----hcCCceEEEecCeeeCCCCCC----------chhHHHHHHHH--------------
Q 021331          120 ------SRHKGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN----------PVEEWFFHRLK--------------  165 (314)
Q Consensus       120 ------~~~~~k~~~e~~~~----~~~~~~~ilR~~~v~g~~~~~----------~~~~~~~~~~~--------------  165 (314)
                            .|+.+|..+|.+++    .++++++++||+.+|||+...          .+.+.++.++.              
T Consensus       168 ~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~  247 (383)
T d1gy8a_         168 KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHED  247 (383)
T ss_dssp             CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--------
T ss_pred             CCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhh
Confidence                  69999999999885    468999999999999997532          12333333322              


Q ss_pred             --cCCCeecCC------CCCceeeeeeHHHHHHHHHHHhcCC--------ccCCceEEecCCccccHHHHHHHHHHHhCC
Q 021331          166 --AGRPIPIPG------SGIQVTQLGHVKDLARAFVQVLGNE--------KASRQVFNISGEKYVTFDGLARACAKAAGF  229 (314)
Q Consensus       166 --~~~~~~~~~------~~~~~~~~i~~~D~a~~~~~~l~~~--------~~~~~~~~i~~~~~~s~~el~~~i~~~~g~  229 (314)
                        .+.++.++|      ++.+.++|+|++|+|++++.++++.        ...+++||+++++++|+.|+++.+.+.+|.
T Consensus       248 ~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~i~~~~~~  327 (383)
T d1gy8a_         248 ASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGH  327 (383)
T ss_dssp             ---CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCC
T ss_pred             hhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHHHHHHHhCC
Confidence              233344433      4677899999999999999988642        224579999999999999999999999998


Q ss_pred             CCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHH-HhhhhcC
Q 021331          230 PEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADS-YNLDFGR  290 (314)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~-~~~~~~~  290 (314)
                      +. .+...+.          ++........|++|++++|||+|+++++++|+++ ++|++.+
T Consensus       328 ~~-~~~~~~~----------~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~  378 (383)
T d1gy8a_         328 PI-PVRECGR----------REGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH  378 (383)
T ss_dssp             CC-CEEEECC----------CTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred             CC-ceEECCC----------CCCCcCEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHHHhC
Confidence            76 3333322          2223355677999999999999999999999997 4777664

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=100.00  E-value=3.2e-34  Score=241.60  Aligned_cols=249  Identities=16%  Similarity=0.126  Sum_probs=202.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|+++|.++||+|++++|+.                          +|+.|.++++++++..++|+|||++
T Consensus         7 tGasGfiG~~l~~~L~~~g~~Vi~~~r~~--------------------------~D~~d~~~~~~~l~~~~~d~vih~a   60 (281)
T d1vl0a_           7 TGANGQLGREIQKQLKGKNVEVIPTDVQD--------------------------LDITNVLAVNKFFNEKKPNVVINCA   60 (281)
T ss_dssp             ESTTSHHHHHHHHHHTTSSEEEEEECTTT--------------------------CCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEeechh--------------------------ccCCCHHHHHHHHHHcCCCEEEeec
Confidence            79999999999999999999999998752                          3788999999999878899999999


Q ss_pred             CCCcc----------------cHHHHHHhCC-CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHHhc
Q 021331           81 GREAD----------------EVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLESK  135 (314)
Q Consensus        81 ~~~~~----------------~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~~~  135 (314)
                      +....                ...++++.+. ....+++.||..+|+.....|..|        .|+.+|...|+++++.
T Consensus        61 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~  140 (281)
T d1vl0a_          61 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKAL  140 (281)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccchhhcccccccccccccccccccccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHHh
Confidence            87431                2334444454 556888999999988765555444        5788899999999999


Q ss_pred             CCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecCCcccc
Q 021331          136 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  215 (314)
Q Consensus       136 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~~~~~s  215 (314)
                      +.+++++||+++|||+.  .+...++..+..+..+.+.+  +..++++|++|+++++..++++..  .++||+++++.+|
T Consensus       141 ~~~~~i~R~~~vyG~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~--~g~~~~~~~~~~s  214 (281)
T d1vl0a_         141 NPKYYIVRTAWLYGDGN--NFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKN--YGTFHCTCKGICS  214 (281)
T ss_dssp             CSSEEEEEECSEESSSS--CHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTC--CEEEECCCBSCEE
T ss_pred             CCCccccceeEEeCCCc--ccccchhhhhccCCceeecC--Cceeccchhhhhhhhhhhhhhhcc--cCceeEeCCCccc
Confidence            99999999999999963  46667777787887776654  578999999999999999998765  4699999999999


Q ss_pred             HHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHhhhh
Q 021331          216 FDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDF  288 (314)
Q Consensus       216 ~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~~~  288 (314)
                      +.|+++.+.+.+|.+. .+.+++...+..  .+.+|   .+..+|++|+++.|||.|+ +++++|++++++++
T Consensus       215 ~~e~~~~i~~~~g~~~-~i~~i~~~~~~~--~a~rp---~~~~ld~~k~~~~~g~~~~-~~~~~l~~~l~~l~  280 (281)
T d1vl0a_         215 WYDFAVEIFRLTGIDV-KVTPCTTEEFPR--PAKRP---KYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQ  280 (281)
T ss_dssp             HHHHHHHHHHHHCCCC-EEEEECSTTSCC--SSCCC---SBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHhCCCc-eEEeccHHHcCC--cCCCc---cccccCHHHHHHHhCCCCC-CHHHHHHHHHHHhc
Confidence            9999999999999886 777666444322  11122   3445799999999999998 99999999999864

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=100.00  E-value=4.4e-33  Score=242.54  Aligned_cols=272  Identities=16%  Similarity=0.195  Sum_probs=199.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|+++|+++|++|++++|+.+.....+.      ......+++++.+|++|++.+.++++...+|+|+|++
T Consensus        14 TG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~------~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~a   87 (356)
T d1rkxa_          14 TGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFE------TARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA   87 (356)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHH------HTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHh------hhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhhh
Confidence            7999999999999999999999999998765332110      0011357999999999999999999877899999999


Q ss_pred             CCC----------------cccHHHHHHhCC---CCCcEEEEeeceeeccCCC-CCccC--------ccccchhhHHHHH
Q 021331           81 GRE----------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSDL-LPHCE--------SRHKGKLNTESVL  132 (314)
Q Consensus        81 ~~~----------------~~~~~~~~~~~~---~~~~~i~~Ss~~v~~~~~~-~~~~e--------~~~~~k~~~e~~~  132 (314)
                      +..                ..++.++++++.   ....+++.|+..++..... .+..+        .|+.+|...|..+
T Consensus        88 a~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~  167 (356)
T d1rkxa_          88 AQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVT  167 (356)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHH
T ss_pred             ccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccchhhh
Confidence            863                345788999886   4445555555555432221 11111        4777788777665


Q ss_pred             H-------------hcCCceEEEecCeeeCCCCC--CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          133 E-------------SKGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       133 ~-------------~~~~~~~ilR~~~v~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      .             .+++.++++||+.+|||++.  ..+++.++..+..+.++ +++.+.+.++++|++|+|+++..++.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~v~D~~~a~~~~~~  246 (356)
T d1rkxa_         168 SSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPV-IIRNPHAIRPWQHVLEPLSGYLLLAQ  246 (356)
T ss_dssp             HHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCE-ECSCTTCEECCEETHHHHHHHHHHHH
T ss_pred             hHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCce-EEeeccccccccccccccchhhhhhh
Confidence            3             34688999999999999863  34667777776665554 45788899999999999999998887


Q ss_pred             CCcc----CCce--EEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCC
Q 021331          198 NEKA----SRQV--FNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWK  271 (314)
Q Consensus       198 ~~~~----~~~~--~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~  271 (314)
                      ++..    .+..  +....+..+++.++++.+.+.++... .+.....         ..+.....+.+|++|++++|||.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~---------~~~~~~~~~~~d~skak~~LGw~  316 (356)
T d1rkxa_         247 KLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGA-SWQLDGN---------AHPHEAHYLKLDCSKAKMQLGWH  316 (356)
T ss_dssp             HHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTC-CEEC----------------CCCCCCBCCHHHHHHHCCC
T ss_pred             hhcccccccccccccccccccccccchhhhhhHHHhCCCc-cEEEcCC---------CCCCCcCeeeEcHHHHHHHHCCC
Confidence            6332    2223  33344567999999999999999765 3332211         12233455668999999999999


Q ss_pred             cccChHHHHHHHHhhhhc
Q 021331          272 PEFDLVEGLADSYNLDFG  289 (314)
Q Consensus       272 ~~~~~~~~l~~~~~~~~~  289 (314)
                      |+++++++|+++++||+.
T Consensus       317 P~~~l~egi~~ti~wyk~  334 (356)
T d1rkxa_         317 PRWNLNTTLEYIVGWHKN  334 (356)
T ss_dssp             CCCCHHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHH
Confidence            999999999999999886

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.97  E-value=1.2e-30  Score=225.72  Aligned_cols=270  Identities=13%  Similarity=0.036  Sum_probs=188.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|+++|+++||+|+++.|+.++.......   ............+.+|+.|.+.+.+++.  ++|+|+|++
T Consensus        17 TG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~~~v~~~a   91 (342)
T d1y1pa1          17 TGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKR---WDAKYPGRFETAVVEDMLKQGAYDEVIK--GAAGVAHIA   91 (342)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH---HHHHSTTTEEEEECSCTTSTTTTTTTTT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHh---hhccccccccEEEeccccchhhhhhhcc--cchhhhhhc
Confidence            79999999999999999999999999986542110000   0000011334557789999999999998  999999998


Q ss_pred             CC-------------CcccHHHHHHhCC---CCCcEEEEeeceeeccCC----CCCc----------------cC-----
Q 021331           81 GR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSD----LLPH----------------CE-----  119 (314)
Q Consensus        81 ~~-------------~~~~~~~~~~~~~---~~~~~i~~Ss~~v~~~~~----~~~~----------------~e-----  119 (314)
                      +.             |+.++.+++++|.   ++++|||+||..++....    ....                .+     
T Consensus        92 ~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~  171 (342)
T d1y1pa1          92 SVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQK  171 (342)
T ss_dssp             CCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTH
T ss_pred             ccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCCCC
Confidence            86             3456889999875   688999999975432111    0000                00     


Q ss_pred             ---ccccchhhHHHHHH----hc--CCceEEEecCeeeCCCC----CCchhHHHHHHHHcCCCeecCCCCCceeeeeeHH
Q 021331          120 ---SRHKGKLNTESVLE----SK--GVNWTSLRPVYIYGPLN----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  186 (314)
Q Consensus       120 ---~~~~~k~~~e~~~~----~~--~~~~~ilR~~~v~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  186 (314)
                         .|+.+|..+|+++.    ++  +++++++||+.+|||..    .......++..+..++..... .+.+.++++|++
T Consensus       172 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~v~v~  250 (342)
T d1y1pa1         172 SLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL-ALMPPQYYVSAV  250 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH-HTCCSEEEEEHH
T ss_pred             CcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCccc-CCccceeeeeHH
Confidence               59999999998653    33  46788999999999852    233566777777777765442 345668999999


Q ss_pred             HHHHHHHHHhcCCccCCceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHh
Q 021331          187 DLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKH  266 (314)
Q Consensus       187 D~a~~~~~~l~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  266 (314)
                      |+|++++.++.++...+ .|++++++.+|+.|+++.|.+.++... -...++...        ......... .+.+..+
T Consensus       251 Dva~~~i~~l~~~~~~g-~~~~~~~~~~t~~eia~~i~k~~p~~~-~~~~~~~~~--------~~~~~~~~~-~s~~~~k  319 (342)
T d1y1pa1         251 DIGLLHLGCLVLPQIER-RRVYGTAGTFDWNTVLATFRKLYPSKT-FPADFPDQG--------QDLSKFDTA-PSLEILK  319 (342)
T ss_dssp             HHHHHHHHHHHCTTCCS-CEEEECCEEECHHHHHHHHHHHCTTSC-CCCCCCCCC--------CCCCEECCH-HHHHHHH
T ss_pred             HHHHHHHHhhcCccccc-eEEEEcCCceEHHHHHHHHHHHcCCCc-CCccCCccC--------cccccccch-HHHHHHH
Confidence            99999999998876544 566788889999999999999985322 111111110        011111111 2344456


Q ss_pred             hcCCCcccChHHHHHHHHhhh
Q 021331          267 VLGWKPEFDLVEGLADSYNLD  287 (314)
Q Consensus       267 ~lg~~~~~~~~~~l~~~~~~~  287 (314)
                      .|||.+.++++++|+++++.+
T Consensus       320 ~lg~~~~~~lee~i~d~I~s~  340 (342)
T d1y1pa1         320 SLGRPGWRSIEESIKDLVGSE  340 (342)
T ss_dssp             HTTCCSCCCHHHHHHHHHCCS
T ss_pred             HcCCCCCcCHHHHHHHHHHhC
Confidence            699999999999999999864

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=3.4e-30  Score=219.22  Aligned_cols=264  Identities=17%  Similarity=0.121  Sum_probs=166.9

Q ss_pred             CCcccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHH-Hhhh---cCCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK-SSLS---AKGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~-~~~~---~~~~d~   75 (314)
                      ||||||||++|+++|+++|+ +|+++++-...... .            ...+....|..+.+.+. ..+.   -..+++
T Consensus         5 TGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~-~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (307)
T d1eq2a_           5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V------------NLVDLNIADYMDKEDFLIQIMAGEEFGDVEA   71 (307)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-H------------HHHTSCCSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             ecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchh-h------------cccccchhhhccchHHHHHHhhhhcccchhh
Confidence            79999999999999999995 79888743322110 0            00001112222222222 2221   126899


Q ss_pred             EEEcCCCC--------------cccHHHHHHhCC-CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHH
Q 021331           76 VYDINGRE--------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVL  132 (314)
Q Consensus        76 vi~~a~~~--------------~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~  132 (314)
                      |+|+|+..              ...+.++++++. ...++++.||..++......+..+        .|+.+|..+|.++
T Consensus        72 i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~  151 (307)
T d1eq2a_          72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYV  151 (307)
T ss_dssp             EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHH
T ss_pred             hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhc
Confidence            99998752              334667777777 334678888877775443322221        6899999999887


Q ss_pred             H----hcCCceEEEecCeeeCCCCC-----CchhHHHHHHHHcCCCee-cCCCCCceeeeeeHHHHHHHHHHHhcCCccC
Q 021331          133 E----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIP-IPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  202 (314)
Q Consensus       133 ~----~~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~  202 (314)
                      +    +++++++++||+.+|||+..     ..+...+..++..++... +.|++...++++|++|+++++..++.++.  
T Consensus       152 ~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~--  229 (307)
T d1eq2a_         152 RQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--  229 (307)
T ss_dssp             HHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--
T ss_pred             cccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc--
Confidence            5    56899999999999999753     234555666676666543 45778888999999999999999998754  


Q ss_pred             CceEEecCCccccHHHHHHHHHHHhCCCCCeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHH
Q 021331          203 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLAD  282 (314)
Q Consensus       203 ~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~  282 (314)
                      .+.|++++++..|+.|+++.+.+..+.......+.+...        ..........|++|+++.+||.|+++++++|++
T Consensus       230 ~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~~~--------~~~~~~~~~~d~~k~~~~~~~~p~~sl~egi~~  301 (307)
T d1eq2a_         230 SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKL--------KGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTE  301 (307)
T ss_dssp             CEEEEESCSCCBCHHHHHHHC-----------------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHH
T ss_pred             ccccccccccchhHHHHHHHHHHhcCCCCeeEeeCCccC--------CCCCceeeecCHHHHHHHHCCCCCCCHHHHHHH
Confidence            579999999999999999999887764332222222111        111123334689999999999999999999999


Q ss_pred             HHhhh
Q 021331          283 SYNLD  287 (314)
Q Consensus       283 ~~~~~  287 (314)
                      +++|+
T Consensus       302 ~i~w~  306 (307)
T d1eq2a_         302 YMAWL  306 (307)
T ss_dssp             HHHHT
T ss_pred             HHHhC
Confidence            99984

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.96  E-value=1.5e-29  Score=214.34  Aligned_cols=258  Identities=16%  Similarity=0.114  Sum_probs=190.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      ||||||||++|++.|.++|+ +++++++...                      +.+|++|.+.++++++..++|+|||+|
T Consensus         6 tG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~----------------------~~~Dl~~~~~~~~~i~~~~~D~Vih~A   62 (298)
T d1n2sa_           6 FGKTGQVGWELQRSLAPVGN-LIALDVHSKE----------------------FCGDFSNPKGVAETVRKLRPDVIVNAA   62 (298)
T ss_dssp             ECTTSHHHHHHHHHTTTTSE-EEEECTTCSS----------------------SCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCC-EEEEECCCcc----------------------ccCcCCCHHHHHHHHHHcCCCEEEEec
Confidence            79999999999999999886 4555554332                      136899999999999877899999999


Q ss_pred             CCC----------------cccHHHHHHhCC-CCCcEEEEeeceeeccCCCCCccC--------ccccchhhHHHHHHhc
Q 021331           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCE--------SRHKGKLNTESVLESK  135 (314)
Q Consensus        81 ~~~----------------~~~~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e--------~~~~~k~~~e~~~~~~  135 (314)
                      |..                ...+.++++++. ...+++++||..+|+.....|..|        .|+.+|..+|+++..+
T Consensus        63 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~  142 (298)
T d1n2sa_          63 AHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDN  142 (298)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCccccccccccccccchhhhhccccccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHhh
Confidence            863                334678888887 556899999999987666665555        6889999999999887


Q ss_pred             CCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC---CccCCceEEecCCc
Q 021331          136 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN---EKASRQVFNISGEK  212 (314)
Q Consensus       136 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~---~~~~~~~~~i~~~~  212 (314)
                      .....++|++..++.... .....+...+.....+...  ++...+++|+.|+++++..++..   ....+++||+++++
T Consensus       143 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~~  219 (298)
T d1n2sa_         143 CPKHLIFRTSWVYAGKGN-NFAKTMLRLAKERQTLSVI--NDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGG  219 (298)
T ss_dssp             CSSEEEEEECSEECSSSC-CHHHHHHHHHHHCSEEEEE--CSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBS
T ss_pred             hcccccccccceeeccCC-ccchhhhhhhcccceeecc--cceeecccccchHHHHHHHHHhhhhccccccccccccCCC
Confidence            777778877777654332 2344555666666666553  45678999999999999888753   33357899999999


Q ss_pred             cccHHHHHHHHHHHhCCCC-----CeeeecCCcccccCCCCcccCCCcceeecHHhHHhhcCCCcccChHHHHHHHHhhh
Q 021331          213 YVTFDGLARACAKAAGFPE-----PELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLD  287 (314)
Q Consensus       213 ~~s~~el~~~i~~~~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~~~~~~~~~l~~~~~~~  287 (314)
                      .++..++++.+.+..+...     ..+...+...+..  .+.+   +.+..+|++|+++.|||+|+ +++++|+++++++
T Consensus       220 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~--~a~R---P~~~~ld~~K~~~~~~~~~~-~~~~gl~~~i~~~  293 (298)
T d1n2sa_         220 TTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPT--PASR---PGNSRLNTEKFQRNFDLILP-QWELGVKRMLTEM  293 (298)
T ss_dssp             CEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCC--SSCC---CSBCCBCCHHHHHHHTCCCC-BHHHHHHHHHHHH
T ss_pred             ceecHHHHHHHHhhhhccCccccccceeeeehhhcCc--cCCC---ccccccCHHHHHHHHCCCCC-cHHHHHHHHHHHH
Confidence            9999999999988764322     1222222222111  1112   23446899999999999998 9999999999987


Q ss_pred             hcC
Q 021331          288 FGR  290 (314)
Q Consensus       288 ~~~  290 (314)
                      +..
T Consensus       294 ~~~  296 (298)
T d1n2sa_         294 FTT  296 (298)
T ss_dssp             HSC
T ss_pred             Hhh
Confidence            654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.95  E-value=2.9e-28  Score=207.61  Aligned_cols=232  Identities=12%  Similarity=0.066  Sum_probs=174.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh-ccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      ||||||+|++|+++|+++||+|++++|+........    ...+.. ...+++++.+|+.|.+.+..++.  ++++++++
T Consensus         9 tGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~----~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~--~~~~~~~~   82 (312)
T d1qyda_           9 VGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDK----VQMLLYFKQLGAKLIEASLDDHQRLVDALK--QVDVVISA   82 (312)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHH----HHHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhH----HHHHhhhccCCcEEEEeecccchhhhhhcc--Ccchhhhh
Confidence            799999999999999999999999999765421000    000111 13679999999999999999998  99999998


Q ss_pred             CCC-----CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC--ccccchhhHHHHHHhcCCceEEEecCeeeCC
Q 021331           80 NGR-----EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE--SRHKGKLNTESVLESKGVNWTSLRPVYIYGP  150 (314)
Q Consensus        80 a~~-----~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e--~~~~~k~~~e~~~~~~~~~~~ilR~~~v~g~  150 (314)
                      ++.     +...+.++++++.  ...++++.||.++++.....+...  .+...+..++++....+++++++||+.+||+
T Consensus        83 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~g~  162 (312)
T d1qyda_          83 LAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGY  162 (312)
T ss_dssp             CCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECCEEHHH
T ss_pred             hhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhhhhHHHHHHHHhhcccccceEEeccceeecC
Confidence            765     3456777777766  667888889877765543333222  4667778888888899999999999999996


Q ss_pred             CCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCce-EEecCCccccHHHHHHHHHHHhCC
Q 021331          151 LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV-FNISGEKYVTFDGLARACAKAAGF  229 (314)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~-~~i~~~~~~s~~el~~~i~~~~g~  229 (314)
                      .... +..........++.+.+++++++.++++|++|+|++++.++.++...++. |++++++.+|+.|+++.+++++|.
T Consensus       163 ~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~  241 (312)
T d1qyda_         163 FAGS-LAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQ  241 (312)
T ss_dssp             HTTT-SSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred             Cccc-hhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHHCC
Confidence            4321 11111111234456677789999999999999999999999987766655 566666789999999999999998


Q ss_pred             CCCeeeecCCc
Q 021331          230 PEPELVHYNPK  240 (314)
Q Consensus       230 ~~~~~~~~~~~  240 (314)
                      +. .+..++..
T Consensus       242 ~~-~~~~i~~~  251 (312)
T d1qyda_         242 NL-DKIYISSQ  251 (312)
T ss_dssp             CC-EECCBCSH
T ss_pred             CC-eEEECCHH
Confidence            76 66666654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.8e-27  Score=188.76  Aligned_cols=183  Identities=18%  Similarity=0.246  Sum_probs=149.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||||++|++++++|+++||+|++++|++++......           .+++++.+|++|++++.++++  ++|+|||++
T Consensus         9 ~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~-----------~~~~~~~gD~~d~~~l~~al~--~~d~vi~~~   75 (205)
T d1hdoa_           9 FGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-----------RPAHVVVGDVLQAADVDKTVA--GQDAVIVLL   75 (205)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSC-----------CCSEEEESCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccc-----------cccccccccccchhhHHHHhc--CCCEEEEEe
Confidence            6999999999999999999999999999877443332           679999999999999999999  999999998


Q ss_pred             CCC---------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccC-ccccchhhHHHHHHhcCCceEEEecCeee
Q 021331           81 GRE---------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE-SRHKGKLNTESVLESKGVNWTSLRPVYIY  148 (314)
Q Consensus        81 ~~~---------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e-~~~~~k~~~e~~~~~~~~~~~ilR~~~v~  148 (314)
                      |..         ..++++++++++  +++|||++||.+++.+....+... .+...|..+|+++++.+++|+++||+.++
T Consensus        76 g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~tiirp~~~~  155 (205)
T d1hdoa_          76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIG  155 (205)
T ss_dssp             CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHHTCSEEEEECCSEEE
T ss_pred             ccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccccccccccchHHHHHHHHHHhcCCceEEEecceec
Confidence            763         234778999988  899999999999887665444322 46677888999999999999999999998


Q ss_pred             CCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecC
Q 021331          149 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG  210 (314)
Q Consensus       149 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~  210 (314)
                      +....             +. ..++.++.....+++.+|+|++++.+++++...|+.+.++.
T Consensus       156 ~~~~~-------------~~-~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s~  203 (205)
T d1hdoa_         156 DQPLT-------------GA-YTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH  203 (205)
T ss_dssp             CCCCC-------------SC-CEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred             CCCCc-------------cc-EEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecCC
Confidence            74221             11 22233455667899999999999999999887788887764

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.94  E-value=8.2e-28  Score=203.94  Aligned_cols=232  Identities=15%  Similarity=0.159  Sum_probs=172.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      ||||||+|+++++.|+++||+|++++|+.........   ...+... ..+++++.+|+.+...+...+.  +++.++|+
T Consensus         9 tGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~vi~~   83 (307)
T d1qyca_           9 IGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEK---AQLLESFKASGANIVHGSIDDHASLVEAVK--NVDVVIST   83 (307)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHH---HHHHHHHHTTTCEEECCCTTCHHHHHHHHH--TCSEEEEC
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhH---HHHHHhhccCCcEEEEeecccchhhhhhhh--hceeeeec
Confidence            7999999999999999999999999998655211100   0011111 3578999999999999999998  99999999


Q ss_pred             CCC-CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCC-CccCccccchhhHHHHHHhcCCceEEEecCeeeCCCCCCc
Q 021331           80 NGR-EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLL-PHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNP  155 (314)
Q Consensus        80 a~~-~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~-~~~e~~~~~k~~~e~~~~~~~~~~~ilR~~~v~g~~~~~~  155 (314)
                      ++. +...+.++++++.  +++++++.|+.+........ +....+...+...+.++.+.+++++++||+.+||++... 
T Consensus        84 ~~~~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~v~g~~~~~-  162 (307)
T d1qyca_          84 VGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRS-  162 (307)
T ss_dssp             CCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEEHHHHTTT-
T ss_pred             ccccccchhhHHHHHHHHhccccceeeeccccccccccccccccccccccccccchhhccCCCceecccceecCCCccc-
Confidence            865 4556678888876  77888888876554332211 111145556677888888999999999999999974321 


Q ss_pred             hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCce-EEecCCccccHHHHHHHHHHHhCCCCCee
Q 021331          156 VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV-FNISGEKYVTFDGLARACAKAAGFPEPEL  234 (314)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~-~~i~~~~~~s~~el~~~i~~~~g~~~~~~  234 (314)
                       +..+......+....+++.+++.++++|++|+|++++.++.++...++. |++++++.+|+.|+++.+.+++|.+. ++
T Consensus       163 -~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~-~~  240 (307)
T d1qyca_         163 -LAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTL-EK  240 (307)
T ss_dssp             -TTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCC-EE
T ss_pred             -hhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCCCC-cE
Confidence             1112222334455666788999999999999999999999987665554 56677789999999999999999876 66


Q ss_pred             eecCCc
Q 021331          235 VHYNPK  240 (314)
Q Consensus       235 ~~~~~~  240 (314)
                      ..++.+
T Consensus       241 ~~~~~~  246 (307)
T d1qyca_         241 AYVPEE  246 (307)
T ss_dssp             EEECHH
T ss_pred             EECCHH
Confidence            666654

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.6e-26  Score=185.83  Aligned_cols=186  Identities=18%  Similarity=0.199  Sum_probs=145.1

Q ss_pred             CCcccccHHHHHHHHHHCCC--eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      ||||||+|++|+++|+++|+  +|++++|++.......           ...+....+|+.+.+.+.++++  ++|++||
T Consensus        20 tGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-----------~~~i~~~~~D~~~~~~~~~~~~--~~d~vi~   86 (232)
T d2bkaa1          20 LGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----------YKNVNQEVVDFEKLDDYASAFQ--GHDVGFC   86 (232)
T ss_dssp             ECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----------GGGCEEEECCGGGGGGGGGGGS--SCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-----------cceeeeeeeccccccccccccc--ccccccc
Confidence            79999999999999999984  8999999875532211           3678888999999999999998  9999999


Q ss_pred             cCCCC-------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCc-eEEE
Q 021331           79 INGRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVN-WTSL  142 (314)
Q Consensus        79 ~a~~~-------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~-~~il  142 (314)
                      +++..             ...+.+++++|.  ++++||++||.++++.+..     .|..+|..+|+.+++.+++ ++||
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~~~-----~Y~~~K~~~E~~l~~~~~~~~~Il  161 (232)
T d2bkaa1          87 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNF-----LYLQVKGEVEAKVEELKFDRYSVF  161 (232)
T ss_dssp             CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSS-----HHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             cccccccccchhhhhhhcccccceeeecccccCccccccCCccccccCccc-----hhHHHHHHhhhccccccccceEEe
Confidence            99863             234677888876  8899999999988765432     4899999999999998875 9999


Q ss_pred             ecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCceEEecC
Q 021331          143 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG  210 (314)
Q Consensus       143 R~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~i~~  210 (314)
                      ||+.+||++........+........     .........|+++|+|++++.++.++. .++++.+.+
T Consensus       162 RP~~i~G~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~I~~~dvA~a~i~~~~~~~-~~~~~i~~~  223 (232)
T d2bkaa1         162 RPGVLLCDRQESRPGEWLVRKFFGSL-----PDSWASGHSVPVVTVVRAMLNNVVRPR-DKQMELLEN  223 (232)
T ss_dssp             ECCEEECTTGGGSHHHHHHHHHHCSC-----CTTGGGGTEEEHHHHHHHHHHHHTSCC-CSSEEEEEH
T ss_pred             cCceeecCCCcCcHHHHHHHHHhhcc-----CCcccCCCeEEHHHHHHHHHHHHhcCc-cCCeEEEcH
Confidence            99999999765544444444443322     222333457999999999999988766 355666654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.89  E-value=3.3e-23  Score=179.19  Aligned_cols=226  Identities=14%  Similarity=0.083  Sum_probs=165.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCccccc-CCCCCCchhhhhccCceEEEEecCCChh-hHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ-QLPGESDQEFAEFSSKILHLKGDRKDYD-FVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~-~l~~~~~~~~~d~vi~   78 (314)
                      ||||||+|++|+++|+++||+|++++|+.+.... .+.         ...+++++.+|+.|+. .+..++.  ++|++++
T Consensus         9 tGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~---------~~~~v~~~~gD~~d~~~~~~~a~~--~~~~~~~   77 (350)
T d1xgka_           9 VGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ---------AIPNVTLFQGPLLNNVPLMDTLFE--GAHLAFI   77 (350)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHH---------TSTTEEEEESCCTTCHHHHHHHHT--TCSEEEE
T ss_pred             ECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhc---------ccCCCEEEEeeCCCcHHHHHHHhc--CCceEEe
Confidence            7999999999999999999999999998765321 110         1368999999999864 5677887  8888887


Q ss_pred             cCCC----CcccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCceEEEecCeeeCCCC
Q 021331           79 INGR----EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLN  152 (314)
Q Consensus        79 ~a~~----~~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~~~ilR~~~v~g~~~  152 (314)
                      ....    +...+.++++++.  +++++++.||..........+. ..+..+|...+.++.+.+++++++|++.+++...
T Consensus        78 ~~~~~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~vr~~~~~~~~~  156 (350)
T d1xgka_          78 NTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPA-VPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFT  156 (350)
T ss_dssp             CCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCC-CTTTHHHHHHHHHHHTSSSCEEEEEECEEGGGCB
T ss_pred             ecccccchhhhhhhHHHHHHHHhCCCceEEEeeccccccCCcccc-hhhhhhHHHHHHHHHhhccCceeeeeceeecccc
Confidence            6543    3456788999987  8888898998765543332222 2467788999999999999999999999887531


Q ss_pred             C--CchhHHHHHHHHcCC-CeecCCCCCceeeeeeH-HHHHHHHHHHhcCCc--cCCceEEecCCccccHHHHHHHHHHH
Q 021331          153 Y--NPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHV-KDLARAFVQVLGNEK--ASRQVFNISGEKYVTFDGLARACAKA  226 (314)
Q Consensus       153 ~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~-~D~a~~~~~~l~~~~--~~~~~~~i~~~~~~s~~el~~~i~~~  226 (314)
                      .  .+.+.  ......+. ....+..++....++++ +|+++++..++.++.  ..|++|++++ +.+|+.|+++.+.++
T Consensus       157 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g-~~~T~~eia~~l~~~  233 (350)
T d1xgka_         157 SLPYPLFQ--MELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRA  233 (350)
T ss_dssp             SSSCSSCB--EEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHHHHHH
T ss_pred             cccccccc--ccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeC-CcCCHHHHHHHHHHH
Confidence            1  11100  00011111 23445567778888886 799999999997542  3688999987 569999999999999


Q ss_pred             hCCCCCeeeecCCccc
Q 021331          227 AGFPEPELVHYNPKEF  242 (314)
Q Consensus       227 ~g~~~~~~~~~~~~~~  242 (314)
                      +|++. ++..+|...+
T Consensus       234 ~G~~v-~~~~vp~~~~  248 (350)
T d1xgka_         234 LNRRV-TYVQVPKVEI  248 (350)
T ss_dssp             HTSCE-EEEECSSCCC
T ss_pred             HCCcc-eEEECCHHHH
Confidence            99886 7777776543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.89  E-value=2e-23  Score=171.13  Aligned_cols=204  Identities=15%  Similarity=0.119  Sum_probs=144.1

Q ss_pred             CCcccccHHHHHHHHHHCCCe--EEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQ--VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      ||||||+|+++++.|+++|++  |++++|+++.... +           ..+++++.+|+.+.+.+.++++  ++|+|||
T Consensus         9 tGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~-~-----------~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~   74 (252)
T d2q46a1           9 TGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-I-----------GGEADVFIGDITDADSINPAFQ--GIDALVI   74 (252)
T ss_dssp             ESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH-T-----------TCCTTEEECCTTSHHHHHHHHT--TCSEEEE
T ss_pred             ECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh-c-----------cCCcEEEEeeeccccccccccc--cceeeEE
Confidence            799999999999999999965  5556777655321 1           2578899999999999999999  9999999


Q ss_pred             cCCCC-----------------------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCcc--Cccccch
Q 021331           79 INGRE-----------------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHC--ESRHKGK  125 (314)
Q Consensus        79 ~a~~~-----------------------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~--e~~~~~k  125 (314)
                      +++..                             ..++.+++..+.  ..+++.+.|+...+.........  ..|...+
T Consensus        75 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  154 (252)
T d2q46a1          75 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWK  154 (252)
T ss_dssp             CCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHH
T ss_pred             EEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcccccccccchhhhh
Confidence            98752                             234666777665  67788888886665332211111  1344556


Q ss_pred             hhHHHHHHhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccCCce
Q 021331          126 LNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV  205 (314)
Q Consensus       126 ~~~e~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~  205 (314)
                      ...+.+....+++++++||+.+||+.....-      .+..... ..   .....+++|++|+|++++.++.++...+++
T Consensus       155 ~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~------~~~~~~~-~~---~~~~~~~i~~~Dva~a~~~~l~~~~~~g~~  224 (252)
T d2q46a1         155 RKAEQYLADSGTPYTIIRAGGLLDKEGGVRE------LLVGKDD-EL---LQTDTKTVPRADVAEVCIQALLFEEAKNKA  224 (252)
T ss_dssp             HHHHHHHHHSSSCEEEEEECEEECSCTTSSC------EEEESTT-GG---GGSSCCEEEHHHHHHHHHHHTTCGGGTTEE
T ss_pred             hhhhhhhhcccccceeecceEEECCCcchhh------hhhccCc-cc---ccCCCCeEEHHHHHHHHHHHhCCccccCcE
Confidence            6666777788999999999999999642110      0001111 11   122357999999999999999998878899


Q ss_pred             EEecCCc---cccHHHHHHHHHHHhC
Q 021331          206 FNISGEK---YVTFDGLARACAKAAG  228 (314)
Q Consensus       206 ~~i~~~~---~~s~~el~~~i~~~~g  228 (314)
                      |||+++.   ..++.|+.+.+.++.+
T Consensus       225 ~~i~~~~~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         225 FDLGSKPEGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             EEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred             EEEeeCCCCCChhHHHHHHHHHHHHh
Confidence            9998753   3567777776665444

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.83  E-value=2.8e-21  Score=155.09  Aligned_cols=168  Identities=20%  Similarity=0.174  Sum_probs=117.5

Q ss_pred             CCcccccHHHHHHHHHHCCC--eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      ||||||+|++|+++|+++|+  +|++++|++....               ..+   ..+..|..++.+.+. ..+|+|||
T Consensus         8 tGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~---------------~~~---~~~~~d~~~~~~~~~-~~~d~vi~   68 (212)
T d2a35a1           8 AGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH---------------PRL---DNPVGPLAELLPQLD-GSIDTAFC   68 (212)
T ss_dssp             ECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC---------------TTE---ECCBSCHHHHGGGCC-SCCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc---------------ccc---cccccchhhhhhccc-cchheeee
Confidence            79999999999999999997  5666666543311               222   334445444444332 26899999


Q ss_pred             cCCCC--------------cccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCc-eEE
Q 021331           79 INGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVN-WTS  141 (314)
Q Consensus        79 ~a~~~--------------~~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~-~~i  141 (314)
                      ++|..              ...+.+++++|.  ++++|+++||.++++....     .|..+|..+|+++++.+.+ ++|
T Consensus        69 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~~~-----~y~~~K~~~E~~l~~~~~~~~~I  143 (212)
T d2a35a1          69 CLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSI-----FYNRVKGELEQALQEQGWPQLTI  143 (212)
T ss_dssp             CCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSS-----HHHHHHHHHHHHHTTSCCSEEEE
T ss_pred             eeeeeccccccccccccchhhhhhhccccccccccccccccccccccccccc-----chhHHHHHHhhhcccccccccee
Confidence            98763              234678888887  8899999999988754332     4889999999999988875 999


Q ss_pred             EecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          142 LRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       142 lR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      +||+.|||+.....+...    +  ..++....  .....+||++|+|++++.++.++.
T Consensus       144 ~Rp~~v~G~~~~~~~~~~----~--~~~~~~~~--~~~~~~i~v~DvA~ai~~~~~~~~  194 (212)
T d2a35a1         144 ARPSLLFGPREEFRLAEI----L--AAPIARIL--PGKYHGIEACDLARALWRLALEEG  194 (212)
T ss_dssp             EECCSEESTTSCEEGGGG----T--TCCCC------CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             eCCcceeCCcccccHHHH----H--HHHHhhcc--CCCCcEEEHHHHHHHHHHHHcCCC
Confidence            999999999654322111    1  11111101  123467999999999999998765

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.67  E-value=2.2e-16  Score=127.79  Aligned_cols=183  Identities=19%  Similarity=0.259  Sum_probs=127.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++++|+.+..                .++..+.+|++|+++++++++..     ++|+
T Consensus        13 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   76 (237)
T d1uzma1          13 TGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------------KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV   76 (237)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------TTSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCcchh----------------cCceEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            89999999999999999999999999987652                46778999999999888877643     6999


Q ss_pred             EEEcCCCCccc------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~~------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||.....                        ++.++..+.  +..++|++||.......   +....|..+|...+
T Consensus        77 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~---~~~~~Y~asKaal~  153 (237)
T d1uzma1          77 LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI---GNQANYAASKAGVI  153 (237)
T ss_dssp             EEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC--------CCHHHHHHHHHHH
T ss_pred             EEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCC---cccHHHHHHHHHHH
Confidence            99999974211                        233344444  55689999996654322   22236899998877


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       .+|+++..|.||.+..+... .+............  ++       ..+...+|+|++++.++....  
T Consensus       154 ~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~-~~~~~~~~~~~~~~--pl-------~R~~~pedvA~~v~fL~S~~s~~  223 (237)
T d1uzma1         154 GMARSIARELSKANVTANVVAPGYIDTDMTR-ALDERIQQGALQFI--PA-------KRVGTPAEVAGVVSFLASEDASY  223 (237)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-HSCHHHHHHHGGGC--TT-------CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHhhhhcCCceeeeeeeCcCCChhhh-ccCHHHHHHHHhcC--CC-------CCCcCHHHHHHHHHHHhCchhcC
Confidence            7653       46899999999988665110 01111222222211  11       236678999999999997532  


Q ss_pred             cCCceEEecCCc
Q 021331          201 ASRQVFNISGEK  212 (314)
Q Consensus       201 ~~~~~~~i~~~~  212 (314)
                      -.|+++.+.||-
T Consensus       224 itG~~i~vdGG~  235 (237)
T d1uzma1         224 ISGAVIPVDGGM  235 (237)
T ss_dssp             CCSCEEEESTTT
T ss_pred             CcCCeEEECCCC
Confidence            378899998874

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.66  E-value=3e-16  Score=127.44  Aligned_cols=190  Identities=18%  Similarity=0.197  Sum_probs=133.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++++|+.++......          .-+.+++.+|++|++++++++++.     ++|+
T Consensus        11 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   80 (242)
T d1ulsa_          11 TGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE----------AVGAHPVVMDVADPASVERGFAEALAHLGRLDG   80 (242)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----------TTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----------HcCCeEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            7999999999999999999999999998765432211          135778999999999988887643     6999


Q ss_pred             EEEcCCCCccc------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~~------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||.....                        ++.++..+.  +..+++.+||....+.+.    ...|..+|...+
T Consensus        81 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~~----~~~Y~asKaal~  156 (242)
T d1ulsa_          81 VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLG----QANYAASMAGVV  156 (242)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTT----CHHHHHHHHHHH
T ss_pred             EEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCCC----CcchHHHHHHHH
Confidence            99999974211                        334444444  445677777754433222    226899998877


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       .+|+++..|.||.+-.+... ..............++         ..+...+|+|++++.++.+..  
T Consensus       157 ~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~-~~~~~~~~~~~~~~pl---------~R~~~pedia~~v~fL~S~~s~~  226 (242)
T d1ulsa_         157 GLTRTLALELGRWGIRVNTLAPGFIETRMTA-KVPEKVREKAIAATPL---------GRAGKPLEVAYAALFLLSDESSF  226 (242)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCTTTS-SSCHHHHHHHHHTCTT---------CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHhhhCcEEEEEeeCcccChhhh-cCCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhchhhCC
Confidence            7653       46899999999999876432 2233334444443332         135568999999999997532  


Q ss_pred             cCCceEEecCCccc
Q 021331          201 ASRQVFNISGEKYV  214 (314)
Q Consensus       201 ~~~~~~~i~~~~~~  214 (314)
                      -.|+++.+.||..+
T Consensus       227 itG~~i~vDGG~t~  240 (242)
T d1ulsa_         227 ITGQVLFVDGGRTI  240 (242)
T ss_dssp             CCSCEEEESTTTTT
T ss_pred             CCCcEEEECCCccC
Confidence            37899999998653

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.66  E-value=1.3e-16  Score=130.35  Aligned_cols=194  Identities=16%  Similarity=0.226  Sum_probs=135.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++++|+.+......     .++++...++.++.+|++|++++.++++..     ++|+
T Consensus        16 TGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~-----~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   90 (251)
T d2c07a1          16 TGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVV-----DEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDI   90 (251)
T ss_dssp             ESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcee
Confidence            799999999999999999999999999876532211     133333467899999999999888877643     7999


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+|+....                    +    ++.++..+.  +..++|++||.......   |....|..+|...+
T Consensus        91 lvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~---~~~~~Y~asKaal~  167 (251)
T d2c07a1          91 LVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN---VGQANYSSSKAGVI  167 (251)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---TTCHHHHHHHHHHH
T ss_pred             eeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCC---CCCHHHHHHHHHHH
Confidence            9999987321                    1    233444444  55799999996654322   22226899998887


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       .+|+++..|.||.+-.+... .........+....++         ..+...+|+|++++.++....  
T Consensus       168 ~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~-~~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~fL~S~~s~~  237 (251)
T d2c07a1         168 GFTKSLAKELASRNITVNAIAPGFISSDMTD-KISEQIKKNIISNIPA---------GRMGTPEEVANLACFLSSDKSGY  237 (251)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTCTT---------SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHhhhhCeEEEEEccCCEeccccc-ccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCchhCC
Confidence            7754       46899999999998776322 1223333444333322         136678999999999997533  


Q ss_pred             cCCceEEecCCc
Q 021331          201 ASRQVFNISGEK  212 (314)
Q Consensus       201 ~~~~~~~i~~~~  212 (314)
                      -.|+++.+.||.
T Consensus       238 itG~~i~vDGG~  249 (251)
T d2c07a1         238 INGRVFVIDGGL  249 (251)
T ss_dssp             CCSCEEEESTTS
T ss_pred             CcCcEEEECCCc
Confidence            378899998884

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.66  E-value=1.3e-16  Score=130.56  Aligned_cols=196  Identities=14%  Similarity=0.151  Sum_probs=135.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++++|+.++.....     +++.+...++.++.+|++|+++++++++..     ++|+
T Consensus        17 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-----~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDi   91 (255)
T d1fmca_          17 TGAGAGIGKEIAITFATAGASVVVSDINADAANHVV-----DEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI   91 (255)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999876532211     233344567899999999999888777542     6999


Q ss_pred             EEEcCCCCcc-------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           76 VYDINGREAD-------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        76 vi~~a~~~~~-------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      +||+||....                   +    ++.++..+.  +..++|++||...+...   |....|..+|...+.
T Consensus        92 lvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~---~~~~~Y~asKaal~~  168 (255)
T d1fmca_          92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN---INMTSYASSKAAASH  168 (255)
T ss_dssp             EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC---TTCHHHHHHHHHHHH
T ss_pred             eeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccc---cccccchhHHHHHHH
Confidence            9999987421                   1    223333333  55688999996654322   222368989988777


Q ss_pred             HHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--c
Q 021331          131 VLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--A  201 (314)
Q Consensus       131 ~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~  201 (314)
                      +.+       .+|+++..|.||.|-.+.............+....++         ..+...+|+|++++.+++...  -
T Consensus       169 lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl---------~R~g~pedvA~~v~fL~S~~s~~i  239 (255)
T d1fmca_         169 LVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI---------RRLGQPQDIANAALFLCSPAASWV  239 (255)
T ss_dssp             HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSS---------CSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCchhcCC
Confidence            653       4689999999999876521111222333344333322         135678999999999997532  3


Q ss_pred             CCceEEecCCcc
Q 021331          202 SRQVFNISGEKY  213 (314)
Q Consensus       202 ~~~~~~i~~~~~  213 (314)
                      .|+++.+.||..
T Consensus       240 tG~~i~vDGG~~  251 (255)
T d1fmca_         240 SGQILTVSGGGV  251 (255)
T ss_dssp             CSCEEEESTTSC
T ss_pred             cCCEEEECcCcc
Confidence            789999999863

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.64  E-value=4.3e-16  Score=126.59  Aligned_cols=192  Identities=16%  Similarity=0.178  Sum_probs=133.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++++|+.+......        ++...+...+.+|++|+++++++++..     ++|+
T Consensus        10 TGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (243)
T d1q7ba_          10 TGASRGIGRAIAETLAARGAKVIGTATSENGAQAIS--------DYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI   81 (243)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--------HHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence            899999999999999999999999999876532111        112357888999999998888777642     6999


Q ss_pred             EEEcCCCCccc------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~~------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||.....                        ++.++..+.  +..++|++||...+....   ....|..+|...+
T Consensus        82 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~---~~~~Y~asKaal~  158 (243)
T d1q7ba_          82 LVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNG---GQANYAAAKAGLI  158 (243)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT---TCHHHHHHHHHHH
T ss_pred             ehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCC---CCHHHHHHHHHHH
Confidence            99999874211                        334444444  557899999976543322   2226899998877


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       .+|+++..|.||.+-.+... .........+....++         ..+...+|+|++++.++++..  
T Consensus       159 ~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~-~~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~fL~S~~s~~  228 (243)
T d1q7ba_         159 GFSKSLAREVASRGITVNVVAPGFIETDMTR-ALSDDQRAGILAQVPA---------GRLGGAQEIANAVAFLASDEAAY  228 (243)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-TSCHHHHHHHHTTCTT---------SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHhCccCeEEEEEecceEechhhh-hhhhhHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhCchhcC
Confidence            7754       46899999999987654211 1122222233322221         236678999999999997533  


Q ss_pred             cCCceEEecCCcc
Q 021331          201 ASRQVFNISGEKY  213 (314)
Q Consensus       201 ~~~~~~~i~~~~~  213 (314)
                      ..|+++.+.||..
T Consensus       229 itGq~i~vdGG~~  241 (243)
T d1q7ba_         229 ITGETLHVNGGMY  241 (243)
T ss_dssp             CCSCEEEESTTSS
T ss_pred             CcCCeEEECCCeE
Confidence            3789999998854

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.64  E-value=7.3e-16  Score=125.55  Aligned_cols=194  Identities=15%  Similarity=0.168  Sum_probs=128.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++.+|++.+...       ..+++...++.++.+|++|++++++++++.     ++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~-------~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1          11 TGGANGIGRAIAERFAVEGADIAIADLVPAPEAE-------AAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHH-------HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHH-------HHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211       123334568999999999999888877532     6999


Q ss_pred             EEEcCCCCccc------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~~------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||.....                        ++.++..+.  +..++|++||.......   |....|..+|...+
T Consensus        84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~---~~~~~Y~asKaal~  160 (247)
T d2ew8a1          84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI---EAYTHYISTKAANI  160 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC---SSCHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccC---cccccchhhhccHH
Confidence            99999974221                        334444454  55789999997654222   22236888898877


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       .+|+++..|.||.+-.+............... ..       ......+...+|+|++++.+++...  
T Consensus       161 ~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~-~~-------~~~l~r~~~pedvA~~v~fL~S~~s~~  232 (247)
T d2ew8a1         161 GFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLP-NM-------LQAIPRLQVPLDLTGAAAFLASDDASF  232 (247)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCC-------------------CT-------TSSSCSCCCTHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHH-HH-------hccCCCCCCHHHHHHHHHHHhCchhcC
Confidence            6653       46899999999988766322111111111111 00       0111235678999999999987532  


Q ss_pred             cCCceEEecCCc
Q 021331          201 ASRQVFNISGEK  212 (314)
Q Consensus       201 ~~~~~~~i~~~~  212 (314)
                      -.|+++.+.||.
T Consensus       233 itG~~i~vDGG~  244 (247)
T d2ew8a1         233 ITGQTLAVDGGM  244 (247)
T ss_dssp             CCSCEEEESSSC
T ss_pred             CcCCeEEECCCE
Confidence            378999999885

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.63  E-value=1e-15  Score=125.54  Aligned_cols=198  Identities=17%  Similarity=0.170  Sum_probs=134.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++++|+.+.....+.    +.+.....++.++.+|++|++++++++++.     ++|+
T Consensus        13 TGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~----~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDi   88 (261)
T d1geea_          13 TGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVL----EEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDV   88 (261)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            8999999999999999999999999998754221111    233334467889999999999888877642     6999


Q ss_pred             EEEcCCCCccc------------------------HHHHHHhCC--C-CCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~~------------------------~~~~~~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||.....                        ++.++..+.  + ..++|++||......   .|....|..+|...
T Consensus        89 LVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~---~~~~~~Y~asKaal  165 (261)
T d1geea_          89 MINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP---WPLFVHYAASKGGM  165 (261)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC---CTTCHHHHHHHHHH
T ss_pred             eeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhccc---CccccccccCCccc
Confidence            99999874211                        334444443  3 345888998655322   22233689999888


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                      +.+.+       .+|+++..|.||.|..|...... .......+....++         ..+...+|+|++++.++....
T Consensus       166 ~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pediA~~v~fL~S~~s  236 (261)
T d1geea_         166 KLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM---------GYIGEPEEIAAVAAWLASSEA  236 (261)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTT---------SSCBCHHHHHHHHHHHHSGGG
T ss_pred             hhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhCchh
Confidence            77754       46899999999998765211100 01122222222221         235678999999999997533


Q ss_pred             --cCCceEEecCCccc
Q 021331          201 --ASRQVFNISGEKYV  214 (314)
Q Consensus       201 --~~~~~~~i~~~~~~  214 (314)
                        ..|+++.+.||..+
T Consensus       237 ~~itG~~i~vDGG~sl  252 (261)
T d1geea_         237 SYVTGITLFADGGMTL  252 (261)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCCcCCeEEECCCeeC
Confidence              37899999998754

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.63  E-value=5.2e-16  Score=126.16  Aligned_cols=196  Identities=17%  Similarity=0.195  Sum_probs=133.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++.+++.......+.    +.+.....++.++.+|++|+++++++++..     ++|+
T Consensus         7 TGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           7 TGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVS----KQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            8999999999999999999999987765543221111    233334567889999999999888877642     6999


Q ss_pred             EEEcCCCCccc------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~~------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||.....                        ++.++..|.  +..++|++||...+-...   ....|..+|...+
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~---~~~~Y~asKaal~  159 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI---GQANYAAAKAGVI  159 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT---TCHHHHHHHHHHH
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCC---CCHHHHHHHHHHH
Confidence            99999874211                        344555554  567999999976543222   2226899998887


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh-cCC--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL-GNE--  199 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l-~~~--  199 (314)
                      .+.+       .+|+++..|.||.+-.+.. ..+.....+.+....++         ..+...+|+|++++.++ ...  
T Consensus       160 ~ltk~lA~el~~~gIrvN~I~PG~i~T~~~-~~~~~~~~~~~~~~~pl---------~R~~~p~dvA~~v~fLa~S~~a~  229 (244)
T d1edoa_         160 GFSKTAAREGASRNINVNVVCPGFIASDMT-AKLGEDMEKKILGTIPL---------GRTGQPENVAGLVEFLALSPAAS  229 (244)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCSHHH-HTTCHHHHHHHHTSCTT---------CSCBCHHHHHHHHHHHHHCSGGG
T ss_pred             HChHHHHHHHhhhCcEEEEEecceeccHHH-HHhhHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHHCCchhc
Confidence            7754       4689999999998765421 11122233333332222         23667899999999886 432  


Q ss_pred             ccCCceEEecCCcc
Q 021331          200 KASRQVFNISGEKY  213 (314)
Q Consensus       200 ~~~~~~~~i~~~~~  213 (314)
                      .-.|+++.+.||-.
T Consensus       230 ~itG~~i~vdGG~s  243 (244)
T d1edoa_         230 YITGQAFTIDGGIA  243 (244)
T ss_dssp             GCCSCEEEESTTTT
T ss_pred             CCcCCeEEeCCCee
Confidence            23788999988843

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.63  E-value=4.5e-16  Score=127.57  Aligned_cols=201  Identities=18%  Similarity=0.246  Sum_probs=133.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++++|+.+......     +++.+...++.++.+|++|+++++++++..     ++|+
T Consensus         7 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           7 TGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVA-----SEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             cCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            799999999999999999999999999876532211     233344567899999999999888877542     6999


Q ss_pred             EEEcCCCCccc------------------------HHHHHHhCC---CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREADE------------------------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~~------------------------~~~~~~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||.....                        ++.++..+.   ...++|++||...+..   .|....|..+|...
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~---~~~~~~Y~asKaal  158 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG---NPELAVYSSSKFAV  158 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC---CTTBHHHHHHHHHH
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhccc---CcccccchhCHHHH
Confidence            99999974211                        233333332   3457899998665422   22233688889887


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHc--CCCe----ecCCCCCceeeeeeHHHHHHHHHHH
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GRPI----PIPGSGIQVTQLGHVKDLARAFVQV  195 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~i~~~D~a~~~~~~  195 (314)
                      +.+.+       .+|+++..|.||.+-.|     +...+......  +...    .-.........+...+|+|++++.+
T Consensus       159 ~~ltk~lA~el~~~gIrVN~I~PG~i~T~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL  233 (255)
T d1gega_         159 RGLTQTAARDLAPLGITVNGYCPGIVKTP-----MWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYL  233 (255)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBSSH-----HHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHH
T ss_pred             HhhHHHHHHHhhhhCcEEEEEecCcccCh-----HHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            77653       46899999999987554     22222221110  0000    0000011112367799999999999


Q ss_pred             hcCCc--cCCceEEecCCccc
Q 021331          196 LGNEK--ASRQVFNISGEKYV  214 (314)
Q Consensus       196 l~~~~--~~~~~~~i~~~~~~  214 (314)
                      +....  ..|.++.+.||..+
T Consensus       234 ~S~~a~~itG~~i~vDGG~~~  254 (255)
T d1gega_         234 ASPDSDYMTGQSLLIDGGMVF  254 (255)
T ss_dssp             HSGGGTTCCSCEEEESSSSSC
T ss_pred             hCchhCCccCcEEEecCCEEe
Confidence            97532  37899999998644

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.63  E-value=1.5e-15  Score=123.93  Aligned_cols=192  Identities=15%  Similarity=0.127  Sum_probs=131.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++++|+.+......        .+...++.++.+|++|++++++++++.     ++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (254)
T d1hdca_          11 TGGARGLGAEAARQAVAAGARVVLADVLDEEGAATA--------RELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence            799999999999999999999999999876543211        222467899999999999888887643     6999


Q ss_pred             EEEcCCCCccc------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~~------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||.....                        ++.++..+.  +..++|++||...+...   |....|..+|...+
T Consensus        83 lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~---~~~~~Y~asKaal~  159 (254)
T d1hdca_          83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL---ALTSSYGASKWGVR  159 (254)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---TTCHHHHHHHHHHH
T ss_pred             EEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccc---cchhhHHHHHHHHH
Confidence            99999874211                        333444444  56799999997654322   22236888998877


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeee-eeHHHHHHHHHHHhcCCc-
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQL-GHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~D~a~~~~~~l~~~~-  200 (314)
                      .+.+       .+++++..|.||.+..+     +.    ........-.. ........+ ...+|+|.+++.++.+.. 
T Consensus       160 ~lt~~lA~e~a~~gIrVN~I~PG~v~T~-----~~----~~~~~~~~~~~-~~~~pl~R~g~~PedvA~~v~fL~S~~a~  229 (254)
T d1hdca_         160 GLSKLAAVELGTDRIRVNSVHPGMTYTP-----MT----AETGIRQGEGN-YPNTPMGRVGNEPGEIAGAVVKLLSDTSS  229 (254)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCH-----HH----HHHTCCCSTTS-CTTSTTSSCB-CHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHhCCCceEEEEeeeCcccCc-----cc----hhcCHHHHHHH-HhCCCCCCCCCCHHHHHHHHHHHhchhhC
Confidence            7653       46899999999987654     21    11111111000 011111122 357999999999997532 


Q ss_pred             -cCCceEEecCCcc
Q 021331          201 -ASRQVFNISGEKY  213 (314)
Q Consensus       201 -~~~~~~~i~~~~~  213 (314)
                       -.|+++.+.||..
T Consensus       230 ~itG~~i~vDGG~t  243 (254)
T d1hdca_         230 YVTGAELAVDGGWT  243 (254)
T ss_dssp             TCCSCEEEESTTTT
T ss_pred             CCCCceEEeCCCcc
Confidence             3789999999864

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.63  E-value=5.6e-16  Score=127.07  Aligned_cols=198  Identities=14%  Similarity=0.123  Sum_probs=123.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc----C--Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K--GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~----~--~~d   74 (314)
                      |||++.||.++++.|+++|++|++++|+.++.....     .++.....++..+.+|++++++++++++.    +  .+|
T Consensus        14 TGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id   88 (259)
T d1xq1a_          14 TGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECL-----SKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD   88 (259)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCcc
Confidence            899999999999999999999999999876543211     12333346789999999999888776653    2  489


Q ss_pred             EEEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      ++||+||....                    +    ++.++..+.  +..++|++||.......   +....|..+|...
T Consensus        89 ilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~---~~~~~Y~asKaal  165 (259)
T d1xq1a_          89 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA---SVGSIYSATKGAL  165 (259)
T ss_dssp             EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------------CCHHHHHHHHH
T ss_pred             cccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccc---cccccccccccch
Confidence            99999987321                    1    233444444  55799999996654222   2223689999887


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      +.+.+       .+|+++..|.||.|-.|.............+.         .......+...+|+|.+++.++.... 
T Consensus       166 ~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~---------~~~pl~R~~~pedvA~~v~fL~S~~s~  236 (259)
T d1xq1a_         166 NQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVI---------SRKPLGRFGEPEEVSSLVAFLCMPAAS  236 (259)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHHHHTSGGGT
T ss_pred             hhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHH---------hCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            77653       46899999999988766321111111111111         11112346678999999999987532 


Q ss_pred             -cCCceEEecCCcccc
Q 021331          201 -ASRQVFNISGEKYVT  215 (314)
Q Consensus       201 -~~~~~~~i~~~~~~s  215 (314)
                       ..|..+.+.||..++
T Consensus       237 ~iTG~~i~vDGG~s~~  252 (259)
T d1xq1a_         237 YITGQTICVDGGLTVN  252 (259)
T ss_dssp             TCCSCEEECCCCEEET
T ss_pred             CCcCcEEEeCCCEECC
Confidence             378899999986543

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.62  E-value=1.4e-15  Score=123.44  Aligned_cols=187  Identities=16%  Similarity=0.212  Sum_probs=131.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++++|++++....        .++...++.++.+|++|++++++++++.     .+|+
T Consensus        12 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi   83 (244)
T d1nffa_          12 SGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAM--------AAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   83 (244)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence            79999999999999999999999999987653211        1122367889999999999888877643     6999


Q ss_pred             EEEcCCCCccc------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~~------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||.....                        ++.++..+.  +..++|++||...+..   .|....|..+|...+
T Consensus        84 linnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~---~~~~~~Y~asKaal~  160 (244)
T d1nffa_          84 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG---TVACHGYTATKFAVR  160 (244)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---CTTBHHHHHHHHHHH
T ss_pred             EEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccc---cccccchhhHHHHHH
Confidence            99999974211                        233333343  4568999999765432   222236898998887


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--  200 (314)
                      .+.+       .+|+++..|.||.+-.|...     .    . .....     ......+...+|+|++++.++....  
T Consensus       161 ~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~-----~----~-~~~~~-----~~pl~R~~~p~diA~~v~fL~s~~s~~  225 (244)
T d1nffa_         161 GLTKSTALELGPSGIRVNSIHPGLVKTPMTD-----W----V-PEDIF-----QTALGRAAEPVEVSNLVVYLASDESSY  225 (244)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-----T----S-CTTCS-----CCSSSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHhcccCEEEEEEeeCCccChhHh-----h----h-hHHHH-----hccccCCCCHHHHHHHHHHHhChhhCC
Confidence            7754       46899999999988765211     0    0 00000     1112246789999999999997532  


Q ss_pred             cCCceEEecCCcc
Q 021331          201 ASRQVFNISGEKY  213 (314)
Q Consensus       201 ~~~~~~~i~~~~~  213 (314)
                      ..|+++.+.||..
T Consensus       226 itG~~i~vDGG~~  238 (244)
T d1nffa_         226 STGAEFVVDGGTV  238 (244)
T ss_dssp             CCSCEEEESTTGG
T ss_pred             CcCCEEEECCCee
Confidence            3788999998864

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.62  E-value=3.4e-16  Score=127.49  Aligned_cols=196  Identities=13%  Similarity=0.064  Sum_probs=129.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++++|+.+...          ..+ ..+..++.+|++|++++++++++.     ++|+
T Consensus        11 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~----------~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   79 (248)
T d2d1ya1          11 TGGARGIGRAIAQAFAREGALVALCDLRPEGKE----------VAE-AIGGAFFQVDLEDERERVRFVEEAAYALGRVDV   79 (248)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH----------HHH-HHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH----------HHH-HcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCe
Confidence            799999999999999999999999999875421          111 135678899999998888777643     6999


Q ss_pred             EEEcCCCCccc------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~~------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||.....                        ++.++..|.  +..++|++||...+...   |....|..+|...+
T Consensus        80 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~---~~~~~Y~asKaal~  156 (248)
T d2d1ya1          80 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE---QENAAYNASKGGLV  156 (248)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC---TTBHHHHHHHHHHH
T ss_pred             EEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccc---cccchhHHHHHHHH
Confidence            99999974211                        233444443  45689999997654322   22236888998877


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcC-CCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      .+.+       .+|+++..|.||.+-.|     ............ .......+......+...+|+|++++.++.+.. 
T Consensus       157 ~ltk~lA~el~~~gIrVN~I~PG~v~T~-----~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~  231 (248)
T d2d1ya1         157 NLTRSLALDLAPLRIRVNAVAPGAIATE-----AVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKAS  231 (248)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCH-----HHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHhhhhCcEEEEEeeCCCCCc-----hHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            7653       46899999999987654     111111000000 000000011112246679999999999997532 


Q ss_pred             -cCCceEEecCCcccc
Q 021331          201 -ASRQVFNISGEKYVT  215 (314)
Q Consensus       201 -~~~~~~~i~~~~~~s  215 (314)
                       ..|+++.+.||...|
T Consensus       232 ~itG~~i~vDGG~tas  247 (248)
T d2d1ya1         232 FITGAILPVDGGMTAS  247 (248)
T ss_dssp             TCCSCEEEESTTGGGB
T ss_pred             CCCCcEEEcCcCcccc
Confidence             378899999987554

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.62  E-value=1.6e-15  Score=123.74  Aligned_cols=198  Identities=17%  Similarity=0.212  Sum_probs=134.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++++|+.++......    +.......++.++.+|++|+++++++++..     ++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~----~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   86 (251)
T d1vl8a_          11 TGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQ----KLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDT   86 (251)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998765332111    011222457888999999999888877643     6999


Q ss_pred             EEEcCCCCccc------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~~------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||.....                        ++.++..+.  +..++|++||.....  ...+....|..+|...+
T Consensus        87 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~--~~~~~~~~Y~asKaal~  164 (251)
T d1vl8a_          87 VVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE--VTMPNISAYAASKGGVA  164 (251)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC--CCSSSCHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcc--ccCccccchHHHHHhHH
Confidence            99999974211                        344555554  456899998854321  11122225888898877


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCCCCch-hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      .+.+       .+|+++..|.||.+-.+...... .......+....++         ..+...+|+|++++.++.... 
T Consensus       165 ~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~fL~S~~a~  235 (251)
T d1vl8a_         165 SLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPL---------GRTGVPEDLKGVAVFLASEEAK  235 (251)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTT---------SSCBCGGGGHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhCchhC
Confidence            7653       46899999999998776321100 01222333333222         135568999999999987533 


Q ss_pred             -cCCceEEecCCcc
Q 021331          201 -ASRQVFNISGEKY  213 (314)
Q Consensus       201 -~~~~~~~i~~~~~  213 (314)
                       ..|+++.+.||..
T Consensus       236 ~itG~~i~vDGG~t  249 (251)
T d1vl8a_         236 YVTGQIIFVDGGWT  249 (251)
T ss_dssp             TCCSCEEEESTTGG
T ss_pred             CCcCcEEEeCcCee
Confidence             3789999998864

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=3.3e-15  Score=121.39  Aligned_cols=191  Identities=12%  Similarity=0.134  Sum_probs=133.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-CccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi~~   79 (314)
                      |||++.||.++++.|+++|++|++++|+.+.....         .+...++..+.+|++|++++++++++. ++|++||+
T Consensus        13 TGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~---------~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn   83 (244)
T d1pr9a_          13 TGAGKGIGRGTVQALHATGARVVAVSRTQADLDSL---------VRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHH---------HHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence            79999999999999999999999999987653311         112356889999999999999999866 58999999


Q ss_pred             CCCCccc------------------------HHHHHHhC-C--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHH
Q 021331           80 NGREADE------------------------VEPILDAL-P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVL  132 (314)
Q Consensus        80 a~~~~~~------------------------~~~~~~~~-~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~  132 (314)
                      ||.....                        ++.++..+ .  +..++|++||......   .|....|..+|...+.+.
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~---~~~~~~Y~asKaal~~lt  160 (244)
T d1pr9a_          84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA---VTNHSVYCSTKGALDMLT  160 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC---CTTBHHHHHHHHHHHHHH
T ss_pred             cccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccc---ccchhhhhhhHHHHHHHH
Confidence            9874211                        23344432 2  4568999999765432   222336888898877765


Q ss_pred             H-------hcCCceEEEecCeeeCCCCCCc-hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cC
Q 021331          133 E-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--AS  202 (314)
Q Consensus       133 ~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~  202 (314)
                      +       .+++++..|.||.|..+..... --......+....+  +       ..+...+|+|++++.++.+..  ..
T Consensus       161 ~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p--l-------~R~~~peevA~~v~fL~S~~a~~it  231 (244)
T d1pr9a_         161 KVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIP--L-------GKFAEVEHVVNAILFLLSDRSGMTT  231 (244)
T ss_dssp             HHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCT--T-------CSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCC--C-------CCCcCHHHHHHHHHHHhCchhCCcC
Confidence            3       3689999999999876521000 01112222322222  1       236779999999999997532  37


Q ss_pred             CceEEecCCc
Q 021331          203 RQVFNISGEK  212 (314)
Q Consensus       203 ~~~~~i~~~~  212 (314)
                      |+++.+.||.
T Consensus       232 G~~i~vDGG~  241 (244)
T d1pr9a_         232 GSTLPVEGGF  241 (244)
T ss_dssp             SCEEEESTTG
T ss_pred             CcEEEECccH
Confidence            8899999885

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.61  E-value=1.7e-15  Score=124.19  Aligned_cols=197  Identities=15%  Similarity=0.135  Sum_probs=134.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc----C--Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K--GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~----~--~~d   74 (314)
                      |||++.||.++++.|+++|++|++.+|+.+......     .++.....++.++.+|++|++++++++++    .  .+|
T Consensus        14 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~id   88 (259)
T d2ae2a_          14 TGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCL-----TQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN   88 (259)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCce
Confidence            799999999999999999999999999876543221     23333456788999999999888877643    2  489


Q ss_pred             EEEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      ++||+||....                    +    ++.++..+.  +..++|++||......   .|....|..+|...
T Consensus        89 ilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~---~~~~~~Y~asKaal  165 (259)
T d2ae2a_          89 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA---VPYEAVYGATKGAM  165 (259)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC---CTTCHHHHHHHHHH
T ss_pred             EEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccc---cccccchHHHHHHH
Confidence            99999997321                    1    233444343  4568999999655322   22223688889887


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCC----CCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLN----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      +.+.+       .+++++..|.||.|-.+..    ..+.....+..+....++         ..+...+|+|++++.++.
T Consensus       166 ~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~g~pedvA~~v~fL~S  236 (259)
T d2ae2a_         166 DQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL---------RRMGEPKELAAMVAFLCF  236 (259)
T ss_dssp             HHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTT---------CSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhC
Confidence            77653       3689999999998865421    111112222333332222         235678999999999997


Q ss_pred             CCc--cCCceEEecCCccc
Q 021331          198 NEK--ASRQVFNISGEKYV  214 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~~~  214 (314)
                      ...  -.|+++.+.||...
T Consensus       237 ~~s~~itG~~i~VDGG~~a  255 (259)
T d2ae2a_         237 PAASYVTGQIIYVDGGLMA  255 (259)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             chhCCCcCcEEEECCCeEe
Confidence            532  37899999988643

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.60  E-value=8.4e-16  Score=125.94  Aligned_cols=199  Identities=16%  Similarity=0.185  Sum_probs=133.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++.+|+.+....        ...+...++.++.+|++|++++++++++.     ++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~--------~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   82 (256)
T d1k2wa_          11 TGSARGIGRAFAEAYVREGARVAIADINLEAARA--------TAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI   82 (256)
T ss_dssp             ETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHH--------HHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            7999999999999999999999999998765332        11223467889999999999988887643     6999


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhC-C--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREAD--------------------E----VEPILDAL-P--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~-~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||....                    +    ++.++..+ +  +..++|++||...+..   .|....|..+|...
T Consensus        83 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~---~~~~~~Y~asKaal  159 (256)
T d1k2wa_          83 LVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRG---EALVGVYCATKAAV  159 (256)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC---CTTCHHHHHHHHHH
T ss_pred             EEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccc---cccccchhhhhhHH
Confidence            9999997321                    1    22233322 2  3468999999765422   22223688889887


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCee------cCCCCCceeeeeeHHHHHHHHHHH
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP------IPGSGIQVTQLGHVKDLARAFVQV  195 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~i~~~D~a~~~~~~  195 (314)
                      +.+.+       .+|+++..|.||.+-.|.     ...+...........      ..........+...+|+|.+++.+
T Consensus       160 ~~lt~~lA~el~~~gIrVN~V~PG~i~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL  234 (256)
T d1k2wa_         160 ISLTQSAGLNLIRHGINVNAIAPGVVDGEH-----WDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFL  234 (256)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCCTT-----HHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcccCeEEEEEecCCCCchh-----hhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            77653       468999999999887762     222211111000000      000000112366789999999998


Q ss_pred             hcCCc--cCCceEEecCCcccc
Q 021331          196 LGNEK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       196 l~~~~--~~~~~~~i~~~~~~s  215 (314)
                      +....  -.|+++.+.||..+|
T Consensus       235 ~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         235 ATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             TSGGGTTCCSCEEEESTTSSCC
T ss_pred             hCchhCCccCceEEECcchhhC
Confidence            87532  378999999997664

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.3e-15  Score=121.66  Aligned_cols=193  Identities=18%  Similarity=0.190  Sum_probs=132.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++++|+.+...         .+.+...++.++.+|++|+++++++++..     ++|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~---------~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (250)
T d1ydea1          12 TGGGRGIGAGIVRAFVNSGARVVICDKDESGGR---------ALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   82 (250)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------HHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------HHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999876532         12222357889999999999888887643     6999


Q ss_pred             EEEcCCCCcc---------------------c----HHHHHHhCC-CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD---------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||....                     +    ++.++..++ +..++|++||.......   |....|..+|...+
T Consensus        83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~---~~~~~Y~asKaal~  159 (250)
T d1ydea1          83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ---AQAVPYVATKGAVT  159 (250)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC---TTCHHHHHHHHHHH
T ss_pred             EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccc---cCcchhHHHHhhHH
Confidence            9999985311                     1    233444444 34689999997654322   22226888898877


Q ss_pred             HHHH-------hcCCceEEEecCeeeCCCC-----CCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          130 SVLE-------SKGVNWTSLRPVYIYGPLN-----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       130 ~~~~-------~~~~~~~ilR~~~v~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      .+.+       .+++++..|.||.|-.|..     ..+-....+.......++         ..+...+|+|.+++.++.
T Consensus       160 ~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~g~p~eva~~v~fL~S  230 (250)
T d1ydea1         160 AMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL---------GRMGQPAEVGAAAVFLAS  230 (250)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT---------SSCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhC
Confidence            7653       4689999999998865410     000111122222222221         236679999999999886


Q ss_pred             CCc-cCCceEEecCCccc
Q 021331          198 NEK-ASRQVFNISGEKYV  214 (314)
Q Consensus       198 ~~~-~~~~~~~i~~~~~~  214 (314)
                      ... ..|+++.+.||..+
T Consensus       231 da~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         231 EANFCTGIELLVTGGAEL  248 (250)
T ss_dssp             HCTTCCSCEEEESTTTTS
T ss_pred             ccCCCcCCeEEECCCccc
Confidence            422 37889999998654

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.60  E-value=1.9e-15  Score=122.55  Aligned_cols=192  Identities=15%  Similarity=0.182  Sum_probs=132.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-CccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi~~   79 (314)
                      |||++.||.++++.|+++|++|++++|+.+....         +.+...++..+.+|++|++++++++++. ++|++||+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~---------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnn   81 (242)
T d1cyda_          11 TGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVS---------LAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   81 (242)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------HHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEEC
Confidence            7999999999999999999999999998765321         1122357889999999999999999876 58999999


Q ss_pred             CCCCccc------------------------HHHHHHhCC---CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHH
Q 021331           80 NGREADE------------------------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVL  132 (314)
Q Consensus        80 a~~~~~~------------------------~~~~~~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~  132 (314)
                      ||.....                        ++.++..+.   ...++|++||...+..   .|....|..+|...+.+.
T Consensus        82 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~---~~~~~~Y~asKaal~~lt  158 (242)
T d1cyda_          82 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT---FPNLITYSSTKGAMTMLT  158 (242)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC---CTTBHHHHHHHHHHHHHH
T ss_pred             CccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcccc---CCccccccchHHHHHHHH
Confidence            9974211                        222333222   3458999999765432   222236899998887776


Q ss_pred             H-------hcCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cC
Q 021331          133 E-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--AS  202 (314)
Q Consensus       133 ~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~  202 (314)
                      +       .+|+++..|.||.+-.+.... ..-......+....++         ..+...+|+|++++.++.+..  ..
T Consensus       159 ~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl---------~R~~~peeva~~v~fL~S~~s~~it  229 (242)
T d1cyda_         159 KAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPL---------RKFAEVEDVVNSILFLLSDRSASTS  229 (242)
T ss_dssp             HHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTT---------SSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCchhcCcC
Confidence            4       468999999999876541100 0001122222222221         236678999999999997532  37


Q ss_pred             CceEEecCCcc
Q 021331          203 RQVFNISGEKY  213 (314)
Q Consensus       203 ~~~~~i~~~~~  213 (314)
                      |+++.+.||..
T Consensus       230 G~~i~vDGG~~  240 (242)
T d1cyda_         230 GGGILVDAGYL  240 (242)
T ss_dssp             SSEEEESTTGG
T ss_pred             CceEEeCcchh
Confidence            88999998853

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.59  E-value=2e-15  Score=123.92  Aligned_cols=194  Identities=13%  Similarity=0.220  Sum_probs=131.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++++|+.+......     ..+.+...++..+.+|++|+++++++++..     ++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   85 (260)
T d1zema1          11 TGAGGNIGLATALRLAEEGTAIALLDMNREALEKAE-----ASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDF   85 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCe
Confidence            799999999999999999999999999876532211     133333467899999999998888877643     6999


Q ss_pred             EEEcCCCCcc-c------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREAD-E------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~-~------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||.... .                        ++.++..+.  +..++|++||...+...   |....|..+|...
T Consensus        86 lVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~---~~~~~Y~asKaal  162 (260)
T d1zema1          86 LFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP---PNMAAYGTSKGAI  162 (260)
T ss_dssp             EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC---TTBHHHHHHHHHH
T ss_pred             ehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCC---cchHHHHHHHHHH
Confidence            9999986311 1                        233444443  55699999997654322   2223688899887


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCC---------------CCchhHHHHHHHHcCCCeecCCCCCceeeeeeHH
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLN---------------YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  186 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  186 (314)
                      +.+.+       .+|+++..|.||.|-.+..               .........+.+...-++         ..+...+
T Consensus       163 ~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl---------~R~g~pe  233 (260)
T d1zema1         163 IALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM---------RRYGDIN  233 (260)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT---------SSCBCGG
T ss_pred             HHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCC---------CCCcCHH
Confidence            77653       4689999999999876510               000011122222222211         2356789


Q ss_pred             HHHHHHHHHhcCCc--cCCceEEecCC
Q 021331          187 DLARAFVQVLGNEK--ASRQVFNISGE  211 (314)
Q Consensus       187 D~a~~~~~~l~~~~--~~~~~~~i~~~  211 (314)
                      |+|.+++.++....  -.|.++.+.||
T Consensus       234 dvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         234 EIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             GSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHHHHHhCchhcCccCCeEEeCCC
Confidence            99999999997532  36888888775

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.59  E-value=9.8e-16  Score=125.90  Aligned_cols=204  Identities=14%  Similarity=0.157  Sum_probs=129.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhh-hhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||++.||.++++.|+++|++|++++|+.......+.    ..+ .....++.++.+|++|+++++++++..     ++|
T Consensus        10 TGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~----~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   85 (260)
T d1x1ta1          10 TGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVR----AGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRID   85 (260)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHH----HHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCc
Confidence            8999999999999999999999999998643211111    111 112357889999999999988887643     699


Q ss_pred             EEEEcCCCCccc------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~~~------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      ++||+||.....                        ++.++..+.  +..++|++||......   .|....|..+|...
T Consensus        86 iLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~---~~~~~~Y~asKaal  162 (260)
T d1x1ta1          86 ILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA---SANKSAYVAAKHGV  162 (260)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---CTTCHHHHHHHHHH
T ss_pred             EEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceec---cCCcchhhhhhhhH
Confidence            999999974211                        233444444  5569999999765432   22223689999887


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCC--e-ecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP--I-PIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      +.+.+       .+|+++..|.||.|-.+.... .+............  . ...........+...+|+|++++.++..
T Consensus       163 ~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~  241 (260)
T d1x1ta1         163 VGFTKVTALETAGQGITANAICPGWVRTPLVEK-QISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASD  241 (260)
T ss_dssp             HHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSG
T ss_pred             HHhHHHHHHHhchhCcEEEEEecCCCCChhhhh-hhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCh
Confidence            77653       468999999999887653111 11100000000000  0 0000001122467899999999999975


Q ss_pred             Cc--cCCceEEecCCc
Q 021331          199 EK--ASRQVFNISGEK  212 (314)
Q Consensus       199 ~~--~~~~~~~i~~~~  212 (314)
                      ..  ..|+++.+.||.
T Consensus       242 ~a~~itG~~i~vDGG~  257 (260)
T d1x1ta1         242 AAAQITGTTVSVDGGW  257 (260)
T ss_dssp             GGTTCCSCEEEESTTG
T ss_pred             hhCCCcCCEEEECcch
Confidence            32  378899999885

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.59  E-value=2.3e-15  Score=123.42  Aligned_cols=195  Identities=21%  Similarity=0.272  Sum_probs=131.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++.+|+.+......     +++.+...++.++.+|++|+++++++++..     ++|+
T Consensus         8 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~-----~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (257)
T d2rhca1           8 TGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTL-----KELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDV   82 (257)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999876533211     233444567899999999999888877642     6999


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC----CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      +||+||....                    +    ++.++..+.    +..++|++||...+...   |....|..+|..
T Consensus        83 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~---~~~~~Y~asKaa  159 (257)
T d2rhca1          83 LVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV---VHAAPYSASKHG  159 (257)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCC---TTCHHHHHHHHH
T ss_pred             EEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccc---ccchhHHHHHHH
Confidence            9999997321                    1    223333222    44578999886554322   222368999988


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCC----------CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHH
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNY----------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  190 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  190 (314)
                      ...+.+       .+|+++..|.||.|-.|...          ..........+....+         ...+...+|+|+
T Consensus       160 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~P---------lgR~~~pedia~  230 (257)
T d2rhca1         160 VVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVP---------IGRYVQPSEVAE  230 (257)
T ss_dssp             HHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTST---------TSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCC---------CCCCcCHHHHHH
Confidence            777764       35789999999987654100          0001112222222211         123677999999


Q ss_pred             HHHHHhcCCc--cCCceEEecCCc
Q 021331          191 AFVQVLGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       191 ~~~~~l~~~~--~~~~~~~i~~~~  212 (314)
                      +++.+++...  ..|+++.+.||-
T Consensus       231 ~v~fL~S~~s~~itG~~i~vDGG~  254 (257)
T d2rhca1         231 MVAYLIGPGAAAVTAQALNVCGGL  254 (257)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHhCchhcCCcCceEEECcCc
Confidence            9999997532  378899998873

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.59  E-value=1.2e-15  Score=124.54  Aligned_cols=193  Identities=19%  Similarity=0.205  Sum_probs=128.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++++|+.+.......     .+. ...++.++.+|++|+++++++++..     ++|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   85 (251)
T d1zk4a1          12 TGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAK-----SVG-TPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST   85 (251)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHC-CTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HhC-CCCcEEEEEccCCCHHHHHHHHHHHHHHhCCceE
Confidence            8999999999999999999999999998765321110     111 1357899999999999888877643     6999


Q ss_pred             EEEcCCCCccc------------------------HHHHHHhCC--C-CCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~~------------------------~~~~~~~~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||.....                        ++.++..|.  + ..++|++||...+-.   .|....|..+|...
T Consensus        86 LVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~---~~~~~~Y~asKaal  162 (251)
T d1zk4a1          86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG---DPSLGAYNASKGAV  162 (251)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC---CTTCHHHHHHHHHH
T ss_pred             EEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceecc---CCCchhHHHHHHHH
Confidence            99999874221                        334444444  3 247899999665322   22223688888766


Q ss_pred             HHHH---------HhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcC-CCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          129 ESVL---------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       129 e~~~---------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      +.+.         ..+|+++..|.||.+-.+.........   ..... ...+       ...+...+|+|.+++.++..
T Consensus       163 ~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~p-------l~R~~~pedvA~~v~fL~S~  232 (251)
T d1zk4a1         163 RIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAE---EAMSQRTKTP-------MGHIGEPNDIAYICVYLASN  232 (251)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHH---HHHTSTTTCT-------TSSCBCHHHHHHHHHHHHSG
T ss_pred             hcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHH---HHHHHHhCCC-------CCCCcCHHHHHHHHHHHhCc
Confidence            5443         246799999999988665211100011   11111 1111       12467899999999999975


Q ss_pred             Cc--cCCceEEecCCc
Q 021331          199 EK--ASRQVFNISGEK  212 (314)
Q Consensus       199 ~~--~~~~~~~i~~~~  212 (314)
                      ..  -.|+++.+.||.
T Consensus       233 ~s~~itG~~i~vDGG~  248 (251)
T d1zk4a1         233 ESKFATGSEFVVDGGY  248 (251)
T ss_dssp             GGTTCCSCEEEESTTG
T ss_pred             hhCCCcCcEEEECccc
Confidence            32  378899999885

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.58  E-value=4.7e-15  Score=120.22  Aligned_cols=191  Identities=18%  Similarity=0.252  Sum_probs=132.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++++|+.+....        ...+...++.++++|+++++++++++++.     ++|+
T Consensus        11 tGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi   82 (241)
T d2a4ka1          11 TGAASGIGRAALDLFAREGASLVAVDREERLLAE--------AVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   82 (241)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            7999999999999999999999999998766432        22223467889999999999998877643     6999


Q ss_pred             EEEcCCCCccc------------------------HHHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           76 VYDINGREADE------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        76 vi~~a~~~~~~------------------------~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      +||+|+.....                        ++.++..+.+.+.++.+|+.+....    |-...|+.+|...+.+
T Consensus        83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~----~~~~~Y~~sK~al~~l  158 (241)
T d2a4ka1          83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA----FGLAHYAAGKLGVVGL  158 (241)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH----HHHHHHHHCSSHHHHH
T ss_pred             eccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccc----cCccccchhhHHHHHH
Confidence            99998863211                        2333333444445555555433221    2223688889888887


Q ss_pred             HH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cC
Q 021331          132 LE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--AS  202 (314)
Q Consensus       132 ~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~  202 (314)
                      .+       .+|+++..+.||.+-.+... .+............++         ..+...+|+|++++.++.+..  -.
T Consensus       159 t~~lA~el~~~gIrvN~I~PG~v~T~~~~-~~~~~~~~~~~~~~p~---------~r~~~p~dva~~v~fL~S~~s~~it  228 (241)
T d2a4ka1         159 ARTLALELARKGVRVNVLLPGLIQTPMTA-GLPPWAWEQEVGASPL---------GRAGRPEEVAQAALFLLSEESAYIT  228 (241)
T ss_dssp             HHHHHHHHTTTTCEEEEEEECSBCCGGGT-TSCHHHHHHHHHTSTT---------CSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHhHhCCEEeeeccCcCCCHHHH-hhhHhHHHHHHhCCCC---------CCCcCHHHHHHHHHHHhcchhCCCc
Confidence            64       35799999999988655321 2233344444443322         236678999999999997532  37


Q ss_pred             CceEEecCCcc
Q 021331          203 RQVFNISGEKY  213 (314)
Q Consensus       203 ~~~~~i~~~~~  213 (314)
                      |.++.+.||..
T Consensus       229 G~~i~vDGG~s  239 (241)
T d2a4ka1         229 GQALYVDGGRS  239 (241)
T ss_dssp             SCEEEESTTTT
T ss_pred             CceEEeCCCcc
Confidence            88999999864

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.58  E-value=3.6e-15  Score=122.15  Aligned_cols=197  Identities=14%  Similarity=0.132  Sum_probs=133.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhh----cC--Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----AK--GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~----~~--~~d   74 (314)
                      |||++.||.++++.|+++|++|++++|+.+......     +.+.+....+.++.+|++++++++++++    +.  .+|
T Consensus        12 TGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~-----~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~id   86 (258)
T d1ae1a_          12 TGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECL-----EIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN   86 (258)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcE
Confidence            799999999999999999999999999875533211     2334445678889999999998877664    23  489


Q ss_pred             EEEEcCCCCccc------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~~~------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      ++||++|.....                        ++.++..+.  +..++|++||......   .|....|..+|...
T Consensus        87 ilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~---~~~~~~Y~~sK~al  163 (258)
T d1ae1a_          87 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA---LPSVSLYSASKGAI  163 (258)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC---CTTCHHHHHHHHHH
T ss_pred             EEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccc---cccchhHHHHHHHH
Confidence            999999874211                        222333333  6679999999776432   23333688888887


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCc-----hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNP-----VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      +.+.+       .+++++..|.||.+..+.....     ........+....++         ..+...+|+|.+++.++
T Consensus       164 ~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------gR~~~pediA~~v~fL~  234 (258)
T d1ae1a_         164 NQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM---------GRAGKPQEVSALIAFLC  234 (258)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT---------CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHh
Confidence            77764       3679999999999987632111     112233333322221         23678999999999999


Q ss_pred             cCCc--cCCceEEecCCccc
Q 021331          197 GNEK--ASRQVFNISGEKYV  214 (314)
Q Consensus       197 ~~~~--~~~~~~~i~~~~~~  214 (314)
                      .+..  ..|..+.+.||...
T Consensus       235 S~~s~~itG~~i~vDGG~s~  254 (258)
T d1ae1a_         235 FPAASYITGQIIWADGGFTA  254 (258)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             ChhhCCCcCcEEEeCCCeec
Confidence            7532  37889999988643

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.58  E-value=1e-15  Score=125.49  Aligned_cols=192  Identities=17%  Similarity=0.229  Sum_probs=131.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh--ccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||++.||.++++.|+++|++|++++|+.+.......     .+..  ...++..+.+|++|+++++++++..     ++
T Consensus        10 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~-----~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   84 (258)
T d1iy8a_          10 TGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKA-----AVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRI   84 (258)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999998765321110     1111  1246888999999999888877543     69


Q ss_pred             cEEEEcCCCCcc---------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchh
Q 021331           74 DVVYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKL  126 (314)
Q Consensus        74 d~vi~~a~~~~~---------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~  126 (314)
                      |++||+||....                     +    ++.++..+.  +..++|++||...+-.   .|....|..+|.
T Consensus        85 DiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~---~~~~~~Y~asKa  161 (258)
T d1iy8a_          85 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG---IGNQSGYAAAKH  161 (258)
T ss_dssp             SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB---CSSBHHHHHHHH
T ss_pred             CEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccC---CCCchHHHHHHH
Confidence            999999986311                     1    233334444  5678999999665422   222336888898


Q ss_pred             hHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHH------------HHHHHcCCCeecCCCCCceeeeeeHHH
Q 021331          127 NTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWF------------FHRLKAGRPIPIPGSGIQVTQLGHVKD  187 (314)
Q Consensus       127 ~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~i~~~D  187 (314)
                      ..+.+.+       .+|+++..|.||.+..|     +....            ...+....+         ...+...+|
T Consensus       162 al~~lt~~lA~el~~~gIrVN~i~PG~v~T~-----~~~~~~~~~~~~~~~~~~~~~~~~~p---------l~R~~~p~d  227 (258)
T d1iy8a_         162 GVVGLTRNSAVEYGRYGIRINAIAPGAIWTP-----MVENSMKQLDPENPRKAAEEFIQVNP---------SKRYGEAPE  227 (258)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCSH-----HHHHHHHHHCTTCHHHHHHHHHTTCT---------TCSCBCHHH
T ss_pred             HHHHHHHHHHHHhCccCceEEEEeeCcccCH-----HHHHHHhhcCcccHHHHHHHHHhcCC---------CCCCcCHHH
Confidence            7776653       46899999999988765     22222            122222211         123667899


Q ss_pred             HHHHHHHHhcCC--ccCCceEEecCCccc
Q 021331          188 LARAFVQVLGNE--KASRQVFNISGEKYV  214 (314)
Q Consensus       188 ~a~~~~~~l~~~--~~~~~~~~i~~~~~~  214 (314)
                      +|++++.++...  ...|+++.+.||...
T Consensus       228 vA~~v~fL~S~~s~~itG~~i~VDGG~sa  256 (258)
T d1iy8a_         228 IAAVVAFLLSDDASYVNATVVPIDGGQSA  256 (258)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHHhCchhcCCcCceEEcCcchhc
Confidence            999999999753  237889999998754

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2.5e-16  Score=128.98  Aligned_cols=205  Identities=16%  Similarity=0.175  Sum_probs=132.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||++.||.++++.|+++|++|++++|+.++......     .+.+.  ..++.++.+|++|+++++++++..     ++
T Consensus         9 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (254)
T d2gdza1           9 TGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKA-----ALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRL   83 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            7999999999999999999999999998765321110     11110  257889999999999888877542     69


Q ss_pred             cEEEEcCCCCccc----------------HHHHHHhCC-----CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHH
Q 021331           74 DVVYDINGREADE----------------VEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVL  132 (314)
Q Consensus        74 d~vi~~a~~~~~~----------------~~~~~~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~  132 (314)
                      |++||+||.....                ++.++..+.     ...++|++||...+-.   .|....|..+|...+.+.
T Consensus        84 DilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~---~~~~~~Y~asKaal~~lt  160 (254)
T d2gdza1          84 DILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP---VAQQPVYCASKHGIVGFT  160 (254)
T ss_dssp             CEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC---CTTCHHHHHHHHHHHHHH
T ss_pred             CeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccC---CCCccchHHHHHHHHHHH
Confidence            9999999984321                233444443     1256999999765422   222236888887665543


Q ss_pred             ---------HhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeec---CCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          133 ---------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI---PGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       133 ---------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                               ..+|+++..|.||.|-.+     ++..+............   .........+...+|+|++++.+++++.
T Consensus       161 rs~ala~e~~~~gIrVN~I~PG~i~T~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~  235 (254)
T d2gdza1         161 RSAALAANLMNSGVRLNAICPGFVNTA-----ILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDA  235 (254)
T ss_dssp             HHHHHHHHHHTCCEEEEEEEESCBSSH-----HHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHhcCCCEEEEEEEcCCCCCh-----hhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHcCCC
Confidence                     246799999999987554     11111000000000000   0000001235668999999999998766


Q ss_pred             cCCceEEecCCccccHHH
Q 021331          201 ASRQVFNISGEKYVTFDG  218 (314)
Q Consensus       201 ~~~~~~~i~~~~~~s~~e  218 (314)
                      -.|.++.|.||..+.+.|
T Consensus       236 itG~~i~VdGG~~~~~~~  253 (254)
T d2gdza1         236 LNGAIMKITTSKGIHFQD  253 (254)
T ss_dssp             CSSCEEEEETTTEEEECC
T ss_pred             CCCCEEEECCCCeeeccc
Confidence            689999999998766543

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.57  E-value=6.1e-15  Score=121.65  Aligned_cols=200  Identities=16%  Similarity=0.151  Sum_probs=133.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++++|+.+.......     ++. ....+.++.+|++|+++++++++..     ++|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~-----~l~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   85 (268)
T d2bgka1          12 TGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCN-----NIG-SPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI   85 (268)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHC-CTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----Hhc-CCCceEEEEccCCCHHHHHHHHHHHHHHcCCcce
Confidence            7999999999999999999999999998765321111     111 1246788999999999888887542     6999


Q ss_pred             EEEcCCCCcc--------------------------cHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           76 VYDINGREAD--------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        76 vi~~a~~~~~--------------------------~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      +||+||....                          .++.++..+.  +..++|++||...+...  .+....|..+|..
T Consensus        86 lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~--~~~~~~Y~asKaa  163 (268)
T d2bgka1          86 MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG--EGVSHVYTATKHA  163 (268)
T ss_dssp             EEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC--TTSCHHHHHHHHH
T ss_pred             eccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccc--cccccccchhHHH
Confidence            9999985211                          0334444444  55689999886554221  1222258888888


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCc--hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      .+.+.+       .+|+++..|.||.+-.|.....  ...............+       ...+...+|+|++++.++..
T Consensus       164 l~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~-------~gr~~~pedvA~~v~fL~S~  236 (268)
T d2bgka1         164 VLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANL-------KGTLLRAEDVADAVAYLAGD  236 (268)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSS-------CSCCCCHHHHHHHHHHHHSG
T ss_pred             HHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhcccc-------CCCCcCHHHHHHHHHHHhCh
Confidence            777653       4689999999999987743211  1111112221111111       11356789999999999975


Q ss_pred             Cc--cCCceEEecCCcccc
Q 021331          199 EK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       199 ~~--~~~~~~~i~~~~~~s  215 (314)
                      ..  -.|+++.+.||.+.+
T Consensus       237 ~s~~itGq~i~VDGG~t~~  255 (268)
T d2bgka1         237 ESKYVSGLNLVIDGGYTRT  255 (268)
T ss_dssp             GGTTCCSCEEEESTTGGGC
T ss_pred             hhCCccCceEEECcCcccC
Confidence            32  378999999997544

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.56  E-value=3.7e-15  Score=121.73  Aligned_cols=191  Identities=16%  Similarity=0.173  Sum_probs=129.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++.+|+.+.....        ..+...+..++.+|++|+++++++++..     ++|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_          12 TGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQL--------AAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH--------HHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            89999999999999999999999999987653211        1122367888999999998888877643     6899


Q ss_pred             EEEcCCCCccc------------------------HHHHHHhCC-CCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           76 VYDINGREADE------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        76 vi~~a~~~~~~------------------------~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      +||+||.....                        ++.++..++ +..++|++||...+..   .|....|..+|...+.
T Consensus        84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~---~~~~~~Y~asKaal~~  160 (253)
T d1hxha_          84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLP---IEQYAGYSASKAAVSA  160 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSC---CTTBHHHHHHHHHHHH
T ss_pred             EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcC---ccccccccchhHHHHH
Confidence            99999974211                        344555555 4578999999665322   2222368888877766


Q ss_pred             HHH-------h--cCCceEEEecCeeeCCCCCCchhHHHH-----HHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          131 VLE-------S--KGVNWTSLRPVYIYGPLNYNPVEEWFF-----HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       131 ~~~-------~--~~~~~~ilR~~~v~g~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      +.+       .  +++++..|.||.+..+     +....+     +.......     .....-.+...+|+|++++.++
T Consensus       161 lt~~lA~e~~~~g~~IrVN~I~PG~i~T~-----~~~~~~~~~~~~~~~~~~~-----~~~~~gr~~~pedvA~~v~fL~  230 (253)
T d1hxha_         161 LTRAAALSCRKQGYAIRVNSIHPDGIYTP-----MMQASLPKGVSKEMVLHDP-----KLNRAGRAYMPERIAQLVLFLA  230 (253)
T ss_dssp             HHHHHHHHHHHHTCCEEEEEEEESEECCH-----HHHHHSCTTCCHHHHBCBT-----TTBTTCCEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhcCCCEEEEEEeECCCcCH-----hHHhhCcchhhHHHHHhCc-----cccccCCCCCHHHHHHHHHHHh
Confidence            643       1  3589999999998765     111110     11111110     1111224778999999999999


Q ss_pred             cCCc--cCCceEEecCCc
Q 021331          197 GNEK--ASRQVFNISGEK  212 (314)
Q Consensus       197 ~~~~--~~~~~~~i~~~~  212 (314)
                      ....  -.|+++++.||.
T Consensus       231 S~~s~~itG~~i~VDGG~  248 (253)
T d1hxha_         231 SDESSVMSGSELHADNSI  248 (253)
T ss_dssp             SGGGTTCCSCEEEESSSC
T ss_pred             ChhhCCCcCcEEEECccH
Confidence            7532  378899998874

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.8e-15  Score=126.41  Aligned_cols=200  Identities=12%  Similarity=0.197  Sum_probs=129.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhh-hhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||++.||.++++.|+++|++|++++|+.++....... ....+ .....++..+.+|++|+++++++++..     ++|
T Consensus        18 TGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~e-l~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD   96 (297)
T d1yxma1          18 TGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADE-LQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKIN   96 (297)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-HHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHhCCeE
Confidence            79999999999999999999999999987553211100 00000 011357889999999999888877642     699


Q ss_pred             EEEEcCCCCccc------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~~~------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      ++||+|+.....                        ++.++..+.  +..++|++|+....+    .|....|..+|...
T Consensus        97 iLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~----~~~~~~Y~asKaal  172 (297)
T d1yxma1          97 FLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG----FPLAVHSGAARAGV  172 (297)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC----CTTCHHHHHHHHHH
T ss_pred             EEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccccc----ccccccchhHHHHH
Confidence            999999874211                        233444444  455678777643322    23333688889887


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCc---hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNP---VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      +.+.+       .+|+++..|.||.|..+.....   ............    ++     ...+...+|+|.+++.++..
T Consensus       173 ~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~----~p-----lgR~g~pedvA~~v~fL~Sd  243 (297)
T d1yxma1         173 YNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK----IP-----AKRIGVPEEVSSVVCFLLSP  243 (297)
T ss_dssp             HHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG----ST-----TSSCBCTHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhc----CC-----CCCCcCHHHHHHHHHHHhCc
Confidence            77654       3689999999999877631110   001111111111    11     12366789999999999975


Q ss_pred             Cc--cCCceEEecCCccc
Q 021331          199 EK--ASRQVFNISGEKYV  214 (314)
Q Consensus       199 ~~--~~~~~~~i~~~~~~  214 (314)
                      ..  ..|+++.|.||..+
T Consensus       244 ~s~~iTG~~i~VDGG~sl  261 (297)
T d1yxma1         244 AASFITGQSVDVDGGRSL  261 (297)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             hhcCcCCcEEEeCcChhh
Confidence            32  37899999998643

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.54  E-value=4e-14  Score=116.11  Aligned_cols=196  Identities=20%  Similarity=0.221  Sum_probs=129.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++.+++........    .+.+.+...++.++.+|++|+++++++++..     .+|+
T Consensus        12 TGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~----~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idi   87 (259)
T d1ja9a_          12 TGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEV----VAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDF   87 (259)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHH----HHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            899999999999999999999998877654422111    1233444568899999999998888777532     6999


Q ss_pred             EEEcCCCCccc------------------------HHHHHHhCCCCCcEEEEeec-eeeccCCCCCccCccccchhhHHH
Q 021331           76 VYDINGREADE------------------------VEPILDALPNLEQFIYCSSA-GVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        76 vi~~a~~~~~~------------------------~~~~~~~~~~~~~~i~~Ss~-~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      +||+||.....                        ++.++..+++..+++.++|. +...   ..|-...|..+|...+.
T Consensus        88 linnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~---~~~~~~~Y~asK~al~~  164 (259)
T d1ja9a_          88 VMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT---GIPNHALYAGSKAAVEG  164 (259)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC---SCCSCHHHHHHHHHHHH
T ss_pred             EEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccccccc---CCCCchhHHHHHHHHHH
Confidence            99999974211                        33444445533456666553 3332   22223368888987777


Q ss_pred             HHH-------hcCCceEEEecCeeeCCC-----------CC-CchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHH
Q 021331          131 VLE-------SKGVNWTSLRPVYIYGPL-----------NY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  191 (314)
Q Consensus       131 ~~~-------~~~~~~~ilR~~~v~g~~-----------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  191 (314)
                      +.+       .+|+++..|.||.+-.+.           .. ......+...+....++         ..+...+|+|++
T Consensus       165 l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~g~p~eVa~~  235 (259)
T d1ja9a_         165 FCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL---------KRIGYPADIGRA  235 (259)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTT---------SSCBCHHHHHHH
T ss_pred             HHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCC---------CCCcCHHHHHHH
Confidence            653       468999999999885431           00 11112222333333322         236679999999


Q ss_pred             HHHHhcCCc--cCCceEEecCCc
Q 021331          192 FVQVLGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       192 ~~~~l~~~~--~~~~~~~i~~~~  212 (314)
                      ++.++++..  -.|.++.+.||.
T Consensus       236 v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         236 VSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHhCchhcCCcCceEEeCCCC
Confidence            999998643  378899998875

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.54  E-value=1.8e-14  Score=116.29  Aligned_cols=184  Identities=15%  Similarity=0.192  Sum_probs=123.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh-hhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~l~~~~~~~~~d~vi~~   79 (314)
                      |||++.||.++++.|+++|++|++++|+.+...              ..+.+++.+|+++. +.+.+.+.  ++|++||+
T Consensus        10 TGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~--------------~~~~~~~~~Dv~~~~~~~~~~~g--~iD~lVnn   73 (234)
T d1o5ia_          10 LAASRGIGRAVADVLSQEGAEVTICARNEELLK--------------RSGHRYVVCDLRKDLDLLFEKVK--EVDILVLN   73 (234)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--------------HTCSEEEECCTTTCHHHHHHHSC--CCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH--------------hcCCcEEEcchHHHHHHHHHHhC--CCcEEEec
Confidence            799999999999999999999999999865532              13456788999763 33444444  79999999


Q ss_pred             CCCCccc------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHH
Q 021331           80 NGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLE  133 (314)
Q Consensus        80 a~~~~~~------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~  133 (314)
                      ||.....                        ++.++..+.  +..++|++||.......   +....|..+|...+.+.+
T Consensus        74 AG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~---~~~~~Y~asKaal~~ltk  150 (234)
T d1o5ia_          74 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI---ENLYTSNSARMALTGFLK  150 (234)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---TTBHHHHHHHHHHHHHHH
T ss_pred             ccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccc---cccccchhHHHHHHHHHH
Confidence            9863211                        233444444  55689999986654322   222257788887776653


Q ss_pred             -------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cCCc
Q 021331          134 -------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQ  204 (314)
Q Consensus       134 -------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~~~  204 (314)
                             .+|+++..|.||.+-.+.............+....++         ..+...+|+|.+++.++....  -.|+
T Consensus       151 ~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl---------~R~~~pediA~~v~fL~S~~s~~itG~  221 (234)
T d1o5ia_         151 TLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPM---------RRMAKPEEIASVVAFLCSEKASYLTGQ  221 (234)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTT---------SSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhChhhcCCcCc
Confidence                   4689999999998876632111111122222222221         236679999999999997532  3789


Q ss_pred             eEEecCCc
Q 021331          205 VFNISGEK  212 (314)
Q Consensus       205 ~~~i~~~~  212 (314)
                      ++.+.||.
T Consensus       222 ~i~vDGG~  229 (234)
T d1o5ia_         222 TIVVDGGL  229 (234)
T ss_dssp             EEEESTTC
T ss_pred             EEEECccc
Confidence            99999885

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=4.1e-14  Score=114.87  Aligned_cols=192  Identities=13%  Similarity=0.090  Sum_probs=130.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-CccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-~~d~vi~~   79 (314)
                      |||++.||.++++.|+++|++|++++|++++......          ..+++...+|+.+.+.++...... ++|++||+
T Consensus        12 TGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~   81 (245)
T d2ag5a1          12 TAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK----------YPGIQTRVLDVTKKKQIDQFANEVERLDVLFNV   81 (245)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG----------STTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----------ccCCceeeeeccccccccccccccccceeEEec
Confidence            7999999999999999999999999998765432222          257888899998887777766543 69999999


Q ss_pred             CCCCccc------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHH
Q 021331           80 NGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLE  133 (314)
Q Consensus        80 a~~~~~~------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~  133 (314)
                      +|.....                        ++.++..+.  +..++|++||...  .....+....|+.+|...+.+.+
T Consensus        82 ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~--~~~~~~~~~~Y~~sKaal~~l~r  159 (245)
T d2ag5a1          82 AGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVAS--SVKGVVNRCVYSTTKAAVIGLTK  159 (245)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT--TTBCCTTBHHHHHHHHHHHHHHH
T ss_pred             ccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhh--ccCCccchhHHHHHHHHHHHHHH
Confidence            9874221                        233333333  5568999988532  11112222268899988887764


Q ss_pred             -------hcCCceEEEecCeeeCCCCCC-----chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          134 -------SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       134 -------~~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                             .+|+++..|.||.+-.|....     .........+....+         ...+...+|+|+++..++.+.. 
T Consensus       160 ~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p---------l~R~~~pedva~~v~fL~s~~s~  230 (245)
T d2ag5a1         160 SVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK---------TGRFATAEEIAMLCVYLASDESA  230 (245)
T ss_dssp             HHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT---------TSSCEEHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhChhhC
Confidence                   468999999999987752100     001112222222222         1246788999999999997533 


Q ss_pred             -cCCceEEecCCcc
Q 021331          201 -ASRQVFNISGEKY  213 (314)
Q Consensus       201 -~~~~~~~i~~~~~  213 (314)
                       -.|.++.|.||.+
T Consensus       231 ~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         231 YVTGNPVIIDGGWS  244 (245)
T ss_dssp             TCCSCEEEECTTGG
T ss_pred             CCcCceEEeCCCcC
Confidence             3789999999864

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.53  E-value=1e-14  Score=119.66  Aligned_cols=199  Identities=15%  Similarity=0.197  Sum_probs=131.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++++|+.+.......    +...+...++.++.+|++|++++++++++.     ++|+
T Consensus        15 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   90 (260)
T d1h5qa_          15 TGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTE----KVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISG   90 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHH----HHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcE
Confidence            7999999999999999999999999998876432111    111223467899999999999888877532     6999


Q ss_pred             EEEcCCCCccc------------------------HHHHHHhCC---CCCcEEEEeeceeeccC----CCCCccCccccc
Q 021331           76 VYDINGREADE------------------------VEPILDALP---NLEQFIYCSSAGVYLKS----DLLPHCESRHKG  124 (314)
Q Consensus        76 vi~~a~~~~~~------------------------~~~~~~~~~---~~~~~i~~Ss~~v~~~~----~~~~~~e~~~~~  124 (314)
                      +||+||.....                        ++.++..+.   ...+++..|+.......    ...+....|..+
T Consensus        91 lVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~~Y~as  170 (260)
T d1h5qa_          91 LIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSS  170 (260)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHHH
T ss_pred             ecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCccccchhhh
Confidence            99999864211                        233444442   33456666664433211    111222268888


Q ss_pred             hhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          125 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       125 k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      |...+.+.+       .+|+++..|.||.|-.+... .............-++         ..+...+|+|++++.++.
T Consensus       171 Kaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~-~~~~~~~~~~~~~~pl---------~R~g~pedvA~~v~fL~S  240 (260)
T d1h5qa_         171 KAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTA-HMDKKIRDHQASNIPL---------NRFAQPEEMTGQAILLLS  240 (260)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG-GSCHHHHHHHHHTCTT---------SSCBCGGGGHHHHHHHHS
T ss_pred             hhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchh-ccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhc
Confidence            988777653       46899999999998765321 1223333444333322         125668999999999997


Q ss_pred             CCc--cCCceEEecCCcc
Q 021331          198 NEK--ASRQVFNISGEKY  213 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~~  213 (314)
                      +..  -.|+++.+.||..
T Consensus       241 ~~s~~itG~~i~VDGG~~  258 (260)
T d1h5qa_         241 DHATYMTGGEYFIDGGQL  258 (260)
T ss_dssp             GGGTTCCSCEEEECTTGG
T ss_pred             chhCCCcCceEEECCCee
Confidence            533  3789999999863

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.52  E-value=8.3e-15  Score=119.66  Aligned_cols=190  Identities=13%  Similarity=0.077  Sum_probs=126.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc----C-CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K-GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~----~-~~d~   75 (314)
                      |||++.||.++++.|+++|++|++.+|+.+....         ++.  ....+..+|+++++++++++++    + ++|+
T Consensus         6 TGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~---------~~~--~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDi   74 (252)
T d1zmta1           6 TNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE---------LEA--FAETYPQLKPMSEQEPAELIEAVTSAYGQVDV   74 (252)
T ss_dssp             SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHH---------HHH--HHHHCTTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------HHh--hhCcEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            8999999999999999999999999987655321         111  1223345788887766665543    2 6999


Q ss_pred             EEEcCCCCcc---------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      +||+||....                     +    ++.++..+.  +..++|++||...+...   |....|..+|...
T Consensus        75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~---~~~~~Y~asKaal  151 (252)
T d1zmta1          75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW---KELSTYTSARAGA  151 (252)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC---TTCHHHHHHHHHH
T ss_pred             EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccc---ccccccccccccH
Confidence            9999875311                     0    233444444  55789999997654322   2222688899887


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCch-------hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHH
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  194 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  194 (314)
                      +.+.+       .+++++..|.||.+-.+.....+       .......+....++         ..+...+|+|.+++.
T Consensus       152 ~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl---------~R~g~pedvA~~v~f  222 (252)
T d1zmta1         152 CTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL---------QRLGTQKELGELVAF  222 (252)
T ss_dssp             HHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSS---------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence            77653       46899999999998776422111       11222333322222         125678999999999


Q ss_pred             HhcCCc--cCCceEEecCCcc
Q 021331          195 VLGNEK--ASRQVFNISGEKY  213 (314)
Q Consensus       195 ~l~~~~--~~~~~~~i~~~~~  213 (314)
                      +++...  ..|+++.+.||..
T Consensus       223 L~S~~s~~iTG~~i~vdGG~~  243 (252)
T d1zmta1         223 LASGSCDYLTGQVFWLAGGFP  243 (252)
T ss_dssp             HHTTSCGGGTTCEEEESTTCC
T ss_pred             HhCchhcCCcCCeEEECCCce
Confidence            997643  3789999999864

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.52  E-value=2.7e-14  Score=117.40  Aligned_cols=196  Identities=15%  Similarity=0.148  Sum_probs=125.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc---cCceEEEEecCCChhhHHHhhhcC-----C
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDRKDYDFVKSSLSAK-----G   72 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~d~~~l~~~~~~~-----~   72 (314)
                      |||++.||.++++.|+++|++|++++|+.+......     +++...   ..++.++.+|++|+++++++++..     +
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   85 (264)
T d1spxa_          11 TGSSNGIGRATAVLFAREGAKVTITGRHAERLEETR-----QQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK   85 (264)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999876532111     111111   246899999999999888877643     6


Q ss_pred             ccEEEEcCCCCcc------------------------c----HHHHHHhCC-CCCcEEEEeec-eeeccCCCCCccCccc
Q 021331           73 FDVVYDINGREAD------------------------E----VEPILDALP-NLEQFIYCSSA-GVYLKSDLLPHCESRH  122 (314)
Q Consensus        73 ~d~vi~~a~~~~~------------------------~----~~~~~~~~~-~~~~~i~~Ss~-~v~~~~~~~~~~e~~~  122 (314)
                      +|++||+||....                        +    ++.++..++ +..++|.++|. +.+..   .|....|.
T Consensus        86 iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~---~~~~~~Y~  162 (264)
T d1spxa_          86 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHA---TPDFPYYS  162 (264)
T ss_dssp             CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSC---CTTSHHHH
T ss_pred             CCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccccc---CCCchhhh
Confidence            9999999986310                        0    233333344 33456666653 32211   22223588


Q ss_pred             cchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCch--------hHHHHHHHHcCCCeecCCCCCceeeeeeHHH
Q 021331          123 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  187 (314)
Q Consensus       123 ~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  187 (314)
                      .+|...+.+.+       .+|+++..|.||.|-.+......        .......+....++         ..+...+|
T Consensus       163 asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl---------~R~g~ped  233 (264)
T d1spxa_         163 IAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA---------GVMGQPQD  233 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT---------SSCBCHHH
T ss_pred             hhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCC---------CCCcCHHH
Confidence            88988777653       46899999999998765321100        01111111111111         23567899


Q ss_pred             HHHHHHHHhcCC---ccCCceEEecCCcc
Q 021331          188 LARAFVQVLGNE---KASRQVFNISGEKY  213 (314)
Q Consensus       188 ~a~~~~~~l~~~---~~~~~~~~i~~~~~  213 (314)
                      +|++++.+++++   .-.|+++.+.||..
T Consensus       234 vA~~v~fL~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         234 IAEVIAFLADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             HHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHhCCcccCCccCceEEeCCChh
Confidence            999999999743   23788999998864

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.52  E-value=3.9e-14  Score=116.07  Aligned_cols=196  Identities=13%  Similarity=0.131  Sum_probs=126.6

Q ss_pred             CCccc--ccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||+|  .||.++++.|+++|++|++.+|+...... .     .+......+..++.+|++|+++++++++..     ++
T Consensus        14 TGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~-~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (256)
T d1ulua_          14 MGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE-A-----EKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGL   87 (256)
T ss_dssp             ESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH-H-----HHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             ECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH-H-----HHhhhccCcccccccccCCHHHHHHHHHHHHHhcCCc
Confidence            79987  79999999999999999988887543211 0     112222356788999999998888877532     69


Q ss_pred             cEEEEcCCCCcc------------------------cHHHHHHh----CCCCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           74 DVVYDINGREAD------------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~~~~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      |++||+|+....                        +...+.+.    +++..++|++||......   .|....|..+|
T Consensus        88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~---~~~~~~Y~asK  164 (256)
T d1ulua_          88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV---VPKYNVMAIAK  164 (256)
T ss_dssp             EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB---CTTCHHHHHHH
T ss_pred             eEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCC---CCCchHHHHHH
Confidence            999999986321                        01122222    223357999998665432   22223688889


Q ss_pred             hhHHHHHH-------hcCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          126 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       126 ~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      ...+.+.+       .+|+++..+.||.+..+.... .........+....++         ..+...+|+|++++.++.
T Consensus       165 aal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~fL~S  235 (256)
T d1ulua_         165 AALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL---------RRNITQEEVGNLGLFLLS  235 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhC
Confidence            88777653       468999999999987764221 1122333333332222         125568999999999997


Q ss_pred             CCc--cCCceEEecCCccc
Q 021331          198 NEK--ASRQVFNISGEKYV  214 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~~~  214 (314)
                      ...  -.|+++.+.||..+
T Consensus       236 ~~s~~itG~~i~VDGG~~~  254 (256)
T d1ulua_         236 PLASGITGEVVYVDAGYHI  254 (256)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             chhCCccCCeEEECcCEeC
Confidence            633  37889999998654

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.51  E-value=9.8e-14  Score=114.60  Aligned_cols=198  Identities=17%  Similarity=0.143  Sum_probs=130.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++++|+.+.....+.    ..+.+....+.++.+|++|++++.++++..     ++|+
T Consensus        24 TGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~----~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idi   99 (272)
T d1g0oa_          24 TGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVV----AAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI   99 (272)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHH----HHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCc
Confidence            8999999999999999999999999988654221111    123334567899999999998888877532     6899


Q ss_pred             EEEcCCCCccc------------------------HHHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccchhhHHHH
Q 021331           76 VYDINGREADE------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESV  131 (314)
Q Consensus        76 vi~~a~~~~~~------------------------~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~  131 (314)
                      +||+++.....                        .+.++..+....++++++|...  .....+....|..+|...+.+
T Consensus       100 lV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~--~~~~~~~~~~Y~asKaal~~l  177 (272)
T d1g0oa_         100 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG--QAKAVPKHAVYSGSKGAIETF  177 (272)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG--TCSSCSSCHHHHHHHHHHHHH
T ss_pred             cccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccc--ccccccchhhHHHHHHHHHHH
Confidence            99999874211                        3445555555567787777432  112222223588889887777


Q ss_pred             HH-------hcCCceEEEecCeeeCCC----------CCCch-hHHHHHH-HHcCCCeecCCCCCceeeeeeHHHHHHHH
Q 021331          132 LE-------SKGVNWTSLRPVYIYGPL----------NYNPV-EEWFFHR-LKAGRPIPIPGSGIQVTQLGHVKDLARAF  192 (314)
Q Consensus       132 ~~-------~~~~~~~ilR~~~v~g~~----------~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  192 (314)
                      .+       .+|+++..|.||.+-.+.          ..... ....... .....+  +       ..+...+|+|.++
T Consensus       178 tk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P--l-------gR~~~peevA~~v  248 (272)
T d1g0oa_         178 ARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP--L-------RRVGLPIDIARVV  248 (272)
T ss_dssp             HHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT--T-------CSCBCHHHHHHHH
T ss_pred             HHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCC--C-------CCCcCHHHHHHHH
Confidence            64       468999999999886541          00000 0111110 111111  1       2467899999999


Q ss_pred             HHHhcCCc--cCCceEEecCCcc
Q 021331          193 VQVLGNEK--ASRQVFNISGEKY  213 (314)
Q Consensus       193 ~~~l~~~~--~~~~~~~i~~~~~  213 (314)
                      +.++....  -.|.++.+.||..
T Consensus       249 ~fL~s~~s~~itG~~i~vDGG~~  271 (272)
T d1g0oa_         249 CFLASNDGGWVTGKVIGIDGGAC  271 (272)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHhCchhcCccCceEeECCCCC
Confidence            99997533  3788999998864

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.51  E-value=2.3e-14  Score=115.92  Aligned_cols=173  Identities=14%  Similarity=0.158  Sum_probs=120.6

Q ss_pred             CCcccccHHHHHHHHHHCCCe-------EEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC--
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQ-------VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~--   71 (314)
                      |||++.||.++++.|+++|++       |++.+|+.+......     .++......+.++.+|++|++++++++++.  
T Consensus         7 TGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~-----~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           7 TGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKIS-----LECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             ETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHH-----HHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            799999999999999999987       888888876532111     123333467889999999999888777542  


Q ss_pred             ---CccEEEEcCCCCccc------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccc
Q 021331           72 ---GFDVVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRH  122 (314)
Q Consensus        72 ---~~d~vi~~a~~~~~~------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (314)
                         ++|++||+||.....                        ++.++..|.  +..++|++||...+..   .|....|.
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~---~~~~~~Y~  158 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA---FRHSSIYC  158 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---CTTCHHHH
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCC---CCCChHHH
Confidence               699999999974211                        344555554  5578999999765432   22223688


Q ss_pred             cchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHH
Q 021331          123 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  195 (314)
Q Consensus       123 ~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  195 (314)
                      .+|...+.+.+       .+|+++..+.||.+-.+....               +    .......+...+|+|++++.+
T Consensus       159 asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~---------------~----~~~~~~~~~~PedvA~~v~~l  219 (240)
T d2bd0a1         159 MSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK---------------V----DDEMQALMMMPEDIAAPVVQA  219 (240)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC---------------C----CSTTGGGSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhh---------------c----CHhhHhcCCCHHHHHHHHHHH
Confidence            88977766653       468999999999887652110               0    001112355689999999999


Q ss_pred             hcCCc
Q 021331          196 LGNEK  200 (314)
Q Consensus       196 l~~~~  200 (314)
                      +.++.
T Consensus       220 ~s~~~  224 (240)
T d2bd0a1         220 YLQPS  224 (240)
T ss_dssp             HTSCT
T ss_pred             HcCCc
Confidence            98754

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.51  E-value=3.2e-14  Score=117.50  Aligned_cols=198  Identities=16%  Similarity=0.146  Sum_probs=129.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc---cCceEEEEecCCChhhHHHhhhcC-----C
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDRKDYDFVKSSLSAK-----G   72 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~d~~~l~~~~~~~-----~   72 (314)
                      |||++.||.++++.|+++|++|++++|+.++.....     +++.+.   ..++..+.+|++|++++++++++.     +
T Consensus        10 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   84 (274)
T d1xhla_          10 TGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETK-----QQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGK   84 (274)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999876532111     111111   246889999999999888877643     6


Q ss_pred             ccEEEEcCCCCccc--------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccc
Q 021331           73 FDVVYDINGREADE--------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKG  124 (314)
Q Consensus        73 ~d~vi~~a~~~~~~--------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (314)
                      +|++||+||.....                          ++.++..+.  +..+++++||.......   +-...|..+
T Consensus        85 iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~---~~~~~Y~as  161 (274)
T d1xhla_          85 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAH---SGYPYYACA  161 (274)
T ss_dssp             CCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCC---TTSHHHHHH
T ss_pred             ceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccC---CCCceehhh
Confidence            89999999863110                          233333343  44567777775443221   222268888


Q ss_pred             hhhHHHHHH-------hcCCceEEEecCeeeCCCCC----C-chhHHHHHHHHcC-CCeecCCCCCceeeeeeHHHHHHH
Q 021331          125 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNY----N-PVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARA  191 (314)
Q Consensus       125 k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~----~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~  191 (314)
                      |...+.+.+       .+|+++..|.||.|-.|...    . .........+... ..+++       ..+...+|+|++
T Consensus       162 Kaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl-------gR~g~pediA~~  234 (274)
T d1xhla_         162 KAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV-------GHCGKPEEIANI  234 (274)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-------SSCBCHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCC-------CCCcCHHHHHHH
Confidence            988777653       46899999999998765210    0 0111111111111 11222       235679999999


Q ss_pred             HHHHhcCC---ccCCceEEecCCcc
Q 021331          192 FVQVLGNE---KASRQVFNISGEKY  213 (314)
Q Consensus       192 ~~~~l~~~---~~~~~~~~i~~~~~  213 (314)
                      ++.+++.+   .-.|+++.+.||..
T Consensus       235 v~fL~S~d~s~~itG~~i~vDGG~~  259 (274)
T d1xhla_         235 IVFLADRNLSSYIIGQSIVADGGST  259 (274)
T ss_dssp             HHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             HHHHcCCccccCccCcEEEeCcCHH
Confidence            99998642   23789999999864

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.47  E-value=2.8e-14  Score=118.05  Aligned_cols=193  Identities=19%  Similarity=0.163  Sum_probs=126.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      |||++.||.++++.|+++|++|++++|+.+....        ...+...++..+.+|+++++++++++++.     .+|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~--------~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi   82 (276)
T d1bdba_          11 TGGASGLGRALVDRFVAEGAKVAVLDKSAERLAE--------LETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT   82 (276)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence            7999999999999999999999999998765321        11223467899999999998888776532     6999


Q ss_pred             EEEcCCCCcc-------------------------c----HHHHHHhCC-CCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           76 VYDINGREAD-------------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        76 vi~~a~~~~~-------------------------~----~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      +||+||....                         +    ++.++..+. +..++|++||...+-.   .|....|..+|
T Consensus        83 lvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~---~~~~~~Y~asK  159 (276)
T d1bdba_          83 LIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYP---NGGGPLYTAAK  159 (276)
T ss_dssp             EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTST---TSSCHHHHHHH
T ss_pred             ccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccC---CCCCchHHHHH
Confidence            9999985210                         0    233344443 3357888887543321   22223688888


Q ss_pred             hhHHHHHHh------cCCceEEEecCeeeCCCCCCch---------hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHH
Q 021331          126 LNTESVLES------KGVNWTSLRPVYIYGPLNYNPV---------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  190 (314)
Q Consensus       126 ~~~e~~~~~------~~~~~~ilR~~~v~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  190 (314)
                      ...+.+.+.      .++++..|.||.|-.+-.....         ...+...+....+  +       ..+...+|+|.
T Consensus       160 aal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~P--l-------gR~g~peeva~  230 (276)
T d1bdba_         160 HAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLP--I-------GRMPEVEEYTG  230 (276)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCT--T-------SSCCCGGGGSH
T ss_pred             HHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCC--C-------CCCcCHHHHHH
Confidence            877766532      2489999999998665211100         0011122221111  1       23556899999


Q ss_pred             HHHHHhcCC---ccCCceEEecCCcc
Q 021331          191 AFVQVLGNE---KASRQVFNISGEKY  213 (314)
Q Consensus       191 ~~~~~l~~~---~~~~~~~~i~~~~~  213 (314)
                      +++.++..+   .-.|++++|.||..
T Consensus       231 ~v~fL~S~~~a~~itG~~i~VDGG~~  256 (276)
T d1bdba_         231 AYVFFATRGDAAPATGALLNYDGGLG  256 (276)
T ss_dssp             HHHHHHCHHHHTTCSSCEEEESSSGG
T ss_pred             HHHHHcCCcccCCeeCcEEEECcChh
Confidence            999888632   24789999999854

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.47  E-value=1.3e-13  Score=113.81  Aligned_cols=199  Identities=16%  Similarity=0.161  Sum_probs=127.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc---cCceEEEEecCCChhhHHHhhhcC-----C
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDRKDYDFVKSSLSAK-----G   72 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~d~~~l~~~~~~~-----~   72 (314)
                      |||++.||.++++.|+++|++|++++|+.++.....     +++.+.   ..++..+.+|++|+++++++++..     +
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   85 (272)
T d1xkqa_          11 TGSSNGIGRTTAILFAQEGANVTITGRSSERLEETR-----QIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGK   85 (272)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999876532111     011111   246889999999999888877643     6


Q ss_pred             ccEEEEcCCCCcc------------------------c----HHHHHHhCC-CCCcEEEEee-ceeeccCCCCCccCccc
Q 021331           73 FDVVYDINGREAD------------------------E----VEPILDALP-NLEQFIYCSS-AGVYLKSDLLPHCESRH  122 (314)
Q Consensus        73 ~d~vi~~a~~~~~------------------------~----~~~~~~~~~-~~~~~i~~Ss-~~v~~~~~~~~~~e~~~  122 (314)
                      +|++||+||....                        +    ++.++..+. +..++|.++| .+....   .|....|.
T Consensus        86 iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~---~~~~~~Y~  162 (272)
T d1xkqa_          86 IDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA---QPDFLYYA  162 (272)
T ss_dssp             CCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC---CCSSHHHH
T ss_pred             ceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccC---CCCcchhh
Confidence            9999999986321                        0    222333333 3345555555 332211   22223688


Q ss_pred             cchhhHHHHHH-------hcCCceEEEecCeeeCCCCC----C-chhHHHHHHHHc-CCCeecCCCCCceeeeeeHHHHH
Q 021331          123 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY----N-PVEEWFFHRLKA-GRPIPIPGSGIQVTQLGHVKDLA  189 (314)
Q Consensus       123 ~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~----~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a  189 (314)
                      .+|...+.+.+       .+|+++..|.||.|-.+...    . ............ ...+++       ..+...+|+|
T Consensus       163 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-------gR~g~pediA  235 (272)
T d1xkqa_         163 IAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI-------GAAGKPEHIA  235 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-------SSCBCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC-------CCCcCHHHHH
Confidence            88988777653       46899999999988765210    0 011111111111 111222       2366789999


Q ss_pred             HHHHHHhcCC--c-cCCceEEecCCccc
Q 021331          190 RAFVQVLGNE--K-ASRQVFNISGEKYV  214 (314)
Q Consensus       190 ~~~~~~l~~~--~-~~~~~~~i~~~~~~  214 (314)
                      ++++.++..+  . -.|+++.+.||..+
T Consensus       236 ~~v~fL~S~~as~~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         236 NIILFLADRNLSFYILGQSIVADGGTSL  263 (272)
T ss_dssp             HHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence            9999999743  2 37899999998764

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=8.4e-14  Score=113.82  Aligned_cols=180  Identities=17%  Similarity=0.154  Sum_probs=116.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCChhhHHHhhhcC-----Cc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~-----~~   73 (314)
                      |||++.||.++++.|+++|++|++.+|+.+......     +++...  ..++.++.+|++++++++++++..     ++
T Consensus        16 TGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~i   90 (257)
T d1xg5a_          16 TGASGGIGAAVARALVQQGLKVVGCARTVGNIEELA-----AECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV   90 (257)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            799999999999999999999999999876532211     112221  246888999999999888877542     69


Q ss_pred             cEEEEcCCCCccc------------------------HHHHHHhCC----CCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           74 DVVYDINGREADE------------------------VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        74 d~vi~~a~~~~~~------------------------~~~~~~~~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      |++||+||.....                        ++.++..+.    ...++|++||...+.... .+....|..+|
T Consensus        91 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p-~~~~~~Y~~sK  169 (257)
T d1xg5a_          91 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLP-LSVTHFYSATK  169 (257)
T ss_dssp             SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCS-CGGGHHHHHHH
T ss_pred             CEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCC-CcccHHHHHHH
Confidence            9999999874211                        233333332    346899999976432111 11111488888


Q ss_pred             hhHHHHHH---------hcCCceEEEecCeeeCCCCCCchhHHH----HHHHHcCCCeecCCCCCceeeeeeHHHHHHHH
Q 021331          126 LNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWF----FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  192 (314)
Q Consensus       126 ~~~e~~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  192 (314)
                      ...+.+.+         .+++++..+.||.+-.+     +...+    .+.....    +     ....+...+|+|+++
T Consensus       170 aal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~-----~~~~~~~~~~~~~~~~----~-----~~~r~~~pedvA~~v  235 (257)
T d1xg5a_         170 YAVTALTEGLRQELREAQTHIRATCISPGVVETQ-----FAFKLHDKDPEKAAAT----Y-----EQMKCLKPEDVAEAV  235 (257)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSS-----HHHHHTTTCHHHHHHH----H-----C---CBCHHHHHHHH
T ss_pred             HHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCCh-----hhhhcChhhHHHHHhc----C-----CCCCCcCHHHHHHHH
Confidence            77766542         35788999999876543     11111    0111110    1     113467799999999


Q ss_pred             HHHhcCCc
Q 021331          193 VQVLGNEK  200 (314)
Q Consensus       193 ~~~l~~~~  200 (314)
                      +.+++++.
T Consensus       236 ~fL~s~~a  243 (257)
T d1xg5a_         236 IYVLSTPA  243 (257)
T ss_dssp             HHHHHSCT
T ss_pred             HHHhCChh
Confidence            99998754

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.44  E-value=6.5e-14  Score=117.12  Aligned_cols=197  Identities=17%  Similarity=0.189  Sum_probs=127.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhh-hhccCceEEEEecCCChhhHHHhhhc-----CCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~l~~~~~~-----~~~d   74 (314)
                      |||+|.||.++++.|+++|++|++++|+.........     ++ ......+.++.+|+++++++++++..     -++|
T Consensus        31 TGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~-----~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD  105 (294)
T d1w6ua_          31 TGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAE-----QISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPN  105 (294)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH-----HHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccc
Confidence            7999999999999999999999999998765322111     11 12246788999999999988776643     2699


Q ss_pred             EEEEcCCCCccc------------------------HHHHHHhCC---CCCcEEEEeeceeeccCCCCCccCccccchhh
Q 021331           75 VVYDINGREADE------------------------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLN  127 (314)
Q Consensus        75 ~vi~~a~~~~~~------------------------~~~~~~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~  127 (314)
                      ++||++|.....                        ....+..+.   ....++.+|+........   ....|..+|..
T Consensus       106 ilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~---~~~~YsasKaa  182 (294)
T d1w6ua_         106 IVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG---FVVPSASAKAG  182 (294)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT---TCHHHHHHHHH
T ss_pred             hhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhccc---ccchHHHHHHH
Confidence            999999874221                        011111111   344566666654332222   22258888988


Q ss_pred             HHHHHH-------hcCCceEEEecCeeeCCCCCCc--hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcC
Q 021331          128 TESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  198 (314)
Q Consensus       128 ~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~  198 (314)
                      .+.+.+       .+|+++..|.||.|-.+.....  -............++         ..+...+|+|+++..++.+
T Consensus       183 l~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pediA~~v~fL~sd  253 (294)
T d1w6ua_         183 VEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC---------GRLGTVEELANLAAFLCSD  253 (294)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT---------SSCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCC---------CCCCCHHHHHHHHHHHhCc
Confidence            877764       4689999999999977642111  011122333322222         2356789999999999975


Q ss_pred             Cc--cCCceEEecCCccc
Q 021331          199 EK--ASRQVFNISGEKYV  214 (314)
Q Consensus       199 ~~--~~~~~~~i~~~~~~  214 (314)
                      ..  -.|.++.+.||..+
T Consensus       254 ~s~~itG~~i~vDGG~~l  271 (294)
T d1w6ua_         254 YASWINGAVIKFDGGEEV  271 (294)
T ss_dssp             GGTTCCSCEEEESTTHHH
T ss_pred             hhcCCCCcEEEECCChhh
Confidence            32  47899999998643

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.41  E-value=6.4e-13  Score=108.91  Aligned_cols=181  Identities=16%  Similarity=0.128  Sum_probs=119.4

Q ss_pred             CCcccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~----~~d~   75 (314)
                      |||+|.||.+++++|.++|+ +|++++|+...... . .....+++....++.++.+|++|++++.++++..    .+|.
T Consensus        15 TGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~-~-~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~i~~   92 (259)
T d2fr1a1          15 TGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADG-A-GELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSA   92 (259)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTT-H-HHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHH-H-HHHHHHHHhccccccccccccchHHHHHHhhccccccccccc
Confidence            79999999999999999998 57778886433110 0 0011233334567999999999999999887643    5899


Q ss_pred             EEEcCCCCc--------------------ccHHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHH-
Q 021331           76 VYDINGREA--------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVL-  132 (314)
Q Consensus        76 vi~~a~~~~--------------------~~~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~-  132 (314)
                      |||+++...                    .+..++.+++.  ...++|++||....-....   ...|..+|...+.+. 
T Consensus        93 vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~---~~~YaAaka~l~~la~  169 (259)
T d2fr1a1          93 VFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG---LGGYAPGNAYLDGLAQ  169 (259)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT---CTTTHHHHHHHHHHHH
T ss_pred             cccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcc---cHHHHHHHHhHHHHHH
Confidence            999998732                    22345555555  5678999999655422221   125888898877765 


Q ss_pred             --HhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 021331          133 --ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  200 (314)
Q Consensus       133 --~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~  200 (314)
                        +..|++++.|.||.+.+++.....    ..     ..+.-     .-...+..+++++++..++..+.
T Consensus       170 ~~~~~Gi~v~~I~pg~~~~~g~~~~~----~~-----~~~~~-----~G~~~~~~~~~~~~l~~~l~~~~  225 (259)
T d2fr1a1         170 QRRSDGLPATAVAWGTWAGSGMAEGP----VA-----DRFRR-----HGVIEMPPETACRALQNALDRAE  225 (259)
T ss_dssp             HHHHTTCCCEEEEECCBC---------------------CTT-----TTEECBCHHHHHHHHHHHHHTTC
T ss_pred             HHHhCCCCEEECCCCcccCCccccch----HH-----HHHHh-----cCCCCCCHHHHHHHHHHHHhCCC
Confidence              357899999999988776432110    00     00110     11346789999999999998765

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=5.1e-14  Score=114.03  Aligned_cols=172  Identities=15%  Similarity=0.178  Sum_probs=118.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc----C-CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K-GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~----~-~~d~   75 (314)
                      |||++.||.++++.|+++|++|++.+|+.++.....     +++.+...++.++.+|++|+++++.+++.    . .+|+
T Consensus        13 TGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~-----~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idi   87 (244)
T d1yb1a_          13 TGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETA-----AKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI   87 (244)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCce
Confidence            799999999999999999999999999876643221     23334456899999999999888877753    2 5999


Q ss_pred             EEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhHH
Q 021331           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTE  129 (314)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e  129 (314)
                      +||+||....                    +    ++.++..+.  +..++|++||...+..   .|....|..+|....
T Consensus        88 linnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~---~~~~~~Y~asKaal~  164 (244)
T d1yb1a_          88 LVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS---VPFLLAYCSSKFAAV  164 (244)
T ss_dssp             EEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC---HHHHHHHHHHHHHHH
T ss_pred             eEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCC---CCCcHHHHHHHHHHH
Confidence            9999997421                    1    233444444  5568999999765422   222236888898876


Q ss_pred             HHHH----h------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          130 SVLE----S------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       130 ~~~~----~------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      .+.+    +      .|+.++.+.||.|-.+.....             ..       ....++..+|+|+.+...+..+
T Consensus       165 ~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~-------------~~-------~~~~~~~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         165 GFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP-------------ST-------SLGPTLEPEEVVNRLMHGILTE  224 (244)
T ss_dssp             HHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT-------------HH-------HHCCCCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc-------------Cc-------cccCCCCHHHHHHHHHHHHhcC
Confidence            6653    1      468999999997654421111             00       1123446799999998887664


Q ss_pred             c
Q 021331          200 K  200 (314)
Q Consensus       200 ~  200 (314)
                      .
T Consensus       225 ~  225 (244)
T d1yb1a_         225 Q  225 (244)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.38  E-value=7.6e-13  Score=110.43  Aligned_cols=189  Identities=12%  Similarity=0.057  Sum_probs=121.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCC-CCchhhhhccCceEEEEecCCChhhHHHhhh----cC-Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG-ESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----AK-GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~----~~-~~d   74 (314)
                      |||++.||.++++.|+++|++|++.+|+.+........ ...+...+.......+.+|+.|.++.+++++    +. ++|
T Consensus        13 TGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~G~iD   92 (302)
T d1gz6a_          13 TGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRID   92 (302)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHHTSCCC
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHcCCCC
Confidence            89999999999999999999999999876542111110 0011112222345567788888776665554    23 699


Q ss_pred             EEEEcCCCCccc------------------------HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~~~------------------------~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      ++||+||.....                        ++.++..|.  +..++|++||...+-..   |....|..+|...
T Consensus        93 iLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~---~~~~~Y~asKaal  169 (302)
T d1gz6a_          93 VVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN---FGQANYSAAKLGL  169 (302)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---TTCHHHHHHHHHH
T ss_pred             EEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCC---CCcHHHHHHHHHH
Confidence            999999974221                        334444454  55799999996654222   2222689999887


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc-
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-  200 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-  200 (314)
                      +.+.+       .+|+++..|.|+.+-.+.  ....+.                  ....++..+|+|.+++.++.... 
T Consensus       170 ~~lt~~la~E~~~~gIrVN~I~PG~~~t~~--~~~~~~------------------~~~~~~~PedvA~~v~fL~S~~a~  229 (302)
T d1gz6a_         170 LGLANTLVIEGRKNNIHCNTIAPNAGSRMT--ETVMPE------------------DLVEALKPEYVAPLVLWLCHESCE  229 (302)
T ss_dssp             HHHHHHHHHHTGGGTEEEEEEEEECCSTTT--GGGSCH------------------HHHHHSCGGGTHHHHHHHTSTTCC
T ss_pred             HHHHHHHHHHHhccCCceeeeCCCCCCcch--hhcCcH------------------hhHhcCCHHHHHHHHHHHcCCCcC
Confidence            77653       468999999998653221  111000                  11223457999999999886432 


Q ss_pred             cCCceEEecCCc
Q 021331          201 ASRQVFNISGEK  212 (314)
Q Consensus       201 ~~~~~~~i~~~~  212 (314)
                      ..|+++.+.||.
T Consensus       230 itG~~i~vdGG~  241 (302)
T d1gz6a_         230 ENGGLFEVGAGW  241 (302)
T ss_dssp             CCSCEEEEETTE
T ss_pred             CCCcEEEeCCCc
Confidence            368889888875

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1e-12  Score=108.90  Aligned_cols=198  Identities=17%  Similarity=0.166  Sum_probs=120.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEE---cCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC---Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFT---RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~---r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~---~~d   74 (314)
                      |||++.||.++++.|+++|.+|+.+.   |+.+.... +. ...+.+.....++..+.+|++|++++..+++..   .+|
T Consensus         8 TGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~-l~-~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~id   85 (285)
T d1jtva_           8 TGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGR-LW-EAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRVD   85 (285)
T ss_dssp             SCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHH-HH-HHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSCCS
T ss_pred             ccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHH-HH-HHHHHHhccCCceEEEeccccchHhhhhhhhhccccchh
Confidence            89999999999999999998765554   33222110 00 000111122467899999999999999887643   589


Q ss_pred             EEEEcCCCCcc--------------------c----HHHHHHhCC--CCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~~~~~~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      ++||+++....                    +    ++.++..|.  +..++|++||....-.   .|....|..+|...
T Consensus        86 ilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~---~~~~~~Y~asKaal  162 (285)
T d1jtva_          86 VLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG---LPFNDVYCASKFAL  162 (285)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC---CTTCHHHHHHHHHH
T ss_pred             hhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCC---CCCchHHHHHHHHH
Confidence            99999987321                    1    334444454  5679999999655322   22233689999887


Q ss_pred             HHHHH-------hcCCceEEEecCeeeCCCCCCch--------------hHHHHHHHHcCCCeecCCCCCceeeeeeHHH
Q 021331          129 ESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--------------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  187 (314)
Q Consensus       129 e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  187 (314)
                      +.+.+       .+|+++..|.||.|-.+......              ...+...+...+..+       .......+|
T Consensus       163 ~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~Pee  235 (285)
T d1jtva_         163 EGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVF-------REAAQNPEE  235 (285)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHH-------HHHCBCHHH
T ss_pred             HHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhh-------cccCCCHHH
Confidence            77653       46899999999988655211100              000111111111110       112456899


Q ss_pred             HHHHHHHHhcCCccCCceEEecCCc
Q 021331          188 LARAFVQVLGNEKASRQVFNISGEK  212 (314)
Q Consensus       188 ~a~~~~~~l~~~~~~~~~~~i~~~~  212 (314)
                      +|++++.++..+.+  ...++++..
T Consensus       236 VA~~v~~~~~~~~p--~~ry~~g~~  258 (285)
T d1jtva_         236 VAEVFLTALRAPKP--TLRYFTTER  258 (285)
T ss_dssp             HHHHHHHHHHCSSC--CSEEESCST
T ss_pred             HHHHHHHHHhCCCC--CeEEecHHH
Confidence            99999999987652  345555543

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.35  E-value=4.8e-13  Score=109.02  Aligned_cols=192  Identities=17%  Similarity=0.076  Sum_probs=123.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCC-ChhhHHHhhhc----C-Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSA----K-GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-d~~~l~~~~~~----~-~~d   74 (314)
                      |||++.||.+++++|+++|++|+++.|+.++......    ..-.....++.++.+|++ +.+++++++++    + ++|
T Consensus        11 TGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iD   86 (254)
T d1sbya1          11 VAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAE----LKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVD   86 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHH----HHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCC
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHH----HHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999887765321100    000111357889999997 55556655543    2 699


Q ss_pred             EEEEcCCCCcc------------c----HHHHHHhCC-----CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHH
Q 021331           75 VVYDINGREAD------------E----VEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLE  133 (314)
Q Consensus        75 ~vi~~a~~~~~------------~----~~~~~~~~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~  133 (314)
                      ++||+||....            +    ++.++..+.     ...++|++||...+..   .+....|..+|.....+.+
T Consensus        87 ilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~---~~~~~~Y~asKaal~~~t~  163 (254)
T d1sbya1          87 ILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA---IHQVPVYSASKAAVVSFTN  163 (254)
T ss_dssp             EEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC---CTTSHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC---CCCCHHHHHHHHHHHHHHH
Confidence            99999997422            1    334444443     2357999999665432   2222368888987766653


Q ss_pred             -------hcCCceEEEecCeeeCCCC--CCch--hHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCccC
Q 021331          134 -------SKGVNWTSLRPVYIYGPLN--YNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  202 (314)
Q Consensus       134 -------~~~~~~~ilR~~~v~g~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~  202 (314)
                             .+++++..|.||.|..+..  ....  ....+.....            .+.....+++|++++.+++... .
T Consensus       164 ~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~e~va~~~~~~~~~~~-t  230 (254)
T d1sbya1         164 SLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL------------SHPTQTSEQCGQNFVKAIEANK-N  230 (254)
T ss_dssp             HHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT------------TSCCEEHHHHHHHHHHHHHHCC-T
T ss_pred             HHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccc------------cCCCCCHHHHHHHHHHhhhCCC-C
Confidence                   4689999999999986510  0000  0000000000            1134468999999998887654 7


Q ss_pred             CceEEecCCc
Q 021331          203 RQVFNISGEK  212 (314)
Q Consensus       203 ~~~~~i~~~~  212 (314)
                      |.++.+.+|.
T Consensus       231 G~vi~vdgG~  240 (254)
T d1sbya1         231 GAIWKLDLGT  240 (254)
T ss_dssp             TCEEEEETTE
T ss_pred             CCEEEECCCE
Confidence            8899999884

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.31  E-value=1.2e-11  Score=100.97  Aligned_cols=196  Identities=15%  Similarity=0.141  Sum_probs=127.3

Q ss_pred             CCccc--ccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-----CCc
Q 021331            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (314)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-----~~~   73 (314)
                      |||+|  .||.++++.|+++|++|++.+|+..... ..     .++.........+..|..+..+..+.+..     -.+
T Consensus        11 TGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (258)
T d1qsga_          11 TGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKG-RV-----EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF   84 (258)
T ss_dssp             CCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHH-HH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred             ECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHH-HH-----HHHHhhcCCcceeecccchHHHHHHHHHHhhhccccc
Confidence            79998  7899999999999999999999854321 11     11222235677888899887766665542     258


Q ss_pred             cEEEEcCCCCccc-------------------------HHHHHHh----CCCCCcEEEEeeceeeccCCCCCccCccccc
Q 021331           74 DVVYDINGREADE-------------------------VEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCESRHKG  124 (314)
Q Consensus        74 d~vi~~a~~~~~~-------------------------~~~~~~~----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (314)
                      |++||+++.....                         ...+...    +.+...+|++||......   .|....|..+
T Consensus        85 d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~---~~~~~~Y~~s  161 (258)
T d1qsga_          85 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA---IPNYNVMGLA  161 (258)
T ss_dssp             EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB---CTTTTHHHHH
T ss_pred             ceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccC---CCCcHHHHHH
Confidence            9999998764211                         1112222    223346888888654322   2222358999


Q ss_pred             hhhHHHHHH-------hcCCceEEEecCeeeCCCCCCc-hhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHh
Q 021331          125 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  196 (314)
Q Consensus       125 k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l  196 (314)
                      |...+.+.+       .+|+++..|+||.|..+..... .............++         ..+...+|+|.++..++
T Consensus       162 Kaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl---------~R~~~peeia~~v~fL~  232 (258)
T d1qsga_         162 KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI---------RRTVTIEDVGNSAAFLC  232 (258)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCC---------CCCcCHHHHHHHHHHHh
Confidence            988887764       3679999999999987743221 112222222222221         12566899999999999


Q ss_pred             cCCc--cCCceEEecCCccc
Q 021331          197 GNEK--ASRQVFNISGEKYV  214 (314)
Q Consensus       197 ~~~~--~~~~~~~i~~~~~~  214 (314)
                      .+..  -.|.++.+.||..+
T Consensus       233 s~~s~~itG~~i~vDGG~~i  252 (258)
T d1qsga_         233 SDLSAGISGEVVHVDGGFSI  252 (258)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CchhcCccCceEEECcCHHH
Confidence            7632  47899999999754

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.30  E-value=1.4e-11  Score=99.49  Aligned_cols=185  Identities=16%  Similarity=0.170  Sum_probs=120.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhh----cCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----AKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~----~~~~d~v   76 (314)
                      |||++.||.++++.|+++|++|++++|+.+.                 .+.....+|+.+......+..    ....+.+
T Consensus         7 TGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-----------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~   69 (241)
T d1uaya_           7 TGGASGLGRAAALALKARGYRVVVLDLRREG-----------------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   69 (241)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCccc-----------------ccceEeeccccchhhhHHHHHhhhccccccch
Confidence            7999999999999999999999999998755                 346677899988765555443    2345555


Q ss_pred             EEcCCCCcc------------------------c----HHHHHHh------CC--CCCcEEEEeeceeeccCCCCCccCc
Q 021331           77 YDINGREAD------------------------E----VEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHCES  120 (314)
Q Consensus        77 i~~a~~~~~------------------------~----~~~~~~~------~~--~~~~~i~~Ss~~v~~~~~~~~~~e~  120 (314)
                      ++.++....                        .    ++.++..      +.  +..++|++||...+...   |....
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~---~~~~~  146 (241)
T d1uaya_          70 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ---IGQAA  146 (241)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC---TTCHH
T ss_pred             hhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCC---CCchh
Confidence            554433110                        0    1122222      11  33589999997654322   22226


Q ss_pred             cccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHH
Q 021331          121 RHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  193 (314)
Q Consensus       121 ~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  193 (314)
                      |..+|...+.+.+       .+|+++..|.||.+..+.... .............+  ..+      .+...+|+|++++
T Consensus       147 Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~-~~~~~~~~~~~~~~--~~~------R~g~pedvA~~v~  217 (241)
T d1uaya_         147 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG-LPEKAKASLAAQVP--FPP------RLGRPEEYAALVL  217 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT-SCHHHHHHHHTTCC--SSC------SCCCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccch-hhhhHHHHHHhcCC--CCC------CCcCHHHHHHHHH
Confidence            8999988877764       468999999999986652111 11222222222222  111      2556899999999


Q ss_pred             HHhcCCccCCceEEecCCccc
Q 021331          194 QVLGNEKASRQVFNISGEKYV  214 (314)
Q Consensus       194 ~~l~~~~~~~~~~~i~~~~~~  214 (314)
                      .+++.+...|+++.+.||..+
T Consensus       218 fL~s~~~iTG~~i~VDGG~~m  238 (241)
T d1uaya_         218 HILENPMLNGEVVRLDGALRM  238 (241)
T ss_dssp             HHHHCTTCCSCEEEESTTCCC
T ss_pred             HHHhCCCCCCCEEEECCcccC
Confidence            999865558899999988643

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.30  E-value=5.3e-13  Score=109.33  Aligned_cols=191  Identities=15%  Similarity=0.107  Sum_probs=120.0

Q ss_pred             CCcccccHHHHHHHHHH---CCCeEEEEEcCCcccccCCCCCCchhhhhc--cCceEEEEecCCChhhHHHhhhc-----
Q 021331            1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----   70 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~-----   70 (314)
                      |||++.||.++++.|.+   +|++|++++|+.+......     +++...  ..++.++.+|++|+++++++++.     
T Consensus        12 TGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~   86 (259)
T d1oaaa_          12 TGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLK-----EELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP   86 (259)
T ss_dssp             SSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHH-----HHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred             eCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHH-----HHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhh
Confidence            89999999999999986   6999999999876532111     111111  24688899999999988887642     


Q ss_pred             ----CCccEEEEcCCCCc-----------------------cc----HHHHHHhCCC----CCcEEEEeeceeeccCCCC
Q 021331           71 ----KGFDVVYDINGREA-----------------------DE----VEPILDALPN----LEQFIYCSSAGVYLKSDLL  115 (314)
Q Consensus        71 ----~~~d~vi~~a~~~~-----------------------~~----~~~~~~~~~~----~~~~i~~Ss~~v~~~~~~~  115 (314)
                          ..+|++||++|...                       .+    ++.++..+..    ..++|++||...+..   .
T Consensus        87 ~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~---~  163 (259)
T d1oaaa_          87 RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP---Y  163 (259)
T ss_dssp             CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC---C
T ss_pred             hhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC---C
Confidence                14688999987521                       01    3344445552    247999999655422   2


Q ss_pred             CccCccccchhhHHHHHH-----hcCCceEEEecCeeeCCCCCC----chhHHHHHHHHcCCCeecCCCCCceeeeeeHH
Q 021331          116 PHCESRHKGKLNTESVLE-----SKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  186 (314)
Q Consensus       116 ~~~e~~~~~k~~~e~~~~-----~~~~~~~ilR~~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  186 (314)
                      |....|..+|...+.+.+     .+++++..|.||.|-.+....    ...+.....+....  +       ...+...+
T Consensus       164 ~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~--~-------~~r~~~p~  234 (259)
T d1oaaa_         164 KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLK--S-------DGALVDCG  234 (259)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHH--H-------TTCSBCHH
T ss_pred             ccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcC--C-------CCCCCCHH
Confidence            222368889988777653     468999999999876641000    00000111111000  0       11356789


Q ss_pred             HHHHHHHHHhcCCc-cCCceEEe
Q 021331          187 DLARAFVQVLGNEK-ASRQVFNI  208 (314)
Q Consensus       187 D~a~~~~~~l~~~~-~~~~~~~i  208 (314)
                      |+|++++.+++.+. ..|+.+++
T Consensus       235 evA~~i~~ll~~~s~~TG~~idv  257 (259)
T d1oaaa_         235 TSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHHHHHHHCCSCTTEEEET
T ss_pred             HHHHHHHHHhhhccCCCCCeEEe
Confidence            99999999887543 25555554

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1.6e-11  Score=99.69  Aligned_cols=188  Identities=16%  Similarity=0.190  Sum_probs=119.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-----CCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-----~~~d~   75 (314)
                      |||++.||.++++.|+++|++|++++|+.+.....        ..+.........+|+.+.+.+++....     ...|.
T Consensus        11 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (248)
T d2o23a1          11 TGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQ--------AKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   82 (248)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHH--------HHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH--------HHHhCCCcccccccccccccccccccccccccccccc
Confidence            79999999999999999999999999988664321        122346788889999987666555432     25788


Q ss_pred             EEEcCCCCcc--------------------------c----HHHHHHhCC--------CCCcEEEEeeceeeccCCCCCc
Q 021331           76 VYDINGREAD--------------------------E----VEPILDALP--------NLEQFIYCSSAGVYLKSDLLPH  117 (314)
Q Consensus        76 vi~~a~~~~~--------------------------~----~~~~~~~~~--------~~~~~i~~Ss~~v~~~~~~~~~  117 (314)
                      +++.++.+..                          +    ++.++..+.        +..++|++||...+...   |.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~---~~  159 (248)
T d2o23a1          83 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ---VG  159 (248)
T ss_dssp             EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC---TT
T ss_pred             cccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC---CC
Confidence            8877654211                          0    122222221        22479999997665322   22


Q ss_pred             cCccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHH
Q 021331          118 CESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  190 (314)
Q Consensus       118 ~e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  190 (314)
                      ...|..+|...+.+.+       .+|+++..|.||.+..+... .+............+  +.      ..+...+|+|+
T Consensus       160 ~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~-~~~~~~~~~~~~~~p--l~------~R~g~peevA~  230 (248)
T d2o23a1         160 QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLT-SLPEKVCNFLASQVP--FP------SRLGDPAEYAH  230 (248)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTCS--SS------CSCBCHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhh-cCCHHHHHHHHhcCC--CC------CCCcCHHHHHH
Confidence            2368999988877764       46899999999998765311 111111222222211  11      12567899999


Q ss_pred             HHHHHhcCCccCCceEEe
Q 021331          191 AFVQVLGNEKASRQVFNI  208 (314)
Q Consensus       191 ~~~~~l~~~~~~~~~~~i  208 (314)
                      +++.+++.+.-.|++++|
T Consensus       231 ~v~fL~s~~~itGq~I~v  248 (248)
T d2o23a1         231 LVQAIIENPFLNGEVIRL  248 (248)
T ss_dssp             HHHHHHHCTTCCSCEEEE
T ss_pred             HHHHHHhCCCCCceEeEC
Confidence            999998765446666654

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.24  E-value=2.7e-11  Score=99.86  Aligned_cols=195  Identities=12%  Similarity=0.069  Sum_probs=123.9

Q ss_pred             CCccc--ccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc----C-Cc
Q 021331            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K-GF   73 (314)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~----~-~~   73 (314)
                      |||+|  .||.++++.|+++|++|++++|+..... .     .+++........++.+|+++.+++.+++..    . .+
T Consensus        11 TGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~-~-----~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~i   84 (274)
T d2pd4a1          11 VGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEK-R-----VRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSL   84 (274)
T ss_dssp             ECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHH-H-----HHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred             ECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-H-----HHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCCC
Confidence            68877  7999999999999999999999854211 1     123333456778889999998877776642    1 69


Q ss_pred             cEEEEcCCCCccc------------------------HHHHHHh-CC---CCCcEEEEeeceeeccCCCCCccCccccch
Q 021331           74 DVVYDINGREADE------------------------VEPILDA-LP---NLEQFIYCSSAGVYLKSDLLPHCESRHKGK  125 (314)
Q Consensus        74 d~vi~~a~~~~~~------------------------~~~~~~~-~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k  125 (314)
                      |++||+++.....                        ....... ..   ....++.+|+.+.....   +....|+.+|
T Consensus        85 d~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~---~~~~~y~asK  161 (274)
T d2pd4a1          85 DFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM---AHYNVMGLAK  161 (274)
T ss_dssp             EEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC---TTCHHHHHHH
T ss_pred             CeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccc---ccchhhhHHH
Confidence            9999999864211                        1111111 11   22234455554433222   2222578888


Q ss_pred             hhHHHHHH-------hcCCceEEEecCeeeCCCCCCchh-HHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhc
Q 021331          126 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  197 (314)
Q Consensus       126 ~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~  197 (314)
                      ...+.+.+       .+|+++..+.||.+..+......- ...........++         ..+...+|+|.+++.+++
T Consensus       162 ~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedIA~~v~fL~S  232 (274)
T d2pd4a1         162 AALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL---------RKNVSLEEVGNAGMYLLS  232 (274)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhc---------cCCcCHHHHHHHHHHHhC
Confidence            87777654       368999999999987764221111 1222222222221         235679999999999998


Q ss_pred             CCc--cCCceEEecCCcc
Q 021331          198 NEK--ASRQVFNISGEKY  213 (314)
Q Consensus       198 ~~~--~~~~~~~i~~~~~  213 (314)
                      +..  ..|.++.+.+|..
T Consensus       233 ~~s~~itG~~i~vDGG~~  250 (274)
T d2pd4a1         233 SLSSGVSGEVHFVDAGYH  250 (274)
T ss_dssp             GGGTTCCSCEEEESTTGG
T ss_pred             hhhCCCcCceEEECCChh
Confidence            633  3789999999974

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.24  E-value=4.1e-11  Score=97.17  Aligned_cols=144  Identities=17%  Similarity=0.206  Sum_probs=97.7

Q ss_pred             CCcccccHHHHHHHHHH---CCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-------
Q 021331            1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------   70 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-------   70 (314)
                      |||++.||.++++.|++   +|++|++.+|+.+.... +     +.+.....++.++.+|++|+++++++++.       
T Consensus         8 TGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~-~-----~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           8 TGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-L-----EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH-H-----HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             eCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHH-H-----HHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            89999999999999974   68999999999876421 1     12222346899999999999888877652       


Q ss_pred             CCccEEEEcCCCCcc---------------------c----HHHHHHhCC-------------CCCcEEEEeeceeeccC
Q 021331           71 KGFDVVYDINGREAD---------------------E----VEPILDALP-------------NLEQFIYCSSAGVYLKS  112 (314)
Q Consensus        71 ~~~d~vi~~a~~~~~---------------------~----~~~~~~~~~-------------~~~~~i~~Ss~~v~~~~  112 (314)
                      -++|++||+||....                     +    ++.++..+.             +..++|.+||....-..
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~  161 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG  161 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCC
Confidence            258999999986211                     1    122222221             24578999985432111


Q ss_pred             CCCCccCccccchhhHHHHH-------HhcCCceEEEecCeeeCC
Q 021331          113 DLLPHCESRHKGKLNTESVL-------ESKGVNWTSLRPVYIYGP  150 (314)
Q Consensus       113 ~~~~~~e~~~~~k~~~e~~~-------~~~~~~~~ilR~~~v~g~  150 (314)
                      ...+-...|..+|.....+.       ...++.+..+.||.|-.+
T Consensus       162 ~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~  206 (248)
T d1snya_         162 NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD  206 (248)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence            11222226889998776664       346899999999987655

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.23  E-value=3.2e-11  Score=97.06  Aligned_cols=172  Identities=13%  Similarity=0.087  Sum_probs=111.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHH-------hhhcCCc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS-------SLSAKGF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~-------~~~~~~~   73 (314)
                      |||+|.||.++++.|+++|++|++++++.....               .....+.+|..+.+..+.       .+...++
T Consensus         8 TGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   72 (236)
T d1dhra_           8 YGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   72 (236)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------------cccceeecccCcHHHHHHHHHHHHHHhCCCCc
Confidence            799999999999999999999999998765421               223344455554433332       2222358


Q ss_pred             cEEEEcCCCCccc-------------------------HHHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           74 DVVYDINGREADE-------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        74 d~vi~~a~~~~~~-------------------------~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      |++||+||.....                         ++.++..+++..++|++||......   .|....|+.+|...
T Consensus        73 D~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~---~~~~~~Y~asKaal  149 (236)
T d1dhra_          73 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG---TPGMIGYGMAKGAV  149 (236)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC---CTTBHHHHHHHHHH
T ss_pred             eEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCC---ccCCcccHHHHHHH
Confidence            9999999852110                         2233333444468999999765432   22223699999888


Q ss_pred             HHHHHh---------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          129 ESVLES---------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       129 e~~~~~---------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      +.+.+.         .++++..+.||.+..|     +    .+......         ..-.++..+++|+.+..++...
T Consensus       150 ~~lt~~la~El~~~~~gI~vn~v~PG~v~T~-----~----~~~~~~~~---------~~~~~~~pe~va~~~~~l~s~~  211 (236)
T d1dhra_         150 HQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP-----M----NRKSMPEA---------DFSSWTPLEFLVETFHDWITGN  211 (236)
T ss_dssp             HHHHHHHTSTTSSCCTTCEEEEEEESCEECH-----H----HHHHSTTS---------CGGGSEEHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHhccCCCcEEEEEEEeccCcCC-----c----chhhCccc---------hhhcCCCHHHHHHHHHHHhCCC
Confidence            887642         4689999999988765     1    11111111         1124677899999999998763


Q ss_pred             c--cCCceEEe
Q 021331          200 K--ASRQVFNI  208 (314)
Q Consensus       200 ~--~~~~~~~i  208 (314)
                      .  ..|.++.+
T Consensus       212 ~~~i~G~~i~v  222 (236)
T d1dhra_         212 KRPNSGSLIQV  222 (236)
T ss_dssp             TCCCTTCEEEE
T ss_pred             ccCCCCCeEEE
Confidence            2  35666655

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.22  E-value=5.8e-11  Score=97.31  Aligned_cols=197  Identities=16%  Similarity=0.169  Sum_probs=119.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecCCCh----hhHHHhhh----c-
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDY----DFVKSSLS----A-   70 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~----~~l~~~~~----~-   70 (314)
                      |||++.||.++++.|+++|++|++++|+.++....+.    +++... ......+..|..+.    +.+.++++    + 
T Consensus         7 TGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           7 TGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLV----AELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHH----HHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            8999999999999999999999999999765322111    111111 34566667666542    33333322    1 


Q ss_pred             CCccEEEEcCCCCccc-----------------------------------HHHHHHhCC-------CCCcEEEEeecee
Q 021331           71 KGFDVVYDINGREADE-----------------------------------VEPILDALP-------NLEQFIYCSSAGV  108 (314)
Q Consensus        71 ~~~d~vi~~a~~~~~~-----------------------------------~~~~~~~~~-------~~~~~i~~Ss~~v  108 (314)
                      -++|++||+||.....                                   .......+.       ....++.+|+...
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  162 (266)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence            1699999999863210                                   000111111       1223445555433


Q ss_pred             eccCCCCCccCccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceee
Q 021331          109 YLKSDLLPHCESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQ  181 (314)
Q Consensus       109 ~~~~~~~~~~e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (314)
                      ..   ..|....|..+|...+.+.+       .+|+++..|.||.+..+...   .......+...-+  + +     +.
T Consensus       163 ~~---~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~---~~~~~~~~~~~~p--l-~-----r~  228 (266)
T d1mxha_         163 DL---PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM---PQETQEEYRRKVP--L-G-----QS  228 (266)
T ss_dssp             GS---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS---CHHHHHHHHTTCT--T-T-----SC
T ss_pred             cc---cCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC---CHHHHHHHHhcCC--C-C-----CC
Confidence            22   22233368888988777653       46899999999998766322   2233333433322  1 1     12


Q ss_pred             eeeHHHHHHHHHHHhcCCc--cCCceEEecCCcccc
Q 021331          182 LGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       182 ~i~~~D~a~~~~~~l~~~~--~~~~~~~i~~~~~~s  215 (314)
                      +...+|+|.+++.++++..  ..|.++.+.||..++
T Consensus       229 ~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l~  264 (266)
T d1mxha_         229 EASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILA  264 (266)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCHHHHHHHHHHHhCchhCCccCCeEEECccHhhh
Confidence            4568999999999998633  378899999987553

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.21  E-value=2.8e-11  Score=97.38  Aligned_cols=173  Identities=14%  Similarity=0.146  Sum_probs=109.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHH-------HhhhcCCc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK-------SSLSAKGF   73 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~-------~~~~~~~~   73 (314)
                      |||+|.||.++++.|+++|++|++++|+.....               .....+.+|..+.+...       ..++.-++
T Consensus         8 TGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i   72 (235)
T d1ooea_           8 YGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV   72 (235)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc---------------cccceeccccCchhHHHHHHHHHHHHhcCCCe
Confidence            799999999999999999999999999875421               22334445555433222       22221358


Q ss_pred             cEEEEcCCCCccc-------------------------HHHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccchhhH
Q 021331           74 DVVYDINGREADE-------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNT  128 (314)
Q Consensus        74 d~vi~~a~~~~~~-------------------------~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~  128 (314)
                      |++||+||....+                         .+.++..+++..++|++||...+...   |....|..+|...
T Consensus        73 D~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~---~~~~~Y~asKaal  149 (235)
T d1ooea_          73 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT---PSMIGYGMAKAAV  149 (235)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC---TTBHHHHHHHHHH
T ss_pred             eEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCc---ccccchHHHHHHH
Confidence            9999999863211                         12233334444689999997654322   2223699999988


Q ss_pred             HHHHHh---------cCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          129 ESVLES---------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       129 e~~~~~---------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      +.+.+.         .++.+..+.|+.+-.+     +    .+......         ....++..+|+++.++..+..+
T Consensus       150 ~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~-----~----~~~~~~~~---------~~~~~~~~~~va~~~~~~l~~~  211 (235)
T d1ooea_         150 HHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP-----M----NRKWMPNA---------DHSSWTPLSFISEHLLKWTTET  211 (235)
T ss_dssp             HHHHHHHHSTTSSCCTTCEEEEEEESCBCCH-----H----HHHHSTTC---------CGGGCBCHHHHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHhccCCCceEEEEEecCcCcCc-----c----hhhhCcCC---------ccccCCCHHHHHHHHHHHhcCc
Confidence            887642         3567788889876443     2    22222111         1124678999999998766553


Q ss_pred             c---cCCceEEec
Q 021331          200 K---ASRQVFNIS  209 (314)
Q Consensus       200 ~---~~~~~~~i~  209 (314)
                      .   ..|..+.+.
T Consensus       212 ~~~~~tG~~i~v~  224 (235)
T d1ooea_         212 SSRPSSGALLKIT  224 (235)
T ss_dssp             GGCCCTTCEEEEE
T ss_pred             cccCCCceEEEEE
Confidence            2   256666663

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.19  E-value=4.1e-11  Score=99.24  Aligned_cols=197  Identities=12%  Similarity=0.051  Sum_probs=119.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhh------------------ccCceEEEEecCCChh
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE------------------FSSKILHLKGDRKDYD   62 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~D~~d~~   62 (314)
                      |||++.||.++++.|+++|++|++.+++.......+.    +.+..                  ....+....+|+++++
T Consensus         8 TGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~   83 (284)
T d1e7wa_           8 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS----ATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT   83 (284)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHH----HHHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence            8999999999999999999999998877543211110    00000                  0122334456688888


Q ss_pred             hHHHhhhcC-----CccEEEEcCCCCccc-----------------------HH-----H------HHHh----------
Q 021331           63 FVKSSLSAK-----GFDVVYDINGREADE-----------------------VE-----P------ILDA----------   93 (314)
Q Consensus        63 ~l~~~~~~~-----~~d~vi~~a~~~~~~-----------------------~~-----~------~~~~----------   93 (314)
                      +++++++..     ++|++||+||.....                       ..     |      +.+.          
T Consensus        84 ~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  163 (284)
T d1e7wa_          84 RCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPA  163 (284)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCG
T ss_pred             HHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHH
Confidence            777766432     699999999874210                       00     0      0110          


Q ss_pred             CC--CCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhHHHHHHH
Q 021331           94 LP--NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL  164 (314)
Q Consensus        94 ~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~  164 (314)
                      +.  +..++|.+++......   .+-...|..+|...+.+.+       .+|+++..|.||.+-..   ........+..
T Consensus       164 ~~~~~~~~ii~~~s~~~~~~---~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~---~~~~~~~~~~~  237 (284)
T d1e7wa_         164 KHRGTNYSIINMVDAMTNQP---LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV---DDMPPAVWEGH  237 (284)
T ss_dssp             GGSCSCEEEEEECCTTTTSC---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCG---GGSCHHHHHHH
T ss_pred             HhcCCCCcccccccccccCC---ccceeeeccccccchhhhHHHHHHhCCcccccccccccccccc---ccCCHHHHHHH
Confidence            11  2235666666443221   1222268888988777653       46899999999864222   12233344444


Q ss_pred             HcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCCc--cCCceEEecCCcccc
Q 021331          165 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~~~~~~i~~~~~~s  215 (314)
                      ....++  .+      .+...+|+|++++.++....  -.|.++.+.||..++
T Consensus       238 ~~~~pl--~~------R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         238 RSKVPL--YQ------RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             HTTCTT--TT------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HhcCCC--CC------CCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            433321  11      25678999999999997533  378999999998765

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.19  E-value=1.1e-10  Score=94.77  Aligned_cols=181  Identities=14%  Similarity=0.084  Sum_probs=109.8

Q ss_pred             CCcccccHHHHHHHHHHCCC--eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-------C
Q 021331            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K   71 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-------~   71 (314)
                      |||++.||.+++++|+++|+  .|++.+|+.++......        ....++.++.+|++|.++++++++.       .
T Consensus         9 TGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~--------~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           9 TGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS--------IKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             SSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT--------CCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             eCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH--------hhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence            89999999999999999995  68888888765332111        1136799999999999888776643       2


Q ss_pred             CccEEEEcCCCCcc---------------------c----HHHHHHhCC-------------CCCcEEEEeeceeeccCC
Q 021331           72 GFDVVYDINGREAD---------------------E----VEPILDALP-------------NLEQFIYCSSAGVYLKSD  113 (314)
Q Consensus        72 ~~d~vi~~a~~~~~---------------------~----~~~~~~~~~-------------~~~~~i~~Ss~~v~~~~~  113 (314)
                      ++|++||+||....                     +    ++.++..++             ...+++.+|+...+-...
T Consensus        81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~  160 (250)
T d1yo6a1          81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC
Confidence            48999999996311                     1    122222221             124567777644332111


Q ss_pred             --CCCcc--CccccchhhHHHHH-------HhcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeee
Q 021331          114 --LLPHC--ESRHKGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQL  182 (314)
Q Consensus       114 --~~~~~--e~~~~~k~~~e~~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (314)
                        ..+..  ..|..+|.....+.       ...|+.+..+.||.|-.+     +    ..     .           ...
T Consensus       161 ~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~-----m----~~-----~-----------~~~  215 (250)
T d1yo6a1         161 TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTN-----L----GG-----K-----------NAA  215 (250)
T ss_dssp             CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------------------------
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCC-----C----CC-----C-----------CCC
Confidence              11111  15899998776664       356899999999976443     1    00     0           123


Q ss_pred             eeHHHHHHHHHHHhcCCc--cCCceEEecCCcccc
Q 021331          183 GHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  215 (314)
Q Consensus       183 i~~~D~a~~~~~~l~~~~--~~~~~~~i~~~~~~s  215 (314)
                      ++.++.++.++..+....  ..|..|+ .++.++.
T Consensus       216 ~~~e~~a~~~~~~~~~~~~~~sG~f~~-~~g~p~~  249 (250)
T d1yo6a1         216 LTVEQSTAELISSFNKLDNSHNGRFFM-RNLKPYE  249 (250)
T ss_dssp             ---HHHHHHHHHHHTTCCGGGTTCEEE-TTEEECC
T ss_pred             CCHHHHHHHHHHHHhcCCCCCCeEEEC-CCCeeCC
Confidence            457888888888887532  3455554 3455543

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=2.2e-11  Score=100.33  Aligned_cols=103  Identities=18%  Similarity=0.168  Sum_probs=75.9

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----Ccc
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d   74 (314)
                      |||++.||.++++.|+++ |++|++.+|+.+......     +.+.....++.++.+|++|.++++++++..     ++|
T Consensus         9 TGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           9 TGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAV-----QQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             SSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHH-----HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             CCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            899999999999999986 899999999987643211     123333567899999999999888776532     699


Q ss_pred             EEEEcCCCCcc--------------------c----HHHHHHhCCCCCcEEEEeecee
Q 021331           75 VVYDINGREAD--------------------E----VEPILDALPNLEQFIYCSSAGV  108 (314)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~~~~~~~~~~~~i~~Ss~~v  108 (314)
                      ++||+||....                    +    ++.++..++...++|++||...
T Consensus        84 iLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~  141 (275)
T d1wmaa1          84 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMS  141 (275)
T ss_dssp             EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH
T ss_pred             EEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccce
Confidence            99999997421                    1    3334444554468999999543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.08  E-value=3.3e-10  Score=92.84  Aligned_cols=196  Identities=16%  Similarity=0.116  Sum_probs=118.2

Q ss_pred             CCccc--ccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhc-------C
Q 021331            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K   71 (314)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~-------~   71 (314)
                      |||+|  .||.++++.|+++|++|++++|+..+....+.+       ....+...+.+|+.++++...+++.       .
T Consensus        12 tGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~-------~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~   84 (268)
T d2h7ma1          12 SGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD-------RLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   84 (268)
T ss_dssp             CCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT-------TSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             ECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH-------HcCCceeeEeeecccccccccccchhhhccccC
Confidence            78654  599999999999999999999987653221111       1135678899999998766555432       1


Q ss_pred             -CccEEEEcCCCCccc-------------------------HHHHHHhCC---CCCcEEEEeeceeeccCCCCCccCccc
Q 021331           72 -GFDVVYDINGREADE-------------------------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCESRH  122 (314)
Q Consensus        72 -~~d~vi~~a~~~~~~-------------------------~~~~~~~~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (314)
                       .+|+++|+++.....                         .........   .....+.++|.....   ..|....|+
T Consensus        85 ~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~---~~p~~~~y~  161 (268)
T d2h7ma1          85 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR---AMPAYNWMT  161 (268)
T ss_dssp             CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS---CCTTTHHHH
T ss_pred             CCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccc---cCcccchhh
Confidence             479999999853110                         001111111   222344444433322   223333688


Q ss_pred             cchhhHHHHHH-------hcCCceEEEecCeeeCCC-------CCCc----hhHHHHHHHHcCCCeecCCCCCceeeeee
Q 021331          123 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL-------NYNP----VEEWFFHRLKAGRPIPIPGSGIQVTQLGH  184 (314)
Q Consensus       123 ~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~-------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  184 (314)
                      .+|...+.+.+       .+++++..|.||.|-.+.       ....    ....+.+.....-++   +     +.+..
T Consensus       162 ~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl---~-----rr~~~  233 (268)
T d2h7ma1         162 VAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI---G-----WNMKD  233 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT---C-----CCTTC
T ss_pred             ccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCC---C-----CCCCC
Confidence            88888877764       367999999999876531       0000    011111222211211   0     23455


Q ss_pred             HHHHHHHHHHHhcCC--ccCCceEEecCCccc
Q 021331          185 VKDLARAFVQVLGNE--KASRQVFNISGEKYV  214 (314)
Q Consensus       185 ~~D~a~~~~~~l~~~--~~~~~~~~i~~~~~~  214 (314)
                      ++|+|++++.++.+.  .-.|.++.|.||...
T Consensus       234 p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~  265 (268)
T d2h7ma1         234 ATPVAKTVCALLSDWLPATTGDIIYADGGAHT  265 (268)
T ss_dssp             CHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             HHHHHHHHHHHhCchhcCccCCEEEECcCccc
Confidence            899999999999752  237889999998743

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=2e-10  Score=94.15  Aligned_cols=174  Identities=15%  Similarity=0.117  Sum_probs=112.4

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcC-----CccE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~-----~~d~   75 (314)
                      ||||+.||.++++.|+++|++|++++|+.+.......    +........+..+.+|..+.+.........     .+|+
T Consensus        20 TGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~   95 (269)
T d1xu9a_          20 TGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVS----HCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDM   95 (269)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCccc
Confidence            8999999999999999999999999998765432111    011112356788889999887666555422     6899


Q ss_pred             EEEcCCCCccc------------------------HHHHHHhCC-CCCcEEEEeeceeeccCCCCCccCccccchhhHHH
Q 021331           76 VYDINGREADE------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTES  130 (314)
Q Consensus        76 vi~~a~~~~~~------------------------~~~~~~~~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~  130 (314)
                      ++++++.....                        ++.++..++ +..++|++||...+-.   .|....|+.+|...+.
T Consensus        96 li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~---~p~~~~Y~asKaal~~  172 (269)
T d1xu9a_          96 LILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA---YPMVAAYSASKFALDG  172 (269)
T ss_dssp             EEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC---CTTCHHHHHHHHHHHH
T ss_pred             cccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCC---CCCchHHHHHHHHHHH
Confidence            99998863211                        233444444 4468999999664322   2333368999988776


Q ss_pred             HHH---------hcCCceEEEecCeeeCCCCCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 021331          131 VLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  199 (314)
Q Consensus       131 ~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~  199 (314)
                      +.+         ..++.+..+.||.|-.+     +    ......+.         ........+++|+.++..+...
T Consensus       173 ~~~~La~El~~~~~~I~V~~v~PG~v~T~-----~----~~~~~~~~---------~~~~~~~~e~~a~~i~~~~~~~  232 (269)
T d1xu9a_         173 FFSSIRKEYSVSRVNVSITLCVLGLIDTE-----T----AMKAVSGI---------VHMQAAPKEECALEIIKGGALR  232 (269)
T ss_dssp             HHHHHHHHHHHHTCCCEEEEEEECCBCCH-----H----HHHHSCGG---------GGGGCBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhhhcCCCEEEEEEecCcCCCc-----H----HHHhccCC---------ccccCCCHHHHHHHHHHHhhcC
Confidence            653         23588889999876543     1    12221111         1123455789998888776653

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.97  E-value=2.7e-09  Score=86.60  Aligned_cols=182  Identities=15%  Similarity=0.124  Sum_probs=101.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhh----c--CCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----A--KGFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~----~--~~~d   74 (314)
                      |||++.||.++++.|+++|++|++++|+..+.                      ..|+.+.+.......    +  ..+|
T Consensus         7 TGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~----------------------~~d~~~~~~~~~~~~~~~~~~~~~id   64 (257)
T d1fjha_           7 SGCATGIGAATRKVLEAAGHQIVGIDIRDAEV----------------------IADLSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE----------------------ECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECChHHH----------------------HHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence            79999999999999999999999999876542                      235555544333321    1  1589


Q ss_pred             EEEEcCCCCccc-------------HHHH----HHhCC--CCCcEEEEeeceeec-------------------------
Q 021331           75 VVYDINGREADE-------------VEPI----LDALP--NLEQFIYCSSAGVYL-------------------------  110 (314)
Q Consensus        75 ~vi~~a~~~~~~-------------~~~~----~~~~~--~~~~~i~~Ss~~v~~-------------------------  110 (314)
                      +++++|+.....             ...+    .+...  .......+++.....                         
T Consensus        65 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~  144 (257)
T d1fjha_          65 GLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVE  144 (257)
T ss_dssp             EEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHH
T ss_pred             EEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehh
Confidence            999999864211             1111    11111  222333333321110                         


Q ss_pred             cCCCCCccCccccchhhHHHHHH-------hcCCceEEEecCeeeCCCCCCchhH-HHHHHHHcCCCeecCCCCCceeee
Q 021331          111 KSDLLPHCESRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFHRLKAGRPIPIPGSGIQVTQL  182 (314)
Q Consensus       111 ~~~~~~~~e~~~~~k~~~e~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  182 (314)
                      .....+....|..+|...+.+.+       .+|+++..|.||.+-.|.....+-. ...+..... .       .....+
T Consensus       145 ~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~-~-------~PlgR~  216 (257)
T d1fjha_         145 HAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKF-V-------PPMGRR  216 (257)
T ss_dssp             TCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------C-C-------CSTTSC
T ss_pred             ccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhc-C-------CCCCCC
Confidence            00011111158888988877764       4689999999999876532111100 001111110 0       111236


Q ss_pred             eeHHHHHHHHHHHhcCCc--cCCceEEecCCc
Q 021331          183 GHVKDLARAFVQVLGNEK--ASRQVFNISGEK  212 (314)
Q Consensus       183 i~~~D~a~~~~~~l~~~~--~~~~~~~i~~~~  212 (314)
                      ...+|+|.+++.+++...  -.|+++.+.||.
T Consensus       217 g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~  248 (257)
T d1fjha_         217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             CCTHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             cCHHHHHHHHHHHhCchhCCccCceEEeCCCc
Confidence            678999999999997532  378899998884

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.82  E-value=3.2e-08  Score=83.16  Aligned_cols=201  Identities=8%  Similarity=-0.003  Sum_probs=111.0

Q ss_pred             CC--cccccHHHHHHHHHHCCCeEEEEEcCCcccc-------cCCCCCCchhhhhccCceEEEE----------------
Q 021331            1 MG--GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-------QQLPGESDQEFAEFSSKILHLK----------------   55 (314)
Q Consensus         1 tG--atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~----------------   55 (314)
                      ||  ++..||.++++.|.++|.+|++..++.....       ......................                
T Consensus         8 TGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (329)
T d1uh5a_           8 AGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDIDEETK   87 (329)
T ss_dssp             ECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGCCHHHH
T ss_pred             eCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcccchhhh
Confidence            67  5579999999999999999999876543210       0000000000000001112222                


Q ss_pred             ----ecCCChhhHHHhhhc----C-CccEEEEcCCCCcc----------------------c----HHHHHHhCCCCCcE
Q 021331           56 ----GDRKDYDFVKSSLSA----K-GFDVVYDINGREAD----------------------E----VEPILDALPNLEQF  100 (314)
Q Consensus        56 ----~D~~d~~~l~~~~~~----~-~~d~vi~~a~~~~~----------------------~----~~~~~~~~~~~~~~  100 (314)
                          +|+.+.+.++.+++.    + ++|++||++|....                      +    ++.++..++...++
T Consensus        88 ~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsI  167 (329)
T d1uh5a_          88 NNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSI  167 (329)
T ss_dssp             TSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEE
T ss_pred             hhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhccccccc
Confidence                245555444444332    1 79999999875211                      0    12222223344578


Q ss_pred             EEEeeceeeccCCCCC-ccCccccchhhHHHHHH--------hcCCceEEEecCeeeCCC--------------------
Q 021331          101 IYCSSAGVYLKSDLLP-HCESRHKGKLNTESVLE--------SKGVNWTSLRPVYIYGPL--------------------  151 (314)
Q Consensus       101 i~~Ss~~v~~~~~~~~-~~e~~~~~k~~~e~~~~--------~~~~~~~ilR~~~v~g~~--------------------  151 (314)
                      |.+||.+....   .| +...|+.+|...+.+.+        ++|+++..|.||.|-.+.                    
T Consensus       168 v~iss~~~~~~---~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~~~~~~~  244 (329)
T d1uh5a_         168 ISLTYHASQKV---VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKN  244 (329)
T ss_dssp             EEEECGGGTSC---CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC---------------
T ss_pred             ccceeehhccc---ccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhhhhhhhhc
Confidence            88887654322   22 22247788877776653        368999999999774310                    


Q ss_pred             ------------------------CCCchhHHHHHHHHcCCCeecCCCCCceeeeeeHHHHHHHHHHHhcCC--ccCCce
Q 021331          152 ------------------------NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQV  205 (314)
Q Consensus       152 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~--~~~~~~  205 (314)
                                              .................|         ...+...+|+|.+++.++++.  ...|++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P---------l~R~~~pedvA~~v~fLaSd~s~~iTGq~  315 (329)
T d1uh5a_         245 RNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAP---------LRQKLLSTDIGSVASFLLSRESRAITGQT  315 (329)
T ss_dssp             ---------------------------CHHHHHHHHHHHHSS---------SCSCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             cccccccccccccccccchhhhhhhcccchHHHHHHHhccCC---------CCCCcCHHHHHHHHHHHhCchhCCccCCe
Confidence                                    000011111111111111         123567899999999999763  237899


Q ss_pred             EEecCCcc
Q 021331          206 FNISGEKY  213 (314)
Q Consensus       206 ~~i~~~~~  213 (314)
                      +.+.||..
T Consensus       316 i~VDGG~~  323 (329)
T d1uh5a_         316 IYVDNGLN  323 (329)
T ss_dssp             EEESTTGG
T ss_pred             EEECCCcc
Confidence            99998853

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.81  E-value=7.9e-08  Score=79.48  Aligned_cols=202  Identities=8%  Similarity=-0.046  Sum_probs=108.9

Q ss_pred             CCccc--ccHHHHHHHHHHCCCeEEEEEcCCcccc-----cCCCCCCchhhhh-ccCc-eEEEEecC-------------
Q 021331            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIA-----QQLPGESDQEFAE-FSSK-ILHLKGDR-------------   58 (314)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~-~~~~-~~~~~~D~-------------   58 (314)
                      |||+|  .||.++++.|+++|++|++.+|++....     ............+ .... -....+|.             
T Consensus        14 TGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~   93 (297)
T d1d7oa_          14 AGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDVPEDVK   93 (297)
T ss_dssp             ECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGSCHHHH
T ss_pred             ECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccccccchhhhh
Confidence            68877  8999999999999999999988642100     0000000000000 0011 11222221             


Q ss_pred             -------CChhhHHHhhh----cC-CccEEEEcCCCCcc-----------c---------------HHHHHHhCCCCCcE
Q 021331           59 -------KDYDFVKSSLS----AK-GFDVVYDINGREAD-----------E---------------VEPILDALPNLEQF  100 (314)
Q Consensus        59 -------~d~~~l~~~~~----~~-~~d~vi~~a~~~~~-----------~---------------~~~~~~~~~~~~~~  100 (314)
                             .+....+++++    .+ ++|++||+||....           .               ++.++..+....+.
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~g~~  173 (297)
T d1d7oa_          94 ANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGAS  173 (297)
T ss_dssp             TSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEE
T ss_pred             hhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhcCCcc
Confidence                   12222222222    11 79999999886210           0               11111112222344


Q ss_pred             EEEeeceeeccCCCCCccCccccchhhHHHHH--------HhcCCceEEEecCeeeCCCCCC-chhHHHHHHHHcCCCee
Q 021331          101 IYCSSAGVYLKSDLLPHCESRHKGKLNTESVL--------ESKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIP  171 (314)
Q Consensus       101 i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~--------~~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~  171 (314)
                      +.+++.+.....  .+....|..+|...+.+.        ..+++++..|.||.+..+.... .....+.+.....-++ 
T Consensus       174 ~~~~~~~~~~~~--~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl-  250 (297)
T d1d7oa_         174 ISLTYIASERII--PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPI-  250 (297)
T ss_dssp             EEEECGGGTSCC--TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSS-
T ss_pred             eeeeehhhcccc--cccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHHHHHHhCCCC-
Confidence            555554332111  122225777776655543        2468999999999998875432 2233344444333322 


Q ss_pred             cCCCCCceeeeeeHHHHHHHHHHHhcCCc--cCCceEEecCCcc
Q 021331          172 IPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKY  213 (314)
Q Consensus       172 ~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~~~~~~i~~~~~  213 (314)
                              ..+...+|+|.+++.++....  -.|+++.+.||..
T Consensus       251 --------gR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s  286 (297)
T d1d7oa_         251 --------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             --------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             --------CCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHh
Confidence                    135679999999999997532  3788999998853

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.55  E-value=5.2e-09  Score=80.89  Aligned_cols=75  Identities=19%  Similarity=0.183  Sum_probs=60.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |||+|.+|..+++.|+++|++|++++|+.++......     .+. ...++.+..+|+.|.+.+++++.  ++|+|||++
T Consensus        29 tGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~d~~~~~~~~~~~~--~iDilin~A  100 (191)
T d1luaa1          29 LAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAAD-----SVN-KRFKVNVTAAETADDASRAEAVK--GAHFVFTAG  100 (191)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----HHH-HHHTCCCEEEECCSHHHHHHHTT--TCSEEEECC
T ss_pred             ECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHH-----HHH-hccchhhhhhhcccHHHHHHHhc--CcCeeeecC
Confidence            7999999999999999999999999999766321111     111 12456678899999999999998  999999999


Q ss_pred             CCC
Q 021331           81 GRE   83 (314)
Q Consensus        81 ~~~   83 (314)
                      |..
T Consensus       101 g~g  103 (191)
T d1luaa1         101 AIG  103 (191)
T ss_dssp             CTT
T ss_pred             ccc
Confidence            864

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.84  E-value=1.7e-05  Score=56.75  Aligned_cols=69  Identities=14%  Similarity=0.144  Sum_probs=55.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHh-hhcCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~-~~~~~~d~vi~~a~   81 (314)
                      |.|.+|+.+++.|.+.|++|++++.+++.......           .+...+.+|.++++.+.++ +.  ++|.+|-+.+
T Consensus         7 G~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~-----------~~~~~~~gd~~~~~~l~~a~i~--~a~~vi~~~~   73 (134)
T d2hmva1           7 GLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-----------YATHAVIANATEENELLSLGIR--NFEYVIVAIG   73 (134)
T ss_dssp             CCSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT-----------TCSEEEECCTTCTTHHHHHTGG--GCSEEEECCC
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH-----------hCCcceeeecccchhhhccCCc--cccEEEEEcC
Confidence            45999999999999999999999998877543322           4567888999999999887 55  7898887766


Q ss_pred             CCc
Q 021331           82 REA   84 (314)
Q Consensus        82 ~~~   84 (314)
                      .+.
T Consensus        74 ~~~   76 (134)
T d2hmva1          74 ANI   76 (134)
T ss_dssp             SCH
T ss_pred             chH
Confidence            443

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.41  E-value=5.4e-05  Score=53.89  Aligned_cols=68  Identities=19%  Similarity=0.345  Sum_probs=53.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHh-hhcCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~-~~~~~~d~vi~~a~   81 (314)
                      |.|.+|..+++.|.+.|++|++++.+++......         + ..+..++.+|.+|++.+.++ ++  ++|.++-+..
T Consensus         7 G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~---------~-~~~~~vi~Gd~~~~~~l~~~~i~--~a~~vv~~t~   74 (132)
T d1lssa_           7 GIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKAS---------A-EIDALVINGDCTKIKTLEDAGIE--DADMYIAVTG   74 (132)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---------H-HCSSEEEESCTTSHHHHHHTTTT--TCSEEEECCS
T ss_pred             CCCHHHHHHHHHHHHCCCCcceecCChhhhhhhh---------h-hhhhhhccCcccchhhhhhcChh--hhhhhcccCC
Confidence            3499999999999999999999999887643111         1 12678899999999999887 34  7888887654


Q ss_pred             C
Q 021331           82 R   82 (314)
Q Consensus        82 ~   82 (314)
                      .
T Consensus        75 ~   75 (132)
T d1lssa_          75 K   75 (132)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.29  E-value=0.00019  Score=53.94  Aligned_cols=97  Identities=16%  Similarity=0.259  Sum_probs=64.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh---hhHHHhhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~l~~~~~~~~~d~vi   77 (314)
                      +||+|.+|..+++.+...|.+|+++++++++... +        ..  .+...+ .|..++   +.+.+.....++|+||
T Consensus        36 ~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~-~--------~~--~Ga~~v-i~~~~~~~~~~~~~~~~~~Gvd~v~  103 (182)
T d1v3va2          36 SAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY-L--------KQ--IGFDAA-FNYKTVNSLEEALKKASPDGYDCYF  103 (182)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-H--------HH--TTCSEE-EETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred             EeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHH-H--------Hh--hhhhhh-cccccccHHHHHHHHhhcCCCceeE
Confidence            5899999999999999999999999988765321 1        11  222222 234443   3344444445799999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEeeceeecc
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSSAGVYLK  111 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~~v~~~  111 (314)
                      ++.|.  ......++.++...+++.++....++.
T Consensus       104 D~vG~--~~~~~~~~~l~~~G~~v~~G~~~~~~~  135 (182)
T d1v3va2         104 DNVGG--EFLNTVLSQMKDFGKIAICGAISVYNR  135 (182)
T ss_dssp             ESSCH--HHHHHHGGGEEEEEEEEECCCGGGTTC
T ss_pred             EecCc--hhhhhhhhhccCCCeEEeecceeeccc
Confidence            99973  445667777775567787666555543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.22  E-value=0.00034  Score=47.77  Aligned_cols=64  Identities=13%  Similarity=-0.006  Sum_probs=51.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      |+|.+|+.++....+.|++|++++.++......+             .-.++.+|+.|.+.+.++....++|+|..-
T Consensus        18 GgGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v-------------a~~~i~~~~~d~~~l~~~~~~~~~DviT~E   81 (111)
T d1kjqa2          18 GSGELGKEVAIECQRLGVEVIAVDRYADAPAMHV-------------AHRSHVINMLDGDALRRVVELEKPHYIVPE   81 (111)
T ss_dssp             SCSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG-------------SSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             eCCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc-------------CCeEEECCCCCHHHHHHHHHhhCCceEEEE
Confidence            4699999999999999999999998876533222             235778999999999998865578998643

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.19  E-value=0.0004  Score=51.71  Aligned_cols=68  Identities=16%  Similarity=0.138  Sum_probs=50.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |+|.+|..+++.|.++||+|++++|+.+.......         ..........+..+.......+.  ..|.++.+..
T Consensus         9 GaG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~---------~~~~~~~~~~~~~~~~~~~~~i~--~~~~~i~~~~   76 (182)
T d1e5qa1           9 GSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA---------GVQHSTPISLDVNDDAALDAEVA--KHDLVISLIP   76 (182)
T ss_dssp             CCSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHT---------TCTTEEEEECCTTCHHHHHHHHT--TSSEEEECSC
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHh---------cccccccccccccchhhhHhhhh--ccceeEeecc
Confidence            45999999999999999999999999887432211         12445555566667777777777  7888886654

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.82  E-value=0.00048  Score=51.09  Aligned_cols=87  Identities=16%  Similarity=0.194  Sum_probs=55.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      +||+|.+|...++.+...|.+|+++++++++... .        .+  -+...+ .|..+..  .+.-...++|+||++.
T Consensus        34 ~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~-~--------~~--lGa~~~-i~~~~~~--~~~~~~~g~D~v~d~~   99 (171)
T d1iz0a2          34 QAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL-P--------LA--LGAEEA-ATYAEVP--ERAKAWGGLDLVLEVR   99 (171)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH-H--------HH--TTCSEE-EEGGGHH--HHHHHTTSEEEEEECS
T ss_pred             Eeccccchhhhhhhhccccccccccccccccccc-c--------cc--ccccee-eehhhhh--hhhhcccccccccccc
Confidence            5899999999999999999999999988765321 1        11  122222 2443322  2222233899999998


Q ss_pred             CCCcccHHHHHHhCCCCCcEEEEe
Q 021331           81 GREADEVEPILDALPNLEQFIYCS  104 (314)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~i~~S  104 (314)
                      |..   ....++.++...+++.++
T Consensus       100 G~~---~~~~~~~l~~~G~~v~~G  120 (171)
T d1iz0a2         100 GKE---VEESLGLLAHGGRLVYIG  120 (171)
T ss_dssp             CTT---HHHHHTTEEEEEEEEEC-
T ss_pred             chh---HHHHHHHHhcCCcEEEEe
Confidence            843   345566666445777654

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.66  E-value=0.0014  Score=46.94  Aligned_cols=31  Identities=19%  Similarity=0.357  Sum_probs=23.6

Q ss_pred             CCcccccHHHHHHHHHHCC----CeEEEEEcCCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAP   31 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~   31 (314)
                      .||||++|+.+++.|+++.    .+++.+.++...
T Consensus         7 vGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~   41 (146)
T d1t4ba1           7 IGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLG   41 (146)
T ss_dssp             ESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT
T ss_pred             ECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccc
Confidence            4999999999999888763    366666655443

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.59  E-value=0.00092  Score=49.99  Aligned_cols=91  Identities=18%  Similarity=0.185  Sum_probs=60.7

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHh---hhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS---LSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~---~~~~~~d~vi   77 (314)
                      +||+|.+|..+++.+...|.+|+++++++++.. .+..          .+...+ .|..+++..+++   ....++|++|
T Consensus        32 ~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~-~l~~----------~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~   99 (183)
T d1pqwa_          32 HSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE-MLSR----------LGVEYV-GDSRSVDFADEILELTDGYGVDVVL   99 (183)
T ss_dssp             TTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHHT----------TCCSEE-EETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred             ECCCCCcccccchhhccccccceeeeccccccc-cccc----------cccccc-ccCCccCHHHHHHHHhCCCCEEEEE
Confidence            589999999999999999999999998766532 1111          233322 456665433333   3334799999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ++.|.  ......++.++...++|.++.
T Consensus       100 d~~g~--~~~~~~~~~l~~~G~~v~~G~  125 (183)
T d1pqwa_         100 NSLAG--EAIQRGVQILAPGGRFIELGK  125 (183)
T ss_dssp             ECCCT--HHHHHHHHTEEEEEEEEECSC
T ss_pred             ecccc--hHHHHHHHHhcCCCEEEEEcc
Confidence            99984  344556677774468887643

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.58  E-value=0.00084  Score=49.92  Aligned_cols=92  Identities=16%  Similarity=0.090  Sum_probs=58.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh-hhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~l~~~~~~~~~d~vi~~   79 (314)
                      +||+|.+|...++.+...|.+|+++++++++.....         +  .+...+ .|..+. ++........++|+||++
T Consensus        38 ~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~---------~--lGa~~v-i~~~~~~~~~~~~~~~~gvD~vid~  105 (176)
T d1xa0a2          38 TGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR---------V--LGAKEV-LAREDVMAERIRPLDKQRWAAAVDP  105 (176)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH---------H--TTCSEE-EECC---------CCSCCEEEEEEC
T ss_pred             EeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH---------h--ccccee-eecchhHHHHHHHhhccCcCEEEEc
Confidence            589999999999999999999999999877642111         1  122222 133221 222233344579999999


Q ss_pred             CCCCcccHHHHHHhCCCCCcEEEEeec
Q 021331           80 NGREADEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        80 a~~~~~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      .|..  .....++.++...|++.++..
T Consensus       106 vgg~--~~~~~l~~l~~~Griv~~G~~  130 (176)
T d1xa0a2         106 VGGR--TLATVLSRMRYGGAVAVSGLT  130 (176)
T ss_dssp             STTT--THHHHHHTEEEEEEEEECSCC
T ss_pred             CCch--hHHHHHHHhCCCceEEEeecc
Confidence            8743  356677777755688866653

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.43  E-value=0.0005  Score=52.00  Aligned_cols=32  Identities=28%  Similarity=0.397  Sum_probs=29.2

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   32 (314)
                      +||+|.+|.+|++.|++.||+|++.+|++++.
T Consensus         6 igGaG~iG~alA~~la~~G~~V~l~~R~~e~~   37 (212)
T d1jaya_           6 LGGTGNLGKGLALRLATLGHEIVVGSRREEKA   37 (212)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSHHHH
T ss_pred             EeCCcHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            48889999999999999999999999987663

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.35  E-value=0.0018  Score=47.26  Aligned_cols=105  Identities=19%  Similarity=0.204  Sum_probs=62.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|..+++.|+++||+|++.+|++++......           .+...       .+...++.+  ++|+||-+...
T Consensus         7 GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~-----------~~~~~-------~~~~~e~~~--~~d~ii~~v~~   66 (161)
T d1vpda2           7 GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-----------AGAET-------ASTAKAIAE--QCDVIITMLPN   66 (161)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TTCEE-------CSSHHHHHH--HCSEEEECCSS
T ss_pred             ehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH-----------hhhhh-------cccHHHHHh--CCCeEEEEcCC
Confidence            57999999999999999999999998776432111           12211       123456666  78998877643


Q ss_pred             CcccHHHHH-------HhCCCCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCceEEE
Q 021331           83 EADEVEPIL-------DALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSL  142 (314)
Q Consensus        83 ~~~~~~~~~-------~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~~~il  142 (314)
                       ...++.++       ..+...+-+|-.||..              ........+.+++.++.++-.
T Consensus        67 -~~~v~~v~~~~~~~~~~~~~g~iiid~sT~~--------------p~~~~~~~~~~~~~g~~~vda  118 (161)
T d1vpda2          67 -SPHVKEVALGENGIIEGAKPGTVLIDMSSIA--------------PLASREISDALKAKGVEMLDA  118 (161)
T ss_dssp             -HHHHHHHHHSTTCHHHHCCTTCEEEECSCCC--------------HHHHHHHHHHHHTTTCEEEEC
T ss_pred             -HHHHHHHHhCCcchhhccCCCCEEEECCCCC--------------HHHHHHHHHHHHHcCCceecc
Confidence             33444443       2233333444444421              111234445566677877774

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.29  E-value=0.0013  Score=48.67  Aligned_cols=90  Identities=10%  Similarity=0.153  Sum_probs=59.8

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHH---hhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS---SLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~---~~~~~~~d~vi   77 (314)
                      +||+|.+|...++.+...|.+|+++++++++.. ...        +  -+... ..|..+++..++   .....++|+|+
T Consensus        35 ~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~-~~~--------~--~Ga~~-vi~~~~~~~~~~i~~~t~~~g~d~v~  102 (174)
T d1yb5a2          35 HGASGGVGLAACQIARAYGLKILGTAGTEEGQK-IVL--------Q--NGAHE-VFNHREVNYIDKIKKYVGEKGIDIII  102 (174)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHH--------H--TTCSE-EEETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred             EeccccccccccccccccCcccccccccccccc-ccc--------c--cCccc-ccccccccHHHHhhhhhccCCceEEe
Confidence            488999999999999999999999998765422 111        1  12222 236666543333   33334699999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEe
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCS  104 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~S  104 (314)
                      ++.+.  ......++.++...+++.++
T Consensus       103 d~~g~--~~~~~~~~~l~~~G~iv~~G  127 (174)
T d1yb5a2         103 EMLAN--VNLSKDLSLLSHGGRVIVVG  127 (174)
T ss_dssp             ESCHH--HHHHHHHHHEEEEEEEEECC
T ss_pred             ecccH--HHHHHHHhccCCCCEEEEEe
Confidence            99873  34556677777556888664

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.27  E-value=0.0029  Score=46.18  Aligned_cols=105  Identities=14%  Similarity=0.197  Sum_probs=62.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|.++++.|+++||+|.+.+|++.+......           .+.       .......+++.  .+|+|+-+...
T Consensus         8 GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~-----------~~~-------~~~~~~~e~~~--~~diii~~v~~   67 (162)
T d3cuma2           8 GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA-----------AGA-------SAARSARDAVQ--GADVVISMLPA   67 (162)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-----------TTC-------EECSSHHHHHT--SCSEEEECCSC
T ss_pred             EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhh-----------hhc-------cccchhhhhcc--ccCeeeecccc
Confidence            57999999999999999999999998766332111           111       11123456666  78988877653


Q ss_pred             CcccHHHHHHhC-------CCCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCceEEE
Q 021331           83 EADEVEPILDAL-------PNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSL  142 (314)
Q Consensus        83 ~~~~~~~~~~~~-------~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~~~il  142 (314)
                      . .....++...       ...+-+|-.||..              ...-...++.+++.++.+.-.
T Consensus        68 ~-~~~~~v~~~~~~~~~~l~~g~iiid~st~~--------------p~~~~~~~~~~~~~gi~~~da  119 (162)
T d3cuma2          68 S-QHVEGLYLDDDGLLAHIAPGTLVLECSTIA--------------PTSARKIHAAARERGLAMLDA  119 (162)
T ss_dssp             H-HHHHHHHHSTTCHHHHSCTTCEEEECSCCC--------------HHHHHHHHHHHHHTTCEEEEC
T ss_pred             h-hhHHHHHhccccccccCCCCCEEEECCCCC--------------HHHHHHHHHHHHHCCCcEEec
Confidence            2 3334443332       2223344344321              112334556677788888874

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.21  E-value=0.0016  Score=48.47  Aligned_cols=86  Identities=12%  Similarity=-0.001  Sum_probs=50.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |+|.+|..++..|.++||+|++++|+++...........   ..................++.+++.  ++|+||-+.. 
T Consensus         8 GaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~e~~~--~aD~iii~v~-   81 (184)
T d1bg6a2           8 GLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAI---IAEGPGLAGTAHPDLLTSDIGLAVK--DADVILIVVP-   81 (184)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSE---EEESSSCCEEECCSEEESCHHHHHT--TCSEEEECSC-
T ss_pred             CccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCC---chhhhhhhhhhhhhhhhhhhHhHhc--CCCEEEEEEc-
Confidence            459999999999999999999999986543211100000   0000111111111111234667777  8999998754 


Q ss_pred             CcccHHHHHHhCC
Q 021331           83 EADEVEPILDALP   95 (314)
Q Consensus        83 ~~~~~~~~~~~~~   95 (314)
                       ......+++.+.
T Consensus        82 -~~~~~~~~~~i~   93 (184)
T d1bg6a2          82 -AIHHASIAANIA   93 (184)
T ss_dssp             -GGGHHHHHHHHG
T ss_pred             -hhHHHHHHHHhh
Confidence             445566666554

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.21  E-value=0.0054  Score=47.19  Aligned_cols=64  Identities=11%  Similarity=0.074  Sum_probs=45.2

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChh----hHHHhhhcCCccEEE
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD----FVKSSLSAKGFDVVY   77 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~----~l~~~~~~~~~d~vi   77 (314)
                      -+||.+|.+|+++|..+|++|+.+........              ..++..+..  ...+    .+.+.+.  ++|++|
T Consensus        29 ~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~--------------p~~~~~~~~--~t~~~m~~~~~~~~~--~~D~~i   90 (223)
T d1u7za_          29 HSSGKMGFAIAAAAARRGANVTLVSGPVSLPT--------------PPFVKRVDV--MTALEMEAAVNASVQ--QQNIFI   90 (223)
T ss_dssp             CCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC--------------CTTEEEEEC--CSHHHHHHHHHHHGG--GCSEEE
T ss_pred             CCcHHHHHHHHHHHHHcCCchhhhhcccccCc--------------cccccccee--hhhHHHHHHHHhhhc--cceeEe
Confidence            36999999999999999999999987654311              135555544  3333    3334444  799999


Q ss_pred             EcCCCC
Q 021331           78 DINGRE   83 (314)
Q Consensus        78 ~~a~~~   83 (314)
                      ++|+..
T Consensus        91 ~aAAvs   96 (223)
T d1u7za_          91 GCAAVA   96 (223)
T ss_dssp             ECCBCC
T ss_pred             eeechh
Confidence            998873

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.06  E-value=0.0022  Score=45.87  Aligned_cols=30  Identities=27%  Similarity=0.444  Sum_probs=22.9

Q ss_pred             CCcccccHHHHHHHHHHCC---CeEEEEEcCCc
Q 021331            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKA   30 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g---~~V~~~~r~~~   30 (314)
                      .||||++|..+++.|.+++   .++..++.+.+
T Consensus         8 vGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~   40 (144)
T d2hjsa1           8 VGATGSVGEALVGLLDERDFPLHRLHLLASAES   40 (144)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTT
T ss_pred             ECCCCHHHHHHHHHHHhcCCCceEEEEEeeccc
Confidence            4999999999999997654   46776654443

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.05  E-value=0.0041  Score=46.02  Aligned_cols=114  Identities=16%  Similarity=0.120  Sum_probs=65.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|.++++.|++.||+|++.+|++++........         ....... -....+.+.+.+.  .+|.++-+...
T Consensus         9 GlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~---------~~~~~~~-~a~~~~~~~~~~~--~~~~ii~~~~~   76 (176)
T d2pgda2           9 GLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANE---------AKGTKVL-GAHSLEEMVSKLK--KPRRIILLVKA   76 (176)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTT---------TTTSSCE-ECSSHHHHHHHBC--SSCEEEECSCT
T ss_pred             eEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhc---------ccccccc-chhhhhhhhhhhc--ccceEEEecCc
Confidence            5699999999999999999999999987643221100         0000001 1234555666666  78888876543


Q ss_pred             Cc---ccHHHHHHhCCCCCcEEEEeeceeeccCCCCCccCccccchhhHHHHHHhcCCceEEE
Q 021331           83 EA---DEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCESRHKGKLNTESVLESKGVNWTSL  142 (314)
Q Consensus        83 ~~---~~~~~~~~~~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~k~~~e~~~~~~~~~~~il  142 (314)
                      ..   .....++..+...+.+|-.||...             ..++.. .+.+.+.++.+.-.
T Consensus        77 ~~~v~~v~~~l~~~~~~g~iiid~sT~~~-------------~~~~~~-~~~~~~~g~~~lda  125 (176)
T d2pgda2          77 GQAVDNFIEKLVPLLDIGDIIIDGGNSEY-------------RDTMRR-CRDLKDKGILFVGS  125 (176)
T ss_dssp             THHHHHHHHHHHHHCCTTCEEEECSCCCH-------------HHHHHH-HHHHHHTTCEEEEE
T ss_pred             hHHHHHHHHHHHhccccCcEEEecCcchh-------------HHHHHH-HHHHHhcCCceecc
Confidence            21   112344555554455665555321             122333 34455667777664

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.04  E-value=0.0024  Score=46.14  Aligned_cols=72  Identities=15%  Similarity=0.204  Sum_probs=53.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|-+|..+++.|.++|++|++++.+++.......       .....++.++.+|.+|++.++++-- .+++.+|-+...
T Consensus        10 G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~-------~~~~~~~~vi~Gd~~d~~~L~~a~i-~~a~~vi~~~~~   81 (153)
T d1id1a_          10 GHSILAINTILQLNQRGQNVTVISNLPEDDIKQLE-------QRLGDNADVIPGDSNDSSVLKKAGI-DRCRAILALSDN   81 (153)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHH-------HHHCTTCEEEESCTTSHHHHHHHTT-TTCSEEEECSSC
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHH-------HhhcCCcEEEEccCcchHHHHHhcc-ccCCEEEEcccc
Confidence            45899999999999999999999988754211110       0012579999999999998877532 368888877654

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.96  E-value=0.0077  Score=42.84  Aligned_cols=71  Identities=25%  Similarity=0.299  Sum_probs=44.0

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      +||+|.+|++++-.|..++  .+++.++.++.+.. .+      .+.+. ........-+ ...+..+.++  ++|+||.
T Consensus         6 iGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~-a~------Dl~~~-~~~~~~~~~~-~~~~~~~~~~--~aDivVi   74 (144)
T d1mlda1           6 LGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV-AA------DLSHI-ETRATVKGYL-GPEQLPDCLK--GCDVVVI   74 (144)
T ss_dssp             ETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH-HH------HHTTS-SSSCEEEEEE-SGGGHHHHHT--TCSEEEE
T ss_pred             ECCCChHHHHHHHHHHhCCccceEEEEeccccchh-hH------HHhhh-hhhcCCCeEE-cCCChHHHhC--CCCEEEE
Confidence            4889999999999998887  47888887654311 00      01100 0111111112 3445567777  9999999


Q ss_pred             cCCC
Q 021331           79 INGR   82 (314)
Q Consensus        79 ~a~~   82 (314)
                      ++|.
T Consensus        75 tag~   78 (144)
T d1mlda1          75 PAGV   78 (144)
T ss_dssp             CCSC
T ss_pred             CCCc
Confidence            9885

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=95.94  E-value=0.026  Score=40.28  Aligned_cols=32  Identities=22%  Similarity=0.460  Sum_probs=28.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCccc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   32 (314)
                      +||.|.+|+.+++.|.++||+|.+.+|+....
T Consensus        15 IGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~   46 (152)
T d2pv7a2          15 VGGYGKLGGLFARYLRASGYPISILDREDWAV   46 (152)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG
T ss_pred             EcCCCHHHHHHHHHHHHcCCCcEecccccccc
Confidence            36799999999999999999999999987653

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.88  E-value=0.0024  Score=46.94  Aligned_cols=87  Identities=13%  Similarity=0.066  Sum_probs=53.4

Q ss_pred             ccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCC-ChhhHHHhhhcCCccEEEEcCCC
Q 021331            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      +|.+|...++.+...|.+|+++++++++...         ..+  -+...+. |.. +.+..+....  ++|.++.+.+.
T Consensus        36 aG~vG~~a~q~ak~~G~~vi~~~~~~~k~~~---------a~~--lGa~~~i-~~~~~~~~~~~~~~--~~d~vi~~~~~  101 (168)
T d1piwa2          36 LGGIGSMGTLISKAMGAETYVISRSSRKRED---------AMK--MGADHYI-ATLEEGDWGEKYFD--TFDLIVVCASS  101 (168)
T ss_dssp             CSHHHHHHHHHHHHHTCEEEEEESSSTTHHH---------HHH--HTCSEEE-EGGGTSCHHHHSCS--CEEEEEECCSC
T ss_pred             CCCcchhHHHHhhhccccccccccchhHHHH---------hhc--cCCcEEe-eccchHHHHHhhhc--ccceEEEEecC
Confidence            4999999999888889999999998776321         111  1232222 333 3344444444  79999998765


Q ss_pred             Cccc-HHHHHHhCCCCCcEEEEe
Q 021331           83 EADE-VEPILDALPNLEQFIYCS  104 (314)
Q Consensus        83 ~~~~-~~~~~~~~~~~~~~i~~S  104 (314)
                      .... ....++.++...+++.++
T Consensus       102 ~~~~~~~~~~~~l~~~G~iv~~G  124 (168)
T d1piwa2         102 LTDIDFNIMPKAMKVGGRIVSIS  124 (168)
T ss_dssp             STTCCTTTGGGGEEEEEEEEECC
T ss_pred             CccchHHHHHHHhhccceEEEec
Confidence            4332 233455555445677654

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.77  E-value=0.002  Score=47.15  Aligned_cols=29  Identities=28%  Similarity=0.405  Sum_probs=26.4

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |.|.+|+.+++.|.++||+|++.+|+++.
T Consensus         7 G~G~mG~~lA~~l~~~g~~V~~~d~~~~~   35 (165)
T d2f1ka2           7 GLGLIGASLAGDLRRRGHYLIGVSRQQST   35 (165)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             eecHHHHHHHHHHHHCCCEEEEEECCchH
Confidence            56999999999999999999999998755

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=95.69  E-value=0.0055  Score=45.35  Aligned_cols=91  Identities=18%  Similarity=0.197  Sum_probs=59.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHH---hhhcCCccEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS---SLSAKGFDVVY   77 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~---~~~~~~~d~vi   77 (314)
                      +||+|.+|..+++.+...|.+|++++++.++.....         +  .+...+ .|..+++..++   +-...++|+|+
T Consensus        35 ~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~---------~--lGa~~v-i~~~~~d~~~~v~~~t~g~g~d~v~  102 (179)
T d1qora2          35 HAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL---------K--AGAWQV-INYREEDLVERLKEITGGKKVRVVY  102 (179)
T ss_dssp             SSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH---------H--HTCSEE-EETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             EccccccchHHHHHHHHhCCeEeecccchHHHHHHH---------h--cCCeEE-EECCCCCHHHHHHHHhCCCCeEEEE
Confidence            589999999999999999999999999987643111         1  223322 46766543333   33334689999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ++.+..  ......+.+....+++..+.
T Consensus       103 d~~g~~--~~~~~~~~l~~~G~~v~~g~  128 (179)
T d1qora2         103 DSVGRD--TWERSLDCLQRRGLMVSFGN  128 (179)
T ss_dssp             ECSCGG--GHHHHHHTEEEEEEEEECCC
T ss_pred             eCccHH--HHHHHHHHHhcCCeeeeccc
Confidence            998743  34556666664446665443

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.61  E-value=0.0018  Score=48.07  Aligned_cols=91  Identities=19%  Similarity=0.161  Sum_probs=59.3

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      +||+|.+|...++.+...|.+|+++++++++... +.          ..+...+ .|..+.+. .+.+.....|.+|++.
T Consensus        38 ~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~-~~----------~lGad~v-i~~~~~~~-~~~l~~~~~~~vvD~V  104 (177)
T d1o89a2          38 TGASGGVGSTAVALLHKLGYQVVAVSGRESTHEY-LK----------SLGASRV-LPRDEFAE-SRPLEKQVWAGAIDTV  104 (177)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH-HH----------HHTEEEE-EEGGGSSS-CCSSCCCCEEEEEESS
T ss_pred             EEccccchHHHHHHHHHcCCCeEEEecchhHHHH-HH----------hhccccc-cccccHHH-HHHHHhhcCCeeEEEc
Confidence            5899999999999999999999999998877321 11          1233333 24433322 2334444689999987


Q ss_pred             CCCcccHHHHHHhCCCCCcEEEEeec
Q 021331           81 GREADEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      +.  ......++.++...|+|.++..
T Consensus       105 gg--~~~~~~l~~l~~~Griv~~G~~  128 (177)
T d1o89a2         105 GD--KVLAKVLAQMNYGGCVAACGLA  128 (177)
T ss_dssp             CH--HHHHHHHHTEEEEEEEEECCCT
T ss_pred             ch--HHHHHHHHHhccccceEeeccc
Confidence            63  2345566666655578866543

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.59  E-value=0.026  Score=39.01  Aligned_cols=25  Identities=20%  Similarity=0.440  Sum_probs=21.9

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLF   25 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~   25 (314)
                      .|++|.+|+.+++.+.++++++++.
T Consensus         6 ~G~~GrMG~~i~~~~~~~~~~l~~~   30 (128)
T d1vm6a3           6 VGYSGRMGQEIQKVFSEKGHELVLK   30 (128)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             ECCCCHHHHHHHHHHhcCCCeEEEE
Confidence            4899999999999999999987764

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=95.58  E-value=0.0018  Score=47.57  Aligned_cols=91  Identities=18%  Similarity=0.144  Sum_probs=55.1

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh-hhHHHhhhcCCccEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~l~~~~~~~~~d~vi~~   79 (314)
                      +||+|.+|...++.....|.+|++++++.++....         .+  .+...+ .|..+. ..........++|+|+++
T Consensus        30 ~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~---------~~--lGad~v-i~~~~~~~~~~~~~~~~gvd~vid~   97 (167)
T d1tt7a2          30 TGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL---------KQ--LGASEV-ISREDVYDGTLKALSKQQWQGAVDP   97 (167)
T ss_dssp             ESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH---------HH--HTCSEE-EEHHHHCSSCCCSSCCCCEEEEEES
T ss_pred             eCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH---------Hh--hcccce-EeccchhchhhhcccCCCceEEEec
Confidence            48999999999999999999999999988764311         11  122222 122110 001111222379999999


Q ss_pred             CCCCcccHHHHHHhCCCCCcEEEEee
Q 021331           80 NGREADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        80 a~~~~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      .+-  ......++.++...+++.++.
T Consensus        98 vgg--~~~~~~~~~l~~~G~iv~~G~  121 (167)
T d1tt7a2          98 VGG--KQLASLLSKIQYGGSVAVSGL  121 (167)
T ss_dssp             CCT--HHHHHHHTTEEEEEEEEECCC
T ss_pred             CcH--HHHHHHHHHhccCceEEEeec
Confidence            763  234456666665557775543

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.42  E-value=0.022  Score=42.14  Aligned_cols=79  Identities=16%  Similarity=0.090  Sum_probs=54.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|..-|.+|++.+|.+....                        ..-.+++++++.  .+|+|+.+...
T Consensus        49 G~G~IG~~va~~l~~~g~~v~~~d~~~~~~~------------------------~~~~~~l~ell~--~sDiv~~~~pl  102 (181)
T d1qp8a1          49 GLGEIGTRVGKILAALGAQVRGFSRTPKEGP------------------------WRFTNSLEEALR--EARAAVCALPL  102 (181)
T ss_dssp             SCSTHHHHHHHHHHHTTCEEEEECSSCCCSS------------------------SCCBSCSHHHHT--TCSEEEECCCC
T ss_pred             ccccccccceeeeeccccccccccccccccc------------------------eeeeechhhhhh--ccchhhccccc
Confidence            5699999999999999999999998764411                        001124678888  99999876654


Q ss_pred             Ccc----cHHHHHHhCCCCCcEEEEeece
Q 021331           83 EAD----EVEPILDALPNLEQFIYCSSAG  107 (314)
Q Consensus        83 ~~~----~~~~~~~~~~~~~~~i~~Ss~~  107 (314)
                      +..    -....++.|+....||.+|-..
T Consensus       103 ~~~t~~li~~~~l~~mk~~ailIN~~RG~  131 (181)
T d1qp8a1         103 NKHTRGLVKYQHLALMAEDAVFVNVGRAE  131 (181)
T ss_dssp             STTTTTCBCHHHHTTSCTTCEEEECSCGG
T ss_pred             ccccccccccceeeeccccceEEeccccc
Confidence            321    1345666677656677666433

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.38  E-value=0.0071  Score=37.80  Aligned_cols=31  Identities=26%  Similarity=0.251  Sum_probs=28.6

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      +||+|.+|...++.+...|++|+++++++++
T Consensus        38 ~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k   68 (77)
T d1o8ca2          38 TGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (77)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             EeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence            5999999999999999999999999998766

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=95.27  E-value=0.011  Score=43.19  Aligned_cols=91  Identities=12%  Similarity=0.082  Sum_probs=57.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCC--ChhhHHHhhhc---CCccEEE
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--DYDFVKSSLSA---KGFDVVY   77 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--d~~~l~~~~~~---~~~d~vi   77 (314)
                      |+|.+|...++.+...|.+|+++++++.+.....         ++.... .+..|..  +...+.+.+..   .++|+||
T Consensus        34 G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~---------~~ga~~-~~~~~~~~~~~~~~~~~~~~~~g~g~D~vi  103 (170)
T d1e3ja2          34 GAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK---------NCGADV-TLVVDPAKEEESSIIERIRSAIGDLPNVTI  103 (170)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---------HTTCSE-EEECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred             cccccchhhHhhHhhhcccccccchHHHHHHHHH---------HcCCcE-EEeccccccccchhhhhhhcccccCCceee
Confidence            4799999999999999999999999877642111         111222 2222322  33333333331   3699999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEe
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCS  104 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~S  104 (314)
                      .++|. .......++.++...+++.++
T Consensus       104 d~~g~-~~~~~~a~~~~~~~G~iv~~G  129 (170)
T d1e3ja2         104 DCSGN-EKCITIGINITRTGGTLMLVG  129 (170)
T ss_dssp             ECSCC-HHHHHHHHHHSCTTCEEEECS
T ss_pred             ecCCC-hHHHHHHHHHHhcCCceEEEe
Confidence            99974 233455677788666888665

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.08  E-value=0.015  Score=43.61  Aligned_cols=80  Identities=14%  Similarity=0.081  Sum_probs=53.7

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|..-|.+|++.++.......                     .+....+++.+++.  .+|+|+.+...
T Consensus        50 G~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~---------------------~~~~~~~~l~~~l~--~sDii~~~~pl  106 (197)
T d1j4aa1          50 GTGHIGQVFMQIMEGFGAKVITYDIFRNPELE---------------------KKGYYVDSLDDLYK--QADVISLHVPD  106 (197)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH---------------------HTTCBCSCHHHHHH--HCSEEEECSCC
T ss_pred             cccccchhHHHhHhhhcccccccCcccccccc---------------------cceeeecccccccc--ccccccccCCc
Confidence            57999999999999999999998876544210                     01112345788888  89988876654


Q ss_pred             Ccc----cHHHHHHhCCCCCcEEEEee
Q 021331           83 EAD----EVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        83 ~~~----~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +..    -....+..|+....+|.+|=
T Consensus       107 t~~T~~li~~~~l~~mk~~a~lIN~sR  133 (197)
T d1j4aa1         107 VPANVHMINDESIAKMKQDVVIVNVSR  133 (197)
T ss_dssp             CGGGTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             cccccccccHHHHhhhCCccEEEecCc
Confidence            322    23456677776556665543

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.04  E-value=0.02  Score=42.62  Aligned_cols=95  Identities=15%  Similarity=0.165  Sum_probs=53.5

Q ss_pred             CCcccccHHHHHHHHHHCCCe-EEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChh---hHHHhhhcCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~l~~~~~~~~~d~v   76 (314)
                      +||+|.+|...++.+...|.+ |++++++++.......          ..+.. ...|..+++   .+.++. ..++|+|
T Consensus        37 ~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~----------~~gad-~vi~~~~~~~~~~~~~~~-~~GvDvv  104 (187)
T d1vj1a2          37 SGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTS----------ELGFD-AAVNYKTGNVAEQLREAC-PGGVDVY  104 (187)
T ss_dssp             SSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHH----------HSCCS-EEEETTSSCHHHHHHHHC-TTCEEEE
T ss_pred             ECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhh----------cccce-EEeeccchhHHHHHHHHh-ccCceEE
Confidence            589999999999999989975 4445555444211110          01222 223555433   233332 3479999


Q ss_pred             EEcCCCCcccHHHHHHhCCCCCcEEEEeeceee
Q 021331           77 YDINGREADEVEPILDALPNLEQFIYCSSAGVY  109 (314)
Q Consensus        77 i~~a~~~~~~~~~~~~~~~~~~~~i~~Ss~~v~  109 (314)
                      +++.|.  ......++.++...|++.++..+.|
T Consensus       105 ~D~vGg--~~~~~~~~~l~~~G~iv~~G~~s~~  135 (187)
T d1vj1a2         105 FDNVGG--DISNTVISQMNENSHIILCGQISQY  135 (187)
T ss_dssp             EESSCH--HHHHHHHTTEEEEEEEEEC------
T ss_pred             EecCCc--hhHHHHhhhccccccEEEecccccc
Confidence            999983  3355566666655688877665544

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.88  E-value=0.0063  Score=43.80  Aligned_cols=78  Identities=12%  Similarity=0.006  Sum_probs=50.5

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |+|.+|+++++.|++.|++|++.+|+.++......         . -++.+       ..+..++.+  ++|+||-+.- 
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~---------~-~g~~~-------~~~~~~~~~--~~dvIilavk-   66 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAE---------Q-LALPY-------AMSHQDLID--QVDLVILGIK-   66 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHH---------H-HTCCB-------CSSHHHHHH--TCSEEEECSC-
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcc---------c-cceee-------echhhhhhh--ccceeeeecc-
Confidence            67999999999999999999999988665321110         0 11111       123456667  8999997764 


Q ss_pred             CcccHHHHHHhCCCCCcEE
Q 021331           83 EADEVEPILDALPNLEQFI  101 (314)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~i  101 (314)
                       +.....+++.+...+.+|
T Consensus        67 -p~~~~~vl~~l~~~~~ii   84 (152)
T d2ahra2          67 -PQLFETVLKPLHFKQPII   84 (152)
T ss_dssp             -GGGHHHHHTTSCCCSCEE
T ss_pred             -hHhHHHHhhhcccceeEe
Confidence             445566666665433433

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=94.83  E-value=0.018  Score=42.89  Aligned_cols=96  Identities=14%  Similarity=0.202  Sum_probs=56.5

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEec---CCCh-hhHHHhhh--cCCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD---RKDY-DFVKSSLS--AKGFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D---~~d~-~~l~~~~~--~~~~d   74 (314)
                      +||+|.+|...++.+...|.+|++++|+++.......     .+.++ ..-.++.-|   ..+. +.+.+...  ..++|
T Consensus        36 ~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~-----~~~~l-Gad~vi~~~~~~~~~~~~~v~~~~~~~g~~vd  109 (189)
T d1gu7a2          36 NGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVA-----SLKEL-GATQVITEDQNNSREFGPTIKEWIKQSGGEAK  109 (189)
T ss_dssp             SCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHH-----HHHHH-TCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEE
T ss_pred             eCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHh-----hhhhc-cccEEEeccccchhHHHHHHHHHHhhccCCce
Confidence            4889999999999999999999999987665321110     01111 111222221   1111 12333221  12599


Q ss_pred             EEEEcCCCCcccHHHHHHhCCCCCcEEEEe
Q 021331           75 VVYDINGREADEVEPILDALPNLEQFIYCS  104 (314)
Q Consensus        75 ~vi~~a~~~~~~~~~~~~~~~~~~~~i~~S  104 (314)
                      +++++.|.  ......++.++...++|.++
T Consensus       110 vv~D~vg~--~~~~~~~~~l~~~G~~v~~G  137 (189)
T d1gu7a2         110 LALNCVGG--KSSTGIARKLNNNGLMLTYG  137 (189)
T ss_dssp             EEEESSCH--HHHHHHHHTSCTTCEEEECC
T ss_pred             EEEECCCc--chhhhhhhhhcCCcEEEEEC
Confidence            99999873  33456777888666888554

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.76  E-value=0.0071  Score=43.47  Aligned_cols=60  Identities=15%  Similarity=0.119  Sum_probs=41.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|+.+++.|+++|++|++.++.+++......           .+..+.       ++..++++  .+|+||-+...
T Consensus         7 G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~-----------~~~~~~-------~~~~e~~~--~~diIi~~v~~   66 (152)
T d1i36a2           7 GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERA-----------RTVGVT-------ETSEEDVY--SCPVVISAVTP   66 (152)
T ss_dssp             SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHH-----------HHHTCE-------ECCHHHHH--TSSEEEECSCG
T ss_pred             cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhh-----------hccccc-------ccHHHHHh--hcCeEEEEecC
Confidence            57999999999999999999998877765321111           111111       12345667  89999988654

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=94.65  E-value=0.035  Score=39.30  Aligned_cols=29  Identities=21%  Similarity=0.406  Sum_probs=21.8

Q ss_pred             CCcccccHHHHHHHHHHCC----CeEEEEEcCC
Q 021331            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGK   29 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g----~~V~~~~r~~   29 (314)
                      .||||++|+.+++.|++..    .++..++.+.
T Consensus         6 iGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~   38 (147)
T d1mb4a1           6 VGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ   38 (147)
T ss_dssp             ESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSC
T ss_pred             ECCccHHHHHHHHHHHhcCCCCceEEEEecccc
Confidence            4999999999999988753    3566555443

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.64  E-value=0.0044  Score=45.17  Aligned_cols=30  Identities=30%  Similarity=0.451  Sum_probs=26.8

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~   32 (314)
                      |+|.+|..++..|.+.|++|++++|+....
T Consensus         7 GaG~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           7 GCGALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             CcCHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            349999999999999999999999987653

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.40  E-value=0.06  Score=37.48  Aligned_cols=26  Identities=12%  Similarity=0.197  Sum_probs=21.0

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLFT   26 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~~   26 (314)
                      .|++|.+|+.+++.+.+. ++++.+..
T Consensus         5 ~Ga~GrMG~~i~~~i~~~~~~~l~~~~   31 (135)
T d1yl7a1           5 LGAKGKVGATMVRAVAAADDLTLSAEL   31 (135)
T ss_dssp             ETTTSHHHHHHHHHHHHSTTSEEEEEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence            489999999999998776 57776643

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.36  E-value=0.051  Score=40.70  Aligned_cols=78  Identities=17%  Similarity=0.089  Sum_probs=52.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|..-|.+|++.++......  .            ..+        +..+++++++  .+|+|+.+...
T Consensus        52 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~--~------------~~~--------~~~~l~~l~~--~~D~v~~~~pl  107 (199)
T d1dxya1          52 GTGHIGQVAIKLFKGFGAKVIAYDPYPMKGD--H------------PDF--------DYVSLEDLFK--QSDVIDLHVPG  107 (199)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSSC--C------------TTC--------EECCHHHHHH--HCSEEEECCCC
T ss_pred             ecccccccccccccccceeeeccCCccchhh--h------------cch--------hHHHHHHHHH--hcccceeeecc
Confidence            6799999999999999999999998654411  0            111        1234778888  88998866554


Q ss_pred             Ccc----cHHHHHHhCCCCCcEEEEe
Q 021331           83 EAD----EVEPILDALPNLEQFIYCS  104 (314)
Q Consensus        83 ~~~----~~~~~~~~~~~~~~~i~~S  104 (314)
                      +..    -....+..|+....+|.+|
T Consensus       108 t~~T~~li~~~~l~~mk~~a~lIN~a  133 (199)
T d1dxya1         108 IEQNTHIINEAAFNLMKPGAIVINTA  133 (199)
T ss_dssp             CGGGTTSBCHHHHHHSCTTEEEEECS
T ss_pred             cccccccccHHHhhccCCceEEEecc
Confidence            332    1345666777655666544

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.27  E-value=0.048  Score=40.10  Aligned_cols=84  Identities=18%  Similarity=0.175  Sum_probs=50.4

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCccc-ccCC-CCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQL-PGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |+|..|.+++..|.++|++|++..|..++. ...+ .......     -+......++.-.+++.++++  ++|+||.+.
T Consensus         7 GaG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~-----~~~~~~~~~i~~~~~~~~~~~--~ad~Ii~av   79 (180)
T d1txga2           7 GAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPR-----LGVKLNGVEIFWPEQLEKCLE--NAEVVLLGV   79 (180)
T ss_dssp             SCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTT-----TTBCCCSEEEECGGGHHHHHT--TCSEEEECS
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhh-----hcchhccccccccccHHHHHh--ccchhhccc
Confidence            569999999999999999999998854321 0000 0000000     011111112233456788888  899998866


Q ss_pred             CCCcccHHHHHHhCC
Q 021331           81 GREADEVEPILDALP   95 (314)
Q Consensus        81 ~~~~~~~~~~~~~~~   95 (314)
                      .  ....+.+++.+.
T Consensus        80 p--s~~~~~~~~~l~   92 (180)
T d1txga2          80 S--TDGVLPVMSRIL   92 (180)
T ss_dssp             C--GGGHHHHHHHHT
T ss_pred             c--hhhhHHHHHhhc
Confidence            4  556666666655

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.01  E-value=0.049  Score=39.60  Aligned_cols=90  Identities=12%  Similarity=0.092  Sum_probs=57.5

Q ss_pred             cccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceE-EEEecCCChhhHHHhhh---cCCccEEE
Q 021331            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKDYDFVKSSLS---AKGFDVVY   77 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~l~~~~~---~~~~d~vi   77 (314)
                      |+|.+|...++.+...|. +|+++++++.+.....         +  -+.. ++..+-.+.....+.+.   ..++|+||
T Consensus        34 G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~---------~--~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvi  102 (171)
T d1pl8a2          34 GAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK---------E--IGADLVLQISKESPQEIARKVEGQLGCKPEVTI  102 (171)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH---------H--TTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred             CCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHH---------H--hCCcccccccccccccccccccccCCCCceEEE
Confidence            459999999999999997 7999998876642111         0  1222 23333334444444332   23689999


Q ss_pred             EcCCCCcccHHHHHHhCCCCCcEEEEe
Q 021331           78 DINGREADEVEPILDALPNLEQFIYCS  104 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~i~~S  104 (314)
                      .+.|. .......++.++...++++++
T Consensus       103 d~~G~-~~~~~~a~~~~~~gG~iv~~G  128 (171)
T d1pl8a2         103 ECTGA-EASIQAGIYATRSGGTLVLVG  128 (171)
T ss_dssp             ECSCC-HHHHHHHHHHSCTTCEEEECS
T ss_pred             eccCC-chhHHHHHHHhcCCCEEEEEe
Confidence            99985 333455677777666888765

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.00  E-value=0.011  Score=42.01  Aligned_cols=30  Identities=27%  Similarity=0.412  Sum_probs=26.0

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCc
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKA   30 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~   30 (314)
                      +||+|.+|..++..|+.++  .++..+++++.
T Consensus         6 iGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~   37 (145)
T d1hyea1           6 IGASGRVGSATALLLAKEPFMKDLVLIGREHS   37 (145)
T ss_dssp             ETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG
T ss_pred             ECCCChHHHHHHHHHHhCCcccccccccchhh
Confidence            4889999999999999988  58999998753

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=93.95  E-value=0.0072  Score=38.98  Aligned_cols=57  Identities=12%  Similarity=-0.045  Sum_probs=38.3

Q ss_pred             HHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCCCc
Q 021331           10 FLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREA   84 (314)
Q Consensus        10 ~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~~~   84 (314)
                      .||+.|+++|+.|.+-|+...+....+.          ..++.+..+  .+++.    +.  ++|.||...+...
T Consensus        16 ~LA~~L~~~G~~VsGSD~~~~~~t~~L~----------~~Gi~i~~g--h~~~~----i~--~~d~vV~SsAI~~   72 (89)
T d1j6ua1          16 AVALHEFSNGNDVYGSNIEETERTAYLR----------KLGIPIFVP--HSADN----WY--DPDLVIKTPAVRD   72 (89)
T ss_dssp             HHHHHHHHTTCEEEEECSSCCHHHHHHH----------HTTCCEESS--CCTTS----CC--CCSEEEECTTCCT
T ss_pred             HHHHHHHhCCCeEEEEeCCCChhHHHHH----------HCCCeEEee--ecccc----cC--CCCEEEEecCcCC
Confidence            5799999999999999988765443332          256666543  22222    23  7899998887643

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=93.94  E-value=0.021  Score=41.59  Aligned_cols=86  Identities=14%  Similarity=0.121  Sum_probs=56.7

Q ss_pred             ccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCCC
Q 021331            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (314)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~~   83 (314)
                      +|.+|...++.+...|.+++++++++++.. ..        .+  -+... ..|..+.+......+  ++|++|.+.+..
T Consensus        39 aG~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a--------~~--lGad~-~i~~~~~~~~~~~~~--~~D~vid~~g~~  104 (168)
T d1uufa2          39 IGGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AA--------KA--LGADE-VVNSRNADEMAAHLK--SFDFILNTVAAP  104 (168)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEESSGGGHH-HH--------HH--HTCSE-EEETTCHHHHHTTTT--CEEEEEECCSSC
T ss_pred             cchHHHHHHHHhhcccccchhhccchhHHH-HH--------hc--cCCcE-EEECchhhHHHHhcC--CCceeeeeeecc
Confidence            488999999999999999999998776632 11        11  12222 246767666655555  899999998753


Q ss_pred             cccHHHHHHhCCCCCcEEEEe
Q 021331           84 ADEVEPILDALPNLEQFIYCS  104 (314)
Q Consensus        84 ~~~~~~~~~~~~~~~~~i~~S  104 (314)
                      . .....++.+....+++.++
T Consensus       105 ~-~~~~~~~~l~~~G~iv~~G  124 (168)
T d1uufa2         105 H-NLDDFTTLLKRDGTMTLVG  124 (168)
T ss_dssp             C-CHHHHHTTEEEEEEEEECC
T ss_pred             h-hHHHHHHHHhcCCEEEEec
Confidence            3 2344556666445777654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.92  E-value=0.007  Score=45.41  Aligned_cols=102  Identities=15%  Similarity=0.199  Sum_probs=57.7

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhcc-Cce-----------EEEEecCCChhhHHHhhhc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKI-----------LHLKGDRKDYDFVKSSLSA   70 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~-----------~~~~~D~~d~~~l~~~~~~   70 (314)
                      |+|.+|..++..++..|++|++.+++++....... ...+.+.... .+.           .-....+....++.+++. 
T Consensus        11 GaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~-~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~d~~~a~~-   88 (192)
T d1f0ya2          11 GGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK-GIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAASVVH-   88 (192)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-HHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHHHHTT-
T ss_pred             CcCHHHHHHHHHHHhCCCcEEEEECChHHHHHHHh-hHHHHHHHHHHhhhhccchhhHHHHHHHHhhccccchhHhhhc-
Confidence            45999999999999999999999998764321110 0000000000 000           000000111123456666 


Q ss_pred             CCccEEEEcCCCCcccHHHHHHhCC--CCCcEEEEeece
Q 021331           71 KGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAG  107 (314)
Q Consensus        71 ~~~d~vi~~a~~~~~~~~~~~~~~~--~~~~~i~~Ss~~  107 (314)
                       ++|.|+-+...+...-+.++..+.  -....|+.|+.+
T Consensus        89 -~ad~ViEav~E~l~~K~~v~~~l~~~~~~~~ilasnTS  126 (192)
T d1f0ya2          89 -STDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTS  126 (192)
T ss_dssp             -SCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCS
T ss_pred             -ccceehhhcccchhHHHHHHHHHhhhcccCceeeccCc
Confidence             899999999888776666666655  123456556543

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=93.85  E-value=0.031  Score=41.23  Aligned_cols=89  Identities=12%  Similarity=0.132  Sum_probs=54.7

Q ss_pred             CcccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh--hh----HHHhhhcCCcc
Q 021331            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY--DF----VKSSLSAKGFD   74 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~--~~----l~~~~~~~~~d   74 (314)
                      |+ |.+|...++.+...|. +|+++++++++....         .+  -+... ..|..+.  .+    +.+.....++|
T Consensus        36 Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a---------~~--lGa~~-vi~~~~~~~~~~~~~i~~~~~~~g~D  102 (182)
T d1vj0a2          36 GA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA---------EE--IGADL-TLNRRETSVEERRKAIMDITHGRGAD  102 (182)
T ss_dssp             CC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH---------HH--TTCSE-EEETTTSCHHHHHHHHHHHTTTSCEE
T ss_pred             CC-Cccchhheeccccccccccccccccccccccc---------cc--ccceE-EEeccccchHHHHHHHHHhhCCCCce
Confidence            54 8999999999999996 799999987763211         11  12222 1244332  22    23333334699


Q ss_pred             EEEEcCCCCcccHHHHHHhCCCCCcEEEEe
Q 021331           75 VVYDINGREADEVEPILDALPNLEQFIYCS  104 (314)
Q Consensus        75 ~vi~~a~~~~~~~~~~~~~~~~~~~~i~~S  104 (314)
                      +||.+.|.. ......++.++...+++.++
T Consensus       103 vvid~vG~~-~~~~~a~~~l~~~G~iv~~G  131 (182)
T d1vj0a2         103 FILEATGDS-RALLEGSELLRRGGFYSVAG  131 (182)
T ss_dssp             EEEECSSCT-THHHHHHHHEEEEEEEEECC
T ss_pred             EEeecCCch-hHHHHHHHHhcCCCEEEEEe
Confidence            999998753 23455677777445777654

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.82  E-value=0.059  Score=39.94  Aligned_cols=80  Identities=16%  Similarity=0.034  Sum_probs=54.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|+.+++.|...|.+|++.++.......              ..   .     ..+.++++++  ..|+|+.+...
T Consensus        51 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~--------------~~---~-----~~~~l~ell~--~sDii~i~~pl  106 (188)
T d1sc6a1          51 GYGHIGTQLGILAESLGMYVYFYDIENKLPLG--------------NA---T-----QVQHLSDLLN--MSDVVSLHVPE  106 (188)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCCCCT--------------TC---E-----ECSCHHHHHH--HCSEEEECCCS
T ss_pred             ecccchhhhhhhcccccceEeeccccccchhh--------------hh---h-----hhhhHHHHHh--hccceeecccC
Confidence            67999999999999999999999876543110              01   1     1135778888  88998766554


Q ss_pred             Cc----ccHHHHHHhCCCCCcEEEEeec
Q 021331           83 EA----DEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        83 ~~----~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      +.    .-....++.|+....+|.+|-.
T Consensus       107 t~~T~~li~~~~l~~mk~~a~lIN~aRG  134 (188)
T d1sc6a1         107 NPSTKNMMGAKEISLMKPGSLLINASRG  134 (188)
T ss_dssp             STTTTTCBCHHHHHHSCTTEEEEECSCS
T ss_pred             CcchhhhccHHHHhhCCCCCEEEEcCcH
Confidence            32    2245677778765666665543

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=93.60  E-value=0.15  Score=36.68  Aligned_cols=26  Identities=19%  Similarity=0.114  Sum_probs=21.3

Q ss_pred             CCcccccHHHHHHHHHHC-CCeEEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKE-GHQVTLFT   26 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~~~   26 (314)
                      .|++|.+|+.+++.+.+. +.++++..
T Consensus        10 ~Ga~GrMG~~i~~~i~~~~~~~lv~~~   36 (162)
T d1diha1          10 AGAGGRMGRQLIQAALALEGVQLGAAL   36 (162)
T ss_dssp             TTTTSHHHHHHHHHHHHSTTEECCCEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence            589999999999999887 56766644

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=93.53  E-value=0.029  Score=41.11  Aligned_cols=92  Identities=16%  Similarity=0.156  Sum_probs=49.9

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhccCce-EEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      .||||++|..+++.|.+.. .++..+..+.....         .+.+.++.. .-......++   +++.+  ++|+||.
T Consensus         7 vGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~---------~i~~~~p~~~~~~~~~~~~~---~~~~~--~~dvvf~   72 (176)
T d1vkna1           7 IGATGYTGLELVRLLKNHPEAKITYLSSRTYAGK---------KLEEIFPSTLENSILSEFDP---EKVSK--NCDVLFT   72 (176)
T ss_dssp             ESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTS---------BHHHHCGGGCCCCBCBCCCH---HHHHH--HCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCceEEEeeccccCCC---------cccccCchhhccccccccCH---hHhcc--ccceEEE
Confidence            4999999999999998875 56766654432211         111111111 0001112232   34445  7999998


Q ss_pred             cCCCCcccHHHHHHhCCCCCcEEEEeeceee
Q 021331           79 INGREADEVEPILDALPNLEQFIYCSSAGVY  109 (314)
Q Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~i~~Ss~~v~  109 (314)
                      +.+....  ...+....+ .++|=.|++.-+
T Consensus        73 a~p~~~s--~~~~~~~~~-~~VIDlSadfRl  100 (176)
T d1vkna1          73 ALPAGAS--YDLVRELKG-VKIIDLGADFRF  100 (176)
T ss_dssp             CCSTTHH--HHHHTTCCS-CEEEESSSTTTC
T ss_pred             ccccHHH--HHHHHhhcc-ceEEecCccccc
Confidence            8775443  233333333 467767765544

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=93.48  E-value=0.024  Score=42.32  Aligned_cols=82  Identities=10%  Similarity=-0.008  Sum_probs=52.6

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|..-|.+|.+.++.......              ...     .+...++++++++  .+|+|+.+...
T Consensus        56 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~--------------~~~-----~~~~~~~l~~ll~--~sD~i~~~~pl  114 (193)
T d1mx3a1          56 GLGRVGQAVALRAKAFGFNVLFYDPYLSDGVE--------------RAL-----GLQRVSTLQDLLF--HSDCVTLHCGL  114 (193)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECTTSCTTHH--------------HHH-----TCEECSSHHHHHH--HCSEEEECCCC
T ss_pred             ccccccccceeeeeccccceeeccCcccccch--------------hhh-----ccccccchhhccc--cCCEEEEeecc
Confidence            57999999999999999999999876543110              000     1112345778888  88988765543


Q ss_pred             Cc----ccHHHHHHhCCCCCcEEEEee
Q 021331           83 EA----DEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        83 ~~----~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      +.    .-....+..|+....+|.+|=
T Consensus       115 t~~T~~li~~~~l~~mk~~a~lIN~sR  141 (193)
T d1mx3a1         115 NEHNHHLINDFTVKQMRQGAFLVNTAR  141 (193)
T ss_dssp             CTTCTTSBSHHHHTTSCTTEEEEECSC
T ss_pred             cccchhhhhHHHHhccCCCCeEEecCC
Confidence            32    123456666775556665543

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=93.41  E-value=0.031  Score=40.97  Aligned_cols=89  Identities=12%  Similarity=0.010  Sum_probs=54.7

Q ss_pred             cccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh---hhHHHhhhcCCccEEEE
Q 021331            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~l~~~~~~~~~d~vi~   78 (314)
                      |+|.+|...++.+...|. +|+++++++.+.....         +  -+... ..|..+.   +.+.+.....++|+||.
T Consensus        35 GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~---------~--lGa~~-~i~~~~~~~~~~v~~~t~g~G~D~vid  102 (174)
T d1jqba2          35 GIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK---------F--YGATD-ILNYKNGHIEDQVMKLTNGKGVDRVIM  102 (174)
T ss_dssp             CCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH---------H--HTCSE-EECGGGSCHHHHHHHHTTTSCEEEEEE
T ss_pred             cCCcchhhhhhhhhcccccccccccchhhhHHHHH---------h--hCccc-cccccchhHHHHHHHHhhccCcceEEE
Confidence            359999999999998895 7898888766532110         0  12221 2345443   33444444346999999


Q ss_pred             cCCCCcccHHHHHHhCCCCCcEEEEe
Q 021331           79 INGREADEVEPILDALPNLEQFIYCS  104 (314)
Q Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~i~~S  104 (314)
                      +.|.. ......++.++...+++.++
T Consensus       103 ~~g~~-~~~~~a~~~~~~~G~iv~~G  127 (174)
T d1jqba2         103 AGGGS-ETLSQAVKMVKPGGIISNIN  127 (174)
T ss_dssp             CSSCT-THHHHHHHHEEEEEEEEECC
T ss_pred             ccCCH-HHHHHHHHHHhcCCEEEEEe
Confidence            99854 22345566677555777654

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=93.29  E-value=0.0096  Score=43.14  Aligned_cols=63  Identities=19%  Similarity=0.130  Sum_probs=43.7

Q ss_pred             CcccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |+ |-+|..+++.|.+.|. +|++..|+.++......         . -+..     ..+.+++.+.+.  ++|+||.+.
T Consensus        31 Ga-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~---------~-~~~~-----~~~~~~~~~~l~--~~Divi~at   92 (159)
T d1gpja2          31 GA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELAR---------D-LGGE-----AVRFDELVDHLA--RSDVVVSAT   92 (159)
T ss_dssp             SC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH---------H-HTCE-----ECCGGGHHHHHH--TCSEEEECC
T ss_pred             CC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHH---------h-hhcc-----cccchhHHHHhc--cCCEEEEec
Confidence            54 9999999999999996 68888888655321111         0 0121     224456778888  999999987


Q ss_pred             CC
Q 021331           81 GR   82 (314)
Q Consensus        81 ~~   82 (314)
                      +.
T Consensus        93 ss   94 (159)
T d1gpja2          93 AA   94 (159)
T ss_dssp             SS
T ss_pred             CC
Confidence            64

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=93.19  E-value=0.038  Score=36.01  Aligned_cols=62  Identities=18%  Similarity=0.177  Sum_probs=40.5

Q ss_pred             cccH-HHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCCC
Q 021331            5 RFIG-VFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (314)
Q Consensus         5 G~iG-~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~~   83 (314)
                      |.+| ++||+.|.++|++|.+-++...+....+.          ..++.+..++-  ++    .+.  ++|.||...+..
T Consensus        17 gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~----------~~Gi~v~~g~~--~~----~i~--~~d~vV~S~AI~   78 (96)
T d1p3da1          17 GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLA----------QAGAKIYIGHA--EE----HIE--GASVVVVSSAIK   78 (96)
T ss_dssp             TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHH----------HTTCEEEESCC--GG----GGT--TCSEEEECTTSC
T ss_pred             CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHH----------HCCCeEEECCc--cc----cCC--CCCEEEECCCcC
Confidence            3344 66899999999999999988655333222          24666554433  22    234  789999887764


Q ss_pred             c
Q 021331           84 A   84 (314)
Q Consensus        84 ~   84 (314)
                      .
T Consensus        79 ~   79 (96)
T d1p3da1          79 D   79 (96)
T ss_dssp             T
T ss_pred             C
Confidence            3

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=93.06  E-value=0.075  Score=39.07  Aligned_cols=75  Identities=17%  Similarity=0.162  Sum_probs=52.1

Q ss_pred             cccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |+|..|++++..|.+.|. +++++.|+++...+...  ..+++.. .........++.+.+.+.+.+.  .+|+|||+..
T Consensus        25 GaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~--l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~diiIN~Tp   99 (182)
T d1vi2a1          25 GAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALA--FAQRVNE-NTDCVVTVTDLADQQAFAEALA--SADILTNGTK   99 (182)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHH--HHHHHHH-HSSCEEEEEETTCHHHHHHHHH--TCSEEEECSS
T ss_pred             CCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHH--HHHHHHh-hcCcceEeeecccccchhhhhc--ccceeccccC
Confidence            568999999999999984 78888998765322110  0001111 1234456778989888888888  9999999976


Q ss_pred             C
Q 021331           82 R   82 (314)
Q Consensus        82 ~   82 (314)
                      .
T Consensus       100 ~  100 (182)
T d1vi2a1         100 V  100 (182)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=93.03  E-value=0.015  Score=41.87  Aligned_cols=20  Identities=20%  Similarity=0.370  Sum_probs=17.6

Q ss_pred             CCcccccHHHHHHHHHHCCC
Q 021331            1 MGGTRFIGVFLSRLLVKEGH   20 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~   20 (314)
                      .||||++|..|++.|.+..+
T Consensus         7 vGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           7 VGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             ETTTSHHHHHHHHHHHTCCS
T ss_pred             ECCCcHHHHHHHHHHHcCCC
Confidence            49999999999999888754

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=92.97  E-value=0.033  Score=41.22  Aligned_cols=27  Identities=22%  Similarity=0.517  Sum_probs=22.1

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEc
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTR   27 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r   27 (314)
                      .||||++|..+++.|.+.. .++..+..
T Consensus        11 lGATGyvG~elirLL~~HP~~ei~~l~S   38 (183)
T d2cvoa1          11 LGASGYTGAEIVRLLANHPQFRIKVMTA   38 (183)
T ss_dssp             ESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred             ECcccHHHHHHHHHHHhCCCceEEEEec
Confidence            4999999999999999885 56666653

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.76  E-value=0.16  Score=40.26  Aligned_cols=28  Identities=14%  Similarity=0.216  Sum_probs=25.6

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~   30 (314)
                      +||.+|.++|++|+.+|++|+.+.+..+
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~~s   71 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRARS   71 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecCCc
Confidence            6899999999999999999999987754

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=92.71  E-value=0.11  Score=33.37  Aligned_cols=64  Identities=14%  Similarity=0.212  Sum_probs=42.8

Q ss_pred             ccccHHHHHHHHHHCCCeEEEEEcCCcccc-cCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      -|-.|.++++.|.++|++|++.+.+..... ..+.           ....++.+.. +.    ..+.  ++|.||-..|.
T Consensus        13 lG~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~-----------~~~~~~~~~~-~~----~~~~--~~d~vi~SPGi   74 (93)
T d2jfga1          13 LGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-----------EAVERHTGSL-ND----EWLM--AADLIVASPGI   74 (93)
T ss_dssp             CSHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSC-----------TTSCEEESBC-CH----HHHH--HCSEEEECTTS
T ss_pred             ECHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHh-----------hccceeeccc-ch----hhhc--cCCEEEECCCC
Confidence            477899999999999999999998765422 1121           3444444443 22    2344  78999988886


Q ss_pred             Ccc
Q 021331           83 EAD   85 (314)
Q Consensus        83 ~~~   85 (314)
                      ...
T Consensus        75 ~~~   77 (93)
T d2jfga1          75 ALA   77 (93)
T ss_dssp             CTT
T ss_pred             CCC
Confidence            544

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=92.70  E-value=0.016  Score=40.17  Aligned_cols=66  Identities=17%  Similarity=0.075  Sum_probs=48.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |-|-+|..+++.|.  +++|++++.++.......           ..++.++.+|.++++.+.++- -.+++.+|-+...
T Consensus         7 G~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~-----------~~~~~~i~Gd~~~~~~L~~a~-i~~A~~vi~~~~~   72 (129)
T d2fy8a1           7 GWSESTLECLRELR--GSEVFVLAEDENVRKKVL-----------RSGANFVHGDPTRVSDLEKAN-VRGARAVIVNLES   72 (129)
T ss_dssp             SCCHHHHHHHHTSC--GGGEEEEESCTTHHHHHH-----------HTTCEEEESCTTSHHHHHHTT-CTTCSEEEECCSS
T ss_pred             CCCHHHHHHHHHHc--CCCCEEEEcchHHHHHHH-----------hcCccccccccCCHHHHHHhh-hhcCcEEEEeccc
Confidence            45889999999984  567888888776532211           268899999999999888753 2368888866543

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=92.08  E-value=0.025  Score=39.95  Aligned_cols=69  Identities=14%  Similarity=0.150  Sum_probs=41.7

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcc-cccCCCCCCchhhhh---ccCceEEEEecCCChhhHHHhhhcCCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP-IAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAKGFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~D~~d~~~l~~~~~~~~~d   74 (314)
                      +||+|.+|+.++-.|..++  .+++.++..... ......    ..+.+   +.....+..+|+   +    .+.  ++|
T Consensus         6 iGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a----~Dl~~~~~~~~~~~i~~~~~---~----~~~--~aD   72 (142)
T d1o6za1           6 VGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQA----ADTNHGIAYDSNTRVRQGGY---E----DTA--GSD   72 (142)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHH----HHHHHHHTTTCCCEEEECCG---G----GGT--TCS
T ss_pred             ECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceee----cchhhcccccCCceEeeCCH---H----Hhh--hcC
Confidence            4889999999999999997  478888854321 110000    01111   123444444443   2    244  899


Q ss_pred             EEEEcCCC
Q 021331           75 VVYDINGR   82 (314)
Q Consensus        75 ~vi~~a~~   82 (314)
                      +||-+||.
T Consensus        73 iVvitaG~   80 (142)
T d1o6za1          73 VVVITAGI   80 (142)
T ss_dssp             EEEECCCC
T ss_pred             EEEEeccc
Confidence            99999885

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=92.00  E-value=0.03  Score=41.09  Aligned_cols=30  Identities=23%  Similarity=0.414  Sum_probs=27.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~   32 (314)
                      |.|.+|.++++.|+++||+|++.+|++++.
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~   37 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKS   37 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            579999999999999999999999987764

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=91.94  E-value=0.18  Score=36.64  Aligned_cols=89  Identities=12%  Similarity=0.105  Sum_probs=54.3

Q ss_pred             cccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCC----hhhHHHhhhcCCccEEE
Q 021331            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----YDFVKSSLSAKGFDVVY   77 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d----~~~l~~~~~~~~~d~vi   77 (314)
                      |.|.+|...++.+...| .+|+++++++++...-..           -+...+. |..+    .+.+.+.....++|++|
T Consensus        37 G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-----------~GA~~~i-n~~~~~~~~~~~~~~~~g~G~d~vi  104 (176)
T d1d1ta2          37 GLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-----------VGATECI-SPKDSTKPISEVLSEMTGNNVGYTF  104 (176)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-----------HTCSEEE-CGGGCSSCHHHHHHHHHTSCCCEEE
T ss_pred             CCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-----------cCCcEEE-CccccchHHHHHHHHhccccceEEE
Confidence            46999999999999998 589999998877431111           1222221 2222    23344444445899999


Q ss_pred             EcCCCCcccHHHHHHhCC-CCCcEEEEe
Q 021331           78 DINGREADEVEPILDALP-NLEQFIYCS  104 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~-~~~~~i~~S  104 (314)
                      .+.+..... ...+..+. +..++|.++
T Consensus       105 ~~~g~~~~~-~~a~~~~~~~~G~~v~vG  131 (176)
T d1d1ta2         105 EVIGHLETM-IDALASCHMNYGTSVVVG  131 (176)
T ss_dssp             ECSCCHHHH-HHHHTTSCTTTCEEEECS
T ss_pred             EeCCchHHH-HHHHHHhhcCCeEEEEEE
Confidence            998853332 23333444 546777655

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=91.81  E-value=0.042  Score=40.90  Aligned_cols=84  Identities=14%  Similarity=0.035  Sum_probs=54.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.||+.+++.|...|.+|.+.++..........                  ......+++++++.  .+|+|+.+...
T Consensus        54 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~------------------~~~~~~~~l~~ll~--~sD~v~l~~pl  113 (191)
T d1gdha1          54 GFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS------------------YQATFHDSLDSLLS--VSQFFSLNAPS  113 (191)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH------------------HTCEECSSHHHHHH--HCSEEEECCCC
T ss_pred             ecccchHHHHHHHHhhccccccccccccccchhhc------------------ccccccCCHHHHHh--hCCeEEecCCC
Confidence            56999999999999999999998876543210000                  01112345788888  88998766544


Q ss_pred             Cc----ccHHHHHHhCCCCCcEEEEeec
Q 021331           83 EA----DEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        83 ~~----~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      +.    .-....++.|+....||.+|=.
T Consensus       114 t~~T~~li~~~~l~~mk~~a~lIN~sRG  141 (191)
T d1gdha1         114 TPETRYFFNKATIKSLPQGAIVVNTARG  141 (191)
T ss_dssp             CTTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             CchHhheecHHHhhCcCCccEEEecCCc
Confidence            32    1235677777765566655543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=91.67  E-value=0.12  Score=35.11  Aligned_cols=30  Identities=23%  Similarity=0.287  Sum_probs=27.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~   32 (314)
                      |+|++|..++..|.+.|.+|+++.+.+...
T Consensus        37 GgG~iG~E~A~~l~~~g~~Vtli~~~~~~l   66 (121)
T d1d7ya2          37 GGGVIGLELAATARTAGVHVSLVETQPRLM   66 (121)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred             CcchhHHHHHHHhhcccceEEEEeeccccc
Confidence            569999999999999999999999887653

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=91.64  E-value=0.1  Score=38.17  Aligned_cols=26  Identities=19%  Similarity=0.358  Sum_probs=21.7

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFT   26 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~   26 (314)
                      .||||++|..|++.|.+.. .++..+.
T Consensus         7 iGATGyvG~eLlrlL~~HP~~ei~~l~   33 (179)
T d2g17a1           7 VGASGYAGAELVSYVNRHPHMTITALT   33 (179)
T ss_dssp             ETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             ECcccHHHHHHHHHHHhCCCCceEeeE
Confidence            4999999999999999984 6776554

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=91.57  E-value=0.079  Score=38.33  Aligned_cols=91  Identities=13%  Similarity=0.134  Sum_probs=53.5

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhh---cCCccEE
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS---AKGFDVV   76 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~---~~~~d~v   76 (314)
                      +|++|.+|...++.+...| .+|+++++++.+... .        .+  -+... ..|..+.+..++..+   ..++|++
T Consensus        34 ~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~-~--------~~--~Ga~~-~i~~~~~~~~~~~~~~~~~~~~d~v  101 (170)
T d1jvba2          34 VGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEA-A--------KR--AGADY-VINASMQDPLAEIRRITESKGVDAV  101 (170)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHH-H--------HH--HTCSE-EEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred             EeccccceeeeeecccccccccccccccchhhHHH-H--------HH--cCCce-eeccCCcCHHHHHHHHhhcccchhh
Confidence            4788999999999999888 588888887655321 1        11  12221 234444444444333   2369999


Q ss_pred             EEcCCCCcccHHHHHHhCCCCCcEEEEe
Q 021331           77 YDINGREADEVEPILDALPNLEQFIYCS  104 (314)
Q Consensus        77 i~~a~~~~~~~~~~~~~~~~~~~~i~~S  104 (314)
                      |.+++.. ......++.++...+++.++
T Consensus       102 id~~g~~-~~~~~a~~~l~~~G~iv~~G  128 (170)
T d1jvba2         102 IDLNNSE-KTLSVYPKALAKQGKYVMVG  128 (170)
T ss_dssp             EESCCCH-HHHTTGGGGEEEEEEEEECC
T ss_pred             hcccccc-hHHHhhhhhcccCCEEEEec
Confidence            9998742 11223344455445677654

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=91.56  E-value=0.08  Score=37.37  Aligned_cols=66  Identities=14%  Similarity=0.208  Sum_probs=41.9

Q ss_pred             CcccccHHHHHHHHHHCC--CeEEEEEcCCcccccCCCCCCchhhhh---ccCceEEEEecCCChhhHHHhhhcCCccEE
Q 021331            2 GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~d~~~l~~~~~~~~~d~v   76 (314)
                      | +|++|..++..|+.+|  .+|+.++++.........     .+.+   ......+..+|+   +    .+.  ++|+|
T Consensus        12 G-aG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~-----Dl~~a~~~~~~~~~~~~d~---~----~~~--~adiv   76 (146)
T d1ez4a1          12 G-DGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDAL-----DLEDAQAFTAPKKIYSGEY---S----DCK--DADLV   76 (146)
T ss_dssp             C-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHH-----HHHGGGGGSCCCEEEECCG---G----GGT--TCSEE
T ss_pred             C-CCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHH-----HHhccccccCCceEeeccH---H----Hhc--cccEE
Confidence            6 5999999999999987  689999987654211000     1111   112234444443   2    244  89999


Q ss_pred             EEcCCC
Q 021331           77 YDINGR   82 (314)
Q Consensus        77 i~~a~~   82 (314)
                      |.++|.
T Consensus        77 vitag~   82 (146)
T d1ez4a1          77 VITAGA   82 (146)
T ss_dssp             EECCCC
T ss_pred             EEeccc
Confidence            999886

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.50  E-value=0.026  Score=40.18  Aligned_cols=68  Identities=18%  Similarity=0.294  Sum_probs=42.4

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcccccCCCCCCchhhhh----ccCceEEEEecCCChhhHHHhhhcCCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAE----FSSKILHLKGDRKDYDFVKSSLSAKGFD   74 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~d~~~l~~~~~~~~~d   74 (314)
                      +|+ |.+|+.++-.|+.++  .+++.++++++.......     .+.+    ....+.+...|+       +.+.  ++|
T Consensus        12 iGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~-----Dl~~~~~~~~~~~~~~~~d~-------~~l~--daD   76 (148)
T d1ldna1          12 IGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAM-----DFNHGKVFAPKPVDIWHGDY-------DDCR--DAD   76 (148)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHH-----HHHHHTTSSSSCCEEEECCG-------GGTT--TCS
T ss_pred             ECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhc-----cHhhCccccCCCeEEEECCH-------HHhc--cce
Confidence            365 999999999999987  489999987654211000     1111    012344433333       3355  899


Q ss_pred             EEEEcCCCC
Q 021331           75 VVYDINGRE   83 (314)
Q Consensus        75 ~vi~~a~~~   83 (314)
                      +||.++|..
T Consensus        77 vvvitag~~   85 (148)
T d1ldna1          77 LVVICAGAN   85 (148)
T ss_dssp             EEEECCSCC
T ss_pred             eEEEecccc
Confidence            999998863

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=91.40  E-value=0.16  Score=35.65  Aligned_cols=29  Identities=24%  Similarity=0.368  Sum_probs=22.9

Q ss_pred             CCcccccHHHHHHHHHHC-C--CeEEEEEcCC
Q 021331            1 MGGTRFIGVFLSRLLVKE-G--HQVTLFTRGK   29 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g--~~V~~~~r~~   29 (314)
                      +|++|.+|++++-.|..+ +  .++..++..+
T Consensus         6 iGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~   37 (145)
T d2cmda1           6 LGAAGGIGQALALLLKTQLPSGSELSLYDIAP   37 (145)
T ss_dssp             ETTTSHHHHHHHHHHHHHSCTTCEEEEECSST
T ss_pred             EcCCChHHHHHHHHHHhCCCCCcEEEEecccc
Confidence            488999999999887543 4  7888888754

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=91.13  E-value=0.051  Score=39.55  Aligned_cols=91  Identities=16%  Similarity=0.146  Sum_probs=51.6

Q ss_pred             cccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |+|.+|...++.+...| ..|+++++++.+... ..        + .....++..+-.+.+...+.....++|+||.++|
T Consensus        40 GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~-~~--------~-~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g  109 (172)
T d1h2ba2          40 GVGGLGHIAVQLLKVMTPATVIALDVKEEKLKL-AE--------R-LGADHVVDARRDPVKQVMELTRGRGVNVAMDFVG  109 (172)
T ss_dssp             CCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHH-HH--------H-TTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred             CCChHHHHHHHHHHhhcCcccccccchhHHHHH-Hh--------h-cccceeecCcccHHHHHHHhhCCCCceEEEEecC
Confidence            46999999999998887 466777777654321 10        0 1222333222112233334333346999999998


Q ss_pred             CCcccHHHHHHhCCCCCcEEEEe
Q 021331           82 READEVEPILDALPNLEQFIYCS  104 (314)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~i~~S  104 (314)
                      ... .....++.++...+++.++
T Consensus       110 ~~~-~~~~a~~~l~~~G~iv~~G  131 (172)
T d1h2ba2         110 SQA-TVDYTPYLLGRMGRLIIVG  131 (172)
T ss_dssp             CHH-HHHHGGGGEEEEEEEEECC
T ss_pred             cch-HHHHHHHHHhCCCEEEEEe
Confidence            532 2334455555445777654

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=91.12  E-value=0.067  Score=39.61  Aligned_cols=84  Identities=12%  Similarity=-0.027  Sum_probs=52.4

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|+.+++.|..-|.+|.+.++..........           .       .+....++.++++  .+|+|+.+...
T Consensus        51 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-----------~-------~~~~~~~l~~~l~--~sD~v~~~~pl  110 (188)
T d2naca1          51 AAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE-----------L-------NLTWHATREDMYP--VCDVVTLNCPL  110 (188)
T ss_dssp             CCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH-----------H-------TCEECSSHHHHGG--GCSEEEECSCC
T ss_pred             cccccchhhhhhhhccCceEEEEeecccccccccc-----------c-------cccccCCHHHHHH--hccchhhcccc
Confidence            67999999999999999999999987543210000           0       1122345677787  88888765443


Q ss_pred             Cc----ccHHHHHHhCCCCCcEEEEeec
Q 021331           83 EA----DEVEPILDALPNLEQFIYCSSA  106 (314)
Q Consensus        83 ~~----~~~~~~~~~~~~~~~~i~~Ss~  106 (314)
                      +.    .-....+..|+....||.+|=.
T Consensus       111 t~~T~~li~~~~l~~mk~ga~lIN~aRG  138 (188)
T d2naca1         111 HPETEHMINDETLKLFKRGAYIVNTARG  138 (188)
T ss_dssp             CTTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             cccchhhhHHHHHHhCCCCCEEEecCch
Confidence            22    1234566666655555655443

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.08  E-value=0.081  Score=39.62  Aligned_cols=29  Identities=21%  Similarity=0.354  Sum_probs=26.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |.|++|..++..|++.||+|++++.++..
T Consensus         7 GlG~vGl~~a~~la~~g~~V~g~D~n~~~   35 (202)
T d1mv8a2           7 GLGYVGAVCAGCLSARGHEVIGVDVSSTK   35 (202)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCHhHHHHHHHHHhCCCcEEEEeCCHHH
Confidence            67999999999999999999999987654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.02  E-value=0.08  Score=39.02  Aligned_cols=80  Identities=13%  Similarity=0.073  Sum_probs=51.7

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|+.+++.|..-|.+|++.++...+....            ..++        ...+++++++  .+|+|+.+...
T Consensus        51 G~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~------------~~~~--------~~~~l~ell~--~sDiv~~~~Pl  108 (184)
T d1ygya1          51 GLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAA------------QLGI--------ELLSLDDLLA--RADFISVHLPK  108 (184)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECTTSCHHHHH------------HHTC--------EECCHHHHHH--HCSEEEECCCC
T ss_pred             cccchhHHHHHHhhhccceEEeecCCCChhHHh------------hcCc--------eeccHHHHHh--hCCEEEEcCCC
Confidence            679999999999999999999998776542100            0111        1234678888  89998866544


Q ss_pred             Ccc----cHHHHHHhCCCCCcEEEEe
Q 021331           83 EAD----EVEPILDALPNLEQFIYCS  104 (314)
Q Consensus        83 ~~~----~~~~~~~~~~~~~~~i~~S  104 (314)
                      +..    -....+..|+....+|.+|
T Consensus       109 t~~T~~lin~~~l~~mk~~a~lIN~s  134 (184)
T d1ygya1         109 TPETAGLIDKEALAKTKPGVIIVNAA  134 (184)
T ss_dssp             STTTTTCBCHHHHTTSCTTEEEEECS
T ss_pred             CchhhhhhhHHHHhhhCCCceEEEec
Confidence            321    2345666666555566544

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=90.91  E-value=0.23  Score=33.74  Aligned_cols=64  Identities=17%  Similarity=0.168  Sum_probs=49.4

Q ss_pred             ccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            6 FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         6 ~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      +.+.+.++.|.+.|++++.+..+++......            .-..-++....+.+.+.+++..+++|.|+-..|
T Consensus        28 y~~~~a~~alke~g~~~iliN~NP~TVstd~------------d~aD~lYfePlt~e~v~~Ii~~E~pd~il~~~G   91 (127)
T d1a9xa3          28 YSGAQACKALREEGYRVINVNSNPATIMTDP------------EMADATYIEPIHWEVVRKIIEKERPDAVLPTMG   91 (127)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECSCTTCGGGCG------------GGSSEEECSCCCHHHHHHHHHHHCCSEEECSSS
T ss_pred             HHHHHHHHHHHHcCCeEEEecCchHhhhcCh------------hhcceeeeecCCHHHHHHHHHHhCcCCeEEEee
Confidence            5678899999999999999988887642111            223445677778899999999899999986655

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=90.84  E-value=0.16  Score=34.55  Aligned_cols=29  Identities=28%  Similarity=0.512  Sum_probs=26.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |.|++|..++..|.+.|.+|+++.+.+..
T Consensus        37 GgG~iG~E~A~~l~~~g~~Vtlie~~~~~   65 (123)
T d1nhpa2          37 GSGYIGIEAAEAFAKAGKKVTVIDILDRP   65 (123)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CChHHHHHHHHHhhccceEEEEEEecCcc
Confidence            56999999999999999999999987654

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.82  E-value=0.063  Score=36.63  Aligned_cols=29  Identities=21%  Similarity=0.297  Sum_probs=26.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |+|++|..++..|.+.|.+|+++.+.+..
T Consensus        30 G~G~ig~E~A~~l~~lG~~Vtii~~~~~~   58 (122)
T d1v59a2          30 GGGIIGLEMGSVYSRLGSKVTVVEFQPQI   58 (122)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCCchHHHHHHHHHhhCcceeEEEecccc
Confidence            46999999999999999999999987655

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.80  E-value=0.14  Score=36.30  Aligned_cols=56  Identities=20%  Similarity=0.164  Sum_probs=41.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      +.||+|..+++.|.+.|.+|+++.+......                     ..|-.....+.+.+.+.++++..+.
T Consensus        48 ggg~ig~e~A~~la~~G~~Vtlv~~~~~~~~---------------------~~~~~~~~~~~~~l~~~GV~i~~~~  103 (156)
T d1djqa2          48 DTYFMAPSLAEKLATAGHEVTIVSGVHLANY---------------------MHFTLEYPNMMRRLHELHVEELGDH  103 (156)
T ss_dssp             CCSSHHHHHHHHHHHTTCEEEEEESSCTTTH---------------------HHHTTCHHHHHHHHHHTTCEEEETE
T ss_pred             CCChHHHHHHHHHHHcCCeEEEEecCCcccc---------------------ccchhHHHHHHHHHhhccceEEecc
Confidence            5699999999999999999999998754321                     1244455666777766677766654

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=90.72  E-value=0.38  Score=32.27  Aligned_cols=64  Identities=13%  Similarity=0.044  Sum_probs=48.5

Q ss_pred             ccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            6 FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         6 ~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      +.+.+.++.|.+.|++++.+..+++...-..            .-..-++......+.+.+++..+++|.|+-..|
T Consensus        25 y~~~~a~~aLk~~g~~~IliN~NPeTVstd~------------d~aD~lYfeplt~e~v~~Ii~~E~p~~ii~~~G   88 (121)
T d1a9xa4          25 YCCVHASLALREDGYETIMVNCNPETVSTDY------------DTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYG   88 (121)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECCCTTSSTTST------------TSSSEEECCCCSHHHHHHHHHHHCCSEEECSSS
T ss_pred             HHHHHHHHHHHhcCCeEEEEecChhhhhcCh------------hhcCceEEccCCHHHHHHHHHHhCCCEEEeehh
Confidence            5678999999999999999988887643211            223345666778899999998889999986554

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=90.23  E-value=0.021  Score=40.32  Aligned_cols=68  Identities=19%  Similarity=0.317  Sum_probs=39.3

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcccccCCCCCCchhhhh---ccCceEEEEecCCChhhHHHhhhcCCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAKGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~d~~~l~~~~~~~~~d~   75 (314)
                      +|+ |.+|..++-.|+.++  .+++.++++.+.......     ++.+   +........+|   .    +.+.  ++|+
T Consensus         7 IGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~-----Dl~~~~~~~~~~~~~~~~---~----~~~~--~adi   71 (142)
T d1y6ja1           7 IGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAM-----DINHGLPFMGQMSLYAGD---Y----SDVK--DCDV   71 (142)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHH-----HHTTSCCCTTCEEEC--C---G----GGGT--TCSE
T ss_pred             ECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeee-----eeccCcccCCCeeEeeCc---H----HHhC--CCce
Confidence            365 999999999999987  489999988765321110     1111   11223322222   2    2355  8999


Q ss_pred             EEEcCCCC
Q 021331           76 VYDINGRE   83 (314)
Q Consensus        76 vi~~a~~~   83 (314)
                      |+-++|..
T Consensus        72 vvitag~~   79 (142)
T d1y6ja1          72 IVVTAGAN   79 (142)
T ss_dssp             EEECCCC-
T ss_pred             EEEecccc
Confidence            99998864

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.13  E-value=0.12  Score=37.07  Aligned_cols=89  Identities=10%  Similarity=-0.017  Sum_probs=51.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhh-cCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS-AKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~-~~~~d~vi~~a~   81 (314)
                      |+|.+|...++.+...|.+|+++++++.+.....         +  -+...+ .|..+.+..+...+ ..+.+.+|.+++
T Consensus        35 GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~---------~--~Ga~~~-i~~~~~~~~~~~~~~~~g~~~~i~~~~  102 (166)
T d1llua2          35 GIGGLGHVAVQYARAMGLHVAAIDIDDAKLELAR---------K--LGASLT-VNARQEDPVEAIQRDIGGAHGVLVTAV  102 (166)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---------H--TTCSEE-EETTTSCHHHHHHHHHSSEEEEEECCS
T ss_pred             eccccHHHHHHHHHHcCCccceecchhhHHHhhh---------c--cCcccc-ccccchhHHHHHHHhhcCCcccccccc
Confidence            4599999999999888999999998876632111         1  122211 34544443333222 125666666655


Q ss_pred             CCcccHHHHHHhCCCCCcEEEEe
Q 021331           82 READEVEPILDALPNLEQFIYCS  104 (314)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~i~~S  104 (314)
                      .. ......++.++...+++.++
T Consensus       103 ~~-~~~~~~~~~l~~~G~iv~~G  124 (166)
T d1llua2         103 SN-SAFGQAIGMARRGGTIALVG  124 (166)
T ss_dssp             CH-HHHHHHHTTEEEEEEEEECC
T ss_pred             cc-hHHHHHHHHhcCCcEEEEEE
Confidence            42 33444555555445666543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.73  E-value=0.12  Score=34.70  Aligned_cols=29  Identities=24%  Similarity=0.387  Sum_probs=26.2

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |.|++|..+|..|.+.|.+|+++.|.+.-
T Consensus        29 GgG~ig~E~A~~l~~~G~~Vtlve~~~~i   57 (117)
T d1ebda2          29 GGGYIGIELGTAYANFGTKVTILEGAGEI   57 (117)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCCccceeeeeeecccccEEEEEEeccee
Confidence            56999999999999999999999988754

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=89.43  E-value=0.11  Score=37.31  Aligned_cols=89  Identities=10%  Similarity=0.128  Sum_probs=62.8

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhc-cCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |.|-.|..-++.+...|.+|++++.+.+...         .++.. ...+   ..-..+++.+.+.+.  ++|+||.++-
T Consensus        39 GaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~---------~l~~~~~~~~---~~~~~~~~~l~~~~~--~aDivI~aal  104 (168)
T d1pjca1          39 GGGVVGTEAAKMAVGLGAQVQIFDINVERLS---------YLETLFGSRV---ELLYSNSAEIETAVA--EADLLIGAVL  104 (168)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------HHHHHHGGGS---EEEECCHHHHHHHHH--TCSEEEECCC
T ss_pred             CCChHHHHHHHHHhhCCCEEEEEeCcHHHHH---------HHHHhhcccc---eeehhhhhhHHHhhc--cCcEEEEeee
Confidence            4588999999999999999999999876632         11111 1223   333557788999998  9999999875


Q ss_pred             CC-----cccHHHHHHhCCCCCcEEEEee
Q 021331           82 RE-----ADEVEPILDALPNLEQFIYCSS  105 (314)
Q Consensus        82 ~~-----~~~~~~~~~~~~~~~~~i~~Ss  105 (314)
                      ..     ..-++.+++.|+...-+|=++.
T Consensus       105 ipG~~aP~lIt~~mv~~Mk~GSVIVDvai  133 (168)
T d1pjca1         105 VPGRRAPILVPASLVEQMRTGSVIVDVAV  133 (168)
T ss_dssp             CTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred             cCCcccCeeecHHHHhhcCCCcEEEEeec
Confidence            42     2347889999995555554443

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=89.19  E-value=0.11  Score=37.74  Aligned_cols=89  Identities=13%  Similarity=0.101  Sum_probs=50.5

Q ss_pred             CcccccHHHHHHHHHHCCCeEE-EEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhh--cCCccEEEE
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVT-LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS--AKGFDVVYD   78 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~--~~~~d~vi~   78 (314)
                      |+ |.+|...++.+...|..++ ++++++.+.. ..        .++ .-.++  .|..+++..+++.+  .-++|+||.
T Consensus        36 G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~-~a--------~~~-Ga~~~--i~~~~~~~~~~i~~~t~gg~D~vid  102 (174)
T d1f8fa2          36 GA-GAVGLSALLAAKVCGASIIIAVDIVESRLE-LA--------KQL-GATHV--INSKTQDPVAAIKEITDGGVNFALE  102 (174)
T ss_dssp             SC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHH-HH--------HHH-TCSEE--EETTTSCHHHHHHHHTTSCEEEEEE
T ss_pred             CC-CHHHhhhhhcccccccceeeeeccHHHHHH-HH--------HHc-CCeEE--EeCCCcCHHHHHHHHcCCCCcEEEE
Confidence            54 9999999999988887554 5555554422 11        111 11233  35555443333221  236999999


Q ss_pred             cCCCCcccHHHHHHhCCCCCcEEEEe
Q 021331           79 INGREADEVEPILDALPNLEQFIYCS  104 (314)
Q Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~i~~S  104 (314)
                      +.|.. ......++.++...+++.++
T Consensus       103 ~~G~~-~~~~~~~~~~~~~G~i~~~G  127 (174)
T d1f8fa2         103 STGSP-EILKQGVDALGILGKIAVVG  127 (174)
T ss_dssp             CSCCH-HHHHHHHHTEEEEEEEEECC
T ss_pred             cCCcH-HHHHHHHhcccCceEEEEEe
Confidence            98843 22344556666445777654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=88.60  E-value=0.14  Score=38.17  Aligned_cols=65  Identities=15%  Similarity=0.125  Sum_probs=42.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|+++++.|.+.|.+|++.+.+........           ..+.+.+     +.   ++++ ..++|+++-||..
T Consensus        34 G~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~-----------~~g~~~~-----~~---~~~~-~~~~DI~iPcA~~   93 (201)
T d1c1da1          34 GLGAVGGSLASLAAEAGAQLLVADTDTERVAHAV-----------ALGHTAV-----AL---EDVL-STPCDVFAPCAMG   93 (201)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTCEEC-----CG---GGGG-GCCCSEEEECSCS
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH-----------hhccccc-----Cc---cccc-cccceeeeccccc
Confidence            5799999999999999999998887654422111           0122211     22   2344 2489999999876


Q ss_pred             CcccH
Q 021331           83 EADEV   87 (314)
Q Consensus        83 ~~~~~   87 (314)
                      +....
T Consensus        94 ~~I~~   98 (201)
T d1c1da1          94 GVITT   98 (201)
T ss_dssp             CCBCH
T ss_pred             ccccH
Confidence            65533

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=88.50  E-value=0.47  Score=35.25  Aligned_cols=90  Identities=16%  Similarity=0.144  Sum_probs=48.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccc-cCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |++..|..+++.|.+.|++|.++.-.+++.. ..... ....+.. ..++.++..+-.+.+.+.+.+++.++|.+|.+..
T Consensus         7 ~~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~-~~~~~a~-~~~i~~~~~~~~~~~~~~~~i~~~~~Dlii~~g~   84 (203)
T d2blna2           7 AYHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYG-SVARLAA-ERGIPVYAPDNVNHPLWVERIAQLSPDVIFSFYY   84 (203)
T ss_dssp             ECHHHHHHHHHHHHHTTCEEEEEECCCC------CCC-CHHHHHH-HHTCCEECCSCCCSHHHHHHHHHTCCSEEEEESC
T ss_pred             ecCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccC-HHHHHHH-HcCCcceecccccchhhhhhhhhhcccceeeeec
Confidence            3456899999999999999987664333211 11111 0011111 1345555543333344556666678998886653


Q ss_pred             CCcccHHHHHHhCC
Q 021331           82 READEVEPILDALP   95 (314)
Q Consensus        82 ~~~~~~~~~~~~~~   95 (314)
                      . ..-...+++..+
T Consensus        85 ~-~ii~~~il~~~~   97 (203)
T d2blna2          85 R-HLIYDEILQLAP   97 (203)
T ss_dssp             C-SCCCHHHHTTCT
T ss_pred             c-cchhcccchhhH
Confidence            2 222345555544

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=88.34  E-value=0.13  Score=36.56  Aligned_cols=28  Identities=14%  Similarity=0.186  Sum_probs=22.7

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |.|.+|..+++.|++.|+.| +..|+.++
T Consensus         7 GlG~MG~~ma~~L~~~g~~~-~~~~~~~~   34 (156)
T d2cvza2           7 GLGAMGYPMAGHLARRFPTL-VWNRTFEK   34 (156)
T ss_dssp             CCSTTHHHHHHHHHTTSCEE-EECSSTHH
T ss_pred             eHHHHHHHHHHHHHhCCCEE-EEeCCHHH
Confidence            56999999999999988865 46676655

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=88.20  E-value=0.094  Score=38.70  Aligned_cols=29  Identities=10%  Similarity=0.138  Sum_probs=26.3

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |+|.+|..++..++..|++|++.+++++.
T Consensus        11 GaG~mG~~iA~~~a~~G~~V~l~D~~~~~   39 (186)
T d1wdka3          11 GAGIMGGGIAYQSASKGTPILMKDINEHG   39 (186)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred             CcCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            45999999999999999999999998764

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=88.16  E-value=0.34  Score=32.17  Aligned_cols=85  Identities=14%  Similarity=0.112  Sum_probs=52.8

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|.+-++.|++.|.+|++++....+....+..         ..++.++...+.+.     -+.  +.+.|+.+.+ 
T Consensus        19 G~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~---------~~~i~~~~~~~~~~-----dl~--~~~lv~~at~-   81 (113)
T d1pjqa1          19 GGGDVAERKARLLLEAGARLTVNALTFIPQFTVWAN---------EGMLTLVEGPFDET-----LLD--SCWLAIAATD-   81 (113)
T ss_dssp             CCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT---------TTSCEEEESSCCGG-----GGT--TCSEEEECCS-
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh---------cCCceeeccCCCHH-----HhC--CCcEEeecCC-
Confidence            459999999999999999999998766543211110         24577776666432     234  6787775543 


Q ss_pred             CcccHHHHHHhCCCCCcEEEEe
Q 021331           83 EADEVEPILDALPNLEQFIYCS  104 (314)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~i~~S  104 (314)
                      +..-...+...|+....+|.+.
T Consensus        82 d~~~n~~i~~~a~~~~ilVNv~  103 (113)
T d1pjqa1          82 DDTVNQRVSDAAESRRIFCNVV  103 (113)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEET
T ss_pred             CHHHHHHHHHHHHHcCCEEEeC
Confidence            3333345666666434455543

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=87.96  E-value=0.014  Score=41.73  Aligned_cols=81  Identities=14%  Similarity=0.099  Sum_probs=40.9

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |+|.+|+++++.|.+.++.+.+.+|++++......         ... .     ...+   ..++.+  ..|+||-+...
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~---------~~~-~-----~~~~---~~~~~~--~~DiVil~v~d   65 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAE---------VYG-G-----KAAT---LEKHPE--LNGVVFVIVPD   65 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHH---------HTC-C-----CCCS---SCCCCC-----CEEECSCT
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhh---------ccc-c-----cccc---hhhhhc--cCcEEEEeccc
Confidence            67999999999886544434577787765321111         101 0     1112   224455  78999977653


Q ss_pred             CcccHHHHHHhCC-CCCcEEEEee
Q 021331           83 EADEVEPILDALP-NLEQFIYCSS  105 (314)
Q Consensus        83 ~~~~~~~~~~~~~-~~~~~i~~Ss  105 (314)
                        .....++..+. ..+-+|.+|+
T Consensus        66 --~~i~~v~~~l~~~~~ivi~~s~   87 (153)
T d2i76a2          66 --RYIKTVANHLNLGDAVLVHCSG   87 (153)
T ss_dssp             --TTHHHHHTTTCCSSCCEEECCS
T ss_pred             --hhhhHHHhhhcccceeeeeccc
Confidence              34455666665 3344455443

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=87.88  E-value=0.11  Score=37.89  Aligned_cols=18  Identities=22%  Similarity=0.169  Sum_probs=16.3

Q ss_pred             CCcccccHHHHHHHHHHC
Q 021331            1 MGGTRFIGVFLSRLLVKE   18 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~   18 (314)
                      +||+|.+|++++-.|++.
T Consensus        30 ~GA~G~Ig~~l~~~La~g   47 (175)
T d7mdha1          30 SGAAGMISNHLLFKLASG   47 (175)
T ss_dssp             ETTTSHHHHHHHHHHHHT
T ss_pred             ECCCcHHHHHHHHHHHcC
Confidence            699999999999999875

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=87.72  E-value=0.1  Score=37.02  Aligned_cols=30  Identities=23%  Similarity=0.313  Sum_probs=26.2

Q ss_pred             cccccHHHHHHHHHHCC-CeEEEEEcCCccc
Q 021331            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPI   32 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~~~r~~~~~   32 (314)
                      |+|.+|.++++.|++.| ++|++.+|+++..
T Consensus         7 G~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~   37 (152)
T d1yqga2           7 GGGNMAAAVAGGLVKQGGYRIYIANRGAEKR   37 (152)
T ss_dssp             CCSHHHHHHHHHHHHHCSCEEEEECSSHHHH
T ss_pred             cCcHHHHHHHHHHHHCCCCcEEEEeCChhHH
Confidence            56999999999999887 9999999987653

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=87.36  E-value=0.53  Score=33.75  Aligned_cols=76  Identities=13%  Similarity=0.186  Sum_probs=45.8

Q ss_pred             cccccHHHHHHHHHHC-CCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         3 atG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |+|.+|+.+++.|.+. +.+++++........               .......     ..+...+..  ++|+|+.+.+
T Consensus        10 G~G~ig~~~~~~l~~~~~~elvav~~~~~~~~---------------~~~~~~~-----~~~~~~~~~--~~D~Vvi~tp   67 (170)
T d1f06a1          10 GYGNLGRSVEKLIAKQPDMDLVGIFSRRATLD---------------TKTPVFD-----VADVDKHAD--DVDVLFLCMG   67 (170)
T ss_dssp             CCSHHHHHHHHHHTTCSSEEEEEEEESSSCCS---------------SSSCEEE-----GGGGGGTTT--TCSEEEECSC
T ss_pred             CChHHHHHHHHHHHhCCCcEEEEEEecccccc---------------ccccccc-----chhhhhhcc--ccceEEEeCC
Confidence            5799999999999876 578877654433311               1111111     122334445  8999997766


Q ss_pred             CCcccHHHHHHhCCCCCcEE
Q 021331           82 READEVEPILDALPNLEQFI  101 (314)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~i  101 (314)
                      .. .+..-+..+++..+++|
T Consensus        68 ~~-~h~~~a~~aL~aG~~vv   86 (170)
T d1f06a1          68 SA-TDIPEQAPKFAQFACTV   86 (170)
T ss_dssp             TT-THHHHHHHHHTTTSEEE
T ss_pred             Cc-ccHHHHHHHHHCCCcEE
Confidence            54 34555666666555665

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=87.12  E-value=0.29  Score=34.97  Aligned_cols=86  Identities=9%  Similarity=0.066  Sum_probs=52.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh---hhHHHhhhcCCccEEEEc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~l~~~~~~~~~d~vi~~   79 (314)
                      |+|.+|...++.+...|.+|+++++++++... .+          .-+...+. |..+.   +.+.+...  +.+.+|.+
T Consensus        35 G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~-~k----------~~Ga~~~~-~~~~~~~~~~~~~~~~--~~~~~v~~  100 (168)
T d1rjwa2          35 GIGGLGHVAVQYAKAMGLNVVAVDIGDEKLEL-AK----------ELGADLVV-NPLKEDAAKFMKEKVG--GVHAAVVT  100 (168)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHH-HH----------HTTCSEEE-CTTTSCHHHHHHHHHS--SEEEEEES
T ss_pred             ecccchhhhhHHHhcCCCeEeccCCCHHHhhh-hh----------hcCcceec-ccccchhhhhcccccC--CCceEEee
Confidence            56999999999999999999999988766321 11          12333332 33332   23333333  66777766


Q ss_pred             CCCCcccHHHHHHhCCCCCcEEEE
Q 021331           80 NGREADEVEPILDALPNLEQFIYC  103 (314)
Q Consensus        80 a~~~~~~~~~~~~~~~~~~~~i~~  103 (314)
                      ++. .......++.++...+++.+
T Consensus       101 ~~~-~~~~~~a~~~l~~~G~i~~~  123 (168)
T d1rjwa2         101 AVS-KPAFQSAYNSIRRGGACVLV  123 (168)
T ss_dssp             SCC-HHHHHHHHHHEEEEEEEEEC
T ss_pred             cCC-HHHHHHHHHHhccCCceEec
Confidence            653 34455666667644566654

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.09  E-value=0.2  Score=35.74  Aligned_cols=74  Identities=8%  Similarity=-0.021  Sum_probs=52.5

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|+.+|+.|...|.+|++....+-...           +....+.        ....+++++.  ..|++|-+.|.
T Consensus        31 GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al-----------~A~~dG~--------~v~~~~~a~~--~adivvtaTGn   89 (163)
T d1li4a1          31 GYGDVGKGCAQALRGFGARVIITEIDPINAL-----------QAAMEGY--------EVTTMDEACQ--EGNIFVTTTGC   89 (163)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHH-----------HHHHTTC--------EECCHHHHTT--TCSEEEECSSC
T ss_pred             ccccccHHHHHHHHhCCCeeEeeecccchhH-----------HhhcCce--------Eeeehhhhhh--hccEEEecCCC
Confidence            6799999999999999999999998864421           1111222        2234667777  89999988886


Q ss_pred             CcccHHHHHHhCCCC
Q 021331           83 EADEVEPILDALPNL   97 (314)
Q Consensus        83 ~~~~~~~~~~~~~~~   97 (314)
                      ...-...-++.|+..
T Consensus        90 ~~vI~~eh~~~MKdg  104 (163)
T d1li4a1          90 IDIILGRHFEQMKDD  104 (163)
T ss_dssp             SCSBCHHHHTTCCTT
T ss_pred             ccchhHHHHHhccCC
Confidence            555566677777743

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=86.54  E-value=0.36  Score=34.81  Aligned_cols=87  Identities=14%  Similarity=0.090  Sum_probs=50.0

Q ss_pred             CcccccHHHHHHHHHHCC-CeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh---hhHHHhhhcCCccEEE
Q 021331            2 GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~l~~~~~~~~~d~vi   77 (314)
                      |+ |.+|...+..+...| .+|+++++++++......           .+......+....   ....+.....++|++|
T Consensus        36 Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-----------~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vi  103 (176)
T d2jhfa2          36 GL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-----------VGATECVNPQDYKKPIQEVLTEMSNGGVDFSF  103 (176)
T ss_dssp             CC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-----------TTCSEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred             CC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-----------hCCeeEEecCCchhHHHHHHHHHhcCCCCEEE
Confidence            55 679999999999997 588888888776431111           2222222222212   2333333334799999


Q ss_pred             EcCCCCcccHHHHHHhCC-CCCcEE
Q 021331           78 DINGREADEVEPILDALP-NLEQFI  101 (314)
Q Consensus        78 ~~a~~~~~~~~~~~~~~~-~~~~~i  101 (314)
                      .+.|... .....+..+. +...++
T Consensus       104 d~~G~~~-~~~~a~~~~~~~~g~~~  127 (176)
T d2jhfa2         104 EVIGRLD-TMVTALSCCQEAYGVSV  127 (176)
T ss_dssp             ECSCCHH-HHHHHHHHBCTTTCEEE
T ss_pred             ecCCchh-HHHHHHHHHhcCCcceE
Confidence            9988532 2334555565 333444

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=86.34  E-value=0.5  Score=34.04  Aligned_cols=88  Identities=13%  Similarity=0.014  Sum_probs=51.7

Q ss_pred             ccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCC--C--hhhHHHhhhcCCccEEEE
Q 021331            4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--D--YDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         4 tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--d--~~~l~~~~~~~~~d~vi~   78 (314)
                      .|.+|...++.+...|. +|++++++.++......           -+...+ .|..  |  .+........-+.|++|.
T Consensus        36 aGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-----------lGa~~~-i~~~~~d~~~~~~~~~~~~~G~d~vid  103 (174)
T d1p0fa2          36 LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-----------LGATEC-LNPKDYDKPIYEVICEKTNGGVDYAVE  103 (174)
T ss_dssp             CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-----------TTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred             CCchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-----------cCCcEE-EcCCCchhHHHHHHHHhcCCCCcEEEE
Confidence            59999999999999985 78888888766421110           122222 2332  2  122333333347999999


Q ss_pred             cCCCCcccHHHHHHhCC-CCCcEEEEe
Q 021331           79 INGREADEVEPILDALP-NLEQFIYCS  104 (314)
Q Consensus        79 ~a~~~~~~~~~~~~~~~-~~~~~i~~S  104 (314)
                      +.+.. ......+..+. +..+++.++
T Consensus       104 ~~g~~-~~~~~~~~~~~~~~G~~v~vG  129 (174)
T d1p0fa2         104 CAGRI-ETMMNALQSTYCGSGVTVVLG  129 (174)
T ss_dssp             CSCCH-HHHHHHHHTBCTTTCEEEECC
T ss_pred             cCCCc-hHHHHHHHHHHHhcCceEEEE
Confidence            98853 33344555555 445666544

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=86.24  E-value=0.37  Score=34.83  Aligned_cols=91  Identities=14%  Similarity=0.095  Sum_probs=52.6

Q ss_pred             cccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCC--hhhHHHhhhcCCccEEEEc
Q 021331            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~l~~~~~~~~~d~vi~~   79 (314)
                      |+|.+|...++.+...|. .|++.++++.+.....         + .....++...-.+  ...+.+.....++|++|.+
T Consensus        36 G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~---------~-~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~  105 (174)
T d1e3ia2          36 GLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK---------A-LGATDCLNPRELDKPVQDVITELTAGGVDYSLDC  105 (174)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH---------H-TTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred             CCChHHHHHHHHHHHhCCceeeeeccchHHHHHHH---------H-hCCCcccCCccchhhhhhhHhhhhcCCCcEEEEe
Confidence            459999999999999996 6777777766532100         0 1112222211112  2333333344589999999


Q ss_pred             CCCCcccHHHHHHhCCC-CCcEEEEe
Q 021331           80 NGREADEVEPILDALPN-LEQFIYCS  104 (314)
Q Consensus        80 a~~~~~~~~~~~~~~~~-~~~~i~~S  104 (314)
                      .|... .....++.++. -.+++.++
T Consensus       106 ~G~~~-~~~~a~~~~~~g~G~~v~vG  130 (174)
T d1e3ia2         106 AGTAQ-TLKAAVDCTVLGWGSCTVVG  130 (174)
T ss_dssp             SCCHH-HHHHHHHTBCTTTCEEEECC
T ss_pred             cccch-HHHHHHHHhhcCCeEEEecC
Confidence            98532 23445555553 46777654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.08  E-value=0.3  Score=32.98  Aligned_cols=26  Identities=23%  Similarity=0.443  Sum_probs=23.9

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRG   28 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~   28 (314)
                      |.|++|..+|..|.+.|.+|+++.|+
T Consensus        27 GgG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          27 GASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCccHHHHHHHHhhcCCeEEEEEec
Confidence            56999999999999999999999875

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=86.01  E-value=0.26  Score=33.30  Aligned_cols=29  Identities=38%  Similarity=0.536  Sum_probs=25.7

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |.|++|-.+|..|.+.|.+|+++.|.+.-
T Consensus        39 GgG~iG~E~A~~l~~~g~~Vtlv~~~~~l   67 (122)
T d1xhca2          39 GGGFIGLELAGNLAEAGYHVKLIHRGAMF   67 (122)
T ss_dssp             ECSHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred             CCcHHHHHHHHHhhcccceEEEEeccccc
Confidence            56999999999999999999999887543

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=85.69  E-value=0.46  Score=29.19  Aligned_cols=29  Identities=21%  Similarity=0.149  Sum_probs=25.8

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |+|.+|+.++....+-|++|++++.....
T Consensus         8 G~GQLgrMl~~Aa~~LG~~v~vldp~~~~   36 (78)
T d3etja2           8 GNGQLGRMLRQAGEPLGIAVWPVGLDAEP   36 (78)
T ss_dssp             BCSHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred             cCCHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence            56999999999999999999999977655

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=85.53  E-value=0.18  Score=35.78  Aligned_cols=19  Identities=21%  Similarity=0.135  Sum_probs=17.2

Q ss_pred             CCcccccHHHHHHHHHHCC
Q 021331            1 MGGTRFIGVFLSRLLVKEG   19 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g   19 (314)
                      +||+|++|++++-.|...+
T Consensus        10 iGA~G~VG~~~a~~l~~~~   28 (154)
T d1y7ta1          10 TGAAGQIGYSLLFRIAAGE   28 (154)
T ss_dssp             SSTTSHHHHHHHHHHHTTT
T ss_pred             ECCCCHHHHHHHHHHHhcc
Confidence            6999999999999998875

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=85.48  E-value=0.25  Score=34.49  Aligned_cols=30  Identities=13%  Similarity=0.190  Sum_probs=25.7

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~   31 (314)
                      +|| |.+|+.++..|+.++  .+++.++.++..
T Consensus         6 IGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~   37 (142)
T d1guza1           6 IGA-GNVGATTAFRLAEKQLARELVLLDVVEGI   37 (142)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSH
T ss_pred             ECc-CHHHHHHHHHHHhCCCCceEEEecccccc
Confidence            475 999999999999987  689999988765

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=85.14  E-value=0.35  Score=32.25  Aligned_cols=29  Identities=34%  Similarity=0.516  Sum_probs=26.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |.|++|..++..|.+.|.+|+++.|.+..
T Consensus        28 GgG~ig~E~A~~l~~~G~~Vtlve~~~~~   56 (116)
T d1gesa2          28 GAGYIGVELGGVINGLGAKTHLFEMFDAP   56 (116)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCChhhHHHHHHhhccccEEEEEeecchh
Confidence            56999999999999999999999988654

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=85.06  E-value=0.41  Score=32.07  Aligned_cols=29  Identities=24%  Similarity=0.339  Sum_probs=26.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |+|++|-.++..|.+.|.+|+++.+...-
T Consensus        29 G~G~ig~E~A~~l~~~G~~Vtiv~~~~~l   57 (119)
T d3lada2          29 GAGVIGLELGSVWARLGAEVTVLEAMDKF   57 (119)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCChHHHHHHHHHHHcCCceEEEEeeccc
Confidence            46999999999999999999999988654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=85.05  E-value=0.3  Score=32.58  Aligned_cols=29  Identities=28%  Similarity=0.334  Sum_probs=26.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |.|++|-.+|..|.+.|.+|+++.+.+.-
T Consensus        28 GgG~~G~E~A~~l~~~g~~Vtlve~~~~i   56 (115)
T d1lvla2          28 GGGYIGLELGIAYRKLGAQVSVVEARERI   56 (115)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCCHHHHHHHHHHhhcccceEEEeeeccc
Confidence            56999999999999999999999887654

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=84.99  E-value=0.46  Score=35.04  Aligned_cols=67  Identities=15%  Similarity=0.034  Sum_probs=42.4

Q ss_pred             ccccHHHHHHHHHHCCC-eEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCCh---hhHHHhhhcCCccEEEEc
Q 021331            4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         4 tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~l~~~~~~~~~d~vi~~   79 (314)
                      +|.+|...+..+...|. +|+++++++++.....           .-+...+ .|..+.   +.+.++....++|++|.+
T Consensus        34 aG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-----------~~Ga~~~-~~~~~~~~~~~i~~~t~g~g~D~vid~  101 (195)
T d1kola2          34 AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-----------AQGFEIA-DLSLDTPLHEQIAALLGEPEVDCAVDA  101 (195)
T ss_dssp             CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-----------HTTCEEE-ETTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred             cCHHHHHHHHHHHhhcccceeeecccchhhHhhh-----------hccccEE-EeCCCcCHHHHHHHHhCCCCcEEEEEC
Confidence            59999888888887775 7888888776532111           1234433 243333   334444444579999999


Q ss_pred             CCC
Q 021331           80 NGR   82 (314)
Q Consensus        80 a~~   82 (314)
                      .|.
T Consensus       102 vG~  104 (195)
T d1kola2         102 VGF  104 (195)
T ss_dssp             CCT
T ss_pred             ccc
Confidence            884

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=84.74  E-value=0.33  Score=32.51  Aligned_cols=29  Identities=28%  Similarity=0.497  Sum_probs=26.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |.|++|-.++..|.+.|.+|+++.|....
T Consensus        29 GgG~iG~E~A~~l~~~g~~Vtlv~~~~~i   57 (117)
T d1onfa2          29 GSGYIAVELINVIKRLGIDSYIFARGNRI   57 (117)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred             CCchHHHHHHHHHHhccccceeeehhccc
Confidence            56999999999999999999999988654

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=84.70  E-value=0.48  Score=32.48  Aligned_cols=30  Identities=23%  Similarity=0.409  Sum_probs=26.8

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCccc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~   32 (314)
                      |+|++|..++..|.+.|.+|+++.+.+...
T Consensus        42 GgG~iG~E~A~~l~~~g~~Vtvie~~~~~l   71 (133)
T d1q1ra2          42 GGGYIGLEVAATAIKANMHVTLLDTAARVL   71 (133)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred             CCchHHHHHHHHHHhhCcceeeeeeccccc
Confidence            569999999999999999999999887653

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.69  E-value=1.5  Score=31.34  Aligned_cols=72  Identities=17%  Similarity=0.041  Sum_probs=43.9

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |-|.-+|+.++..|+++|..|+.+..+............       .............++.+++...  ..|+||...|
T Consensus        36 GrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~lk~~~~--~aDIvIsavG  106 (171)
T d1edza1          36 NRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLK-------LNKHHVEDLGEYSEDLLKKCSL--DSDVVITGVP  106 (171)
T ss_dssp             CCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSS-------CCCCEEEEEEECCHHHHHHHHH--HCSEEEECCC
T ss_pred             CCccccHHHHHHHHHHCCCEEEEecccccccccccccee-------eeeeccccccccchhHHhhccc--cCCEEEEccC
Confidence            677889999999999999999877654322111110000       0111111111234566888877  8999998887


Q ss_pred             C
Q 021331           82 R   82 (314)
Q Consensus        82 ~   82 (314)
                      .
T Consensus       107 ~  107 (171)
T d1edza1         107 S  107 (171)
T ss_dssp             C
T ss_pred             C
Confidence            5

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=84.37  E-value=0.23  Score=35.70  Aligned_cols=30  Identities=20%  Similarity=0.400  Sum_probs=25.3

Q ss_pred             cccccHHHHHHHHHHCCC--eEEEEEcCCccc
Q 021331            3 GTRFIGVFLSRLLVKEGH--QVTLFTRGKAPI   32 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~--~V~~~~r~~~~~   32 (314)
                      |.|.+|..+++.|.+.|+  +|++.+++++..
T Consensus         8 G~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~   39 (171)
T d2g5ca2           8 GVGFMGGSFAKSLRRSGFKGKIYGYDINPESI   39 (171)
T ss_dssp             SCSHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred             ccCHHHHHHHHHHHhcCCCeEEEEEECChHHH
Confidence            469999999999999985  788888887653

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=84.16  E-value=0.12  Score=39.43  Aligned_cols=69  Identities=13%  Similarity=0.049  Sum_probs=44.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~~   82 (314)
                      |.|.+|+++++.|.+.|.+|++.+.+.........          ..+..     ..+++   +++ ...||+++-||..
T Consensus        46 G~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~----------~~g~~-----~~~~~---~~~-~~~cDIl~PcA~~  106 (230)
T d1leha1          46 GLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVA----------EEGAD-----AVAPN---AIY-GVTCDIFAPCALG  106 (230)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----------HHCCE-----ECCGG---GTT-TCCCSEEEECSCS
T ss_pred             CCCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHH----------hcCCc-----ccCCc---ccc-cccccEecccccc
Confidence            57999999999999999999988766543211110          01121     12333   233 3589999999987


Q ss_pred             CcccHHHH
Q 021331           83 EADEVEPI   90 (314)
Q Consensus        83 ~~~~~~~~   90 (314)
                      +.....++
T Consensus       107 ~~I~~~~~  114 (230)
T d1leha1         107 AVLNDFTI  114 (230)
T ss_dssp             CCBSTTHH
T ss_pred             cccChHHh
Confidence            66554443

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=84.12  E-value=0.22  Score=34.80  Aligned_cols=30  Identities=20%  Similarity=0.299  Sum_probs=25.3

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~   31 (314)
                      +|+ |.+|.+++-.|..++  .+++.+++++..
T Consensus         7 IGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~   38 (143)
T d1llda1           7 IGA-GAVGSTLAFAAAQRGIAREIVLEDIAKER   38 (143)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHH
T ss_pred             ECC-CHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence            365 999999999999997  489999987654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=84.02  E-value=3  Score=31.50  Aligned_cols=103  Identities=13%  Similarity=0.117  Sum_probs=54.9

Q ss_pred             cccccHHHHHHHHHHCCC-eEEEEEcCCcc---cccCCCCCC-----------chhhhhccCceEEEEecCC-ChhhHHH
Q 021331            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAP---IAQQLPGES-----------DQEFAEFSSKILHLKGDRK-DYDFVKS   66 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~~~~~~~~-----------~~~~~~~~~~~~~~~~D~~-d~~~l~~   66 (314)
                      |.|.+|++++..|...|- +++++|.+.-.   ..++.....           .+.+.+..+.+.+...+.. +.+....
T Consensus        37 G~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~~~~~~~~~  116 (247)
T d1jw9b_          37 GLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLDDAELAA  116 (247)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhhhhhccccc
Confidence            469999999999999994 78888865422   222211100           0223333345555544432 3444555


Q ss_pred             hhhcCCccEEEEcCCCCcccHHHHHHhCC-CCCcEEEEeecee
Q 021331           67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGV  108 (314)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~-~~~~~i~~Ss~~v  108 (314)
                      .+.  ..|++|.+... ......+-+.|. ....+|+.+..+.
T Consensus       117 ~~~--~~divid~~d~-~~~~~~in~~~~~~~ip~i~g~~~~~  156 (247)
T d1jw9b_         117 LIA--EHDLVLDCTDN-VAVRNQLNAGCFAAKVPLVSGAAIRM  156 (247)
T ss_dssp             HHH--TSSEEEECCSS-HHHHHHHHHHHHHHTCCEEEEEEEBT
T ss_pred             ccc--ccceeeeccch-hhhhhhHHHHHHHhCCCccccccccc
Confidence            555  67777766542 222223333343 3345665544333

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=83.96  E-value=0.15  Score=36.51  Aligned_cols=29  Identities=10%  Similarity=0.107  Sum_probs=24.8

Q ss_pred             CcccccHHHHHHHHHHCCC--eEEEEEcCCcc
Q 021331            2 GGTRFIGVFLSRLLVKEGH--QVTLFTRGKAP   31 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~   31 (314)
                      |+ |.+|..++-.|..+|.  +++.++++++.
T Consensus        27 Ga-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~   57 (160)
T d1i0za1          27 GV-GQVGMACAISILGKSLADELALVDVLEDK   57 (160)
T ss_dssp             CC-SHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred             CC-CHHHHHHHHHHHhcCCCcEEEEEEeccch
Confidence            64 9999999999999984  89999987654

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.84  E-value=0.43  Score=32.30  Aligned_cols=29  Identities=24%  Similarity=0.424  Sum_probs=26.1

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |.|++|..++..|.+.|.+|+++.|+..-
T Consensus        29 GgG~iG~E~A~~l~~~G~~Vtlv~~~~~~   57 (125)
T d3grsa2          29 GAGYIAVEMAGILSALGSKTSLMIRHDKV   57 (125)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             cCCccHHHHHHHHhcCCcEEEEEeecccc
Confidence            45999999999999999999999998654

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=83.69  E-value=0.36  Score=32.59  Aligned_cols=29  Identities=21%  Similarity=0.360  Sum_probs=26.4

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |.|++|-.+|..|.+.|.+|+++.|++..
T Consensus        32 G~G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          32 GAGYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             ccchHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            45999999999999999999999998765

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=83.68  E-value=0.94  Score=32.25  Aligned_cols=47  Identities=19%  Similarity=0.285  Sum_probs=30.0

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcCC
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a~   81 (314)
                      |.+..+|+.++..|.++|..|+.+...                               ..+ +.+..+  +.|+||.++|
T Consensus        44 GrS~~VG~Pla~lL~~~gatVt~~h~~-------------------------------t~~-l~~~~~--~ADivI~a~G   89 (166)
T d1b0aa1          44 GASNIVGRPMSMELLLAGCTTTVTHRF-------------------------------TKN-LRHHVE--NADLLIVAVG   89 (166)
T ss_dssp             CCCTTTHHHHHHHHHTTTCEEEEECSS-------------------------------CSC-HHHHHH--HCSEEEECSC
T ss_pred             eccccccHHHHHHHHHhhccccccccc-------------------------------cch-hHHHHh--hhhHhhhhcc
Confidence            556667777777776666666654322                               222 345555  7999999988


Q ss_pred             C
Q 021331           82 R   82 (314)
Q Consensus        82 ~   82 (314)
                      .
T Consensus        90 ~   90 (166)
T d1b0aa1          90 K   90 (166)
T ss_dssp             C
T ss_pred             C
Confidence            5

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=83.58  E-value=0.066  Score=39.22  Aligned_cols=26  Identities=15%  Similarity=0.229  Sum_probs=21.5

Q ss_pred             cccccHHHHHHHHHHCC-CeEEEEEcC
Q 021331            3 GTRFIGVFLSRLLVKEG-HQVTLFTRG   28 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~~~r~   28 (314)
                      |.|.||+.+++.|.+++ .+|+++...
T Consensus         8 GfGRIGR~v~Ral~~~~dievVaInd~   34 (178)
T d1b7go1           8 GYGTIGKRVADAIIKQPDMKLVGVAKT   34 (178)
T ss_dssp             CCSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred             CCCHHHHHHHHHHHhCCCCEEEEEECC
Confidence            57999999999999875 788887643

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=83.44  E-value=0.9  Score=35.64  Aligned_cols=27  Identities=19%  Similarity=0.250  Sum_probs=24.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGK   29 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~   29 (314)
                      |.|.+|+++++.|.+.|.+|++++-+.
T Consensus        43 GfGnVG~~~A~~L~e~Gakvv~vsD~~   69 (293)
T d1hwxa1          43 GFGNVGLHSMRYLHRFGAKCVAVGESD   69 (293)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEEccc
Confidence            579999999999999999999987554

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=83.35  E-value=1.6  Score=33.26  Aligned_cols=27  Identities=22%  Similarity=0.252  Sum_probs=23.9

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGK   29 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~   29 (314)
                      |.|.+|+++++.|.+.|.+|++++-..
T Consensus        38 GfGnVG~~~a~~L~~~Gakvv~vsD~~   64 (242)
T d1v9la1          38 GMGNVGRWTAYWLEKMGAKVIAVSDIN   64 (242)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred             CCCHHHHHHHHHHHHcCCeEEEeeccc
Confidence            579999999999999999999888554

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=82.45  E-value=0.51  Score=32.71  Aligned_cols=67  Identities=22%  Similarity=0.285  Sum_probs=41.1

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcccccCCCCCCchhhhh---ccCceEEEEecCCChhhHHHhhhcCCccE
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAKGFDV   75 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~d~~~l~~~~~~~~~d~   75 (314)
                      +|+ |.+|..++-.|+.++  .++..+++++........     .+.+   +.....+...|.       +.++  ++|+
T Consensus         6 IGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~-----Dl~~~~~~~~~~~~~~~~~-------~~~~--~adi   70 (140)
T d1a5za1           6 VGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDAL-----DLIHGTPFTRRANIYAGDY-------ADLK--GSDV   70 (140)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHH-----HHHHHGGGSCCCEEEECCG-------GGGT--TCSE
T ss_pred             ECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhc-----cccccccccccccccCCcH-------HHhc--CCCE
Confidence            365 999999999898887  589999987654321110     1111   112333333322       2355  8999


Q ss_pred             EEEcCCC
Q 021331           76 VYDINGR   82 (314)
Q Consensus        76 vi~~a~~   82 (314)
                      ||-++|.
T Consensus        71 vvitag~   77 (140)
T d1a5za1          71 VIVAAGV   77 (140)
T ss_dssp             EEECCCC
T ss_pred             EEEeccc
Confidence            9999886

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.08  E-value=1.5  Score=31.29  Aligned_cols=26  Identities=23%  Similarity=0.376  Sum_probs=16.5

Q ss_pred             CcccccHHHHHHHHHHCCCeEEEEEc
Q 021331            2 GGTRFIGVFLSRLLVKEGHQVTLFTR   27 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~~~r   27 (314)
                      |.+.-+|..++..|+++|..|+.+..
T Consensus        46 GrS~iVGrPLa~lL~~~gatVt~~~~   71 (170)
T d1a4ia1          46 GRSKIVGAPMHDLLLWNNATVTTCHS   71 (170)
T ss_dssp             CCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred             ecCCccchHHHHHHHhccCceEEEec
Confidence            55666677777766666666665543

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=81.74  E-value=0.94  Score=31.24  Aligned_cols=74  Identities=11%  Similarity=0.033  Sum_probs=45.2

Q ss_pred             Ccc---cccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEE
Q 021331            2 GGT---RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (314)
Q Consensus         2 Gat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~   78 (314)
                      |+|   +..|..+++.|.+.||+|+.+..+....                .+...       ..++.++-.  .+|.++-
T Consensus        26 GaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i----------------~G~~~-------~~sl~dlp~--~iD~v~i   80 (139)
T d2d59a1          26 GASPKPERDANIVMKYLLEHGYDVYPVNPKYEEV----------------LGRKC-------YPSVLDIPD--KIEVVDL   80 (139)
T ss_dssp             TCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE----------------TTEEC-------BSSGGGCSS--CCSEEEE
T ss_pred             eecCCCCCchHHHHHHHHHCCCEEEEECCccccc----------------CCCcc-------cccccccCc--cceEEEE
Confidence            555   7899999999999999988876543331                12211       122333333  6888776


Q ss_pred             cCCCCcccHHHHHHhCC--CCCcEEE
Q 021331           79 INGREADEVEPILDALP--NLEQFIY  102 (314)
Q Consensus        79 ~a~~~~~~~~~~~~~~~--~~~~~i~  102 (314)
                      +..  ...+..+++.+.  +++.+++
T Consensus        81 ~vp--~~~~~~~~~e~~~~g~k~v~~  104 (139)
T d2d59a1          81 FVK--PKLTMEYVEQAIKKGAKVVWF  104 (139)
T ss_dssp             CSC--HHHHHHHHHHHHHHTCSEEEE
T ss_pred             EeC--HHHHHHHHHHHHHhCCCEEEE
Confidence            654  445555666655  6655443

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=81.50  E-value=0.21  Score=35.10  Aligned_cols=30  Identities=17%  Similarity=0.349  Sum_probs=24.6

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~   31 (314)
                      +| +|.+|..++-.|+.+|  .+++.++++...
T Consensus         7 IG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~   38 (146)
T d1hyha1           7 IG-LGNVGAAVAHGLIAQGVADDYVFIDANEAK   38 (146)
T ss_dssp             EC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             EC-cCHHHHHHHHHHHhcCCCceEEEEecccch
Confidence            36 5999999999999887  588888877654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=81.35  E-value=0.22  Score=36.71  Aligned_cols=80  Identities=13%  Similarity=0.184  Sum_probs=46.5

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCc-hhhhh--ccCceEEEEecCCChhhHHHhhhcCCccEEEEc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-QEFAE--FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~   79 (314)
                      |+|..|.+++..|.+.|++|++.+|+++........... ..+++  +..++.+       ..+++++++  +.|+||.+
T Consensus        14 GaG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~-------t~~l~~a~~--~ad~iiia   84 (189)
T d1n1ea2          14 GSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITF-------TSDVEKAYN--GAEIILFV   84 (189)
T ss_dssp             CCSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEE-------ESCHHHHHT--TCSCEEEC
T ss_pred             CCCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccccccccc-------chhhhhccC--CCCEEEEc
Confidence            569999999999999999999999876532100000000 00000  0122221       234678887  89999876


Q ss_pred             CCCCcccHHHHHHh
Q 021331           80 NGREADEVEPILDA   93 (314)
Q Consensus        80 a~~~~~~~~~~~~~   93 (314)
                      ..  ....+.+++.
T Consensus        85 vP--s~~~~~~~~~   96 (189)
T d1n1ea2          85 IP--TQFLRGFFEK   96 (189)
T ss_dssp             SC--HHHHHHHHHH
T ss_pred             Cc--HHHHHHHHHH
Confidence            54  3344444444

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=81.26  E-value=2.2  Score=32.60  Aligned_cols=27  Identities=11%  Similarity=0.084  Sum_probs=23.7

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCC
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGK   29 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~   29 (314)
                      |.|.+|.++++.|.+.|.+|++++-..
T Consensus        43 GfGnVG~~~a~~L~e~GakvvavsD~~   69 (255)
T d1bgva1          43 GFGNVAWGAAKKLAELGAKAVTLSGPD   69 (255)
T ss_dssp             CSSHHHHHHHHHHHHHTCEEEEEEETT
T ss_pred             CCCHHHHHHHHHHHHcCCeEEEEecCC
Confidence            579999999999999999999887543

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=81.02  E-value=0.39  Score=33.95  Aligned_cols=29  Identities=24%  Similarity=0.264  Sum_probs=23.7

Q ss_pred             CcccccHHHHHHHHHHCC-CeEEEEEcCCcc
Q 021331            2 GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP   31 (314)
Q Consensus         2 GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~   31 (314)
                      |+ |.+|+.++..|..++ .++++++.++..
T Consensus        14 Ga-G~VG~~lA~~l~~~~~~el~L~D~~~~~   43 (154)
T d1pzga1          14 GS-GMIGGTMGYLCALRELADVVLYDVVKGM   43 (154)
T ss_dssp             CC-SHHHHHHHHHHHHHTCCEEEEECSSSSH
T ss_pred             CC-CHHHHHHHHHHHhCCCceEEEEEecccc
Confidence            65 999999998888877 488888877654

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=80.96  E-value=0.49  Score=32.90  Aligned_cols=30  Identities=17%  Similarity=0.320  Sum_probs=24.5

Q ss_pred             CCcccccHHHHHHHHHHCC-CeEEEEEcCCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP   31 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~   31 (314)
                      +|+ |.+|..++-.|..++ .+++.++.+++.
T Consensus         7 IGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~   37 (142)
T d1uxja1           7 IGA-GFVGSTTAHWLAAKELGDIVLLDIVEGV   37 (142)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCSEEEEECSSSSH
T ss_pred             ECC-CHHHHHHHHHHHhCCcceEEEEeecccc
Confidence            364 999999999988887 488888887764

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=80.45  E-value=0.65  Score=34.10  Aligned_cols=76  Identities=14%  Similarity=0.119  Sum_probs=49.0

Q ss_pred             CCcccccHHHHHHHHHHCCCeEEEEEcCCcccccCCCCCCchhhhhccCceEEEEecCCChhhHHHhhhcCCccEEEEcC
Q 021331            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d~vi~~a   80 (314)
                      |-|+|....++++.+ . +.+|+++++++.......     +.+..+..++.++.+++.+...+..-+...++|.|+.-.
T Consensus        31 t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~-----~~l~~~~~r~~~~~~~f~~~~~~~~~~~~~~vdgIl~Dl  103 (192)
T d1m6ya2          31 TVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAE-----EKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMDL  103 (192)
T ss_dssp             TCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHH-----HHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEEC
T ss_pred             cCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHH-----HhhccccccccchhHHHhhHHHHHHHcCCCCcceeeecc
Confidence            345566666666654 2 368999999986632111     122333468999999998866665554445799998777


Q ss_pred             CCC
Q 021331           81 GRE   83 (314)
Q Consensus        81 ~~~   83 (314)
                      |..
T Consensus       104 GvS  106 (192)
T d1m6ya2         104 GVS  106 (192)
T ss_dssp             SCC
T ss_pred             chh
Confidence            764

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=80.34  E-value=0.58  Score=31.68  Aligned_cols=29  Identities=14%  Similarity=0.233  Sum_probs=26.0

Q ss_pred             cccccHHHHHHHHHHCCCeEEEEEcCCcc
Q 021331            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (314)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   31 (314)
                      |.|++|-.++..|.+.|.+|+++.+.+.-
T Consensus        33 GgG~IG~E~A~~~~~~G~~Vtive~~~~i   61 (125)
T d1ojta2          33 GGGIIGLEMGTVYSTLGSRLDVVEMMDGL   61 (125)
T ss_dssp             SCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCCHHHHHHHHHhhcCCCEEEEEEeeccc
Confidence            46999999999999999999999987654

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.24  E-value=0.22  Score=35.55  Aligned_cols=30  Identities=13%  Similarity=0.273  Sum_probs=24.8

Q ss_pred             CCcccccHHHHHHHHHHCC--CeEEEEEcCCcc
Q 021331            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (314)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~   31 (314)
                      +| +|.+|..++-.|..+|  .+++.++++.+.
T Consensus        25 IG-aG~VG~~~A~~l~~~~l~~elvL~D~~~~~   56 (159)
T d2ldxa1          25 VG-VGDVGMACAISILLKGLADELALVDADTDK   56 (159)
T ss_dssp             EC-CSHHHHHHHHHHHTTTSCSEEEEECSCHHH
T ss_pred             EC-CCHHHHHHHHHHHhcCCCCEEEEEeCCchh
Confidence            36 4999999999999997  489999987654

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=80.07  E-value=1.6  Score=28.92  Aligned_cols=25  Identities=16%  Similarity=0.179  Sum_probs=21.2

Q ss_pred             cccHHHHHHHHHHCCCeEEEEEcCC
Q 021331            5 RFIGVFLSRLLVKEGHQVTLFTRGK   29 (314)
Q Consensus         5 G~iG~~l~~~L~~~g~~V~~~~r~~   29 (314)
                      |..|..+.+.|++.||+|+.+..+.
T Consensus        14 ~k~g~~v~~~L~~~g~~V~pVnP~~   38 (116)
T d1y81a1          14 AKYGNIILKDLLSKGFEVLPVNPNY   38 (116)
T ss_dssp             TSHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCcHHHHHHHHHHCCCEEEEEcccc
Confidence            6789999999999999988875443