Citrus Sinensis ID: 021350

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310---
Protein Sequence
MIAKCSVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFSW
Secondary Structure (PSIPRED)
ccccccccccccccccccccHHHHHccccccEEEEEccccEEEcccccccHHHHHHHHHHccccEEEEcccccccHHHHHHHHHccccccccccEEcHHHHHHHHHHccccccEEEEcccEEEEEEccccHHHHcccccEEccccccccEEEEcccccccccccccccccHHHHHHHHHHHHHccccEEEccccccccccccEEEcccHHHHHHHHHcccEEEEccccHHHHHHHHHHHccccccEEEEcccHHHHHHHHHHccccEEEEcccccccccccccccccccHHHHHHHHHHccccccEEcccccc
Secondary Structure Prediction (SSPRO)
cccccccccccHHHHHHHccHHHHHHHccccEEEEEcccEEEccccccccHHHHHHHHHHccccEEEEEccccccHHHHHHHHHcccccccHHHEEcHHHHHHHHHHHHcccccccccccEEEEEcccHHHHHHHHcccEEEcccccccEEEEccccccEEEEcccccccHHHHHHHHHHHHHcccEEEEEcccccccccccccccHHHHHHHHHHHccccEEEccccHHHHHHHHHHHcccHccEEEEcccccHHHHHHHHccccEEEEEcccccHHHHHccccccccHHHHHHHHHHccccccEEEccccc
Coil and Loop (DISEMBL)
miakcsvqsndphlfQTLNGLRHIAETRRFKAWLLDqfgvlhdgkkpypgaiSTLEMLATTGAKMVVIsnssrrasttidklkslgfdpslfagaitsgelTHQYLLRRDDAWFAALGRScihmtwsdrgaisleglglkvvenVEEADFILAhgtegmglpsgdvrpmsLQDLEKILEICaskkipmvvanpdyVTVEARALRVMPGTLASKFEKLggevrwmgkpdkiIYKSAMAMVGvdacdsiavgdslhhdikganaagiQSVFIIGGIHAtelgldsygevadlSSVQTLVSkydaypsyvlpsfsw
Flexible Loop (DISEMBL)
miakcsvqsndphlfQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVvisnssrraSTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHgtegmglpsGDVRPMSLQDLEKILEIcaskkipmvvaNPDYVTVEARALRVMPGTLASkfeklggevrwmgKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLvskydaypsyvlpsfsw
Low Complexity Region (SEG)
MIAKCSVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFSW
Disordered region (IsUnstruct)
************HLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN******TTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVL*****
Disordered Region (DISOPRED)
*********************RHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFSW
Disordered Region (DISEMBL)
********SNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFSW
Disordered Region (DISPRO)
**********DPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFSW
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIAKCSVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFSW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	313	2.2.26 [Sep-21-2011]
Q3ZBF9	296	Pyridoxal phosphate phosp	yes	no	0.718	0.760	0.278	2e-08
O32125	256	Uncharacterized hydrolase	yes	no	0.728	0.890	0.247	4e-08
P60487	292	Pyridoxal phosphate phosp	yes	no	0.706	0.756	0.266	3e-07
Q96GD0	296	Pyridoxal phosphate phosp	yes	no	0.741	0.783	0.266	4e-07
Q8VD52	309	Pyridoxal phosphate phosp	yes	no	0.706	0.715	0.269	5e-07
P34492	526	Putative NipSnap protein	no	no	0.747	0.444	0.244	2e-06
Q00472	298	4-nitrophenylphosphatase	yes	no	0.846	0.889	0.226	1e-05
Q4L4U2	263	Protein NagD homolog OS=S	yes	no	0.734	0.874	0.228	2e-05
Q7A1D4	259	Protein NagD homolog OS=S	yes	no	0.728	0.880	0.226	3e-05
Q6GAZ7	259	Protein NagD homolog OS=S	yes	no	0.728	0.880	0.226	3e-05

>sp|Q3ZBF9|PLPP_BOVIN Pyridoxal phosphate phosphatase OS=Bos taurus GN=PDXP PE=1 SV=1

 Score = 59.7 bits (143), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 113/273 (41%), Gaps = 48/273 (17%)

Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
           R +  L D  GVL +G++  PGA   LE LA  G   + +SN+SRRA   +  +   LGF
Sbjct: 18  RAQGVLFDCNGVLWNGERAVPGAPELLERLAQAGKATLFVSNNSRRARPELALRFARLGF 77

Query: 88  ----DPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAI-SLEGLGLKVV 142
                  LF+ A+ +  L  Q LL   D                 +GA+  L G GL+  
Sbjct: 78  GGLRSEQLFSSALCAARLLRQRLLGPPDT----------------QGAVFVLGGEGLRAE 121

Query: 143 ENVEEADFILAHGTEGMGLPSGD------VRPMSLQ-----DLEKILEICASKKIP---M 188
                   + A G    G PS D      VR + +         K+ E CA  + P   +
Sbjct: 122 --------LRAAGLRLAGDPSEDPGAAPRVRAVLVGYDEHFSFAKLSEACAHLRDPDCLL 173

Query: 189 VVANPDYVTVEARALRVMPGT--LASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACD 245
           V  + D     +   R  PGT  LA+  E   G +   +GKP   +++       VD   
Sbjct: 174 VATDRDPWHPLSDGSRT-PGTGSLAAAVETASGRQALVVGKPSPYMFECITEHFSVDPGR 232

Query: 246 SIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE 278
           ++ VGD L  DI   +  G+ +V  + G+ + E
Sbjct: 233 TLMVGDRLETDILFGHRCGMTTVLTLTGVSSLE 265

Protein serine phosphatase that dephosphorylates 'Ser-3' in cofilin and probably also dephosphorylates phospho-serine residues in DSTN. Regulates cofilin-dependent actin cytoskeleton reorganization. Required for normal progress through mitosis and normal cytokinesis. Does not dephosphorylate phospho-threonines in LIMK1. Does not dephosphorylate peptides containing phospho-tyrosine. Pyridoxal phosphate phosphatase. Has some activity towards pyridoxal 5'-phosphate (PLP), pyridoxine 5'-phosphate (PMP) and pyridoxine 5'-phosphate (PNP), with a highest activity with PLP followed by PNP.
Bos taurus (taxid: 9913)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 7EC: 4

>sp|O32125|YUTF_BACSU Uncharacterized hydrolase YutF OS=Bacillus subtilis (strain 168) GN=yutF PE=1 SV=1

 Score = 59.3 bits (142), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 27/255 (10%)

Query: 28  RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAK-MVVISNSSRRASTTIDKLKSLG 86
           + +K +L+D  G +++G +    A   +  L   G   + V +NSSR      DKL S  
Sbjct: 2   KTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVS-- 59

Query: 87  FD-PSLFAGAITSGELTHQYLLR-RDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVEN 144
           FD P+      T+   T Q++ + + DA    +G   I      R AI   GL       
Sbjct: 60  FDIPATEEQVFTTSMATAQHIAQQKKDASVYVIGEEGI------RQAIEENGLTF----G 109

Query: 145 VEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALR 204
            E ADF++      +      V  +++++  + +       IP             R L 
Sbjct: 110 GENADFVVVGIDRSITYEKFAVGCLAIRNGARFISTNGDIAIPT-----------ERGLL 158

Query: 205 VMPGTLASKFE-KLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAA 263
              G+L S      G +  ++GKP+ II + AM ++G D  +++ VGD+   DI     A
Sbjct: 159 PGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINA 218

Query: 264 GIQSVFIIGGIHATE 278
           G+ ++ +  G+   E
Sbjct: 219 GMDTLLVHTGVTKRE 233

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 3

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P60487|PLPP_MOUSE Pyridoxal phosphate phosphatase OS=Mus musculus GN=Pdxp PE=1 SV=1

 Score = 56.6 bits (135), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 106/263 (40%), Gaps = 42/263 (15%)

Query: 34  LLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF----D 88
           L D  GVL +G++  PGA   L+ LA  G   + +SN+SRRA   +  +   LGF     
Sbjct: 23  LFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARLGFAGLRA 82

Query: 89  PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEA 148
             LF+ A+ +  L  Q L    DA  A                  L G GL+        
Sbjct: 83  EQLFSSALCAARLLRQRLSGPPDASGA---------------VFVLGGEGLRAE------ 121

Query: 149 DFILAHGTEGMGLPSGDVRPMSLQ-------DLEKILEICASKKIP---MVVANPDYVTV 198
             + A G    G P  D R  ++           ++ E CA  + P   +V  + D    
Sbjct: 122 --LRAAGLRLAGDPGEDPRVRAVLVGYDEQFSFSRLTEACAHLRDPDCLLVATDRDPWHP 179

Query: 199 EARALRVMPGT--LASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHH 255
            +   R  PGT  LA+  E   G +   +GKP   +++       VD   ++ VGD L  
Sbjct: 180 LSDGSRT-PGTGSLAAAVETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLET 238

Query: 256 DIKGANAAGIQSVFIIGGIHATE 278
           DI   +  G+ +V  + G+ + E
Sbjct: 239 DILFGHRCGMTTVLTLTGVSSLE 261

Protein serine phosphatase that dephosphorylates 'Ser-3' in cofilin and probably also dephosphorylates phospho-serine residues in DSTN. Regulates cofilin-dependent actin cytoskeleton reorganization. Required for normal progress through mitosis and normal cytokinesis. Does not dephosphorylate phospho-threonines in LIMK1. Does not dephosphorylate peptides containing phospho-tyrosine. Pyridoxal phosphate phosphatase. Has some activity towards pyridoxal 5'-phosphate (PLP), pyridoxine 5'-phosphate (PMP) and pyridoxine 5'-phosphate (PNP), with a highest activity with PLP followed by PNP.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 7

EC: 4

>sp|Q96GD0|PLPP_HUMAN Pyridoxal phosphate phosphatase OS=Homo sapiens GN=PDXP PE=1 SV=2

 Score = 55.8 bits (133), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 107/266 (40%), Gaps = 34/266 (12%)

Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
           R +  L D  GVL +G++  PGA   LE LA  G   + +SN+SRRA   +  +   LGF
Sbjct: 18  RAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGF 77

Query: 88  D----PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVE 143
                  LF+ A+ +  L  Q L    DA  A                  L G GL+   
Sbjct: 78  GGLRAEQLFSSALCAARLLRQRLPGPPDAPGA---------------VFVLGGEGLRA-- 120

Query: 144 NVEEADFILAHGTEGMGLPSGDVRPMSLQ-----DLEKILEICASKKIP---MVVANPDY 195
            +  A   LA         +  VR + +         K+ E CA  + P   +V  + D 
Sbjct: 121 ELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDP 180

Query: 196 VTVEARALRVMPGT--LASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDS 252
               +   R  PGT  LA+  E   G +   +GKP   +++       +D   ++ VGD 
Sbjct: 181 WHPLSDGSRT-PGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDR 239

Query: 253 LHHDIKGANAAGIQSVFIIGGIHATE 278
           L  DI   +  G+ +V  + G+   E
Sbjct: 240 LETDILFGHRCGMTTVLTLTGVSRLE 265

Protein serine phosphatase that dephosphorylates 'Ser-3' in cofilin and probably also dephosphorylates phospho-serine residues in DSTN. Regulates cofilin-dependent actin cytoskeleton reorganization. Required for normal progress through mitosis and normal cytokinesis. Does not dephosphorylate phospho-threonines in LIMK1. Does not dephosphorylate peptides containing phospho-tyrosine. Pyridoxal phosphate phosphatase. Has some activity towards pyridoxal 5'-phosphate (PLP), pyridoxine 5'-phosphate (PMP) and pyridoxine 5'-phosphate (PNP), with a highest activity with PLP followed by PNP.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 7

EC: 4

>sp|Q8VD52|PLPP_RAT Pyridoxal phosphate phosphatase OS=Rattus norvegicus GN=Pdxp PE=1 SV=2

 Score = 55.5 bits (132), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 104/263 (39%), Gaps = 42/263 (15%)

Query: 34  LLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGFD---- 88
           L D  GVL +G++  PGA   L+ LA  G   + +SN+SRRA   +  +   LGF     
Sbjct: 23  LFDCDGVLWNGERIVPGAPELLQRLAQAGKATLFVSNNSRRARPELALRFARLGFTGLRA 82

Query: 89  PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEA 148
             LF+ A+ +  L  Q L    DA  A                  L G GL+        
Sbjct: 83  EELFSSAVCAARLLRQRLPGPPDAPGA---------------VFVLGGEGLRAE------ 121

Query: 149 DFILAHGTEGMGLPSGDVRPMSLQ-------DLEKILEICASKKIP---MVVANPDYVTV 198
             + A G    G P  D R  ++           K+ E CA  + P   +V  + D    
Sbjct: 122 --LRAAGLRLAGDPGDDPRVRAVLVGYDEHFSFAKLTEACAHLRDPDCLLVATDRDPWHP 179

Query: 199 EARALRVMPGT--LASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHH 255
                R  PGT  LA+  E   G +   +GKP   +++       VD    + VGD L  
Sbjct: 180 LTDGSRT-PGTGSLAAAVETASGRQALVVGKPSPYMFQCITEDFSVDPARMLMVGDRLET 238

Query: 256 DIKGANAAGIQSVFIIGGIHATE 278
           DI   +  G+ +V  + G+ + E
Sbjct: 239 DILFGHRCGMTTVLTLTGVSSLE 261

Protein serine phosphatase that dephosphorylates 'Ser-3' in cofilin and probably also dephosphorylates phospho-serine residues in DSTN. Regulates cofilin-dependent actin cytoskeleton reorganization. Required for normal progress through mitosis and normal cytokinesis. Does not dephosphorylate phospho-threonines in LIMK1. Does not dephosphorylate peptides containing phospho-tyrosine. Pyridoxal phosphate phosphatase. Has some activity towards pyridoxal 5'-phosphate (PLP), pyridoxine 5'-phosphate (PMP) and pyridoxine 5'-phosphate (PNP), with a highest activity with PLP followed by PNP.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 7

EC: 4

>sp|P34492|YMQ1_CAEEL Putative NipSnap protein K02D10.1 OS=Caenorhabditis elegans GN=K02D10.1 PE=2 SV=4

 Score = 53.9 bits (128), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 95/249 (38%), Gaps = 15/249 (6%)

Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVI--SNSSRRASTTIDKLKSLG 86
            +  +L D  GVL  G  P PGAI  + +L    +K V +  +NS++     + K++ LG
Sbjct: 14  NYDTFLFDADGVLWTGDIPVPGAIEWINLLLEDPSKKVFVLTNNSTKTLEQYMKKIEKLG 73

Query: 87  FDPSLFAGAITSGELTHQYLLRRDDA----WFAALGRSCIHMTWSDRGAISLEGLGLKVV 142
           F        I+   +   YL    D     +   +G   +  T  + G +   G G   +
Sbjct: 74  FGHLGRNNVISPAIVLADYLKSNADKFSGEYVYLIGTENLKATLENDGGVKCFGTGPDSI 133

Query: 143 ENVEEADFILAHGTEGMGLPSGDV----RPMSLQDLEKILEICASKKIPMVVANPDYVTV 198
            +  + DFI  H  +    P   V       S   + K         +  +V N DY   
Sbjct: 134 RDHTDGDFI--HKVDMSIAPKAVVCSYDAHFSYPKIMKASNYLQDPSVEYLVTNQDYTFP 191

Query: 199 EARALRVMPG---TLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHH 255
                 V+PG   T A+     G + +  GKP K +    +    VD   ++  GD L  
Sbjct: 192 GPVPGVVIPGSGATSAAVTAVTGRDPKVFGKPHKPMADFLLRRAHVDPKRTVMFGDRLDT 251

Query: 256 DIKGANAAG 264
           DI   NA G
Sbjct: 252 DIMFGNANG 260

Caenorhabditis elegans (taxid: 6239)

>sp|Q00472|PNPP_SCHPO 4-nitrophenylphosphatase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pho2 PE=4 SV=2

 Score = 51.2 bits (121), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 118/278 (42%), Gaps = 13/278 (4%)

Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT-IDKLKSLGF 87
           +F  +L D  GVL  G KP PG   T+++L + G +++ +SN+S ++  T ++K+   G 
Sbjct: 17  KFDVFLFDCDGVLWSGSKPIPGVTDTMKLLRSLGKQIIFVSNNSTKSRETYMNKINEHGI 76

Query: 88  DPSL---FAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGL--GLKVV 142
              L   +  A +S     + L    D     LG + I       G   + G    L+  
Sbjct: 77  AAKLEEIYPSAYSSATYVKKVLKLPADKKVFVLGEAGIEDELDRVGVAHIGGTDPSLRRA 136

Query: 143 ENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARA 202
              E+ + I    + G  L   D+    L+      +         ++ N D  +     
Sbjct: 137 LASEDVEKIGPDPSVGAVLCGMDMHVTYLKYC-MAFQYLQDPNCAFLLTNQD--STFPTN 193

Query: 203 LRVMPGTLASKFEKL---GGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKG 259
            + +PG+ A  +  +   G + + +GKP   + ++ +A V  D   +  VGD L+ DI+ 
Sbjct: 194 GKFLPGSGAISYPLIFSTGRQPKILGKPYDEMMEAIIANVNFDRKKACFVGDRLNTDIQF 253

Query: 260 ANAAGI-QSVFIIGGIHATELGLDSYGEVADLSSVQTL 296
           A  + +  S+ ++ G+   E  L+    V     V++L
Sbjct: 254 AKNSNLGGSLLVLTGVSKEEEILEKDAPVVPDYYVESL 291

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 1

>sp|Q4L4U2|NAGD_STAHJ Protein NagD homolog OS=Staphylococcus haemolyticus (strain JCSC1435) GN=nagD PE=3 SV=1

 Score = 50.4 bits (119), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 105/254 (41%), Gaps = 24/254 (9%)

Query: 28  RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
           + +K +L+D  G ++ G     GA   ++ L       + V +NS++       KLK + 
Sbjct: 2   KNYKGYLIDLDGTMYLGTDEIDGAAQFIDYLNNHQIPHLYVTNNSTKTPEEVTQKLKEMN 61

Query: 87  FDPSLFAGAITSGELTHQYLL-RRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
            D       +TS   T  Y+   + DA    LG + +      R A++  GL +K  ENV
Sbjct: 62  IDAKP-EEVVTSALATANYISDEKSDATVYMLGGNGL------RTALTEAGLTVKDDENV 114

Query: 146 EEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRV 205
              D++       +GL       ++ + L  +  +   K    +  NPD    + R    
Sbjct: 115 ---DYV------AIGLDEN----VTYEKL-AVATLAVRKGARFISTNPDVSIPKERGFLP 160

Query: 206 MPGTLASKFEKLGGEV-RWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAG 264
             G + S      G+  +++GKP+ +I   A+ ++ +D  D   VGD    DI      G
Sbjct: 161 GNGAITSVVSVSTGQAPQFIGKPEPVIMDIALDILKLDKSDVAMVGDLYDTDIMSGINVG 220

Query: 265 IQSVFIIGGIHATE 278
           + ++ +  G+   E
Sbjct: 221 VDTIHVQTGVTTYE 234

Staphylococcus haemolyticus (strain JCSC1435) (taxid: 279808)

>sp|Q7A1D4|NAGD_STAAW Protein NagD homolog OS=Staphylococcus aureus (strain MW2) GN=nagD PE=3 SV=1

 Score = 49.7 bits (117), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 109/256 (42%), Gaps = 28/256 (10%)

Query: 28  RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
           +++KA+L+D  G ++ G     GA   ++ L   G   + V +NS++      +KL+ + 
Sbjct: 2   KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61

Query: 87  FDPSLFAGAITSGELTHQYLLRRDD-AWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
            D +     +TS   T  Y+  +   A    LG S ++   ++ G          V++N 
Sbjct: 62  ID-AKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGL---------VIKND 111

Query: 146 EEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRV 205
           E  D+++      +GL       ++ + L  I  +        +  NPD    + R L  
Sbjct: 112 EHVDYVV------IGLD----EQVTYEKL-AIATLGVRNGATFISTNPDVSIPKERGL-- 158

Query: 206 MPGTLA---SKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANA 262
           +PG  A         G   +++GKP+ II   A+ ++G+D  +   VGD    DI     
Sbjct: 159 LPGNGAITSVVSVSTGVSPQFIGKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGIN 218

Query: 263 AGIQSVFIIGGIHATE 278
            G+ ++ +  G+   E
Sbjct: 219 VGMDTIHVQTGVSTLE 234

Staphylococcus aureus (strain MW2) (taxid: 196620)

>sp|Q6GAZ7|NAGD_STAAS Protein NagD homolog OS=Staphylococcus aureus (strain MSSA476) GN=nagD PE=3 SV=1

 Score = 49.7 bits (117), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 109/256 (42%), Gaps = 28/256 (10%)

Query: 28  RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLG 86
           +++KA+L+D  G ++ G     GA   ++ L   G   + V +NS++      +KL+ + 
Sbjct: 2   KQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMH 61

Query: 87  FDPSLFAGAITSGELTHQYLLRRDD-AWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
            D +     +TS   T  Y+  +   A    LG S ++   ++ G          V++N 
Sbjct: 62  ID-AKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGL---------VIKND 111

Query: 146 EEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRV 205
           E  D+++      +GL       ++ + L  I  +        +  NPD    + R L  
Sbjct: 112 EHVDYVV------IGLD----EQVTYEKL-AIATLGVRNGATFISTNPDVSIPKERGL-- 158

Query: 206 MPGTLA---SKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANA 262
           +PG  A         G   +++GKP+ II   A+ ++G+D  +   VGD    DI     
Sbjct: 159 LPGNGAITSVVSVSTGVSPQFIGKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGIN 218

Query: 263 AGIQSVFIIGGIHATE 278
            G+ ++ +  G+   E
Sbjct: 219 VGMDTIHVQTGVSTLE 234

Staphylococcus aureus (strain MSSA476) (taxid: 282459)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	313
255567758	313	catalytic, putative [Ricinus communis] g	1.0	1.0	0.811	1e-152
224127222	308	predicted protein [Populus trichocarpa]	0.980	0.996	0.785	1e-142
225434150	314	PREDICTED: uncharacterized hydrolase yut	1.0	0.996	0.786	1e-138
449452883	313	PREDICTED: uncharacterized hydrolase Yut	0.984	0.984	0.795	1e-137
357475623	312	hypothetical protein MTR_4g087590 [Medic	0.996	1.0	0.773	1e-136
356521455	315	PREDICTED: uncharacterized hydrolase yut	1.0	0.993	0.758	1e-132
356500114	315	PREDICTED: uncharacterized hydrolase yut	1.0	0.993	0.755	1e-132
297807077	306	hypothetical protein ARALYDRAFT_909002 [	0.971	0.993	0.715	1e-130
19310550	316	unknown protein [Arabidopsis thaliana]	0.971	0.962	0.702	1e-127
42567769	306	haloacid dehalogenase-like hydrolase dom	0.971	0.993	0.702	1e-127

>gi|255567758|ref|XP_002524857.1| catalytic, putative [Ricinus communis] gi|223535820|gb|EEF37481.1| catalytic, putative [Ricinus communis]

 Score =  542 bits (1396), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 254/313 (81%), Positives = 287/313 (91%)

Query: 1   MIAKCSVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLAT 60
           M+ + S++ N+ HLFQT NGL+H+AETRRFKAWLLDQFGVLHDGK+PYPGAISTL+ +A+
Sbjct: 1   MMPQSSIKYNEAHLFQTFNGLQHLAETRRFKAWLLDQFGVLHDGKQPYPGAISTLKKIAS 60

Query: 61  TGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRS 120
           +GAKMV+ISNSSRRASTT+DK+KSLGFDPSLF GAITSGELTHQ+L RRDD WFAALG+S
Sbjct: 61  SGAKMVIISNSSRRASTTMDKMKSLGFDPSLFVGAITSGELTHQFLQRRDDDWFAALGKS 120

Query: 121 CIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEI 180
           CIHMTWSDRGAISLEGLGL+VVENVEEA F+LAHGTE +G PSG   PM+L++LEKILE 
Sbjct: 121 CIHMTWSDRGAISLEGLGLQVVENVEEAAFVLAHGTEALGQPSGAACPMTLEELEKILEH 180

Query: 181 CASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVG 240
           CA+K IPMVVANPD+VTVEAR LRVMPGTLA+K+EKLGGEV+WMGKPDKIIYKSAM M G
Sbjct: 181 CAAKGIPMVVANPDFVTVEARNLRVMPGTLAAKYEKLGGEVKWMGKPDKIIYKSAMVMAG 240

Query: 241 VDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKY 300
           VDA DSIAVGDSLHHDIKGANAAGIQS FI GGIHA+ELGL S+GE+ADLSSVQ L SKY
Sbjct: 241 VDALDSIAVGDSLHHDIKGANAAGIQSAFITGGIHASELGLGSFGEIADLSSVQALASKY 300

Query: 301 DAYPSYVLPSFSW 313
           DA+PSYVLPSF+W
Sbjct: 301 DAHPSYVLPSFTW 313

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127222|ref|XP_002329430.1| predicted protein [Populus trichocarpa] gi|222870480|gb|EEF07611.1| predicted protein [Populus trichocarpa]

 Score =  510 bits (1313), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 241/307 (78%), Positives = 276/307 (89%)

Query: 7   VQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMV 66
           +QS++  LFQT NGL+HIA+T +FKAW LDQFGVLHDGK+PYPGAISTL+ LATTGAKMV
Sbjct: 2   LQSSELQLFQTFNGLQHIAKTHQFKAWFLDQFGVLHDGKQPYPGAISTLQKLATTGAKMV 61

Query: 67  VISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTW 126
           +ISNSSRRASTT++K+KSLGFD SLF GAITSGELTHQYL RRD  WFAALG+SCIHMTW
Sbjct: 62  IISNSSRRASTTMEKMKSLGFDTSLFLGAITSGELTHQYLQRRDADWFAALGKSCIHMTW 121

Query: 127 SDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKI 186
             RGAISLEGLGL+VV+ VEEA+F+LAHGTE +GL SG   PM+L++LEK+LE CA+K+I
Sbjct: 122 KGRGAISLEGLGLQVVDKVEEAEFVLAHGTEALGLSSGASCPMTLEELEKVLERCAAKQI 181

Query: 187 PMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDS 246
           PMVVANPD+VTVEAR LRVMPGTLA+K+EKLGGEV+ MGKPDKIIYKSAM + GVDA DS
Sbjct: 182 PMVVANPDFVTVEARDLRVMPGTLAAKYEKLGGEVKSMGKPDKIIYKSAMELAGVDAFDS 241

Query: 247 IAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSY 306
           IAVGDSLHHDIKGANA GI+S FI GGIHATELG++S+GE ADLSSVQ L SKYDAYPS+
Sbjct: 242 IAVGDSLHHDIKGANAVGIRSAFITGGIHATELGVNSFGEEADLSSVQALASKYDAYPSF 301

Query: 307 VLPSFSW 313
           VLPSF+W
Sbjct: 302 VLPSFTW 308

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434150|ref|XP_002278008.1| PREDICTED: uncharacterized hydrolase yutF [Vitis vinifera] gi|296084318|emb|CBI24706.3| unnamed protein product [Vitis vinifera]

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 247/314 (78%), Positives = 277/314 (88%), Gaps = 1/314 (0%)

Query: 1   MIAKCSVQ-SNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLA 59
           M+ +CS+  S+D  LF T NG++ +++T  FKAW LDQFGVLHDGK+PYPGAISTLE LA
Sbjct: 1   MMPRCSISPSSDVQLFHTFNGIQQLSQTHHFKAWFLDQFGVLHDGKQPYPGAISTLEKLA 60

Query: 60  TTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGR 119
           T+GAKMV+ISNSSRR+S TI+K+KSLGFDPSLF GAITSGELTHQ+LLRRDDA FA LGR
Sbjct: 61  TSGAKMVIISNSSRRSSITIEKMKSLGFDPSLFVGAITSGELTHQHLLRRDDAGFAKLGR 120

Query: 120 SCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILE 179
           SCIHMTWSDRGAISLEGLGL+VV+ VEEA+F+LAHGTE +GLPSG V PM L+DLEKIL 
Sbjct: 121 SCIHMTWSDRGAISLEGLGLQVVDKVEEAEFVLAHGTEALGLPSGAVLPMKLEDLEKILG 180

Query: 180 ICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMV 239
            CA+K IPMVVANPD+VTVEARA  VMPG LA+K+EKLGGEV+WMGKPDKIIYKSAMAMV
Sbjct: 181 RCAAKNIPMVVANPDFVTVEARAFCVMPGALAAKYEKLGGEVKWMGKPDKIIYKSAMAMV 240

Query: 240 GVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSK 299
           GVDA D IAVGDSLHHDIKGAN AGIQS FI GGIHA ELGL S+GEVAD SSVQ L SK
Sbjct: 241 GVDASDCIAVGDSLHHDIKGANVAGIQSAFITGGIHANELGLGSFGEVADSSSVQALASK 300

Query: 300 YDAYPSYVLPSFSW 313
           YDA+PSYVLP+FSW
Sbjct: 301 YDAHPSYVLPAFSW 314

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452883|ref|XP_004144188.1| PREDICTED: uncharacterized hydrolase YutF-like [Cucumis sativus] gi|449511400|ref|XP_004163945.1| PREDICTED: uncharacterized hydrolase YutF-like [Cucumis sativus]

 Score =  493 bits (1269), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 245/308 (79%), Positives = 277/308 (89%)

Query: 6   SVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKM 65
           SV S + HLFQ+ NGL+ +A+T RFKAW LDQFGVLHDGK+PYPGA+  LE LA  G KM
Sbjct: 6   SVMSPESHLFQSCNGLQQLAQTCRFKAWFLDQFGVLHDGKQPYPGAVLALEKLAECGTKM 65

Query: 66  VVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMT 125
           V+ISNSSRR+STT++KLKSLGFDPSLF GAITSGELTH+YL RRDDAWFAALGRSCIHMT
Sbjct: 66  VIISNSSRRSSTTMEKLKSLGFDPSLFVGAITSGELTHRYLQRRDDAWFAALGRSCIHMT 125

Query: 126 WSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKK 185
           WS RGAISLEGLGL+VV+NVEEA+FILAHGTE +G PSGD  PM+L++LEKILE CA+KK
Sbjct: 126 WSSRGAISLEGLGLRVVDNVEEAEFILAHGTEALGHPSGDSLPMTLEELEKILEQCAAKK 185

Query: 186 IPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACD 245
           IPMVVANPDYVTVEAR LRVMPGTLASK+EKLGGEV+WMGKPDKIIY+SAM++VGV+A D
Sbjct: 186 IPMVVANPDYVTVEARDLRVMPGTLASKYEKLGGEVKWMGKPDKIIYQSAMSIVGVNASD 245

Query: 246 SIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPS 305
           SIAVGDSLHHDIKGANAAGIQSVFI GGIHATELGL ++ E AD++SV+ L S Y AYPS
Sbjct: 246 SIAVGDSLHHDIKGANAAGIQSVFITGGIHATELGLGNFDETADMNSVKALASNYGAYPS 305

Query: 306 YVLPSFSW 313
           YVLPSF+W
Sbjct: 306 YVLPSFTW 313

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357475623|ref|XP_003608097.1| hypothetical protein MTR_4g087590 [Medicago truncatula] gi|355509152|gb|AES90294.1| hypothetical protein MTR_4g087590 [Medicago truncatula]

 Score =  489 bits (1258), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 242/313 (77%), Positives = 274/313 (87%), Gaps = 1/313 (0%)

Query: 1   MIAKCSVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLAT 60
           MI KCS  S  P  FQT  GLR +AETRRFK WLLDQFGVLHDGK+PYPGAISTLE +A 
Sbjct: 1   MIPKCS-SSLHPLQFQTFTGLRQLAETRRFKVWLLDQFGVLHDGKQPYPGAISTLENIAK 59

Query: 61  TGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRS 120
           TG KMV+ISNSSRR+S T++K+KSLGFD SLF GAITSGELTHQYL RRDD WFA+LGRS
Sbjct: 60  TGGKMVIISNSSRRSSVTLEKVKSLGFDASLFLGAITSGELTHQYLQRRDDPWFASLGRS 119

Query: 121 CIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEI 180
           CIH TWS RGAISLEGL L+VVENVEEA+F+LAHGTE +G  +G+ R M L+DLE+ILE+
Sbjct: 120 CIHFTWSGRGAISLEGLDLRVVENVEEAEFVLAHGTEALGGANGNARSMKLEDLEQILEL 179

Query: 181 CASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVG 240
           CA+K+IPMVVANPDYVTVEAR LRVMPGTLA+K+EKLGGEV+WMGKPD+IIYKSAMAM G
Sbjct: 180 CAAKRIPMVVANPDYVTVEARDLRVMPGTLAAKYEKLGGEVKWMGKPDEIIYKSAMAMAG 239

Query: 241 VDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKY 300
            D  D IAVGDSLHHDIKGANAAGIQS+FI GGIHATELGL  +GE AD SSV++LV+KY
Sbjct: 240 TDVSDCIAVGDSLHHDIKGANAAGIQSIFITGGIHATELGLHGFGEEADSSSVESLVTKY 299

Query: 301 DAYPSYVLPSFSW 313
           +AYPSYVLP+F+W
Sbjct: 300 NAYPSYVLPAFTW 312

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521455|ref|XP_003529371.1| PREDICTED: uncharacterized hydrolase yutF-like [Glycine max]

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 239/315 (75%), Positives = 268/315 (85%), Gaps = 2/315 (0%)

Query: 1   MIAKCSVQSND--PHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEML 58
           MI +CSV      P  FQ LNGLR +AETRRFK WLLDQFGVLHDGK+PYPGAISTLE +
Sbjct: 1   MIPRCSVSPPQIRPFQFQNLNGLRQLAETRRFKVWLLDQFGVLHDGKQPYPGAISTLENI 60

Query: 59  ATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALG 118
           A TGAKMV+ISNSSRR+S TI+K+K LGFD SLF GAITSGELTHQYL RRDD WFAALG
Sbjct: 61  AKTGAKMVIISNSSRRSSVTIEKVKGLGFDASLFLGAITSGELTHQYLQRRDDPWFAALG 120

Query: 119 RSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKIL 178
           RSCIH TW+ RGAI LEGL L+VVENVEEA+F+LAHGTE +G   G    M L+D+E+IL
Sbjct: 121 RSCIHFTWNGRGAIPLEGLDLRVVENVEEAEFVLAHGTEALGNADGSSCSMKLEDMERIL 180

Query: 179 EICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAM 238
           E+CA+K IPMVVANPDYVTVEAR LRVMPGTLA+K+EKLGGEV+WMGKPD+IIYKSAMAM
Sbjct: 181 ELCAAKGIPMVVANPDYVTVEARDLRVMPGTLAAKYEKLGGEVKWMGKPDEIIYKSAMAM 240

Query: 239 VGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVS 298
            G D  D IAVGDS HHDIKGANAAGI+SVFI GGIHATELGL  +GEVAD SSVQ+L +
Sbjct: 241 AGTDVSDCIAVGDSFHHDIKGANAAGIESVFITGGIHATELGLHGFGEVADSSSVQSLAT 300

Query: 299 KYDAYPSYVLPSFSW 313
           KY+AYPSYVL +F+W
Sbjct: 301 KYEAYPSYVLRAFTW 315

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500114|ref|XP_003518879.1| PREDICTED: uncharacterized hydrolase yutF-like [Glycine max]

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 238/315 (75%), Positives = 267/315 (84%), Gaps = 2/315 (0%)

Query: 1   MIAKCSVQSND--PHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEML 58
           M  KCSV      P  FQ LNGLR +AETRRFK WLLDQFGVLHDGK+PYPGAISTLE +
Sbjct: 1   MNPKCSVPPPQIRPFQFQNLNGLRQLAETRRFKGWLLDQFGVLHDGKEPYPGAISTLENI 60

Query: 59  ATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALG 118
           A TGAKMV+ISNSSRR+S TI+K+K LGFD SLF GAITSGELTHQYL RRDD WFA LG
Sbjct: 61  AKTGAKMVIISNSSRRSSVTIEKVKGLGFDASLFLGAITSGELTHQYLQRRDDPWFATLG 120

Query: 119 RSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKIL 178
           RSCIH TW+ RGAISLEGL L+VV NVEEA+F+LAHGTE +G   G  R M L+D+EKIL
Sbjct: 121 RSCIHFTWNGRGAISLEGLDLRVVANVEEAEFVLAHGTEALGNADGTARSMKLEDMEKIL 180

Query: 179 EICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAM 238
           E+CA+K IPMVVANPDYVTVEAR LRVMPGTLA+K+EKLGGEV+WMGKPD+IIYKSA+AM
Sbjct: 181 ELCAAKGIPMVVANPDYVTVEARDLRVMPGTLAAKYEKLGGEVKWMGKPDEIIYKSAIAM 240

Query: 239 VGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVS 298
            G D  + IAVGDS HHDIKGANAAGI+SVFI GGIHA ELGL  +GEVAD SSVQ+L +
Sbjct: 241 AGTDVSECIAVGDSFHHDIKGANAAGIKSVFITGGIHAAELGLHGFGEVADSSSVQSLAT 300

Query: 299 KYDAYPSYVLPSFSW 313
           KY+AYPSYVLP+F+W
Sbjct: 301 KYEAYPSYVLPAFTW 315

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297807077|ref|XP_002871422.1| hypothetical protein ARALYDRAFT_909002 [Arabidopsis lyrata subsp. lyrata] gi|297317259|gb|EFH47681.1| hypothetical protein ARALYDRAFT_909002 [Arabidopsis lyrata subsp. lyrata]

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 221/309 (71%), Positives = 260/309 (84%), Gaps = 5/309 (1%)

Query: 5   CSVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAK 64
           CS Q + P     +NGL+ I ETR FKAWLLDQ+GVLHDGKKPYPGAISTL+ LAT GAK
Sbjct: 3   CSSQISQP-----MNGLKDIVETRNFKAWLLDQYGVLHDGKKPYPGAISTLKNLATAGAK 57

Query: 65  MVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHM 124
           +V+ISNSSRRASTT++KLK LGFDPS F GAITSGELTHQ L RRDD WFAALGRSCIHM
Sbjct: 58  IVIISNSSRRASTTMEKLKGLGFDPSYFTGAITSGELTHQSLQRRDDPWFAALGRSCIHM 117

Query: 125 TWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASK 184
           TW+DRGAISLEGL L VVENVEEADF+LAHGTE +GLPSG V P +L +LEKILE  A++
Sbjct: 118 TWNDRGAISLEGLDLNVVENVEEADFVLAHGTEALGLPSGSVSPRTLDELEKILEKSAAR 177

Query: 185 KIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDAC 244
            +PM+VANPDYVTVEA    +MPGTLASK+E+LGGEV+WMGKP K+IY+SA+A+ GV+ C
Sbjct: 178 GLPMIVANPDYVTVEANVFHIMPGTLASKYEELGGEVKWMGKPHKMIYESAIAIAGVNPC 237

Query: 245 DSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYP 304
           +SIAVGDSLHHDIKGAN +GI+S+FI GGIH  ELGL S+ E A L SV+ L +K++A+P
Sbjct: 238 ESIAVGDSLHHDIKGANVSGIESIFITGGIHGNELGLTSFDETASLDSVKALSAKHNAFP 297

Query: 305 SYVLPSFSW 313
           +YVL +F W
Sbjct: 298 TYVLSAFKW 306

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|19310550|gb|AAL85008.1| unknown protein [Arabidopsis thaliana]

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 217/309 (70%), Positives = 258/309 (83%), Gaps = 5/309 (1%)

Query: 5   CSVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAK 64
           CS Q     L Q +NGL+ I ETR FKAWLLDQ+GVLHDGKKPYPGAISTL+ LAT GAK
Sbjct: 13  CSSQ-----LSQPMNGLKDIVETRNFKAWLLDQYGVLHDGKKPYPGAISTLKNLATAGAK 67

Query: 65  MVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHM 124
           +V+ISNSSRRASTT++KLK LGFDPS F GAITSGELTHQ L RRDD WFAALGR CIH+
Sbjct: 68  IVIISNSSRRASTTMEKLKGLGFDPSFFTGAITSGELTHQSLQRRDDPWFAALGRRCIHI 127

Query: 125 TWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASK 184
           TW+DRGAISLEGL L VVENVEEADF+LAHGTE +GLPSG V P ++ +LEKILE  A++
Sbjct: 128 TWNDRGAISLEGLDLNVVENVEEADFVLAHGTEALGLPSGSVSPRTIDELEKILEKSAAR 187

Query: 185 KIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDAC 244
            +PM+VANPDYVTVEA    +MPGTLASK+E+LGGEV+ MGKP K+IY+SA+A+ GV+  
Sbjct: 188 GLPMIVANPDYVTVEANVFHIMPGTLASKYEELGGEVKSMGKPHKMIYESAIAIAGVNPS 247

Query: 245 DSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYP 304
           +SIAVGDSLHHDI+GAN +GI+S+FI GGIH  ELGL S+ E A L SV+TL +K++A+P
Sbjct: 248 ESIAVGDSLHHDIRGANVSGIESIFITGGIHGNELGLTSFDETASLDSVKTLTAKHNAFP 307

Query: 305 SYVLPSFSW 313
           +YVL +F W
Sbjct: 308 TYVLSAFKW 316

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42567769|ref|NP_196608.2| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gi|50198963|gb|AAT70484.1| At5g10460 [Arabidopsis thaliana] gi|332004162|gb|AED91545.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana]

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 217/309 (70%), Positives = 258/309 (83%), Gaps = 5/309 (1%)

Query: 5   CSVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAK 64
           CS Q     L Q +NGL+ I ETR FKAWLLDQ+GVLHDGKKPYPGAISTL+ LAT GAK
Sbjct: 3   CSSQ-----LSQPMNGLKDIVETRNFKAWLLDQYGVLHDGKKPYPGAISTLKNLATAGAK 57

Query: 65  MVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHM 124
           +V+ISNSSRRASTT++KLK LGFDPS F GAITSGELTHQ L RRDD WFAALGR CIH+
Sbjct: 58  IVIISNSSRRASTTMEKLKGLGFDPSFFTGAITSGELTHQSLQRRDDPWFAALGRRCIHI 117

Query: 125 TWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASK 184
           TW+DRGAISLEGL L VVENVEEADF+LAHGTE +GLPSG V P ++ +LEKILE  A++
Sbjct: 118 TWNDRGAISLEGLDLNVVENVEEADFVLAHGTEALGLPSGSVSPRTIDELEKILEKSAAR 177

Query: 185 KIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDAC 244
            +PM+VANPDYVTVEA    +MPGTLASK+E+LGGEV+ MGKP K+IY+SA+A+ GV+  
Sbjct: 178 GLPMIVANPDYVTVEANVFHIMPGTLASKYEELGGEVKSMGKPHKMIYESAIAIAGVNPS 237

Query: 245 DSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYP 304
           +SIAVGDSLHHDI+GAN +GI+S+FI GGIH  ELGL S+ E A L SV+TL +K++A+P
Sbjct: 238 ESIAVGDSLHHDIRGANVSGIESIFITGGIHGNELGLTSFDETASLDSVKTLTAKHNAFP 297

Query: 305 SYVLPSFSW 313
           +YVL +F W
Sbjct: 298 TYVLSAFKW 306

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	313
TAIR|locus:2142454	306	AT5G10460 "AT5G10460" [Arabido	0.958	0.980	0.713	4.4e-116
TIGR_CMR|SPO_3151	310	SPO_3151 "HAD-superfamily subf	0.932	0.941	0.266	4.8e-23
UNIPROTKB|F1MW60	296	PDXP "Pyridoxal phosphate phos	0.757	0.800	0.268	8.4e-08
UNIPROTKB|Q3ZBF9	296	PDXP "Pyridoxal phosphate phos	0.757	0.800	0.268	8.4e-08
UNIPROTKB|Q81XP1	254	BAS4827 "Phosphatase,haloacid	0.383	0.472	0.264	2.8e-07
TIGR_CMR|BA_5192	254	BA_5192 "phosphatase,haloacid	0.383	0.472	0.264	2.8e-07
UNIPROTKB|J9NUR4	296	PDXP "Uncharacterized protein"	0.757	0.800	0.275	4.2e-07
UNIPROTKB|Q96GD0	296	PDXP "Pyridoxal phosphate phos	0.757	0.800	0.256	5.5e-07
POMBASE|SPBC15D4.15	298	pho2 "4-nitrophenylphosphatase	0.840	0.882	0.235	7.2e-07
RGD|1586212	309	Pdxp "pyridoxal (pyridoxine, v	0.252	0.255	0.357	1.1e-06

TAIR|locus:2142454 AT5G10460 "AT5G10460" [Arabidopsis thaliana (taxid:3702)]

 Score = 1144 (407.8 bits), Expect = 4.4e-116, P = 4.4e-116
 Identities = 214/300 (71%), Positives = 255/300 (85%)

Query:    14 LFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSR 73
             L Q +NGL+ I ETR FKAWLLDQ+GVLHDGKKPYPGAISTL+ LAT GAK+V+ISNSSR
Sbjct:     7 LSQPMNGLKDIVETRNFKAWLLDQYGVLHDGKKPYPGAISTLKNLATAGAKIVIISNSSR 66

Query:    74 RASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAIS 133
             RASTT++KLK LGFDPS F GAITSGELTHQ L RRDD WFAALGR CIH+TW+DRGAIS
Sbjct:    67 RASTTMEKLKGLGFDPSFFTGAITSGELTHQSLQRRDDPWFAALGRRCIHITWNDRGAIS 126

Query:   134 LEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANP 193
             LEGL L VVENVEEADF+LAHGTE +GLPSG V P ++ +LEKILE  A++ +PM+VANP
Sbjct:   127 LEGLDLNVVENVEEADFVLAHGTEALGLPSGSVSPRTIDELEKILEKSAARGLPMIVANP 186

Query:   194 DYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSL 253
             DYVTVEA    +MPGTLASK+E+LGGEV+ MGKP K+IY+SA+A+ GV+  +SIAVGDSL
Sbjct:   187 DYVTVEANVFHIMPGTLASKYEELGGEVKSMGKPHKMIYESAIAIAGVNPSESIAVGDSL 246

Query:   254 HHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFSW 313
             HHDI+GAN +GI+S+FI GGIH  ELGL S+ E A L SV+TL +K++A+P+YVL +F W
Sbjct:   247 HHDIRGANVSGIESIFITGGIHGNELGLTSFDETASLDSVKTLTAKHNAFPTYVLSAFKW 306

GO:0016787 "hydrolase activity" evidence=ISS

GO:0009507 "chloroplast" evidence=IDA

TIGR_CMR|SPO_3151 SPO_3151 "HAD-superfamily subfamily IIA hydrolase, TIGR01459" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 83/312 (26%), Positives = 143/312 (45%)

Query:     3 AKCSVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG 62
             A  +V   DP + Q +  L  I+E  R++A  +D +G +H+G   YP A++ L+     G
Sbjct:     9 ALATVSKPDPDMTQIITALAEISE--RYRALFVDLWGCVHNGVTAYPEAVAALQAYRAAG 66

Query:    63 AKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCI 122
               +V+++NS +  +    +L         +    TSG+     + R       A+G+   
Sbjct:    67 GIVVLVTNSPKPRAGVATQLSQFKVPQDAYDTIATSGDSARSAMFR------GAVGQKVY 120

Query:   123 HMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICA 182
              M   +R A   E L  K++++  E   +     EG+ +  G   PM+   + +   + A
Sbjct:   121 FMGEWERDAGFFEPL--KLLDSPVEITRVPLQEAEGI-VCCGPFDPMADPAVNRPDFLYA 177

Query:   183 SKK-IPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSA---MAM 238
               K + ++ ANPD V           G LA  + ++GGE  + GKP   IY  A   +  
Sbjct:   178 KTKGMKLLCANPDIVVDRGEIREWCAGALARLYTEMGGESLYFGKPHPPIYDLARRRLLS 237

Query:   239 VGVDACDS--IAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTL 296
             +G D  DS  +A+GD +  DI G    GI S+FI GG+ A+E      G   D +++   
Sbjct:   238 LGADIADSEILAIGDGIQTDIAGGQGEGIDSLFISGGLAASET---KTGHSPDPAALTAY 294

Query:   297 VSKYDAYPSYVL 308
             + + +  P+Y +
Sbjct:   295 LDRENRMPTYTI 306

GO:0008152 "metabolic process" evidence=ISS

GO:0016787 "hydrolase activity" evidence=ISS

UNIPROTKB|F1MW60 PDXP "Pyridoxal phosphate phosphatase" [Bos taurus (taxid:9913)]

 Score = 146 (56.5 bits), Expect = 8.4e-08, P = 8.4e-08
 Identities = 70/261 (26%), Positives = 109/261 (41%)

Query:    29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
             R +  L D  GVL +G++  PGA   LE LA  G   + +SN+SRRA   +  +   LGF
Sbjct:    18 RAQGVLFDCDGVLWNGERAVPGAPELLERLAQAGKATLFVSNNSRRARPELALRFARLGF 77

Query:    88 ----DPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVE 143
                    LF+ A+ +  L  Q LL   D       +  + +   +     L   GL++  
Sbjct:    78 GGLRSEQLFSSALCAARLLRQRLLGPPDT------QGAVFVLGGEGLRAELRAAGLRLAG 131

Query:   144 NVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIP---MVVANPDYVTVEA 200
             +  E D   A     + L   D          K+ E CA  + P   +V  + D     +
Sbjct:   132 DPSE-DPGAAPRVRAV-LVGYDEH----FSFAKLSEACAHLRDPDCLLVATDRDPWHPLS 185

Query:   201 RALRVMPGT--LASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDI 257
                R  PGT  LA+  E   G +   +GKP   +++       VD   ++ VGD L  DI
Sbjct:   186 DGSRT-PGTGSLAAAVETASGRQALVVGKPSPYMFECITEHFSVDPGRTLMVGDRLETDI 244

Query:   258 KGANAAGIQSVFIIGGIHATE 278
                +  G+ +V  + G+ + E
Sbjct:   245 LFGHRCGMTTVLTLTGVSSLE 265

GO:0071318 "cellular response to ATP" evidence=IEA

GO:0070938 "contractile ring" evidence=IEA

GO:0032587 "ruffle membrane" evidence=IEA

GO:0032465 "regulation of cytokinesis" evidence=IEA

GO:0032154 "cleavage furrow" evidence=IEA

GO:0031247 "actin rod assembly" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0030836 "positive regulation of actin filament depolymerization" evidence=IEA

GO:0030496 "midbody" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0007088 "regulation of mitosis" evidence=IEA

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA

UNIPROTKB|Q3ZBF9 PDXP "Pyridoxal phosphate phosphatase" [Bos taurus (taxid:9913)]

 Score = 146 (56.5 bits), Expect = 8.4e-08, P = 8.4e-08
 Identities = 70/261 (26%), Positives = 109/261 (41%)

Query:    29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
             R +  L D  GVL +G++  PGA   LE LA  G   + +SN+SRRA   +  +   LGF
Sbjct:    18 RAQGVLFDCNGVLWNGERAVPGAPELLERLAQAGKATLFVSNNSRRARPELALRFARLGF 77

Query:    88 ----DPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVE 143
                    LF+ A+ +  L  Q LL   D       +  + +   +     L   GL++  
Sbjct:    78 GGLRSEQLFSSALCAARLLRQRLLGPPDT------QGAVFVLGGEGLRAELRAAGLRLAG 131

Query:   144 NVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIP---MVVANPDYVTVEA 200
             +  E D   A     + L   D          K+ E CA  + P   +V  + D     +
Sbjct:   132 DPSE-DPGAAPRVRAV-LVGYDEH----FSFAKLSEACAHLRDPDCLLVATDRDPWHPLS 185

Query:   201 RALRVMPGT--LASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDI 257
                R  PGT  LA+  E   G +   +GKP   +++       VD   ++ VGD L  DI
Sbjct:   186 DGSRT-PGTGSLAAAVETASGRQALVVGKPSPYMFECITEHFSVDPGRTLMVGDRLETDI 244

Query:   258 KGANAAGIQSVFIIGGIHATE 278
                +  G+ +V  + G+ + E
Sbjct:   245 LFGHRCGMTTVLTLTGVSSLE 265

GO:0007088 "regulation of mitosis" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0015629 "actin cytoskeleton" evidence=ISS

GO:0030027 "lamellipodium" evidence=ISS

GO:0030496 "midbody" evidence=ISS

GO:0032154 "cleavage furrow" evidence=ISS

GO:0032587 "ruffle membrane" evidence=ISS

GO:0070938 "contractile ring" evidence=ISS

GO:0032465 "regulation of cytokinesis" evidence=ISS

GO:0030836 "positive regulation of actin filament depolymerization" evidence=ISS

GO:0006470 "protein dephosphorylation" evidence=IDA

GO:0004721 "phosphoprotein phosphatase activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0031258 "lamellipodium membrane" evidence=IEA

GO:0033883 "pyridoxal phosphatase activity" evidence=IEA

GO:0004647 "phosphoserine phosphatase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q81XP1 BAS4827 "Phosphatase,haloacid dehalogenase family" [Bacillus anthracis (taxid:1392)]

 Score = 102 (41.0 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
 Identities = 33/125 (26%), Positives = 58/125 (46%)

Query:   175 EKILEICASKK--IPMVVANPDYVTVEARALRVMPGTLASKFE-KLGGEVRWMGKPDKII 231
             EK+ + C + +     +  N D      R L    G+L S      G +  ++GKP+ II
Sbjct:   125 EKLAKACLAVRNGATFISTNGDIAIPTERGLLPGNGSLTSVVAVSTGVDPIFIGKPESII 184

Query:   232 YKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLS 291
              + A+ ++G++  +++ VGD+   DI     AG+ ++ +  G+   E  L  Y EV    
Sbjct:   185 MEQALKVLGIEKNEALIVGDNYDTDILAGINAGMHTLLVHTGVTTVEK-LTEY-EVQPTQ 242

Query:   292 SVQTL 296
              V  L
Sbjct:   243 VVHNL 247

GO:0008150 "biological_process" evidence=ND

GO:0016311 "dephosphorylation" evidence=ISS

GO:0016791 "phosphatase activity" evidence=ISS

TIGR_CMR|BA_5192 BA_5192 "phosphatase,haloacid dehalogenase family" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 102 (41.0 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
 Identities = 33/125 (26%), Positives = 58/125 (46%)

Query:   175 EKILEICASKK--IPMVVANPDYVTVEARALRVMPGTLASKFE-KLGGEVRWMGKPDKII 231
             EK+ + C + +     +  N D      R L    G+L S      G +  ++GKP+ II
Sbjct:   125 EKLAKACLAVRNGATFISTNGDIAIPTERGLLPGNGSLTSVVAVSTGVDPIFIGKPESII 184

Query:   232 YKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLS 291
              + A+ ++G++  +++ VGD+   DI     AG+ ++ +  G+   E  L  Y EV    
Sbjct:   185 MEQALKVLGIEKNEALIVGDNYDTDILAGINAGMHTLLVHTGVTTVEK-LTEY-EVQPTQ 242

Query:   292 SVQTL 296
              V  L
Sbjct:   243 VVHNL 247

GO:0008150 "biological_process" evidence=ND

GO:0016791 "phosphatase activity" evidence=ISS

UNIPROTKB|J9NUR4 PDXP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 140 (54.3 bits), Expect = 4.2e-07, P = 4.2e-07
 Identities = 72/261 (27%), Positives = 111/261 (42%)

Query:    29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
             R +  L D  GVL +G++  PGA   LE LA  G   + +SN+SRRA   +  +   LGF
Sbjct:    18 RTQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGF 77

Query:    88 D----PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVE 143
                    +F+ A+ +  L  Q LLR      AA G   + +   +     L   GL++  
Sbjct:    78 GGLRAEQVFSSALCAARLLRQRLLRPP----AAPG--AVFVLGGEGLRAELRAAGLRLAG 131

Query:   144 NVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIP---MVVANPDYVTVEA 200
             +  E D   A     + L   D    S     K+ E CA  + P   +V  + D     +
Sbjct:   132 DPGE-DPGAAPRVRAV-LVGYDEH-FSFA---KLSEACAHLRDPDCLLVATDRDPWHPLS 185

Query:   201 RALRVMPGT--LASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDI 257
                R  PGT  LA+  E   G +   +GKP   +++       VD   ++ VGD L  DI
Sbjct:   186 DGSRT-PGTGSLAAAVEIASGRQALVVGKPSPYMFECITEHFSVDPARTLMVGDRLETDI 244

Query:   258 KGANAAGIQSVFIIGGIHATE 278
                +  G+ ++  + G+   E
Sbjct:   245 LFGHRCGMTTLLTLTGVSRLE 265

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|Q96GD0 PDXP "Pyridoxal phosphate phosphatase" [Homo sapiens (taxid:9606)]

 Score = 139 (54.0 bits), Expect = 5.5e-07, P = 5.5e-07
 Identities = 67/261 (25%), Positives = 105/261 (40%)

Query:    29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
             R +  L D  GVL +G++  PGA   LE LA  G   + +SN+SRRA   +  +   LGF
Sbjct:    18 RAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGF 77

Query:    88 D----PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVE 143
                    LF+ A+ +  L  Q L    DA         + +   +     L   GL++  
Sbjct:    78 GGLRAEQLFSSALCAARLLRQRLPGPPDA------PGAVFVLGGEGLRAELRAAGLRLAG 131

Query:   144 NVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIP---MVVANPDYVTVEA 200
             +    D           +  G     S     K+ E CA  + P   +V  + D     +
Sbjct:   132 DPSAGD---GAAPRVRAVLVGYDEHFSFA---KLREACAHLRDPECLLVATDRDPWHPLS 185

Query:   201 RALRVMPGT--LASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDI 257
                R  PGT  LA+  E   G +   +GKP   +++       +D   ++ VGD L  DI
Sbjct:   186 DGSRT-PGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDI 244

Query:   258 KGANAAGIQSVFIIGGIHATE 278
                +  G+ +V  + G+   E
Sbjct:   245 LFGHRCGMTTVLTLTGVSRLE 265

GO:0046872 "metal ion binding" evidence=IEA

GO:0004647 "phosphoserine phosphatase activity" evidence=IEA

GO:0033883 "pyridoxal phosphatase activity" evidence=IEA

GO:0031258 "lamellipodium membrane" evidence=IEA

GO:0006470 "protein dephosphorylation" evidence=IDA

GO:0004721 "phosphoprotein phosphatase activity" evidence=IDA

GO:0030836 "positive regulation of actin filament depolymerization" evidence=IMP

GO:0015629 "actin cytoskeleton" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0030027 "lamellipodium" evidence=IDA

GO:0032587 "ruffle membrane" evidence=IDA

GO:0030496 "midbody" evidence=IDA

GO:0070938 "contractile ring" evidence=IDA

GO:0032154 "cleavage furrow" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0032465 "regulation of cytokinesis" evidence=IMP

GO:0007088 "regulation of mitosis" evidence=IMP

GO:0031072 "heat shock protein binding" evidence=IDA

GO:0031247 "actin rod assembly" evidence=IDA

GO:0071318 "cellular response to ATP" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

POMBASE|SPBC15D4.15 pho2 "4-nitrophenylphosphatase" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 138 (53.6 bits), Expect = 7.2e-07, P = 7.2e-07
 Identities = 66/280 (23%), Positives = 118/280 (42%)

Query:    29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT-IDKLKSLGF 87
             +F  +L D  GVL  G KP PG   T+++L + G +++ +SN+S ++  T ++K+   G 
Sbjct:    17 KFDVFLFDCDGVLWSGSKPIPGVTDTMKLLRSLGKQIIFVSNNSTKSRETYMNKINEHGI 76

Query:    88 DPSL---FAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGL--GLKVV 142
                L   +  A +S     + L    D     LG + I       G   + G    L+  
Sbjct:    77 AAKLEEIYPSAYSSATYVKKVLKLPADKKVFVLGEAGIEDELDRVGVAHIGGTDPSLRRA 136

Query:   143 ENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARA 202
                E+ + I    + G  L   D+    L+      +         ++ N D  T     
Sbjct:   137 LASEDVEKIGPDPSVGAVLCGMDMHVTYLKYC-MAFQYLQDPNCAFLLTNQDS-TFPTNG 194

Query:   203 LRVMPGTLASKFEKL---GGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDI-- 257
              + +PG+ A  +  +   G + + +GKP   + ++ +A V  D   +  VGD L+ DI  
Sbjct:   195 -KFLPGSGAISYPLIFSTGRQPKILGKPYDEMMEAIIANVNFDRKKACFVGDRLNTDIQF 253

Query:   258 -KGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTL 296
              K +N  G  S+ ++ G+   E  L+    V     V++L
Sbjct:   254 AKNSNLGG--SLLVLTGVSKEEEILEKDAPVVPDYYVESL 291

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0003869 "4-nitrophenylphosphatase activity" evidence=IDA

GO:0004035 "alkaline phosphatase activity" evidence=ISO

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006470 "protein dephosphorylation" evidence=ISO

GO:0006796 "phosphate-containing compound metabolic process" evidence=IC

GO:0008270 "zinc ion binding" evidence=IDA

GO:0046196 "4-nitrophenol catabolic process" evidence=IDA

GO:0046983 "protein dimerization activity" evidence=IDA

GO:0065007 "biological regulation" evidence=NAS

RGD|1586212 Pdxp "pyridoxal (pyridoxine, vitamin B6) phosphatase" [Rattus norvegicus (taxid:10116)]

 Score = 99 (39.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
 Identities = 30/84 (35%), Positives = 42/84 (50%)

Query:    34 LLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGFD---- 88
             L D  GVL +G++  PGA   L+ LA  G   + +SN+SRRA   +  +   LGF     
Sbjct:    23 LFDCDGVLWNGERIVPGAPELLQRLAQAGKATLFVSNNSRRARPELALRFARLGFTGLRA 82

Query:    89 PSLFAGAITSGELTHQYLLRRDDA 112
               LF+ A+ +  L  Q L    DA
Sbjct:    83 EELFSSAVCAARLLRQRLPGPPDA 106

GO:0004647 "phosphoserine phosphatase activity" evidence=IEA

GO:0004721 "phosphoprotein phosphatase activity" evidence=ISO;ISS

GO:0005829 "cytosol" evidence=ISO;ISS

GO:0005886 "plasma membrane" evidence=ISO;ISS

GO:0006470 "protein dephosphorylation" evidence=ISO;ISS

GO:0007088 "regulation of mitosis" evidence=ISO;ISS

GO:0015629 "actin cytoskeleton" evidence=ISO;ISS

GO:0016791 "phosphatase activity" evidence=IEA

GO:0030027 "lamellipodium" evidence=ISO;ISS

GO:0030496 "midbody" evidence=ISO;ISS

GO:0030836 "positive regulation of actin filament depolymerization" evidence=ISO;ISS

GO:0031072 "heat shock protein binding" evidence=IEA;ISO

GO:0031247 "actin rod assembly" evidence=IEA;ISO

GO:0031258 "lamellipodium membrane" evidence=IEA

GO:0032154 "cleavage furrow" evidence=ISO;ISS

GO:0032465 "regulation of cytokinesis" evidence=ISO;ISS

GO:0032587 "ruffle membrane" evidence=ISO;ISS

GO:0033883 "pyridoxal phosphatase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0070938 "contractile ring" evidence=ISO;ISS

GO:0071318 "cellular response to ATP" evidence=IEA;ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	313
TIGR01459	242	TIGR01459, HAD-SF-IIA-hyp4, HAD-superfamily class	9e-45
COG0647	269	COG0647, NagD, Predicted sugar phosphatases of the	6e-39
TIGR01460	236	TIGR01460, HAD-SF-IIA, Haloacid Dehalogenase Super	2e-24
pfam13344	101	pfam13344, Hydrolase_6, Haloacid dehalogenase-like	1e-16
pfam13242	74	pfam13242, Hydrolase_like, HAD-hyrolase-like	3e-11
TIGR01452	279	TIGR01452, PGP_euk, phosphoglycolate/pyridoxal pho	1e-09
TIGR01457	249	TIGR01457, HAD-SF-IIA-hyp2, HAD-superfamily subfam	2e-08
COG1011	229	COG1011, COG1011, Predicted hydrolase (HAD superfa	2e-08
cd01427	139	cd01427, HAD_like, Haloacid dehalogenase-like hydr	1e-07
TIGR01458	257	TIGR01458, HAD-SF-IIA-hyp3, HAD-superfamily subfam	4e-06
TIGR02253	221	TIGR02253, CTE7, HAD superfamily (subfamily IA) hy	7e-06
pfam13419	176	pfam13419, HAD_2, Haloacid dehalogenase-like hydro	1e-05
TIGR02252	203	TIGR02252, DREG-2, REG-2-like, HAD superfamily (su	5e-05
cd01427	139	cd01427, HAD_like, Haloacid dehalogenase-like hydr	6e-05
TIGR02253	221	TIGR02253, CTE7, HAD superfamily (subfamily IA) hy	9e-05
pfam00702	187	pfam00702, Hydrolase, haloacid dehalogenase-like h	9e-05
PRK09449	224	PRK09449, PRK09449, dUMP phosphatase; Provisional	1e-04
COG0546	220	COG0546, Gph, Predicted phosphatases [General func	2e-04
TIGR01509	177	TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup	7e-04
PRK10444	248	PRK10444, PRK10444, UMP phosphatase; Provisional	9e-04
TIGR02254	224	TIGR02254, YjjG/YfnB, HAD superfamily (subfamily I	0.002
PLN02645	311	PLN02645, PLN02645, phosphoglycolate phosphatase	0.003
COG0637	221	COG0637, COG0637, Predicted phosphatase/phosphohex	0.003
COG0637	221	COG0637, COG0637, Predicted phosphatase/phosphohex	0.004

>gnl|CDD|130526 TIGR01459, HAD-SF-IIA-hyp4, HAD-superfamily class IIA hydrolase, TIGR01459

 Score =  152 bits (385), Expect = 9e-45
 Identities = 69/246 (28%), Positives = 109/246 (44%), Gaps = 12/246 (4%)

Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88
            +  +LLD +GV+ DG   YPGA+  L  +   G  +  +SNS R   +    LKSLG +
Sbjct: 7   DYDVFLLDLWGVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66

Query: 89  PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCI-HMTWSDRGAISLEGLGLKVVENVEE 147
             L    I+SGE+  Q +L  +      +    I  +   +   I+L        EN   
Sbjct: 67  ADLPEMIISSGEIAVQMIL--ESKKRFDIRNGIIYLLGHLENDIINLMQCYTTDDENKAN 124

Query: 148 ADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMP 207
           A  I  + +E   L         L + +++     ++KIP + ANPD    +    R   
Sbjct: 125 ASLITIYRSENEKLD--------LDEFDELFAPIVARKIPNICANPDRGINQHGIYRYGA 176

Query: 208 GTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA-VGDSLHHDIKGANAAGIQ 266
           G  A   ++LGG+V + GKP   I+  A+        + +  VGDS + DI GAN  GI 
Sbjct: 177 GYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGID 236

Query: 267 SVFIIG 272
           +  ++ 
Sbjct: 237 TALVLT 242

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily model). Length = 242

>gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

 Score =  137 bits (348), Expect = 6e-39
 Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 37/288 (12%)

Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRR-ASTTIDKLKSLGF 87
           ++  +L D  GVL+ G +  PGA   L+ L   G  ++ ++N+S R       +L SLG 
Sbjct: 7   KYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGG 66

Query: 88  DPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHM-TWSDRGAISLEGLGLKVVENVE 146
                   +TSG+ T  YL +         G+    +     +  +   G  L   E   
Sbjct: 67  VDVTPDDIVTSGDATADYLAK------QKPGKKVYVIGEEGLKEELEGAGFELVDEEEPA 120

Query: 147 EADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVM 206
             D ++           G  R ++ + L + L   A    P +  NPD      R LR  
Sbjct: 121 RVDAVVV----------GLDRTLTYEKLAEALLAIA-AGAPFIATNPDLTVPTERGLRPG 169

Query: 207 PGTLASKFEKLGGEVR-WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGI 265
            G +A+  E+  G     +GKP   IY++A+  +G+D  + + VGD L  DI GA AAG+
Sbjct: 170 AGAIAALLEQATGREPTVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGL 229

Query: 266 QSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFSW 313
            ++ ++ G+ +                    + + +  P+YV+ S + 
Sbjct: 230 DTLLVLTGVSS-----------------AEDLDRAEVKPTYVVDSLAE 260

Length = 269

>gnl|CDD|233422 TIGR01460, HAD-SF-IIA, Haloacid Dehalogenase Superfamily Class (subfamily) IIA

 Score = 98.6 bits (246), Expect = 2e-24
 Identities = 67/245 (27%), Positives = 104/245 (42%), Gaps = 15/245 (6%)

Query: 34  LLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTI-DKLKSLGFDPSLF 92
           L D  GVL  G KP PGA   L  L   G  +V ++N+S R+     +KL SL       
Sbjct: 2   LFDIDGVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSP 61

Query: 93  AGAITSGELTHQYLLRR-DDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFI 151
              ITSG +T   L +R +      +G              SLEGLG +  +  ++ D +
Sbjct: 62  DQIITSGSVTKDLLRQRFEGEKVYVIG--------VGELRESLEGLGFR-NDFFDDIDHL 112

Query: 152 LAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEAR-ALRVMPGTL 210
                    +        S  +L K   + A   +P + AN D +        R   G +
Sbjct: 113 AIEKIPAAVIVGEPSDF-SYDELAKAAYLLAEGDVPFIAANRDDLVRLGDGRFRPGAGAI 171

Query: 211 ASKFEKLGGEVR-WMGKPDKIIYKSAMAMVGVDACDS-IAVGDSLHHDIKGANAAGIQSV 268
           A+  ++L G     +GKP   IY++A+ ++        + VGD+L  DI GA  AG  ++
Sbjct: 172 AAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTL 231

Query: 269 FIIGG 273
            ++ G
Sbjct: 232 LVLTG 236

This model represents one structural subclass of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The classes are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Class I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Class II consists of sequences in which the capping domain is found between the second and third motifs. Class III sequences have no capping domain in iether of these positions. The Class IIA capping domain is predicted by PSI-PRED to consist of a mixed alpha-beta fold with the basic pattern: Helix-Helix-Helix-Sheet-Helix-Loop-Sheet-Helix-Sheet- Helix. Presently, this subfamily encompasses a single equivalog model (TIGR01452) for the eukaryotic phosphoglycolate phosphatase, as well as four hypothetical equivalogs covering closely related sequences (TIGR01456 and TIGR01458 in eukaryotes, TIGR01457 in gram positive bacteria and TIGR01459 in gram negative bacteria). The Escherishia coli NagD gene and the Bacillus subtilus AraL gene are members of this subfamily but are not members of the any of the presently defined equivalogs within it. NagD is part of the NAG operon responsible for N-acetylglucosamine metabolism. The function of this gene is unknown. Genes from several organisms have been annotated as NagD, or NagD-like. However, without data on the presence of other members of this pathway, (such as in the case of Yersinia pestis) these assignments should not be given great weight. The AraL gene is similar: it is part of the L-arabinose operon, but the function is unknown. A gene from Halobacterium has been annotated as AraL, but no other Ara operon genes have been annotated. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant [Unknown function, Enzymes of unknown specificity]. Length = 236

>gnl|CDD|205524 pfam13344, Hydrolase_6, Haloacid dehalogenase-like hydrolase

 Score = 74.0 bits (183), Expect = 1e-16
 Identities = 33/109 (30%), Positives = 45/109 (41%), Gaps = 9/109 (8%)

Query: 33  WLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRA-STTIDKLKSLGFDPSL 91
           +L D  GVL  G +P PGA   L  L   G  +V ++N+S R+      KL+ LGFD   
Sbjct: 1   FLFDVDGVLWRGGEPIPGAAEALNALRAAGKPVVFVTNNSSRSREQYAKKLRKLGFDVD- 59

Query: 92  FAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLK 140
               ITS      YL  R            + +  S+     LE  G +
Sbjct: 60  EDEVITSATAAADYLKER-------KFGKKVLVIGSEGLREELEEAGFE 101

This family is part of the HAD superfamily. Length = 101

>gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like

 Score = 58.1 bits (141), Expect = 3e-11
 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)

Query: 224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDS 283
            GKP+  + ++A+  +GVD  + + +GDS   DI  A AAGI+++ ++ G+   E  L+ 
Sbjct: 2   CGKPNPGMLRAALERLGVDPEECVMIGDS-DTDILAARAAGIRTILVLTGVTTAED-LER 59

Query: 284 YGEVADL 290
                D 
Sbjct: 60  APGRPDY 66

Length = 74

>gnl|CDD|233420 TIGR01452, PGP_euk, phosphoglycolate/pyridoxal phosphate phosphatase family

 Score = 58.0 bits (140), Expect = 1e-09
 Identities = 64/297 (21%), Positives = 114/297 (38%), Gaps = 37/297 (12%)

Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRA-STTIDKLKSLGF 87
           R + ++ D  GVL  G++  PGA   L+ LA  G   + ++N+S ++ +    K   LGF
Sbjct: 1   RAQGFIFDCDGVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGF 60

Query: 88  DPS---LFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVEN 144
           +     LF+ A+ +  L  Q            +G   +           L+  G+++  +
Sbjct: 61  NGLAEQLFSSALCAARLLRQPPD--APKAVYVIGEEGLRA--------ELDAAGIRLAGD 110

Query: 145 VEEADFILAHGTEGMGLPSGDVRPMSLQ-----DLEKILEICASKKIP---MVVANPDYV 196
               D     G+        +V  + +         K+ E CA  + P    V  N D  
Sbjct: 111 PSAGDGAAPRGSGAFMKLEENVGAVVVGYDEHFSYAKLREACAHLREPGCLFVATNRDPW 170

Query: 197 TVEARALRVMPGT--LASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSL 253
              +   R  PGT  L +  E   G +   +GKP   +++       +D   ++ VGD L
Sbjct: 171 HPLSDGSRT-PGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPARTLMVGDRL 229

Query: 254 HHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPS 310
             DI   +  G+ +V ++ G+   E          +         ++D  P YV+ S
Sbjct: 230 ETDILFGHRCGMTTVLVLSGVSRLE----------EAQEYL-AAGQHDLVPDYVVES 275

PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In mammals, PGP is found in many tissues, notably in red blood cells where P-glycolate is and important activator of the hydrolysis of 2,3-bisphosphoglycerate, a major modifier of the oxygen affinity of hemoglobin. Pyridoxal phosphate (PLP, Vitamin B6) phosphatase is involved in the degradation of PLP in mammals and is widely distributed in human tissues including erythrocyes. The enzymes described here are members of the Haloacid dehalogenase superfamily of hydrolase enzymes (pfam00702). Unlike the bacterial PGP equivalog (TIGR01449), which is a member of class (subfamily) I, these enzymes are members of class (subfamily) II. These two families have almost certainly arisen from convergent evolution (although these two ancestors may themselves have diverged from a more distant HAD superfamily progenitor). The primary seed sequence for this model comes from Chlamydomonas reinhardtii, a photosynthetic alga. The enzyme has been purified and characterized and these data are fully consistent with the assignment of function as a PGPase involved in photorespiration. The second seed, from Homo sapiens chromosome 22 has been characterized as a pyridoxal phosphatase. Biochemical characterization of partially purified PGP's from various tissues including red blood cells have been performed while one gene for PGP has been localized to chromosome 16p13.3. The sequence used here maps to chromosome 22. There is indeed a related gene on chromosome 16 (and it is expressed, since EST's are found) which shows 46% identity and 59% positives by BLAST2 (E=1e-66). The chromosome 16 gene is not in evidence in nraa but translated from the genomic sequence would score 372.4 (E=7.9e-113) versus This model, well above trusted. The third seed, from C. elegans, is only supported by sequence similarity. This model is limited to eukaryotic species including S. pombe and S. cerevisiae, although several archaea score between the trusted and noise cutoffs. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase d. Length = 279

>gnl|CDD|130524 TIGR01457, HAD-SF-IIA-hyp2, HAD-superfamily subfamily IIA hydrolase, TIGR01457

 Score = 53.7 bits (129), Expect = 2e-08
 Identities = 62/254 (24%), Positives = 102/254 (40%), Gaps = 29/254 (11%)

Query: 30  FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAK-MVVISNSSRRASTTIDKLKSLGFD 88
           +K +L+D  G +++G +    A   +  L   G   + V +NS+R      DKL S    
Sbjct: 1   YKGYLIDLDGTMYNGTEKIEEACEFVRTLKKRGVPYLFVTNNSTRTPEQVADKLVSFDIP 60

Query: 89  PSLFAGAITSGELTHQYLLR-RDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEE 147
            +      T+   T QY+ + + DA    +G   +      R AI   GL        E 
Sbjct: 61  ATE-EQVFTTSMATAQYIAQQKKDASVYVIGEEGL------REAIKENGL----TFGGEN 109

Query: 148 ADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICAS--KKIPMVVANPDYVTVEARALRV 205
            D+++      +GL             EK    C +       +  N D      R L  
Sbjct: 110 PDYVV------VGLDRS-------ITYEKFAVACLAIRNGARFISTNGDIAIPTERGLLP 156

Query: 206 MPGTLASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAG 264
             G+L S      G +  ++GKP+ II + AM ++G D  +++ VGD+   DI     AG
Sbjct: 157 GNGSLTSVLTVSTGVKPVFIGKPESIIMEQAMRVLGTDVEETLMVGDNYATDIMAGINAG 216

Query: 265 IQSVFIIGGIHATE 278
           I ++ +  G+   E
Sbjct: 217 IDTLLVHTGVTKRE 230

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in This model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those [Unknown function, Enzymes of unknown specificity]. Length = 249

>gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]

 Score = 53.4 bits (128), Expect = 2e-08
 Identities = 41/197 (20%), Positives = 71/197 (36%), Gaps = 25/197 (12%)

Query: 85  LGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVEN 144
           L FD + F   +       +  +       A L           RG  + E         
Sbjct: 16  LDFDSAEFRAVL---AEFAEIGVPETLEELALLKLIEKLEARFLRGEYTGE-------YG 65

Query: 145 VEEADFILAHGTEGMGLPSGDVR------PMSLQDLEKILEICAS--KKIPMVVA-NPDY 195
           +     +           +  V          L D  + LE      KK  + +  N   
Sbjct: 66  LTLERLLELLERLLGDEDAELVEELLAALAKLLPDYPEALEALKELGKKYKLGILTNGAR 125

Query: 196 VTVEARALRVMPGTLASKFEKL--GGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSL 253
              E +  ++    L   F+ +    +V  + KPD  I++ A+  +GV   +++ VGDSL
Sbjct: 126 PHQERKLRQL---GLLDYFDAVFISEDVG-VAKPDPEIFEYALEKLGVPPEEALFVGDSL 181

Query: 254 HHDIKGANAAGIQSVFI 270
            +DI GA A G+++V+I
Sbjct: 182 ENDILGARALGMKTVWI 198

Length = 229

>gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases

 Score = 50.1 bits (120), Expect = 1e-07
 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)

Query: 212 SKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFI 270
            +   LGG    +GKP+     +A+ ++GVD  + + VGDSL +DI+ A AAG   V +
Sbjct: 82  KEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSL-NDIEMAKAAGGLGVAV 139

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139

>gnl|CDD|162372 TIGR01458, HAD-SF-IIA-hyp3, HAD-superfamily subfamily IIA hydrolase, TIGR01458

 Score = 46.8 bits (111), Expect = 4e-06
 Identities = 56/261 (21%), Positives = 100/261 (38%), Gaps = 54/261 (20%)

Query: 31  KAWLLDQFGVLHD----GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTI-DKLKSL 85
           K  LLD  GVL+     G    PG+   ++ L     K+  ++N+++ +   + ++L+ L
Sbjct: 2   KGVLLDISGVLYISDAGGGTAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRL 61

Query: 86  GFDPS---LFAGAITSGELTHQ-----YLLRRDDA--WFAALGRS---CIHMTWSDRGAI 132
           GFD S   +F  A  + +L  +      LL  D     F  +  S   C+ M       +
Sbjct: 62  GFDISEDEVFTPAPAARQLLEEKQLRPMLLVDDRVLPDFDGIDTSDPNCVVM------GL 115

Query: 133 SLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVAN 192
           + E    +++       F L                  L D  K + I   K        
Sbjct: 116 APEHFSYQILNQA----FRL------------------LLDGAKPVLIAIGK-------G 146

Query: 193 PDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDS 252
             Y   +  AL V P   A ++     +   +GKP K  +  A+   G +  +++ +GD 
Sbjct: 147 RYYKRKDGLALDVGPFVTALEY-ATDTKATVVGKPSKTFFLEALRATGCEPEEAVMIGDD 205

Query: 253 LHHDIKGANAAGIQSVFIIGG 273
              D+ GA   G++ + +  G
Sbjct: 206 CRDDVGGAQDCGMRGIQVRTG 226

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published [Unknown function, Enzymes of unknown specificity]. Length = 257

>gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253

 Score = 45.9 bits (109), Expect = 7e-06
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 218 GGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFI 270
             E     KP   I+ +A+  +GV   +++ VGD L  DIKGA   G+++V+I
Sbjct: 143 SEEEGV-EKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWI 194

This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221

>gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 28/136 (20%), Positives = 51/136 (37%), Gaps = 28/136 (20%)

Query: 146 EEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVA-NPDYVTVEARALR 204
            + D IL    E       +  P    D+ ++L    +K + +V+  N            
Sbjct: 58  IDPDEILEALLEYNLESRLEPFP----DVVELLRRLKAKGVKLVILSN------------ 101

Query: 205 VMPGTLASKFEKLGGEVRW----------MGKPDKIIYKSAMAMVGVDACDSIAVGDSLH 254
                +    EKLG    +            KPD   Y+  +  +G+   + + + DS  
Sbjct: 102 GSREAVERLLEKLGLLDLFDAVFTSDDVGARKPDPEAYERVLERLGLPPEEILFIDDSP- 160

Query: 255 HDIKGANAAGIQSVFI 270
            D++ A AAGI++V +
Sbjct: 161 EDLEAARAAGIKTVHV 176

Length = 176

>gnl|CDD|200170 TIGR02252, DREG-2, REG-2-like, HAD superfamily (subfamily IA) hydrolase

 Score = 43.4 bits (103), Expect = 5e-05
 Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 10/102 (9%)

Query: 171 LQDLEKILEICASK-KIPMVVANPDYVTVEARALRVMPGT-LASKFEK--LGGEVRWMGK 226
             D  K+L+    +  I  V++N D      R   ++    L   F+      EV    K
Sbjct: 107 YPDAIKLLKDLRERGLILGVISNFDS-----RLRGLLEALGLLEYFDFVVTSYEVGAE-K 160

Query: 227 PDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSV 268
           PD  I++ A+   G+   +++ +GDSL +D +GA AAG +++
Sbjct: 161 PDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRAL 202

This family of proteins includes uncharacterized sequences from eukaryotes, cyanobacteria and Leptospira as well as the DREG-2 protein from Drosophila melanogaster which has been identified as a rhythmically (diurnally) regulated gene. This family is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called 'capping domain', or the absence of such a domain. This family is a member of subfamily 1A in which the cap domain consists of a predicted alpha helical bundle found in between the first and second catalytic motifs. A distinctive feature of this family is a conserved tandem pair of tryptophan residues in the cap domain. The most divergent sequences included within the scope of this model are from plants and have "FW" at this position instead. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. Length = 203

>gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases

 Score = 42.0 bits (99), Expect = 6e-05
 Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 12/84 (14%)

Query: 32  AWLLDQFGVLHDGK---------KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKL 82
           A L D  G L D +         + YPG    L+ L   G K+ + +N SRR    ++ L
Sbjct: 1   AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKGIKLALATNKSRRE--VLELL 58

Query: 83  KSLGFDPSLFAGAITSGELTHQYL 106
           + LG D   F   ITS      Y 
Sbjct: 59  EELGLD-DYFDPVITSNGAAIYYP 81

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139

>gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253

 Score = 42.8 bits (101), Expect = 9e-05
 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 10/97 (10%)

Query: 9   SNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGK----KPYPGAISTLEMLATTGAK 64
           SN P  F  L  +R + E    K  +       H  K    + YPG   TL  L  +G +
Sbjct: 56  SNYPTHFDYL--IRRLWEEYNPK-LVAAFVYAYHKLKFAYLRVYPGVRDTLMELRESGYR 112

Query: 65  MVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL 101
           + +I++         +KL+ LG     F   ITS E 
Sbjct: 113 LGIITDGLPVKQ--WEKLERLGVRD-FFDAVITSEEE 146

This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221

>gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase

 Score = 42.3 bits (99), Expect = 9e-05
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 2/92 (2%)

Query: 173 DLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIY 232
              + L+      I + +   D         R + G   +        +  +GKPD  I+
Sbjct: 98  GAREALKELKEAGIKLAILTGDNRLTANAIAR-LLGLFDALVSADLYGLVGVGKPDPKIF 156

Query: 233 KSAMAMVGVDACDSIAVGDSLHHDIKGANAAG 264
           + A+  +GV   + + VGD + +DI  A AAG
Sbjct: 157 ELALEELGVKPEEVLMVGDGV-NDIPAAKAAG 187

This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187

>gnl|CDD|181865 PRK09449, PRK09449, dUMP phosphatase; Provisional

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)

Query: 224 MGKPDKIIYKSAMAMVGVDACDSI-AVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLD 282
           + KPD  I+  A+  +G      +  VGD+LH DI G   AGI + ++         G+ 
Sbjct: 148 VAKPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIA 207

Query: 283 SYGEVADLSSVQTLVSK 299
              +V+ LS ++ L+ K
Sbjct: 208 PTYQVSSLSELEQLLCK 224

Length = 224

>gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only]

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIH 275
           KPD       +  +G+D  +++ VGDSL +DI  A AAG+ +V +  G +
Sbjct: 145 KPDPEPLLLLLEKLGLDPEEALMVGDSL-NDILAAKAAGVPAVGVTWGYN 193

Length = 220

>gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

 Score = 39.7 bits (93), Expect = 7e-04
 Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 11/100 (11%)

Query: 173 DLEKILEICASKKIPMVVANPDYVTVEARA--LRVMPGTLASKFEKL--GGEVRWMGKPD 228
            +  +LE   ++   + +     +T   RA    V+   L + F+ +    +V  +GKPD
Sbjct: 83  GVRALLEALRARGKKLAL-----LTNSPRADAKLVLELGLRALFDVVIDSSDVG-LGKPD 136

Query: 229 KIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSV 268
             IY  A+  +G+   + + V DS    I  A AAG+ +V
Sbjct: 137 PDIYLQALKKLGLKPSECLFVDDSPAG-IDAAKAAGMHTV 175

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177

>gnl|CDD|182466 PRK10444, PRK10444, UMP phosphatase; Provisional

 Score = 39.8 bits (93), Expect = 9e-04
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 189 VVANPDYVTVEARALRVMPGTLASKFEKLGGEVR-WMGKPDKIIYKSAMAMVGVDACDSI 247
           +  NPD      R      G L +  EK+ G    ++GKP   I ++A+  +   + +++
Sbjct: 139 IATNPD---THGRGFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETV 195

Query: 248 AVGDSLHHDIKGANAAGIQSVFIIGGI 274
            VGD+L  DI     AG++++ ++ G+
Sbjct: 196 IVGDNLRTDILAGFQAGLETILVLSGV 222

Length = 248

>gnl|CDD|162788 TIGR02254, YjjG/YfnB, HAD superfamily (subfamily IA) hydrolase, TIGR02254

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 226 KPDKIIYKSAMA-MVGVDACDSIAVGDSLHHDIKGANAAGIQSVF 269
           KPDK I+  A+  M      + + +GDSL  DIKG   AG+ + +
Sbjct: 152 KPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCW 196

This family consists of uncharacterized proteobacterial and gram positive bacterial sequences including YjjG from E. coli and YfnB from B. subtilis. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. Length = 224

>gnl|CDD|178251 PLN02645, PLN02645, phosphoglycolate phosphatase

 Score = 38.5 bits (90), Expect = 0.003
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 8/72 (11%)

Query: 32  AWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRA-STTIDKLKSLGFD-- 88
            ++ D  GV+  G K   G   TL+ML + G K+V ++N+S ++ +    K +SLG +  
Sbjct: 30  TFIFDCDGVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVT 89

Query: 89  -----PSLFAGA 95
                 S FA A
Sbjct: 90  EEEIFSSSFAAA 101

Length = 311

>gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]

 Score = 38.2 bits (89), Expect = 0.003
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 31  KAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS 90
           +  L +   +  +G KP PG +  LE L   G  + V S+S RRA+  +  L  LG    
Sbjct: 71  ERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERV--LARLGLLD- 127

Query: 91  LFAGAITSGELTH 103
            F   +T+ ++  
Sbjct: 128 YFDVIVTADDVAR 140

Length = 221

>gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]

 Score = 37.8 bits (88), Expect = 0.004
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 12/137 (8%)

Query: 171 LQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGT-LASKFEKL--GGEVRWMGKP 227
           +  + ++LE   ++ IP+ VA+    +    A RV+    L   F+ +    +V   GKP
Sbjct: 88  IPGVVELLEQLKARGIPLAVASS---SPRRAAERVLARLGLLDYFDVIVTADDVA-RGKP 143

Query: 228 DKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELG-LDSYGE 286
              IY  A   +GVD  + + V DS    I+ A AAG++ V +  G     L  LD++G 
Sbjct: 144 APDIYLLAAERLGVDPEECVVVEDSP-AGIQAAKAAGMRVVGVPAGHDRPHLDPLDAHGA 202

Query: 287 V---ADLSSVQTLVSKY 300
                DL+ +  L+   
Sbjct: 203 DTVLLDLAELPALLEAR 219

Length = 221

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	313
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	100.0
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	100.0
PRK10444	248	UMP phosphatase; Provisional	100.0
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	100.0
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	100.0
PLN02645	311	phosphoglycolate phosphatase	100.0
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	100.0
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	100.0
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	100.0
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	100.0
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	100.0
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.82
COG0546	220	Gph Predicted phosphatases [General function predi	99.81
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.81
PRK13288	214	pyrophosphatase PpaX; Provisional	99.8
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.8
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.8
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.79
PRK11587	218	putative phosphatase; Provisional	99.79
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.79
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.79
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.78
KOG1618	389	consensus Predicted phosphatase [General function	99.77
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.77
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.77
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	99.76
PRK06769	173	hypothetical protein; Validated	99.76
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.76
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.75
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.75
PLN02575	381	haloacid dehalogenase-like hydrolase	99.74
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.74
PLN02940	382	riboflavin kinase	99.74
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.73
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.73
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.73
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.72
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.72
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	99.72
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.71
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.71
PRK09449	224	dUMP phosphatase; Provisional	99.7
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.7
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.7
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.7
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.7
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.69
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.69
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.68
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.68
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	99.68
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	99.66
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.66
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	99.65
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.65
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.65
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.63
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	99.63
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	99.61
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.61
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.6
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.58
PRK01158	230	phosphoglycolate phosphatase; Provisional	99.57
PRK10513	270	sugar phosphate phosphatase; Provisional	99.57
PLN02811	220	hydrolase	99.56
PHA02597	197	30.2 hypothetical protein; Provisional	99.56
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	99.56
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	99.55
COG0241	181	HisB Histidinol phosphatase and related phosphatas	99.54
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.53
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	99.53
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.52
PRK10976	266	putative hydrolase; Provisional	99.51
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.49
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.48
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.48
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	99.47
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.47
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	99.46
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.46
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	99.45
PHA02530	300	pseT polynucleotide kinase; Provisional	99.44
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	99.43
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	99.43
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	99.42
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	99.4
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	99.4
PLN02887	580	hydrolase family protein	99.4
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	99.38
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.37
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.37
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	99.37
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.37
PLN02954	224	phosphoserine phosphatase	99.36
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	99.36
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.35
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	99.35
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	99.32
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	99.32
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	99.28
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.25
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.22
PTZ00174	247	phosphomannomutase; Provisional	99.2
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	99.19
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	99.18
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	99.15
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	99.15
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	99.14
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.12
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.1
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	99.05
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	99.03
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	99.03
PTZ00445	219	p36-lilke protein; Provisional	99.02
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.0
PLN02382	413	probable sucrose-phosphatase	98.91
PRK13582	205	thrH phosphoserine phosphatase; Provisional	98.89
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	98.82
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	98.81
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	98.81
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	98.77
PLN02423	245	phosphomannomutase	98.75
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	98.73
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	98.71
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	98.68
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	98.59
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	98.53
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	98.42
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	98.42
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	98.39
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	98.35
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	98.32
COG4229	229	Predicted enolase-phosphatase [Energy production a	98.27
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	98.24
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	98.2
PHA03398	303	viral phosphatase superfamily protein; Provisional	98.15
PRK08238	479	hypothetical protein; Validated	98.11
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	98.1
PLN02580	384	trehalose-phosphatase	98.06
PLN03017	366	trehalose-phosphatase	98.04
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	97.97
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	97.89
KOG2961	190	consensus Predicted hydrolase (HAD superfamily) [G	97.86
PLN02151	354	trehalose-phosphatase	97.78
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	97.76
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	97.72
PRK11590	211	hypothetical protein; Provisional	97.69
PF06437	408	ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0	97.59
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	97.44
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	97.4
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	97.37
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	97.34
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	97.21
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	97.13
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	97.08
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	97.07
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	97.02
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	96.97
COG4087	152	Soluble P-type ATPase [General function prediction	96.93
PRK10671	834	copA copper exporting ATPase; Provisional	96.75
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	96.72
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	96.65
COG4359	220	Uncharacterized conserved protein [Function unknow	96.56
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	96.4
PF02358	235	Trehalose_PPase: Trehalose-phosphatase; InterPro:	96.32
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	96.24
COG3700	237	AphA Acid phosphatase (class B) [General function	95.99
COG2503	274	Predicted secreted acid phosphatase [General funct	95.98
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	95.96
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	95.83
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	95.38
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	95.33
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	95.24
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	95.11
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	94.94
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	94.89
COG4030	315	Uncharacterized protein conserved in archaea [Func	94.87
COG4996	164	Predicted phosphatase [General function prediction	94.77
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	94.45
TIGR01658	274	EYA-cons_domain eyes absent protein conserved doma	93.69
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	93.5
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	93.47
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	92.85
COG5610	635	Predicted hydrolase (HAD superfamily) [General fun	92.34
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	92.31
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	92.29
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	91.8
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	91.77
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	91.36
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	90.62
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	90.57
COG4850	373	Uncharacterized conserved protein [Function unknow	90.32
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	90.32
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	90.23
KOG3189	252	consensus Phosphomannomutase [Lipid transport and	90.2
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	90.16
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	90.02
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	89.92
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	89.84
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	89.8
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	89.47
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	89.44
PRK14988	224	GMP/IMP nucleotidase; Provisional	89.39
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	89.09
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	89.08
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	88.96
PF04312	138	DUF460: Protein of unknown function (DUF460); Inte	88.77
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	88.46
KOG2961	190	consensus Predicted hydrolase (HAD superfamily) [G	88.26
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	88.16
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	88.13
KOG2116	738	consensus Protein involved in plasmid maintenance/	88.1
PRK15122	903	magnesium-transporting ATPase; Provisional	88.04
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	87.99
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	87.66
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	87.66
PRK13288	214	pyrophosphatase PpaX; Provisional	87.5
KOG2134	422	consensus Polynucleotide kinase 3' phosphatase [Re	87.23
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	86.95
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	86.76
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	86.5
PLN02645	311	phosphoglycolate phosphatase	86.35
KOG2630	254	consensus Enolase-phosphatase E-1 [Amino acid tran	86.34
PRK01122	679	potassium-transporting ATPase subunit B; Provision	85.63
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	85.48
PRK14010	673	potassium-transporting ATPase subunit B; Provision	85.28
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	84.84
PRK11587	218	putative phosphatase; Provisional	84.58
KOG2470	510	consensus Similar to IMP-GMP specific 5'-nucleotid	84.52
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	84.49
COG0546	220	Gph Predicted phosphatases [General function predi	84.34
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	84.08
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	83.16
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	82.75
PRK13226	229	phosphoglycolate phosphatase; Provisional	81.95
COG5083	580	SMP2 Uncharacterized protein involved in plasmid m	81.9
PRK10671	834	copA copper exporting ATPase; Provisional	81.44
PRK09449	224	dUMP phosphatase; Provisional	81.28
PLN02575	381	haloacid dehalogenase-like hydrolase	80.75
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	80.62
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	80.58
PRK14010	673	potassium-transporting ATPase subunit B; Provision	80.23
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	80.08
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	80.05

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.9e-44  Score=318.05  Aligned_cols=253  Identities=29%  Similarity=0.519  Sum_probs=220.4

Q ss_pred             HHhhhhcCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCc-hHHHHHHHh-CCCCCcccccccchH
Q 021350           22 RHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRA-STTIDKLKS-LGFDPSLFAGAITSG   99 (313)
Q Consensus        22 ~~~~~~~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~-~~~~~~l~~-~G~~~~~~~~ii~~~   99 (313)
                      .++++  +|++++||+||||+++.+++|++.++|++|+++|++++++||+++.. +.+.++|++ +|++... +.|++|+
T Consensus         2 ~~~~~--~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~-~~i~TS~   78 (269)
T COG0647           2 FDVMD--KYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTP-DDIVTSG   78 (269)
T ss_pred             cchhh--hcCEEEEcCcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCH-HHeecHH
Confidence            34566  99999999999999999999999999999999999999999988665 559999999 5555655 9999999


Q ss_pred             HHHHHHHHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCC--CCEEEecCCCCCCCCCCCCCCCCHHHHHHH
Q 021350          100 ELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEE--ADFILAHGTEGMGLPSGDVRPMSLQDLEKI  177 (313)
Q Consensus       100 ~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (313)
                      .++++|+.++.+      +++||+++.. .....+...|+.+..+.+.  ++++++          |.|...+|+.+.++
T Consensus        79 ~at~~~l~~~~~------~~kv~viG~~-~l~~~l~~~G~~~~~~~~~~~~d~Vv~----------g~d~~~~~e~l~~a  141 (269)
T COG0647          79 DATADYLAKQKP------GKKVYVIGEE-GLKEELEGAGFELVDEEEPARVDAVVV----------GLDRTLTYEKLAEA  141 (269)
T ss_pred             HHHHHHHHhhCC------CCEEEEECCc-chHHHHHhCCcEEeccCCCCcccEEEE----------ecCCCCCHHHHHHH
Confidence            999999999874      5788887643 3356899999988774444  366666          67899999999999


Q ss_pred             HHHHHhCCCcEEEEcCCccccccchhccCCchHHHHHHHh-cCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhh
Q 021350          178 LEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHD  256 (313)
Q Consensus       178 l~~l~~~g~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~D  256 (313)
                      +..+ ++|.+||+||+|..++.+.++.++.|.++.+++.+ +..+..+|||++.+|+.+++.++.++++|+||||++.+|
T Consensus       142 ~~~i-~~g~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~~~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TD  220 (269)
T COG0647         142 LLAI-AAGAPFIATNPDLTVPTERGLRPGAGAIAALLEQATGREPTVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTD  220 (269)
T ss_pred             HHHH-HcCCcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCcccccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhh
Confidence            9765 56699999999999999999999999999999986 666779999999999999999999999999999999999


Q ss_pred             HHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350          257 IKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS  312 (313)
Q Consensus       257 i~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  312 (313)
                      |.+|+++|+++++|+||.++.+++                 .....+|+|+.+||+
T Consensus       221 I~~a~~~G~~t~LV~TGv~~~~~~-----------------~~~~~~p~~v~~sl~  259 (269)
T COG0647         221 ILGAKAAGLDTLLVLTGVSSAEDL-----------------DRAEVKPTYVVDSLA  259 (269)
T ss_pred             HHHHHHcCCCEEEEccCCCChhhh-----------------hhhccCCcchHhhHH
Confidence            999999999999999999988873                 333679999999987

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=3.6e-42  Score=300.32  Aligned_cols=263  Identities=20%  Similarity=0.324  Sum_probs=223.5

Q ss_pred             cchHHhhhhcCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCC-CCchHHHHHHHhCCCCCcccccccc
Q 021350           19 NGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAGAIT   97 (313)
Q Consensus        19 ~~~~~~~~~~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~-~~~~~~~~~l~~~G~~~~~~~~ii~   97 (313)
                      +...+|++  +|++++||+||+||.+..++|++.++++.|++.|+.+.++||++ ++.+++.++++++|+..-..++|++
T Consensus        13 ~~~~e~l~--~~DtfifDcDGVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~v~e~~i~s   90 (306)
T KOG2882|consen   13 EEARELLD--SFDTFIFDCDGVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNSVKEENIFS   90 (306)
T ss_pred             HHHHHHHh--hcCEEEEcCCcceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccccCcccccC
Confidence            66888999  99999999999999999999999999999999999999999977 4567999999999999334499999


Q ss_pred             hHHHHHHHHHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCC-------------------CCCCEEEecCCCC
Q 021350           98 SGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV-------------------EEADFILAHGTEG  158 (313)
Q Consensus        98 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~-------------------~~~~~~~~~~~~~  158 (313)
                      |+.+++.||+++...     ++++|+++.. .....+++.|++.....                   .++.+|++     
T Consensus        91 sa~~~a~ylk~~~~~-----~k~Vyvig~~-gi~~eL~~aG~~~~g~~~~~~~~~~~~~~~~~~~~d~~VgAVvv-----  159 (306)
T KOG2882|consen   91 SAYAIADYLKKRKPF-----GKKVYVIGEE-GIREELDEAGFEYFGGGPDGKDTDGAKSFVLSIGLDPDVGAVVV-----  159 (306)
T ss_pred             hHHHHHHHHHHhCcC-----CCeEEEecch-hhhHHHHHcCceeecCCCCcccccccccchhhcCCCCCCCEEEE-----
Confidence            999999999887611     6777776532 23457888887653210                   11234444     


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEcCCcccc-ccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHH
Q 021350          159 MGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTV-EARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAM  236 (313)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~i~tn~d~~~~-~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~  236 (313)
                           |+|.+++|.++.+++.+|+..+..|++||.|..++ ......++.|.+++.++. +++++.++|||++.+++.+.
T Consensus       160 -----g~D~hfsy~KL~kA~~yLqnP~clflatn~D~~~p~~~~~~ipG~G~~v~av~~~t~R~P~v~GKP~~~m~~~l~  234 (306)
T KOG2882|consen  160 -----GYDEHFSYPKLMKALNYLQNPGCLFLATNRDATTPPTPGVEIPGAGSFVAAVKFATGRQPIVLGKPSTFMFEYLL  234 (306)
T ss_pred             -----ecccccCHHHHHHHHHHhCCCCcEEEeccCccccCCCCCeeccCCccHHHHHHHHhcCCCeecCCCCHHHHHHHH
Confidence                 78999999999999999998899999999999777 566678899999988886 69999999999999999999


Q ss_pred             HHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350          237 AMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS  312 (313)
Q Consensus       237 ~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  312 (313)
                      ++++++|++|+||||++.+||..|+++|++|++|+||.++.++.             +.+..+..+.|||++++|+
T Consensus       235 ~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~-------------~~~~~~~~~~PDyy~~~l~  297 (306)
T KOG2882|consen  235 EKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDI-------------LEAQGDNKMVPDYYADSLG  297 (306)
T ss_pred             HHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHH-------------HhcccccCCCCchHHhhHH
Confidence            99999999999999999999999999999999999999988873             2333466789999998874

>PRK10444 UMP phosphatase; Provisional

Probab=100.00  E-value=2e-39  Score=286.91  Aligned_cols=241  Identities=22%  Similarity=0.372  Sum_probs=207.6

Q ss_pred             ccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCC-CchHHHHHHHhCCCCCcccccccchHHHHHHHHHh
Q 021350           30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSR-RASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLR  108 (313)
Q Consensus        30 ~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~-~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l~~  108 (313)
                      +++|+||+|||||++.+++|++.+++++|+++|++++++||++. +..++.++|+.+|++... +++++|+.++++||++
T Consensus         1 ~~~v~~DlDGtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~-~~i~ts~~~~~~~L~~   79 (248)
T PRK10444          1 IKNVICDIDGVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPD-SVFYTSAMATADFLRR   79 (248)
T ss_pred             CcEEEEeCCCceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCH-hhEecHHHHHHHHHHh
Confidence            57999999999999999999999999999999999999999775 467999999999999887 9999999999999998


Q ss_pred             cCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCcE
Q 021350          109 RDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPM  188 (313)
Q Consensus       109 ~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~  188 (313)
                      +.       +.++|+++.. .....+.+.|+++..  ++++++++          +.+.+++|+.+..++..+ ++|.++
T Consensus        80 ~~-------~~~v~~~g~~-~l~~~l~~~g~~~~~--~~~~~Vvv----------g~~~~~~~~~l~~a~~~l-~~g~~~  138 (248)
T PRK10444         80 QE-------GKKAYVIGEG-ALIHELYKAGFTITD--INPDFVIV----------GETRSYNWDMMHKAAYFV-ANGARF  138 (248)
T ss_pred             CC-------CCEEEEEcCH-HHHHHHHHCcCEecC--CCCCEEEE----------eCCCCCCHHHHHHHHHHH-HCCCEE
Confidence            75       5677776542 334577788887654  56788877          446789999999998776 579999


Q ss_pred             EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcE
Q 021350          189 VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQS  267 (313)
Q Consensus       189 i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~  267 (313)
                      +++|+|...+   .+.++.|.+.+.++. .+.++...|||+|.+|+.+++++++++++|+||||++.+||.+|+++|+++
T Consensus       139 i~~n~D~~~~---g~~~~~G~~~~~l~~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~  215 (248)
T PRK10444        139 IATNPDTHGR---GFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLET  215 (248)
T ss_pred             EEECCCCCCC---CCcCcHHHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCE
Confidence            9999999544   457888999998887 477788899999999999999999999999999999889999999999999


Q ss_pred             EEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350          268 VFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS  312 (313)
Q Consensus       268 i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  312 (313)
                      ++|+||.++.++                 +.+....|+|+++||.
T Consensus       216 vlV~~G~~~~~~-----------------l~~~~~~pd~~~~sl~  243 (248)
T PRK10444        216 ILVLSGVSTLDD-----------------IDSMPFRPSWIYPSVA  243 (248)
T ss_pred             EEECCCCCCHHH-----------------HhcCCCCCCEEECCHH
Confidence            999999998766                 3334578999999874

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=100.00  E-value=1.6e-38  Score=282.06  Aligned_cols=245  Identities=22%  Similarity=0.334  Sum_probs=210.8

Q ss_pred             ccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCC-CCchHHHHHHHhCCCCCcccccccchHHHHHHHHHh
Q 021350           30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLR  108 (313)
Q Consensus        30 ~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~-~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l~~  108 (313)
                      ||+++||+|||||++.+.+|++.++|++|+++|++++++||++ |+.+.+.++++++|++... ++|++++.++++||++
T Consensus         1 ~~~~~~D~DGtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~-~~iit~~~~~~~~l~~   79 (249)
T TIGR01457         1 YKGYLIDLDGTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATL-ETVFTASMATADYMND   79 (249)
T ss_pred             CCEEEEeCCCceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCh-hhEeeHHHHHHHHHHh
Confidence            6899999999999999999999999999999999999999855 7788999999999999877 9999999999999998


Q ss_pred             cCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCcE
Q 021350          109 RDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPM  188 (313)
Q Consensus       109 ~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~  188 (313)
                      +..      ++++++++.. .....+.+.|+.+..  ++++.+++          +++..++|+.+..++..+ ++|.++
T Consensus        80 ~~~------~~~v~~lg~~-~l~~~l~~~g~~~~~--~~~~~Vvv----------g~~~~~~y~~l~~a~~~l-~~g~~~  139 (249)
T TIGR01457        80 LKL------EKTVYVIGEE-GLKEAIKEAGYVEDK--EKPDYVVV----------GLDRQIDYEKFATATLAI-RKGAHF  139 (249)
T ss_pred             cCC------CCEEEEEcCh-hHHHHHHHcCCEecC--CCCCEEEE----------eCCCCCCHHHHHHHHHHH-HCCCeE
Confidence            752      4666766543 335578888886654  56788877          345789999999999877 568899


Q ss_pred             EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcE
Q 021350          189 VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQS  267 (313)
Q Consensus       189 i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~  267 (313)
                      ++||+|..++......++.|.+..+++. ++.++...|||+|.+|+.+++++++++++++||||++.+||.+|+++|+++
T Consensus       140 i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~  219 (249)
T TIGR01457       140 IGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDT  219 (249)
T ss_pred             EEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcE
Confidence            9999999999777677889999999987 478888999999999999999999999999999999779999999999999


Q ss_pred             EEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350          268 VFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS  312 (313)
Q Consensus       268 i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  312 (313)
                      ++|.+|.++.++                 +......|+|++++|.
T Consensus       220 v~v~~G~~~~~~-----------------~~~~~~~pd~~v~~l~  247 (249)
T TIGR01457       220 LLVHTGVTKAEE-----------------VAGLPIAPTHVVSSLA  247 (249)
T ss_pred             EEEcCCCCCHHH-----------------HhcCCCCCCEEeCChh
Confidence            999999987654                 2223468999999875

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=100.00  E-value=1.4e-37  Score=280.75  Aligned_cols=253  Identities=21%  Similarity=0.315  Sum_probs=207.7

Q ss_pred             CccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCC-CCchHHHHHHHhCCCCCcccccccchHHHHHHHHH
Q 021350           29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLL  107 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~-~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l~  107 (313)
                      +|++|+||+|||||++.+.+|++.++|++|+++|+++.++||++ ++..++..+++++|++... +++++++.++++||+
T Consensus         1 ~~~~~~~D~DGtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~-~~i~ts~~~~~~~l~   79 (279)
T TIGR01452         1 RAQGFIFDCDGVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLA-EQLFSSALCAARLLR   79 (279)
T ss_pred             CccEEEEeCCCceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCh-hhEecHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999976 4567888999999999887 999999999999998


Q ss_pred             hc-CchhhhhcCCeEEEeecCcccchhhccCCccccCCC------------------CCCCEEEecCCCCCCCCCCCCCC
Q 021350          108 RR-DDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV------------------EEADFILAHGTEGMGLPSGDVRP  168 (313)
Q Consensus       108 ~~-~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~  168 (313)
                      +. ..      +.++|+++.. .....+++.|+.+....                  ++++++++          +.+..
T Consensus        80 ~~~~~------~~~v~~iG~~-~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vvv----------~~d~~  142 (279)
T TIGR01452        80 QPPDA------PKAVYVIGEE-GLRAELDAAGIRLAGDPSAGDGAAPRGSGAFMKLEENVGAVVV----------GYDEH  142 (279)
T ss_pred             hhCcC------CCEEEEEcCH-HHHHHHHHCCCEEecCcccccccchhhcccccccCCCCCEEEE----------ecCCC
Confidence            84 21      4677776543 33457888888764321                  24566666          45688


Q ss_pred             CCHHHHHHHHHHHHhCCCcEEEEcCCccccccch-hccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcE
Q 021350          169 MSLQDLEKILEICASKKIPMVVANPDYVTVEARA-LRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDS  246 (313)
Q Consensus       169 ~~~~~~~~~l~~l~~~g~~~i~tn~d~~~~~~~~-~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~  246 (313)
                      ++|+++.++++.++++|..+++||++...+.... ..++.+.+...++. .+.++...|||+|..|+.+++++|++|++|
T Consensus       143 ~~y~~i~~~l~~L~~~g~~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~  222 (279)
T TIGR01452       143 FSYAKLREACAHLREPGCLFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPART  222 (279)
T ss_pred             CCHHHHHHHHHHHhcCCCEEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhE
Confidence            9999999999999888887799999987764433 24566677666665 577888899999999999999999999999


Q ss_pred             EEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHH--hhcCCCCcEEecCCc
Q 021350          247 IAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLV--SKYDAYPSYVLPSFS  312 (313)
Q Consensus       247 v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~l~  312 (313)
                      +||||++.+||.+|+++|+++++|+||.++.+++.             ++.  .+....|+|++++|+
T Consensus       223 lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~-------------~~~~~~~~~~~Pd~~~~~l~  277 (279)
T TIGR01452       223 LMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQ-------------EYLAAGQHDLVPDYVVESLA  277 (279)
T ss_pred             EEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHH-------------hhhcccccCCCCCEEecccc
Confidence            99999977999999999999999999999776531             111  134578999999986

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PLN02645 phosphoglycolate phosphatase

Probab=100.00  E-value=2.4e-36  Score=276.47  Aligned_cols=263  Identities=19%  Similarity=0.267  Sum_probs=209.9

Q ss_pred             ccccchHHhhhhcCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCC-CCchHHHHHHHhCCCCCccccc
Q 021350           16 QTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAG   94 (313)
Q Consensus        16 ~~~~~~~~~~~~~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~-~~~~~~~~~l~~~G~~~~~~~~   94 (313)
                      +...++.++++  +||+|+||+|||||++.+++|++.++|++|+++|++++++||++ ++.+++.++|+++|++... ++
T Consensus        16 ~~~~~~~~~~~--~~~~~~~D~DGtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~-~~   92 (311)
T PLN02645         16 LTLENADELID--SVETFIFDCDGVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTE-EE   92 (311)
T ss_pred             CCHHHHHHHHH--hCCEEEEeCcCCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCCh-hh
Confidence            45678999999  99999999999999999999999999999999999999999966 5567889999999999877 99


Q ss_pred             ccchHHHHHHHHHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCC------------------CCCCCEEEecCC
Q 021350           95 AITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVEN------------------VEEADFILAHGT  156 (313)
Q Consensus        95 ii~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~------------------~~~~~~~~~~~~  156 (313)
                      |++++..+..++++....    -++++|+++. ......+++.|+.....                  .++.+++++   
T Consensus        93 I~ts~~~~~~~l~~~~~~----~~~~V~viG~-~~~~~~l~~~Gi~~~~g~~~~~~~~~~~~~~~~~~~~~i~aVvv---  164 (311)
T PLN02645         93 IFSSSFAAAAYLKSINFP----KDKKVYVIGE-EGILEELELAGFQYLGGPEDGDKKIELKPGFLMEHDKDVGAVVV---  164 (311)
T ss_pred             EeehHHHHHHHHHhhccC----CCCEEEEEcC-HHHHHHHHHCCCEEecCccccccccccccccccccCCCCCEEEE---
Confidence            999999999999875310    0345666553 23345677788765321                  122245555   


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHh-CCCcEEEEcCCccccccch-hccCCchHHHHHHH-hcCceeecCCCCHHHHH
Q 021350          157 EGMGLPSGDVRPMSLQDLEKILEICAS-KKIPMVVANPDYVTVEARA-LRVMPGTLASKFEK-LGGEVRWMGKPDKIIYK  233 (313)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~~i~tn~d~~~~~~~~-~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~  233 (313)
                             |.+..++|+.+..++..++. +|..+++||+|..++.... ..++.|.+...+.. .+.++..+|||+|.+|+
T Consensus       165 -------g~d~~~~~~~l~~a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~  237 (311)
T PLN02645        165 -------GFDRYINYYKIQYATLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTFMMD  237 (311)
T ss_pred             -------ecCCCCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCcccCCCChHHHHH
Confidence                   56788999999999988764 6888999999987654333 45677777776665 56777889999999999


Q ss_pred             HHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCC
Q 021350          234 SAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSF  311 (313)
Q Consensus       234 ~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l  311 (313)
                      .+++++++++++++||||++.+||.+|+++|+++++|+||.+..+++..               .+....|+|+++++
T Consensus       238 ~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~---------------~~~~~~pd~~~~~~  300 (311)
T PLN02645        238 YLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLS---------------PENKIQPDFYTSKI  300 (311)
T ss_pred             HHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHh---------------ccCCCCCCEEECCH
Confidence            9999999999999999999889999999999999999999987654210               01246788888776

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=100.00  E-value=6.6e-35  Score=259.98  Aligned_cols=239  Identities=19%  Similarity=0.316  Sum_probs=193.9

Q ss_pred             ccEEEEeccceeecCCc----cCccHHHHHHHHHHCCCcEEEEeCCCCC-chHHHHHHHhCCCCCcccccccchHHHHHH
Q 021350           30 FKAWLLDQFGVLHDGKK----PYPGAISTLEMLATTGAKMVVISNSSRR-ASTTIDKLKSLGFDPSLFAGAITSGELTHQ  104 (313)
Q Consensus        30 ~k~iifDlDGTL~~~~~----~~~~a~~~l~~l~~~g~~~~~~Tn~~~~-~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~  104 (313)
                      +++|+||+|||||++.+    ++|++.+++++|+++|++++++||++.. .+++.++++++|++... ++|++|+.++++
T Consensus         1 ~k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~-~~i~ts~~~~~~   79 (257)
T TIGR01458         1 VKGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISE-DEVFTPAPAARQ   79 (257)
T ss_pred             CCEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCH-HHeEcHHHHHHH
Confidence            47999999999999888    9999999999999999999999997644 57899999999999877 999999999999


Q ss_pred             HHHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCC-CCCCHHHHHHHHHHHHh
Q 021350          105 YLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDV-RPMSLQDLEKILEICAS  183 (313)
Q Consensus       105 ~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~  183 (313)
                      ||++..        .++|+++... ....+.  |+.    .++++++++          |.+ ..++|+++.+++..+++
T Consensus        80 ~l~~~~--------~~~~~~g~~~-~~~~~~--~~~----~~~~~~Vv~----------g~~~~~~~y~~l~~a~~~L~~  134 (257)
T TIGR01458        80 LLEEKQ--------LRPMLLVDDR-VLPDFD--GID----TSDPNCVVM----------GLAPEHFSYQILNQAFRLLLD  134 (257)
T ss_pred             HHHhcC--------CCeEEEECcc-HHHHhc--cCC----CCCCCEEEE----------ecccCccCHHHHHHHHHHHHc
Confidence            998864        4566655432 222343  321    245676666          332 46889999999999988


Q ss_pred             CCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHH
Q 021350          184 KKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGAN  261 (313)
Q Consensus       184 ~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~  261 (313)
                      .+.++ ++||++..++......++.|.+...++. .+.++..+|||+|.+|+.++++++++|++|+||||++.+||.+|+
T Consensus       135 ~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~  214 (257)
T TIGR01458       135 GAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQ  214 (257)
T ss_pred             CCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHH
Confidence            88777 7889999888766667788888877776 477778899999999999999999999999999999779999999


Q ss_pred             HcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCC
Q 021350          262 AAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSF  311 (313)
Q Consensus       262 ~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l  311 (313)
                      ++|+.+++|.||.++.++.                 ......|+|+++++
T Consensus       215 ~~G~~~i~v~~G~~~~~~~-----------------~~~~~~pd~~~~sl  247 (257)
T TIGR01458       215 DCGMRGIQVRTGKYRPSDE-----------------EKINVPPDLTCDSL  247 (257)
T ss_pred             HcCCeEEEECCCCCChHHh-----------------cccCCCCCEEECCH
Confidence            9999999999998655431                 11235678887775

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=100.00  E-value=5.7e-33  Score=245.74  Aligned_cols=241  Identities=28%  Similarity=0.423  Sum_probs=192.6

Q ss_pred             hHHhhhhcCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHH
Q 021350           21 LRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (313)
Q Consensus        21 ~~~~~~~~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~  100 (313)
                      ++++++  +|++++||+||||+++.+++|++.++|++|+++|+++.++||++++..++.++++++|++.+.++.|+++..
T Consensus         1 ~~~~~~--~~~~~~~D~dG~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~   78 (242)
T TIGR01459         1 IFDLIN--DYDVFLLDLWGVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGE   78 (242)
T ss_pred             Chhhhh--cCCEEEEecccccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHH
Confidence            467888  999999999999999999999999999999999999999999887777778899999998723389999998


Q ss_pred             HHHHHHHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 021350          101 LTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEI  180 (313)
Q Consensus       101 ~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  180 (313)
                      ...+++..... ....-+.++++++........+...+.......++++++++.+.        .+..++|+++.++++.
T Consensus        79 ~~~~~l~~~~~-~~~~~~~~~~~vGd~~~d~~~~~~~~~~~~~~~~~~~~vvv~~~--------~~~~~~~~~~~~~l~~  149 (242)
T TIGR01459        79 IAVQMILESKK-RFDIRNGIIYLLGHLENDIINLMQCYTTDDENKANASLITIYRS--------ENEKLDLDEFDELFAP  149 (242)
T ss_pred             HHHHHHHhhhh-hccCCCceEEEeCCcccchhhhcCCCccccCCcccCcEEEEcCC--------CcccCCHHHHHHHHHH
Confidence            87777654210 00011356777766554455565555533332345666766432        1244789999999999


Q ss_pred             HHhCCCcEEEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCC-CCcEEEEcCCchhhHHH
Q 021350          181 CASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVD-ACDSIAVGDSLHHDIKG  259 (313)
Q Consensus       181 l~~~g~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~-~~~~v~IGDs~~~Di~~  259 (313)
                      ++++|+++++||++..++......++.|.+...++.++.++...|||+|..|+.++++++.. +++|+||||++.+||.+
T Consensus       150 l~~~g~~~i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~  229 (242)
T TIGR01459       150 IVARKIPNICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRMLMVGDSFYTDILG  229 (242)
T ss_pred             HHhCCCcEEEECCCEeccCCCceEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEEEECCCcHHHHHH
Confidence            88899999999999988876666778888888777777777789999999999999999874 68999999997799999


Q ss_pred             HHHcCCcEEEEcC
Q 021350          260 ANAAGIQSVFIIG  272 (313)
Q Consensus       260 a~~aG~~~i~V~~  272 (313)
                      |+++|+.+++|+|
T Consensus       230 a~~~G~~~i~v~t  242 (242)
T TIGR01459       230 ANRLGIDTALVLT  242 (242)
T ss_pred             HHHCCCeEEEEeC
Confidence            9999999999986

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=100.00  E-value=1.1e-32  Score=253.21  Aligned_cols=243  Identities=23%  Similarity=0.307  Sum_probs=187.8

Q ss_pred             EEEEeccceeecCCccCccHHHHHHHHHHC----CCcEEEEeCCC-CCchHHHHHH-HhCCCCCcccccccchHHHHHHH
Q 021350           32 AWLLDQFGVLHDGKKPYPGAISTLEMLATT----GAKMVVISNSS-RRASTTIDKL-KSLGFDPSLFAGAITSGELTHQY  105 (313)
Q Consensus        32 ~iifDlDGTL~~~~~~~~~a~~~l~~l~~~----g~~~~~~Tn~~-~~~~~~~~~l-~~~G~~~~~~~~ii~~~~~~~~~  105 (313)
                      +++||||||||++.+++|++.++++.|+..    |+++.++||++ ++.++..+.+ +++|++... ++++++..++..+
T Consensus         2 ~~ifD~DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~-~~i~~s~~~~~~l   80 (321)
T TIGR01456         2 GFAFDIDGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSP-LQVIQSHSPYKSL   80 (321)
T ss_pred             EEEEeCcCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCH-HHHHhhhHHHHHH
Confidence            689999999999999999999999999998    99999999965 5567778877 899999887 8999998877777


Q ss_pred             HHhcCchhhhhcCCeEEEeecCcccchhhccCCccccC----------C-----------------------CCCCCEEE
Q 021350          106 LLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVE----------N-----------------------VEEADFIL  152 (313)
Q Consensus       106 l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~----------~-----------------------~~~~~~~~  152 (313)
                      +.+..        .++++++.+. ....+++.|++...          +                       ..++++++
T Consensus        81 l~~~~--------~~v~viG~~~-~~~~l~~~G~~~vv~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aVv  151 (321)
T TIGR01456        81 VNKYE--------KRILAVGTGS-VRGVAEGYGFQNVVHQDEIVRYFRDIDPFSGMSDEQVREYSRDIPDLTTKRFDAVL  151 (321)
T ss_pred             HHHcC--------CceEEEeChH-HHHHHHHcCCcccccHHHHHhcCCCCCcccccCHHHhhcccccccccCCCceeEEE
Confidence            64432        3566655432 34567777776321          0                       12345565


Q ss_pred             ecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCC----------CcEEEEcCCccccccchh-ccCCchHHHHHHH----h
Q 021350          153 AHGTEGMGLPSGDVRPMSLQDLEKILEICASKK----------IPMVVANPDYVTVEARAL-RVMPGTLASKFEK----L  217 (313)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g----------~~~i~tn~d~~~~~~~~~-~~~~g~~~~~~~~----~  217 (313)
                      +.          .+....+.+++.++..+++.|          .++++||+|..++...++ +++.|.+..+++.    +
T Consensus       152 v~----------~d~~~~~~~l~~~~~~l~~~g~~g~~~~~~~~~~i~~n~D~~~p~~~g~~~~g~Ga~~~~l~~~~~~~  221 (321)
T TIGR01456       152 VF----------NDPVDWAADIQIISDALNSEGLPGEKSGKPSIPIYFSNQDLLWANEYKLNRFGQGAFRLLLERIYLEL  221 (321)
T ss_pred             Ee----------cCchHHhhhHHHHHHHHhCCCCcCCCCCCCCCCEEEeCCCEeeccCCCCceechHHHHHHHHHHHHHh
Confidence            52          234455667888887776532          688999999999977664 7889999888886    2


Q ss_pred             -cCce--eecCCCCHHHHHHHHHHh--------CC-----CCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccc
Q 021350          218 -GGEV--RWMGKPDKIIYKSAMAMV--------GV-----DACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGL  281 (313)
Q Consensus       218 -~~~~--~~~gKP~~~~~~~~~~~l--------gv-----~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~  281 (313)
                       +..+  ..+|||++.+|+.+++++        ++     ++++++||||++.+||.+|+++|+.+++|+||.++.++..
T Consensus       222 tg~~~~~~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~  301 (321)
T TIGR01456       222 NGKPLQYYTLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDL  301 (321)
T ss_pred             cCCCcceEEcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCC
Confidence             4432  678999999999999888        43     5589999999999999999999999999999988765421


Q ss_pred             cCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350          282 DSYGEVADLSSVQTLVSKYDAYPSYVLPSFS  312 (313)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  312 (313)
                                        ....|+|++++|+
T Consensus       302 ------------------~~~~p~~vv~~l~  314 (321)
T TIGR01456       302 ------------------KECKPTLIVNDVF  314 (321)
T ss_pred             ------------------CCCCCCEEECCHH
Confidence                              2357888888864

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=100.00  E-value=2.6e-32  Score=225.27  Aligned_cols=228  Identities=25%  Similarity=0.395  Sum_probs=192.2

Q ss_pred             hcCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCC-chHHHHHHHhCCCCCcccccccchHHHHHHH
Q 021350           27 TRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRR-ASTTIDKLKSLGFDPSLFAGAITSGELTHQY  105 (313)
Q Consensus        27 ~~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~-~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~  105 (313)
                      ++.++.+++|+-|||+.+...+|++.++++.|+.++.++.++||.+.. .+++.++|+++||++.. ++|++|..++.+|
T Consensus         4 ~~~v~gvLlDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~e-eei~tsl~aa~~~   82 (262)
T KOG3040|consen    4 GRAVKGVLLDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSE-EEIFTSLPAARQY   82 (262)
T ss_pred             ccccceEEEeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccH-HHhcCccHHHHHH
Confidence            457899999999999999999999999999999999999999997755 47999999999999998 9999999999999


Q ss_pred             HHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCC
Q 021350          106 LLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKK  185 (313)
Q Consensus       106 l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g  185 (313)
                      +.+..-      ..  |.+ ...+-...|.  |+  .  ..+|.+++..-.         ...++|+.+..+++.+.+..
T Consensus        83 ~~~~~l------rP--~l~-v~d~a~~dF~--gi--d--Ts~pn~VVigla---------pe~F~y~~ln~AFrvL~e~~  138 (262)
T KOG3040|consen   83 LEENQL------RP--YLI-VDDDALEDFD--GI--D--TSDPNCVVIGLA---------PEGFSYQRLNRAFRVLLEMK  138 (262)
T ss_pred             HHhcCC------Cc--eEE-EcccchhhCC--Cc--c--CCCCCeEEEecC---------cccccHHHHHHHHHHHHcCC
Confidence            987641      11  211 1111111122  22  1  256777766221         37799999999999998876


Q ss_pred             CcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHc
Q 021350          186 IPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAA  263 (313)
Q Consensus       186 ~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~a  263 (313)
                      .+. |.-+..+.+.+..++++++|.+.+.+++ ++.+.+.+|||+|..|+.++..+|++|+++|||||++..|+.+|+++
T Consensus       139 k~~LIai~kgryykr~~Gl~lgpG~fv~aLeyatg~~a~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~  218 (262)
T KOG3040|consen  139 KPLLIAIGKGRYYKRVDGLCLGPGPFVAALEYATGCEATVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQAC  218 (262)
T ss_pred             CCeEEEecCceeeeeccccccCchHHHHHhhhccCceEEEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhh
Confidence            554 7778888999999999999999999998 58999999999999999999999999999999999999999999999


Q ss_pred             CCcEEEEcCCCCCCcc
Q 021350          264 GIQSVFIIGGIHATEL  279 (313)
Q Consensus       264 G~~~i~V~~G~~~~~~  279 (313)
                      ||+.|+|.||++...+
T Consensus       219 GMrgilVkTGK~rpsD  234 (262)
T KOG3040|consen  219 GMRGILVKTGKFRPSD  234 (262)
T ss_pred             cceeEEeeccccCCcc
Confidence            9999999999998865

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=100.00  E-value=9.6e-32  Score=236.87  Aligned_cols=223  Identities=32%  Similarity=0.510  Sum_probs=182.5

Q ss_pred             EEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCC-CCchHHHHHHHh-CCCCCcccccccchHHHHHHHHHhcC
Q 021350           33 WLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKS-LGFDPSLFAGAITSGELTHQYLLRRD  110 (313)
Q Consensus        33 iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~-~~~~~~~~~l~~-~G~~~~~~~~ii~~~~~~~~~l~~~~  110 (313)
                      ++||+||||+++.+++|++.++++.++++|+++.++||++ ++.+++.++|.+ +|++... +++++|+.++++||+++.
T Consensus         1 ~lfD~DGvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~-~~iits~~~~~~~l~~~~   79 (236)
T TIGR01460         1 FLFDIDGVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSP-DQIITSGSVTKDLLRQRF   79 (236)
T ss_pred             CEEeCcCccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCH-HHeeeHHHHHHHHHHHhC
Confidence            5899999999999999999999999999999999999966 777899999998 8998877 999999999999999765


Q ss_pred             chhhhhcCCeEEEeecCcccchhhccCCccc--cCCC------CCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 021350          111 DAWFAALGRSCIHMTWSDRGAISLEGLGLKV--VENV------EEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICA  182 (313)
Q Consensus       111 ~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~--~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  182 (313)
                      .      ++++++++.. .....++..|++.  .++.      +.++++++          +.+..++|..+..+...++
T Consensus        80 ~------~~~v~v~G~~-~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~vv~----------~~~~~~~~~~~~~a~~~l~  142 (236)
T TIGR01460        80 E------GEKVYVIGVG-ELRESLEGLGFRNDFFDDIDHLAIEKIPAAVIV----------GEPSDFSYDELAKAAYLLA  142 (236)
T ss_pred             C------CCEEEEECCH-HHHHHHHHcCCcCcccCcccccccCCCCeEEEE----------CCCCCcCHHHHHHHHHHHh
Confidence            2      5667776543 3455788888752  1111      11345555          3457788998888887765


Q ss_pred             hCCCcEEEEcCCccccccch-hccCCchHHHHHHHh-cCceeecCCCCHHHHHHHHHHhCCCCCcE-EEEcCCchhhHHH
Q 021350          183 SKKIPMVVANPDYVTVEARA-LRVMPGTLASKFEKL-GGEVRWMGKPDKIIYKSAMAMVGVDACDS-IAVGDSLHHDIKG  259 (313)
Q Consensus       183 ~~g~~~i~tn~d~~~~~~~~-~~~~~g~~~~~~~~~-~~~~~~~gKP~~~~~~~~~~~lgv~~~~~-v~IGDs~~~Di~~  259 (313)
                      +.+.++++||+|..++.... ..++.|.+...++.. +..+...|||+|..|+.++++++++++++ +||||++.+||.+
T Consensus       143 ~~~~~~i~tN~d~~~~~~~g~~~~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~  222 (236)
T TIGR01460       143 EGDVPFIAANRDDLVRLGDGRFRPGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILG  222 (236)
T ss_pred             CCCCeEEEECCCCCCCCCCCcEeecchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHH
Confidence            43389999998875555443 677888888888875 66667899999999999999999999997 9999998789999


Q ss_pred             HHHcCCcEEEEcCC
Q 021350          260 ANAAGIQSVFIIGG  273 (313)
Q Consensus       260 a~~aG~~~i~V~~G  273 (313)
                      |+++|+++++|+||
T Consensus       223 A~~~G~~~i~v~~G  236 (236)
T TIGR01460       223 AKNAGFDTLLVLTG  236 (236)
T ss_pred             HHHCCCcEEEEecC
Confidence            99999999999987

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.82  E-value=1.4e-20  Score=167.07  Aligned_cols=101  Identities=22%  Similarity=0.199  Sum_probs=80.9

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.++|..|+++|+++ ++||.........   +..-.+...|+. .+.+....+||+|+.|..++++++++|++|+
T Consensus       109 l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~---l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l  185 (248)
T PLN02770        109 PLNGLYKLKKWIEDRGLKRAAVTNAPRENAELM---ISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTF  185 (248)
T ss_pred             cCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHH---HHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEE
Confidence            3589999999999999998 8999765333221   111223444554 3555666789999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGI  274 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~  274 (313)
                      ||||+. .|+++|+++|+.+|+|.+|.
T Consensus       186 ~vgDs~-~Di~aA~~aGi~~i~v~~g~  211 (248)
T PLN02770        186 VFEDSV-SGIKAGVAAGMPVVGLTTRN  211 (248)
T ss_pred             EEcCCH-HHHHHHHHCCCEEEEEeCCC
Confidence            999997 99999999999999999985

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.81  E-value=4.7e-20  Score=160.84  Aligned_cols=105  Identities=27%  Similarity=0.348  Sum_probs=81.8

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHh-cCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.++|..+++.|+++ ++||........-   +....+...|... +.......||+|..+..+++++|++|++++
T Consensus        90 ~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~---l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l  166 (220)
T COG0546          90 LFPGVKELLAALKSAGYKLGIVTNKPERELDIL---LKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL  166 (220)
T ss_pred             cCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHH---HHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence            4689999999999999998 8998655322111   1112233344432 345567789999999999999999989999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      ||||+. +||++|++||+++|+|++|+...+
T Consensus       167 ~VGDs~-~Di~aA~~Ag~~~v~v~~g~~~~~  196 (220)
T COG0546         167 MVGDSL-NDILAAKAAGVPAVGVTWGYNSRE  196 (220)
T ss_pred             EECCCH-HHHHHHHHcCCCEEEEECCCCCCc
Confidence            999996 999999999999999999986333

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.81  E-value=7.2e-20  Score=159.43  Aligned_cols=105  Identities=22%  Similarity=0.323  Sum_probs=83.4

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.++|+.|+++|+++ ++||.........   +..-.+...++. ++......+||+|+.|..+++++|+++++|+
T Consensus        95 ~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~---l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~  171 (221)
T TIGR02253        95 VYPGVRDTLMELRESGYRLGIITDGLPVKQWEK---LERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAV  171 (221)
T ss_pred             CCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHH---HHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEE
Confidence            3579999999999999988 8899765332221   222234455554 3555667789999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIHAT  277 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~  277 (313)
                      ||||++.+|+.+|+++|+++|+|.+|....
T Consensus       172 ~igDs~~~di~~A~~aG~~~i~~~~~~~~~  201 (221)
T TIGR02253       172 MVGDRLDKDIKGAKNLGMKTVWINQGKSSK  201 (221)
T ss_pred             EECCChHHHHHHHHHCCCEEEEECCCCCcc
Confidence            999997689999999999999999987643

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.80  E-value=9.6e-20  Score=158.11  Aligned_cols=106  Identities=21%  Similarity=0.236  Sum_probs=81.4

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.++++.|+++|+++ ++||.........   +..-.+...+.. .+.+....+||+|..|..++++++++|++|+
T Consensus        83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~---l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~  159 (214)
T PRK13288         83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMG---LKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEAL  159 (214)
T ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHH---HHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEE
Confidence            3589999999999999998 8898654222111   111123334443 2445556789999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                      ||||+. +|+++|+++|+++++|.+|......
T Consensus       160 ~iGDs~-~Di~aa~~aG~~~i~v~~g~~~~~~  190 (214)
T PRK13288        160 MVGDNH-HDILAGKNAGTKTAGVAWTIKGREY  190 (214)
T ss_pred             EECCCH-HHHHHHHHCCCeEEEEcCCCCCHHH
Confidence            999997 9999999999999999999765543

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.80  E-value=9.1e-20  Score=160.01  Aligned_cols=104  Identities=23%  Similarity=0.266  Sum_probs=79.6

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++++.|+++|+++ ++||.........   +..-.+...++. .+......+||+|+.|..+++++|++|++|+|
T Consensus        97 ~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~---l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~  173 (229)
T PRK13226         97 FDGVEGMLQRLECAGCVWGIVTNKPEYLARLI---LPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVY  173 (229)
T ss_pred             CCCHHHHHHHHHHCCCeEEEECCCCHHHHHHH---HHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEE
Confidence            578999999999999998 8898654222111   111122333343 24444567899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      |||+. +|+++|+++|+.+|+|.+|.....
T Consensus       174 IGDs~-~Di~aA~~aG~~~i~v~~g~~~~~  202 (229)
T PRK13226        174 VGDDE-RDILAARAAGMPSVAALWGYRLHD  202 (229)
T ss_pred             eCCCH-HHHHHHHHCCCcEEEEeecCCCCC
Confidence            99996 999999999999999999986443

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.80  E-value=1.9e-19  Score=160.25  Aligned_cols=102  Identities=15%  Similarity=0.190  Sum_probs=77.8

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHH-HH-hcCceeecCCCCHHHHHHHHHHhCCC-CCc
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKF-EK-LGGEVRWMGKPDKIIYKSAMAMVGVD-ACD  245 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~-~~-~~~~~~~~gKP~~~~~~~~~~~lgv~-~~~  245 (313)
                      .++++.++|+.|+++|+++ ++||.........   +..-.+...+ +. ++.+....+||+|+.|..+++++|+. |++
T Consensus       100 ~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~---l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~  176 (253)
T TIGR01422       100 PIPGVIEVIAYLRARGIKIGSTTGYTREMMDVV---APEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAA  176 (253)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHH---HHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchh
Confidence            3589999999999999998 8888664322111   0000111221 22 24455567899999999999999995 999


Q ss_pred             EEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          246 SIAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       246 ~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      |+||||++ +|+++|+++|+.+|+|.+|..
T Consensus       177 ~l~IGDs~-~Di~aA~~aGi~~i~v~~g~~  205 (253)
T TIGR01422       177 CVKVGDTV-PDIEEGRNAGMWTVGLILSSN  205 (253)
T ss_pred             eEEECCcH-HHHHHHHHCCCeEEEEecCCc
Confidence            99999997 999999999999999999976

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.79  E-value=7e-19  Score=155.30  Aligned_cols=97  Identities=26%  Similarity=0.258  Sum_probs=78.2

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.++|..|+++ .++ ++||++...        ..-.+...++. .+......+||+|++|..+++++|++|++|+
T Consensus       114 ~~~gv~~~L~~L~~~-~~l~i~Tn~~~~~--------~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~  184 (238)
T PRK10748        114 VPQATHDTLKQLAKK-WPLVAITNGNAQP--------ELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEIL  184 (238)
T ss_pred             CCccHHHHHHHHHcC-CCEEEEECCCchH--------HHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEE
Confidence            357899999999765 666 889966531        11234556665 3556667889999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      ||||++..|+.+|+++|+.+++|..+..
T Consensus       185 ~VGD~~~~Di~~A~~aG~~~i~v~~~~~  212 (238)
T PRK10748        185 HVGDDLTTDVAGAIRCGMQACWINPENG  212 (238)
T ss_pred             EEcCCcHHHHHHHHHCCCeEEEEcCCCc
Confidence            9999965999999999999999988654

>PRK11587 putative phosphatase; Provisional

Probab=99.79  E-value=8.2e-20  Score=159.07  Aligned_cols=100  Identities=20%  Similarity=0.211  Sum_probs=75.3

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.++|..|+++|+++ ++||.............+   + ..+.. .+.+....+||+|+.|..+++++|++|++|+
T Consensus        84 ~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~---l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l  159 (218)
T PRK11587         84 ALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAG---L-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECV  159 (218)
T ss_pred             eCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcC---C-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEE
Confidence            3589999999999999999 889865432211100011   1 01111 2333445679999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGI  274 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~  274 (313)
                      ||||+. +|+++|+++|+.+|+|.+|.
T Consensus       160 ~igDs~-~di~aA~~aG~~~i~v~~~~  185 (218)
T PRK11587        160 VVEDAP-AGVLSGLAAGCHVIAVNAPA  185 (218)
T ss_pred             EEecch-hhhHHHHHCCCEEEEECCCC
Confidence            999996 99999999999999998765

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.79  E-value=3e-19  Score=160.32  Aligned_cols=102  Identities=13%  Similarity=0.121  Sum_probs=77.0

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHH-HHH-hcCceeecCCCCHHHHHHHHHHhCCC-CCc
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASK-FEK-LGGEVRWMGKPDKIIYKSAMAMVGVD-ACD  245 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~-~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~-~~~  245 (313)
                      .++++.++|..|+++|+++ ++||.........   +....+... ++. .+......+||+|+.|..+++++|++ +++
T Consensus       102 ~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~---l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e  178 (267)
T PRK13478        102 PIPGVLEVIAALRARGIKIGSTTGYTREMMDVV---VPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAA  178 (267)
T ss_pred             CCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHH---HHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcc
Confidence            3588999999999999998 8888655322110   000001111 122 24455567899999999999999996 799


Q ss_pred             EEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          246 SIAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       246 ~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      |+||||++ +|+++|+++|+.+|+|.+|..
T Consensus       179 ~l~IGDs~-~Di~aA~~aG~~~i~v~~g~~  207 (267)
T PRK13478        179 CVKVDDTV-PGIEEGLNAGMWTVGVILSGN  207 (267)
T ss_pred             eEEEcCcH-HHHHHHHHCCCEEEEEccCcc
Confidence            99999997 999999999999999999876

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.79  E-value=8e-19  Score=158.88  Aligned_cols=109  Identities=21%  Similarity=0.273  Sum_probs=79.5

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      .++++.++|..++++|+++ ++||.................+...+..+++.....+||+|++|..+++++|++|++|+|
T Consensus       145 l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~  224 (286)
T PLN02779        145 LRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRCVV  224 (286)
T ss_pred             chhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHHEEE
Confidence            3689999999999999999 889865422211000000000111111223444557899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                      |||+. +|+++|+++|+.+|+|.+|.+..+.
T Consensus       225 IGDs~-~Di~aA~~aG~~~i~v~~g~~~~~~  254 (286)
T PLN02779        225 VEDSV-IGLQAAKAAGMRCIVTKSSYTADED  254 (286)
T ss_pred             EeCCH-HhHHHHHHcCCEEEEEccCCccccc
Confidence            99997 9999999999999999998776544

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.78  E-value=5.4e-19  Score=153.93  Aligned_cols=106  Identities=21%  Similarity=0.230  Sum_probs=80.4

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHH--HHHHH-hcCceeecCCCCHHHHHHHHHHhCCC-CC
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLA--SKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVD-AC  244 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~--~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~-~~  244 (313)
                      .++++.+.++.++++|+++ ++||.........   +..-.+.  ..+.. .+......+||+|++|..+++++|++ |+
T Consensus        88 l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~---l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~  164 (220)
T TIGR03351        88 ALPGAEEAFRSLRSSGIKVALTTGFDRDTAERL---LEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQ  164 (220)
T ss_pred             cCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHH---HHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChh
Confidence            3578999999999999998 8998665322211   1111122  23333 24445557899999999999999997 79


Q ss_pred             cEEEEcCCchhhHHHHHHcCCcE-EEEcCCCCCCcc
Q 021350          245 DSIAVGDSLHHDIKGANAAGIQS-VFIIGGIHATEL  279 (313)
Q Consensus       245 ~~v~IGDs~~~Di~~a~~aG~~~-i~V~~G~~~~~~  279 (313)
                      +|+||||++ +|+++|+++|+.+ ++|.+|....+.
T Consensus       165 ~~~~igD~~-~Di~aa~~aG~~~~i~~~~g~~~~~~  199 (220)
T TIGR03351       165 SVAVAGDTP-NDLEAGINAGAGAVVGVLTGAHDAEE  199 (220)
T ss_pred             HeEEeCCCH-HHHHHHHHCCCCeEEEEecCCCcHHH
Confidence            999999997 9999999999999 999998765544

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>KOG1618 consensus Predicted phosphatase [General function prediction only]

Probab=99.77  E-value=1.6e-17  Score=145.90  Aligned_cols=226  Identities=25%  Similarity=0.347  Sum_probs=159.8

Q ss_pred             cEEEEeccceeecCCccCccHHHHHHHHHHC----CCcEEEEeCCCCCchH-HHHHH-HhCCCCCcccccccchHHHHHH
Q 021350           31 KAWLLDQFGVLHDGKKPYPGAISTLEMLATT----GAKMVVISNSSRRAST-TIDKL-KSLGFDPSLFAGAITSGELTHQ  104 (313)
Q Consensus        31 k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~----g~~~~~~Tn~~~~~~~-~~~~l-~~~G~~~~~~~~ii~~~~~~~~  104 (313)
                      =+|+||+||+|+.+..+++++.++++.|..+    .+|++++||.+...+. -++.+ ..+|++++. ++++.+......
T Consensus        36 fgfafDIDGVL~RG~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~Vs~-dqviqSHsP~r~  114 (389)
T KOG1618|consen   36 FGFAFDIDGVLFRGHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVEVSA-DQVIQSHSPFRL  114 (389)
T ss_pred             eeEEEecccEEEecCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCccCH-HHHHhhcChHHH
Confidence            4799999999999999999999999999988    7999999998877653 35555 469999999 999998877665


Q ss_pred             HHHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCC--------------------------------CCCCCEEE
Q 021350          105 YLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVEN--------------------------------VEEADFIL  152 (313)
Q Consensus       105 ~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~--------------------------------~~~~~~~~  152 (313)
                      ....++        +.+.+.+ ....+...+.+||+-+..                                ....++++
T Consensus       115 l~~~~~--------k~vLv~G-~~~vr~vAegyGFk~Vvt~D~l~k~f~~ldP~t~~~~~~k~~~~~R~~~~~r~ieAv~  185 (389)
T KOG1618|consen  115 LVEYHY--------KRVLVVG-QGSVREVAEGYGFKNVVTVDELAKYFPLLDPFTDLSRELKTTKLARDRELFRRIEAVL  185 (389)
T ss_pred             Hhhhhh--------ceEEEec-CCcHHHHhhccCccceeeHHHHHHhCCCcccccchhHhhhcccchhccccccceeEEE
Confidence            553333        2333333 222234556666552110                                01123343


Q ss_pred             ecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhC--------------CCcEEEEcCCccccccchh-ccCCchHHHHH---
Q 021350          153 AHGTEGMGLPSGDVRPMSLQDLEKILEICASK--------------KIPMVVANPDYVTVEARAL-RVMPGTLASKF---  214 (313)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--------------g~~~i~tn~d~~~~~~~~~-~~~~g~~~~~~---  214 (313)
                      +.+          |+.-...+++-+++.++..              .++++++|.|+.|+.+..+ +++.|.+.-++   
T Consensus       186 ~~~----------dPv~W~~dlQli~D~l~snG~~gt~~~a~~~~Phipiy~sN~DLlW~~e~~lpR~G~GaF~l~lesi  255 (389)
T KOG1618|consen  186 LLG----------DPVRWETDLQLIMDVLLSNGSPGTGRLATGPYPHIPIYASNMDLLWMAEYKLPRFGHGAFRLCLESI  255 (389)
T ss_pred             Eec----------CchhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCceEEecccccccccCCCccccchHHHHHHHHH
Confidence            322          1111123555555555442              2367899999999987764 67888776444   


Q ss_pred             -HHhcCc---eeecCCCCHHHHHHHHHHh--------CC-CCCcEEEEcCCchhhHHHHH---------------HcCCc
Q 021350          215 -EKLGGE---VRWMGKPDKIIYKSAMAMV--------GV-DACDSIAVGDSLHHDIKGAN---------------AAGIQ  266 (313)
Q Consensus       215 -~~~~~~---~~~~gKP~~~~~~~~~~~l--------gv-~~~~~v~IGDs~~~Di~~a~---------------~aG~~  266 (313)
                       ..+.++   .+.+|||++-.|++|...+        +. ++....||||++.+|+.+|+               .-||.
T Consensus       256 y~kltGk~L~~~t~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~  335 (389)
T KOG1618|consen  256 YQKLTGKPLRYTTLGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWI  335 (389)
T ss_pred             HHHhcCCcccccccCCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCce
Confidence             445443   4679999999999886543        22 67889999999999999997               77899


Q ss_pred             EEEEcCCCCC
Q 021350          267 SVFIIGGIHA  276 (313)
Q Consensus       267 ~i~V~~G~~~  276 (313)
                      +|+|.||.++
T Consensus       336 SILV~TGV~~  345 (389)
T KOG1618|consen  336 SILVRTGVYN  345 (389)
T ss_pred             EEEEeeeeec
Confidence            9999999987

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.77  E-value=4.8e-19  Score=157.98  Aligned_cols=102  Identities=20%  Similarity=0.288  Sum_probs=79.7

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++|..|+++|+++ ++||.........   +..-.+...++. ++......+||+|++|..+++++|++|++|+|
T Consensus       111 ~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~---l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~  187 (260)
T PLN03243        111 RPGSREFVQALKKHEIPIAVASTRPRRYLERA---IEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIV  187 (260)
T ss_pred             CCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHH---HHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEE
Confidence            589999999999999999 8999665322211   111224445554 35555667899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHAT  277 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~  277 (313)
                      |||+. +|+++|+++|+.+|+|. |....
T Consensus       188 IgDs~-~Di~aA~~aG~~~i~v~-g~~~~  214 (260)
T PLN03243        188 FGNSN-SSVEAAHDGCMKCVAVA-GKHPV  214 (260)
T ss_pred             EcCCH-HHHHHHHHcCCEEEEEe-cCCch
Confidence            99996 99999999999999996 54433

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.77  E-value=6.9e-19  Score=153.52  Aligned_cols=102  Identities=26%  Similarity=0.337  Sum_probs=78.6

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      ..+++.+.++.|+++++++ ++|+........   .+..-.+...|+. ..+....-+||+|+.|..++++||++|++|+
T Consensus        87 ~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~---~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cv  163 (221)
T COG0637          87 PIPGVVELLEQLKARGIPLAVASSSPRRAAER---VLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECV  163 (221)
T ss_pred             CCccHHHHHHHHHhcCCcEEEecCChHHHHHH---HHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeE
Confidence            3589999999999999998 566654321111   1222234445554 3556666779999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      +|+|+. ++|++|++|||.+|.|..+..
T Consensus       164 viEDs~-~Gi~Aa~aAGm~vv~v~~~~~  190 (221)
T COG0637         164 VVEDSP-AGIQAAKAAGMRVVGVPAGHD  190 (221)
T ss_pred             EEecch-hHHHHHHHCCCEEEEecCCCC
Confidence            999997 999999999999999998544

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=99.76  E-value=1.8e-18  Score=132.08  Aligned_cols=99  Identities=31%  Similarity=0.470  Sum_probs=82.2

Q ss_pred             EEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCC-CCchHHHHHHHhCCCCCcccccccchHHHHHHHHHhcCc
Q 021350           33 WLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDD  111 (313)
Q Consensus        33 iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~-~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l~~~~~  111 (313)
                      |+||+|||||++.+++|++.++|++|++.|++++++||++ ++++++.++|+++|++... ++|++|+.++++||+++..
T Consensus         1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~-~~i~ts~~~~~~~l~~~~~   79 (101)
T PF13344_consen    1 FLFDLDGVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDE-DEIITSGMAAAEYLKEHKG   79 (101)
T ss_dssp             EEEESTTTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--G-GGEEEHHHHHHHHHHHHTT
T ss_pred             CEEeCccEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCc-CEEEChHHHHHHHHHhcCC
Confidence            6899999999999999999999999999999999999977 4458999999999999988 9999999999999999543


Q ss_pred             hhhhhcCCeEEEeecCcccchhhccCCc
Q 021350          112 AWFAALGRSCIHMTWSDRGAISLEGLGL  139 (313)
Q Consensus       112 ~~~~~~g~~~~~~~~~~~~~~~l~~~g~  139 (313)
                            ++++|+++.. .....+++.|+
T Consensus        80 ------~~~v~vlG~~-~l~~~l~~~G~  100 (101)
T PF13344_consen   80 ------GKKVYVLGSD-GLREELREAGF  100 (101)
T ss_dssp             ------SSEEEEES-H-HHHHHHHHTTE
T ss_pred             ------CCEEEEEcCH-HHHHHHHHcCC
Confidence                  7888877644 33557777776

...

>PRK06769 hypothetical protein; Validated

Probab=99.76  E-value=2e-17  Score=138.95  Aligned_cols=51  Identities=22%  Similarity=0.309  Sum_probs=48.5

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCC
Q 021350          225 GKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHA  276 (313)
Q Consensus       225 gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~  276 (313)
                      .||+|+.|+.++++++++|++|+||||+. +|+.+|+++|+.+|+|.+|...
T Consensus        92 ~KP~p~~~~~~~~~l~~~p~~~i~IGD~~-~Di~aA~~aGi~~i~v~~g~~~  142 (173)
T PRK06769         92 RKPSTGMLLQAAEKHGLDLTQCAVIGDRW-TDIVAAAKVNATTILVRTGAGY  142 (173)
T ss_pred             CCCCHHHHHHHHHHcCCCHHHeEEEcCCH-HHHHHHHHCCCeEEEEecCCCc
Confidence            49999999999999999999999999996 9999999999999999998754

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.76  E-value=1.1e-18  Score=150.96  Aligned_cols=106  Identities=27%  Similarity=0.268  Sum_probs=81.6

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.++|+.++++|+++ ++||.........   +....+...++. .+......+||+|+.|..+++++|++|++|+
T Consensus        86 ~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~---l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~  162 (213)
T TIGR01449        86 VFPGVEATLGALRAKGLRLGLVTNKPTPLARPL---LELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMV  162 (213)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHH---HHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeE
Confidence            3578999999999999988 8898755322211   111122333333 3445556789999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                      ||||+. +|+++|+++|+.+++|.+|....+.
T Consensus       163 ~igDs~-~d~~aa~~aG~~~i~v~~g~~~~~~  193 (213)
T TIGR01449       163 YVGDSR-VDIQAARAAGCPSVLLTYGYRYGEA  193 (213)
T ss_pred             EeCCCH-HHHHHHHHCCCeEEEEccCCCCCcc
Confidence            999995 9999999999999999999875543

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.75  E-value=2.4e-17  Score=138.88  Aligned_cols=52  Identities=27%  Similarity=0.367  Sum_probs=48.5

Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcE-EEEcCCCCC
Q 021350          224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQS-VFIIGGIHA  276 (313)
Q Consensus       224 ~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~-i~V~~G~~~  276 (313)
                      .+||+|++|..+++++|+++++|+||||+. +||++|+++|+.+ ++|.+|...
T Consensus       104 ~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~-~Di~aA~~aG~~~~i~v~~g~~~  156 (176)
T TIGR00213       104 CRKPKPGMLLQARKELHIDMAQSYMVGDKL-EDMQAGVAAKVKTNVLVRTGKPI  156 (176)
T ss_pred             CCCCCHHHHHHHHHHcCcChhhEEEEcCCH-HHHHHHHHCCCcEEEEEecCCcc
Confidence            459999999999999999999999999996 9999999999998 899998653

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.75  E-value=2.4e-18  Score=150.14  Aligned_cols=104  Identities=21%  Similarity=0.320  Sum_probs=81.1

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.+++..++++|+++ ++||.........   +....+...++. .+......+||+|+.|..+++++|++|++|+
T Consensus        93 ~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~---l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  169 (222)
T PRK10826         93 LLPGVREALALCKAQGLKIGLASASPLHMLEAV---LTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV  169 (222)
T ss_pred             CCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHH---HHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence            4689999999999999998 8888655322211   111223344443 2445566899999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIHAT  277 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~  277 (313)
                      ||||+. +|+++|+++|+++|+|.++....
T Consensus       170 ~igDs~-~Di~aA~~aG~~~i~v~~~~~~~  198 (222)
T PRK10826        170 ALEDSF-NGMIAAKAARMRSIVVPAPEQQN  198 (222)
T ss_pred             EEcCCh-hhHHHHHHcCCEEEEecCCccCc
Confidence            999997 99999999999999999976544

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.74  E-value=2.9e-18  Score=158.94  Aligned_cols=101  Identities=20%  Similarity=0.268  Sum_probs=80.9

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.++|..|+++|+++ ++||.........   +..-.+...|+. .+.+....+||+|++|..+++++|++|++|+
T Consensus       217 l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~---L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl  293 (381)
T PLN02575        217 LRTGSQEFVNVLMNYKIPMALVSTRPRKTLENA---IGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCI  293 (381)
T ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHH---HHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            3589999999999999999 8998765322211   222234455555 3556666789999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGI  274 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~  274 (313)
                      ||||+. +||++|+++|+.+|+|.++.
T Consensus       294 ~IGDS~-~DIeAAk~AGm~~IgV~~~~  319 (381)
T PLN02575        294 VFGNSN-QTVEAAHDARMKCVAVASKH  319 (381)
T ss_pred             EEcCCH-HHHHHHHHcCCEEEEECCCC
Confidence            999996 99999999999999998764

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.74  E-value=4.4e-18  Score=146.68  Aligned_cols=106  Identities=19%  Similarity=0.247  Sum_probs=81.7

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.++++.|+++|+++ ++||.........   +..-.+...++. .+......+||+|+.|+.+++++|++|++|+
T Consensus        76 ~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~---l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l  152 (205)
T TIGR01454        76 VFPGVPELLAELRADGVGTAIATGKSGPRARSL---LEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAV  152 (205)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHH---HHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheE
Confidence            3578999999999999988 8898654322211   111122333343 2444456789999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                      ||||+. +|+++|+++|+++|+|.+|..+.++
T Consensus       153 ~igD~~-~Di~aA~~~Gi~~i~~~~g~~~~~~  183 (205)
T TIGR01454       153 MVGDAV-TDLASARAAGTATVAALWGEGDAGE  183 (205)
T ss_pred             EEcCCH-HHHHHHHHcCCeEEEEEecCCChhh
Confidence            999996 9999999999999999999876655

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PLN02940 riboflavin kinase

Probab=99.74  E-value=4.1e-18  Score=160.04  Aligned_cols=120  Identities=22%  Similarity=0.335  Sum_probs=87.6

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccC-CchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVM-PGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~-~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      ++++.++|+.|+++|+++ ++||.........   +. ...+...++. .+.+....+||+|++|..+++++|++|++|+
T Consensus        95 ~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~---l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l  171 (382)
T PLN02940         95 LPGANRLIKHLKSHGVPMALASNSPRANIEAK---ISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCL  171 (382)
T ss_pred             CcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHH---HHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEE
Confidence            588999999999999998 8999754322111   11 1223444444 3455566789999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHH
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLV  297 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~  297 (313)
                      ||||+. +|+++|+++|+++|+|.+|......   ...+...++++.++.
T Consensus       172 ~VGDs~-~Di~aA~~aGi~~I~v~~g~~~~~~---~~~ad~~i~sl~el~  217 (382)
T PLN02940        172 VIEDSL-PGVMAGKAAGMEVIAVPSIPKQTHL---YSSADEVINSLLDLQ  217 (382)
T ss_pred             EEeCCH-HHHHHHHHcCCEEEEECCCCcchhh---ccCccEEeCCHhHcC
Confidence            999997 9999999999999999998543322   123334455555553

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.73  E-value=6.7e-17  Score=136.73  Aligned_cols=53  Identities=34%  Similarity=0.446  Sum_probs=49.2

Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350          224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHAT  277 (313)
Q Consensus       224 ~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~  277 (313)
                      .+||+|..|..+++++|++|++|+||||+. +|+.+|+++|+.+++|.+|....
T Consensus       101 ~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~-~Di~~A~~aG~~~i~v~~g~~~~  153 (181)
T PRK08942        101 CRKPKPGMLLSIAERLNIDLAGSPMVGDSL-RDLQAAAAAGVTPVLVRTGKGVT  153 (181)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhEEEEeCCH-HHHHHHHHCCCeEEEEcCCCCch
Confidence            349999999999999999999999999996 99999999999999999987643

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.73  E-value=3.2e-17  Score=143.39  Aligned_cols=124  Identities=15%  Similarity=0.165  Sum_probs=91.9

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.++|..|+++|+++ ++||.........   +..-.+...++. ++......+||+|+.|+.+++++|++|++|+
T Consensus        94 ~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~---l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l  170 (224)
T PRK14988         94 LREDTVPFLEALKASGKRRILLTNAHPHNLAVK---LEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL  170 (224)
T ss_pred             cCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHH---HHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence            3588999999999999998 8898654322211   111234445554 3445566789999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCc-EEEEcCCCCCCcccccCCCCccchhhHHHHHhh
Q 021350          248 AVGDSLHHDIKGANAAGIQ-SVFIIGGIHATELGLDSYGEVADLSSVQTLVSK  299 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~-~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (313)
                      ||||+. .|+++|+++|+. ++.|.++.+..+.  ......++++++.+++..
T Consensus       171 ~igDs~-~di~aA~~aG~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~  220 (224)
T PRK14988        171 FIDDSE-PILDAAAQFGIRYCLGVTNPDSGIAE--KQYQRHPSLNDYRRLIPS  220 (224)
T ss_pred             EEcCCH-HHHHHHHHcCCeEEEEEeCCCCCccc--hhccCCCcHHHHHHHhhh
Confidence            999996 999999999997 4778887765544  233445677777776653

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.73  E-value=1.2e-17  Score=150.14  Aligned_cols=123  Identities=23%  Similarity=0.268  Sum_probs=87.2

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.++++.++++|+++ ++||.........   +..-.+...+.. .+.+....+||+|..|+.+++++|++|++|+
T Consensus       102 ~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~---l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l  178 (272)
T PRK13223        102 VYPGVRDTLKWLKKQGVEMALITNKPERFVAPL---LDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSL  178 (272)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHH---HHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence            3588999999999999888 8888654221110   111112233333 2344455689999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHH
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLV  297 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~  297 (313)
                      ||||+. +|+++|+++|+.+++|.+|....+.+.. ..+...++++.+++
T Consensus       179 ~IGD~~-~Di~aA~~aGi~~i~v~~G~~~~~~l~~-~~~~~vi~~l~el~  226 (272)
T PRK13223        179 FVGDSR-SDVLAAKAAGVQCVALSYGYNHGRPIAE-ESPALVIDDLRALL  226 (272)
T ss_pred             EECCCH-HHHHHHHHCCCeEEEEecCCCCchhhhh-cCCCEEECCHHHHH
Confidence            999995 9999999999999999999876655321 23444445555543

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.72  E-value=1.2e-17  Score=145.80  Aligned_cols=106  Identities=28%  Similarity=0.299  Sum_probs=79.7

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.+.++.+++.|+++ ++||............+   .+...+.. .+.+....+||+|++|+.+++++++++++|+
T Consensus        94 ~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i  170 (226)
T PRK13222         94 LYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEAL---GIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEML  170 (226)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheE
Confidence            3578999999999999888 88987653221111011   11222232 2444555789999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                      +|||+. +|+++|+++|+++++|.+|......
T Consensus       171 ~igD~~-~Di~~a~~~g~~~i~v~~g~~~~~~  201 (226)
T PRK13222        171 FVGDSR-NDIQAARAAGCPSVGVTYGYNYGEP  201 (226)
T ss_pred             EECCCH-HHHHHHHHCCCcEEEECcCCCCccc
Confidence            999996 9999999999999999998764443

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.72  E-value=2.4e-17  Score=141.31  Aligned_cols=100  Identities=18%  Similarity=0.267  Sum_probs=79.6

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++|+.|+++|+++ ++||.+.......   +..-.+...++. ++.+.....||+|++|..+++++|++|++|+|
T Consensus        94 ~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~---l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~  170 (198)
T TIGR01428        94 HPDVPAGLRALKERGYRLAILSNGSPAMLKSL---VKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLF  170 (198)
T ss_pred             CCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHH---HHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEE
Confidence            578899999999999998 8999765332221   111124445554 35556677899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGI  274 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~  274 (313)
                      |||+. +|+.+|+++|+.+|+|..+.
T Consensus       171 vgD~~-~Di~~A~~~G~~~i~v~r~~  195 (198)
T TIGR01428       171 VASNP-WDLGGAKKFGFKTAWVNRPG  195 (198)
T ss_pred             EeCCH-HHHHHHHHCCCcEEEecCCC
Confidence            99997 99999999999999998843

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=99.72  E-value=2.2e-17  Score=119.26  Aligned_cols=72  Identities=35%  Similarity=0.623  Sum_probs=65.8

Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCC
Q 021350          224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAY  303 (313)
Q Consensus       224 ~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (313)
                      +|||+|.+|..+++++++++++|+||||++.+||.+|+++|+.+|+|+||.++.++                 +......
T Consensus         2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~-----------------~~~~~~~   64 (75)
T PF13242_consen    2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPED-----------------LEKAEHK   64 (75)
T ss_dssp             CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCG-----------------HHHSSST
T ss_pred             CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHH-----------------HhccCCC
Confidence            68999999999999999999999999999669999999999999999999998876                 3334579


Q ss_pred             CcEEecCCc
Q 021350          304 PSYVLPSFS  312 (313)
Q Consensus       304 p~~~~~~l~  312 (313)
                      |+||+++|.
T Consensus        65 pd~vv~~l~   73 (75)
T PF13242_consen   65 PDYVVDDLK   73 (75)
T ss_dssp             TSEEESSGG
T ss_pred             CCEEECCHH
Confidence            999999984

...

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.71  E-value=4.3e-17  Score=140.19  Aligned_cols=95  Identities=25%  Similarity=0.347  Sum_probs=74.5

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++|..|+++|+++ ++||.+...  ..  .+....+...++. .+......+||+|+.|..+++++|++|++|+|
T Consensus       107 ~~g~~~~l~~L~~~g~~~~i~Sn~~~~~--~~--~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~  182 (203)
T TIGR02252       107 YPDAIKLLKDLRERGLILGVISNFDSRL--RG--LLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALH  182 (203)
T ss_pred             CcCHHHHHHHHHHCCCEEEEEeCCchhH--HH--HHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEE
Confidence            578999999999999988 899976522  11  1111233444544 34455677899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEE
Q 021350          249 VGDSLHHDIKGANAAGIQSVF  269 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~  269 (313)
                      |||++.+||++|+++|+.+||
T Consensus       183 IgD~~~~Di~~A~~aG~~~i~  203 (203)
T TIGR02252       183 IGDSLRNDYQGARAAGWRALL  203 (203)
T ss_pred             ECCCchHHHHHHHHcCCeeeC
Confidence            999976899999999999985

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.71  E-value=2.4e-17  Score=143.68  Aligned_cols=117  Identities=21%  Similarity=0.267  Sum_probs=80.1

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHH-H-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFE-K-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~-~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      ++++.+++..|   ++++ ++||........   .+..-.+...|. . +.......+||+|++|..+++++|++|++|+
T Consensus        90 ~~gv~~~L~~L---~~~~~ivTn~~~~~~~~---~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l  163 (221)
T PRK10563         90 IAGANALLESI---TVPMCVVSNGPVSKMQH---SLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCI  163 (221)
T ss_pred             CCCHHHHHHHc---CCCEEEEeCCcHHHHHH---HHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence            46778888776   3677 889876432211   111123344443 2 2334456789999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHH
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLV  297 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~  297 (313)
                      ||||+. +||++|+++|+++|++.++....+.   ..++...++++.++.
T Consensus       164 ~igDs~-~di~aA~~aG~~~i~~~~~~~~~~~---~~~~~~~~~~~~~l~  209 (221)
T PRK10563        164 LVDDSS-AGAQSGIAAGMEVFYFCADPHNKPI---DHPLVTTFTDLAQLP  209 (221)
T ss_pred             EEeCcH-hhHHHHHHCCCEEEEECCCCCCcch---hhhhhHHHHHHHHHH
Confidence            999997 9999999999999999876554321   123333455555543

>PRK09449 dUMP phosphatase; Provisional

Probab=99.70  E-value=1.5e-16  Score=138.94  Aligned_cols=100  Identities=26%  Similarity=0.358  Sum_probs=76.2

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCC-CCcE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVD-ACDS  246 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~-~~~~  246 (313)
                      .++++.++|+.|+ +++++ ++||........   .+..-.+...|+. ..+......||+|++|..+++++|+. +++|
T Consensus        96 ~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~---~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~  171 (224)
T PRK09449         96 PLPGAVELLNALR-GKVKMGIITNGFTELQQV---RLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRV  171 (224)
T ss_pred             cCccHHHHHHHHH-hCCeEEEEeCCcHHHHHH---HHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccE
Confidence            3588999999998 57887 889965432211   1222234455554 35566677899999999999999985 5899


Q ss_pred             EEEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350          247 IAVGDSLHHDIKGANAAGIQSVFIIGG  273 (313)
Q Consensus       247 v~IGDs~~~Di~~a~~aG~~~i~V~~G  273 (313)
                      +||||+..+|+++|+++|+.++++.++
T Consensus       172 ~~vgD~~~~Di~~A~~aG~~~i~~~~~  198 (224)
T PRK09449        172 LMVGDNLHSDILGGINAGIDTCWLNAH  198 (224)
T ss_pred             EEEcCCcHHHHHHHHHCCCcEEEECCC
Confidence            999999756999999999999999865

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.70  E-value=2.6e-17  Score=139.72  Aligned_cols=92  Identities=20%  Similarity=0.266  Sum_probs=69.1

Q ss_pred             HHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCC
Q 021350          175 EKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDS  252 (313)
Q Consensus       175 ~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs  252 (313)
                      .+.|..++++ .++ ++||........   .+..-.+...++. .+.+....+||+|++|+.+++++|++|++|+||||+
T Consensus        93 ~e~L~~L~~~-~~l~I~T~~~~~~~~~---~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs  168 (188)
T PRK10725         93 IEVVKAWHGR-RPMAVGTGSESAIAEA---LLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDA  168 (188)
T ss_pred             HHHHHHHHhC-CCEEEEcCCchHHHHH---HHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEecc
Confidence            4677777654 677 788865432221   1222234455554 355566778999999999999999999999999999


Q ss_pred             chhhHHHHHHcCCcEEEEc
Q 021350          253 LHHDIKGANAAGIQSVFII  271 (313)
Q Consensus       253 ~~~Di~~a~~aG~~~i~V~  271 (313)
                      . +|+++|+++|+++|+|.
T Consensus       169 ~-~di~aA~~aG~~~i~~~  186 (188)
T PRK10725        169 D-FGIQAARAAGMDAVDVR  186 (188)
T ss_pred             H-hhHHHHHHCCCEEEeec
Confidence            5 99999999999999985

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.70  E-value=2.7e-16  Score=128.51  Aligned_cols=48  Identities=35%  Similarity=0.612  Sum_probs=45.7

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350          225 GKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGG  273 (313)
Q Consensus       225 gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G  273 (313)
                      .||+|++|+.+++++++++++|+||||+ ..|+++|+++|+++++|..|
T Consensus       100 ~KP~~~~~~~~~~~~~~~~~e~i~IGDs-~~Di~~A~~~Gi~~v~i~~~  147 (147)
T TIGR01656       100 RKPKPGLILEALKRLGVDASRSLVVGDR-LRDLQAARNAGLAAVLLVDG  147 (147)
T ss_pred             CCCCHHHHHHHHHHcCCChHHEEEEcCC-HHHHHHHHHCCCCEEEecCC
Confidence            3999999999999999999999999999 59999999999999999865

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.70  E-value=2.2e-17  Score=139.70  Aligned_cols=96  Identities=21%  Similarity=0.283  Sum_probs=74.7

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.++|+.|+++|+++ ++||....   ..  .+..-.+...++. ++......+||+|++|..++++++++|++|+
T Consensus        88 ~~pg~~~~L~~L~~~g~~~~i~s~~~~~---~~--~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v  162 (185)
T TIGR01990        88 VLPGIKNLLDDLKKNNIKIALASASKNA---PT--VLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECI  162 (185)
T ss_pred             cCccHHHHHHHHHHCCCeEEEEeCCccH---HH--HHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence            3589999999999999998 78875321   11  1111233344444 3445556789999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEc
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFII  271 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~  271 (313)
                      ||||+. +|+++|+++|+++|+|+
T Consensus       163 ~vgD~~-~di~aA~~aG~~~i~v~  185 (185)
T TIGR01990       163 GIEDAQ-AGIEAIKAAGMFAVGVG  185 (185)
T ss_pred             EEecCH-HHHHHHHHcCCEEEecC
Confidence            999996 99999999999999884

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.70  E-value=2.3e-16  Score=126.45  Aligned_cols=46  Identities=26%  Similarity=0.452  Sum_probs=42.9

Q ss_pred             CCCHHHHHHHHHHh-CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEc
Q 021350          226 KPDKIIYKSAMAMV-GVDACDSIAVGDSLHHDIKGANAAGIQSVFII  271 (313)
Q Consensus       226 KP~~~~~~~~~~~l-gv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~  271 (313)
                      ||+|++|+.+++++ +++|++|+||||+..+|+.+|+++|+.+|+|.
T Consensus        85 KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~  131 (132)
T TIGR01662        85 KPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA  131 (132)
T ss_pred             CCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence            99999999999999 59999999999942599999999999999986

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.69  E-value=1.1e-16  Score=139.49  Aligned_cols=102  Identities=26%  Similarity=0.372  Sum_probs=78.3

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHh-CCCCCcEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMV-GVDACDSI  247 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~l-gv~~~~~v  247 (313)
                      ++++.++++.++++ .++ ++||........   .+..-.+...++. ++.......||+|.+|..+++++ |++|++|+
T Consensus        99 ~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~---~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v  174 (224)
T TIGR02254        99 LPGAFELMENLQQK-FRLYIVTNGVRETQYK---RLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVL  174 (224)
T ss_pred             CccHHHHHHHHHhc-CcEEEEeCCchHHHHH---HHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheE
Confidence            47889999999888 777 889865422211   1111233444554 35556677899999999999999 99999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCCC
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIHA  276 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~  276 (313)
                      ||||+..+|+++|+++|+++|++.+|...
T Consensus       175 ~igD~~~~di~~A~~~G~~~i~~~~~~~~  203 (224)
T TIGR02254       175 MIGDSLTADIKGGQNAGLDTCWMNPDMHP  203 (224)
T ss_pred             EECCCcHHHHHHHHHCCCcEEEECCCCCC
Confidence            99999647999999999999999987544

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.69  E-value=2e-16  Score=142.15  Aligned_cols=102  Identities=18%  Similarity=0.255  Sum_probs=74.3

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHh-cCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++|+.|+++|+++ ++||..........   ..-.+...++.. +....   +++++.|..++++++++|++|+|
T Consensus       144 ~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L---~~~gl~~~F~~vi~~~~~---~~k~~~~~~~l~~~~~~p~~~l~  217 (273)
T PRK13225        144 FPGVADLLAQLRSRSLCLGILSSNSRQNIEAFL---QRQGLRSLFSVVQAGTPI---LSKRRALSQLVAREGWQPAAVMY  217 (273)
T ss_pred             CCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH---HHcCChhheEEEEecCCC---CCCHHHHHHHHHHhCcChhHEEE
Confidence            588999999999999999 88986653222111   001122222221 11111   34567999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                      |||+. .|+++|+++|+.+|+|.+|....+.
T Consensus       218 IGDs~-~Di~aA~~AG~~~I~v~~g~~~~~~  247 (273)
T PRK13225        218 VGDET-RDVEAARQVGLIAVAVTWGFNDRQS  247 (273)
T ss_pred             ECCCH-HHHHHHHHCCCeEEEEecCCCCHHH
Confidence            99996 9999999999999999999776554

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.68  E-value=7.8e-17  Score=140.83  Aligned_cols=103  Identities=27%  Similarity=0.364  Sum_probs=82.3

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.+.|+.++++ +++ ++||+....+...   +...++...|+. +.+...+..||+|.+|+.+++++|++|++|+
T Consensus       100 ~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~---l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l  175 (229)
T COG1011         100 DYPEALEALKELGKK-YKLGILTNGARPHQERK---LRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEAL  175 (229)
T ss_pred             cChhHHHHHHHHHhh-ccEEEEeCCChHHHHHH---HHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEE
Confidence            357888888888777 777 8999755433332   222226667776 4667777899999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCCC
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIHA  276 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~  276 (313)
                      ||||++.+||.+|+++|++++||..+...
T Consensus       176 ~VgD~~~~di~gA~~~G~~~vwi~~~~~~  204 (229)
T COG1011         176 FVGDSLENDILGARALGMKTVWINRGGKP  204 (229)
T ss_pred             EECCChhhhhHHHHhcCcEEEEECCCCCC
Confidence            99999999999999999999999986553

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.68  E-value=2.7e-17  Score=139.16  Aligned_cols=95  Identities=22%  Similarity=0.332  Sum_probs=73.0

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.+++..++++|+++ ++||...  . ..  .+..-.+...++. .+.......||+|++|..++++++++|++|+
T Consensus        89 ~~~g~~~~l~~l~~~g~~i~i~S~~~~--~-~~--~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v  163 (185)
T TIGR02009        89 VLPGIENFLKRLKKKGIAVGLGSSSKN--A-DR--ILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECV  163 (185)
T ss_pred             CCcCHHHHHHHHHHcCCeEEEEeCchh--H-HH--HHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeE
Confidence            4689999999999999998 7787611  1 11  1111233344443 2444556789999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEE
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFI  270 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V  270 (313)
                      ||||+. .|+++|+++|+++|.|
T Consensus       164 ~IgD~~-~di~aA~~~G~~~i~v  185 (185)
T TIGR02009       164 VFEDAL-AGVQAARAAGMFAVAV  185 (185)
T ss_pred             EEeCcH-hhHHHHHHCCCeEeeC
Confidence            999996 9999999999999875

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=99.68  E-value=5.3e-16  Score=129.88  Aligned_cols=55  Identities=24%  Similarity=0.396  Sum_probs=51.5

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccc
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELG  280 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~  280 (313)
                      ||+|.+|..+++++++++++|+||||++.+|+++|+++|+.+|+|.+|..+.+..
T Consensus        91 KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~~~~  145 (170)
T TIGR01668        91 KPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVHPDQWF  145 (170)
T ss_pred             CCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcCCcccc
Confidence            9999999999999999999999999997579999999999999999998877653

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.66  E-value=7.6e-16  Score=133.27  Aligned_cols=104  Identities=22%  Similarity=0.344  Sum_probs=83.4

Q ss_pred             HHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEE
Q 021350          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAV  249 (313)
Q Consensus       172 ~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~I  249 (313)
                      ++..+++..++++|..+ ++||-|...+.    .+.+-.+...++. +.+...+.-||+|.+|+.+++++++.|++|++|
T Consensus       116 ~~~~~~lq~lR~~g~~l~iisN~d~r~~~----~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vhI  191 (237)
T KOG3085|consen  116 DGMQELLQKLRKKGTILGIISNFDDRLRL----LLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECVHI  191 (237)
T ss_pred             cHHHHHHHHHHhCCeEEEEecCCcHHHHH----HhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeEEe
Confidence            56669999999999666 88997775542    1223344466665 456667788999999999999999999999999


Q ss_pred             cCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          250 GDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       250 GDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                      ||+++||+++|+++||++++|....+....
T Consensus       192 gD~l~nD~~gA~~~G~~ailv~~~~~~~~~  221 (237)
T KOG3085|consen  192 GDLLENDYEGARNLGWHAILVDNSITALKE  221 (237)
T ss_pred             cCccccccHhHHHcCCEEEEEccccchhhh
Confidence            999999999999999999999976554443

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.66  E-value=1.1e-15  Score=132.22  Aligned_cols=104  Identities=18%  Similarity=0.271  Sum_probs=78.2

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.+++..|+++|+++ ++||.......... ......+...++. .+.......||+|.+|+.+++++|++|++|+
T Consensus        95 ~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~-~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~~l  173 (211)
T TIGR02247        95 LRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEE-ALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEECV  173 (211)
T ss_pred             cChhHHHHHHHHHHCCCeEEEEeCCCCccchhhh-HhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence            3688999999999999998 88986432211100 1111223344444 2445556789999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      ||||+. .|+.+|+++|+.+|+|.++..
T Consensus       174 ~i~D~~-~di~aA~~aG~~~i~v~~~~~  200 (211)
T TIGR02247       174 FLDDLG-SNLKPAAALGITTIKVSDEEQ  200 (211)
T ss_pred             EEcCCH-HHHHHHHHcCCEEEEECCHHH
Confidence            999995 999999999999999987533

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=99.65  E-value=4.2e-15  Score=133.46  Aligned_cols=59  Identities=22%  Similarity=0.343  Sum_probs=52.8

Q ss_pred             cCccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      |.+|+|+||+||||+++.+ +.|.+.++|++++++|+.++++|  ||+...+...++++|+.
T Consensus         1 M~~kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~G~~~~iaT--GR~~~~~~~~~~~l~~~   60 (272)
T PRK10530          1 MTYRVIALDLDGTLLTPKKTILPESLEALARAREAGYKVIIVT--GRHHVAIHPFYQALALD   60 (272)
T ss_pred             CCccEEEEeCCCceECCCCccCHHHHHHHHHHHHCCCEEEEEc--CCChHHHHHHHHhcCCC
Confidence            4689999999999999765 56789999999999999999999  99988888888888876

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.65  E-value=6.7e-16  Score=161.17  Aligned_cols=102  Identities=21%  Similarity=0.397  Sum_probs=79.7

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchH-HHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTL-ASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDS  246 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~-~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~  246 (313)
                      .++++.++++.|+++|+++ |+||.........   +..-.+ ...|+. .+......+||+|++|+.++++++++|++|
T Consensus       162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~---L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~  238 (1057)
T PLN02919        162 GFPGALELITQCKNKGLKVAVASSADRIKVDAN---LAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSEC  238 (1057)
T ss_pred             cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHH---HHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccE
Confidence            4689999999999999999 8999765332211   111111 123333 244556678999999999999999999999


Q ss_pred             EEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          247 IAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       247 v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      +||||+. .|+++|+++|+++|+|.+|..
T Consensus       239 v~IgDs~-~Di~AA~~aGm~~I~v~~~~~  266 (1057)
T PLN02919        239 VVIEDAL-AGVQAARAAGMRCIAVTTTLS  266 (1057)
T ss_pred             EEEcCCH-HHHHHHHHcCCEEEEECCCCC
Confidence            9999997 999999999999999999864

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.65  E-value=1.6e-15  Score=130.14  Aligned_cols=104  Identities=18%  Similarity=0.232  Sum_probs=80.0

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++++.++++|+++ ++||.........  .-....+...++. +.......+||+|++|+.+++++|++|++|++
T Consensus        86 ~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~--~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~  163 (199)
T PRK09456         86 RPEVIAIMHKLREQGHRVVVLSNTNRLHTTFW--PEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVF  163 (199)
T ss_pred             CHHHHHHHHHHHhCCCcEEEEcCCchhhHHHH--HhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEE
Confidence            589999999999999998 8898654221100  0001123344444 35566778899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHAT  277 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~  277 (313)
                      |||+. .|+++|+++|+.++++..+..-.
T Consensus       164 vgD~~-~di~aA~~aG~~~i~~~~~~~~~  191 (199)
T PRK09456        164 FDDNA-DNIEAANALGITSILVTDKQTIP  191 (199)
T ss_pred             eCCCH-HHHHHHHHcCCEEEEecCCccHH
Confidence            99996 99999999999999998865543

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.63  E-value=3.1e-15  Score=124.64  Aligned_cols=45  Identities=24%  Similarity=0.319  Sum_probs=41.1

Q ss_pred             CCCCHHHHHHHHHHhC--CCCCcEEEEcCCc-------hhhHHHHHHcCCcEEE
Q 021350          225 GKPDKIIYKSAMAMVG--VDACDSIAVGDSL-------HHDIKGANAAGIQSVF  269 (313)
Q Consensus       225 gKP~~~~~~~~~~~lg--v~~~~~v~IGDs~-------~~Di~~a~~aG~~~i~  269 (313)
                      .||+|+.++.+++++|  +++++++||||+.       .+|+++|+++|+.+++
T Consensus       107 ~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~  160 (166)
T TIGR01664       107 RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY  160 (166)
T ss_pred             CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence            3999999999999999  9999999999994       3699999999998864

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=99.63  E-value=9.9e-15  Score=120.89  Aligned_cols=53  Identities=19%  Similarity=0.192  Sum_probs=49.4

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          225 GKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       225 gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      .||+|..|..+++++++++++|+||||+. +|+++|+++|+.+++|.+|.-...
T Consensus       102 ~KP~~~~~~~~~~~~~~~~~e~l~IGD~~-~Di~~A~~aGi~~i~~~~~~~~~~  154 (161)
T TIGR01261       102 RKPKIKLLEPYLKKNLIDKARSYVIGDRE-TDMQLAENLGIRGIQYDEEELNWD  154 (161)
T ss_pred             CCCCHHHHHHHHHHcCCCHHHeEEEeCCH-HHHHHHHHCCCeEEEEChhhcCHH
Confidence            49999999999999999999999999995 999999999999999999876554

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=99.61  E-value=4.7e-15  Score=119.57  Aligned_cols=47  Identities=26%  Similarity=0.496  Sum_probs=46.0

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIG  272 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~  272 (313)
                      ||.+..|..|++.+++++++|+||||.+.||+.+|+.+|+.||+|..
T Consensus        93 KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P  139 (175)
T COG2179          93 KPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP  139 (175)
T ss_pred             CccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence            99999999999999999999999999999999999999999999966

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.61  E-value=1.5e-15  Score=146.35  Aligned_cols=103  Identities=17%  Similarity=0.105  Sum_probs=75.7

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHh-cCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.++|+.|+++|+++ ++||.........   +..-.+...|+.. +.+.. .+||+|+.|..+++++  +|++|+
T Consensus       331 l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~---l~~~~l~~~f~~i~~~d~v-~~~~kP~~~~~al~~l--~~~~~v  404 (459)
T PRK06698        331 LYPNVKEIFTYIKENNCSIYIASNGLTEYLRAI---VSYYDLDQWVTETFSIEQI-NSLNKSDLVKSILNKY--DIKEAA  404 (459)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHH---HHHCCcHhhcceeEecCCC-CCCCCcHHHHHHHHhc--CcceEE
Confidence            3689999999999999999 8999765333221   1112233444432 33222 3477888999999987  479999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                      ||||+. +|+++|+++|+.+|+|.+|....+.
T Consensus       405 ~VGDs~-~Di~aAk~AG~~~I~v~~~~~~~~~  435 (459)
T PRK06698        405 VVGDRL-SDINAAKDNGLIAIGCNFDFAQEDE  435 (459)
T ss_pred             EEeCCH-HHHHHHHHCCCeEEEEeCCCCcccc
Confidence            999996 9999999999999999998765543

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.60  E-value=6.5e-16  Score=130.18  Aligned_cols=95  Identities=26%  Similarity=0.330  Sum_probs=74.6

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.+.++.++++|+++ ++||..... ...   .....+...++. +.+.....+||+|..|+.+++++|++|++|+|
T Consensus        87 ~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~---~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~  162 (183)
T TIGR01509        87 LPGVEPLLEALRARGKKLALLTNSPRDH-AVL---VQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLF  162 (183)
T ss_pred             CcCHHHHHHHHHHCCCeEEEEeCCchHH-HHH---HHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEE
Confidence            578999999999999988 899976643 111   110223334443 34455668999999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEE
Q 021350          249 VGDSLHHDIKGANAAGIQSVFI  270 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V  270 (313)
                      |||+. .|+++|+++|+.+|+|
T Consensus       163 vgD~~-~di~aA~~~G~~~i~v  183 (183)
T TIGR01509       163 VDDSP-AGIEAAKAAGMHTVLV  183 (183)
T ss_pred             EcCCH-HHHHHHHHcCCEEEeC
Confidence            99997 9999999999999986

HAD subfamilies caused by an overly broad single model.

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.58  E-value=2.4e-15  Score=127.38  Aligned_cols=95  Identities=21%  Similarity=0.263  Sum_probs=68.5

Q ss_pred             CHHHHHHHHHHHHhCCCcEEEEcCCccccccchhccCCchHHHHHHH-hcCceeec----CCCCHHHHHHHHHHhCCCCC
Q 021350          170 SLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWM----GKPDKIIYKSAMAMVGVDAC  244 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~----gKP~~~~~~~~~~~lgv~~~  244 (313)
                      .++++.++|+.|+  +...++||.........   +..-.+...++. .+......    .||+|++|+.+++++|++|+
T Consensus        85 ~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~---l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~  159 (184)
T TIGR01993        85 PDPELRNLLLRLP--GRKIIFTNGDRAHARRA---LNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE  159 (184)
T ss_pred             CCHHHHHHHHhCC--CCEEEEeCCCHHHHHHH---HHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc
Confidence            3578899988875  33348898765332221   111123344443 23333333    59999999999999999999


Q ss_pred             cEEEEcCCchhhHHHHHHcCCcEEEE
Q 021350          245 DSIAVGDSLHHDIKGANAAGIQSVFI  270 (313)
Q Consensus       245 ~~v~IGDs~~~Di~~a~~aG~~~i~V  270 (313)
                      +|+||||+. .|+++|+++|+++|+|
T Consensus       160 ~~l~vgD~~-~di~aA~~~G~~~i~v  184 (184)
T TIGR01993       160 RAIFFDDSA-RNIAAAKALGMKTVLV  184 (184)
T ss_pred             ceEEEeCCH-HHHHHHHHcCCEEeeC
Confidence            999999996 9999999999999986

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=99.57  E-value=1.5e-13  Score=120.40  Aligned_cols=59  Identities=15%  Similarity=0.194  Sum_probs=52.0

Q ss_pred             cCccEEEEeccceeecCCcc-CccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           28 RRFKAWLLDQFGVLHDGKKP-YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~~~-~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      |.+|+|+||+||||+++.+. .+.+.++|++++++|++++++|  ||+...+...++.+|++
T Consensus         1 m~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaT--GR~~~~~~~~~~~l~~~   60 (230)
T PRK01158          1 MKIKAIAIDIDGTITDKDRRLSLKAVEAIRKAEKLGIPVILAT--GNVLCFARAAAKLIGTS   60 (230)
T ss_pred             CceeEEEEecCCCcCCCCCccCHHHHHHHHHHHHCCCEEEEEc--CCchHHHHHHHHHhCCC
Confidence            46899999999999997764 4689999999999999999999  98888888888888876

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=99.57  E-value=7.6e-14  Score=125.29  Aligned_cols=60  Identities=18%  Similarity=0.191  Sum_probs=53.2

Q ss_pred             cCccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350           28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~   89 (313)
                      |.+|+|+||+||||+++.+ +.+.+.++|++++++|+.++++|  ||+...+...++++|+..
T Consensus         1 m~~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaT--GR~~~~~~~~~~~l~~~~   61 (270)
T PRK10513          1 MAIKLIAIDMDGTLLLPDHTISPAVKQAIAAARAKGVNVVLTT--GRPYAGVHRYLKELHMEQ   61 (270)
T ss_pred             CceEEEEEecCCcCcCCCCccCHHHHHHHHHHHHCCCEEEEec--CCChHHHHHHHHHhCCCC
Confidence            4689999999999999765 55789999999999999999999  999988888889888864

>PLN02811 hydrolase

Probab=99.56  E-value=5.3e-15  Score=128.97  Aligned_cols=106  Identities=19%  Similarity=0.271  Sum_probs=80.6

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCc--eeecCCCCHHHHHHHHHHhC---CC
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGE--VRWMGKPDKIIYKSAMAMVG---VD  242 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~--~~~~gKP~~~~~~~~~~~lg---v~  242 (313)
                      .++++.++++.|+++|+++ ++||.........  ......+...++. .+..  ....+||+|++|..++++++   ++
T Consensus        79 l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~--~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~  156 (220)
T PLN02811         79 LMPGAERLVRHLHAKGIPIAIATGSHKRHFDLK--TQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVD  156 (220)
T ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCchhhHHHH--HcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCC
Confidence            3689999999999999999 8888654221111  1111233344443 2444  45678999999999999996   99


Q ss_pred             CCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          243 ACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       243 ~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      |++|+||||+. .|+++|+++|+++|+|.+|.....
T Consensus       157 ~~~~v~IgDs~-~di~aA~~aG~~~i~v~~~~~~~~  191 (220)
T PLN02811        157 PGKVLVFEDAP-SGVEAAKNAGMSVVMVPDPRLDKS  191 (220)
T ss_pred             ccceEEEeccH-hhHHHHHHCCCeEEEEeCCCCcHh
Confidence            99999999997 999999999999999999875543

>PHA02597 30

Probab=99.56  E-value=4.1e-14  Score=121.16  Aligned_cols=97  Identities=13%  Similarity=0.120  Sum_probs=67.9

Q ss_pred             CHHHHHHHHHHHHhCCCcEEEEcCCccccccchhccCCchHHHH----HHH-hcCceeecCCCCHHHHHHHHHHhCCCCC
Q 021350          170 SLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASK----FEK-LGGEVRWMGKPDKIIYKSAMAMVGVDAC  244 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~i~tn~d~~~~~~~~~~~~~g~~~~~----~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~  244 (313)
                      .++++.++|..|++.+..+++||............+   .+...    ++. .+.+   ..||+|+.|+.+++++|  |+
T Consensus        75 ~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~---~l~~~f~~~f~~i~~~~---~~~~kp~~~~~a~~~~~--~~  146 (197)
T PHA02597         75 AYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQF---NLNALFPGAFSEVLMCG---HDESKEKLFIKAKEKYG--DR  146 (197)
T ss_pred             CCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhC---CHHHhCCCcccEEEEec---cCcccHHHHHHHHHHhC--CC
Confidence            468999999999887544477875542221111011   11221    121 1122   24788899999999999  89


Q ss_pred             cEEEEcCCchhhHHHHHHc--CCcEEEEcCCCC
Q 021350          245 DSIAVGDSLHHDIKGANAA--GIQSVFIIGGIH  275 (313)
Q Consensus       245 ~~v~IGDs~~~Di~~a~~a--G~~~i~V~~G~~  275 (313)
                      +|+||||+. +|+.+|+++  |+++|+|.+|..
T Consensus       147 ~~v~vgDs~-~di~aA~~a~~Gi~~i~~~~~~~  178 (197)
T PHA02597        147 VVCFVDDLA-HNLDAAHEALSQLPVIHMLRGER  178 (197)
T ss_pred             cEEEeCCCH-HHHHHHHHHHcCCcEEEecchhh
Confidence            999999996 999999999  999999999853

2 hypothetical protein; Provisional

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=99.56  E-value=3e-14  Score=122.84  Aligned_cols=100  Identities=24%  Similarity=0.320  Sum_probs=77.0

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH--h-cCceeecCCCCHHHHHHHHHHhCCCC-C
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK--L-GGEVRWMGKPDKIIYKSAMAMVGVDA-C  244 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~--~-~~~~~~~gKP~~~~~~~~~~~lgv~~-~  244 (313)
                      ..+++++.++.|+.+|+++ ++|+.+.....-+.  -..+.+...|..  . +......|||+|++|..+++++|.+| +
T Consensus        93 ~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~--~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~  170 (222)
T KOG2914|consen   93 LMPGAEKLVNHLKNNGIPVALATSSTSASFELKI--SRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPPS  170 (222)
T ss_pred             cCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHH--HHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCcc
Confidence            3479999999999999999 88886542221111  001223333333  2 23456789999999999999999999 9


Q ss_pred             cEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350          245 DSIAVGDSLHHDIKGANAAGIQSVFIIG  272 (313)
Q Consensus       245 ~~v~IGDs~~~Di~~a~~aG~~~i~V~~  272 (313)
                      .|++++|++ ..+++|++||+++|+|.+
T Consensus       171 k~lVfeds~-~Gv~aa~aagm~vi~v~~  197 (222)
T KOG2914|consen  171 KCLVFEDSP-VGVQAAKAAGMQVVGVAT  197 (222)
T ss_pred             ceEEECCCH-HHHHHHHhcCCeEEEecC
Confidence            999999997 999999999999999999

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=99.55  E-value=8.6e-14  Score=125.19  Aligned_cols=57  Identities=19%  Similarity=0.142  Sum_probs=51.6

Q ss_pred             ccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           30 FKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        30 ~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      +|+|+||+||||++.++ +.+.+.++|++++++|+.++++|  ||+...+...++++|++
T Consensus         2 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaT--GR~~~~~~~~~~~l~~~   59 (272)
T PRK15126          2 ARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFAT--GRHVLEMQHILGALSLD   59 (272)
T ss_pred             ccEEEEeCCCcCcCCCCcCCHHHHHHHHHHHHCCCEEEEEC--CCCHHHHHHHHHHcCCC
Confidence            78999999999999765 55789999999999999999999  99998888889999886

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=99.54  E-value=5.6e-13  Score=111.03  Aligned_cols=56  Identities=34%  Similarity=0.449  Sum_probs=51.6

Q ss_pred             ecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          223 WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       223 ~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                      .+.||++.+++.+++++++++++.+||||++ +|+++|.++|+..+.+.+|......
T Consensus       102 ~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~-~Dlq~a~n~gi~~~~~~~~~~~~~~  157 (181)
T COG0241         102 DCRKPKPGMLLSALKEYNIDLSRSYVVGDRL-TDLQAAENAGIKGVLVLTGIGVTTD  157 (181)
T ss_pred             cccCCChHHHHHHHHHhCCCccceEEecCcH-HHHHHHHHCCCCceEEEcCcccccc
Confidence            3449999999999999999999999999997 9999999999999999999887654

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.53  E-value=7.1e-13  Score=119.23  Aligned_cols=58  Identities=21%  Similarity=0.174  Sum_probs=52.8

Q ss_pred             CccEEEEeccceeecCCccC-ccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           29 RFKAWLLDQFGVLHDGKKPY-PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~~~-~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      ++++|++|+||||+++.+.+ +.+.++|++|+++|++++++|  ||+...+...++++|++
T Consensus         6 ~~~lI~~DlDGTLL~~~~~i~~~~~~ai~~l~~~Gi~~viaT--GR~~~~i~~~~~~l~~~   64 (271)
T PRK03669          6 DPLLIFTDLDGTLLDSHTYDWQPAAPWLTRLREAQVPVILCS--SKTAAEMLPLQQTLGLQ   64 (271)
T ss_pred             CCeEEEEeCccCCcCCCCcCcHHHHHHHHHHHHcCCeEEEEc--CCCHHHHHHHHHHhCCC
Confidence            79999999999999987655 678999999999999999999  99999998899999985

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=99.53  E-value=2.3e-13  Score=121.87  Aligned_cols=60  Identities=28%  Similarity=0.371  Sum_probs=54.4

Q ss_pred             cCccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350           28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~   89 (313)
                      |.+++|+||+||||+++++ +.+.+.++|++++++|++++++|  ||+...+.+.++++|+..
T Consensus         1 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~~~~~g~~v~iaT--GR~~~~~~~~~~~l~~~~   61 (264)
T COG0561           1 MMIKLLAFDLDGTLLDSNKTISPETKEALARLREKGVKVVLAT--GRPLPDVLSILEELGLDG   61 (264)
T ss_pred             CCeeEEEEcCCCCccCCCCccCHHHHHHHHHHHHCCCEEEEEC--CCChHHHHHHHHHcCCCc
Confidence            5789999999999999876 45679999999999999999999  999999999999999973

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.52  E-value=1.1e-13  Score=110.00  Aligned_cols=130  Identities=34%  Similarity=0.440  Sum_probs=95.1

Q ss_pred             EEEEeccceeecCC---------ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHHH
Q 021350           32 AWLLDQFGVLHDGK---------KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELT  102 (313)
Q Consensus        32 ~iifDlDGTL~~~~---------~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~  102 (313)
                      +++||+||||+...         .+.+++.+++++|+++|+++.++||+.  ...+...++.+|+.... +.++.+....
T Consensus         1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~--~~~~~~~~~~~~~~~~~-~~i~~~~~~~   77 (139)
T cd01427           1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKGIKLALATNKS--RREVLELLEELGLDDYF-DPVITSNGAA   77 (139)
T ss_pred             CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHCCCeEEEEeCch--HHHHHHHHHHcCCchhh-hheeccchhh
Confidence            47999999999988         678999999999999999999999554  56666677777774222 1222111000


Q ss_pred             HHHHHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 021350          103 HQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICA  182 (313)
Q Consensus       103 ~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  182 (313)
                      ..                                     ..                                       
T Consensus        78 ~~-------------------------------------~~---------------------------------------   81 (139)
T cd01427          78 IY-------------------------------------YP---------------------------------------   81 (139)
T ss_pred             hh-------------------------------------cc---------------------------------------
Confidence            00                                     00                                       


Q ss_pred             hCCCcEEEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHH
Q 021350          183 SKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANA  262 (313)
Q Consensus       183 ~~g~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~  262 (313)
                                ...                   ...+......+||++..+..++++++.+++++++|||+. +|++++++
T Consensus        82 ----------~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~-~d~~~~~~  131 (139)
T cd01427          82 ----------KEG-------------------LFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSL-NDIEMAKA  131 (139)
T ss_pred             ----------ccc-------------------ccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCH-HHHHHHHH
Confidence                      000                   000223456679999999999999999999999999996 99999999


Q ss_pred             cCCcEEEE
Q 021350          263 AGIQSVFI  270 (313)
Q Consensus       263 aG~~~i~V  270 (313)
                      +|+++++|
T Consensus       132 ~g~~~i~v  139 (139)
T cd01427         132 AGGLGVAV  139 (139)
T ss_pred             cCCceeeC
Confidence            99999875

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>PRK10976 putative hydrolase; Provisional

Probab=99.51  E-value=2.6e-13  Score=121.55  Aligned_cols=57  Identities=21%  Similarity=0.223  Sum_probs=51.3

Q ss_pred             ccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           30 FKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        30 ~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      +|+|+||+||||+++.+ +.+.+.++|++++++|++++++|  ||+...+...++.+|++
T Consensus         2 ikli~~DlDGTLl~~~~~is~~~~~ai~~l~~~G~~~~iaT--GR~~~~~~~~~~~l~~~   59 (266)
T PRK10976          2 YQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGIHFVFAT--GRHHVDVGQIRDNLEIK   59 (266)
T ss_pred             ceEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEc--CCChHHHHHHHHhcCCC
Confidence            78999999999999765 55789999999999999999999  99988888888888886

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.49  E-value=5.6e-15  Score=122.76  Aligned_cols=96  Identities=26%  Similarity=0.427  Sum_probs=72.7

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++|+.++++|+++ ++||.+........   ..-.+...++. ++.......||+|..|..+++++|++|++|++
T Consensus        79 ~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l---~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~  155 (176)
T PF13419_consen   79 YPGVRELLERLKAKGIPLVIVSNGSRERIERVL---ERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEILF  155 (176)
T ss_dssp             STTHHHHHHHHHHTTSEEEEEESSEHHHHHHHH---HHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEEE
T ss_pred             hhhhhhhhhhcccccceeEEeecCCcccccccc---cccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEEE
Confidence            478899999999899999 78987543221111   00111122222 23345667899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEE
Q 021350          249 VGDSLHHDIKGANAAGIQSVFI  270 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V  270 (313)
                      |||+. .|+++|+++|+.+|+|
T Consensus       156 vgD~~-~d~~~A~~~G~~~i~v  176 (176)
T PF13419_consen  156 VGDSP-SDVEAAKEAGIKTIWV  176 (176)
T ss_dssp             EESSH-HHHHHHHHTTSEEEEE
T ss_pred             EeCCH-HHHHHHHHcCCeEEeC
Confidence            99997 9999999999999987

...

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.48  E-value=4.3e-14  Score=116.09  Aligned_cols=86  Identities=26%  Similarity=0.425  Sum_probs=64.0

Q ss_pred             HHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEE
Q 021350          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAV  249 (313)
Q Consensus       172 ~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~I  249 (313)
                      +++.+++..++++|+++ ++||..........   ... +...+.. .+..... +||+|+.|..+++++|+++ +|+||
T Consensus        67 ~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~---~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~i  140 (154)
T TIGR01549        67 RGAADLLKRLKEAGIKLGIISNGSLRAQKLLL---RKH-LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVLHV  140 (154)
T ss_pred             cCHHHHHHHHHHCcCeEEEEeCCchHHHHHHH---HHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEEEE
Confidence            67899999999999988 88987653322111   000 2223332 2334445 8999999999999999999 99999


Q ss_pred             cCCchhhHHHHHHcC
Q 021350          250 GDSLHHDIKGANAAG  264 (313)
Q Consensus       250 GDs~~~Di~~a~~aG  264 (313)
                      ||+. .|+++|+++|
T Consensus       141 GDs~-~Di~aa~~aG  154 (154)
T TIGR01549       141 GDNL-NDIEGARNAG  154 (154)
T ss_pred             eCCH-HHHHHHHHcc
Confidence            9995 9999999987

HAD subfamilies caused by an overly broad single model.

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.48  E-value=1.5e-13  Score=117.74  Aligned_cols=85  Identities=24%  Similarity=0.170  Sum_probs=61.4

Q ss_pred             HHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHh-cCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcC
Q 021350          174 LEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGD  251 (313)
Q Consensus       174 ~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGD  251 (313)
                      ..++|+.|+++|+++ ++||.........   +..-.+...++.. +.+.... ||+|..|..+++++|+++++|+||||
T Consensus       111 ~~~~L~~l~~~g~~~~i~T~~~~~~~~~~---l~~~gl~~~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~vGD  186 (197)
T TIGR01548       111 PKGLLRELHRAPKGMAVVTGRPRKDAAKF---LTTHGLEILFPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAMVGD  186 (197)
T ss_pred             HHHHHHHHHHcCCcEEEECCCCHHHHHHH---HHHcCchhhCCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEEEeC
Confidence            478888898899998 8898765322111   1111233334432 3333334 99999999999999999999999999


Q ss_pred             CchhhHHHHHHc
Q 021350          252 SLHHDIKGANAA  263 (313)
Q Consensus       252 s~~~Di~~a~~a  263 (313)
                      +. +|+++|+++
T Consensus       187 ~~-~Di~aA~~a  197 (197)
T TIGR01548       187 TV-DDIITGRKA  197 (197)
T ss_pred             CH-HHHHHHHhC
Confidence            97 999999975

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=99.47  E-value=1.1e-12  Score=121.16  Aligned_cols=51  Identities=22%  Similarity=0.277  Sum_probs=46.8

Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       224 ~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      .+||+|.++..++++++++|++++||||+. +|+++|+++|+++|+|.....
T Consensus       102 ~rKP~p~~l~~a~~~l~v~~~~svmIGDs~-sDi~aAk~aGi~~I~v~~~~~  152 (354)
T PRK05446        102 CRKPKTGLVEEYLAEGAIDLANSYVIGDRE-TDVQLAENMGIKGIRYARETL  152 (354)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccEEEEcCCH-HHHHHHHHCCCeEEEEECCCC
Confidence            459999999999999999999999999996 999999999999999966433

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.47  E-value=3.8e-13  Score=112.37  Aligned_cols=52  Identities=12%  Similarity=0.203  Sum_probs=46.6

Q ss_pred             CCCHHHHHHHHHHh--CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          226 KPDKIIYKSAMAMV--GVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       226 KP~~~~~~~~~~~l--gv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      ||.+.+++.+.+++  |++|++|+||||+. .|+.+|+++|+.+++|.+|....+
T Consensus       111 kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~-~di~aA~~aGi~~i~v~~g~~~~~  164 (174)
T TIGR01685       111 KQLEMILQKVNKVDPSVLKPAQILFFDDRT-DNVREVWGYGVTSCYCPSGMDKGT  164 (174)
T ss_pred             HHHHHHHHHhhhcccCCCCHHHeEEEcChh-HhHHHHHHhCCEEEEcCCCccHHH
Confidence            78888888888888  89999999999996 999999999999999999876544

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=99.46  E-value=1.3e-12  Score=113.38  Aligned_cols=57  Identities=14%  Similarity=0.158  Sum_probs=49.9

Q ss_pred             ccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           30 FKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        30 ~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      +|+|+||+||||++... +.+.+.++|++|++.|++++++|  +|+...+...++.+++.
T Consensus         1 ik~v~~DlDGTLl~~~~~i~~~~~~~i~~l~~~g~~~~~~T--GR~~~~~~~~~~~l~~~   58 (215)
T TIGR01487         1 IKLVAIDIDGTLTEPNRMISERAIEAIRKAEKKGIPVSLVT--GNTVPFARALAVLIGTS   58 (215)
T ss_pred             CcEEEEecCCCcCCCCcccCHHHHHHHHHHHHCCCEEEEEc--CCcchhHHHHHHHhCCC
Confidence            57999999999998765 55789999999999999999999  88888887778888876

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.46  E-value=2.4e-12  Score=115.92  Aligned_cols=59  Identities=24%  Similarity=0.214  Sum_probs=52.3

Q ss_pred             cCccEEEEeccceeec-CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           28 RRFKAWLLDQFGVLHD-GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~-~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      |.+|+|++|+||||++ .....+.+.++|++|+++|++++++|  +|+...+...++++|+.
T Consensus         2 ~~~kli~~DlDGTLl~~~~~~~~~~~~ai~~l~~~Gi~~~iaT--gR~~~~~~~~~~~l~l~   61 (273)
T PRK00192          2 MMKLLVFTDLDGTLLDHHTYSYEPAKPALKALKEKGIPVIPCT--SKTAAEVEVLRKELGLE   61 (273)
T ss_pred             CcceEEEEcCcccCcCCCCcCcHHHHHHHHHHHHCCCEEEEEc--CCCHHHHHHHHHHcCCC
Confidence            4589999999999999 45677889999999999999999999  77788888888989986

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=99.45  E-value=3.2e-13  Score=117.67  Aligned_cols=55  Identities=24%  Similarity=0.252  Sum_probs=48.3

Q ss_pred             EEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           32 AWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        32 ~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      .|++|+||||+++.+ .++.+.++|++++++|++++++|  +|+...+...++.+|+.
T Consensus         1 ~i~~DlDGTLL~~~~~~~~~~~~~l~~l~~~gi~~~i~T--gR~~~~~~~~~~~l~~~   56 (221)
T TIGR02463         1 WVFSDLDGTLLDSHSYDWQPAAPWLTRLQEAGIPVILCT--SKTAAEVEYLQKALGLT   56 (221)
T ss_pred             CEEEeCCCCCcCCCCCCcHHHHHHHHHHHHCCCeEEEEc--CCCHHHHHHHHHHcCCC
Confidence            489999999999776 56678999999999999999999  88888888888888875

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=99.44  E-value=7e-13  Score=120.91  Aligned_cols=48  Identities=15%  Similarity=0.090  Sum_probs=45.4

Q ss_pred             CCCHHHHHHHHHHhCC-CCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350          226 KPDKIIYKSAMAMVGV-DACDSIAVGDSLHHDIKGANAAGIQSVFIIGGI  274 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv-~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~  274 (313)
                      ||+|..++.++++++. ++++|+||||+. +|+++|+++|+++++|.+|-
T Consensus       251 kp~p~~~~~~l~~~~~~~~~~~~~vgD~~-~d~~~a~~~Gi~~i~v~~g~  299 (300)
T PHA02530        251 RPDDVVKEEIFWEKIAPKYDVLLAVDDRD-QVVDMWRRIGLECWQVAPGD  299 (300)
T ss_pred             CCcHHHHHHHHHHHhccCceEEEEEcCcH-HHHHHHHHhCCeEEEecCCC
Confidence            9999999999999998 689999999996 99999999999999999873

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.43  E-value=9.9e-13  Score=114.26  Aligned_cols=104  Identities=13%  Similarity=0.123  Sum_probs=76.4

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      .|+++.++|+.++++|+++ ++||...............+.+...+...- .....+||+|+.|..+++++|++|++|++
T Consensus        96 lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~f-d~~~g~KP~p~~y~~i~~~lgv~p~e~lf  174 (220)
T TIGR01691        96 LYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYF-DTTVGLKTEAQSYVKIAGQLGSPPREILF  174 (220)
T ss_pred             cCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEE-EeCcccCCCHHHHHHHHHHhCcChhHEEE
Confidence            4789999999999999998 889976532211100111122333333211 11234699999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      |||+. .|+++|+++|+.++++.++..
T Consensus       175 VgDs~-~Di~AA~~AG~~ti~v~r~g~  200 (220)
T TIGR01691       175 LSDII-NELDAARKAGLHTGQLVRPGN  200 (220)
T ss_pred             EeCCH-HHHHHHHHcCCEEEEEECCCC
Confidence            99995 999999999999999988653

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=99.43  E-value=4.2e-12  Score=113.17  Aligned_cols=55  Identities=27%  Similarity=0.380  Sum_probs=48.4

Q ss_pred             EEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           32 AWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        32 ~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      +|+||+||||++... +.+.+.++|++++++|+.++++|  +|+...+...++++|+.
T Consensus         1 li~~DlDGTLl~~~~~i~~~~~~~i~~l~~~G~~~~iaT--GR~~~~~~~~~~~~~~~   56 (256)
T TIGR00099         1 LIFIDLDGTLLNDDHTISPSTKEALAKLREKGIKVVLAT--GRPYKEVKNILKELGLD   56 (256)
T ss_pred             CEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCeEEEEe--CCCHHHHHHHHHHcCCC
Confidence            479999999999765 55789999999999999999999  88888888888888876

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=99.42  E-value=1e-12  Score=115.00  Aligned_cols=55  Identities=24%  Similarity=0.170  Sum_probs=49.9

Q ss_pred             EEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           32 AWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        32 ~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      +|+||+||||+++...++.+.++|++++++|++++++|  +|+..++...++++|+.
T Consensus         1 li~~DlDGTLl~~~~~~~~~~~ai~~l~~~G~~~vi~T--gR~~~~~~~~~~~lg~~   55 (225)
T TIGR02461         1 VIFTDLDGTLLPPGYEPGPAREALEELKDLGFPIVFVS--SKTRAEQEYYREELGVE   55 (225)
T ss_pred             CEEEeCCCCCcCCCCCchHHHHHHHHHHHCCCEEEEEe--CCCHHHHHHHHHHcCCC
Confidence            48999999999977778889999999999999999998  88888888889999985

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=99.40  E-value=1.3e-12  Score=113.91  Aligned_cols=54  Identities=17%  Similarity=0.214  Sum_probs=47.0

Q ss_pred             EEEeccceeecCCcc-CccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           33 WLLDQFGVLHDGKKP-YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        33 iifDlDGTL~~~~~~-~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      |+||+||||+++... .+.+.++|+++++.|++++++|  ||+...+...++.+|++
T Consensus         1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~Gi~~~~aT--GR~~~~~~~~~~~l~~~   55 (225)
T TIGR01482         1 IASDIDGTLTDPNRAINESALEAIRKAESVGIPVVLVT--GNSVQFARALAKLIGTP   55 (225)
T ss_pred             CeEeccCccCCCCcccCHHHHHHHHHHHHCCCEEEEEc--CCchHHHHHHHHHhCCC
Confidence            589999999998764 4678899999999999999999  88888888888888864

catalyze the same reaction as SPP.

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=99.40  E-value=5.2e-12  Score=111.11  Aligned_cols=177  Identities=26%  Similarity=0.303  Sum_probs=116.9

Q ss_pred             EEEeccceeecCC-ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHHHHHHHHhcCc
Q 021350           33 WLLDQFGVLHDGK-KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDD  111 (313)
Q Consensus        33 iifDlDGTL~~~~-~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l~~~~~  111 (313)
                      |+||+||||+++. ++.+.+.++|++|+++|++++++|  ||+...+.+.+..+++.    ..+++.+            
T Consensus         1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~g~~~~i~T--GR~~~~~~~~~~~~~~~----~~~I~~n------------   62 (254)
T PF08282_consen    1 IFSDLDGTLLNSDGKISPETIEALKELQEKGIKLVIAT--GRSYSSIKRLLKELGID----DYFICSN------------   62 (254)
T ss_dssp             EEEECCTTTCSTTSSSCHHHHHHHHHHHHTTCEEEEEC--SSTHHHHHHHHHHTTHC----SEEEEGG------------
T ss_pred             cEEEECCceecCCCeeCHHHHHHHHhhcccceEEEEEc--cCcccccccccccccch----hhhcccc------------
Confidence            6899999999865 445789999999999999999999  99999999999988887    2344444            


Q ss_pred             hhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCcEEEE
Q 021350          112 AWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVA  191 (313)
Q Consensus       112 ~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~i~t  191 (313)
                            |..++ .                     .+...+..             ..++.+.+.+++..+.+++..+.+.
T Consensus        63 ------Ga~i~-~---------------------~~~~~l~~-------------~~i~~~~~~~i~~~~~~~~~~~~~~  101 (254)
T PF08282_consen   63 ------GALID-D---------------------PKGKILYE-------------KPIDSDDVKKILKYLKEHNISFFFY  101 (254)
T ss_dssp             ------GTEEE-E---------------------TTTEEEEE-------------ESB-HHHHHHHHHHHHHTTCEEEEE
T ss_pred             ------cceee-e---------------------cccccchh-------------hheeccchhheeehhhhcccccccc
Confidence                  33220 0                     11111111             3466788888888888888777444


Q ss_pred             cCCccccccc---h------h------------------------ccCCchHHHH---HH-HhcCc--------------
Q 021350          192 NPDYVTVEAR---A------L------------------------RVMPGTLASK---FE-KLGGE--------------  220 (313)
Q Consensus       192 n~d~~~~~~~---~------~------------------------~~~~g~~~~~---~~-~~~~~--------------  220 (313)
                      .++..+....   .      .                        ......+..+   +. .....              
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~lei~  181 (254)
T PF08282_consen  102 TDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRSSPYFLEIT  181 (254)
T ss_dssp             ESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEEETTEEEEE
T ss_pred             cceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEecccceEEe
Confidence            3333322222   0      0                        0011122222   11 12211              


Q ss_pred             eeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350          221 VRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIG  272 (313)
Q Consensus       221 ~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~  272 (313)
                      +..+.|-.  +++.+++.+|++++++++|||+. ||+.|.+.+| .++.+..
T Consensus       182 ~~~vsK~~--ai~~l~~~~~i~~~~~~~~GD~~-ND~~Ml~~~~-~~~am~n  229 (254)
T PF08282_consen  182 PKGVSKGS--AIKYLLEYLGISPEDIIAFGDSE-NDIEMLELAG-YSVAMGN  229 (254)
T ss_dssp             ETTSSHHH--HHHHHHHHHTTSGGGEEEEESSG-GGHHHHHHSS-EEEEETT
T ss_pred             eCCCCHHH--HHHHHhhhcccccceeEEeeccc-ccHhHHhhcC-eEEEEcC
Confidence            23355655  89999999999999999999995 9999999999 4455554

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PLN02887 hydrolase family protein

Probab=99.40  E-value=3.8e-12  Score=124.62  Aligned_cols=59  Identities=22%  Similarity=0.298  Sum_probs=52.8

Q ss_pred             cCccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      +++|+|+||+||||+++.+ +.+.+.++|++++++|+.++++|  ||+...+...++++|+.
T Consensus       306 ~~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl~ekGi~~vIAT--GR~~~~i~~~l~~L~l~  365 (580)
T PLN02887        306 PKFSYIFCDMDGTLLNSKSQISETNAKALKEALSRGVKVVIAT--GKARPAVIDILKMVDLA  365 (580)
T ss_pred             cCccEEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCeEEEEc--CCCHHHHHHHHHHhCcc
Confidence            3799999999999999765 55789999999999999999999  99988888888888875

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=99.38  E-value=3.6e-12  Score=104.94  Aligned_cols=47  Identities=15%  Similarity=0.239  Sum_probs=42.0

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGI  274 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~  274 (313)
                      ||+|..+..+++++|+++++|+||||+. +|+.+++++|+. +.|..+.
T Consensus        75 ~~k~~~~~~~~~~~~~~~~~~~~vGDs~-~D~~~~~~ag~~-~~v~~~~  121 (154)
T TIGR01670        75 SNKLIAFSDILEKLALAPENVAYIGDDL-IDWPVMEKVGLS-VAVADAH  121 (154)
T ss_pred             cchHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHCCCe-EecCCcC
Confidence            5677899999999999999999999996 999999999986 7776653

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.37  E-value=5.2e-12  Score=109.80  Aligned_cols=94  Identities=16%  Similarity=0.145  Sum_probs=64.1

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-h---c-------CceeecCCCCHHHHHHHHHH
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-L---G-------GEVRWMGKPDKIIYKSAMAM  238 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~---~-------~~~~~~gKP~~~~~~~~~~~  238 (313)
                      ++++.+.++.++++|.++ ++||............++.   ...+.. +   +       ......++|+|.+|+.++++
T Consensus        87 ~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i---~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~  163 (219)
T TIGR00338        87 TEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGL---DAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRK  163 (219)
T ss_pred             CCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCC---CceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHHH
Confidence            578899999999999988 7888653222111000110   011100 0   0       01112356789999999999


Q ss_pred             hCCCCCcEEEEcCCchhhHHHHHHcCCcEE
Q 021350          239 VGVDACDSIAVGDSLHHDIKGANAAGIQSV  268 (313)
Q Consensus       239 lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i  268 (313)
                      +++++++|++|||+. +|+.+|+++|+..+
T Consensus       164 ~~~~~~~~i~iGDs~-~Di~aa~~ag~~i~  192 (219)
T TIGR00338       164 EGISPENTVAVGDGA-NDLSMIKAAGLGIA  192 (219)
T ss_pred             cCCCHHHEEEEECCH-HHHHHHHhCCCeEE
Confidence            999999999999996 99999999999753

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.37  E-value=3.6e-13  Score=112.91  Aligned_cols=83  Identities=18%  Similarity=0.240  Sum_probs=60.3

Q ss_pred             HHHHHHHHHHHHhCCCcEEEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEE
Q 021350          171 LQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAV  249 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~I  249 (313)
                      ++++.++|+.      ..++||.........   +....+...++. ++.+....+||+|++|+.+++++|++|++|+||
T Consensus        92 ~~g~~~~L~~------~~i~Tn~~~~~~~~~---l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~v  162 (175)
T TIGR01493        92 WPDSAAALAR------VAILSNASHWAFDQF---AQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMV  162 (175)
T ss_pred             CCchHHHHHH------HhhhhCCCHHHHHHH---HHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeE
Confidence            4667777652      227888766433322   111234555655 355566788999999999999999999999999


Q ss_pred             cCCchhhHHHHHHc
Q 021350          250 GDSLHHDIKGANAA  263 (313)
Q Consensus       250 GDs~~~Di~~a~~a  263 (313)
                      ||+. .|+.+|+++
T Consensus       163 gD~~-~Di~~A~~~  175 (175)
T TIGR01493       163 AAHQ-WDLIGARKF  175 (175)
T ss_pred             ecCh-hhHHHHhcC
Confidence            9996 999999874

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=99.37  E-value=1.1e-11  Score=110.58  Aligned_cols=55  Identities=25%  Similarity=0.242  Sum_probs=50.4

Q ss_pred             EEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           32 AWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        32 ~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      .|+||+||||+++.+ .++.+.+++++|+++|++++++|  +|+...+...++++|++
T Consensus         1 li~~DlDGTll~~~~~~~~~~~~~i~~l~~~g~~~~~~T--gR~~~~~~~~~~~~~~~   56 (256)
T TIGR01486         1 WIFTDLDGTLLDPHGYDWGPAKEVLERLQELGIPVIPCT--SKTAAEVEYLRKELGLE   56 (256)
T ss_pred             CEEEcCCCCCcCCCCcCchHHHHHHHHHHHCCCeEEEEc--CCCHHHHHHHHHHcCCC
Confidence            479999999999887 77789999999999999999999  99999999999999986

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.37  E-value=2.4e-12  Score=112.86  Aligned_cols=103  Identities=14%  Similarity=0.111  Sum_probs=67.7

Q ss_pred             CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchh-ccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCc
Q 021350          169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARAL-RVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACD  245 (313)
Q Consensus       169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~-~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~  245 (313)
                      +.++.+.++++.++++|.++ ++||....-...... .+..-.+...+.. ++.+.....||++.   .+++++++    
T Consensus       114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~---~~l~~~~i----  186 (237)
T TIGR01672       114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT---QWIQDKNI----  186 (237)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHH---HHHHhCCC----
Confidence            45577999999999999998 889864310100000 0000011122222 23334444678765   35566766    


Q ss_pred             EEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          246 SIAVGDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       246 ~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                      ++||||+. +||.+|+++|++++.|++|..+...
T Consensus       187 ~i~vGDs~-~DI~aAk~AGi~~I~V~~g~~s~~~  219 (237)
T TIGR01672       187 RIHYGDSD-NDITAAKEAGARGIRILRASNSTYK  219 (237)
T ss_pred             eEEEeCCH-HHHHHHHHCCCCEEEEEecCCCCCC
Confidence            79999996 9999999999999999999887763

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>PLN02954 phosphoserine phosphatase

Probab=99.36  E-value=6e-12  Score=109.77  Aligned_cols=100  Identities=11%  Similarity=0.048  Sum_probs=63.3

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHH---------H-hcC---ceeecCCCCHHHHHHHH
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFE---------K-LGG---EVRWMGKPDKIIYKSAM  236 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~---------~-~~~---~~~~~gKP~~~~~~~~~  236 (313)
                      ++++.++++.++++|.++ ++|++...........++... ...+.         . .+.   .+...++|+|..++.++
T Consensus        86 ~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~-~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~~  164 (224)
T PLN02954         86 SPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPP-ENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHIK  164 (224)
T ss_pred             CccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCCh-hhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHHH
Confidence            578999999999999988 788765432211100010000 00110         0 000   11124567788999999


Q ss_pred             HHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          237 AMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       237 ~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      ++++.  ++|+||||+. +|+.+|+++|+..+.. +|.+
T Consensus       165 ~~~~~--~~~i~iGDs~-~Di~aa~~~~~~~~~~-~~~~  199 (224)
T PLN02954        165 KKHGY--KTMVMIGDGA-TDLEARKPGGADLFIG-YGGV  199 (224)
T ss_pred             HHcCC--CceEEEeCCH-HHHHhhhcCCCCEEEe-cCCC
Confidence            98875  7999999996 9999999988876654 5433

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=99.36  E-value=3.9e-12  Score=106.01  Aligned_cols=44  Identities=18%  Similarity=0.264  Sum_probs=39.9

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEE
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFI  270 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V  270 (313)
                      ||+|+.++.+++++++++++|++|||+. +|+.+++++|+..+--
T Consensus        81 kpkp~~~~~~~~~l~~~~~ev~~iGD~~-nDi~~~~~ag~~~am~  124 (169)
T TIGR02726        81 KKKTEPYAQMLEEMNISDAEVCYVGDDL-VDLSMMKRVGLAVAVG  124 (169)
T ss_pred             CCCHHHHHHHHHHcCcCHHHEEEECCCH-HHHHHHHHCCCeEECc
Confidence            7888999999999999999999999996 9999999999665543

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=99.35  E-value=4.7e-12  Score=107.29  Aligned_cols=44  Identities=14%  Similarity=0.231  Sum_probs=38.2

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEc
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFII  271 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~  271 (313)
                      ++.+..++.+++++|+++++|+||||+. +|+.+++++|+.. .|.
T Consensus        95 ~~k~~~l~~~~~~~gl~~~ev~~VGDs~-~D~~~a~~aG~~~-~v~  138 (183)
T PRK09484         95 SNKLIAFSDLLEKLAIAPEQVAYIGDDL-IDWPVMEKVGLSV-AVA  138 (183)
T ss_pred             CcHHHHHHHHHHHhCCCHHHEEEECCCH-HHHHHHHHCCCeE-ecC
Confidence            3445689999999999999999999996 9999999999984 453

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=99.35  E-value=8.1e-12  Score=103.15  Aligned_cols=48  Identities=19%  Similarity=0.445  Sum_probs=41.3

Q ss_pred             CCCHHHHHHHHHHhCC-----CCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          226 KPDKIIYKSAMAMVGV-----DACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv-----~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      ||.  .+..+++.++.     +|++++||||++-|||.+|+.+|+-+|||+.|..
T Consensus       116 KP~--~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv~  168 (168)
T PF09419_consen  116 KPG--CFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGVT  168 (168)
T ss_pred             CCc--cHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCcC
Confidence            773  67777776653     5999999999999999999999999999999863

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=99.32  E-value=6.2e-11  Score=105.31  Aligned_cols=56  Identities=16%  Similarity=0.056  Sum_probs=48.2

Q ss_pred             EEEEeccceeec---CC-ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350           32 AWLLDQFGVLHD---GK-KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (313)
Q Consensus        32 ~iifDlDGTL~~---~~-~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~   89 (313)
                      +|+.|+||||++   ++ +..|...+.+++++++|+.++++|  ||+..++.+.++++++..
T Consensus         3 li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aT--GR~~~~~~~~~~~~~~~~   62 (249)
T TIGR01485         3 LLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYST--GRSPHSYKELQKQKPLLT   62 (249)
T ss_pred             EEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEc--CCCHHHHHHHHhcCCCCC
Confidence            688999999996   44 456788999999999999999999  999999998888888764

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=99.32  E-value=6e-12  Score=100.33  Aligned_cols=41  Identities=20%  Similarity=0.214  Sum_probs=36.7

Q ss_pred             cEEEEeccceeecCC-------------ccCccHHHHHHHHHHCCCcEEEEeCC
Q 021350           31 KAWLLDQFGVLHDGK-------------KPYPGAISTLEMLATTGAKMVVISNS   71 (313)
Q Consensus        31 k~iifDlDGTL~~~~-------------~~~~~a~~~l~~l~~~g~~~~~~Tn~   71 (313)
                      |+++||+|||||++.             +++|++.+.|+.|+++|+++.++||+
T Consensus         1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~   54 (128)
T TIGR01681         1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYN   54 (128)
T ss_pred             CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCC
Confidence            589999999999983             15789999999999999999999976

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=99.28  E-value=4.9e-11  Score=105.05  Aligned_cols=54  Identities=9%  Similarity=0.099  Sum_probs=46.2

Q ss_pred             EEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           32 AWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        32 ~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      +|++|+||||+++.+.++...++++ ++++|+.++++|  ||+..++.+.+..+++.
T Consensus         1 li~~DlDgTLl~~~~~~~~~~~~~~-~~~~gi~~viaT--GR~~~~v~~~~~~l~l~   54 (236)
T TIGR02471         1 LIITDLDNTLLGDDEGLASFVELLR-GSGDAVGFGIAT--GRSVESAKSRYAKLNLP   54 (236)
T ss_pred             CeEEeccccccCCHHHHHHHHHHHH-hcCCCceEEEEe--CCCHHHHHHHHHhCCCC
Confidence            4789999999997766666556665 688999999999  99999999999999885

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.25  E-value=4.2e-11  Score=109.86  Aligned_cols=98  Identities=11%  Similarity=0.110  Sum_probs=67.4

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCch-HHHHHHHhcC-------ceeecCCCCHHHHHHHHHHhCC
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGT-LASKFEKLGG-------EVRWMGKPDKIIYKSAMAMVGV  241 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~-~~~~~~~~~~-------~~~~~gKP~~~~~~~~~~~lgv  241 (313)
                      ++++++.++.|++.|+++ ++|++...+...-...++... +.+.++...+       .....+||++..++.+++++|+
T Consensus       183 ~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~lgi  262 (322)
T PRK11133        183 MPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQEYEI  262 (322)
T ss_pred             ChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHHcCC
Confidence            588999999999999998 888865433211110111100 0001110000       0223568999999999999999


Q ss_pred             CCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 021350          242 DACDSIAVGDSLHHDIKGANAAGIQSVF  269 (313)
Q Consensus       242 ~~~~~v~IGDs~~~Di~~a~~aG~~~i~  269 (313)
                      ++++|++|||+. +|+.|+++||+..++
T Consensus       263 ~~~qtIaVGDg~-NDl~m~~~AGlgiA~  289 (322)
T PRK11133        263 PLAQTVAIGDGA-NDLPMIKAAGLGIAY  289 (322)
T ss_pred             ChhhEEEEECCH-HHHHHHHHCCCeEEe
Confidence            999999999997 999999999986665

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.22  E-value=6.7e-11  Score=101.14  Aligned_cols=103  Identities=15%  Similarity=0.080  Sum_probs=63.7

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchH-HHHHHH--hc---Ccee--ecCCCCHHHHHHHHHHhCC
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTL-ASKFEK--LG---GEVR--WMGKPDKIIYKSAMAMVGV  241 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~-~~~~~~--~~---~~~~--~~gKP~~~~~~~~~~~lgv  241 (313)
                      ++++.+.+..|+++|+++ ++||....+.......++...+ ...+..  .+   ..+.  ...++++..+..+++++|+
T Consensus        82 ~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~~~~~  161 (201)
T TIGR01491        82 RDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKRELNP  161 (201)
T ss_pred             CccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHHHhCC
Confidence            578999999999999998 7888654222111000100000 000000  00   0000  0112333588899999999


Q ss_pred             CCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350          242 DACDSIAVGDSLHHDIKGANAAGIQSVFIIGGI  274 (313)
Q Consensus       242 ~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~  274 (313)
                      ++++|+||||+. +|+.+|+++|+..+....+.
T Consensus       162 ~~~~~i~iGDs~-~D~~~a~~ag~~~a~~~~~~  193 (201)
T TIGR01491       162 SLTETVAVGDSK-NDLPMFEVADISISLGDEGH  193 (201)
T ss_pred             CHHHEEEEcCCH-hHHHHHHhcCCeEEECCCcc
Confidence            999999999996 99999999999776655544

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>PTZ00174 phosphomannomutase; Provisional

Probab=99.20  E-value=1.5e-10  Score=102.73  Aligned_cols=55  Identities=20%  Similarity=0.199  Sum_probs=47.8

Q ss_pred             cCccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHh
Q 021350           28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKS   84 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~   84 (313)
                      |++|+|+||+||||+++.+ +.+.+.++|++++++|+.++++|  ||+...+.+.+..
T Consensus         3 ~~~klia~DlDGTLL~~~~~is~~~~~ai~~l~~~Gi~~viaT--GR~~~~i~~~l~~   58 (247)
T PTZ00174          3 MKKTILLFDVDGTLTKPRNPITQEMKDTLAKLKSKGFKIGVVG--GSDYPKIKEQLGE   58 (247)
T ss_pred             CCCeEEEEECcCCCcCCCCCCCHHHHHHHHHHHHCCCEEEEEc--CCCHHHHHHHHhh
Confidence            6799999999999999875 56788999999999999999999  8888777666653

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=99.19  E-value=5.7e-11  Score=99.99  Aligned_cols=98  Identities=19%  Similarity=0.244  Sum_probs=75.7

Q ss_pred             HHHHHHHHHHHhCCCcEEEEcCCccccccchhccCCchHHHHHHHh---c-C---ceeecCCCCHHHHHHHHHHhCCC-C
Q 021350          172 QDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKL---G-G---EVRWMGKPDKIIYKSAMAMVGVD-A  243 (313)
Q Consensus       172 ~~~~~~l~~l~~~g~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~~---~-~---~~~~~gKP~~~~~~~~~~~lgv~-~  243 (313)
                      +.++..|..+++++ ++++||.+.+....-   +.--++...|+.+   + .   +..++-||++.+|+.+++..|++ |
T Consensus       103 ~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~---Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~p  178 (244)
T KOG3109|consen  103 PVLRNLLLSLKKRR-KWIFTNAYKVHAIRI---LKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDSP  178 (244)
T ss_pred             HHHHHHHHhCcccc-EEEecCCcHHHHHHH---HHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCCc
Confidence            57888887776555 779999887654332   2223445555542   1 1   35688999999999999999998 9


Q ss_pred             CcEEEEcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350          244 CDSIAVGDSLHHDIKGANAAGIQSVFIIGGI  274 (313)
Q Consensus       244 ~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~  274 (313)
                      .++++|.||. +.|..|++.|+.+++|+..-
T Consensus       179 ~~t~FfDDS~-~NI~~ak~vGl~tvlv~~~~  208 (244)
T KOG3109|consen  179 RNTYFFDDSE-RNIQTAKEVGLKTVLVGREH  208 (244)
T ss_pred             CceEEEcCch-hhHHHHHhccceeEEEEeee
Confidence            9999999995 99999999999999998843

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=99.18  E-value=4.9e-10  Score=98.24  Aligned_cols=45  Identities=27%  Similarity=0.290  Sum_probs=37.0

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      ||++..   .++++++    ++||||+. +|+++|++||+.+|.|.+|..+..
T Consensus       174 K~~K~~---~l~~~~i----~I~IGDs~-~Di~aA~~AGi~~I~v~~G~~~~~  218 (237)
T PRK11009        174 QYTKTQ---WLKKKNI----RIFYGDSD-NDITAAREAGARGIRILRAANSTY  218 (237)
T ss_pred             CCCHHH---HHHhcCC----eEEEcCCH-HHHHHHHHcCCcEEEEecCCCCCC
Confidence            666543   4455665    99999996 999999999999999999987654

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=99.15  E-value=1.9e-09  Score=105.97  Aligned_cols=60  Identities=20%  Similarity=0.180  Sum_probs=52.6

Q ss_pred             hcCccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           27 TRRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        27 ~~~~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      +|..|+|++|+||||++... ..+.+.++|++++++|++++++|  ||+...+...++++|+.
T Consensus       413 ~~~~KLIfsDLDGTLLd~d~~i~~~t~eAL~~L~ekGI~~VIAT--GRs~~~i~~l~~~Lgl~  473 (694)
T PRK14502        413 GQFKKIVYTDLDGTLLNPLTYSYSTALDALRLLKDKELPLVFCS--AKTMGEQDLYRNELGIK  473 (694)
T ss_pred             CceeeEEEEECcCCCcCCCCccCHHHHHHHHHHHHcCCeEEEEe--CCCHHHHHHHHHHcCCC
Confidence            46789999999999999654 55788999999999999999999  98888888888888875

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=99.15  E-value=4.6e-10  Score=108.71  Aligned_cols=44  Identities=23%  Similarity=0.289  Sum_probs=38.8

Q ss_pred             CccEEEEeccceeecCC------------c-cCccHHHHHHHHHHCCCcEEEEeCCC
Q 021350           29 RFKAWLLDQFGVLHDGK------------K-PYPGAISTLEMLATTGAKMVVISNSS   72 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~------------~-~~~~a~~~l~~l~~~g~~~~~~Tn~~   72 (313)
                      +-|+++||+||||+...            + ++|++.+.|+.|++.|++++++||.+
T Consensus       167 ~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~  223 (526)
T TIGR01663       167 QEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQG  223 (526)
T ss_pred             cCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCc
Confidence            67899999999999732            1 47999999999999999999999976

Note that the EC number for the kinase function is: 2.7.1.78

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=99.14  E-value=1.4e-09  Score=93.50  Aligned_cols=53  Identities=30%  Similarity=0.416  Sum_probs=44.4

Q ss_pred             EEEEeccceeecCC--ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCC
Q 021350           32 AWLLDQFGVLHDGK--KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLG   86 (313)
Q Consensus        32 ~iifDlDGTL~~~~--~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G   86 (313)
                      .++||+||||++..  ++.+.+.++|++|++.|++++++|  ||....+.+.++.++
T Consensus         1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T--GR~~~~~~~~~~~~~   55 (204)
T TIGR01484         1 LLFFDLDGTLLDPNAHELSPETIEALERLREAGVKVVLVT--GRSLAEIKELLKQLP   55 (204)
T ss_pred             CEEEeCcCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEEC--CCCHHHHHHHHHhCC
Confidence            47899999999864  456789999999999999999999  888887777777643

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.12  E-value=2.3e-10  Score=99.67  Aligned_cols=97  Identities=16%  Similarity=0.136  Sum_probs=64.4

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhc-cCCchHHHHHHHhcCceeecCCCCHHH----------HHHHHH
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALR-VMPGTLASKFEKLGGEVRWMGKPDKII----------YKSAMA  237 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~gKP~~~~----------~~~~~~  237 (313)
                      .++++.+.++.++++|+++ |+|++...+...-... +....+...-..+.++....+||+|..          ...+++
T Consensus        75 l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~l~  154 (219)
T PRK09552         75 IREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGLIPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSLIR  154 (219)
T ss_pred             cCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHhCCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHHHH
Confidence            3579999999999999998 8888655332211100 111000000000233445677888764          357888


Q ss_pred             HhCCCCCcEEEEcCCchhhHHHHHHcCCcE
Q 021350          238 MVGVDACDSIAVGDSLHHDIKGANAAGIQS  267 (313)
Q Consensus       238 ~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~  267 (313)
                      +++.++++|+||||+. +|+.+|++||+..
T Consensus       155 ~~~~~~~~~i~iGDs~-~Di~aa~~Ag~~~  183 (219)
T PRK09552        155 KLSDTNDFHIVIGDSI-TDLEAAKQADKVF  183 (219)
T ss_pred             HhccCCCCEEEEeCCH-HHHHHHHHCCcce
Confidence            9999999999999996 9999999999833

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.10  E-value=5.2e-09  Score=93.41  Aligned_cols=57  Identities=21%  Similarity=0.191  Sum_probs=51.1

Q ss_pred             ccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           30 FKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        30 ~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      +|.|++||||||++.+. ..+.+.++|++|+++|++++++|  +|+..++...++++|+.
T Consensus         1 ~KLIftDLDGTLLd~~~~~~~~a~~aL~~Lk~~GI~vVlaT--GRt~~ev~~l~~~Lgl~   58 (302)
T PRK12702          1 MRLVLSSLDGSLLDLEFNSYGAARQALAALERRSIPLVLYS--LRTRAQLEHLCRQLRLE   58 (302)
T ss_pred             CcEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEc--CCCHHHHHHHHHHhCCC
Confidence            47999999999999665 56789999999999999999999  98888998888999986

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=99.05  E-value=1.1e-09  Score=90.57  Aligned_cols=43  Identities=30%  Similarity=0.361  Sum_probs=33.7

Q ss_pred             CCCCHHHHHHHHHHhC----CCCCcEEEEcCC----------chhhHHHHHHcCCcE
Q 021350          225 GKPDKIIYKSAMAMVG----VDACDSIAVGDS----------LHHDIKGANAAGIQS  267 (313)
Q Consensus       225 gKP~~~~~~~~~~~lg----v~~~~~v~IGDs----------~~~Di~~a~~aG~~~  267 (313)
                      .||.+.+++.+++.++    ++.++++||||+          ..+|...|.++|++.
T Consensus        96 RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f  152 (159)
T PF08645_consen   96 RKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKF  152 (159)
T ss_dssp             STTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--E
T ss_pred             CCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCcc
Confidence            3999999999999886    599999999995          138999999999874

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=99.03  E-value=1.3e-08  Score=91.38  Aligned_cols=55  Identities=25%  Similarity=0.308  Sum_probs=46.1

Q ss_pred             cEEEEeccceeecC------CccCccHHHHHHHHHH-CCCcEEEEeCCCCCchHHHHHHHhCCC
Q 021350           31 KAWLLDQFGVLHDG------KKPYPGAISTLEMLAT-TGAKMVVISNSSRRASTTIDKLKSLGF   87 (313)
Q Consensus        31 k~iifDlDGTL~~~------~~~~~~a~~~l~~l~~-~g~~~~~~Tn~~~~~~~~~~~l~~~G~   87 (313)
                      .+|+||+||||++.      ..+.+.+.++|++|.+ .|+.++++|  ||+...+.+.+..+++
T Consensus        15 ~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~S--GR~~~~~~~~~~~~~~   76 (266)
T PRK10187         15 YAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALIS--GRSMVELDALAKPYRF   76 (266)
T ss_pred             EEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEe--CCCHHHHHHhcCcccc
Confidence            58999999999983      3556789999999998 799999999  9988888777766654

>TIGR01686 FkbH FkbH-like domain

Probab=99.03  E-value=9e-10  Score=101.44  Aligned_cols=39  Identities=5%  Similarity=0.015  Sum_probs=36.9

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCC
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGI  265 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~  265 (313)
                      ||+|..+..+++++|+++++++||||++ .|+.++++++-
T Consensus        86 ~pk~~~i~~~~~~l~i~~~~~vfidD~~-~d~~~~~~~lp  124 (320)
T TIGR01686        86 GPKSESLRKIAKKLNLGTDSFLFIDDNP-AERANVKITLP  124 (320)
T ss_pred             CchHHHHHHHHHHhCCCcCcEEEECCCH-HHHHHHHHHCC
Confidence            8999999999999999999999999996 99999999774

The C-terminal portion of this domain is unique to this family (by BLAST).

>PTZ00445 p36-lilke protein; Provisional

Probab=99.02  E-value=2.8e-09  Score=90.21  Aligned_cols=49  Identities=18%  Similarity=0.348  Sum_probs=45.4

Q ss_pred             cCCCCHHH--H--HHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350          224 MGKPDKII--Y--KSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGG  273 (313)
Q Consensus       224 ~gKP~~~~--~--~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G  273 (313)
                      +-||+|.+  |  +.+++++|++|++|+.|-|+. ..+++|++.|+.++++..+
T Consensus       155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~-~NVeaA~~lGi~ai~f~~~  207 (219)
T PTZ00445        155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDM-NNCKNALKEGYIALHVTGN  207 (219)
T ss_pred             ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCH-HHHHHHHHCCCEEEEcCCh
Confidence            33999999  9  999999999999999999996 8899999999999999864

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.00  E-value=8.1e-10  Score=90.29  Aligned_cols=38  Identities=21%  Similarity=0.215  Sum_probs=34.4

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCc
Q 021350          225 GKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQ  266 (313)
Q Consensus       225 gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~  266 (313)
                      +||+   |..+++++|.+|++|+||||++ .|+++++++|+.
T Consensus       100 ~KP~---~~k~l~~l~~~p~~~i~i~Ds~-~~~~aa~~ngI~  137 (148)
T smart00577      100 VKGK---YVKDLSLLGRDLSNVIIIDDSP-DSWPFHPENLIP  137 (148)
T ss_pred             cCCe---EeecHHHcCCChhcEEEEECCH-HHhhcCccCEEE
Confidence            3887   8999999999999999999996 999999988854

>PLN02382 probable sucrose-phosphatase

Probab=98.91  E-value=2.4e-08  Score=94.85  Aligned_cols=48  Identities=17%  Similarity=0.241  Sum_probs=41.9

Q ss_pred             eecCCCCHHHHHHHHHHh---CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350          222 RWMGKPDKIIYKSAMAMV---GVDACDSIAVGDSLHHDIKGANAAGIQSVFIIG  272 (313)
Q Consensus       222 ~~~gKP~~~~~~~~~~~l---gv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~  272 (313)
                      ..++|..  ++.++++++   |++++++++|||+. ||++|.+.+|..+|.|..
T Consensus       172 ~g~sKg~--Al~~L~~~~~~~gi~~~~~iafGDs~-NDleMl~~ag~~gvam~N  222 (413)
T PLN02382        172 QGAGKGQ--ALAYLLKKLKAEGKAPVNTLVCGDSG-NDAELFSVPDVYGVMVSN  222 (413)
T ss_pred             CCCCHHH--HHHHHHHHhhhcCCChhcEEEEeCCH-HHHHHHhcCCCCEEEEcC
Confidence            3455776  999999999   99999999999995 999999999987888855

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=98.89  E-value=3.5e-09  Score=90.98  Aligned_cols=92  Identities=14%  Similarity=0.082  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-h--cCce--eecCCCCHHHHHHHHHHhCCCCC
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-L--GGEV--RWMGKPDKIIYKSAMAMVGVDAC  244 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~--~~~~--~~~gKP~~~~~~~~~~~lgv~~~  244 (313)
                      ++++.+++..++++ .++ ++||....+.......++   +...+.. +  ....  ....+|.|.....++++++..++
T Consensus        70 ~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~g---l~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~  145 (205)
T PRK13582         70 LPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLG---WPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGY  145 (205)
T ss_pred             CCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcC---CchhhcceEEECCCCeEECccccccchHHHHHHHHHHhCC
Confidence            57889999999888 787 788866543322111111   1122211 1  0011  11112334456677777777889


Q ss_pred             cEEEEcCCchhhHHHHHHcCCcE
Q 021350          245 DSIAVGDSLHHDIKGANAAGIQS  267 (313)
Q Consensus       245 ~~v~IGDs~~~Di~~a~~aG~~~  267 (313)
                      +|+||||+. +|+.+++++|+..
T Consensus       146 ~~v~iGDs~-~D~~~~~aa~~~v  167 (205)
T PRK13582        146 RVIAAGDSY-NDTTMLGEADAGI  167 (205)
T ss_pred             eEEEEeCCH-HHHHHHHhCCCCE
Confidence            999999996 9999999999744

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=98.82  E-value=1.2e-08  Score=81.88  Aligned_cols=58  Identities=31%  Similarity=0.476  Sum_probs=45.0

Q ss_pred             CccEEEEeccceeecCCccCccHH-----------HHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           29 RFKAWLLDQFGVLHDGKKPYPGAI-----------STLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~~~~~a~-----------~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      ++|.++||+||||.|+.-.+...-           -.|..|++.|+++.++|  +|...-+.++.+.+|+.
T Consensus         7 ~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~~Gi~vAIIT--Gr~s~ive~Ra~~LGI~   75 (170)
T COG1778           7 NIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLKSGIKVAIIT--GRDSPIVEKRAKDLGIK   75 (170)
T ss_pred             hceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHHcCCeEEEEe--CCCCHHHHHHHHHcCCc
Confidence            799999999999999765442211           25777888999999988  77777777788888875

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=98.81  E-value=1.5e-08  Score=87.86  Aligned_cols=125  Identities=14%  Similarity=0.103  Sum_probs=72.8

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhcc-CCchHHHHHHHhcCceeecCCCCHHHH----------HHHHHH
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRV-MPGTLASKFEKLGGEVRWMGKPDKIIY----------KSAMAM  238 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~gKP~~~~~----------~~~~~~  238 (313)
                      ++++.+.+..++++|.++ ++|++...+...-...+ ....+...-..++.......||+|..+          ..++++
T Consensus        72 ~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~l~~  151 (214)
T TIGR03333        72 REGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSLIRK  151 (214)
T ss_pred             cccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHHHHH
Confidence            478899999999999998 77875442221110001 000100000012234456678887765          467777


Q ss_pred             hCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCC-CcccccCCCCccchhhHHHHHh
Q 021350          239 VGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHA-TELGLDSYGEVADLSSVQTLVS  298 (313)
Q Consensus       239 lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~-~~~~~~~~~~~~~~~~~~~~~~  298 (313)
                      ++..+++++||||+. +|+.+|++||+  +++...... .+......-+..++.++.+++.
T Consensus       152 ~~~~~~~~i~iGDg~-~D~~~a~~Ad~--~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~  209 (214)
T TIGR03333       152 LSEPNDYHIVIGDSV-TDVEAAKQSDL--CFARDYLLNECEELGLNHAPFQDFYDVRKELE  209 (214)
T ss_pred             HhhcCCcEEEEeCCH-HHHHHHHhCCe--eEehHHHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence            878899999999995 99999999997  454431100 0111122333455666665554

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=98.81  E-value=6.6e-09  Score=92.19  Aligned_cols=181  Identities=19%  Similarity=0.163  Sum_probs=95.5

Q ss_pred             cEEEEeccceeecCCcc-CccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHHHHHHHHhc
Q 021350           31 KAWLLDQFGVLHDGKKP-YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRR  109 (313)
Q Consensus        31 k~iifDlDGTL~~~~~~-~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l~~~  109 (313)
                      ..+++|+||||+++... ...-.+.++...+.++.++++|  ||+.+++.+.+++.+++.+  +.++++.          
T Consensus         3 ~ll~sDlD~Tl~~~~~~~~~~l~~~l~~~~~~~~~~v~~T--GRs~~~~~~~~~~~~l~~P--d~~I~sv----------   68 (247)
T PF05116_consen    3 RLLASDLDGTLIDGDDEALARLEELLEQQARPEILFVYVT--GRSLESVLRLLREYNLPQP--DYIITSV----------   68 (247)
T ss_dssp             EEEEEETBTTTBHCHHHHHHHHHHHHHHHHCCGEEEEEE---SS-HHHHHHHHHHCT-EE---SEEEETT----------
T ss_pred             EEEEEECCCCCcCCCHHHHHHHHHHHHHhhCCCceEEEEC--CCCHHHHHHHHHhCCCCCC--CEEEecC----------
Confidence            57999999999943322 2222233332335666677777  9999999999999888643  4556554          


Q ss_pred             CchhhhhcCCeEEEeecCcccc----------------hhhccC-CccccCCCCC----CCEEEecCCCCCCCCCCCCCC
Q 021350          110 DDAWFAALGRSCIHMTWSDRGA----------------ISLEGL-GLKVVENVEE----ADFILAHGTEGMGLPSGDVRP  168 (313)
Q Consensus       110 ~~~~~~~~g~~~~~~~~~~~~~----------------~~l~~~-g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  168 (313)
                              |..+|+........                ..+.+. ++..-+....    ..+.+.             . 
T Consensus        69 --------Gt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~-------------~-  126 (247)
T PF05116_consen   69 --------GTEIYYGENWQPDEEWQAHIDERWDRERVEEILAELPGLRPQPESEQRPFKISYYVD-------------P-  126 (247)
T ss_dssp             --------TTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEE-------------T-
T ss_pred             --------CeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEe-------------c-
Confidence                    44444311000000                011110 1110000000    011111             1 


Q ss_pred             CCHHH-HHHHHHHHHhCCCcE--EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCc
Q 021350          169 MSLQD-LEKILEICASKKIPM--VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACD  245 (313)
Q Consensus       169 ~~~~~-~~~~l~~l~~~g~~~--i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~  245 (313)
                      -.... +.++-..+.+.+...  +.++...+.                     .-|...+|.+  +..++++++++++++
T Consensus       127 ~~~~~~~~~i~~~l~~~~l~~~~i~s~~~~ld---------------------ilP~~a~K~~--Al~~L~~~~~~~~~~  183 (247)
T PF05116_consen  127 DDSADILEEIRARLRQRGLRVNVIYSNGRDLD---------------------ILPKGASKGA--ALRYLMERWGIPPEQ  183 (247)
T ss_dssp             TSHCHHHHHHHHHHHCCTCEEEEEECTCCEEE---------------------EEETT-SHHH--HHHHHHHHHT--GGG
T ss_pred             ccchhHHHHHHHHHHHcCCCeeEEEccceeEE---------------------EccCCCCHHH--HHHHHHHHhCCCHHH
Confidence            11222 444444556677765  344432211                     1133455666  999999999999999


Q ss_pred             EEEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350          246 SIAVGDSLHHDIKGANAAGIQSVFIIG  272 (313)
Q Consensus       246 ~v~IGDs~~~Di~~a~~aG~~~i~V~~  272 (313)
                      ++++|||. ||+.|. ..+..+|.|.-
T Consensus       184 vl~aGDSg-ND~~mL-~~~~~~vvV~N  208 (247)
T PF05116_consen  184 VLVAGDSG-NDLEML-EGGDHGVVVGN  208 (247)
T ss_dssp             EEEEESSG-GGHHHH-CCSSEEEE-TT
T ss_pred             EEEEeCCC-CcHHHH-cCcCCEEEEcC
Confidence            99999996 999999 67778887765

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=98.77  E-value=3.6e-08  Score=83.18  Aligned_cols=89  Identities=10%  Similarity=0.075  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcC--------------------ceeecCCCC
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGG--------------------EVRWMGKPD  228 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~--------------------~~~~~gKP~  228 (313)
                      ++++.++++.|+++|+++ ++||............+   .+...++. .+.                    .....|.++
T Consensus        74 ~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K  150 (188)
T TIGR01489        74 DPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGI---GEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK  150 (188)
T ss_pred             CccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHc---CChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence            356888888888888887 77876543221110001   11122221 110                    112344445


Q ss_pred             HHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCc
Q 021350          229 KIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQ  266 (313)
Q Consensus       229 ~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~  266 (313)
                      +.+++.+.++.   ++++++|||+. +|+.+|+++++-
T Consensus       151 ~~~~~~~~~~~---~~~~i~iGD~~-~D~~aa~~~d~~  184 (188)
T TIGR01489       151 GKVIHKLSEPK---YQHIIYIGDGV-TDVCPAKLSDVV  184 (188)
T ss_pred             HHHHHHHHhhc---CceEEEECCCc-chhchHhcCCcc
Confidence            66888887765   89999999996 999999998653

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>PLN02423 phosphomannomutase

Probab=98.75  E-value=1.1e-07  Score=84.36  Aligned_cols=53  Identities=17%  Similarity=0.196  Sum_probs=42.5

Q ss_pred             CccEEE-EeccceeecCCccC-ccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHh
Q 021350           29 RFKAWL-LDQFGVLHDGKKPY-PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKS   84 (313)
Q Consensus        29 ~~k~ii-fDlDGTL~~~~~~~-~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~   84 (313)
                      +++.++ ||+||||+++.+-+ +.+.++|++|++. +.++++|  ||....+.+.+..
T Consensus         5 ~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l~~~-i~fviaT--GR~~~~~~~~~~~   59 (245)
T PLN02423          5 KPGVIALFDVDGTLTAPRKEATPEMLEFMKELRKV-VTVGVVG--GSDLSKISEQLGK   59 (245)
T ss_pred             ccceEEEEeccCCCcCCCCcCCHHHHHHHHHHHhC-CEEEEEC--CcCHHHHHHHhcc
Confidence            577666 99999999987654 6788999999976 9999999  8866666666653

>TIGR00685 T6PP trehalose-phosphatase

Probab=98.73  E-value=2e-07  Score=82.53  Aligned_cols=48  Identities=21%  Similarity=0.225  Sum_probs=41.1

Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHc-------CCcEEEEcCCC
Q 021350          224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAA-------GIQSVFIIGGI  274 (313)
Q Consensus       224 ~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~a-------G~~~i~V~~G~  274 (313)
                      ..|+.  .++.++++++++++++++|||+. +|+.+++.+       |..++.|..|.
T Consensus       166 ~~Kg~--a~~~~~~~~~~~~~~~i~iGD~~-~D~~~~~~~~~~~~~~g~~~v~v~~g~  220 (244)
T TIGR00685       166 VNKGE--IVKRLLWHQPGSGISPVYLGDDI-TDEDAFRVVNNQWGNYGFYPVPIGSGS  220 (244)
T ss_pred             CCHHH--HHHHHHHhcccCCCceEEEcCCC-cHHHHHHHHhcccCCCCeEEEEEecCC
Confidence            33444  99999999999999999999996 999999999       77888887653

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=98.71  E-value=3.3e-08  Score=82.73  Aligned_cols=92  Identities=22%  Similarity=0.218  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchH-HHHHHH------hc---CceeecCCCCHHHHHHHHHHh
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTL-ASKFEK------LG---GEVRWMGKPDKIIYKSAMAMV  239 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~-~~~~~~------~~---~~~~~~gKP~~~~~~~~~~~l  239 (313)
                      ++++.+.++.++++|.++ ++|+....+...-...++...+ ...+..      .+   ..+...+..+...+...++++
T Consensus        75 ~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~~~~  154 (177)
T TIGR01488        75 RPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELLEES  154 (177)
T ss_pred             CcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHHHHh
Confidence            367888888888888888 6777554322211111111110 000000      00   001122333455888888889


Q ss_pred             CCCCCcEEEEcCCchhhHHHHHHc
Q 021350          240 GVDACDSIAVGDSLHHDIKGANAA  263 (313)
Q Consensus       240 gv~~~~~v~IGDs~~~Di~~a~~a  263 (313)
                      +++++++++|||+. +|+.+++.+
T Consensus       155 ~~~~~~~~~iGDs~-~D~~~~~~a  177 (177)
T TIGR01488       155 KITLKKIIAVGDSV-NDLPMLKLA  177 (177)
T ss_pred             CCCHHHEEEEeCCH-HHHHHHhcC
Confidence            99999999999996 999999864

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=98.68  E-value=2.9e-08  Score=85.06  Aligned_cols=99  Identities=17%  Similarity=0.162  Sum_probs=64.3

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchH-HHHHH-----HhcCc---eeecCCCCHHHHHHHHHHh
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTL-ASKFE-----KLGGE---VRWMGKPDKIIYKSAMAMV  239 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~-~~~~~-----~~~~~---~~~~gKP~~~~~~~~~~~l  239 (313)
                      .++++.+.++.++++|.++ ++|+....+...-...++...+ ..-+.     ...++   +...|+++...++.++++.
T Consensus        88 ~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~  167 (202)
T TIGR01490        88 LYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLAEE  167 (202)
T ss_pred             ccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHHHc
Confidence            3578899999998999888 7887554322211111111111 11010     01111   2234566777899999999


Q ss_pred             CCCCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 021350          240 GVDACDSIAVGDSLHHDIKGANAAGIQSVF  269 (313)
Q Consensus       240 gv~~~~~v~IGDs~~~Di~~a~~aG~~~i~  269 (313)
                      ++++++|+++||+. +|+.+++.+|...+.
T Consensus       168 ~~~~~~~~~~gDs~-~D~~~~~~a~~~~~v  196 (202)
T TIGR01490       168 QIDLKDSYAYGDSI-SDLPLLSLVGHPYVV  196 (202)
T ss_pred             CCCHHHcEeeeCCc-ccHHHHHhCCCcEEe
Confidence            99999999999996 999999999966543

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=98.59  E-value=1.2e-07  Score=81.69  Aligned_cols=94  Identities=14%  Similarity=0.072  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH---h-c-Cc---eeecCCCCHHHHHHHHHHhCC
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK---L-G-GE---VRWMGKPDKIIYKSAMAMVGV  241 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~---~-~-~~---~~~~gKP~~~~~~~~~~~lgv  241 (313)
                      ++++.+.++.+++++ ++ ++|++...+...-...++..   ..+..   . + +.   .....||.+......+++.+.
T Consensus        70 ~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~---~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~~  145 (203)
T TIGR02137        70 LEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFP---TLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYY  145 (203)
T ss_pred             CccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCc---hhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhCC
Confidence            578888888888775 55 78876543322111111111   11110   0 1 10   111345666655555566653


Q ss_pred             CCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350          242 DACDSIAVGDSLHHDIKGANAAGIQSVFIIG  272 (313)
Q Consensus       242 ~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~  272 (313)
                         +|++|||+. ||+.+++++|...++-..
T Consensus       146 ---~~v~vGDs~-nDl~ml~~Ag~~ia~~ak  172 (203)
T TIGR02137       146 ---RVIAAGDSY-NDTTMLSEAHAGILFHAP  172 (203)
T ss_pred             ---CEEEEeCCH-HHHHHHHhCCCCEEecCC
Confidence               899999996 999999999988777655

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=98.53  E-value=2.3e-07  Score=79.77  Aligned_cols=82  Identities=21%  Similarity=0.232  Sum_probs=63.2

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCce---eec--CCCCHHHHHHHHHHhCCCC
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEV---RWM--GKPDKIIYKSAMAMVGVDA  243 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~--gKP~~~~~~~~~~~lgv~~  243 (313)
                      .++++.+++..|++.|+++ ++|+.....            .......+|...   ...  +||++.+|..+++++++++
T Consensus       128 ~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~------------a~~~~~~lgi~~~~v~a~~~~kP~~k~~~~~i~~l~~~~  195 (215)
T PF00702_consen  128 LRPGAKEALQELKEAGIKVAILTGDNEST------------ASAIAKQLGIFDSIVFARVIGKPEPKIFLRIIKELQVKP  195 (215)
T ss_dssp             BHTTHHHHHHHHHHTTEEEEEEESSEHHH------------HHHHHHHTTSCSEEEEESHETTTHHHHHHHHHHHHTCTG
T ss_pred             chhhhhhhhhhhhccCcceeeeecccccc------------ccccccccccccccccccccccccchhHHHHHHHHhcCC
Confidence            4689999999999999988 777643311            112223344421   111  5999999999999999999


Q ss_pred             CcEEEEcCCchhhHHHHHHcC
Q 021350          244 CDSIAVGDSLHHDIKGANAAG  264 (313)
Q Consensus       244 ~~~v~IGDs~~~Di~~a~~aG  264 (313)
                      ++|+||||++ ||+.|+++||
T Consensus       196 ~~v~~vGDg~-nD~~al~~Ag  215 (215)
T PF00702_consen  196 GEVAMVGDGV-NDAPALKAAG  215 (215)
T ss_dssp             GGEEEEESSG-GHHHHHHHSS
T ss_pred             CEEEEEccCH-HHHHHHHhCc
Confidence            9999999998 9999999997

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=98.42  E-value=2.8e-06  Score=75.81  Aligned_cols=61  Identities=31%  Similarity=0.475  Sum_probs=47.5

Q ss_pred             CccEEEEeccceeecCC---------------------------ccCccHHHHHHHHHHCCCcEEEEeCCCCC-chHHHH
Q 021350           29 RFKAWLLDQFGVLHDGK---------------------------KPYPGAISTLEMLATTGAKMVVISNSSRR-ASTTID   80 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~---------------------------~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~-~~~~~~   80 (313)
                      +..+|+||+|+|+++..                           .++||+.++++.|+++|+++.++||.... .+....
T Consensus        74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~  153 (266)
T TIGR01533        74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLK  153 (266)
T ss_pred             CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHH
Confidence            56799999999997522                           25789999999999999999999986643 345667


Q ss_pred             HHHhCCCCC
Q 021350           81 KLKSLGFDP   89 (313)
Q Consensus        81 ~l~~~G~~~   89 (313)
                      .|+.+|++.
T Consensus       154 ~Lkk~Gi~~  162 (266)
T TIGR01533       154 NLKRFGFPQ  162 (266)
T ss_pred             HHHHcCcCC
Confidence            777778763

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>TIGR01684 viral_ppase viral phosphatase

Probab=98.42  E-value=4.2e-07  Score=81.16  Aligned_cols=68  Identities=18%  Similarity=0.273  Sum_probs=55.8

Q ss_pred             CccEEEEeccceeecCCcc----CccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350           29 RFKAWLLDQFGVLHDGKKP----YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~~----~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~   99 (313)
                      .++.|+||+||||++.++.    -|++.++|.+|+++|+++.++||++  .+.+...++.+|+.... +.+++.+
T Consensus       125 ~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~LkekGikLaIaTS~~--Re~v~~~L~~lGLd~YF-dvIIs~G  196 (301)
T TIGR01684       125 PPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKRGCILVLWSYGD--RDHVVESMRKVKLDRYF-DIIISGG  196 (301)
T ss_pred             cceEEEEecCCCCcCCCCccccCCHHHHHHHHHHHHCCCEEEEEECCC--HHHHHHHHHHcCCCccc-CEEEECC
Confidence            5789999999999998764    3899999999999999999999765  44555789999998655 5555554

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=98.39  E-value=5.7e-06  Score=85.18  Aligned_cols=54  Identities=26%  Similarity=0.313  Sum_probs=44.8

Q ss_pred             CccEEEEeccceeecCC----ccCccHHHHHHHH-HHCCCcEEEEeCCCCCchHHHHHHHh
Q 021350           29 RFKAWLLDQFGVLHDGK----KPYPGAISTLEML-ATTGAKMVVISNSSRRASTTIDKLKS   84 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~----~~~~~a~~~l~~l-~~~g~~~~~~Tn~~~~~~~~~~~l~~   84 (313)
                      +.++|++|+||||+...    .+-++..+.|++| ...|..++++|  ||..+++.+.+..
T Consensus       595 ~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvS--GR~~~~L~~~f~~  653 (854)
T PLN02205        595 TTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVS--ARSRKTLADWFSP  653 (854)
T ss_pred             cCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEe--CCCHHHHHHHhCC
Confidence            56899999999999644    3446788999998 56899999999  9988888888864

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=98.35  E-value=2.1e-06  Score=71.32  Aligned_cols=48  Identities=15%  Similarity=0.268  Sum_probs=35.1

Q ss_pred             HHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          230 IIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       230 ~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      ..|..+.+..|++.++++.|-|.. ..+.-..+.|+.+++|..|.+...
T Consensus       111 ~Hf~~i~~~tgI~y~eMlFFDDe~-~N~~~v~~lGV~~v~v~~Glt~~~  158 (169)
T PF12689_consen  111 THFRRIHRKTGIPYEEMLFFDDES-RNIEVVSKLGVTCVLVPDGLTWDE  158 (169)
T ss_dssp             HHHHHHHHHH---GGGEEEEES-H-HHHHHHHTTT-EEEE-SSS--HHH
T ss_pred             HHHHHHHHhcCCChhHEEEecCch-hcceeeEecCcEEEEeCCCCCHHH
Confidence            379999999999999999999995 778888899999999999887543

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=98.32  E-value=6.4e-06  Score=84.11  Aligned_cols=56  Identities=25%  Similarity=0.175  Sum_probs=45.3

Q ss_pred             CccEEEEeccceeecCC------ccCccHHHHHHHHHH-CCCcEEEEeCCCCCchHHHHHHHhCC
Q 021350           29 RFKAWLLDQFGVLHDGK------KPYPGAISTLEMLAT-TGAKMVVISNSSRRASTTIDKLKSLG   86 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~------~~~~~a~~~l~~l~~-~g~~~~~~Tn~~~~~~~~~~~l~~~G   86 (313)
                      +.++|+||+||||++..      .+.+.+.++|++|.+ .|..++++|  ||....+.+.+..++
T Consensus       491 ~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivS--GR~~~~l~~~~~~~~  553 (726)
T PRK14501        491 SRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIIS--GRDRDTLERWFGDLP  553 (726)
T ss_pred             cceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEe--CCCHHHHHHHhCCCC
Confidence            67999999999999732      244678899999999 599999999  888888877765443

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=98.27  E-value=7.5e-06  Score=67.42  Aligned_cols=101  Identities=12%  Similarity=0.146  Sum_probs=71.9

Q ss_pred             CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcE
Q 021350          169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDS  246 (313)
Q Consensus       169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~  246 (313)
                      -.|++.-+.++.-++.|+++ |.|++..-.+.---.+...|.+.++|.. +..  +.-+|-.-..|..+++..|++|.++
T Consensus       103 hlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDt--tiG~KrE~~SY~kIa~~iGl~p~ei  180 (229)
T COG4229         103 HLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDT--TIGKKRESQSYAKIAGDIGLPPAEI  180 (229)
T ss_pred             ccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeec--cccccccchhHHHHHHhcCCCchhe
Confidence            34788888888888999998 5555554221100012334445555543 211  2334777778999999999999999


Q ss_pred             EEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350          247 IAVGDSLHHDIKGANAAGIQSVFIIG  272 (313)
Q Consensus       247 v~IGDs~~~Di~~a~~aG~~~i~V~~  272 (313)
                      +++.|++ ..+.+|+.+|+.++++.+
T Consensus       181 lFLSDn~-~EL~AA~~vGl~t~l~~R  205 (229)
T COG4229         181 LFLSDNP-EELKAAAGVGLATGLAVR  205 (229)
T ss_pred             EEecCCH-HHHHHHHhcchheeeeec
Confidence            9999997 999999999999988876

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=98.24  E-value=3.5e-06  Score=72.97  Aligned_cols=98  Identities=20%  Similarity=0.222  Sum_probs=61.4

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchH-HHHHHH----hcC---ceeecCCCCHHHHHHHHHHhCC
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTL-ASKFEK----LGG---EVRWMGKPDKIIYKSAMAMVGV  241 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~-~~~~~~----~~~---~~~~~gKP~~~~~~~~~~~lgv  241 (313)
                      +++..+.+..+++.|.++ ++|.+...+...-...++.... ...++.    +++   .+...++-+...+..+++.+|+
T Consensus        79 ~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~~g~  158 (212)
T COG0560          79 TPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAELGI  158 (212)
T ss_pred             CccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHHcCC
Confidence            478888888889999888 6665433221111011111111 111110    111   1233445566688899999999


Q ss_pred             CCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 021350          242 DACDSIAVGDSLHHDIKGANAAGIQSVF  269 (313)
Q Consensus       242 ~~~~~v~IGDs~~~Di~~a~~aG~~~i~  269 (313)
                      ++++++++||+. ||+.|.+.+|...++
T Consensus       159 ~~~~~~a~gDs~-nDlpml~~ag~~ia~  185 (212)
T COG0560         159 PLEETVAYGDSA-NDLPMLEAAGLPIAV  185 (212)
T ss_pred             CHHHeEEEcCch-hhHHHHHhCCCCeEe
Confidence            999999999995 999999999965544

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=98.20  E-value=4.2e-06  Score=66.12  Aligned_cols=45  Identities=24%  Similarity=0.284  Sum_probs=36.3

Q ss_pred             cEEEEeccceeecCC-c------cCccHHHHHHHHHHCCCcEEEEeCCCCCchH
Q 021350           31 KAWLLDQFGVLHDGK-K------PYPGAISTLEMLATTGAKMVVISNSSRRAST   77 (313)
Q Consensus        31 k~iifDlDGTL~~~~-~------~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~   77 (313)
                      |+|+||+||||.+.+ .      +.+++.+++++++++|+.++++|  +|+...
T Consensus         2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaT--GR~~~~   53 (126)
T TIGR01689         2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISS--SRNMRT   53 (126)
T ss_pred             CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEEC--CCCchh
Confidence            799999999998753 1      34678888888899999999999  665543

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=98.15  E-value=3.9e-06  Score=75.10  Aligned_cols=68  Identities=19%  Similarity=0.228  Sum_probs=55.0

Q ss_pred             CccEEEEeccceeecCCcc----CccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350           29 RFKAWLLDQFGVLHDGKKP----YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~~----~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~   99 (313)
                      .++.|+||+||||+++++-    -|++.++|.+|+++|+++.++||+.  .+.+...++.+|+.... +-+++++
T Consensus       127 ~~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkekGikLaIvTNg~--Re~v~~~Le~lgL~~yF-DvII~~g  198 (303)
T PHA03398        127 IPHVIVFDLDSTLITDEEPVRIRDPFVYDSLDELKERGCVLVLWSYGN--REHVVHSLKETKLEGYF-DIIICGG  198 (303)
T ss_pred             eccEEEEecCCCccCCCCccccCChhHHHHHHHHHHCCCEEEEEcCCC--hHHHHHHHHHcCCCccc-cEEEECC
Confidence            5689999999999998765    3889999999999999999999765  34556778889997554 5555554

>PRK08238 hypothetical protein; Validated

Probab=98.11  E-value=3.2e-05  Score=74.89  Aligned_cols=93  Identities=13%  Similarity=0.048  Sum_probs=60.9

Q ss_pred             HHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEE
Q 021350          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAV  249 (313)
Q Consensus       172 ~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~I  249 (313)
                      +++.+.++.++++|.++ ++|+.+......-...++      +++. .+.+.....||++.. ..+.+.++  .++++++
T Consensus        75 pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lG------lFd~Vigsd~~~~~kg~~K~-~~l~~~l~--~~~~~yv  145 (479)
T PRK08238         75 EEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLG------LFDGVFASDGTTNLKGAAKA-AALVEAFG--ERGFDYA  145 (479)
T ss_pred             hhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcC------CCCEEEeCCCccccCCchHH-HHHHHHhC--ccCeeEe
Confidence            78999999999999998 888866532221100010      0222 233333445665443 33445565  4669999


Q ss_pred             cCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          250 GDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       250 GDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      ||+. +|+.+++.+| ..+.|..+..
T Consensus       146 GDS~-~Dlp~~~~A~-~av~Vn~~~~  169 (479)
T PRK08238        146 GNSA-ADLPVWAAAR-RAIVVGASPG  169 (479)
T ss_pred             cCCH-HHHHHHHhCC-CeEEECCCHH
Confidence            9996 9999999999 8889987643

>smart00775 LNS2 LNS2 domain

Probab=98.10  E-value=5.8e-06  Score=68.15  Aligned_cols=51  Identities=16%  Similarity=0.226  Sum_probs=41.0

Q ss_pred             EEEEeccceeecCC------------ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHH---HHHHHh
Q 021350           32 AWLLDQFGVLHDGK------------KPYPGAISTLEMLATTGAKMVVISNSSRRASTT---IDKLKS   84 (313)
Q Consensus        32 ~iifDlDGTL~~~~------------~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~---~~~l~~   84 (313)
                      .|+||+||||+++.            ...|++.+++++++++|++++++|  +|+...+   .+.+.+
T Consensus         1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~T--GRp~~~~~~t~~~l~~   66 (157)
T smart00775        1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLT--ARPIGQADRTRSYLSQ   66 (157)
T ss_pred             CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEc--CCcHHHHHHHHHHHHH
Confidence            48999999999986            456899999999999999999999  6664333   345544

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>PLN02580 trehalose-phosphatase

Probab=98.06  E-value=0.00022  Score=66.73  Aligned_cols=54  Identities=19%  Similarity=0.095  Sum_probs=41.6

Q ss_pred             cEEEEeccceeec------CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCC
Q 021350           31 KAWLLDQFGVLHD------GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGF   87 (313)
Q Consensus        31 k~iifDlDGTL~~------~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~   87 (313)
                      -++++|.||||..      .-.+.++..++|+.|.+.. ++.++|  ||..+++.+.+.-.++
T Consensus       120 ~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~~-~VAIVS--GR~~~~L~~~l~~~~l  179 (384)
T PLN02580        120 IALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKYF-PTAIIS--GRSRDKVYELVGLTEL  179 (384)
T ss_pred             eEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhCC-CEEEEe--CCCHHHHHHHhCCCCc
Confidence            5788899999975      2234567888999998874 799999  9988888877754444

>PLN03017 trehalose-phosphatase

Probab=98.04  E-value=0.00022  Score=66.28  Aligned_cols=49  Identities=18%  Similarity=0.135  Sum_probs=39.3

Q ss_pred             cEEEEeccceee---c-CC--ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHH
Q 021350           31 KAWLLDQFGVLH---D-GK--KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKL   82 (313)
Q Consensus        31 k~iifDlDGTL~---~-~~--~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l   82 (313)
                      -+|++|+||||.   + ..  .+.++..++|++|. ++.++.++|  ||....+.+.+
T Consensus       112 ~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvS--GR~~~~l~~~~  166 (366)
T PLN03017        112 IVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVT--GRCIDKVYNFV  166 (366)
T ss_pred             eEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEe--CCCHHHHHHhh
Confidence            568889999999   3 33  35678899999999 788999999  88887776654

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=97.97  E-value=1.7e-05  Score=73.18  Aligned_cols=104  Identities=13%  Similarity=0.110  Sum_probs=68.2

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhcc-C----CchHHHHHHHh---cCceee---------------cCC
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRV-M----PGTLASKFEKL---GGEVRW---------------MGK  226 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~-~----~g~~~~~~~~~---~~~~~~---------------~gK  226 (313)
                      .+++.++|..++++|.++ ++||.+......--..+ +    ...+...|+.+   ..+|.+               ..|
T Consensus       186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~~~  265 (343)
T TIGR02244       186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETGSLK  265 (343)
T ss_pred             chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCCccc
Confidence            578999999999999998 89998764332111011 1    01123333321   111110               001


Q ss_pred             CCH------------HHHHHHHHHhCCCCCcEEEEcCCchhhHHHHH-HcCCcEEEEcCCC
Q 021350          227 PDK------------IIYKSAMAMVGVDACDSIAVGDSLHHDIKGAN-AAGIQSVFIIGGI  274 (313)
Q Consensus       227 P~~------------~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~-~aG~~~i~V~~G~  274 (313)
                      +..            .....+.+.+|+++++++||||++.+||.+++ .+||+|++|....
T Consensus       266 ~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pEL  326 (343)
T TIGR02244       266 WGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPEL  326 (343)
T ss_pred             CCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchhH
Confidence            111            12567788899999999999999999999998 9999999998733

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=97.89  E-value=0.00025  Score=60.38  Aligned_cols=58  Identities=22%  Similarity=0.186  Sum_probs=46.8

Q ss_pred             CccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      ...+|+.|+||||+.-.--...|...+..|++.|.+++++|  +.+..++...-+.+|++
T Consensus         6 ~~~lIFtDlD~TLl~~~ye~~pA~pv~~el~d~G~~Vi~~S--SKT~aE~~~l~~~l~v~   63 (274)
T COG3769           6 MPLLIFTDLDGTLLPHSYEWQPAAPVLLELKDAGVPVILCS--SKTRAEMLYLQKSLGVQ   63 (274)
T ss_pred             cceEEEEcccCcccCCCCCCCccchHHHHHHHcCCeEEEec--cchHHHHHHHHHhcCCC
Confidence            56789999999999822224568889999999999999988  66677777777788887

>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=97.86  E-value=0.00015  Score=58.10  Aligned_cols=107  Identities=23%  Similarity=0.216  Sum_probs=72.3

Q ss_pred             CCCCHHHHHHHHHHHHhC-C-Cc-EEEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHH-hC-
Q 021350          167 RPMSLQDLEKILEICASK-K-IP-MVVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAM-VG-  240 (313)
Q Consensus       167 ~~~~~~~~~~~l~~l~~~-g-~~-~i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~-lg-  240 (313)
                      ..+.++ ..+-++.|+.. | .- +++||.--....++     .++.++.++. .|......++-+|..-....+. +| 
T Consensus        60 ~~Iwp~-~l~~ie~~~~vygek~i~v~SNsaG~~~~D~-----d~s~Ak~le~k~gIpVlRHs~kKP~ct~E~~~y~~~N  133 (190)
T KOG2961|consen   60 LAIWPP-LLPSIERCKAVYGEKDIAVFSNSAGLTEYDH-----DDSKAKALEAKIGIPVLRHSVKKPACTAEEVEYHFGN  133 (190)
T ss_pred             cccCch-hHHHHHHHHHHhCcccEEEEecCcCccccCC-----chHHHHHHHHhhCCceEeecccCCCccHHHHHHHhCC
Confidence            334443 34444555543 3 33 37787443222222     2466777775 6777666666665566665554 35 


Q ss_pred             ---CCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          241 ---VDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       241 ---v~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                         -.+++++||||++.+||.+|+.+|.-+||+..|....+.
T Consensus       134 shv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~~~n  175 (190)
T KOG2961|consen  134 SHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRAEEN  175 (190)
T ss_pred             cccCChhHeEEEccchhhhHhhhhhccceeEEecccccccch
Confidence               589999999999999999999999999999999987765

>PLN02151 trehalose-phosphatase

Probab=97.78  E-value=0.0012  Score=61.12  Aligned_cols=54  Identities=20%  Similarity=0.111  Sum_probs=41.3

Q ss_pred             cEEEEeccceee----cCC--ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCC
Q 021350           31 KAWLLDQFGVLH----DGK--KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGF   87 (313)
Q Consensus        31 k~iifDlDGTL~----~~~--~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~   87 (313)
                      -++++|.||||.    +-.  .+.+++.++|+.|. .+.++.++|  ||..+.+.+.+.-.++
T Consensus        99 ~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvS--GR~~~~l~~~~~~~~l  158 (354)
T PLN02151         99 IVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVS--GRCREKVSSFVKLTEL  158 (354)
T ss_pred             eEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEE--CCCHHHHHHHcCCccc
Confidence            578899999999    323  45578889999998 456899999  9888888777653333

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=97.76  E-value=1.9e-05  Score=65.45  Aligned_cols=39  Identities=18%  Similarity=0.184  Sum_probs=32.6

Q ss_pred             HHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEc
Q 021350          232 YKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFII  271 (313)
Q Consensus       232 ~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~  271 (313)
                      |.+.+.++|.++++||+|||+. .|+.++.++|+....-.
T Consensus       101 ~~K~L~~l~~~~~~vIiVDD~~-~~~~~~~~NgI~i~~f~  139 (162)
T TIGR02251       101 YVKDLSLVGKDLSKVIIIDNSP-YSYSLQPDNAIPIKSWF  139 (162)
T ss_pred             EEeEchhcCCChhhEEEEeCCh-hhhccCccCEeecCCCC
Confidence            5666778899999999999996 99999999997655544

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=97.72  E-value=0.00012  Score=65.46  Aligned_cols=91  Identities=13%  Similarity=0.135  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCC---c-h-HHHHHHHhcCceeecCCCCH---------HHHHHH
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMP---G-T-LASKFEKLGGEVRWMGKPDK---------IIYKSA  235 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~---g-~-~~~~~~~~~~~~~~~gKP~~---------~~~~~~  235 (313)
                      .+++.+.+..|+++|+++ ++|++-......-...++.   . . +++.+. +..+....|||.|         .+++.+
T Consensus       123 ~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~-f~~dGvltG~~~P~i~~~~K~~~v~~~~  201 (277)
T TIGR01544       123 KDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMD-FDEDGVLKGFKGPLIHTFNKNHDVALRN  201 (277)
T ss_pred             CcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEE-ECCCCeEeCCCCCcccccccHHHHHHHH
Confidence            378999999999999999 7787543211110000000   0 0 011111 1123456778888         778889


Q ss_pred             HHHhC--CCCCcEEEEcCCchhhHHHHHHc
Q 021350          236 MAMVG--VDACDSIAVGDSLHHDIKGANAA  263 (313)
Q Consensus       236 ~~~lg--v~~~~~v~IGDs~~~Di~~a~~a  263 (313)
                      ++.++  .++++|++|||+. +|+.||.-.
T Consensus       202 ~~~~~~~~~~~~vI~vGDs~-~Dl~ma~g~  230 (277)
T TIGR01544       202 TEYFNQLKDRSNIILLGDSQ-GDLRMADGV  230 (277)
T ss_pred             HHHhCccCCcceEEEECcCh-hhhhHhcCC
Confidence            99998  8999999999997 999997633

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>PRK11590 hypothetical protein; Provisional

Probab=97.69  E-value=0.00018  Score=62.13  Aligned_cols=98  Identities=12%  Similarity=-0.000  Sum_probs=52.5

Q ss_pred             HHHHHHHH-HHHHhCCCcE-EEEcCCccccccchhccC----CchHHHHHH-HhcCceeecCCCCH--HHHHHHHHHhCC
Q 021350          171 LQDLEKIL-EICASKKIPM-VVANPDYVTVEARALRVM----PGTLASKFE-KLGGEVRWMGKPDK--IIYKSAMAMVGV  241 (313)
Q Consensus       171 ~~~~~~~l-~~l~~~g~~~-i~tn~d~~~~~~~~~~~~----~g~~~~~~~-~~~~~~~~~gKP~~--~~~~~~~~~lgv  241 (313)
                      ++++.+.+ ..+++.|.++ ++||....+...-...++    ...+..-++ ..++.  ..|.+.-  +=...+.+.++.
T Consensus        97 ~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~l~~~~tg~--~~g~~c~g~~K~~~l~~~~~~  174 (211)
T PRK11590         97 FPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQMQRRYGGW--VLTLRCLGHEKVAQLERKIGT  174 (211)
T ss_pred             CccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceEEEEEEEEEccE--ECCccCCChHHHHHHHHHhCC
Confidence            67888888 5677788887 788865533221100001    000000000 01111  1122111  012233344577


Q ss_pred             CCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350          242 DACDSIAVGDSLHHDIKGANAAGIQSVFIIG  272 (313)
Q Consensus       242 ~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~  272 (313)
                      +.+.+.+-|||. +|+.+...+| ..+.|..
T Consensus       175 ~~~~~~aY~Ds~-~D~pmL~~a~-~~~~vnp  203 (211)
T PRK11590        175 PLRLYSGYSDSK-QDNPLLYFCQ-HRWRVTP  203 (211)
T ss_pred             CcceEEEecCCc-ccHHHHHhCC-CCEEECc
Confidence            888999999996 9999999999 5555543

>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway

Probab=97.59  E-value=0.002  Score=59.37  Aligned_cols=55  Identities=16%  Similarity=0.161  Sum_probs=42.5

Q ss_pred             CccEEEEeccceeecCCccCc---cHHHHHHHHHHCCCcEEEEeCCCCC-chHHHHHHH
Q 021350           29 RFKAWLLDQFGVLHDGKKPYP---GAISTLEMLATTGAKMVVISNSSRR-ASTTIDKLK   83 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~~~~---~a~~~l~~l~~~g~~~~~~Tn~~~~-~~~~~~~l~   83 (313)
                      ..+.|.||=|+||++...-+.   .....|-+|.++|+.+.++|-.|-+ .+.+.++|.
T Consensus       146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~LL~~gv~VgIVTAAGY~~a~kY~~RL~  204 (408)
T PF06437_consen  146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRIIKLLRRGVKVGIVTAAGYPGAEKYEERLH  204 (408)
T ss_pred             CceEEEEcCCcccccCCCCCCCCchHHHHHHHHHhcCCeEEEEeCCCCCChHHHHHHHH
Confidence            578999999999999665542   3556777888999999999987754 345666665

; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=97.44  E-value=0.00023  Score=59.50  Aligned_cols=88  Identities=10%  Similarity=0.073  Sum_probs=52.0

Q ss_pred             HHHHHHHHHHHhCCCcE-EEEcCCcccc--ccchhccC-CchHHHHHHH--hcC-------ceeecCCCCHHHHHHHHHH
Q 021350          172 QDLEKILEICASKKIPM-VVANPDYVTV--EARALRVM-PGTLASKFEK--LGG-------EVRWMGKPDKIIYKSAMAM  238 (313)
Q Consensus       172 ~~~~~~l~~l~~~g~~~-i~tn~d~~~~--~~~~~~~~-~g~~~~~~~~--~~~-------~~~~~gKP~~~~~~~~~~~  238 (313)
                      +++++.+..|+++|..+ ++|.+-+.+.  ....+-+. ...+++.+..  .|.       +++.-|-.++.++....+ 
T Consensus        91 ~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~lrk-  169 (227)
T KOG1615|consen   91 PGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALLRK-  169 (227)
T ss_pred             CCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHHHh-
Confidence            68899999999999988 5555443221  11111111 1122332221  111       233333333348888777 


Q ss_pred             hCCCCCcEEEEcCCchhhHHHHHH
Q 021350          239 VGVDACDSIAVGDSLHHDIKGANA  262 (313)
Q Consensus       239 lgv~~~~~v~IGDs~~~Di~~a~~  262 (313)
                       +++-+.++||||.- ||+++..-
T Consensus       170 -~~~~~~~~mvGDGa-tDlea~~p  191 (227)
T KOG1615|consen  170 -NYNYKTIVMVGDGA-TDLEAMPP  191 (227)
T ss_pred             -CCChheeEEecCCc-cccccCCc
Confidence             88889999999996 99987654

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=97.40  E-value=0.00068  Score=67.27  Aligned_cols=90  Identities=14%  Similarity=0.073  Sum_probs=60.5

Q ss_pred             CCCCHHHHHHHHHHHHhCC-CcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCC
Q 021350          167 RPMSLQDLEKILEICASKK-IPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDAC  244 (313)
Q Consensus       167 ~~~~~~~~~~~l~~l~~~g-~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~  244 (313)
                      ....++++.++++.|+++| +++ ++|++...            ......+.++....+. .-.|.-=..+.++++..++
T Consensus       382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~------------~a~~i~~~lgi~~~f~-~~~p~~K~~~v~~l~~~~~  448 (556)
T TIGR01525       382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRS------------AAEAVAAELGIDEVHA-ELLPEDKLAIVKELQEEGG  448 (556)
T ss_pred             cccchHhHHHHHHHHHHcCCCeEEEEeCCCHH------------HHHHHHHHhCCCeeec-cCCHHHHHHHHHHHHHcCC
Confidence            3446799999999999999 888 78875542            1222334444432221 1122222345555555778


Q ss_pred             cEEEEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350          245 DSIAVGDSLHHDIKGANAAGIQSVFIIGG  273 (313)
Q Consensus       245 ~~v~IGDs~~~Di~~a~~aG~~~i~V~~G  273 (313)
                      +|+||||+. +|+.++++||   +.|.+|
T Consensus       449 ~v~~vGDg~-nD~~al~~A~---vgia~g  473 (556)
T TIGR01525       449 VVAMVGDGI-NDAPALAAAD---VGIAMG  473 (556)
T ss_pred             EEEEEECCh-hHHHHHhhCC---EeEEeC
Confidence            999999996 9999999999   677777

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=97.37  E-value=0.00082  Score=66.36  Aligned_cols=90  Identities=16%  Similarity=0.073  Sum_probs=59.6

Q ss_pred             CCCHHHHHHHHHHHHhCCC-cE-EEEcCCccccccchhccCCchHHHHHHHhcCceeec-CCCCHHHHHHHHHHhCCCCC
Q 021350          168 PMSLQDLEKILEICASKKI-PM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWM-GKPDKIIYKSAMAMVGVDAC  244 (313)
Q Consensus       168 ~~~~~~~~~~l~~l~~~g~-~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-gKP~~~~~~~~~~~lgv~~~  244 (313)
                      ...++++.++++.|+++|+ ++ ++|++.....            ....+.++....+. -.|.  --..+.++++-..+
T Consensus       361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a------------~~i~~~lgi~~~f~~~~p~--~K~~~i~~l~~~~~  426 (536)
T TIGR01512       361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVA------------ERVARELGIDEVHAELLPE--DKLEIVKELREKYG  426 (536)
T ss_pred             ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHH------------HHHHHHcCChhhhhccCcH--HHHHHHHHHHhcCC
Confidence            3457999999999999999 88 7787554221            12222233221111 1232  22446666666679


Q ss_pred             cEEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          245 DSIAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       245 ~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      +++||||+. +|+.+++++|   +.|..|..
T Consensus       427 ~v~~vGDg~-nD~~al~~A~---vgia~g~~  453 (536)
T TIGR01512       427 PVAMVGDGI-NDAPALAAAD---VGIAMGAS  453 (536)
T ss_pred             EEEEEeCCH-HHHHHHHhCC---EEEEeCCC
Confidence            999999996 9999999999   46777743

.

>TIGR01675 plant-AP plant acid phosphatase

Probab=97.34  E-value=0.00054  Score=59.69  Aligned_cols=59  Identities=24%  Similarity=0.450  Sum_probs=47.8

Q ss_pred             CccEEEEeccceeecCC---------------------------ccCccHHHHHHHHHHCCCcEEEEeCCCCCc---hHH
Q 021350           29 RFKAWLLDQFGVLHDGK---------------------------KPYPGAISTLEMLATTGAKMVVISNSSRRA---STT   78 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~---------------------------~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~---~~~   78 (313)
                      ..++++||+|.|+++..                           +++|++.++++.++++|+.++++|  +|+.   +..
T Consensus        76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lT--GR~e~~r~~T  153 (229)
T TIGR01675        76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLS--GRWEELRNAT  153 (229)
T ss_pred             CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEc--CCChHHHHHH
Confidence            67899999999987621                           357889999999999999999999  5543   235


Q ss_pred             HHHHHhCCCCC
Q 021350           79 IDKLKSLGFDP   89 (313)
Q Consensus        79 ~~~l~~~G~~~   89 (313)
                      .+.|.+.|++.
T Consensus       154 ~~nL~~~G~~~  164 (229)
T TIGR01675       154 LDNLINAGFTG  164 (229)
T ss_pred             HHHHHHcCCCC
Confidence            78888899874

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=97.21  E-value=0.00031  Score=61.56  Aligned_cols=61  Identities=21%  Similarity=0.297  Sum_probs=49.6

Q ss_pred             CccEEEEeccceeecC---------------------------CccCccHHHHHHHHHHCCCcEEEEeCCCCC-chHHHH
Q 021350           29 RFKAWLLDQFGVLHDG---------------------------KKPYPGAISTLEMLATTGAKMVVISNSSRR-ASTTID   80 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~---------------------------~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~-~~~~~~   80 (313)
                      +..+|+||+|+|+++.                           ...+|++.++++.++++|..++++||.... .+...+
T Consensus        71 ~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~  150 (229)
T PF03767_consen   71 KPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATEK  150 (229)
T ss_dssp             SEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHH
T ss_pred             CCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHH
Confidence            6889999999997651                           246899999999999999999999974433 345678


Q ss_pred             HHHhCCCCC
Q 021350           81 KLKSLGFDP   89 (313)
Q Consensus        81 ~l~~~G~~~   89 (313)
                      .|++.|+..
T Consensus       151 nL~~~G~~~  159 (229)
T PF03767_consen  151 NLKKAGFPG  159 (229)
T ss_dssp             HHHHHTTST
T ss_pred             HHHHcCCCc
Confidence            889999864

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=97.13  E-value=0.001  Score=59.19  Aligned_cols=61  Identities=18%  Similarity=0.322  Sum_probs=47.3

Q ss_pred             CccEEEEeccceeec----------------------------CCccCccHHHHHHHHHHCCCcEEEEeCCCCCc-hHHH
Q 021350           29 RFKAWLLDQFGVLHD----------------------------GKKPYPGAISTLEMLATTGAKMVVISNSSRRA-STTI   79 (313)
Q Consensus        29 ~~k~iifDlDGTL~~----------------------------~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~-~~~~   79 (313)
                      ..++++||+|+|+++                            ..+++|++.++.+.+++.|++++++||..... +...
T Consensus       100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~  179 (275)
T TIGR01680       100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTE  179 (275)
T ss_pred             CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH
Confidence            458999999999873                            12357889999999999999999999543222 3457


Q ss_pred             HHHHhCCCCC
Q 021350           80 DKLKSLGFDP   89 (313)
Q Consensus        80 ~~l~~~G~~~   89 (313)
                      +.|++.|++.
T Consensus       180 ~NL~kaGy~~  189 (275)
T TIGR01680       180 ANLKKAGYHT  189 (275)
T ss_pred             HHHHHcCCCC
Confidence            7788889974

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=97.08  E-value=0.00099  Score=54.50  Aligned_cols=41  Identities=22%  Similarity=0.325  Sum_probs=35.7

Q ss_pred             EEEEeccceeecCC------------ccCccHHHHHHHHHHCCCcEEEEeCCCCC
Q 021350           32 AWLLDQFGVLHDGK------------KPYPGAISTLEMLATTGAKMVVISNSSRR   74 (313)
Q Consensus        32 ~iifDlDGTL~~~~------------~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~   74 (313)
                      .|++|+||||..|+            ...+++.+.++++.++|++++++|  +|+
T Consensus         1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlT--aRp   53 (157)
T PF08235_consen    1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLT--ARP   53 (157)
T ss_pred             CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEEC--cCc
Confidence            38999999999974            356899999999999999999999  555

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=97.07  E-value=0.047  Score=48.74  Aligned_cols=58  Identities=24%  Similarity=0.233  Sum_probs=43.3

Q ss_pred             CccEEEEeccceeecC------CccCccHHHHHHHHHHCC-CcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           29 RFKAWLLDQFGVLHDG------KKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~------~~~~~~a~~~l~~l~~~g-~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      +-.++++|.||||..-      ..+.++..+.|+.|.+.. ..+.++|  +|+.+++.+.+.-.|+.
T Consensus        17 ~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiS--GR~~~~l~~~~~v~~i~   81 (266)
T COG1877          17 RKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIIS--GRSLAELERLFGVPGIG   81 (266)
T ss_pred             cceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEe--CCCHHHHHHhcCCCCcc
Confidence            4589999999999882      223456788888888764 3577777  88888888877755553

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=97.02  E-value=0.003  Score=62.80  Aligned_cols=89  Identities=17%  Similarity=0.136  Sum_probs=56.9

Q ss_pred             CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      ..+++..++++.|+++|+++ ++|++....            .....+.++.....--+|.  --..+.+++.-++++|+
T Consensus       405 ~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~------------a~~ia~~lgi~~~~~~~p~--~K~~~v~~l~~~~~~v~  470 (562)
T TIGR01511       405 QLRPEAKEVIQALKRRGIEPVMLTGDNRKT------------AKAVAKELGINVRAEVLPD--DKAALIKELQEKGRVVA  470 (562)
T ss_pred             cccHHHHHHHHHHHHcCCeEEEEcCCCHHH------------HHHHHHHcCCcEEccCChH--HHHHHHHHHHHcCCEEE
Confidence            45789999999999999998 777754421            1122223333211111232  22334444544779999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      ||||+. +|+.+++++|+   .|..|..
T Consensus       471 ~VGDg~-nD~~al~~A~v---gia~g~g  494 (562)
T TIGR01511       471 MVGDGI-NDAPALAQADV---GIAIGAG  494 (562)
T ss_pred             EEeCCC-ccHHHHhhCCE---EEEeCCc
Confidence            999997 99999999995   4555543

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=96.97  E-value=0.011  Score=61.83  Aligned_cols=60  Identities=18%  Similarity=0.375  Sum_probs=45.3

Q ss_pred             CccEEEEecc---------ceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCc
Q 021350           29 RFKAWLLDQF---------GVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (313)
Q Consensus        29 ~~k~iifDlD---------GTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~   90 (313)
                      .++.+.|=.+         |.+.-.+++-|++.++++.|++.|+++.++|  +..........+++|+...
T Consensus       502 G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miT--GD~~~tA~~ia~~~Gi~~~  570 (884)
T TIGR01522       502 GLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMIT--GDSQETAVSIARRLGMPSK  570 (884)
T ss_pred             CCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEEC--CCCHHHHHHHHHHcCCCCC
Confidence            4566665433         4555577888999999999999999999999  5556666666788888643

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=96.93  E-value=0.022  Score=44.75  Aligned_cols=56  Identities=13%  Similarity=0.158  Sum_probs=43.2

Q ss_pred             cEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350           31 KAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (313)
Q Consensus        31 k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~   89 (313)
                      +...-+.++|+..+.++++.+.+.|+.|.+. +.++++|  +-+.-.+.+.++-.|++.
T Consensus        15 d~~~~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IAS--gDr~gsl~~lae~~gi~~   70 (152)
T COG4087          15 DSKAGKVLYTIATGGKLFSEVSETIQELHDM-VDIYIAS--GDRKGSLVQLAEFVGIPV   70 (152)
T ss_pred             eeecceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEec--CCcchHHHHHHHHcCCce
Confidence            4566788999999999999999999999999 8888877  433445555555566653

>PRK10671 copA copper exporting ATPase; Provisional

Probab=96.75  E-value=0.0083  Score=62.49  Aligned_cols=92  Identities=13%  Similarity=0.004  Sum_probs=62.6

Q ss_pred             CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      ..+++..+.++.+++.|+++ ++|++....            .....+.++..... ..-.|+--..++++++..+++++
T Consensus       650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~------------a~~ia~~lgi~~~~-~~~~p~~K~~~i~~l~~~~~~v~  716 (834)
T PRK10671        650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTT------------ANAIAKEAGIDEVI-AGVLPDGKAEAIKRLQSQGRQVA  716 (834)
T ss_pred             cchhhHHHHHHHHHHCCCeEEEEcCCCHHH------------HHHHHHHcCCCEEE-eCCCHHHHHHHHHHHhhcCCEEE
Confidence            34688899999999999988 677644411            11223334443322 22344455667778888889999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIHAT  277 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~  277 (313)
                      ||||+. ||+.+++++|+   .|..|..++
T Consensus       717 ~vGDg~-nD~~al~~Agv---gia~g~g~~  742 (834)
T PRK10671        717 MVGDGI-NDAPALAQADV---GIAMGGGSD  742 (834)
T ss_pred             EEeCCH-HHHHHHHhCCe---eEEecCCCH
Confidence            999996 99999999998   445554433

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=96.72  E-value=0.013  Score=61.49  Aligned_cols=50  Identities=18%  Similarity=0.339  Sum_probs=38.2

Q ss_pred             eeecCCCCHHHHHHHHHHhCCCCCcEEE-EcCCchhhHHHHHHcCCcEEEEcCC
Q 021350          221 VRWMGKPDKIIYKSAMAMVGVDACDSIA-VGDSLHHDIKGANAAGIQSVFIIGG  273 (313)
Q Consensus       221 ~~~~gKP~~~~~~~~~~~lgv~~~~~v~-IGDs~~~Di~~a~~aG~~~i~V~~G  273 (313)
                      |...+|..  ++.+++.++|++++++++ +||+-.+|.+.. -.|.+.-.|+.|
T Consensus       952 P~~ASKgq--AlRyL~~rwgi~l~~v~VfaGdSGntD~e~L-l~G~~~tvi~~g 1002 (1050)
T TIGR02468       952 PLLASRSQ--ALRYLFVRWGIELANMAVFVGESGDTDYEGL-LGGLHKTVILKG 1002 (1050)
T ss_pred             eCCCCHHH--HHHHHHHHcCCChHHeEEEeccCCCCCHHHH-hCCceeEEEEec
Confidence            44556776  999999999999999955 999973497766 356666666666

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=96.65  E-value=0.027  Score=49.34  Aligned_cols=49  Identities=27%  Similarity=0.201  Sum_probs=37.7

Q ss_pred             cCCCCHHHHHHHHHH---hCCCCCcEEEEcCCchhhHHHHHHcCC-cEEEEcCCCC
Q 021350          224 MGKPDKIIYKSAMAM---VGVDACDSIAVGDSLHHDIKGANAAGI-QSVFIIGGIH  275 (313)
Q Consensus       224 ~gKP~~~~~~~~~~~---lgv~~~~~v~IGDs~~~Di~~a~~aG~-~~i~V~~G~~  275 (313)
                      +-|..  +++...+.   -|++.+++++|||+. +|+=++.+.+- +.++.+.|+.
T Consensus       149 mCK~~--il~~~~~~~~~~g~~~~rviYiGDG~-nD~Cp~~~L~~~D~v~~R~~~~  201 (234)
T PF06888_consen  149 MCKGK--ILERLLQEQAQRGVPYDRVIYIGDGR-NDFCPALRLRPRDVVFPRKGYP  201 (234)
T ss_pred             cchHH--HHHHHHHHHhhcCCCcceEEEECCCC-CCcCcccccCCCCEEecCCCCh
Confidence            44554  66666655   478899999999995 99999998774 6788888865

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=96.56  E-value=0.013  Score=48.77  Aligned_cols=38  Identities=16%  Similarity=0.139  Sum_probs=27.6

Q ss_pred             eeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCC
Q 021350          221 VRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGI  265 (313)
Q Consensus       221 ~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~  265 (313)
                      ..+.-||.  ......    -+++.++|+||+. +|+.+|+....
T Consensus       143 ~fG~dK~~--vI~~l~----e~~e~~fy~GDsv-sDlsaaklsDl  180 (220)
T COG4359         143 QFGHDKSS--VIHELS----EPNESIFYCGDSV-SDLSAAKLSDL  180 (220)
T ss_pred             ccCCCcch--hHHHhh----cCCceEEEecCCc-ccccHhhhhhh
Confidence            34455666  554444    4677899999998 99999997763

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=96.40  E-value=0.0084  Score=51.82  Aligned_cols=99  Identities=13%  Similarity=-0.032  Sum_probs=51.3

Q ss_pred             CHHHHHHHHH-HHHhCCCcE-EEEcCCccccccc--hhc-cC-CchHHHHHHHhcCceeecCCCCHH--HHHHHHHHhCC
Q 021350          170 SLQDLEKILE-ICASKKIPM-VVANPDYVTVEAR--ALR-VM-PGTLASKFEKLGGEVRWMGKPDKI--IYKSAMAMVGV  241 (313)
Q Consensus       170 ~~~~~~~~l~-~l~~~g~~~-i~tn~d~~~~~~~--~~~-~~-~g~~~~~~~~~~~~~~~~gKP~~~--~~~~~~~~lgv  241 (313)
                      .++++.+.++ .++++|..+ ++||....+...-  ..- .. ...+..-++.-.+ ....|.+.-.  =...+.+.++.
T Consensus        95 l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~le~~~g-g~~~g~~c~g~~Kv~rl~~~~~~  173 (210)
T TIGR01545        95 AFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQIERGNG-GWVLPLRCLGHEKVAQLEQKIGS  173 (210)
T ss_pred             CCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEEeEEeCC-ceEcCccCCChHHHHHHHHHhCC
Confidence            3678888885 677789888 7888654332110  000 00 0000000110000 1112221110  12223334466


Q ss_pred             CCCcEEEEcCCchhhHHHHHHcCCcEEEEc
Q 021350          242 DACDSIAVGDSLHHDIKGANAAGIQSVFII  271 (313)
Q Consensus       242 ~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~  271 (313)
                      +.+.+.+-|||. +|+.+...+|- .+.|.
T Consensus       174 ~~~~~~aYsDS~-~D~pmL~~a~~-~~~Vn  201 (210)
T TIGR01545       174 PLKLYSGYSDSK-QDNPLLAFCEH-RWRVS  201 (210)
T ss_pred             ChhheEEecCCc-ccHHHHHhCCC-cEEEC
Confidence            778899999996 99999999994 44443

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3

Probab=96.32  E-value=0.025  Score=49.63  Aligned_cols=43  Identities=9%  Similarity=-0.030  Sum_probs=27.5

Q ss_pred             HHHHHHHHhCCC---CCcEEEEcCCchhhHHHHHHcCCc-----EEEEcCCC
Q 021350          231 IYKSAMAMVGVD---ACDSIAVGDSLHHDIKGANAAGIQ-----SVFIIGGI  274 (313)
Q Consensus       231 ~~~~~~~~lgv~---~~~~v~IGDs~~~Di~~a~~aG~~-----~i~V~~G~  274 (313)
                      +...++++++..   ++-++++||+. +|-.+-+.+.-.     ++.|.++.
T Consensus       169 av~~ll~~~~~~~~~~~~~l~~GDD~-tDE~~f~~~~~~~~~~~~i~V~~~~  219 (235)
T PF02358_consen  169 AVRRLLEELPFAGPKPDFVLYIGDDR-TDEDAFRALRELEEGGFGIKVGSVS  219 (235)
T ss_dssp             HHHHHHTTS---------EEEEESSH-HHHHHHHTTTTS----EEEEES---
T ss_pred             HHHHHHHhcCccccccceeEEecCCC-CCHHHHHHHHhcccCCCCeEEEeec
Confidence            777888877765   88999999995 999999987643     56666653

1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=96.24  E-value=0.14  Score=52.98  Aligned_cols=60  Identities=17%  Similarity=0.194  Sum_probs=45.0

Q ss_pred             ccEEEEeccceeecCC---------ccCccHHHHHHHHHH-CCCcEEEEeCCCCCchHHHHHHHhCCCCCcc
Q 021350           30 FKAWLLDQFGVLHDGK---------KPYPGAISTLEMLAT-TGAKMVVISNSSRRASTTIDKLKSLGFDPSL   91 (313)
Q Consensus        30 ~k~iifDlDGTL~~~~---------~~~~~a~~~l~~l~~-~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~   91 (313)
                      -.+++||.||||..-.         .+.|+..+.|..|.+ .+..++++|  ||..+++.+.+...++....
T Consensus       507 ~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvS--GR~~~~L~~~~~~~~l~l~a  576 (797)
T PLN03063        507 NRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLS--RSGKDILDKNFGEYNIWLAA  576 (797)
T ss_pred             CeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEe--CCCHHHHHHHhCCCCCcEEE
Confidence            4789999999998632         134567788888886 467889999  88888888888765554333

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=95.99  E-value=0.044  Score=45.42  Aligned_cols=34  Identities=32%  Similarity=0.408  Sum_probs=28.0

Q ss_pred             CcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          244 CDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       244 ~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      .--++-||| .+||.+|+.+|.+.|.+++-..+..
T Consensus       185 ~~~IhYGDS-D~Di~AAkeaG~RgIRilRAaNSTy  218 (237)
T COG3700         185 NIRIHYGDS-DNDITAAKEAGARGIRILRAANSTY  218 (237)
T ss_pred             CceEEecCC-chhhhHHHhcCccceeEEecCCccC
Confidence            445789999 6999999999999999988544443

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=95.98  E-value=0.017  Score=50.10  Aligned_cols=66  Identities=33%  Similarity=0.433  Sum_probs=53.4

Q ss_pred             CccEEEEeccceeecC---------------------------CccCccHHHHHHHHHHCCCcEEEEeCCCCCc--hHHH
Q 021350           29 RFKAWLLDQFGVLHDG---------------------------KKPYPGAISTLEMLATTGAKMVVISNSSRRA--STTI   79 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~---------------------------~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~--~~~~   79 (313)
                      +-++|+.|+|=|+++.                           .+++|||.++++...++|..++++||..+..  ....
T Consensus        78 K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~  157 (274)
T COG2503          78 KKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTI  157 (274)
T ss_pred             CCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhH
Confidence            4569999999998772                           2378999999999999999999999876554  3568


Q ss_pred             HHHHhCCCCCccccc
Q 021350           80 DKLKSLGFDPSLFAG   94 (313)
Q Consensus        80 ~~l~~~G~~~~~~~~   94 (313)
                      +.|.+.|++....+.
T Consensus       158 ~nLk~~g~~~~~~~~  172 (274)
T COG2503         158 ENLKSEGLPQVLESH  172 (274)
T ss_pred             HHHHHcCcccccccc
Confidence            889999998655333

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=95.96  E-value=0.081  Score=55.75  Aligned_cols=44  Identities=18%  Similarity=0.307  Sum_probs=37.0

Q ss_pred             CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (313)
Q Consensus        44 ~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~   89 (313)
                      .+++-+++.++|++|++.|+++.++|  +...+......+++|+..
T Consensus       535 ~Dplr~~v~e~I~~l~~aGI~v~miT--GD~~~tA~~ia~~~gi~~  578 (917)
T TIGR01116       535 LDPPRPEVADAIEKCRTAGIRVIMIT--GDNKETAEAICRRIGIFS  578 (917)
T ss_pred             eCCCchhHHHHHHHHHHCCCEEEEec--CCCHHHHHHHHHHcCCCC
Confidence            56778899999999999999999999  656667777778888863

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=95.83  E-value=0.082  Score=47.02  Aligned_cols=47  Identities=13%  Similarity=0.095  Sum_probs=37.2

Q ss_pred             HHHHHHHHHhCCCCCcEEEEcCCchhhHHHH----HHcCCcEEEEcCCCCCC
Q 021350          230 IIYKSAMAMVGVDACDSIAVGDSLHHDIKGA----NAAGIQSVFIIGGIHAT  277 (313)
Q Consensus       230 ~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a----~~aG~~~i~V~~G~~~~  277 (313)
                      .++..++.+.|..|+.+++|.|+. ..++..    +..|+..+++.+.....
T Consensus       165 ~~L~~fL~~~~~~pk~IIfIDD~~-~nl~sv~~a~k~~~I~f~G~~Yt~~~~  215 (252)
T PF11019_consen  165 EVLKYFLDKINQSPKKIIFIDDNK-ENLKSVEKACKKSGIDFIGFHYTGAEE  215 (252)
T ss_pred             HHHHHHHHHcCCCCCeEEEEeCCH-HHHHHHHHHHhhCCCcEEEEEEcchhh
Confidence            489999999999999999999996 666543    34588888888754433

The function is not known.

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=95.38  E-value=0.031  Score=49.79  Aligned_cols=69  Identities=19%  Similarity=0.200  Sum_probs=52.0

Q ss_pred             CccEEEEeccceeecCCc----cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHH
Q 021350           29 RFKAWLLDQFGVLHDGKK----PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~----~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~  100 (313)
                      ....|+||+|.||+.+..    .-|...+.+..|++.|.-+++=|.++  .+=+...+++++++... +-|++.+.
T Consensus       121 ~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~--~eHV~~sl~~~~L~~~F-d~ii~~G~  193 (297)
T PF05152_consen  121 PPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQGCVLVLWSYGN--REHVRHSLKELKLEGYF-DIIICGGN  193 (297)
T ss_pred             CCcEEEEECCCcccccCCccccCChHHHHHHHHHHHcCCEEEEecCCC--HHHHHHHHHHhCCcccc-EEEEeCCc
Confidence            567999999999997653    23678899999999998888777444  45566677788888544 77776553

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=95.33  E-value=0.046  Score=48.12  Aligned_cols=86  Identities=12%  Similarity=0.049  Sum_probs=55.3

Q ss_pred             CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCce----eecCCC--CHHHHHHHHHHhCC
Q 021350          169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEV----RWMGKP--DKIIYKSAMAMVGV  241 (313)
Q Consensus       169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~gKP--~~~~~~~~~~~lgv  241 (313)
                      -.+++..++++.|+++|+++ ++||.......          +...+..++...    ..++--  ....+..+++++++
T Consensus        24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~----------~~~~L~~~gl~~~~~~~Ii~s~~~~~~~l~~~~~~~~~   93 (242)
T TIGR01459        24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFS----------LHKTLKSLGINADLPEMIISSGEIAVQMILESKKRFDI   93 (242)
T ss_pred             ccCccHHHHHHHHHHCCCEEEEEeCCCCChHH----------HHHHHHHCCCCccccceEEccHHHHHHHHHhhhhhccC
Confidence            34799999999999999998 88996542111          112233333211    111110  11356666678889


Q ss_pred             CCCcEEEEcCCchhhHHHHHHcCC
Q 021350          242 DACDSIAVGDSLHHDIKGANAAGI  265 (313)
Q Consensus       242 ~~~~~v~IGDs~~~Di~~a~~aG~  265 (313)
                      +++++++|||+. .|++....+|.
T Consensus        94 ~~~~~~~vGd~~-~d~~~~~~~~~  116 (242)
T TIGR01459        94 RNGIIYLLGHLE-NDIINLMQCYT  116 (242)
T ss_pred             CCceEEEeCCcc-cchhhhcCCCc
Confidence            999999999995 88887765554

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=95.24  E-value=0.26  Score=51.55  Aligned_cols=60  Identities=15%  Similarity=0.143  Sum_probs=45.0

Q ss_pred             ccEEEEeccceeecCC---------------ccCccHHHHHHHHHH-CCCcEEEEeCCCCCchHHHHHHHhCCCCCcc
Q 021350           30 FKAWLLDQFGVLHDGK---------------KPYPGAISTLEMLAT-TGAKMVVISNSSRRASTTIDKLKSLGFDPSL   91 (313)
Q Consensus        30 ~k~iifDlDGTL~~~~---------------~~~~~a~~~l~~l~~-~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~   91 (313)
                      -.+++||.||||..-.               .+.|+..+.|+.|.+ .+..++++|  ||..+++.+.+...++....
T Consensus       591 ~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVS--GR~~~~Le~~fg~~~L~LaA  666 (934)
T PLN03064        591 NRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLS--GSDRSVLDENFGEFDMWLAA  666 (934)
T ss_pred             ceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEe--CCCHHHHHHHhCCCCceEEe
Confidence            4689999999998621               133567788888886 467899999  88889988888766655434

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=95.11  E-value=0.011  Score=48.37  Aligned_cols=52  Identities=27%  Similarity=0.336  Sum_probs=33.4

Q ss_pred             cEEEEeccceeecCCc--------------------cCccHHHHHHHHHHCCCcEEEEeCCCCCc-hHHHHHHH
Q 021350           31 KAWLLDQFGVLHDGKK--------------------PYPGAISTLEMLATTGAKMVVISNSSRRA-STTIDKLK   83 (313)
Q Consensus        31 k~iifDlDGTL~~~~~--------------------~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~-~~~~~~l~   83 (313)
                      |+++||+||||+++..                    .-|++.++|+.+.+. ..+++.|.+.+.. +.+.+.+.
T Consensus         1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ld   73 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALD   73 (159)
T ss_dssp             EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHT
T ss_pred             CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhh
Confidence            5899999999998442                    248899999988544 8888888554322 34444443

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=94.94  E-value=0.11  Score=53.37  Aligned_cols=88  Identities=18%  Similarity=0.110  Sum_probs=54.3

Q ss_pred             CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      -..++..++++.|++.|+++ ++|++....            .......+|.....--.|.  -=..+.+++. ...+++
T Consensus       568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~------------a~~ia~~lgi~~~~~~~p~--~K~~~v~~l~-~~~~v~  632 (741)
T PRK11033        568 TLRADARQAISELKALGIKGVMLTGDNPRA------------AAAIAGELGIDFRAGLLPE--DKVKAVTELN-QHAPLA  632 (741)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHH------------HHHHHHHcCCCeecCCCHH--HHHHHHHHHh-cCCCEE
Confidence            34689999999999999998 667644311            1122233443321111232  2222444444 346899


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      ||||+. ||..++++++   |.|..|..
T Consensus       633 mvGDgi-NDapAl~~A~---vgia~g~~  656 (741)
T PRK11033        633 MVGDGI-NDAPAMKAAS---IGIAMGSG  656 (741)
T ss_pred             EEECCH-HhHHHHHhCC---eeEEecCC
Confidence            999997 9999999999   55555543

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=94.89  E-value=0.024  Score=47.47  Aligned_cols=29  Identities=28%  Similarity=0.342  Sum_probs=23.0

Q ss_pred             HHHHH---HHHhCCCCCcEEEEcCCchhhHHHHH
Q 021350          231 IYKSA---MAMVGVDACDSIAVGDSLHHDIKGAN  261 (313)
Q Consensus       231 ~~~~~---~~~lgv~~~~~v~IGDs~~~Di~~a~  261 (313)
                      .+..+   ... +.+..++++|||+. +|+.+++
T Consensus       161 ~l~~~~~~~~~-~~~~~~~~~iGDs~-~D~~~lr  192 (192)
T PF12710_consen  161 ALKELYIRDEE-DIDPDRVIAIGDSI-NDLPMLR  192 (192)
T ss_dssp             HHHHHHHHHHH-THTCCEEEEEESSG-GGHHHHH
T ss_pred             HHHHHHHHhhc-CCCCCeEEEEECCH-HHHHHhC
Confidence            44444   444 88999999999996 9999875

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=94.87  E-value=0.91  Score=39.34  Aligned_cols=41  Identities=27%  Similarity=0.323  Sum_probs=31.0

Q ss_pred             HHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCC-cEEEEcC
Q 021350          230 IIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGI-QSVFIIG  272 (313)
Q Consensus       230 ~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~-~~i~V~~  272 (313)
                      .+++..++.-+.+.+ +++||||+ +|++|.+++.- .++.|.-
T Consensus       194 ~i~e~~~ele~~d~s-a~~VGDSI-tDv~ml~~~rgrGglAvaF  235 (315)
T COG4030         194 KIMEGYCELEGIDFS-AVVVGDSI-TDVKMLEAARGRGGLAVAF  235 (315)
T ss_pred             HHHHHHHhhcCCCcc-eeEecCcc-cchHHHHHhhccCceEEEe
Confidence            477777776676666 99999997 99999998744 3366655

>COG4996 Predicted phosphatase [General function prediction only]

Probab=94.77  E-value=0.064  Score=42.19  Aligned_cols=59  Identities=20%  Similarity=0.247  Sum_probs=39.8

Q ss_pred             cEEEEeccceeecCC-------------------------ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhC
Q 021350           31 KAWLLDQFGVLHDGK-------------------------KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSL   85 (313)
Q Consensus        31 k~iifDlDGTL~~~~-------------------------~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~   85 (313)
                      .+|+||+|||||+-.                         ++++...+++..++..|.-+-.+|=+  ...-..+.|+.+
T Consensus         1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN--~~~kA~~aLral   78 (164)
T COG4996           1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWN--FEDKAIKALRAL   78 (164)
T ss_pred             CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecC--chHHHHHHHHHh
Confidence            379999999999822                         25667778888888888776655511  123446667777


Q ss_pred             CCCCcc
Q 021350           86 GFDPSL   91 (313)
Q Consensus        86 G~~~~~   91 (313)
                      ++....
T Consensus        79 ~~~~yF   84 (164)
T COG4996          79 DLLQYF   84 (164)
T ss_pred             chhhhE
Confidence            776444

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=94.45  E-value=0.016  Score=55.71  Aligned_cols=44  Identities=18%  Similarity=0.315  Sum_probs=34.4

Q ss_pred             HHHHHHHhCCCCCcEEEEcCCchhhHHHHHHc-CCcEEEEcCCCC
Q 021350          232 YKSAMAMVGVDACDSIAVGDSLHHDIKGANAA-GIQSVFIIGGIH  275 (313)
Q Consensus       232 ~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~a-G~~~i~V~~G~~  275 (313)
                      ...+.+.+|..-.++++|||.+..||...+.. ||+|++|-....
T Consensus       284 ~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~ELe  328 (448)
T PF05761_consen  284 WDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPELE  328 (448)
T ss_dssp             HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TTHH
T ss_pred             HHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehhhh
Confidence            56777888999999999999999999998876 999999976433

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>TIGR01658 EYA-cons_domain eyes absent protein conserved domain

Probab=93.69  E-value=0.11  Score=45.24  Aligned_cols=50  Identities=22%  Similarity=0.120  Sum_probs=44.2

Q ss_pred             ecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          223 WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       223 ~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      .+||.+  .|+.+.+|+|-+....++|||.. .--.+|++.+++++-|.+...
T Consensus       212 kvGK~~--cFe~I~~Rfg~p~~~f~~IGDG~-eEe~aAk~l~wPFw~I~~h~D  261 (274)
T TIGR01658       212 KVGKLQ--CFKWIKERFGHPKVRFCAIGDGW-EECTAAQAMNWPFVKIDLHPD  261 (274)
T ss_pred             hcchHH--HHHHHHHHhCCCCceEEEeCCCh-hHHHHHHhcCCCeEEeecCCC
Confidence            477777  99999999998889999999995 778999999999999988544

This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=93.50  E-value=0.15  Score=42.54  Aligned_cols=21  Identities=14%  Similarity=0.273  Sum_probs=16.2

Q ss_pred             HHHHHHHHHHHhCCCcE-EEEc
Q 021350          172 QDLEKILEICASKKIPM-VVAN  192 (313)
Q Consensus       172 ~~~~~~l~~l~~~g~~~-i~tn  192 (313)
                      +++.+.++.+++.|..+ |+|.
T Consensus        92 ~~~~e~i~~~~~~~~~v~IvS~  113 (192)
T PF12710_consen   92 PDAMELIRELKDNGIKVVIVSG  113 (192)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEEE
T ss_pred             hhHHHHHHHHHHCCCEEEEECC
Confidence            56668888888899888 6665

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=93.47  E-value=0.13  Score=42.17  Aligned_cols=17  Identities=18%  Similarity=0.010  Sum_probs=13.6

Q ss_pred             CccEEEEeccceeecCC
Q 021350           29 RFKAWLLDQFGVLHDGK   45 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~   45 (313)
                      +-..+++|+|.||+++.
T Consensus         5 ~kl~LVLDLDeTLihs~   21 (156)
T TIGR02250         5 KKLHLVLDLDQTLIHTT   21 (156)
T ss_pred             CceEEEEeCCCCccccc
Confidence            45678999999998854

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=92.85  E-value=0.86  Score=45.41  Aligned_cols=100  Identities=18%  Similarity=0.180  Sum_probs=68.6

Q ss_pred             CccEEEEeccceeec----CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHH-HHH
Q 021350           29 RFKAWLLDQFGVLHD----GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE-LTH  103 (313)
Q Consensus        29 ~~k~iifDlDGTL~~----~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~-~~~  103 (313)
                      ....+.++.||++.-    ..++.|++.+++++|++.|+++.++|+.  ........++++|++  .+.++..... ...
T Consensus       384 g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd--~~~~a~~ia~~lgi~--~~~~~~p~~K~~~v  459 (562)
T TIGR01511       384 GSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGD--NRKTAKAVAKELGIN--VRAEVLPDDKAALI  459 (562)
T ss_pred             CCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCC--CHHHHHHHHHHcCCc--EEccCChHHHHHHH
Confidence            456788999998754    5678899999999999999999999954  345566667788986  2233322211 122


Q ss_pred             HHHHhcCchhhhhcCCeEEEeecCcccchhhccCCcc
Q 021350          104 QYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLK  140 (313)
Q Consensus       104 ~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~  140 (313)
                      +.+.+.        +.++.+++-+.++...++..++-
T Consensus       460 ~~l~~~--------~~~v~~VGDg~nD~~al~~A~vg  488 (562)
T TIGR01511       460 KELQEK--------GRVVAMVGDGINDAPALAQADVG  488 (562)
T ss_pred             HHHHHc--------CCEEEEEeCCCccHHHHhhCCEE
Confidence            233221        56788888887777777776653

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=92.34  E-value=0.41  Score=45.49  Aligned_cols=47  Identities=26%  Similarity=0.390  Sum_probs=42.0

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIG  272 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~  272 (313)
                      |-+-..|..+++.-++++...+++||+...|+.++++.|+.|.+--+
T Consensus       157 KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tlf~~s  203 (635)
T COG5610         157 KNSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTLFYIS  203 (635)
T ss_pred             cccchHHHHHHhhcCCChhheEEecCchhhhhcCccccchhHHHHHH
Confidence            55556899999999999999999999999999999999998887633

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=92.31  E-value=0.25  Score=41.80  Aligned_cols=53  Identities=21%  Similarity=0.370  Sum_probs=41.7

Q ss_pred             CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (313)
Q Consensus        44 ~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~   99 (313)
                      ..+++|++.++|++|+++|+++.++||+.  ...+...++.+|+.... +.++++.
T Consensus        90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~--~~~~~~~l~~~gl~~~f-d~i~~s~  142 (198)
T TIGR01428        90 RLPPHPDVPAGLRALKERGYRLAILSNGS--PAMLKSLVKHAGLDDPF-DAVLSAD  142 (198)
T ss_pred             cCCCCCCHHHHHHHHHHCCCeEEEEeCCC--HHHHHHHHHHCCChhhh-heeEehh
Confidence            34678999999999999999999999865  45566777888986544 6666654

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=92.29  E-value=1  Score=44.81  Aligned_cols=100  Identities=18%  Similarity=0.175  Sum_probs=68.8

Q ss_pred             CccEEEEeccceeec----CCccCccHHHHHHHHHHCC-CcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHH-H
Q 021350           29 RFKAWLLDQFGVLHD----GKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL-T  102 (313)
Q Consensus        29 ~~k~iifDlDGTL~~----~~~~~~~a~~~l~~l~~~g-~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~-~  102 (313)
                      .+..+.+..||++.-    ..++.|++.+.+++|++.| +++.++||.  +.......++++|++... ..+...... .
T Consensus       363 g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd--~~~~a~~i~~~lgi~~~f-~~~~p~~K~~~  439 (556)
T TIGR01525       363 GKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGD--NRSAAEAVAAELGIDEVH-AELLPEDKLAI  439 (556)
T ss_pred             CcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCC--CHHHHHHHHHHhCCCeee-ccCCHHHHHHH
Confidence            457788899997655    5678899999999999999 999999954  455666777888996444 443222111 2


Q ss_pred             HHHHHhcCchhhhhcCCeEEEeecCcccchhhccCCc
Q 021350          103 HQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGL  139 (313)
Q Consensus       103 ~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~  139 (313)
                      .+.+.+ .       +.++.+++-+.++...++..|+
T Consensus       440 v~~l~~-~-------~~~v~~vGDg~nD~~al~~A~v  468 (556)
T TIGR01525       440 VKELQE-E-------GGVVAMVGDGINDAPALAAADV  468 (556)
T ss_pred             HHHHHH-c-------CCEEEEEECChhHHHHHhhCCE
Confidence            222222 1       4677788877777666766654

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=91.80  E-value=0.99  Score=43.34  Aligned_cols=38  Identities=5%  Similarity=0.001  Sum_probs=32.5

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcC
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAG  264 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG  264 (313)
                      -|..+-+..++++|++..+.+++|-|++ ..-+--++.+
T Consensus       310 ~~K~eNirkIAkklNlg~dSmvFiDD~p-~ErE~vk~~~  347 (574)
T COG3882         310 DPKAENIRKIAKKLNLGLDSMVFIDDNP-AERELVKREL  347 (574)
T ss_pred             CcchhhHHHHHHHhCCCccceEEecCCH-HHHHHHHhcC
Confidence            4666699999999999999999999997 7777777666

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=91.77  E-value=3  Score=42.68  Aligned_cols=110  Identities=23%  Similarity=0.239  Sum_probs=76.8

Q ss_pred             EEEEeccceeec----CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHH-HHHHH
Q 021350           32 AWLLDQFGVLHD----GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL-THQYL  106 (313)
Q Consensus        32 ~iifDlDGTL~~----~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~-~~~~l  106 (313)
                      .+++=.||.+.-    ++++=|++.+++++|++.|++++++|  |-.........+++|++... .++.....+ ..+.+
T Consensus       519 ~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLT--GDn~~~A~~iA~~lGId~v~-AellPedK~~~V~~l  595 (713)
T COG2217         519 VVFVAVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLT--GDNRRTAEAIAKELGIDEVR-AELLPEDKAEIVREL  595 (713)
T ss_pred             EEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEc--CCCHHHHHHHHHHcChHhhe-ccCCcHHHHHHHHHH
Confidence            588999996443    67788999999999999999999999  65556666667888996544 565554443 33445


Q ss_pred             HhcCchhhhhcCCeEEEeecCcccchhhccC--------CccccCCCCCCCEEEec
Q 021350          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGL--------GLKVVENVEEADFILAH  154 (313)
Q Consensus       107 ~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~--------g~~~~~~~~~~~~~~~~  154 (313)
                      +++        |+++..++-+.+....|...        |-++..  +..|++++.
T Consensus       596 ~~~--------g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~--eaADvvL~~  641 (713)
T COG2217         596 QAE--------GRKVAMVGDGINDAPALAAADVGIAMGSGTDVAI--EAADVVLMR  641 (713)
T ss_pred             Hhc--------CCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHH--HhCCEEEec
Confidence            433        57888888888877666553        222222  456777764

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=91.36  E-value=2.1  Score=37.03  Aligned_cols=38  Identities=21%  Similarity=0.085  Sum_probs=29.7

Q ss_pred             hCCCCCcEEEEcCCchhhHHHHHHc-CCcEEEEcCCCCCC
Q 021350          239 VGVDACDSIAVGDSLHHDIKGANAA-GIQSVFIIGGIHAT  277 (313)
Q Consensus       239 lgv~~~~~v~IGDs~~~Di~~a~~a-G~~~i~V~~G~~~~  277 (313)
                      -|+.-++++||||+- +|+=+-... +.+.+..+.|+.-.
T Consensus       178 ~gv~yer~iYvGDG~-nD~CP~l~Lr~~D~ampRkgfpl~  216 (256)
T KOG3120|consen  178 DGVRYERLIYVGDGA-NDFCPVLRLRACDVAMPRKGFPLW  216 (256)
T ss_pred             cCCceeeEEEEcCCC-CCcCcchhcccCceecccCCCchH
Confidence            488889999999996 999776544 56788888887643

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=90.62  E-value=0.54  Score=47.92  Aligned_cols=89  Identities=15%  Similarity=0.141  Sum_probs=51.7

Q ss_pred             CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecC-CCCHHHHHHHHHHhCCCCCcE
Q 021350          169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMG-KPDKIIYKSAMAMVGVDACDS  246 (313)
Q Consensus       169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g-KP~~~~~~~~~~~lgv~~~~~  246 (313)
                      -..++..+++..|++.|++. +.|.++...            ..++-..+|......+ +|.  -=....+++.-.-..+
T Consensus       537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~------------A~~iA~~lGId~v~AellPe--dK~~~V~~l~~~g~~V  602 (713)
T COG2217         537 ELRPDAKEAIAALKALGIKVVMLTGDNRRT------------AEAIAKELGIDEVRAELLPE--DKAEIVRELQAEGRKV  602 (713)
T ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCCHHH------------HHHHHHHcChHhheccCCcH--HHHHHHHHHHhcCCEE
Confidence            34578999999999999998 556543311            1112222343222111 343  3333444443233789


Q ss_pred             EEEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350          247 IAVGDSLHHDIKGANAAGIQSVFIIGG  273 (313)
Q Consensus       247 v~IGDs~~~Di~~a~~aG~~~i~V~~G  273 (313)
                      .||||.+ ||--+..+|. -+|.+.+|
T Consensus       603 amVGDGI-NDAPALA~Ad-VGiAmG~G  627 (713)
T COG2217         603 AMVGDGI-NDAPALAAAD-VGIAMGSG  627 (713)
T ss_pred             EEEeCCc-hhHHHHhhcC-eeEeecCC
Confidence            9999997 9977777776 34555554

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=90.57  E-value=0.74  Score=39.24  Aligned_cols=57  Identities=21%  Similarity=0.072  Sum_probs=38.8

Q ss_pred             CccEEEEeccceeecCC-------cc-CccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           29 RFKAWLLDQFGVLHDGK-------KP-YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~-------~~-~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      .-++++.|+|+||++..       .. =|+..++|+.+.+ ...+++-|-+  ...-+...+..+|+.
T Consensus        20 ~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~-~feIvVwTAa--~~~ya~~~l~~l~~~   84 (195)
T TIGR02245        20 GKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE-DYDIVIWSAT--SMKWIEIKMTELGVL   84 (195)
T ss_pred             CCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh-CCEEEEEecC--CHHHHHHHHHHhccc
Confidence            55899999999999853       11 2788888888777 5777777732  233344455556654

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>COG4850 Uncharacterized conserved protein [Function unknown]

Probab=90.32  E-value=0.69  Score=42.09  Aligned_cols=58  Identities=19%  Similarity=0.204  Sum_probs=47.4

Q ss_pred             EEEEeccceeec-------------------CCccCccHHHHHHHHHHCC-CcEEEEeCCCCCc-hHHHHHHHhCCCCC
Q 021350           32 AWLLDQFGVLHD-------------------GKKPYPGAISTLEMLATTG-AKMVVISNSSRRA-STTIDKLKSLGFDP   89 (313)
Q Consensus        32 ~iifDlDGTL~~-------------------~~~~~~~a~~~l~~l~~~g-~~~~~~Tn~~~~~-~~~~~~l~~~G~~~   89 (313)
                      .+|.|+|+|+..                   ...++||...+.+.|.+.| .+++++||+.... ..+.+.+...+|+.
T Consensus       163 giISDiDDTV~~T~V~~~~r~~~~s~~l~~~tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~  241 (373)
T COG4850         163 GIISDIDDTVKVTGVTEGPRKAGRSLLLHALTRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPY  241 (373)
T ss_pred             eeeeccccceEecccccchHHHHHHhhhcccccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCC
Confidence            589999999865                   2357899999999999888 8999999988655 56677777777874

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=90.32  E-value=7.3  Score=40.43  Aligned_cols=88  Identities=15%  Similarity=0.107  Sum_probs=51.4

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCcee-ecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVR-WMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      ..++...+...|++.|+.. ..|.++..            +-.+.-...|.+.. ---+|+  -=....+.+.-.-..+.
T Consensus       724 vr~~a~~av~~Lk~~Gi~v~mLTGDn~~------------aA~svA~~VGi~~V~aev~P~--~K~~~Ik~lq~~~~~Va  789 (951)
T KOG0207|consen  724 VRPDAALAVAELKSMGIKVVMLTGDNDA------------AARSVAQQVGIDNVYAEVLPE--QKAEKIKEIQKNGGPVA  789 (951)
T ss_pred             cchhHHHHHHHHHhcCceEEEEcCCCHH------------HHHHHHHhhCcceEEeccCch--hhHHHHHHHHhcCCcEE
Confidence            3478888999999999988 56664441            11222233442221 122554  22333444443447899


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGG  273 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G  273 (313)
                      ||||.+ ||--+..+|. -+|.+..|
T Consensus       790 MVGDGI-NDaPALA~Ad-VGIaig~g  813 (951)
T KOG0207|consen  790 MVGDGI-NDAPALAQAD-VGIAIGAG  813 (951)
T ss_pred             EEeCCC-CccHHHHhhc-cceeeccc
Confidence            999997 9965555555 44555555

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=90.23  E-value=0.51  Score=41.67  Aligned_cols=50  Identities=16%  Similarity=0.252  Sum_probs=38.6

Q ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~   99 (313)
                      ++||+.+.|+.|+++|+++.++||+.  ...+...++.+|+.... +.++++.
T Consensus       109 l~pgv~e~L~~L~~~g~~l~I~Tn~~--~~~~~~~l~~~gl~~~F-d~iv~~~  158 (248)
T PLN02770        109 PLNGLYKLKKWIEDRGLKRAAVTNAP--RENAELMISLLGLSDFF-QAVIIGS  158 (248)
T ss_pred             cCccHHHHHHHHHHcCCeEEEEeCCC--HHHHHHHHHHcCChhhC-cEEEecC
Confidence            46788899999999999999999765  45566678888987554 6666554

>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]

Probab=90.20  E-value=0.54  Score=39.83  Aligned_cols=52  Identities=19%  Similarity=0.249  Sum_probs=36.2

Q ss_pred             cEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           31 KAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        31 k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      -.++||+||||.-... ..|...++++.|+.. ..+.++-     -.++.+..+++|.+
T Consensus        12 ~l~lfdvdgtLt~~r~~~~~e~~~~l~~lr~~-v~ig~Vg-----gsDl~k~~eqlG~~   64 (252)
T KOG3189|consen   12 TLCLFDVDGTLTPPRQKVTPEMLEFLQKLRKK-VTIGFVG-----GSDLSKQQEQLGDN   64 (252)
T ss_pred             eEEEEecCCccccccccCCHHHHHHHHHHhhh-eEEEEee-----cHHHHHHHHHhchh
Confidence            4799999999998764 457888888887754 3333333     34566666777765

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=90.16  E-value=0.42  Score=41.04  Aligned_cols=50  Identities=30%  Similarity=0.471  Sum_probs=38.6

Q ss_pred             ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (313)
Q Consensus        46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~   98 (313)
                      +++|++.++|+.|++.|+++.++||+.  .......++.+|+.... +.++++
T Consensus        94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~--~~~~~~~l~~~~l~~~f-~~i~~~  143 (221)
T TIGR02253        94 RVYPGVRDTLMELRESGYRLGIITDGL--PVKQWEKLERLGVRDFF-DAVITS  143 (221)
T ss_pred             CCCCCHHHHHHHHHHCCCEEEEEeCCc--hHHHHHHHHhCChHHhc-cEEEEe
Confidence            467899999999999999999999875  33455668888887544 556554

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=90.02  E-value=0.39  Score=38.95  Aligned_cols=54  Identities=33%  Similarity=0.514  Sum_probs=42.4

Q ss_pred             cCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (313)
Q Consensus        43 ~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~   99 (313)
                      ...+++|++.++|+.|++.|+++.++||+.  .+.+...++.+|+.... +.++++.
T Consensus        74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~--~~~~~~~l~~~~~~~~f-~~i~~~~  127 (176)
T PF13419_consen   74 SKLQPYPGVRELLERLKAKGIPLVIVSNGS--RERIERVLERLGLDDYF-DEIISSD  127 (176)
T ss_dssp             GGEEESTTHHHHHHHHHHTTSEEEEEESSE--HHHHHHHHHHTTHGGGC-SEEEEGG
T ss_pred             hccchhhhhhhhhhhcccccceeEEeecCC--ccccccccccccccccc-ccccccc
Confidence            344678999999999999999999999874  56677888889987444 6666553

...

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=89.92  E-value=4  Score=42.28  Aligned_cols=48  Identities=17%  Similarity=0.270  Sum_probs=38.7

Q ss_pred             ceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           39 GVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        39 GTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      |.+.-.+++-|++.+++++|++.|+++.++|  |-.........+++|+.
T Consensus       435 Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miT--GD~~~tA~~IA~~lGI~  482 (755)
T TIGR01647       435 GLLPLFDPPRHDTKETIERARHLGVEVKMVT--GDHLAIAKETARRLGLG  482 (755)
T ss_pred             EEeeccCCChhhHHHHHHHHHHCCCeEEEEC--CCCHHHHHHHHHHcCCC
Confidence            3333366777999999999999999999999  66666677777888986

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=89.84  E-value=3.2  Score=43.89  Aligned_cols=43  Identities=14%  Similarity=0.275  Sum_probs=35.8

Q ss_pred             CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        44 ~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      .+++=|++.+++++|++.|++++++|  |-.........+++|+.
T Consensus       548 ~Dp~R~~a~~aI~~l~~aGI~v~miT--GD~~~tA~~IA~~lGI~  590 (902)
T PRK10517        548 LDPPKETTAPALKALKASGVTVKILT--GDSELVAAKVCHEVGLD  590 (902)
T ss_pred             hCcchhhHHHHHHHHHHCCCEEEEEc--CCCHHHHHHHHHHcCCC
Confidence            45667899999999999999999999  65566667777888885

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=89.80  E-value=3.8  Score=43.79  Aligned_cols=44  Identities=14%  Similarity=0.201  Sum_probs=38.6

Q ss_pred             CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (313)
Q Consensus        44 ~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~   89 (313)
                      .+++-+++.++++++++.|++++++|  |+.........+++|+-.
T Consensus       566 ~Dplr~~v~~aI~~l~~~Gi~v~~~T--Gd~~~ta~~ia~~~gi~~  609 (997)
T TIGR01106       566 IDPPRAAVPDAVGKCRSAGIKVIMVT--GDHPITAKAIAKGVGIIS  609 (997)
T ss_pred             cCCChHHHHHHHHHHHHCCCeEEEEC--CCCHHHHHHHHHHcCCCC
Confidence            45666899999999999999999999  888888888889999953

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=89.47  E-value=4.7  Score=42.85  Aligned_cols=49  Identities=14%  Similarity=0.200  Sum_probs=39.4

Q ss_pred             ceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350           39 GVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (313)
Q Consensus        39 GTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~   89 (313)
                      |.+.-.+++-|++.+++++|++.|++++++|  |-.........+++|+..
T Consensus       572 Gli~~~Dplr~~~~~aI~~l~~aGI~v~miT--GD~~~tA~~iA~~~GI~~  620 (941)
T TIGR01517       572 GVVGIKDPLRPGVREAVQECQRAGITVRMVT--GDNIDTAKAIARNCGILT  620 (941)
T ss_pred             EEeeccCCCchhHHHHHHHHHHCCCEEEEEC--CCChHHHHHHHHHcCCCC
Confidence            4444466777899999999999999999999  666667777777888864

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=89.44  E-value=0.52  Score=39.93  Aligned_cols=49  Identities=33%  Similarity=0.344  Sum_probs=37.7

Q ss_pred             ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (313)
Q Consensus        46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~   98 (313)
                      +++|++.++|+.|++.|+++.++||+..   .+...++.+|+.... +.++.+
T Consensus       105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~---~~~~~l~~~~l~~~f-d~i~~s  153 (203)
T TIGR02252       105 QVYPDAIKLLKDLRERGLILGVISNFDS---RLRGLLEALGLLEYF-DFVVTS  153 (203)
T ss_pred             eeCcCHHHHHHHHHHCCCEEEEEeCCch---hHHHHHHHCCcHHhc-ceEEee
Confidence            5689999999999999999999998653   245567888886544 555544

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=89.39  E-value=0.52  Score=40.97  Aligned_cols=50  Identities=20%  Similarity=0.331  Sum_probs=37.8

Q ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~   99 (313)
                      ++||+.+.|..|+++|+++.++||+.  .+.+...++.+|+.... +.++++.
T Consensus        94 ~~~g~~e~L~~Lk~~g~~~~i~Tn~~--~~~~~~~l~~~~l~~~f-d~iv~s~  143 (224)
T PRK14988         94 LREDTVPFLEALKASGKRRILLTNAH--PHNLAVKLEHTGLDAHL-DLLLSTH  143 (224)
T ss_pred             cCCCHHHHHHHHHhCCCeEEEEeCcC--HHHHHHHHHHCCcHHHC-CEEEEee
Confidence            46899999999999999999999865  44455567778886544 6665543

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=89.09  E-value=1.2  Score=37.70  Aligned_cols=55  Identities=24%  Similarity=0.244  Sum_probs=41.4

Q ss_pred             EEEeccceee----cCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350           33 WLLDQFGVLH----DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (313)
Q Consensus        33 iifDlDGTL~----~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~   89 (313)
                      +.+-.+++++    ...++.|++.++|+.|++.|+++.++|  +-.........+.+|+..
T Consensus       110 ~~~~~~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~T--GD~~~~a~~~~~~lgi~~  168 (215)
T PF00702_consen  110 IVLAVNLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILT--GDNESTASAIAKQLGIFD  168 (215)
T ss_dssp             EEEEESHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEE--SSEHHHHHHHHHHTTSCS
T ss_pred             cceeecCeEEEEEeecCcchhhhhhhhhhhhccCcceeeee--cccccccccccccccccc
Confidence            4444355443    355778999999999999999999999  545667777778899953

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=89.08  E-value=1.7  Score=43.09  Aligned_cols=98  Identities=16%  Similarity=0.173  Sum_probs=65.2

Q ss_pred             cEEEEeccceeec----CCccCccHHHHHHHHHHCCC-cEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHH-HHHH
Q 021350           31 KAWLLDQFGVLHD----GKKPYPGAISTLEMLATTGA-KMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE-LTHQ  104 (313)
Q Consensus        31 k~iifDlDGTL~~----~~~~~~~a~~~l~~l~~~g~-~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~-~~~~  104 (313)
                      ..+.+-.||++.-    ..++.|++.++|+.|++.|+ ++.++||  .+.......++++|++... ..+..... ...+
T Consensus       343 ~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTg--d~~~~a~~i~~~lgi~~~f-~~~~p~~K~~~i~  419 (536)
T TIGR01512       343 TIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTG--DRRAVAERVARELGIDEVH-AELLPEDKLEIVK  419 (536)
T ss_pred             eEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcC--CCHHHHHHHHHHcCChhhh-hccCcHHHHHHHH
Confidence            4456666776543    56788999999999999999 9999994  4456667777888997543 43333221 1222


Q ss_pred             HHHhcCchhhhhcCCeEEEeecCcccchhhccCCc
Q 021350          105 YLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGL  139 (313)
Q Consensus       105 ~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~  139 (313)
                      .+...        +..+.+++-+.++...++..++
T Consensus       420 ~l~~~--------~~~v~~vGDg~nD~~al~~A~v  446 (536)
T TIGR01512       420 ELREK--------YGPVAMVGDGINDAPALAAADV  446 (536)
T ss_pred             HHHhc--------CCEEEEEeCCHHHHHHHHhCCE
Confidence            33222        4567777777776667776664

.

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=88.96  E-value=4.1  Score=42.88  Aligned_cols=48  Identities=19%  Similarity=0.250  Sum_probs=37.8

Q ss_pred             ceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           39 GVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        39 GTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      |.+.-.+++=|++.+++++|++.|++++++|  |-.........+++|+.
T Consensus       508 Gli~l~Dp~R~~~~~aI~~l~~aGI~vvmiT--GD~~~tA~aIA~~lGI~  555 (867)
T TIGR01524       508 GFLGFLDPPKESTKEAIAALFKNGINVKVLT--GDNEIVTARICQEVGID  555 (867)
T ss_pred             EEEEeeCCCchhHHHHHHHHHHCCCEEEEEc--CCCHHHHHHHHHHcCCC
Confidence            3333366777899999999999999999999  65566666667788885

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function

Probab=88.77  E-value=1.5  Score=34.83  Aligned_cols=56  Identities=20%  Similarity=0.218  Sum_probs=39.4

Q ss_pred             EEEEeccceeec--CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           32 AWLLDQFGVLHD--GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        32 ~iifDlDGTL~~--~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      .-++|+||.|++  +.+-+ ...+.++.+.+.|.|++++|.-..+++.+.+..+.++-.
T Consensus        45 iAildL~G~~l~l~S~R~~-~~~evi~~I~~~G~PviVAtDV~p~P~~V~Kia~~f~A~  102 (138)
T PF04312_consen   45 IAILDLDGELLDLKSSRNM-SRSEVIEWISEYGKPVIVATDVSPPPETVKKIARSFNAV  102 (138)
T ss_pred             EEEEecCCcEEEEEeecCC-CHHHHHHHHHHcCCEEEEEecCCCCcHHHHHHHHHhCCc
Confidence            468999999887  33222 456788888999999999997555555555555555544

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=88.46  E-value=0.57  Score=38.62  Aligned_cols=50  Identities=32%  Similarity=0.456  Sum_probs=36.2

Q ss_pred             CccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (313)
Q Consensus        45 ~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~   98 (313)
                      .+++|++.+++++|++.|+++.++||+....   ...+.++|+.... +.++++
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~---~~~~~~~~l~~~f-~~i~~~  133 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH---AVLVQELGLRDLF-DVVIFS  133 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH---HHHHHhcCCHHHC-CEEEEc
Confidence            3567999999999999999999999877443   2333447876544 555543

HAD subfamilies caused by an overly broad single model.

>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=88.26  E-value=2.6  Score=34.27  Aligned_cols=69  Identities=19%  Similarity=0.253  Sum_probs=50.6

Q ss_pred             CccEEEEeccceeec--CCccCccHHHHHHHHHH-CC-CcEEEEeCCCC--Cc---hHHHHHHH-hCCCCCcccccccch
Q 021350           29 RFKAWLLDQFGVLHD--GKKPYPGAISTLEMLAT-TG-AKMVVISNSSR--RA---STTIDKLK-SLGFDPSLFAGAITS   98 (313)
Q Consensus        29 ~~k~iifDlDGTL~~--~~~~~~~a~~~l~~l~~-~g-~~~~~~Tn~~~--~~---~~~~~~l~-~~G~~~~~~~~ii~~   98 (313)
                      .+|+++||-|.|+.-  +..++|.-...++.++. -| +.+.+++|+..  ..   .+.++.|+ +.|+++-. +...-|
T Consensus        42 ~ikavVlDKDNcit~P~~~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIpVlR-Hs~kKP  120 (190)
T KOG2961|consen   42 GIKAVVLDKDNCITAPYSLAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIPVLR-HSVKKP  120 (190)
T ss_pred             CceEEEEcCCCeeeCCcccccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCceEe-ecccCC
Confidence            599999999999876  55678888888888886 44 78888899542  22   35677776 69998766 444433

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=88.16  E-value=0.59  Score=39.91  Aligned_cols=53  Identities=17%  Similarity=0.218  Sum_probs=34.9

Q ss_pred             CccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (313)
Q Consensus        45 ~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~   98 (313)
                      .+++|++.++|+.|+++|+++.++||+..........+...++.... +.++.+
T Consensus        93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f-d~v~~s  145 (211)
T TIGR02247        93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF-DAVVES  145 (211)
T ss_pred             cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC-CEEEEe
Confidence            35689999999999999999999999764432222233334543333 444443

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=88.13  E-value=0.81  Score=40.85  Aligned_cols=50  Identities=12%  Similarity=0.192  Sum_probs=38.3

Q ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~   99 (313)
                      ++|++.+.|+.|++.|+++.++||+.  ...+...++.+|+.... +.++++.
T Consensus       110 l~pg~~e~L~~L~~~g~~l~I~Tn~~--~~~~~~~l~~~gl~~~F-d~ii~~~  159 (260)
T PLN03243        110 LRPGSREFVQALKKHEIPIAVASTRP--RRYLERAIEAVGMEGFF-SVVLAAE  159 (260)
T ss_pred             cCCCHHHHHHHHHHCCCEEEEEeCcC--HHHHHHHHHHcCCHhhC-cEEEecc
Confidence            57889999999999999999999865  34555667778887554 6666553

>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]

Probab=88.10  E-value=1  Score=44.66  Aligned_cols=72  Identities=11%  Similarity=0.067  Sum_probs=48.1

Q ss_pred             CccEEEEeccceeecCCc-----------c-CccHHHHHHHHHHCCCcEEEEeCCC----CCchHHHHHHHhCCCCCccc
Q 021350           29 RFKAWLLDQFGVLHDGKK-----------P-YPGAISTLEMLATTGAKMVVISNSS----RRASTTIDKLKSLGFDPSLF   92 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~-----------~-~~~a~~~l~~l~~~g~~~~~~Tn~~----~~~~~~~~~l~~~G~~~~~~   92 (313)
                      .-+.|+.|+|||+..+.-           + ..|+++..-+..++|++++++|-..    -.++.+...+++-|-..+.=
T Consensus       529 n~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdG  608 (738)
T KOG2116|consen  529 NDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDG  608 (738)
T ss_pred             CCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCC
Confidence            347899999999998542           1 2467778888899999999999422    12346667777777654431


Q ss_pred             ccccchHH
Q 021350           93 AGAITSGE  100 (313)
Q Consensus        93 ~~ii~~~~  100 (313)
                      --+++|..
T Consensus       609 PViLSPd~  616 (738)
T KOG2116|consen  609 PVILSPDS  616 (738)
T ss_pred             CEEeCCCc
Confidence            23444433

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=88.04  E-value=5.7  Score=41.99  Aligned_cols=43  Identities=16%  Similarity=0.287  Sum_probs=35.6

Q ss_pred             CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        44 ~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      .+++=|++.+++++|++.|++++++|  |-.........+++|+.
T Consensus       548 ~Dp~R~~a~~aI~~l~~aGI~v~miT--GD~~~tA~aIA~~lGI~  590 (903)
T PRK15122        548 LDPPKESAAPAIAALRENGVAVKVLT--GDNPIVTAKICREVGLE  590 (903)
T ss_pred             cCccHHHHHHHHHHHHHCCCeEEEEC--CCCHHHHHHHHHHcCCC
Confidence            56677899999999999999999999  65566666667778885

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=87.99  E-value=0.82  Score=37.91  Aligned_cols=49  Identities=20%  Similarity=0.249  Sum_probs=37.9

Q ss_pred             CccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (313)
Q Consensus        45 ~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~   98 (313)
                      .+++|++.++|+.|++.|+++.++||+    ..+...++.+|+.... +.++.+
T Consensus        87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~----~~~~~~l~~~~l~~~f-~~v~~~  135 (185)
T TIGR02009        87 AEVLPGIENFLKRLKKKGIAVGLGSSS----KNADRILAKLGLTDYF-DAIVDA  135 (185)
T ss_pred             CCCCcCHHHHHHHHHHcCCeEEEEeCc----hhHHHHHHHcChHHHC-CEeeeh
Confidence            467899999999999999999999976    3456667888886544 555544

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=87.66  E-value=1  Score=38.75  Aligned_cols=50  Identities=16%  Similarity=0.184  Sum_probs=36.5

Q ss_pred             ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (313)
Q Consensus        46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~   98 (313)
                      +++|++.++|..|+++|+++.++||+.  ...+...++.+|+.... +.++++
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~--~~~~~~~l~~~~l~~~f-~~~~~~  141 (222)
T PRK10826         92 PLLPGVREALALCKAQGLKIGLASASP--LHMLEAVLTMFDLRDYF-DALASA  141 (222)
T ss_pred             CCCCCHHHHHHHHHHCCCeEEEEeCCc--HHHHHHHHHhCcchhcc-cEEEEc
Confidence            356789999999999999999999755  34455566778886554 544443

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=87.66  E-value=4  Score=41.52  Aligned_cols=90  Identities=11%  Similarity=0.055  Sum_probs=54.8

Q ss_pred             CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      ...++.+++++.|++.|++. ++|.+...            .....-..+|...... .-.|+-=....+.+.=.-..+.
T Consensus       446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~------------ta~~iA~~lGI~~v~a-~~~PedK~~~v~~lq~~g~~Va  512 (675)
T TIGR01497       446 IVKGGIKERFAQLRKMGIKTIMITGDNRL------------TAAAIAAEAGVDDFIA-EATPEDKIALIRQEQAEGKLVA  512 (675)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEcCCCHH------------HHHHHHHHcCCCEEEc-CCCHHHHHHHHHHHHHcCCeEE
Confidence            34589999999999999988 56654331            1112222344433222 2333333333333322335799


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGG  273 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G  273 (313)
                      |+||+. ||..+.+++++ ++.+.+|
T Consensus       513 mvGDG~-NDapAL~~Adv-GiAm~~g  536 (675)
T TIGR01497       513 MTGDGT-NDAPALAQADV-GVAMNSG  536 (675)
T ss_pred             EECCCc-chHHHHHhCCE-eEEeCCC
Confidence            999997 99999999994 4555554

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=87.50  E-value=1  Score=38.48  Aligned_cols=48  Identities=27%  Similarity=0.311  Sum_probs=37.7

Q ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccc
Q 021350           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAIT   97 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~   97 (313)
                      ++|++.++|+.|+++|+++.++||+.  ...+...++.+|+.... +.+++
T Consensus        83 ~~~g~~~~l~~L~~~g~~~~i~S~~~--~~~~~~~l~~~gl~~~f-~~i~~  130 (214)
T PRK13288         83 EYETVYETLKTLKKQGYKLGIVTTKM--RDTVEMGLKLTGLDEFF-DVVIT  130 (214)
T ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCC--HHHHHHHHHHcCChhce-eEEEe
Confidence            56889999999999999999999765  45667778888987554 55554

>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]

Probab=87.23  E-value=0.64  Score=43.31  Aligned_cols=81  Identities=25%  Similarity=0.286  Sum_probs=53.6

Q ss_pred             CccEEEEeccceeecCC-------------ccCccHHHHHHHHHHCCCcEEEEeCCCCC---c---hHHH----HHHHhC
Q 021350           29 RFKAWLLDQFGVLHDGK-------------KPYPGAISTLEMLATTGAKMVVISNSSRR---A---STTI----DKLKSL   85 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~-------------~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~---~---~~~~----~~l~~~   85 (313)
                      ..|.+.||+||||++..             .+++....-+..|.+.|+..++.||+...   .   ++..    .....+
T Consensus        74 ~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl  153 (422)
T KOG2134|consen   74 GSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANL  153 (422)
T ss_pred             CcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhc
Confidence            46789999999999832             24567778899999999999999995522   1   1222    333568


Q ss_pred             CCCCcccccccc-----hHHHHHHHHHhc
Q 021350           86 GFDPSLFAGAIT-----SGELTHQYLLRR  109 (313)
Q Consensus        86 G~~~~~~~~ii~-----~~~~~~~~l~~~  109 (313)
                      |+++.....++.     |...+.+++.+.
T Consensus       154 ~vPi~~~~A~~~~~yRKP~tGMwe~~~~~  182 (422)
T KOG2134|consen  154 GVPIQLLAAIIKGKYRKPSTGMWEFLKRL  182 (422)
T ss_pred             CCceEEeeeccCCcccCcchhHHHHHHHH
Confidence            888544333222     455566776643

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=86.95  E-value=6.3  Score=42.41  Aligned_cols=43  Identities=12%  Similarity=0.140  Sum_probs=36.7

Q ss_pred             CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        44 ~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      .+++-+++.++|+.+++.|++++++|  |..........+++|+.
T Consensus       644 ~Dp~r~~v~~aI~~l~~aGIkv~MiT--GD~~~tA~~iA~~~Gi~  686 (1053)
T TIGR01523       644 YDPPRNESAGAVEKCHQAGINVHMLT--GDFPETAKAIAQEVGII  686 (1053)
T ss_pred             ecCCchhHHHHHHHHHHCCCEEEEEC--CCCHHHHHHHHHHcCCC
Confidence            45667899999999999999999999  76677777778888985

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=86.76  E-value=9.4  Score=40.48  Aligned_cols=45  Identities=22%  Similarity=0.327  Sum_probs=35.9

Q ss_pred             CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCc
Q 021350           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (313)
Q Consensus        44 ~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~   90 (313)
                      .+++=+++.++|+.+++.|+++.++|  |-.........+++|+...
T Consensus       545 ~Dppr~~v~~aI~~l~~AGI~v~MiT--GD~~~TA~aIa~~~Gi~~~  589 (917)
T COG0474         545 EDPPREDVKEAIEELREAGIKVWMIT--GDHVETAIAIAKECGIEAE  589 (917)
T ss_pred             cCCCCccHHHHHHHHHHCCCcEEEEC--CCCHHHHHHHHHHcCCCCC
Confidence            35566899999999999999999999  6556666666777787543

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=86.50  E-value=1.2  Score=38.09  Aligned_cols=51  Identities=20%  Similarity=0.360  Sum_probs=38.5

Q ss_pred             ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC--CcccccccchH
Q 021350           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD--PSLFAGAITSG   99 (313)
Q Consensus        46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~--~~~~~~ii~~~   99 (313)
                      +++||+.++|++|+++|+++.++||+.  .+.....++.+|+.  ... +.++++.
T Consensus        87 ~l~~G~~~~L~~L~~~g~~~~ivT~~~--~~~~~~~l~~~~l~~~~~f-~~i~~~~  139 (220)
T TIGR03351        87 VALPGAEEAFRSLRSSGIKVALTTGFD--RDTAERLLEKLGWTVGDDV-DAVVCPS  139 (220)
T ss_pred             ccCCCHHHHHHHHHHCCCEEEEEeCCc--hHHHHHHHHHhhhhhhccC-CEEEcCC
Confidence            578999999999999999999999765  45555667777876  333 5565553

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PLN02645 phosphoglycolate phosphatase

Probab=86.35  E-value=3.2  Score=38.00  Aligned_cols=88  Identities=15%  Similarity=0.145  Sum_probs=54.6

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCc--e-eecCCCCHHHHHHHHHHhCCCCCc
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGE--V-RWMGKPDKIIYKSAMAMVGVDACD  245 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~--~-~~~gKP~~~~~~~~~~~lgv~~~~  245 (313)
                      .+++..++++.++++|.++ ++||......         ..+...+..+|..  . ..++ + .......++..++...+
T Consensus        45 ~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~---------~~~~~~l~~lGi~~~~~~I~t-s-~~~~~~~l~~~~~~~~~  113 (311)
T PLN02645         45 LIEGVPETLDMLRSMGKKLVFVTNNSTKSR---------AQYGKKFESLGLNVTEEEIFS-S-SFAAAAYLKSINFPKDK  113 (311)
T ss_pred             cCcCHHHHHHHHHHCCCEEEEEeCCCCCCH---------HHHHHHHHHCCCCCChhhEee-h-HHHHHHHHHhhccCCCC
Confidence            4588899999999999998 7898554221         1122223333321  1 1111 1 12444555555665556


Q ss_pred             EEEEcCCchhhHHHHHHcCCcEEE
Q 021350          246 SIAVGDSLHHDIKGANAAGIQSVF  269 (313)
Q Consensus       246 ~v~IGDs~~~Di~~a~~aG~~~i~  269 (313)
                      .++++++ ..+.+.++.+|+.++.
T Consensus       114 ~V~viG~-~~~~~~l~~~Gi~~~~  136 (311)
T PLN02645        114 KVYVIGE-EGILEELELAGFQYLG  136 (311)
T ss_pred             EEEEEcC-HHHHHHHHHCCCEEec
Confidence            6888888 4899999999998754

>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]

Probab=86.34  E-value=4.8  Score=35.02  Aligned_cols=101  Identities=14%  Similarity=0.148  Sum_probs=68.8

Q ss_pred             CCHHHHHHHHHHHHhCCCcEEEEcCCccccccchh-ccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcE
Q 021350          169 MSLQDLEKILEICASKKIPMVVANPDYVTVEARAL-RVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDS  246 (313)
Q Consensus       169 ~~~~~~~~~l~~l~~~g~~~i~tn~d~~~~~~~~~-~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~  246 (313)
                      ..|+++..+++.-+..|+++++.+.+.+......+ .-..|.+...+.. +..  ..=-|-.-..|..+.+.+|.++.++
T Consensus       123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt--~iG~K~e~~sy~~I~~~Ig~s~~ei  200 (254)
T KOG2630|consen  123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDT--TIGLKVESQSYKKIGHLIGKSPREI  200 (254)
T ss_pred             cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhc--cccceehhHHHHHHHHHhCCChhhe
Confidence            45788888888778889988665555433222110 1122333332221 111  1112667779999999999999999


Q ss_pred             EEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350          247 IAVGDSLHHDIKGANAAGIQSVFIIG  272 (313)
Q Consensus       247 v~IGDs~~~Di~~a~~aG~~~i~V~~  272 (313)
                      +..-|.. .-..+|+.+|+.+.++..
T Consensus       201 LfLTd~~-~Ea~aa~~aGl~a~l~~r  225 (254)
T KOG2630|consen  201 LFLTDVP-REAAAARKAGLQAGLVSR  225 (254)
T ss_pred             EEeccCh-HHHHHHHhcccceeeeec
Confidence            9999996 999999999998888876

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=85.63  E-value=8.7  Score=39.19  Aligned_cols=96  Identities=19%  Similarity=0.098  Sum_probs=65.2

Q ss_pred             ccEEEEecccee----ecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHHH--H
Q 021350           30 FKAWLLDQFGVL----HDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELT--H  103 (313)
Q Consensus        30 ~k~iifDlDGTL----~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~--~  103 (313)
                      .+.+.+-.|+++    .-.+.+=|++.+++++|++.|++++++|  |-.........+++|++... .+. +|.+..  .
T Consensus       425 ~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiT--GDn~~TA~aIA~elGId~v~-A~~-~PedK~~iV  500 (679)
T PRK01122        425 GTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMIT--GDNPLTAAAIAAEAGVDDFL-AEA-TPEDKLALI  500 (679)
T ss_pred             CcEEEEEECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEEC--CCCHHHHHHHHHHcCCcEEE-ccC-CHHHHHHHH
Confidence            455666555554    3466777999999999999999999999  66667777778889996322 222 333321  1


Q ss_pred             HHHHhcCchhhhhcCCeEEEeecCcccchhhccC
Q 021350          104 QYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGL  137 (313)
Q Consensus       104 ~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~  137 (313)
                      +.+.+ .       |+.|.+.+-+.+....|.+.
T Consensus       501 ~~lQ~-~-------G~~VaMtGDGvNDAPALa~A  526 (679)
T PRK01122        501 RQEQA-E-------GRLVAMTGDGTNDAPALAQA  526 (679)
T ss_pred             HHHHH-c-------CCeEEEECCCcchHHHHHhC
Confidence            22222 2       66777888888887777765

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=85.48  E-value=1.4  Score=37.29  Aligned_cols=51  Identities=24%  Similarity=0.356  Sum_probs=38.7

Q ss_pred             CccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (313)
Q Consensus        45 ~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~   98 (313)
                      .+++|++.+.|++|+++|+++.++||+.  ...+...++.+|+.... +.++++
T Consensus        74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~--~~~~~~~l~~~~l~~~f-~~i~~~  124 (205)
T TIGR01454        74 VEVFPGVPELLAELRADGVGTAIATGKS--GPRARSLLEALGLLPLF-DHVIGS  124 (205)
T ss_pred             cccCCCHHHHHHHHHHCCCeEEEEeCCc--hHHHHHHHHHcCChhhe-eeEEec
Confidence            4678999999999999999999999765  34455667888886443 555443

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=85.28  E-value=8.2  Score=39.33  Aligned_cols=96  Identities=13%  Similarity=0.022  Sum_probs=64.3

Q ss_pred             ccEEEEecccee----ecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHH--HH
Q 021350           30 FKAWLLDQFGVL----HDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL--TH  103 (313)
Q Consensus        30 ~k~iifDlDGTL----~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~--~~  103 (313)
                      .+.+..-.|+++    .-.+++=|++.+++++|++.|++++++|  |-.........+++|++... .+. +|.+.  ..
T Consensus       421 ~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiT--GDn~~TA~aIA~elGI~~v~-A~~-~PedK~~iV  496 (673)
T PRK14010        421 GTPLVVLEDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCT--GDNELTAATIAKEAGVDRFV-AEC-KPEDKINVI  496 (673)
T ss_pred             CeEEEEEECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEEC--CCCHHHHHHHHHHcCCceEE-cCC-CHHHHHHHH
Confidence            444443335553    3356777899999999999999999999  76677777778889996322 333 33332  22


Q ss_pred             HHHHhcCchhhhhcCCeEEEeecCcccchhhccC
Q 021350          104 QYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGL  137 (313)
Q Consensus       104 ~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~  137 (313)
                      +.+.+ .       |+.|-+.+-+.+....|.+.
T Consensus       497 ~~lQ~-~-------G~~VaMtGDGvNDAPALa~A  522 (673)
T PRK14010        497 REEQA-K-------GHIVAMTGDGTNDAPALAEA  522 (673)
T ss_pred             HHHHh-C-------CCEEEEECCChhhHHHHHhC
Confidence            22322 2       67777888888877777775

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=84.84  E-value=1.8  Score=36.82  Aligned_cols=50  Identities=22%  Similarity=0.355  Sum_probs=38.2

Q ss_pred             CccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccc
Q 021350           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAIT   97 (313)
Q Consensus        45 ~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~   97 (313)
                      .+++|++.++|+.|+++|+++.++||+.  ...+...++.+|+.... +.+++
T Consensus        84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~--~~~~~~~l~~~~l~~~f-~~~~~  133 (213)
T TIGR01449        84 TSVFPGVEATLGALRAKGLRLGLVTNKP--TPLARPLLELLGLAKYF-SVLIG  133 (213)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCC--HHHHHHHHHHcCcHhhC-cEEEe
Confidence            3578999999999999999999999764  45566677888886443 44443

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PRK11587 putative phosphatase; Provisional

Probab=84.58  E-value=1.9  Score=37.08  Aligned_cols=48  Identities=23%  Similarity=0.340  Sum_probs=34.4

Q ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~   98 (313)
                      ++||+.++|+.|+++|+++.++||+.+.  .....++..|+.. . +.+++.
T Consensus        84 ~~pg~~e~L~~L~~~g~~~~ivTn~~~~--~~~~~l~~~~l~~-~-~~i~~~  131 (218)
T PRK11587         84 ALPGAIALLNHLNKLGIPWAIVTSGSVP--VASARHKAAGLPA-P-EVFVTA  131 (218)
T ss_pred             eCcCHHHHHHHHHHcCCcEEEEcCCCch--HHHHHHHhcCCCC-c-cEEEEH
Confidence            4688899999999999999999987643  3345566777742 2 444443

>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=84.52  E-value=3.8  Score=37.84  Aligned_cols=100  Identities=19%  Similarity=0.263  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCc-hHHHHHHHh---cCceee-----------------------
Q 021350          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPG-TLASKFEKL---GGEVRW-----------------------  223 (313)
Q Consensus       172 ~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g-~~~~~~~~~---~~~~~~-----------------------  223 (313)
                      +.+...++.|+++|.++ ++||....+-...- ....| ....+|+..   ..++.+                       
T Consensus       243 ~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM-~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv  321 (510)
T KOG2470|consen  243 PQLLAFLRKLKDHGKKLFLITNSPYSFVDKGM-RFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKV  321 (510)
T ss_pred             HHHHHHHHHHHHhcCcEEEEeCCchhhhhcCc-eeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhh
Confidence            46777888889999988 89997654432221 12222 222333321   011100                       


Q ss_pred             --cCCCC---HHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHH-HcCCcEEEEcC
Q 021350          224 --MGKPD---KIIYKSAMAMVGVDACDSIAVGDSLHHDIKGAN-AAGIQSVFIIG  272 (313)
Q Consensus       224 --~gKP~---~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~-~aG~~~i~V~~  272 (313)
                        +-|..   ...+...++.-|.--.+++++||.+.+|+.... ..||++-.|-.
T Consensus       322 ~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII~  376 (510)
T KOG2470|consen  322 DKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAIIP  376 (510)
T ss_pred             hhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccchH
Confidence              11111   002334455557788999999999999998887 89998877654

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=84.49  E-value=1.9  Score=35.65  Aligned_cols=49  Identities=20%  Similarity=0.285  Sum_probs=37.2

Q ss_pred             ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (313)
Q Consensus        46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~   99 (313)
                      +++|++.++|+.|+++|+++.++||+..    ....++.+|+.... +.++++.
T Consensus        87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~----~~~~l~~~~l~~~f-~~~~~~~  135 (185)
T TIGR01990        87 DVLPGIKNLLDDLKKNNIKIALASASKN----APTVLEKLGLIDYF-DAIVDPA  135 (185)
T ss_pred             ccCccHHHHHHHHHHCCCeEEEEeCCcc----HHHHHHhcCcHhhC-cEEEehh
Confidence            5789999999999999999999997532    23467888887554 6655543

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=84.34  E-value=2.2  Score=36.89  Aligned_cols=49  Identities=22%  Similarity=0.348  Sum_probs=39.3

Q ss_pred             ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccc
Q 021350           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAIT   97 (313)
Q Consensus        46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~   97 (313)
                      .++|++.+.|..|++.|++..++||.+  ...+...++.+|+.... +.++.
T Consensus        89 ~~~~gv~e~L~~L~~~g~~l~i~T~k~--~~~~~~~l~~~gl~~~F-~~i~g  137 (220)
T COG0546          89 RLFPGVKELLAALKSAGYKLGIVTNKP--ERELDILLKALGLADYF-DVIVG  137 (220)
T ss_pred             ccCCCHHHHHHHHHhCCCeEEEEeCCc--HHHHHHHHHHhCCcccc-ceEEc
Confidence            468999999999999999999999654  56666777888998666 55554

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=84.08  E-value=1.7  Score=38.33  Aligned_cols=51  Identities=16%  Similarity=0.156  Sum_probs=36.7

Q ss_pred             ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (313)
Q Consensus        46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~   98 (313)
                      +++||+.+.|+.|+++|+++.++||+.  ...+...++.+|+....++.++++
T Consensus        99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~--~~~~~~~l~~~gl~~~f~d~ii~~  149 (253)
T TIGR01422        99 SPIPGVIEVIAYLRARGIKIGSTTGYT--REMMDVVAPEAALQGYRPDYNVTT  149 (253)
T ss_pred             ccCCCHHHHHHHHHHCCCeEEEECCCc--HHHHHHHHHHHHhcCCCCceEEcc
Confidence            568999999999999999999999764  445555666667654322444443

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=83.16  E-value=15  Score=39.74  Aligned_cols=49  Identities=14%  Similarity=0.207  Sum_probs=40.8

Q ss_pred             ceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350           39 GVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (313)
Q Consensus        39 GTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~   89 (313)
                      |-+.=.+++-|++.++|+.|++.|++++++|  |..........+++|+-.
T Consensus       649 Gli~~~d~lr~~~~~~I~~l~~agi~v~miT--GD~~~TA~~iA~~~gii~  697 (1054)
T TIGR01657       649 GFIVFENPLKPDTKEVIKELKRASIRTVMIT--GDNPLTAVHVARECGIVN  697 (1054)
T ss_pred             EEEEEecCCCccHHHHHHHHHHCCCeEEEEC--CCCHHHHHHHHHHcCCCC
Confidence            5555566778999999999999999999999  777777777788889953

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=82.75  E-value=6  Score=40.29  Aligned_cols=100  Identities=14%  Similarity=0.038  Sum_probs=68.3

Q ss_pred             CccEEEEecccee----ecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHH--H
Q 021350           29 RFKAWLLDQFGVL----HDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL--T  102 (313)
Q Consensus        29 ~~k~iifDlDGTL----~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~--~  102 (313)
                      ....+.+-.|+++    .-.+++=|++.+++++|++.|++++++|  +..........+++|++... .+. +|.+.  .
T Consensus       425 G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miT--GD~~~ta~~iA~~lGI~~v~-a~~-~PedK~~~  500 (675)
T TIGR01497       425 GGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMIT--GDNRLTAAAIAAEAGVDDFI-AEA-TPEDKIAL  500 (675)
T ss_pred             CCeEEEEEECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEc--CCCHHHHHHHHHHcCCCEEE-cCC-CHHHHHHH
Confidence            3456666556554    3366777999999999999999999999  76677777888899996322 332 23322  2


Q ss_pred             HHHHHhcCchhhhhcCCeEEEeecCcccchhhccCCcc
Q 021350          103 HQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLK  140 (313)
Q Consensus       103 ~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~  140 (313)
                      .+.+.+.        |..+.+.+-+.+....+.+.++-
T Consensus       501 v~~lq~~--------g~~VamvGDG~NDapAL~~AdvG  530 (675)
T TIGR01497       501 IRQEQAE--------GKLVAMTGDGTNDAPALAQADVG  530 (675)
T ss_pred             HHHHHHc--------CCeEEEECCCcchHHHHHhCCEe
Confidence            2223222        56788888888887777776543

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=81.95  E-value=2.4  Score=36.85  Aligned_cols=42  Identities=19%  Similarity=0.291  Sum_probs=31.7

Q ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCc
Q 021350           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~   90 (313)
                      ++|++.+.++.|++.|+++.++||+..  ......++.+|+...
T Consensus        96 ~~pg~~~~L~~L~~~g~~l~i~Tn~~~--~~~~~~l~~~~l~~~  137 (229)
T PRK13226         96 LFDGVEGMLQRLECAGCVWGIVTNKPE--YLARLILPQLGWEQR  137 (229)
T ss_pred             eCCCHHHHHHHHHHCCCeEEEECCCCH--HHHHHHHHHcCchhc
Confidence            467888899999999999999998653  334456677787643

>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]

Probab=81.90  E-value=2.6  Score=40.06  Aligned_cols=63  Identities=13%  Similarity=0.146  Sum_probs=41.9

Q ss_pred             CccEEEEeccceeecCCcc------------CccHHHHHHHHHHCCCcEEEEeCCCC----CchHHHHHHHhCCCCCcc
Q 021350           29 RFKAWLLDQFGVLHDGKKP------------YPGAISTLEMLATTGAKMVVISNSSR----RASTTIDKLKSLGFDPSL   91 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~~------------~~~a~~~l~~l~~~g~~~~~~Tn~~~----~~~~~~~~l~~~G~~~~~   91 (313)
                      ..+.|++|+||||..+.-+            .-+++...-..-++|+.+.++|..+.    .++.+.+..++-|...+.
T Consensus       374 n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrsylrnieQngykLpd  452 (580)
T COG5083         374 NKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSYLRNIEQNGYKLPD  452 (580)
T ss_pred             CCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccCceEEEEEecccccchhhhhhHHHhhhhcCccCCC
Confidence            6789999999999985432            12344444455579999999994331    124556666777776555

>PRK10671 copA copper exporting ATPase; Provisional

Probab=81.44  E-value=9.7  Score=39.93  Aligned_cols=100  Identities=19%  Similarity=0.220  Sum_probs=67.6

Q ss_pred             ccEEEEeccceee----cCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHH-HHH
Q 021350           30 FKAWLLDQFGVLH----DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL-THQ  104 (313)
Q Consensus        30 ~k~iifDlDGTL~----~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~-~~~  104 (313)
                      ...+.+-.||++.    -.+++.|++.+.++.|++.|+++.++|+  .........++++|++... .++...... ..+
T Consensus       630 ~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tg--d~~~~a~~ia~~lgi~~~~-~~~~p~~K~~~i~  706 (834)
T PRK10671        630 ATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTG--DNPTTANAIAKEAGIDEVI-AGVLPDGKAEAIK  706 (834)
T ss_pred             CeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcC--CCHHHHHHHHHHcCCCEEE-eCCCHHHHHHHHH
Confidence            4567777787744    4677889999999999999999999994  4455566677789997433 444322221 222


Q ss_pred             HHHhcCchhhhhcCCeEEEeecCcccchhhccCCcc
Q 021350          105 YLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLK  140 (313)
Q Consensus       105 ~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~  140 (313)
                      .+.+.        +.++.+++-+.++...+...|+-
T Consensus       707 ~l~~~--------~~~v~~vGDg~nD~~al~~Agvg  734 (834)
T PRK10671        707 RLQSQ--------GRQVAMVGDGINDAPALAQADVG  734 (834)
T ss_pred             HHhhc--------CCEEEEEeCCHHHHHHHHhCCee
Confidence            22221        56788888888877777777653

>PRK09449 dUMP phosphatase; Provisional

Probab=81.28  E-value=1.8  Score=37.15  Aligned_cols=48  Identities=27%  Similarity=0.373  Sum_probs=35.7

Q ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~   98 (313)
                      ++|++.+.|+.|+ .|+++.++||+.  .......++.+|+.... +.++++
T Consensus        96 ~~~g~~~~L~~L~-~~~~~~i~Tn~~--~~~~~~~l~~~~l~~~f-d~v~~~  143 (224)
T PRK09449         96 PLPGAVELLNALR-GKVKMGIITNGF--TELQQVRLERTGLRDYF-DLLVIS  143 (224)
T ss_pred             cCccHHHHHHHHH-hCCeEEEEeCCc--HHHHHHHHHhCChHHHc-CEEEEE
Confidence            5788999999999 679999999865  34445567888886544 555554

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=80.75  E-value=2.4  Score=40.07  Aligned_cols=50  Identities=14%  Similarity=0.189  Sum_probs=39.3

Q ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~   99 (313)
                      ++||+.++|+.|++.|+++.++||+.  ...+...++.+|+.... +.++++.
T Consensus       217 l~pGa~ElL~~Lk~~GiklaIaSn~~--~~~~~~~L~~lgL~~yF-d~Iv~sd  266 (381)
T PLN02575        217 LRTGSQEFVNVLMNYKIPMALVSTRP--RKTLENAIGSIGIRGFF-SVIVAAE  266 (381)
T ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCC--HHHHHHHHHHcCCHHHc-eEEEecC
Confidence            56899999999999999999999654  55666778888987555 6666543

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=80.62  E-value=12  Score=38.89  Aligned_cols=115  Identities=17%  Similarity=0.220  Sum_probs=77.4

Q ss_pred             cCccEEEEeccceeec----CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHH-H
Q 021350           28 RRFKAWLLDQFGVLHD----GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL-T  102 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~----~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~-~  102 (313)
                      +...++.+=+||+|.-    ++++=|++..++..|++.|+++.++|  |-.........++.|++.-. .++...... .
T Consensus       701 ~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLT--GDn~~aA~svA~~VGi~~V~-aev~P~~K~~~  777 (951)
T KOG0207|consen  701 KGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLT--GDNDAAARSVAQQVGIDNVY-AEVLPEQKAEK  777 (951)
T ss_pred             cCceEEEEEECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEc--CCCHHHHHHHHHhhCcceEE-eccCchhhHHH
Confidence            3677899999999876    67788999999999999999999999  54455555666778876544 566555443 3


Q ss_pred             HHHHHhcCchhhhhcCCeEEEeecCcccchhhccC--CccccC----CCCCCCEEEe
Q 021350          103 HQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGL--GLKVVE----NVEEADFILA  153 (313)
Q Consensus       103 ~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~--g~~~~~----~~~~~~~~~~  153 (313)
                      .+.+.+.        |..+..++-+.+....|...  |+.+..    -.+.+|++++
T Consensus       778 Ik~lq~~--------~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLm  826 (951)
T KOG0207|consen  778 IKEIQKN--------GGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLM  826 (951)
T ss_pred             HHHHHhc--------CCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEE
Confidence            3334333        35667777788777655543  433221    1244566666

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=80.58  E-value=2.9  Score=36.75  Aligned_cols=59  Identities=14%  Similarity=0.109  Sum_probs=44.3

Q ss_pred             EEEEeccceeecCCcc---------------------------------Ccc--HHHHHHHHHHCCCcEEEEeCCCCC-c
Q 021350           32 AWLLDQFGVLHDGKKP---------------------------------YPG--AISTLEMLATTGAKMVVISNSSRR-A   75 (313)
Q Consensus        32 ~iifDlDGTL~~~~~~---------------------------------~~~--a~~~l~~l~~~g~~~~~~Tn~~~~-~   75 (313)
                      +|+||+||||+++...                                 +|.  +.++|+.++++|+++.++||.... .
T Consensus        65 aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~  144 (237)
T TIGR01672        65 AVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKT  144 (237)
T ss_pred             EEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcC
Confidence            9999999999996551                                 111  778899999999999999986543 3


Q ss_pred             hHH-HHHHHhCCCCCc
Q 021350           76 STT-IDKLKSLGFDPS   90 (313)
Q Consensus        76 ~~~-~~~l~~~G~~~~   90 (313)
                      +.. ...++.+|++..
T Consensus       145 ~~~a~~ll~~lGi~~~  160 (237)
T TIGR01672       145 DTVSKTLAKNFHIPAM  160 (237)
T ss_pred             HHHHHHHHHHhCCchh
Confidence            444 444567999753

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=80.23  E-value=13  Score=38.01  Aligned_cols=91  Identities=11%  Similarity=0.066  Sum_probs=57.2

Q ss_pred             CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      ...++.+++++.|++.|++. .+|.+...            +-.+.-..+|... ++.--.|+-=..+.+.+.-.-+-+.
T Consensus       441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~------------TA~aIA~elGI~~-v~A~~~PedK~~iV~~lQ~~G~~Va  507 (673)
T PRK14010        441 VIKDGLVERFRELREMGIETVMCTGDNEL------------TAATIAKEAGVDR-FVAECKPEDKINVIREEQAKGHIVA  507 (673)
T ss_pred             CCcHHHHHHHHHHHHCCCeEEEECCCCHH------------HHHHHHHHcCCce-EEcCCCHHHHHHHHHHHHhCCCEEE
Confidence            34589999999999999988 56654331            1112222345433 2233345555555555543335688


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGI  274 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~  274 (313)
                      |+||.. ||--+.++|.+ +|.+.+|.
T Consensus       508 MtGDGv-NDAPALa~ADV-GIAMgsGT  532 (673)
T PRK14010        508 MTGDGT-NDAPALAEANV-GLAMNSGT  532 (673)
T ss_pred             EECCCh-hhHHHHHhCCE-EEEeCCCC
Confidence            999997 99999999984 45555543

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=80.08  E-value=2.8  Score=35.82  Aligned_cols=51  Identities=22%  Similarity=0.387  Sum_probs=39.8

Q ss_pred             CccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (313)
Q Consensus        45 ~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~   99 (313)
                      .+++|++.++|++|++. +++.++||+.  ...+...++.+|+.... +.++++.
T Consensus        96 ~~~~~g~~~~L~~l~~~-~~~~i~Sn~~--~~~~~~~l~~~~l~~~f-d~i~~~~  146 (224)
T TIGR02254        96 HQLLPGAFELMENLQQK-FRLYIVTNGV--RETQYKRLRKSGLFPFF-DDIFVSE  146 (224)
T ss_pred             CeeCccHHHHHHHHHhc-CcEEEEeCCc--hHHHHHHHHHCCcHhhc-CEEEEcC
Confidence            35789999999999999 9999999865  45556678888987655 6666553

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=80.05  E-value=4.1  Score=35.31  Aligned_cols=52  Identities=29%  Similarity=0.422  Sum_probs=40.9

Q ss_pred             ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHH
Q 021350           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (313)
Q Consensus        46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~  100 (313)
                      +++||+.++++.|+++|+++..+||+.  .......|+..|+.... +.++++..
T Consensus        86 ~~~pGv~~~l~~L~~~~i~~avaS~s~--~~~~~~~L~~~gl~~~f-~~~v~~~d  137 (221)
T COG0637          86 KPIPGVVELLEQLKARGIPLAVASSSP--RRAAERVLARLGLLDYF-DVIVTADD  137 (221)
T ss_pred             CCCccHHHHHHHHHhcCCcEEEecCCh--HHHHHHHHHHccChhhc-chhccHHH
Confidence            678999999999999999998888543  55667778888987666 66666653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	313
2hx1_A	284	Crystal Structure Of Possible Sugar Phosphatase, Ha		8e-11
3qgm_A	268	P-Nitrophenyl Phosphatase From Archaeoglobus Fulgid		5e-10
3pdw_A	266	Crystal Structure Of Putative P-Nitrophenyl Phospha		3e-09
2cfs_A	298	Crystal Structure Of Human Pyridoxal 5'-Phosphate P		4e-08
2cfr_A	298	Crystal Structure Of Human Pyridoxal 5'-Phosphate P		1e-07
2oyc_A	306	Crystal Structure Of Human Pyridoxal Phosphate Phos		1e-07
1pw5_A	253	Putative Nagd Protein Length = 253		6e-07
1vjr_A	271	Crystal Structure Of 4-nitrophenylphosphatase (tm17		7e-07
1yv9_A	264	Crystal Structure Of A Had-Like Phosphatase From En		2e-05
2c4n_A	250	Nagd From E.Coli K-12 Strain Length = 250		5e-05
3ib6_A	189	Crystal Structure Of An Uncharacterized Protein Fro		2e-04
2hoq_A	241	Crystal Structure Of The Probable Haloacid Dehaloge		5e-04
1ys9_A	254	Crystal Sructure Of Phosphatase Spy1043 From Strept		5e-04

>pdb|2HX1|A Chain A, Crystal Structure Of Possible Sugar Phosphatase, Had Superfamily (Zp_00311070.1) From Cytophaga Hutchinsonii Atcc 33406 At 2.10 A Resolution Length = 284

Iteration: 1
 Score = 64.3 bits (155), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 106/256 (41%), Gaps = 24/256 (9%)
Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTI-DKLKSLGF 87
           ++K    D FGVL       PG  +T + L   G    +++N + R+   + D    LG 
Sbjct: 13  KYKCIFFDAFGVLKTYNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGL 72
Query: 88  DPSLFAGAITSGELTHQYL-LRRDDAWFAALGR-SCIHMTWSDRGAISLEGLGLKVVE-- 143
                   I+SG +T +Y+ L+ D    A LG  +  +   SD     ++ L +  ++  
Sbjct: 73  FSITADKIISSGXITKEYIDLKVDGGIVAYLGTANSANYLVSD----GIKXLPVSAIDDS 128
Query: 144 NVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARA- 202
           N+ E + ++    EG              DL K + +   + IP +VAN D      +  
Sbjct: 129 NIGEVNALVLLDDEGFNW---------FHDLNKTVNLLRKRTIPAIVANTDNTYPLTKTD 179
Query: 203 LRVMPGTLASKFEK-LGGEVRWMGKPDK----IIYKSAMAMVGVDACDSIAVGDSLHHDI 257
           + +  G +A+  E  LG      GKPD       Y        +   + + VGD+LH DI
Sbjct: 180 VAIAIGGVATXIESILGRRFIRFGKPDSQXFXFAYDXLRQKXEISKREILXVGDTLHTDI 239
Query: 258 KGANAAGIQSVFIIGG 273
            G N  G+ +  ++ G
Sbjct: 240 LGGNKFGLDTALVLTG 255

>pdb|3QGM|A Chain A, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus Length = 268

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 48/291 (16%)
Query: 31  KAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTI-DKLKSLGFDP 89
           K +++D  GV+     P P  +  ++ L   G K++ +SN+S R+   + ++L+S G + 
Sbjct: 9   KGYIIDIDGVIGKSVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE- 67
Query: 90  SLFAGAITSGE---LTHQYLLRRDDAWFAALGRSCIHMTWSDRGAIS-LEGLGLKVVENV 145
                    GE   L   Y   R   + A    +    T  + G I  L   GL++V + 
Sbjct: 68  --------VGEDEILVATYATAR---FIAREKPNAKVFTTGEEGLIEELRLAGLEIV-DY 115
Query: 146 EEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRV 205
           +EA++++           G  R ++ +   K L  C  + I  +  NPD +         
Sbjct: 116 DEAEYLVV----------GSNRKINFELXTKALRACL-RGIRYIATNPDRIFPAEDG--P 162
Query: 206 MPGT---LASKFEKLGGEVRWM-GKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGAN 261
           +PGT   + + +   G E   + GKP ++I + A+ ++G+DA D   VGD +  D+    
Sbjct: 163 IPGTGXIIGALYWXTGREPDVVVGKPSEVIXREALDILGLDAKDVAVVGDQIDVDVAAGK 222
Query: 262 AAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS 312
           A G ++V ++ G+   E             ++   + ++   P YV  S  
Sbjct: 223 AIGAETVLVLTGVTTRE-------------NLDQXIERHGLKPDYVFNSLK 260

>pdb|3PDW|A Chain A, Crystal Structure Of Putative P-Nitrophenyl Phosphatase From Bacillus Subtilis Length = 266

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 27/255 (10%)
Query: 28  RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAK-MVVISNSSRRASTTIDKLKSLG 86
           + +K +L+D  G +++G +    A   +  L   G   + V +NSSR      DKL S  
Sbjct: 4   KTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVS-- 61
Query: 87  FD-PSLFAGAITSGELTHQYLLR-RDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVEN 144
           FD P+      T+   T Q++ + + DA    +G   I      R AI   GL       
Sbjct: 62  FDIPATEEQVFTTSMATAQHIAQQKKDASVYVIGEEGI------RQAIEENGLTF----G 111
Query: 145 VEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALR 204
            E ADF++      +      V  +++++  + +       IP             R L 
Sbjct: 112 GENADFVVVGIDRSITYEKFAVGCLAIRNGARFISTNGDIAIPT-----------ERGLL 160
Query: 205 VMPGTLASKFE-KLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAA 263
              G+L S      G +  ++GKP+ II + AM ++G D  +++ VGD+   DI     A
Sbjct: 161 PGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINA 220
Query: 264 GIQSVFIIGGIHATE 278
           G+ ++ +  G+   E
Sbjct: 221 GMDTLLVHTGVTKRE 235

>pdb|2CFS|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate Phosphatase Length = 298

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 107/266 (40%), Gaps = 34/266 (12%)
Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
           R +  L D  GVL +G++  PGA   LE LA  G   + +SN+SRRA   +  +   LGF
Sbjct: 20  RAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGF 79
Query: 88  D----PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVE 143
                  LF+ A+ +  L  Q L    DA  A                  L G GL+   
Sbjct: 80  GGLRAEQLFSSALCAARLLRQRLPGPPDAPGA---------------VFVLGGEGLRA-- 122
Query: 144 NVEEADFILAHGTEGMGLPSGDVRPMSLQ-----DLEKILEICASKKIP---MVVANPDY 195
            +  A   LA         +  VR + +         K+ E CA  + P   +V  + D 
Sbjct: 123 ELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDP 182
Query: 196 VTVEARALRVMPGT--LASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDS 252
               +   R  PGT  LA+  E   G +   +GKP   +++       +D   ++ VGD 
Sbjct: 183 WHPLSDGSRT-PGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDR 241
Query: 253 LHHDIKGANAAGIQSVFIIGGIHATE 278
           L  DI   +  G+ +V  + G+   E
Sbjct: 242 LETDILFGHRCGMTTVLTLTGVSRLE 267

>pdb|2CFR|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate Phosphatase Length = 298

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 105/266 (39%), Gaps = 34/266 (12%)
Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
           R +  L D  GVL +G++  PGA   LE LA  G   + +SN+SRRA   +  +   LGF
Sbjct: 20  RAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGF 79
Query: 88  D----PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVE 143
                  LF+ A+ +  L  Q L    DA  A                  L G GL+   
Sbjct: 80  GGLRAEQLFSSALCAARLLRQRLPGPPDAPGA---------------VFVLGGEGLRA-- 122
Query: 144 NVEEADFILAHGTEGMGLPSGDVRPMSLQ-----DLEKILEICASKKIP---MVVANPDY 195
            +  A   LA         +  VR + +         K+ E CA  + P   +V  + D 
Sbjct: 123 ELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDP 182
Query: 196 VTVEARALRVMPGT--LASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDS 252
               +   R  PGT  LA+  E   G +   +GKP    ++       +D   ++ VGD 
Sbjct: 183 WHPLSDGSRT-PGTGSLAAAVETASGRQALVVGKPSPYXFECITENFSIDPARTLXVGDR 241
Query: 253 LHHDIKGANAAGIQSVFIIGGIHATE 278
           L  DI   +  G  +V  + G+   E
Sbjct: 242 LETDILFGHRCGXTTVLTLTGVSRLE 267

>pdb|2OYC|A Chain A, Crystal Structure Of Human Pyridoxal Phosphate Phosphatase Length = 306

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 105/266 (39%), Gaps = 34/266 (12%)
Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
           R +  L D  GVL +G++  PGA   LE LA  G   + +SN+SRRA   +  +   LGF
Sbjct: 20  RAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGF 79
Query: 88  D----PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVE 143
                  LF+ A+ +  L  Q L    DA  A                  L G GL+   
Sbjct: 80  GGLRAEQLFSSALCAARLLRQRLPGPPDAPGA---------------VFVLGGEGLRA-- 122
Query: 144 NVEEADFILAHGTEGMGLPSGDVRPMSLQ-----DLEKILEICASKKIP---MVVANPDY 195
            +  A   LA         +  VR + +         K+ E CA  + P   +V  + D 
Sbjct: 123 ELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDP 182
Query: 196 VTVEARALRVMPGT--LASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDS 252
               +   R  PGT  LA+  E   G +   +GKP    ++       +D   ++ VGD 
Sbjct: 183 WHPLSDGSRT-PGTGSLAAAVETASGRQALVVGKPSPYXFECITENFSIDPARTLXVGDR 241
Query: 253 LHHDIKGANAAGIQSVFIIGGIHATE 278
           L  DI   +  G  +V  + G+   E
Sbjct: 242 LETDILFGHRCGXTTVLTLTGVSRLE 267

>pdb|1PW5|A Chain A, Putative Nagd Protein Length = 253

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 26/249 (10%)
Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLGF 87
           + + ++LD  G  +      PG++  LE L     + V  +N SS  A   + KL++ G 
Sbjct: 4   KIELFILDXDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNXGV 63
Query: 88  D-PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVE 146
           D P      +TSGE+T ++ L+R        GR  I +  + +     E  G  + E  E
Sbjct: 64  DVPD--DAVVTSGEITAEHXLKR-------FGRCRIFLLGTPQLKKVFEAYGHVIDE--E 112
Query: 147 EADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVM 206
             DF++           G  + ++ + L+K   +    K   +  +PD            
Sbjct: 113 NPDFVVL----------GFDKTLTYERLKKACILLRKGKF-YIATHPDINCPSKEGPVPD 161
Query: 207 PGTLASKFEKLGGEVRWM--GKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAG 264
            G++ +  E   G    +  GKP+ ++        GV       VGD L+ D+K    AG
Sbjct: 162 AGSIXAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERXAXVGDRLYTDVKLGKNAG 221
Query: 265 IQSVFIIGG 273
           I S+ ++ G
Sbjct: 222 IVSILVLTG 230

>pdb|1VJR|A Chain A, Crystal Structure Of 4-nitrophenylphosphatase (tm1742) From Thermotoga Maritima At 2.40 A Resolution Length = 271

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 26/249 (10%)
Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLGF 87
           + + ++LD  G  +      PG++  LE L     + V  +N SS  A   + KL++ G 
Sbjct: 16  KIELFILDXDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNXGV 75
Query: 88  D-PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVE 146
           D P      +TSGE+T ++ L+R        GR  I +  + +     E  G  + E  E
Sbjct: 76  DVPD--DAVVTSGEITAEHXLKR-------FGRCRIFLLGTPQLKKVFEAYGHVIDE--E 124
Query: 147 EADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVM 206
             DF++           G  + ++ + L+K   +    K   +  +PD            
Sbjct: 125 NPDFVVL----------GFDKTLTYERLKKACILLRKGKF-YIATHPDINCPSKEGPVPD 173
Query: 207 PGTLASKFEKLGGEVRWM--GKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAG 264
            G++ +  E   G    +  GKP+ ++        GV       VGD L+ D+K    AG
Sbjct: 174 AGSIXAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERXAXVGDRLYTDVKLGKNAG 233
Query: 265 IQSVFIIGG 273
           I S+ ++ G
Sbjct: 234 IVSILVLTG 242

>pdb|1YV9|A Chain A, Crystal Structure Of A Had-Like Phosphatase From Enterococcus Faecalis V583 Length = 264

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 106/253 (41%), Gaps = 36/253 (14%)
Query: 30  FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89
           ++ +L+D  G ++ GK+P P     +E L       + ++N++ ++  T+ +  +  FD 
Sbjct: 5   YQGYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDI 64
Query: 90  SLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEA- 148
            + A  + +  L                  +  +M  ++RG         K V  + EA 
Sbjct: 65  HVPASLVYTATLA-----------------TIDYMKEANRG---------KKVFVIGEAG 98
Query: 149 --DFILAHGTE-GMGLPSGDVRPMSLQ-DLEKIL--EICASKKIPMVVANPDYVTVEARA 202
             D IL  G E     P   V  +  +   EK++   +   K    +  NPD      R 
Sbjct: 99  LIDLILEAGFEWDETNPDYVVVGLDTELSYEKVVLATLAIQKGALFIGTNPDKNIPTERG 158
Query: 203 LRVMPGTLASKFEKLGGEVR--WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGA 260
           L    G++ + F +   + +  ++GKP  II + A+A +GV+    I VGD+   DI+  
Sbjct: 159 LLPGAGSVVT-FVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSG 217
Query: 261 NAAGIQSVFIIGG 273
              GI S+ +  G
Sbjct: 218 IQNGIDSLLVTSG 230

>pdb|2C4N|A Chain A, Nagd From E.Coli K-12 Strain Length = 250

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/253 (22%), Positives = 104/253 (41%), Gaps = 33/253 (13%)
Query: 31  KAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLGFD- 88
           K  + D  GVL       PGA   L  +   G  +V+++N  S+      ++  + G D 
Sbjct: 4   KNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDV 63
Query: 89  -PSLFAGAITSGELTHQYLLRRDDAWFAALGR-SCIHMTWSDRGAISLEGLGLKVVENVE 146
             S+F    TS   T  +L R++      +G  + IH          L   G  + +   
Sbjct: 64  PDSVF---YTSAMATADFLRRQEGKKAYVVGEGALIH---------ELYKAGFTITD--V 109
Query: 147 EADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVM 206
             DF++           G+ R  +   + K     A+     +  NPD      R     
Sbjct: 110 NPDFVIV----------GETRSYNWDMMHKAAYFVANGA-RFIATNPD---THGRGFYPA 155
Query: 207 PGTLASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGI 265
            G L +  EK+ G +  ++GKP   I ++A+  +   + +++ VGD+L  DI     AG+
Sbjct: 156 CGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGL 215
Query: 266 QSVFIIGGIHATE 278
           +++ ++ G+ + +
Sbjct: 216 ETILVLSGVSSLD 228

>pdb|3IB6|A Chain A, Crystal Structure Of An Uncharacterized Protein From Listeria Monocytogenes Serotype 4b Length = 189

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFI 270
           M KPDK I+   +  + +D  +++ VG++   DI GAN AGI ++++
Sbjct: 95  MEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWL 141

>pdb|2HOQ|A Chain A, Crystal Structure Of The Probable Haloacid Dehalogenase (Ph1655) From Pyrococcus Horikoshii Ot3 Length = 241

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHAT-ELGLD 282
           + KP   I+K A+    V   +++ VGD L+ DI GA   G+++V+   G H+  EL   
Sbjct: 148 VKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYR 207
Query: 283 SYG--EVADLSSVQTLVSK 299
            Y   E+ +L S+  ++++
Sbjct: 208 KYADYEIDNLESLLEVLAR 226

>pdb|1YS9|A Chain A, Crystal Sructure Of Phosphatase Spy1043 From Streptococcus Pyogenes Length = 254

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/261 (19%), Positives = 102/261 (39%), Gaps = 42/261 (16%)
Query: 30  FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89
           +K +L+D  G ++ GK   P     ++ L   G   ++++N++ R    +  +       
Sbjct: 3   YKGYLIDLDGTIYQGKNRIPAGERFIKRLQERGIPYLLVTNNTTRTPEMVQSM------- 55
Query: 90  SLFAGAITSGELTHQYLLRRD-DAWFAALGRSCIHMTWSDRG--AISLEGLGLK------ 140
                      L +Q+ +    +  + A   +  +M   +RG  A  +   GLK      
Sbjct: 56  -----------LANQFHVETSIETIYTATMATVDYMNDMNRGKTAYVIGETGLKSAIAAA 104
Query: 141 -VVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVE 199
             VE +E   +++      +GL S         ++  I  +   K    +  NPD     
Sbjct: 105 GYVEELENPAYVV------VGLDS-----QVTYEMLAIATLAIQKGALFIGTNPDLNIPT 153
Query: 200 ARALRVMPGTLASKFEKLGGEVR--WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDI 257
            R L    G L +  E     V+  ++GKP+ II   ++ ++G+   +++ VGD+   DI
Sbjct: 154 ERGLMPGAGALNALLEA-ATRVKPVFIGKPNAIIMNKSLEVLGIQRSEAVMVGDNYLTDI 212
Query: 258 KGANAAGIQSVFIIGGIHATE 278
                  I ++ +  G    E
Sbjct: 213 MAGIQNDIATILVTTGFTRPE 233

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	313
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	4e-29
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	4e-23
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	2e-22
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	5e-21
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	7e-21
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	2e-19
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	9e-19
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	2e-18
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	3e-18
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	2e-17
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	2e-16
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	1e-15
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	7e-12
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	8e-06
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	1e-11
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	5e-06
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	2e-11
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	4e-11
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	4e-11
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	2e-06
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	5e-11
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	5e-04
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	5e-11
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	5e-05
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	3e-10
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	7e-10
2zg6_A	220	Putative uncharacterized protein ST2620, probable	5e-09
2zg6_A	220	Putative uncharacterized protein ST2620, probable	5e-06
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	2e-08
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	3e-07
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	2e-05
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	4e-07
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	2e-06
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	1e-05
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	2e-05
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	7e-04
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	2e-05
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	2e-05
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	3e-05
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	3e-05
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	3e-05
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	4e-05
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	5e-05
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	7e-05
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	3e-04
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	7e-05
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	3e-04
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	7e-05
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	7e-04
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	8e-05
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	1e-04
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	1e-04
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	2e-04
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	2e-04
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	2e-04
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	2e-04
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	2e-04
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	5e-04
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	2e-04
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	4e-04
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	7e-04
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	7e-04
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	8e-04
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	9e-04

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} Length = 284

 Score =  111 bits (280), Expect = 4e-29
 Identities = 67/303 (22%), Positives = 116/303 (38%), Gaps = 33/303 (10%)

Query: 17  TLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRA 75
            +   + +    ++K    D FGVL       PG  +T + L   G    +++N +SR  
Sbjct: 3   QIESFKSLLP--KYKCIFFDAFGVLKTYNGLLPGIENTFDYLKAQGQDYYIVTNDASRSP 60

Query: 76  STTIDKLKSLGFDPSLFAGAITSGELTHQYL-LRRDDAWFAALGRSCIHMTWSDRGAISL 134
               D    LG         I+SG +T +Y+ L+ D    A LG +         G I +
Sbjct: 61  EQLADSYHKLGLFSITADKIISSGMITKEYIDLKVDGGIVAYLGTANSANYLVSDG-IKM 119

Query: 135 EGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPD 194
             +      N+ E + ++    EG              DL K + +   + IP +VAN D
Sbjct: 120 LPVSAIDDSNIGEVNALVLLDDEGFNWF---------HDLNKTVNLLRKRTIPAIVANTD 170

Query: 195 YVT-VEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMV----GVDACDSIA 248
               +    + +  G +A+  E  LG      GKPD  ++  A  M+     +   + + 
Sbjct: 171 NTYPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKREILM 230

Query: 249 VGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVL 308
           VGD+LH DI G N  G+ +  ++ G    +               +T +      P+++ 
Sbjct: 231 VGDTLHTDILGGNKFGLDTALVLTGNTRID-------------DAETKIKSTGIVPTHIC 277

Query: 309 PSF 311
            S 
Sbjct: 278 ESA 280

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A Length = 259

 Score = 94.9 bits (237), Expect = 4e-23
 Identities = 49/293 (16%), Positives = 89/293 (30%), Gaps = 51/293 (17%)

Query: 25  AETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLK 83
           A  R  KA L+D  G LH      PGA   L+ L  T   +  ++N +       +++LK
Sbjct: 2   AARRALKAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLK 61

Query: 84  SLGFDPSLFAGA---ITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLK 140
            L F+           TS       + ++       L                   L   
Sbjct: 62  KLEFE----ISEDEIFTSLTAARNLIEQKQVRPMLLLDD---------------RALPEF 102

Query: 141 VVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEA 200
                ++ + ++      +GL          Q L +          P++  +        
Sbjct: 103 TGVQTQDPNAVV------IGL---APEHFHYQLLNQAFR-LLLDGAPLIAIHKARYYKRK 152

Query: 201 RALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKG 259
             L + PG   +  E     +   +GKP+K  +  A+        +++ +GD    D+ G
Sbjct: 153 DGLALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDG 212

Query: 260 ANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS 312
           A   G+  + +  G +                       K +  P     SF 
Sbjct: 213 AQNIGMLGILVKTGKYKAA-----------------DEEKINPPPYLTCESFP 248

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* Length = 306

 Score = 94.3 bits (235), Expect = 2e-22
 Identities = 63/297 (21%), Positives = 102/297 (34%), Gaps = 37/297 (12%)

Query: 28  RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLG 86
            R +  L D  GVL +G++  PGA   LE LA  G   + +SN S R       +   LG
Sbjct: 19  GRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLG 78

Query: 87  FDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVE 146
           F         +S     + L +R      A G   +         +  EGL       + 
Sbjct: 79  FGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFV---------LGGEGL----RAELR 125

Query: 147 EADFILAHGTEGMGLPSGDV--------RPMSLQDLEKILEICASKKIPMVVANPDYVTV 198
            A   LA         +  V           S   L +        +  +V  + D    
Sbjct: 126 AAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDPWHP 185

Query: 199 EARALRVMPGT--LASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHH 255
            +      PGT  LA+  E   G +   +GKP   +++       +D   ++ VGD L  
Sbjct: 186 LSDG-SRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLET 244

Query: 256 DIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS 312
           DI   +  G+ +V  + G+   E          +  +      ++D  P Y + S +
Sbjct: 245 DILFGHRCGMTTVLTLTGVSRLE----------EAQAYL-AAGQHDLVPHYYVESIA 290

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} Length = 268

 Score = 89.1 bits (222), Expect = 5e-21
 Identities = 61/294 (20%), Positives = 121/294 (41%), Gaps = 52/294 (17%)

Query: 28  RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLG 86
              K +++D  GV+     P P  +  ++ L   G K++ +SN S+R     +++L+S G
Sbjct: 6   PDKKGYIIDIDGVIGKSVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFG 65

Query: 87  FDPSLFAGA---ITSGELTHQYLLRRDD---AWFAALGRSCIHMTWSDRGAISLEGLGLK 140
            +     G    + +   T +++ R       +    G   +           L   GL+
Sbjct: 66  LE----VGEDEILVATYATARFIAREKPNAKVF--TTGEEGLIE--------ELRLAGLE 111

Query: 141 VVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEA 200
           +V+  +EA++++     G        R ++ + + K L     + I  +  NPD +    
Sbjct: 112 IVDY-DEAEYLVV----GSN------RKINFELMTKAL-RACLRGIRYIATNPDRIFPAE 159

Query: 201 RALRVMPGT--LASKFEK-LGGEVRW-MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHD 256
                +PGT  +        G E    +GKP ++I + A+ ++G+DA D   VGD +  D
Sbjct: 160 DGP--IPGTGMIIGALYWMTGREPDVVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVD 217

Query: 257 IKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPS 310
           +    A G ++V ++ G             V    ++  ++ ++   P YV  S
Sbjct: 218 VAAGKAIGAETVLVLTG-------------VTTRENLDQMIERHGLKPDYVFNS 258

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 Length = 250

 Score = 88.7 bits (221), Expect = 7e-21
 Identities = 54/290 (18%), Positives = 105/290 (36%), Gaps = 54/290 (18%)

Query: 30  FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLGFD 88
            K  + D  GVL       PGA   L  +   G  +V+++N  S+      ++  + G D
Sbjct: 3   IKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62

Query: 89  PSLFAGA---ITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV 145
                      TS   T  +L R++      +G   +           L   G  + +  
Sbjct: 63  ----VPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIH--------ELYKAGFTITD-- 108

Query: 146 EEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRV 205
              DF++           G+ R  +   + K      +     +  NPD           
Sbjct: 109 VNPDFVIV----------GETRSYNWDMMHKAA-YFVANGARFIATNPD-----THGRGF 152

Query: 206 MPGT--LASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANA 262
            P    L +  EK+ G +  ++GKP   I ++A+  +   + +++ VGD+L  DI     
Sbjct: 153 YPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQ 212

Query: 263 AGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS 312
           AG++++ ++ G+ + +                  +      PS++ PS +
Sbjct: 213 AGLETILVLSGVSSLD-----------------DIDSMPFRPSWIYPSVA 245

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} Length = 266

 Score = 85.3 bits (212), Expect = 2e-19
 Identities = 60/293 (20%), Positives = 111/293 (37%), Gaps = 56/293 (19%)

Query: 28  RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLG 86
           + +K +L+D  G +++G +    A   +  L   G   + ++N SSR      DKL S  
Sbjct: 4   KTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFD 63

Query: 87  FDPSLFAGA---ITSGELTHQYLLRRDD---AWFAALGRSCIHMTWSDRGAISLEGLGLK 140
                 A      T+   T Q++ ++      +   +G   I          ++E  GL 
Sbjct: 64  IP----ATEEQVFTTSMATAQHIAQQKKDASVY--VIGEEGIRQ--------AIEENGLT 109

Query: 141 VVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEA 200
                E ADF++     G+       R ++ +       +        +  N D      
Sbjct: 110 FGG--ENADFVVV----GID------RSITYEKFAVGC-LAIRNGARFISTNGDIAIPTE 156

Query: 201 RALRVMPGT--LASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDI 257
           R L  +PG   L S      G +  ++GKP+ II + AM ++G D  +++ VGD+   DI
Sbjct: 157 RGL--LPGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDI 214

Query: 258 KGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPS 310
                AG+ ++ +  G+   E                  ++     P++ + S
Sbjct: 215 MAGINAGMDTLLVHTGVTKRE-----------------HMTDDMEKPTHAIDS 250

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} PDB: 1ys9_A 1wvi_A 1ydf_A Length = 264

 Score = 83.0 bits (206), Expect = 9e-19
 Identities = 51/294 (17%), Positives = 101/294 (34%), Gaps = 56/294 (19%)

Query: 27  TRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSL 85
           +  +K +L+D  G ++ GK   P     +E L   G   ++++N ++R   +  + L+  
Sbjct: 2   SLAYKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGF 61

Query: 86  GFDPSLFAGA---ITSGELTHQYLLRRDD---AWFAALGRSCIHMTWSDRGAISLEGLGL 139
             +           T+   T  Y+   +    A+   +G   +          ++   G 
Sbjct: 62  NVE----TPLETIYTATMATVDYMNDMNRGKTAY--VIGEEGLKK--------AIADAGY 107

Query: 140 KVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVE 199
                 +   +++     G+         ++   L     +        +  NPD     
Sbjct: 108 VEDT--KNPAYVVV----GLD------WNVTYDKLATAT-LAIQNGALFIGTNPDLNIPT 154

Query: 200 ARALRVMPGT--LASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHD 256
            R L  +PG   L +  E     +  ++GKP+ II   A+ ++ +    ++ VGD+   D
Sbjct: 155 ERGL--LPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTD 212

Query: 257 IKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPS 310
           I       I ++ +  G    E                  V      PSYVL S
Sbjct: 213 IMAGINNDIDTLLVTTGFTTVE-----------------EVPDLPIQPSYVLAS 249

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* Length = 271

 Score = 82.6 bits (205), Expect = 2e-18
 Identities = 61/294 (20%), Positives = 109/294 (37%), Gaps = 57/294 (19%)

Query: 28  RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLG 86
            + + ++LD  G  +      PG++  LE L     + V  +N SS  A   + KL+++G
Sbjct: 15  DKIELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMG 74

Query: 87  FDPSLFAGA---ITSGELTHQYLLRRDD---AWFAALGRSCIHMTWSDRGAISLEGLGLK 140
            D          +TSGE+T +++L+R      +   LG   +            E  G  
Sbjct: 75  VD----VPDDAVVTSGEITAEHMLKRFGRCRIF--LLGTPQLKK--------VFEAYGHV 120

Query: 141 VVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEA 200
           + E  E  DF++     G        + ++ + L+K   I   K    +  +PD      
Sbjct: 121 IDE--ENPDFVVL----GFD------KTLTYERLKKAC-ILLRKGKFYIATHPDINCPSK 167

Query: 201 RALRVMPGT--LASKFEK-LGGEVRW-MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHD 256
                +P    + +  E   G +     GKP+ ++        GV       VGD L+ D
Sbjct: 168 EGP--VPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTD 225

Query: 257 IKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPS 310
           +K    AGI S+ ++ G    E                  + + +  P +V  +
Sbjct: 226 VKLGKNAGIVSILVLTGETTPE-----------------DLERAETKPDFVFKN 262

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} Length = 271

 Score = 81.8 bits (203), Expect = 3e-18
 Identities = 46/296 (15%), Positives = 95/296 (32%), Gaps = 57/296 (19%)

Query: 28  RRFKAWLLDQFGVLH----DGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKL 82
              +  LLD  GVL+     G     G++  +  L  +  K+   +N S+   +  + +L
Sbjct: 10  AGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQL 69

Query: 83  KSLGFDPSLFAGA---ITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAIS-LEGLG 138
           + LGFD                  Q L  R    +  L            G  S  + + 
Sbjct: 70  QRLGFD----ISEQEVTAPAPAACQILKERGLRPYL-LI---------HDGVRSEFDQID 115

Query: 139 LKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVA-NPDYVT 197
                     + ++                 S Q++    ++    + P++++       
Sbjct: 116 ------TSNPNCVVIADAG---------ESFSYQNMNNAFQVLMELEKPVLISLGKGRYY 160

Query: 198 VEARALRVMPGTLASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHD 256
                L +  G      E   G +   +GKP    +KSA+  +GV+A  ++ +GD +  D
Sbjct: 161 AATSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGD 220

Query: 257 IKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS 312
           + GA   G++++ +  G                           +      + + +
Sbjct: 221 VGGAQRCGMRALQVRTGKFRPS-----------------DEHHPEVKADGYVDNLA 259

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 Length = 264

 Score = 79.5 bits (197), Expect = 2e-17
 Identities = 55/295 (18%), Positives = 105/295 (35%), Gaps = 57/295 (19%)

Query: 27  TRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKL-KS 84
           +  ++ +L+D  G ++ GK+P P     +E L       + ++N +++   T   +L   
Sbjct: 2   SLDYQGYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANE 61

Query: 85  LGFDPSLFAGA---ITSGELTHQYLLRRDD---AWFAALGRSCIHMTWSDRGAISLEGLG 138
                     A    T+   T  Y+   +     +   +G + +           +   G
Sbjct: 62  FDIH----VPASLVYTATLATIDYMKEANRGKKVF--VIGEAGLID--------LILEAG 107

Query: 139 LKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTV 198
            +  E     D+++     G+         +S + +     +   K    +  NPD    
Sbjct: 108 FEWDE--TNPDYVVV----GLD------TELSYEKVVLAT-LAIQKGALFIGTNPDKNIP 154

Query: 199 EARALRVMPGT--LASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHH 255
             R L  +PG   + +  E     +  ++GKP  II + A+A +GV+    I VGD+   
Sbjct: 155 TERGL--LPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYET 212

Query: 256 DIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPS 310
           DI+     GI S+ +  G                       V      P+YV+ S
Sbjct: 213 DIQSGIQNGIDSLLVTSGFTPKS-----------------AVPTLPTPPTYVVDS 250

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} Length = 263

 Score = 76.8 bits (190), Expect = 2e-16
 Identities = 59/298 (19%), Positives = 105/298 (35%), Gaps = 65/298 (21%)

Query: 31  KAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLGFDP 89
            A + D  GVL+ G +  PG    +E L   G     ++N S++      +KL  +G D 
Sbjct: 2   VAIIFDMDGVLYRGNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGID- 60

Query: 90  SLFAGA---ITSGELTHQYLLRRDD---AWFAALGRSCIHMTWSDRGAISLEGLGLKVVE 143
                +   ITSG  T  Y+ +  D    +                  I  EGL    V+
Sbjct: 61  ---VSSSIIITSGLATRLYMSKHLDPGKIF-----------------VIGGEGL----VK 96

Query: 144 NVEEADFILAHGTEGMGLPSGDV--------RPMSLQDLEKILEICASKKIPMVVANPDY 195
            ++   + +    E       +V          ++ + L+    +        +  NPD 
Sbjct: 97  EMQALGWGIVTLDEARQGSWKEVKHVVVGLDPDLTYEKLKYAT-LAIRNGATFIGTNPDA 155

Query: 196 VTVEARALRVMPGT--LASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDS 252
                  +   PG   + +  +     E   +GKP++ +Y+    M   +      VGD 
Sbjct: 156 TLPGEEGI--YPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREMFPGEEL--WMVGDR 211

Query: 253 LHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPS 310
           L  DI  A   G++++ ++ G+ + E                  + K +  P  VLPS
Sbjct: 212 LDTDIAFAKKFGMKAIMVLTGVSSLE-----------------DIKKSEYKPDLVLPS 252

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* Length = 352

 Score = 75.2 bits (184), Expect = 1e-15
 Identities = 50/323 (15%), Positives = 86/323 (26%), Gaps = 66/323 (20%)

Query: 18  LNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRAS 76
           + G R    T +  A+  D  GVL  GKKP  GA   L++L       ++++N       
Sbjct: 1   MIGKRFFQTTSKKIAFAFDIDGVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSER 60

Query: 77  TTIDKL-KSLGFDPSLFAGAITSGELTHQYLLRRDDAWF-------AALGRSCIHMTWSD 128
              + +   L  D S     I S       + +                           
Sbjct: 61  ARTEFISSKLDVDVSP-LQIIQSHTPYKSLVNKYSRILAVGTPSVRGVAEGYGFQDVVHQ 119

Query: 129 RGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSL------QDLEKILEICA 182
              +             +E     +     +     D   +         D++ I +   
Sbjct: 120 TDIVRYNRDIAPFSGLSDEQVMEYSRDIPDLTTKKFDAVLVFNDPHDWAADIQIISDAIN 179

Query: 183 S---------------KKIPMVVANPDYVTVEAR--------ALRVMPGTLASKFEKLGG 219
           S                 IP+  +N D +             A R++   L  +      
Sbjct: 180 SENGMLNTLRNEKSGKPSIPIYFSNQDLLWANPYKLNRFGQGAFRLLVRRLYLELNGEPL 239

Query: 220 EVRWMGKPDKIIYKSAMAMVGVDACDS---------------------------IAVGDS 252
           +   +GKP K+ Y  A  ++                                    VGD+
Sbjct: 240 QDYTLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDN 299

Query: 253 LHHDIKGANAAGIQSVFIIGGIH 275
              DI GA   G  S  +  G++
Sbjct: 300 PASDIIGAQNYGWNSCLVKTGVY 322

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235

 Score = 63.3 bits (154), Expect = 7e-12
 Identities = 23/130 (17%), Positives = 54/130 (41%), Gaps = 4/130 (3%)

Query: 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL--GGEVRWMGKP 227
           L+  ++ L+    + +   V+ N  +       L +    L    +K     EV    KP
Sbjct: 101 LEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLS-YKP 159

Query: 228 DKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEV 287
            K +++  +    V   +S+ +GD+   D +GA   G+ +V+I           +   E+
Sbjct: 160 RKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEI 219

Query: 288 ADLSSVQTLV 297
             +++++ ++
Sbjct: 220 PSIANLKDVI 229

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235

 Score = 45.2 bits (107), Expect = 8e-06
 Identities = 13/71 (18%), Positives = 20/71 (28%), Gaps = 2/71 (2%)

Query: 32  AWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLGFDPS 90
                +  +  D      G    L+ +   G K  VI N      S T   L+  G    
Sbjct: 85  KRATARAILNVDESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLME- 143

Query: 91  LFAGAITSGEL 101
                  + E+
Sbjct: 144 FIDKTFFADEV 154

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241

 Score = 62.4 bits (152), Expect = 1e-11
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 3/77 (3%)

Query: 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYG 285
           KP   I+K A+    V   +++ VGD L+ DI GA   G+++V+   G H+         
Sbjct: 150 KPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKY 209

Query: 286 ---EVADLSSVQTLVSK 299
              E+ +L S+  ++++
Sbjct: 210 ADYEIDNLESLLEVLAR 226

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241

 Score = 45.9 bits (109), Expect = 5e-06
 Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 3/59 (5%)

Query: 46  KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQ 104
           +  PGA   L  L   G ++ +I++ +       +K+  L  D   F   I S     +
Sbjct: 94  REVPGARKVLIRLKELGYELGIITDGNPV--KQWEKILRLELDD-FFEHVIISDFEGVK 149

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251

 Score = 61.9 bits (150), Expect = 2e-11
 Identities = 22/139 (15%), Positives = 48/139 (34%), Gaps = 14/139 (10%)

Query: 171 LQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKI 230
           +  + + +   A+    +++   D    E +  +     L+  F ++      + + D  
Sbjct: 114 IAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQS---GLSDLFPRIEV----VSEKDPQ 166

Query: 231 IYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGI-------HATELGLDS 283
            Y   ++   + A   + +G+SL  D++   A G   ++    +       H        
Sbjct: 167 TYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPR 226

Query: 284 YGEVADLSSVQTLVSKYDA 302
             EV D S     V   DA
Sbjct: 227 LREVPDPSGWPAAVRALDA 245

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240

 Score = 60.9 bits (148), Expect = 4e-11
 Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 1/76 (1%)

Query: 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYG 285
           KP   I+  A++    +  +S+ +GDS   DI GA+  G+   F       T        
Sbjct: 162 KPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVT-ERTVFPFQPTY 220

Query: 286 EVADLSSVQTLVSKYD 301
            +  L  +  L+  + 
Sbjct: 221 HIHSLKELMNLLEGHH 236

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189

 Score = 60.2 bits (146), Expect = 4e-11
 Identities = 22/104 (21%), Positives = 46/104 (44%), Gaps = 6/104 (5%)

Query: 173 DLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-----GGEVRWMGK 226
           + ++ LE          +++N      E     +    +   F+ +       +   M K
Sbjct: 38  NAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEK 97

Query: 227 PDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFI 270
           PDK I+   +  + +D  +++ VG++   DI GAN AGI ++++
Sbjct: 98  PDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWL 141

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 16/90 (17%), Positives = 28/90 (31%), Gaps = 6/90 (6%)

Query: 13  HLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-S 71
           H+   +    +     R+    LD +  +         A  TLE +   G K  ++SN +
Sbjct: 5   HVIWDMGETLNTVPNTRYDHHPLDTYPEV----VLRKNAKETLEKVKQLGFKQAILSNTA 60

Query: 72  SRRASTTIDKLKSLGFDPSLFAGAITSGEL 101
           +         L + G     F     S   
Sbjct: 61  TSDTEVIKRVLTNFGIID-YFDFIYASNSE 89

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234

 Score = 60.9 bits (148), Expect = 5e-11
 Identities = 19/77 (24%), Positives = 34/77 (44%)

Query: 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYG 285
           KP   I++ A+   GV   +++ VGD+   D  G+   G+ S+ +       E       
Sbjct: 155 KPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDF 214

Query: 286 EVADLSSVQTLVSKYDA 302
            V+DL  V  +V + + 
Sbjct: 215 IVSDLREVIKIVDELNG 231

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234

 Score = 39.7 bits (93), Expect = 5e-04
 Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 4/64 (6%)

Query: 38  FGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAIT 97
             +     + YP  +  L+ L      + +I++S       +  L +LG    LF    T
Sbjct: 92  LRMSQRYGELYPEVVEVLKSLK-GKYHVGMITDSD--TEQAMAFLDALGIKD-LFDSITT 147

Query: 98  SGEL 101
           S E 
Sbjct: 148 SEEA 151

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263

 Score = 61.0 bits (148), Expect = 5e-11
 Identities = 28/137 (20%), Positives = 55/137 (40%), Gaps = 13/137 (9%)

Query: 173 DLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGT-LASKFEK--LGGEVRWMGKPD 228
             E  L  C ++ + + V++N D      R   ++ G  L   F+         W  KPD
Sbjct: 110 GAEDTLRECRTRGLRLAVISNFD-----RRLEGILGGLGLREHFDFVLTSEAAGW-PKPD 163

Query: 229 KIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYG--- 285
             I++ A+ +  ++   +  VGD+   D +G  A G+ S  ++G      +  DS     
Sbjct: 164 PRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEH 223

Query: 286 EVADLSSVQTLVSKYDA 302
            +  L+ +   +   + 
Sbjct: 224 ILPSLAHLLPALDCLEG 240

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263

 Score = 43.2 bits (102), Expect = 5e-05
 Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 4/60 (6%)

Query: 42  HDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL 101
               +   GA  TL    T G ++ VISN  RR       L  LG     F   +TS   
Sbjct: 102 PCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR---LEGILGGLGLRE-HFDFVLTSEAA 157

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238

 Score = 58.2 bits (141), Expect = 3e-10
 Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 1/74 (1%)

Query: 226 KPDKIIYKSAM-AMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSY 284
           KP K  +      +    A  ++ +GDSL  DIKG   AG+ + ++   +      +   
Sbjct: 158 KPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPT 217

Query: 285 GEVADLSSVQTLVS 298
            E+  L  +  +++
Sbjct: 218 YEIRKLEELYHILN 231

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260

 Score = 57.5 bits (139), Expect = 7e-10
 Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 2/79 (2%)

Query: 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFII--GGIHATELGLDS 283
           KP   I+     ++GV   D + VGD+L  DI+G   AG+++   I   G          
Sbjct: 176 KPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMP 235

Query: 284 YGEVADLSSVQTLVSKYDA 302
           +  V+ +  +  L+   D 
Sbjct: 236 HYMVSSVLELPALLQSIDC 254

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220

 Score = 54.7 bits (132), Expect = 5e-09
 Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 17/131 (12%)

Query: 173 DLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGT-LASKFEK--LGGEVRWMGKPD 228
           D  + LE   S    + +V+N        R   ++    L   F+   L  E++   KP+
Sbjct: 99  DTLEFLEGLKSNGYKLALVSNAS-----PRVKTLLEKFDLKKYFDALALSYEIKA-VKPN 152

Query: 229 KIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVA 288
             I+  A+A VG  A   + VGD    D  GA  + +  +     +   +   D    V 
Sbjct: 153 PKIFGFALAKVGYPA---VHVGDIYELDYIGAKRSYVDPIL----LDRYDFYPDVRDRVK 205

Query: 289 DLSSVQTLVSK 299
           +L      + +
Sbjct: 206 NLREALQKIEE 216

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220

 Score = 45.9 bits (109), Expect = 5e-06
 Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 16/105 (15%)

Query: 8   QSNDPHLFQTLNGLRHIAETRRFKAWL-----------LDQFGVLHDGKKPYPGAISTLE 56
           ++     +   +GL H+ + + F   L           L +  +       Y   +  LE
Sbjct: 47  KAMGMINYPDEDGLEHV-DPKDFLYILGIYPSERLVKELKEADIRDGEAFLYDDTLEFLE 105

Query: 57  MLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL 101
            L + G K+ ++SN+S R       L+        F     S E+
Sbjct: 106 GLKSNGYKLALVSNASPR---VKTLLEKFDLKK-YFDALALSYEI 146

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234

 Score = 53.3 bits (128), Expect = 2e-08
 Identities = 12/78 (15%), Positives = 29/78 (37%), Gaps = 5/78 (6%)

Query: 225 GKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGI-----HATEL 279
               +  Y   ++++ +   + + VG+S   DI+   + G   V I   +          
Sbjct: 156 SDKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETF 215

Query: 280 GLDSYGEVADLSSVQTLV 297
             +   +V  L  + +L+
Sbjct: 216 AHERLKQVKRLDDLLSLL 233

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137

 Score = 48.2 bits (115), Expect = 3e-07
 Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSV 268
           + KP++  +++A   + +   D + V DS+  +++GA  AG+  V
Sbjct: 72  VEKPEEAAFQAAADAIDLPMRDCVLVDDSI-LNVRGAVEAGLVGV 115

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137

 Score = 42.8 bits (101), Expect = 2e-05
 Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 30  FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89
            +  ++D  GVL    +      + L      G   V++SN           ++ L  + 
Sbjct: 2   MRGLIVDYAGVLDGTDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGA--APIRELETNG 59

Query: 90  SLFAGAITSGEL 101
            +    + SGEL
Sbjct: 60  -VVDKVLLSGEL 70

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229

 Score = 49.0 bits (117), Expect = 4e-07
 Identities = 33/194 (17%), Positives = 63/194 (32%), Gaps = 33/194 (17%)

Query: 87  FDPSLFAGA---ITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVE 143
            D          I    +  ++   + D  F             ++G I+       + E
Sbjct: 42  LDRERCIENFKKIGFQNIEEKFCTHQLDGIFLQQ----------EKGLITPAEFRDGIRE 91

Query: 144 ----NVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVAN---PDYV 196
                V +     A  +  + +P              +L     K +  +++N     + 
Sbjct: 92  MMGKMVSDKQIDAAWNSFLVDIP---------TYKLDLLLKLREKYVVYLLSNTNDIHWK 142

Query: 197 TVEARALRVMPGTLASKFEK--LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLH 254
            V   A       +   FEK  L  E++ M KP+  I+K+     G+D  ++  + DS  
Sbjct: 143 WVCKNAFPYRTFKVEDYFEKTYLSYEMK-MAKPEPEIFKAVTEDAGIDPKETFFIDDSEI 201

Query: 255 HDIKGANAAGIQSV 268
           +  K A   GI + 
Sbjct: 202 N-CKVAQELGISTY 214

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 3/67 (4%)

Query: 219 GEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE 278
             +  + KP+  +Y+  + +  V   +++ V D L  +++ A A G+ +V  +      E
Sbjct: 135 SALG-VMKPNPAMYRLGLTLAQVRPEEAVMVDDRL-QNVQAARAVGMHAVQCVDAAQLRE 192

Query: 279 LGLDSYG 285
             L + G
Sbjct: 193 E-LAALG 198

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} Length = 240

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)

Query: 226 KPDKIIYK---SAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFI 270
           KP+   +     A+A  G++  D +   +SL+HD   AN AG+ S +I
Sbjct: 152 KPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWI 199

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 12/90 (13%), Positives = 27/90 (30%), Gaps = 9/90 (10%)

Query: 19  NGLRHIAET-----RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSR 73
                  ET       F     +      +    + G    LE ++  G +  ++S+ + 
Sbjct: 50  VSTPFAIETFAPNLENFLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRND 109

Query: 74  RASTTIDKLKSLGFDPSLFAGAITSGELTH 103
           +    ++ L+        F   +TS     
Sbjct: 110 QV---LEILEKTSIAA-YFTEVVTSSSGFK 135

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190

 Score = 38.7 bits (91), Expect = 7e-04
 Identities = 9/53 (16%), Positives = 20/53 (37%), Gaps = 3/53 (5%)

Query: 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE 278
           KP+            + +   + +GD    DI+   AAG+ +      ++  +
Sbjct: 137 KPNPESMLYLREKYQISSG--LVIGDR-PIDIEAGQAAGLDTHLFTSIVNLRQ 186

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 21/190 (11%), Positives = 55/190 (28%), Gaps = 25/190 (13%)

Query: 87  FDPSLFAGAITS-GELTHQYLLRR--DDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVE 143
            +         + G    + +L        F  L          + G  S E    ++  
Sbjct: 19  LNREESIRRFKAIGVADIEEMLDPYLQKGLFLDL----------ESGRKSEEEFRTELSR 68

Query: 144 NVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVAN---PDYVTVEA 200
            + +         + +     ++           ++         +++N          +
Sbjct: 69  YIGKELTY-QQVYDALLGFLEEISAEKFD----YIDSLRPDYRLFLLSNTNPYVLDLAMS 123

Query: 201 RALRVMPGTLASKFEK--LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIK 258
                   TL S F+K     ++    KP++ I+   +A  G+   +++ + D   + + 
Sbjct: 124 PRFLPSGRTLDSFFDKVYASCQMG-KYKPNEDIFLEMIADSGMKPEETLFIDDGPAN-VA 181

Query: 259 GANAAGIQSV 268
            A   G  + 
Sbjct: 182 TAERLGFHTY 191

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 3/43 (6%)

Query: 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSV 268
           K D I    A+    +    +I +GD+   D+ GA   GIQ +
Sbjct: 139 KADVIHQ--ALQTHQLAPEQAIIIGDT-KFDMLGARETGIQKL 178

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 15/79 (18%), Positives = 27/79 (34%), Gaps = 3/79 (3%)

Query: 25  AETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKS 84
            +  R        +  L       PGA+  LE L     K  + ++      T    LK+
Sbjct: 70  EQAERLSEKHAQAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGID--TATINLKA 127

Query: 85  LGFDPSLFAGAITSGELTH 103
           L  D       +T  ++++
Sbjct: 128 LKLDI-NKINIVTRDDVSY 145

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 225 GKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE 278
           GKPD  ++ +A   +G    + + +GD++  D+  A       V ++ G +   
Sbjct: 146 GKPDPDLFLAAAKKIGAPIDECLVIGDAI-WDMLAARRCKATGVGLLSGGYDIG 198

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 17/100 (17%), Positives = 44/100 (44%), Gaps = 7/100 (7%)

Query: 174 LEKILEICASKKIPMVVA-NPDYVTVEARALRVMPGTLASKFEKL--GGEVRWMGKPDKI 230
             ++L+   S+ +  +V      +++  R     P       E +    +V+  GKP+  
Sbjct: 114 AWELLQKVKSEGLTPMVVTGSGQLSLLERLEHNFP--GMFHKELMVTAFDVK-YGKPNPE 170

Query: 231 IYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFI 270
            Y  A+   G+ A +++ + ++    ++  + AGI ++ +
Sbjct: 171 PYLMALKKGGLKADEAVVIENAP-LGVEAGHKAGIFTIAV 209

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282

 Score = 43.6 bits (102), Expect = 4e-05
 Identities = 15/113 (13%), Positives = 35/113 (30%)

Query: 184 KKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDA 243
           K      A  ++     R L +        +         + KP    ++ AM   G+  
Sbjct: 162 KLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLAR 221

Query: 244 CDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTL 296
            ++    D    +I+     G+++   +      E+   +      +S +  L
Sbjct: 222 YENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILEL 274

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226

 Score = 42.9 bits (102), Expect = 5e-05
 Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSV 268
              + + + AM  + + + D+I +GD   +D+ GA    + S+
Sbjct: 142 STKEDVIRYAMESLNIKSDDAIMIGDR-EYDVIGALKNNLPSI 183

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225

 Score = 42.2 bits (100), Expect = 7e-05
 Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 4/93 (4%)

Query: 12  PHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGK-KPYPGAISTLEMLATTGAKMVVISN 70
              F  L G+    +   F+     +  +  +     +P  + TL  L   G ++ +IS 
Sbjct: 54  EESFSILTGITDADQLESFRQEYSKEADIYMNANTILFPDTLPTLTHLKKQGIRIGIIST 113

Query: 71  SSRRASTTIDKLKSLGFDPSLFAGAITSGELTH 103
             R    +   L++   D   F   I   ++TH
Sbjct: 114 KYRFRILSF--LRNHMPDD-WFDIIIGGEDVTH 143

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225

 Score = 40.2 bits (95), Expect = 3e-04
 Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSV 268
           KPD      A+  +     + + +GDS   D   A AAG+   
Sbjct: 145 KPDPEGLLLAIDRLKACPEEVLYIGDS-TVDAGTAAAAGVSFT 186

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 19/96 (19%), Positives = 34/96 (35%), Gaps = 11/96 (11%)

Query: 178 LEICASKKIPMVVANPDYVT--VEARALRVMPGT-LASKFEK-LGGEVRWMGKPDKIIYK 233
           L+      I M +     V+     R    +    L   F+  +G       KP      
Sbjct: 112 LDTLKENNITMAI-----VSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVL 166

Query: 234 SAMAMVGVDACDSIA-VGDSLHHDIKGANAAGIQSV 268
           +A+  + ++    +  +GDS   DI+ A  AG   +
Sbjct: 167 AALTNINIEPSKEVFFIGDS-ISDIQSAIEAGCLPI 201

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 20/92 (21%), Positives = 29/92 (31%), Gaps = 5/92 (5%)

Query: 12  PHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNS 71
           P    TL G R    T  ++  L        D      GAI  L+ L      M ++SN 
Sbjct: 71  PKYLITLLGKRWKEATILYENSLEKS--QKSDNFMLNDGAIELLDTLKENNITMAIVSNK 128

Query: 72  SRRASTTIDKLKSLGFDPSLFAGAITSGELTH 103
           +        ++         F   I SG+   
Sbjct: 129 NGER--LRSEIHHKNLTH-YFDSIIGSGDTGT 157

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207

 Score = 42.2 bits (100), Expect = 7e-05
 Identities = 19/120 (15%), Positives = 47/120 (39%), Gaps = 14/120 (11%)

Query: 178 LEICASKKIPMVVA-N-PDYVTVEARALRVMPGT-LASKFEK-LGGEVRWMGKPDKIIYK 233
           L       I   +  +  +       A  ++    + S F + L  +  ++ KP      
Sbjct: 94  LAWADESGIQQFIYTHKGN------NAFTILKDLGVESYFTEILTSQSGFVRKPSPEAAT 147

Query: 234 SAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSV 293
             +    +++ ++  +GD    D++ A  +GIQS+  +   +     + +   +AD+S +
Sbjct: 148 YLLDKYQLNSDNTYYIGDR-TLDVEFAQNSGIQSINFLESTYEGNHRIQA---LADISRI 203

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207

 Score = 39.1 bits (92), Expect = 7e-04
 Identities = 13/58 (22%), Positives = 20/58 (34%), Gaps = 4/58 (6%)

Query: 46  KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTH 103
              PGA   L     +G +  + ++    A      LK LG +   F   +TS     
Sbjct: 85  VLMPGAREVLAWADESGIQQFIYTHKGNNA---FTILKDLGVES-YFTEILTSQSGFV 138

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243

 Score = 42.3 bits (100), Expect = 8e-05
 Identities = 28/129 (21%), Positives = 53/129 (41%), Gaps = 11/129 (8%)

Query: 174 LEKILEICASKKIPMVVANPDYVTVEARALRVMPGT-LASKFEKL--GGEVRWMGKPDKI 230
           +  +L    +++I + +A     +V   A  ++    L   F       +++   KPD  
Sbjct: 100 IRSLLADLRAQQISVGLA-----SVSLNAPTILAALELREFFTFCADASQLK-NSKPDPE 153

Query: 231 IYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADL 290
           I+ +A A +GV     I + D+    I   NA+G++SV I  G+   +L L S   +   
Sbjct: 154 IFLAACAGLGVPPQACIGIEDAQA-GIDAINASGMRSVGIGAGLTGAQLLLPSTESL-TW 211

Query: 291 SSVQTLVSK 299
             +      
Sbjct: 212 PRLSAFWQN 220

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 15/97 (15%)

Query: 178 LEICASKKIPMVVANPDYVT--VEARALRVMPGTLASKFEKLGG----EVRWMGKPDKII 231
           ++    K + + V     V+         ++       F+   G      R   KP   +
Sbjct: 119 MKNLRQKGVKLAV-----VSNKPNEAVQVLVEELFPGSFDFALGEKSGIRR---KPAPDM 170

Query: 232 YKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSV 268
               + ++GV     + +GDS   DI+ A  + +  +
Sbjct: 171 TSECVKVLGVPRDKCVYIGDS-EIDIQTARNSEMDEI 206

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 17/100 (17%), Positives = 41/100 (41%), Gaps = 7/100 (7%)

Query: 174 LEKILEICASKKIPMVVA-NPDYVTVEARALRVMPGTLASKFEKL--GGEVRWMGKPDKI 230
             ++L    S+ +  +V       ++  R     PG    +   +    +V+  GKP+  
Sbjct: 113 ALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNHNFPGI--FQANLMVTAFDVK-YGKPNPE 169

Query: 231 IYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFI 270
            Y  A+   G    +++ + ++    ++   AAGI ++ +
Sbjct: 170 PYLMALKKGGFKPNEALVIENAP-LGVQAGVAAGIFTIAV 208

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 2/75 (2%)

Query: 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFII-GGIHATELGLDSY 284
           KPD  +Y+ A   +G+D    + V  +   D  GA   G  + +I   G    E+G    
Sbjct: 151 KPDNRVYELAEQALGLDRSAILFVASN-AWDATGARYFGFPTCWINRTGNVFEEMGQTPD 209

Query: 285 GEVADLSSVQTLVSK 299
            EV  L +V  L   
Sbjct: 210 WEVTSLRAVVELFET 224

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 34/188 (18%), Positives = 63/188 (33%), Gaps = 25/188 (13%)

Query: 87  FDPSLFAGAITS-GELTHQYLLRR--DDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVE 143
            D +   GA +    +    L +       F             +RG IS E     +  
Sbjct: 21  IDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQH----------ERGEISDEAFAEALCH 70

Query: 144 NVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVA-NPDYVTVEARA 202
            +          + G       +RP    ++  I+     +   +VV  N + +      
Sbjct: 71  EMALPLSY-EQFSHGWQAVFVALRP----EVIAIMHKLREQGHRVVVLSNTNRLHTTF-W 124

Query: 203 LRVMPGTLASKFEK--LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGA 260
               P  +    +   L  ++  M KP+  IY+  +   G    D++   D+  + I+GA
Sbjct: 125 PEEYPE-IRDAADHIYLSQDLG-MRKPEARIYQHVLQAEGFSPSDTVFFDDNADN-IEGA 181

Query: 261 NAAGIQSV 268
           N  GI S+
Sbjct: 182 NQLGITSI 189

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFII-GGIHATELGLDSY 284
           KPD  IY+ A   +GV+  +   V  +   D+ GA   G  +V I   G           
Sbjct: 161 KPDPRIYQFACDRLGVNPNEVCFVSSN-AWDLGGAGKFGFNTVRINRQGNPPEYEFAPLK 219

Query: 285 GEVADLSSVQTLVSK 299
            +V  LS +  L++K
Sbjct: 220 HQVNSLSELWPLLAK 234

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214

 Score = 40.6 bits (96), Expect = 2e-04
 Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 17/130 (13%)

Query: 171 LQDLEKILEICASKKIPMVVA--NPDYVTVEARALRVMPGT-LASKFEKL--GGEVRWMG 225
             D+ K+L    S+ + + +A  +      +A   R +    L   F+ +  G E +   
Sbjct: 91  FPDVLKVLNEVKSQGLEIGLASSSV-----KADIFRALEENRLQGFFDIVLSGEEFKE-S 144

Query: 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELG----- 280
           KP+  IY +A+  + V A  ++ + DS    I    AA ++   I       +       
Sbjct: 145 KPNPEIYLTALKQLNVQASRALIIEDS-EKGIAAGVAADVEVWAIRDNEFGMDQSAAKGL 203

Query: 281 LDSYGEVADL 290
           LDS  +V DL
Sbjct: 204 LDSLTDVLDL 213

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)

Query: 21  LRHIA-----ETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRA 75
           L H+A     E+    AWLL+    L  G +P PGA+  +  LA  G ++ +++ ++R  
Sbjct: 40  LTHLAALPADESAAKHAWLLEHERDLAQGSRPAPGAVELVRELAGRGYRLGILTRNAREL 99

Query: 76  STTIDKLKSLGFDPSLFAGAITSG 99
                 L+++G     FA A   G
Sbjct: 100 --AHVTLEAIGLAD-CFAEADVLG 120

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 5/60 (8%)

Query: 235 AMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE----LGLDSYGEVADL 290
                 V     + VGD    D+    AAG ++V +    +              ++ DL
Sbjct: 136 LAEAWDVSPSRMVMVGDY-RFDLDCGRAAGTRTVLVNLPDNPWPELTDWHARDCAQLRDL 194

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A Length = 253

 Score = 41.1 bits (96), Expect = 2e-04
 Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 4/90 (4%)

Query: 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFI---IGGIHATELGLD 282
           KP    Y     ++GV   + + V  +   D+ GA   G     +        A EL   
Sbjct: 147 KPHPDSYALVEEVLGVTPAEVLFVSSNGF-DVGGAKNFGFSVARVARLSQEALARELVSG 205

Query: 283 SYGEVADLSSVQTLVSKYDAYPSYVLPSFS 312
           +   +    +++     Y   P +V+P+  
Sbjct: 206 TIAPLTMFKALRMREETYAEAPDFVVPALG 235

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A Length = 201

 Score = 39.8 bits (93), Expect = 4e-04
 Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 4/76 (5%)

Query: 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFII-GGIHATELGLDSY 284
           KP   +YK  +  +G        +  S   D+ GA  AG++S+F+         +G    
Sbjct: 128 KPSPKVYKYFLDSIG---AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPD 184

Query: 285 GEVADLSSVQTLVSKY 300
             V D   +   + +Y
Sbjct: 185 VIVNDFKELYEWILRY 200

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384

 Score = 39.8 bits (92), Expect = 7e-04
 Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 9/90 (10%)

Query: 13  HLFQTL-NGLRHIAETRRFKAWLLDQFGVLHDGK--KPYPGAISTLEMLATTGAKMVVIS 69
            ++Q    G +   +  +  A    + G ++     +P       L  L   G ++ + +
Sbjct: 179 EVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIAT 238

Query: 70  NSSRRASTTIDKLKSLG----FDPSLFAGA 95
                   T+   ++LG    F+    A A
Sbjct: 239 GRPYT--ETVVPFENLGLLPYFEADFIATA 266

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222

 Score = 39.1 bits (92), Expect = 8e-04
 Identities = 13/70 (18%), Positives = 27/70 (38%), Gaps = 6/70 (8%)

Query: 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGG-IHATELG---- 280
           KP        + ++G +   ++ VGD+   DI+    AG ++   + G +          
Sbjct: 139 KPSPTPVLKTLEILGEEPEKALIVGDT-DADIEAGKRAGTKTALALWGYVKLNSQIPDFT 197

Query: 281 LDSYGEVADL 290
           L    ++  L
Sbjct: 198 LSRPSDLVKL 207

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261

 Score = 39.4 bits (91), Expect = 9e-04
 Identities = 10/69 (14%), Positives = 22/69 (31%), Gaps = 3/69 (4%)

Query: 225 GKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFII--GGIHATELGLD 282
            K +   Y+     +G    + + + D    +   A  A +    ++  G    T+    
Sbjct: 186 HKVESESYRKIADSIGCSTNNILFLTDVT-REASAAEEADVHVAVVVRPGNAGLTDDEKT 244

Query: 283 SYGEVADLS 291
            Y  +   S
Sbjct: 245 YYSLITSFS 253

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	313
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	100.0
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	100.0
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	100.0
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	100.0
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	100.0
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	100.0
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	100.0
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	100.0
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.98
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.97
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.95
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.94
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.85
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.84
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.84
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.83
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.83
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.82
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.81
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.81
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.8
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.79
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.79
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.78
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.78
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.78
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.78
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.78
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.78
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.78
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.77
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.77
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.77
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.77
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.76
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.76
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.76
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.76
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.76
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.75
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.75
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.75
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.75
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.75
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.75
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.74
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.73
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.73
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.73
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.73
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	99.73
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.73
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	99.73
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.73
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.72
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.71
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.71
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	99.71
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.71
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.71
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.71
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.71
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	99.7
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.7
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.69
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.68
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.68
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.68
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.67
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.67
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.67
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.67
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.66
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.66
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.66
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.66
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	99.66
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.65
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	99.65
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	99.65
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.64
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.64
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	99.63
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	99.63
3dao_A	283	Putative phosphatse; structural genomics, joint ce	99.62
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	99.62
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	99.61
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.61
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.61
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	99.6
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.6
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	99.59
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	99.58
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.58
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.58
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	99.57
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	99.57
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.57
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.56
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	99.56
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	99.55
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	99.54
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.54
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.51
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.51
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.5
3mn1_A	189	Probable YRBI family phosphatase; structural genom	99.48
3mmz_A	176	Putative HAD family hydrolase; structural genomics	99.47
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	99.46
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	99.46
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.44
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.43
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.43
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	99.43
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	99.42
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	99.41
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.39
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.38
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	99.36
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.35
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	99.34
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	99.32
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.31
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	99.3
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	99.26
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.25
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	99.22
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.22
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.19
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.19
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	99.17
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	99.15
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	99.1
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	98.64
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.02
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	99.0
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	98.96
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	98.9
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	98.76
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	98.69
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	98.53
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	98.48
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	98.37
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	98.05
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	97.99
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	97.94
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	97.71
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	97.31
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	96.76
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	96.42
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	96.26
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	95.84
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	95.4
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	95.21
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	95.11
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	94.58
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	94.5
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	94.13
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	93.89
4gxt_A	385	A conserved functionally unknown protein; structur	93.57
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	93.21
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	92.98
3geb_A	274	EYES absent homolog 2; hydrolase, activator, alter	89.51
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	89.21
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	88.02
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	87.68
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	86.61
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	86.29
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	85.76
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	85.69
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	85.43
2zg6_A	220	Putative uncharacterized protein ST2620, probable	84.53
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	84.2
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	83.77
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	83.11
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	82.89
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	82.81
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	82.31
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	81.97
3fvv_A	232	Uncharacterized protein; unknown function, structu	81.68
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	81.16
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	80.12

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=100.00  E-value=5e-34  Score=253.77  Aligned_cols=247  Identities=20%  Similarity=0.329  Sum_probs=201.2

Q ss_pred             cCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCC-CCCchHHHHHHHhCCCCCcccccccchHHHHHHHH
Q 021350           28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNS-SRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYL  106 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~-~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l  106 (313)
                      |+||+|+||+||||+++.+.+|++.++|++++++|++++++||+ +|+...+...++++|+.... +++++++.+...++
T Consensus         3 m~~kli~~DlDGTLl~~~~~i~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~-~~ii~~~~~~~~~l   81 (264)
T 3epr_A            3 LAYKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPL-ETIYTATMATVDYM   81 (264)
T ss_dssp             CCCCEEEECCBTTTEETTEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCG-GGEEEHHHHHHHHH
T ss_pred             CCCCEEEEeCCCceEeCCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCCh-hheecHHHHHHHHH
Confidence            47999999999999999999999999999999999999999985 57788999999999998877 89999999999888


Q ss_pred             HhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCC
Q 021350          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKI  186 (313)
Q Consensus       107 ~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~  186 (313)
                      .+...      +..++.... ......+.+.|+.+..  ..++.++.          +.+..+.++.+..++..+ +++.
T Consensus        82 ~~~~~------~~~~~~~~~-~~l~~~l~~~g~~~~~--~~~~~v~~----------~~~~~~~~~~~~~~~~~l-~~~~  141 (264)
T 3epr_A           82 NDMNR------GKTAYVIGE-EGLKKAIADAGYVEDT--KNPAYVVV----------GLDWNVTYDKLATATLAI-QNGA  141 (264)
T ss_dssp             HHHTC------CSEEEEESC-HHHHHHHHHTTCEECS--SSCSEEEE----------CCCTTCCHHHHHHHHHHH-HTTC
T ss_pred             HHhCC------CCeEEEECC-HHHHHHHHHcCCcccC--CcCCEEEE----------eCCCCCCHHHHHHHHHHH-HCCC
Confidence            76541      344444332 2334467778887654  55666665          233567889999888776 5788


Q ss_pred             cEEEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCC
Q 021350          187 PMVVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGI  265 (313)
Q Consensus       187 ~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~  265 (313)
                      +++++|.+...+......+..+.+...++. ++.+....+||+|.+|+.+++++|++|++|+||||++.+||.||+++|+
T Consensus       142 ~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~  221 (264)
T 3epr_A          142 LFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDI  221 (264)
T ss_dssp             EEEESCCCSEEEETTEEEECHHHHHHHHHHHHSCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTC
T ss_pred             eEEEEcCCccccCCCceecCccHHHHHHHHHhCCCcccCCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCC
Confidence            889999988766554444555677787876 5788899999999999999999999999999999995599999999999


Q ss_pred             cEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350          266 QSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS  312 (313)
Q Consensus       266 ~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  312 (313)
                      .+++|.+|.+..++                 +......|+|++++|+
T Consensus       222 ~~~~v~~g~~~~~~-----------------~~~~~~~pd~~~~~l~  251 (264)
T 3epr_A          222 DTLLVTTGFTTVEE-----------------VPDLPIQPSYVLASLD  251 (264)
T ss_dssp             EEEEETTSSSCGGG-----------------GGGCSSCCSEEESCGG
T ss_pred             eEEEECCCCCChHH-----------------HHhcCCCCCEEECCHH
Confidence            99999999987766                 3333468999998875

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=100.00  E-value=4.8e-33  Score=249.89  Aligned_cols=261  Identities=25%  Similarity=0.420  Sum_probs=203.5

Q ss_pred             ccchHHhhhhcCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeC-CCCCchHHHHHHHhCCCC-Ccccccc
Q 021350           18 LNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLGFD-PSLFAGA   95 (313)
Q Consensus        18 ~~~~~~~~~~~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn-~~~~~~~~~~~l~~~G~~-~~~~~~i   95 (313)
                      .+++.++++  ++|+|+||+||||+++.++++++.++|+++++.|++++++|| +++....+.+.++.+|++ ... +++
T Consensus         4 ~~~~~~~~~--~~k~i~~D~DGtL~~~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~-~~i   80 (284)
T 2hx1_A            4 IESFKSLLP--KYKCIFFDAFGVLKTYNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITA-DKI   80 (284)
T ss_dssp             BCCHHHHGG--GCSEEEECSBTTTEETTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCG-GGE
T ss_pred             HHHHHHHHh--cCCEEEEcCcCCcCcCCeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCH-hhE
Confidence            456788888  899999999999999999999999999999999999999998 457778899999999998 766 899


Q ss_pred             cchHHHHHHHHHhcCchhhhhcCCeEE-EeecCcccchhhccCCccccC----C---CCCCCEEEecCCCCCCCCCCCCC
Q 021350           96 ITSGELTHQYLLRRDDAWFAALGRSCI-HMTWSDRGAISLEGLGLKVVE----N---VEEADFILAHGTEGMGLPSGDVR  167 (313)
Q Consensus        96 i~~~~~~~~~l~~~~~~~~~~~g~~~~-~~~~~~~~~~~l~~~g~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~  167 (313)
                      +++..+..+++.+.++      + +++ +++. ......+.+.|+....    +   .+..+.+++.          .+.
T Consensus        81 i~~~~~~~~~l~~~~~------~-~v~~~lg~-~~l~~~l~~~G~~~~~~~~~~~~~~~~~~avv~~----------~~~  142 (284)
T 2hx1_A           81 ISSGMITKEYIDLKVD------G-GIVAYLGT-ANSANYLVSDGIKMLPVSAIDDSNIGEVNALVLL----------DDE  142 (284)
T ss_dssp             EEHHHHHHHHHHHHCC------S-EEEEEESC-HHHHHTTCBTTEEEEEGGGCCTTTGGGEEEEEEC----------CSS
T ss_pred             EcHHHHHHHHHHhhcC------C-cEEEEecC-HHHHHHHHHCCCeeccCCCCCcccCCCCCEEEEe----------CCC
Confidence            9999999999987652      3 555 4443 2334578888886541    0   1234555552          234


Q ss_pred             CCC-HHHHHHHHHHHHhCCCcEEEEcCCcccc-ccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHh----C
Q 021350          168 PMS-LQDLEKILEICASKKIPMVVANPDYVTV-EARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMV----G  240 (313)
Q Consensus       168 ~~~-~~~~~~~l~~l~~~g~~~i~tn~d~~~~-~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~l----g  240 (313)
                      .+. .+.+..+++.|+++|++.++||.+...+ ......+..+.+...++. ++.+....+||+|.+|+.+++++    |
T Consensus       143 ~~~~~~~~~~l~~~L~~~g~~~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~  222 (284)
T 2hx1_A          143 GFNWFHDLNKTVNLLRKRTIPAIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKME  222 (284)
T ss_dssp             SSCHHHHHHHHHHHHHHCCCCEEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSC
T ss_pred             CcCccccHHHHHHHHhcCCCeEEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccC
Confidence            442 2456666667778998899999988766 332223455677888887 57788899999999999999999    9


Q ss_pred             CCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350          241 VDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS  312 (313)
Q Consensus       241 v~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  312 (313)
                      ++|++|+||||++.+||.+|+++|+.+++|.+|.+..+++             .++.......|+|++++|.
T Consensus       223 ~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l-------------~~~~~~~~~~pd~~~~~l~  281 (284)
T 2hx1_A          223 ISKREILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDA-------------ETKIKSTGIVPTHICESAV  281 (284)
T ss_dssp             CCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGH-------------HHHHHHHTCCCSEEESCSC
T ss_pred             CCcceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHH-------------HhhhhccCCCCCEEccchh
Confidence            9999999999996699999999999999999998765541             1222244578999999985

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=100.00  E-value=2.5e-32  Score=242.78  Aligned_cols=252  Identities=23%  Similarity=0.423  Sum_probs=199.4

Q ss_pred             cCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeC-CCCCchHHHHHHHhCCCCCcccccccchHHHHHHHH
Q 021350           28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYL  106 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn-~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l  106 (313)
                      |+||+|+||+||||+++.+.+|++.++|++++++|++++++|| ++|+...+.+.++.+|++... +++++++.+...++
T Consensus         6 ~~~kli~~DlDGTLl~~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~-~~ii~~~~~~~~~~   84 (268)
T 3qgm_A            6 PDKKGYIIDIDGVIGKSVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGE-DEILVATYATARFI   84 (268)
T ss_dssp             CCCSEEEEECBTTTEETTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCCG-GGEEEHHHHHHHHH
T ss_pred             ccCCEEEEcCcCcEECCCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCH-HHeeCHHHHHHHHH
Confidence            4799999999999999999999999999999999999999998 457778999999999998877 89999999988888


Q ss_pred             HhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCC
Q 021350          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKI  186 (313)
Q Consensus       107 ~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~  186 (313)
                      .+...      +.+++..+. ......+.+.|+.+.. ..+.+.++.          +.+....++.+...+..++ ++.
T Consensus        85 ~~~~~------~~~~~~~~~-~~l~~~~~~~g~~~~~-~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~-~~~  145 (268)
T 3qgm_A           85 AREKP------NAKVFTTGE-EGLIEELRLAGLEIVD-YDEAEYLVV----------GSNRKINFELMTKALRACL-RGI  145 (268)
T ss_dssp             HHHST------TCEEEECCC-HHHHHHHHHTTCEECC-TTTCSEEEE----------CCCTTCBHHHHHHHHHHHH-HTC
T ss_pred             HhhCC------CCeEEEEcC-HHHHHHHHHcCCeecC-CCCCCEEEE----------ecCCCCCHHHHHHHHHHHh-CCC
Confidence            76541      445554332 2223467777887643 245566655          2345677888888887765 477


Q ss_pred             cEEEEcCCccccccchhccCCchHHHHHHH-hcCce-eecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcC
Q 021350          187 PMVVANPDYVTVEARALRVMPGTLASKFEK-LGGEV-RWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAG  264 (313)
Q Consensus       187 ~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~-~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG  264 (313)
                      +++++|.+...+......+..+.+...++. .+.+. ...+||+|..|+.+++++|+++++|+||||++.+|++||+++|
T Consensus       146 ~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g  225 (268)
T 3qgm_A          146 RYIATNPDRIFPAEDGPIPGTGMIIGALYWMTGREPDVVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIG  225 (268)
T ss_dssp             EEEESCCCCEEEETTEEEECTHHHHHHHHHHHSCCCSEECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHT
T ss_pred             cEEEEeCCCcccCCCCceeChHHHHHHHHHHhCCCcceecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCC
Confidence            889999988776555445666677777765 57778 8999999999999999999999999999999559999999999


Q ss_pred             CcEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350          265 IQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS  312 (313)
Q Consensus       265 ~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  312 (313)
                      +.+++|.+|....+..             ..+..+....|+|++++|.
T Consensus       226 ~~~~~v~~g~~~~~~~-------------~~~~~~~~~~~d~v~~~~~  260 (268)
T 3qgm_A          226 AETVLVLTGVTTRENL-------------DQMIERHGLKPDYVFNSLK  260 (268)
T ss_dssp             CEEEEESSSSCCTTTH-------------HHHHHHHTCCCSEEESSHH
T ss_pred             CcEEEECCCCCCHHHH-------------HhhccccCCCCCEEECCHH
Confidence            9999999998876652             2222244568999998874

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=100.00  E-value=2.4e-33  Score=258.97  Aligned_cols=230  Identities=23%  Similarity=0.275  Sum_probs=186.1

Q ss_pred             CccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCC-CCchHHHHHHH-hCCCCCcccccccchHHHHHHHH
Q 021350           29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLK-SLGFDPSLFAGAITSGELTHQYL  106 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~-~~~~~~~~~l~-~~G~~~~~~~~ii~~~~~~~~~l  106 (313)
                      +.++++||+|||||++.+++|++.++++.|++.|++++++||++ ++.++..++|. .+|++... ++|++++.+++.++
T Consensus        12 ~~~~~l~D~DGvl~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~-~~i~ts~~~~~~~~   90 (352)
T 3kc2_A           12 KKIAFAFDIDGVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSP-LQIIQSHTPYKSLV   90 (352)
T ss_dssp             CCEEEEECCBTTTEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCG-GGEECTTGGGGGGT
T ss_pred             cCCEEEEECCCeeEcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCCh-hhEeehHHHHHHHH
Confidence            67999999999999999999999999999999999999999976 55678899998 69999887 99999998887776


Q ss_pred             HhcCchhhhhcCCeEEEeecCcccchhhccCCccccC-------------------------------CC--CCCCEEEe
Q 021350          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVE-------------------------------NV--EEADFILA  153 (313)
Q Consensus       107 ~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~-------------------------------~~--~~~~~~~~  153 (313)
                      .  .       ++++|+++.. .....+++.|++.+.                               ++  ...+++++
T Consensus        91 ~--~-------~~~v~viG~~-~l~~~l~~~G~~~v~~~~d~~~~~~~~~p~~~l~~ee~~~~~d~ipD~~~~~v~AVvv  160 (352)
T 3kc2_A           91 N--K-------YSRILAVGTP-SVRGVAEGYGFQDVVHQTDIVRYNRDIAPFSGLSDEQVMEYSRDIPDLTTKKFDAVLV  160 (352)
T ss_dssp             T--T-------CSEEEEESST-THHHHHHHHTCSEEEEHHHHHHHCGGGCTTCCCCHHHHHHHCCCCTTTTTSCCCEEEE
T ss_pred             h--c-------CCEEEEECCH-HHHHHHHhCCCeEecchhHhhhhcccccccccCCHHHHhhhccCcccccccCCCEEEE
Confidence            3  2       4677776644 345678888877541                               01  22355555


Q ss_pred             cCCCCCCCCCCCCCCCCHHHHHHHHHHHHh---------------CCCcEEEEcCCccccccchh-ccCCchHHHHHHH-
Q 021350          154 HGTEGMGLPSGDVRPMSLQDLEKILEICAS---------------KKIPMVVANPDYVTVEARAL-RVMPGTLASKFEK-  216 (313)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~---------------~g~~~i~tn~d~~~~~~~~~-~~~~g~~~~~~~~-  216 (313)
                                +.|+...+++++.++.++..               ++.++++||+|..++....+ +++.|.+..+++. 
T Consensus       161 ----------~~Dp~d~~~~lq~~~d~L~s~~G~~~~~~~~~~~~~~~~~i~tN~D~~~~~~~~~~r~g~Ga~~~al~~~  230 (352)
T 3kc2_A          161 ----------FNDPHDWAADIQIISDAINSENGMLNTLRNEKSGKPSIPIYFSNQDLLWANPYKLNRFGQGAFRLLVRRL  230 (352)
T ss_dssp             ----------CSCCSCHHHHHHHHHHHHTSBTTBTTCCCSCCCSSCSSCEEESCCCSEECCSSSSCEECHHHHHHHHHHH
T ss_pred             ----------eCCCcchHHHHHHHHHHHHhcCCCcCcccccccCCCCCeEEEECCCcccccCCCCcccCchHHHHHHHHH
Confidence                      34677778999999988863               57899999999999987654 7788987666654 


Q ss_pred             ---h-cCc--eeecCCCCHHHHHHHHHHh----------------------C-----CCCCcEEEEcCCchhhHHHHHHc
Q 021350          217 ---L-GGE--VRWMGKPDKIIYKSAMAMV----------------------G-----VDACDSIAVGDSLHHDIKGANAA  263 (313)
Q Consensus       217 ---~-~~~--~~~~gKP~~~~~~~~~~~l----------------------g-----v~~~~~v~IGDs~~~Di~~a~~a  263 (313)
                         + |.+  ...+|||++.+|+.+++++                      |     .++++++||||++.+||.+|+++
T Consensus       231 y~~~tg~~~~~~~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~a  310 (352)
T 3kc2_A          231 YLELNGEPLQDYTLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNY  310 (352)
T ss_dssp             HHHHHSSCCCCEECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHH
T ss_pred             HHHhcCCCCCceEecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHc
Confidence               4 443  4789999999999997765                      2     27799999999987899999999


Q ss_pred             CCcEEEEcCCCCCCcc
Q 021350          264 GIQSVFIIGGIHATEL  279 (313)
Q Consensus       264 G~~~i~V~~G~~~~~~  279 (313)
                      |+++++|.+|.+..++
T Consensus       311 G~~ti~V~~G~~~~~~  326 (352)
T 3kc2_A          311 GWNSCLVKTGVYNEGD  326 (352)
T ss_dssp             TCEEEECSSSSCCTTC
T ss_pred             CCEEEEEccCCCCccc
Confidence            9999999999887654

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=100.00  E-value=1.1e-32  Score=245.10  Aligned_cols=245  Identities=23%  Similarity=0.338  Sum_probs=196.2

Q ss_pred             ccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCC-CCchHHHHHHHhCCCCCcccccccchHHHHHHHHHh
Q 021350           30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLR  108 (313)
Q Consensus        30 ~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~-~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l~~  108 (313)
                      +++|+||+||||+++...++++.++++++++.|++++++||.+ +....+.++++++|++... +++++++.+...++.+
T Consensus         1 ik~i~~D~DGtL~~~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~-~~i~~~~~~~~~~l~~   79 (263)
T 1zjj_A            1 MVAIIFDMDGVLYRGNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSS-SIIITSGLATRLYMSK   79 (263)
T ss_dssp             CEEEEEECBTTTEETTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCG-GGEEEHHHHHHHHHHH
T ss_pred             CeEEEEeCcCceEeCCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCCh-hhEEecHHHHHHHHHH
Confidence            4799999999999999889999999999999999999999865 4457888999999998776 8999999999999987


Q ss_pred             cCchhhhhcCCeEEEeecCcccchhhccCCccccC-CC------CCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 021350          109 RDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVE-NV------EEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEIC  181 (313)
Q Consensus       109 ~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  181 (313)
                      ...      +.++++++. ......+.+.|+.... ..      .+++.+++          +.+....++++.++++.+
T Consensus        80 ~~~------~~~v~viG~-~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~v~~----------g~~~~~~~~~~~~~l~~L  142 (263)
T 1zjj_A           80 HLD------PGKIFVIGG-EGLVKEMQALGWGIVTLDEARQGSWKEVKHVVV----------GLDPDLTYEKLKYATLAI  142 (263)
T ss_dssp             HSC------CCCEEEESC-HHHHHHHHHHTSCBCCHHHHHTTGGGGCCEEEE----------CCCTTCBHHHHHHHHHHH
T ss_pred             hCC------CCEEEEEcC-HHHHHHHHHcCCeeccCCcccccccCCCCEEEE----------ecCCCCCHHHHHHHHHHH
Confidence            642      456676543 2334578888886543 10      11566665          345677899999999998


Q ss_pred             HhCCCcEEEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHH
Q 021350          182 ASKKIPMVVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGA  260 (313)
Q Consensus       182 ~~~g~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a  260 (313)
                      + +|.++++||++..++.........+.+...++. ++.+....+||+|.+|+.++++  ++|++|+||||++.+||.+|
T Consensus       143 ~-~g~~~i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~~~~~VGD~~~~Di~~A  219 (263)
T 1zjj_A          143 R-NGATFIGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPGEELWMVGDRLDTDIAFA  219 (263)
T ss_dssp             H-TTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STTCEEEEEESCTTTHHHHH
T ss_pred             H-CCCEEEEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCcccEEEECCChHHHHHHH
Confidence            8 899999999998776433322333677788876 5778889999999999999999  99999999999977999999


Q ss_pred             HHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350          261 NAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS  312 (313)
Q Consensus       261 ~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  312 (313)
                      +++|+.+++|.+|.+..++                 +.+....|+|++++|.
T Consensus       220 ~~aG~~~i~v~~g~~~~~~-----------------~~~~~~~p~~~~~~l~  254 (263)
T 1zjj_A          220 KKFGMKAIMVLTGVSSLED-----------------IKKSEYKPDLVLPSVY  254 (263)
T ss_dssp             HHTTCEEEEESSSSCCHHH-----------------HTTCSSCCSEEESSGG
T ss_pred             HHcCCeEEEECCCCCChHH-----------------HHhcCCCCCEEECCHH
Confidence            9999999999999876544                 2222357999988874

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=100.00  E-value=2.1e-32  Score=243.13  Aligned_cols=248  Identities=23%  Similarity=0.334  Sum_probs=192.2

Q ss_pred             hcCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeC-CCCCchHHHHHHHhCCCCCcccccccchHHHHHHH
Q 021350           27 TRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQY  105 (313)
Q Consensus        27 ~~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn-~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~  105 (313)
                      |++||+|+||+||||+++.+.+|++.++|++++++|++++++|| ++|+...+.+.++++|++... +++++++.+..++
T Consensus         3 m~~~kli~~DlDGTLl~~~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~-~~ii~~~~~~~~~   81 (266)
T 3pdw_A            3 LKTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATE-EQVFTTSMATAQH   81 (266)
T ss_dssp             CCCCSEEEEECSSSTTCHHHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCCG-GGEEEHHHHHHHH
T ss_pred             cccCCEEEEeCcCceEeCCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCH-HHccCHHHHHHHH
Confidence            34699999999999999988899999999999999999999998 667788999999999998877 8899999988888


Q ss_pred             HHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCC
Q 021350          106 LLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKK  185 (313)
Q Consensus       106 l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g  185 (313)
                      +.+...      +.+++..+. ......+.+.|+.+..  ...+.++.          +.+....++.+.+.+..+. .+
T Consensus        82 ~~~~~~------~~~~~~~~~-~~~~~~~~~~g~~~~~--~~~~~~~~----------~~~~~~~~~~~~~~~~~l~-~~  141 (266)
T 3pdw_A           82 IAQQKK------DASVYVIGE-EGIRQAIEENGLTFGG--ENADFVVV----------GIDRSITYEKFAVGCLAIR-NG  141 (266)
T ss_dssp             HHHHCT------TCEEEEESC-HHHHHHHHHTTCEECC--TTCSEEEE----------CCCTTCCHHHHHHHHHHHH-TT
T ss_pred             HHhhCC------CCEEEEEeC-hhHHHHHHHcCCccCC--CCCCEEEE----------eCCCCCCHHHHHHHHHHHH-CC
Confidence            866541      444454332 2233467777876654  45566665          2335677888888887664 57


Q ss_pred             CcEEEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcC
Q 021350          186 IPMVVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAG  264 (313)
Q Consensus       186 ~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG  264 (313)
                      .+++++|.+...+.........+.+...++. .+.+....+||++..|+.+++++|+++++|+||||++.+|++||+++|
T Consensus       142 ~~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG  221 (266)
T 3pdw_A          142 ARFISTNGDIAIPTERGLLPGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAG  221 (266)
T ss_dssp             CEEEESCCCCEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHT
T ss_pred             CeEEEEcCCceeECCCceEecchHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCC
Confidence            7888999888766544434444567777776 578889999999999999999999999999999999449999999999


Q ss_pred             CcEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350          265 IQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS  312 (313)
Q Consensus       265 ~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  312 (313)
                      +.+++|.+|.+..++.                 .+....|+|+.+++.
T Consensus       222 ~~~~~v~~g~~~~~~~-----------------~~~~~~~d~v~~~~~  252 (266)
T 3pdw_A          222 MDTLLVHTGVTKREHM-----------------TDDMEKPTHAIDSLT  252 (266)
T ss_dssp             CEEEEECCC------C-----------------CTTSCCCSEEESSGG
T ss_pred             CeEEEECCCCCChHHH-----------------HhcCCCCCEEeCCHH
Confidence            9999999998877653                 222357999988874

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=100.00  E-value=9e-32  Score=244.38  Aligned_cols=269  Identities=22%  Similarity=0.288  Sum_probs=202.2

Q ss_pred             ccccchHHhhhhcCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCC-CCCchHHHHHHHhCCCC-Ccccc
Q 021350           16 QTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNS-SRRASTTIDKLKSLGFD-PSLFA   93 (313)
Q Consensus        16 ~~~~~~~~~~~~~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~-~~~~~~~~~~l~~~G~~-~~~~~   93 (313)
                      ....+++++++  ++|+|+||+||||+++.++++++.+++++|+++|++++++||+ +++...+.+.++.+|++ ... +
T Consensus         9 ~~~~~~~~~~~--~~k~i~~D~DGTL~~~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~~~~~-~   85 (306)
T 2oyc_A            9 LRGAALRDVLG--RAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRA-E   85 (306)
T ss_dssp             CCHHHHHHHHH--HCSEEEECSBTTTEETTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCCSCCG-G
T ss_pred             CCHHHHHHHHh--hCCEEEECCCCcEecCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCCcCCh-h
Confidence            45667889999  9999999999999999999999999999999999999999985 57778899999999998 555 8


Q ss_pred             cccchHHHHHHHHHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCC-------CCCCEEEecCCCCCCCCCCCC
Q 021350           94 GAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV-------EEADFILAHGTEGMGLPSGDV  166 (313)
Q Consensus        94 ~ii~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~  166 (313)
                      ++++++.+...++.+... .+...|.+++.++. ......+.+.|+......       ...+.+++          +.+
T Consensus        86 ~i~~~~~~~~~~l~~~~~-~~~~~~~~v~~~g~-~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~v~~----------~~~  153 (306)
T 2oyc_A           86 QLFSSALCAARLLRQRLP-GPPDAPGAVFVLGG-EGLRAELRAAGLRLAGDPSAGDGAAPRVRAVLV----------GYD  153 (306)
T ss_dssp             GEEEHHHHHHHHHHHHCC-SCSSSCCEEEEESC-HHHHHHHHHTTCEETTSCCCC---CCCEEEEEE----------CCC
T ss_pred             hEEcHHHHHHHHHHhhCC-ccccCCCeEEEECC-HHHHHHHHHCCCEeecccccccccCCCCCEEEE----------eCC
Confidence            999999999999876320 00000345555432 222346677777654321       22234443          234


Q ss_pred             CCCCHHHHHHHHHHHHhCCCcEEEEcCCccccccc-hhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCC
Q 021350          167 RPMSLQDLEKILEICASKKIPMVVANPDYVTVEAR-ALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDAC  244 (313)
Q Consensus       167 ~~~~~~~~~~~l~~l~~~g~~~i~tn~d~~~~~~~-~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~  244 (313)
                      ....++++.+++..+++++..+++||++...+... ......|.+...++. .+.+....|||+|.+|+.+++++|++|+
T Consensus       154 ~~~~~~~~~~~l~~l~~~g~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~~~  233 (306)
T 2oyc_A          154 EHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPA  233 (306)
T ss_dssp             TTCCHHHHHHHHHHHTSTTSEEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCCGG
T ss_pred             CCCCHHHHHHHHHHHHcCCCEEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCChH
Confidence            66779999999999988888558999887665222 222333446777776 4777788999999999999999999999


Q ss_pred             cEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHH--hhcCCCCcEEecCCc
Q 021350          245 DSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLV--SKYDAYPSYVLPSFS  312 (313)
Q Consensus       245 ~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~l~  312 (313)
                      +|+||||++.+||+||+++|+.+++|.+|.+..++.             .++.  ......|+|++++|.
T Consensus       234 e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~-------------~~~~~~~~~~~~pd~vi~~l~  290 (306)
T 2oyc_A          234 RTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEA-------------QAYLAAGQHDLVPHYYVESIA  290 (306)
T ss_dssp             GEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHH-------------HHHHHTTCGGGSCSEEESSGG
T ss_pred             HEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHH-------------HhhhcccccCCCCCEEECCHH
Confidence            999999996699999999999999999998765431             1100  112357999999875

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=100.00  E-value=3e-31  Score=235.32  Aligned_cols=246  Identities=21%  Similarity=0.316  Sum_probs=194.0

Q ss_pred             CccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCC-CCchHHHHHHHh-CCCCCcccccccchHHHHHHHH
Q 021350           29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKS-LGFDPSLFAGAITSGELTHQYL  106 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~-~~~~~~~~~l~~-~G~~~~~~~~ii~~~~~~~~~l  106 (313)
                      ++++|+||+||||+++...++++.++++.+++.|+++.++||.+ .....+.+.+.. +|++... +++++++.....++
T Consensus         4 ~~k~v~fDlDGTL~~~~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~~~-~~~~~~~~~~~~~~   82 (264)
T 1yv9_A            4 DYQGYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPA-SLVYTATLATIDYM   82 (264)
T ss_dssp             SCCEEEECCBTTTEETTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCG-GGEEEHHHHHHHHH
T ss_pred             cCCEEEEeCCCeEEeCCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCCh-hhEEcHHHHHHHHH
Confidence            58999999999999999889999999999999999999999855 445678888887 9998776 88999998888888


Q ss_pred             HhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCC
Q 021350          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKI  186 (313)
Q Consensus       107 ~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~  186 (313)
                      .+...      +..++..+ .......+.+.|+....  .+++.++..          .+....++++.++++.++ +|+
T Consensus        83 ~~~~~------~~~~~~~g-~~~l~~~l~~~g~~~~~--~~~~~v~~~----------~~~~~~~~~~~~~l~~l~-~g~  142 (264)
T 1yv9_A           83 KEANR------GKKVFVIG-EAGLIDLILEAGFEWDE--TNPDYVVVG----------LDTELSYEKVVLATLAIQ-KGA  142 (264)
T ss_dssp             HHHCC------CSEEEEES-CHHHHHHHHHTTCEECS--SSCSEEEEC----------CCTTCCHHHHHHHHHHHH-TTC
T ss_pred             HhhCC------CCEEEEEe-CHHHHHHHHHcCCcccC--CCCCEEEEE----------CCCCcCHHHHHHHHHHHh-CCC
Confidence            76542      33333332 22334578888887765  456666552          235567899999999986 888


Q ss_pred             cEEEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCC
Q 021350          187 PMVVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGI  265 (313)
Q Consensus       187 ~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~  265 (313)
                      ++++||.+...+......+..+.+...++. ++.+....+||+|.+|+.+++++|++|++|+||||++.+|+.+|+++|+
T Consensus       143 ~~i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~  222 (264)
T 1yv9_A          143 LFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGI  222 (264)
T ss_dssp             EEEESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTC
T ss_pred             EEEEECCCCcccCCCCcccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCC
Confidence            889999888654333323444567777776 4677788999999999999999999999999999995599999999999


Q ss_pred             cEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350          266 QSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS  312 (313)
Q Consensus       266 ~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  312 (313)
                      .+++|.+|.+..+++                 .+....|+|++++|+
T Consensus       223 ~~i~v~~g~~~~~~l-----------------~~~~~~~d~v~~~l~  252 (264)
T 1yv9_A          223 DSLLVTSGFTPKSAV-----------------PTLPTPPTYVVDSLD  252 (264)
T ss_dssp             EEEEETTSSSCSSST-----------------TTCSSCCSEEESSGG
T ss_pred             cEEEECCCCCCHHHH-----------------HhcCCCCCEEEecHH
Confidence            999999998766542                 222357999998875

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.98  E-value=9.4e-31  Score=232.78  Aligned_cols=250  Identities=23%  Similarity=0.350  Sum_probs=191.9

Q ss_pred             HhhhhcCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCC-CCCchHHHHHHHhCCCCCcccccccchHHH
Q 021350           23 HIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNS-SRRASTTIDKLKSLGFDPSLFAGAITSGEL  101 (313)
Q Consensus        23 ~~~~~~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~-~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~  101 (313)
                      .++.  ++++|+||+||||+++.++++++.+++++++++|++++++||+ +|+...+.+.++.+|++... +++++++.+
T Consensus        12 ~~~~--~~~~v~~DlDGTLl~~~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~-~~ii~~~~~   88 (271)
T 1vjr_A           12 HVLD--KIELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPD-DAVVTSGEI   88 (271)
T ss_dssp             CGGG--GCCEEEECCBTTTEETTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCG-GGEEEHHHH
T ss_pred             cccc--CCCEEEEcCcCcEEeCCEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCCCh-hhEEcHHHH
Confidence            3556  8999999999999999999999999999999999999999986 67788999999999998766 789999888


Q ss_pred             HHHHHHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 021350          102 THQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEIC  181 (313)
Q Consensus       102 ~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  181 (313)
                      ...++.+...      +..++..+ .......+.+.|+....  ...+.++..          .+....++++.+.++.+
T Consensus        89 ~~~~~~~~~~------~~~~~~~~-~~~~~~~l~~~g~~~~~--~~~~~~~~~----------~~~~~~~~~~~~~l~~l  149 (271)
T 1vjr_A           89 TAEHMLKRFG------RCRIFLLG-TPQLKKVFEAYGHVIDE--ENPDFVVLG----------FDKTLTYERLKKACILL  149 (271)
T ss_dssp             HHHHHHHHHC------SCEEEEES-CHHHHHHHHHTTCEECS--SSCSEEEEC----------CCTTCCHHHHHHHHHHH
T ss_pred             HHHHHHHhCC------CCeEEEEc-CHHHHHHHHHcCCccCC--CCCCEEEEe----------CCCCcCHHHHHHHHHHH
Confidence            8777765421      34444322 22334467777776543  344555542          23456789999999888


Q ss_pred             HhCCCcEEEEcCCccccccchhccCCchHHHHHHH-hcCce-eecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHH
Q 021350          182 ASKKIPMVVANPDYVTVEARALRVMPGTLASKFEK-LGGEV-RWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKG  259 (313)
Q Consensus       182 ~~~g~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~-~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~  259 (313)
                       +.+.++++||.+...+......+..+.+...++. .+.+. ...+||++.+|+.+++++|++|++|+||||++.+|++|
T Consensus       150 -~~~~~~i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~e~i~iGD~~~nDi~~  228 (271)
T 1vjr_A          150 -RKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKL  228 (271)
T ss_dssp             -TTTCEEEESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHH
T ss_pred             -HCCCeEEEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCceEEEECCCcHHHHHH
Confidence             7888888899877655433223344456666665 46677 88999999999999999999999999999995599999


Q ss_pred             HHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350          260 ANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS  312 (313)
Q Consensus       260 a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  312 (313)
                      |+++|+.+++|.+|.+..++                 +.+....|+|++++|.
T Consensus       229 a~~aG~~~i~v~~g~~~~~~-----------------~~~~~~~~~~~i~~l~  264 (271)
T 1vjr_A          229 GKNAGIVSILVLTGETTPED-----------------LERAETKPDFVFKNLG  264 (271)
T ss_dssp             HHHHTCEEEEESSSSCCHHH-----------------HHHCSSCCSEEESSHH
T ss_pred             HHHcCCeEEEECCCCCCHHH-----------------HhhcCCCCCEEECCHH
Confidence            99999999999999875543                 2222357888888763

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.97  E-value=8.4e-29  Score=218.03  Aligned_cols=225  Identities=20%  Similarity=0.311  Sum_probs=167.2

Q ss_pred             cCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCC-CCchHHHHHHHhCCCCCcccccccchHHHHHHHH
Q 021350           28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAGAITSGELTHQYL  106 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~-~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l  106 (313)
                      +.+|+|+||+||||+++.+.++++.++++.+++.|++++++||.+ ++...+.+.++.+|++... +++++++.....++
T Consensus         5 ~~ik~i~fDlDGTLld~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~~~-~~~~~~~~~~~~~~   83 (259)
T 2ho4_A            5 RALKAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEISE-DEIFTSLTAARNLI   83 (259)
T ss_dssp             -CCCEEEEESSSSSCC---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCCCG-GGEEEHHHHHHHHH
T ss_pred             hhCCEEEEeCcCcEEeCCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCccH-HHeecHHHHHHHHH
Confidence            379999999999999999999999999999999999999999855 6667889999999998776 78888888777777


Q ss_pred             HhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCC
Q 021350          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKI  186 (313)
Q Consensus       107 ~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~  186 (313)
                      .+..        .+++.+.. ......+...+.      ..++.+++...         .....++++.++++.++ +|+
T Consensus        84 ~~~~--------~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~---------~~~~~~~~~~~~l~~l~-~~~  138 (259)
T 2ho4_A           84 EQKQ--------VRPMLLLD-DRALPEFTGVQT------QDPNAVVIGLA---------PEHFHYQLLNQAFRLLL-DGA  138 (259)
T ss_dssp             HHHT--------CCEEEESC-GGGGGGGTTCCC------SSCCEEEECCC---------GGGCBHHHHHHHHHHHH-TTC
T ss_pred             HHcC--------CeEEEEeC-HHHHHHHHHcCC------CCCCEEEEecC---------CCCCCHHHHHHHHHHHH-CCC
Confidence            6543        23333321 121223333322      23445554221         13356899999999888 899


Q ss_pred             cEEEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCC
Q 021350          187 PMVVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGI  265 (313)
Q Consensus       187 ~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~  265 (313)
                      ++++||.+...........+.+.+...+.. .+.+....+||+|.+|+.+++++|++|++|+||||++.+|+.+|+++|+
T Consensus       139 ~~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~  218 (259)
T 2ho4_A          139 PLIAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGM  218 (259)
T ss_dssp             CEEESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTC
T ss_pred             EEEEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCC
Confidence            999999887655444333444444444433 5677788999999999999999999999999999996599999999999


Q ss_pred             cEEEEcCCCCCCc
Q 021350          266 QSVFIIGGIHATE  278 (313)
Q Consensus       266 ~~i~V~~G~~~~~  278 (313)
                      .+++|.+|.+...
T Consensus       219 ~~i~v~~g~~~~~  231 (259)
T 2ho4_A          219 LGILVKTGKYKAA  231 (259)
T ss_dssp             EEEEESSTTCCTT
T ss_pred             cEEEECCCCCCcc
Confidence            9999999965443

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.95  E-value=3.7e-26  Score=198.59  Aligned_cols=243  Identities=22%  Similarity=0.352  Sum_probs=175.0

Q ss_pred             cCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeC-CCCCchHHHHHHHhCCCCCcccccccchHHHHHHHH
Q 021350           28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYL  106 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn-~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l  106 (313)
                      |++|+|+||+||||+++.+.++.+.++++.+++.|+++.++|| .+++...+.+.+..+|++... +.++..+.....++
T Consensus         1 M~~k~i~fDlDGTLl~~~~~~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~   79 (250)
T 2c4n_A            1 MTIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPD-SVFYTSAMATADFL   79 (250)
T ss_dssp             CCCCEEEEECBTTTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCCG-GGEEEHHHHHHHHH
T ss_pred             CCccEEEEcCcceEEeCCEeCcCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCCCCCH-HHeEcHHHHHHHHH
Confidence            4689999999999999999888888899999999999999997 457778888889888887555 56777665555555


Q ss_pred             HhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCC
Q 021350          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKI  186 (313)
Q Consensus       107 ~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~  186 (313)
                      ....        ..........+....+++.|+.+..  ..++.+...          .+..+.+..+...... ...++
T Consensus        80 ~~~~--------~~~~~~~~~~~~l~~l~~~g~~~~~--~~~~~~~~~----------~~~~~~~~~~~~~~~~-~~~~~  138 (250)
T 2c4n_A           80 RRQE--------GKKAYVVGEGALIHELYKAGFTITD--VNPDFVIVG----------ETRSYNWDMMHKAAYF-VANGA  138 (250)
T ss_dssp             HTSS--------CCEEEEECCTHHHHHHHHTTCEECS--SSCSEEEEC----------CCTTCCHHHHHHHHHH-HHTTC
T ss_pred             HhcC--------CCEEEEEcCHHHHHHHHHcCCcccC--CCCCEEEEe----------CCCCCCHHHHHHHHHH-HHCCC
Confidence            4322        2223222333334467777877654  445565552          2245667777666554 45677


Q ss_pred             cEEEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCC
Q 021350          187 PMVVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGI  265 (313)
Q Consensus       187 ~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~  265 (313)
                      .+++||.+ .  .........+.+...++. .+.+....+||++..|+.+++++|++|++|++|||++.+|++||+++|+
T Consensus       139 ~~i~t~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~  215 (250)
T 2c4n_A          139 RFIATNPD-T--HGRGFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGL  215 (250)
T ss_dssp             EEEESCCC-S--BSSTTCBCHHHHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTC
T ss_pred             EEEEECCC-C--CCCCeeecchHHHHHHHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCC
Confidence            77888876 1  111111112335555665 4667788999999999999999999999999999993399999999999


Q ss_pred             cEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350          266 QSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS  312 (313)
Q Consensus       266 ~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  312 (313)
                      .+++|.+|.+..+++                 ......|+|++++++
T Consensus       216 ~~~~v~~g~~~~~~~-----------------~~~~~~~~~v~~~~~  245 (250)
T 2c4n_A          216 ETILVLSGVSSLDDI-----------------DSMPFRPSWIYPSVA  245 (250)
T ss_dssp             EEEEESSSSCCGGGG-----------------SSCSSCCSEEESSGG
T ss_pred             eEEEECCCCCChhhh-----------------hhcCCCCCEEECCHH
Confidence            999999998765542                 112357999998875

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.94  E-value=3.5e-25  Score=195.38  Aligned_cols=225  Identities=20%  Similarity=0.300  Sum_probs=159.5

Q ss_pred             CccEEEEeccceeecC----CccCccHHHHHHHHHHCCCcEEEEeCC-CCCchHHHHHHHhCCCCCcccccccchHHHHH
Q 021350           29 RFKAWLLDQFGVLHDG----KKPYPGAISTLEMLATTGAKMVVISNS-SRRASTTIDKLKSLGFDPSLFAGAITSGELTH  103 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~----~~~~~~a~~~l~~l~~~g~~~~~~Tn~-~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~  103 (313)
                      ++|+|+||+||||+++    .+.++.+.++++++++.|+++.++||. +++...+.+.+.++|++... +.++..+....
T Consensus        11 ~~k~i~fDlDGTLl~s~~~~~~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~~~-~~~~~~~~~~~   89 (271)
T 2x4d_A           11 GVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDISE-QEVTAPAPAAC   89 (271)
T ss_dssp             TCCEEEECCBTTTEECCTTTCEECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCCCG-GGEECHHHHHH
T ss_pred             cCCEEEEeCCCeEEecCCCCCccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCCCH-HHeecHHHHHH
Confidence            7999999999999994    557788999999999999999999984 57778889999999998765 67888777665


Q ss_pred             HHHHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHh
Q 021350          104 QYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICAS  183 (313)
Q Consensus       104 ~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  183 (313)
                      .++....        ...+.. ........+.....      .....+++.+.         +....++.+.+.++.+++
T Consensus        90 ~~~~~~~--------~~~~~~-~~~~~~~~l~~~~~------~~~~~~~~~~~---------~~~~~~~~~~~~l~~l~~  145 (271)
T 2x4d_A           90 QILKERG--------LRPYLL-IHDGVRSEFDQIDT------SNPNCVVIADA---------GESFSYQNMNNAFQVLME  145 (271)
T ss_dssp             HHHHHHT--------CCEEEE-CCGGGGGGGTTSCC------SSCSEEEECCC---------GGGCCHHHHHHHHHHHHH
T ss_pred             HHHHHcC--------CEEEEE-eCHHHHHHHHHcCC------CCCCEEEEecC---------CCCcCHHHHHHHHHHHHh
Confidence            5554432        111211 11111122222211      22344444321         233457888888888887


Q ss_pred             C-CCcEEEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHH
Q 021350          184 K-KIPMVVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGAN  261 (313)
Q Consensus       184 ~-g~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~  261 (313)
                      + ++++++++.+.............+.+...+.. .+.+....+||++..|+.+++++|+++++|++|||+..+|++||+
T Consensus       146 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~  225 (271)
T 2x4d_A          146 LEKPVLISLGKGRYYAATSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQ  225 (271)
T ss_dssp             CSSCCEEEECCCSEEEETTEEEECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHH
T ss_pred             cCCCeEEEEcCCcccccCCCcccChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHH
Confidence            7 88888887665443322222222333333333 466778899999999999999999999999999999449999999


Q ss_pred             HcCCcEEEEcCCCCCCc
Q 021350          262 AAGIQSVFIIGGIHATE  278 (313)
Q Consensus       262 ~aG~~~i~V~~G~~~~~  278 (313)
                      ++|+.+++|.+|.+...
T Consensus       226 ~aG~~~~~v~~g~~~~~  242 (271)
T 2x4d_A          226 RCGMRALQVRTGKFRPS  242 (271)
T ss_dssp             HTTCEEEEESSTTCCGG
T ss_pred             HCCCcEEEEcCCCCCch
Confidence            99999999999965443

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.85  E-value=6.4e-22  Score=173.45  Aligned_cols=120  Identities=23%  Similarity=0.235  Sum_probs=87.1

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.+.+..|+++|+++ ++||.......     +....+...++. .+......+||+|++|+.+++++|++|++|+|
T Consensus        97 ~pg~~~ll~~L~~~g~~i~i~t~~~~~~~~-----l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~  171 (243)
T 4g9b_A           97 LPGIRSLLADLRAQQISVGLASVSLNAPTI-----LAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIG  171 (243)
T ss_dssp             CTTHHHHHHHHHHTTCEEEECCCCTTHHHH-----HHHTTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEEE
T ss_pred             cccHHHHHHhhhcccccceecccccchhhh-----hhhhhhccccccccccccccCCCCcHHHHHHHHHHcCCChHHEEE
Confidence            478899999999999998 66765431110     111112222333 24455678999999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHH
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLV  297 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~  297 (313)
                      |||+. +||++|+++|+.+|+|.+|.+......++ .+...++++.++.
T Consensus       172 VgDs~-~di~aA~~aG~~~I~V~~g~~~ad~~~~~-~~~l~~~~l~~~~  218 (243)
T 4g9b_A          172 IEDAQ-AGIDAINASGMRSVGIGAGLTGAQLLLPS-TESLTWPRLSAFW  218 (243)
T ss_dssp             EESSH-HHHHHHHHHTCEEEEESTTCCSCSEEESS-GGGCCHHHHHHHH
T ss_pred             EcCCH-HHHHHHHHcCCEEEEECCCCCcHHHhcCC-hhhcCHHHHHHHH
Confidence            99996 99999999999999999998876654333 2333455666653

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.84  E-value=8.2e-22  Score=171.70  Aligned_cols=104  Identities=17%  Similarity=0.243  Sum_probs=80.3

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHH--HH-hcCceeecCCCCHHHHHHHHHHhCCCCCcE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKF--EK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDS  246 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~--~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~  246 (313)
                      ++++.++++.++++|+++ ++||.........   +.. .+...+  +. +.......+||+|..|+.+++++|++|++|
T Consensus       111 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~---l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~  186 (243)
T 3qxg_A          111 MPGAWELLQKVKSEGLTPMVVTGSGQLSLLER---LEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEA  186 (243)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECCCCCHHHHTT---HHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGGE
T ss_pred             CCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHH---HHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHHe
Confidence            467889999999999998 7888664322111   111 222333  33 244556789999999999999999999999


Q ss_pred             EEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          247 IAVGDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       247 v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                      ++|||+. +|++||+++|+.+++|.+|....+.
T Consensus       187 i~vGD~~-~Di~~a~~aG~~~i~v~~~~~~~~~  218 (243)
T 3qxg_A          187 VVIENAP-LGVEAGHKAGIFTIAVNTGPLDGQV  218 (243)
T ss_dssp             EEEECSH-HHHHHHHHTTCEEEEECCSSSCHHH
T ss_pred             EEEeCCH-HHHHHHHHCCCEEEEEeCCCCCHHH
Confidence            9999996 9999999999999999998765443

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.84  E-value=4.5e-20  Score=153.77  Aligned_cols=56  Identities=30%  Similarity=0.344  Sum_probs=51.3

Q ss_pred             ecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          223 WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       223 ~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                      ..+||+|.+|+.+++++|++|++|+||||+. +|+++|+++|+.+++|.+|....+.
T Consensus        98 ~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~-~Di~~a~~aG~~~i~v~~g~~~~~~  153 (179)
T 3l8h_A           98 ACRKPLPGMYRDIARRYDVDLAGVPAVGDSL-RDLQAAAQAGCAPWLVQTGNGRKTL  153 (179)
T ss_dssp             SSSTTSSHHHHHHHHHHTCCCTTCEEEESSH-HHHHHHHHHTCEEEEESTTTHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHCCCcEEEECCCCcchhh
Confidence            4459999999999999999999999999997 9999999999999999999775543

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.83  E-value=7.1e-20  Score=154.43  Aligned_cols=132  Identities=23%  Similarity=0.300  Sum_probs=101.3

Q ss_pred             cCccEEEEeccceeec---------------CCccCccHHHHHHHHHHCCCcEEEEeCCCCCc-hHHHHHHHhCCCCCcc
Q 021350           28 RRFKAWLLDQFGVLHD---------------GKKPYPGAISTLEMLATTGAKMVVISNSSRRA-STTIDKLKSLGFDPSL   91 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~---------------~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~-~~~~~~l~~~G~~~~~   91 (313)
                      |++++|+||+||||++               ..+++|++.++|+.|+++|+++.++||+.... ..+...++.+|+....
T Consensus         1 m~ik~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~f   80 (189)
T 3ib6_A            1 MSLTHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYF   80 (189)
T ss_dssp             --CCEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGE
T ss_pred             CCceEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhhe
Confidence            5799999999999954               24678999999999999999999999977543 5666777778875322


Q ss_pred             cccccchHHHHHHHHHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCH
Q 021350           92 FAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSL  171 (313)
Q Consensus        92 ~~~ii~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (313)
                       +.                                                                             
T Consensus        81 -d~-----------------------------------------------------------------------------   82 (189)
T 3ib6_A           81 -DF-----------------------------------------------------------------------------   82 (189)
T ss_dssp             -EE-----------------------------------------------------------------------------
T ss_pred             -EE-----------------------------------------------------------------------------
Confidence             00                                                                             


Q ss_pred             HHHHHHHHHHHhCCCcEEEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcC
Q 021350          172 QDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGD  251 (313)
Q Consensus       172 ~~~~~~l~~l~~~g~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGD  251 (313)
                                       +++..+..                       .....+||+|..|+.+++++|++|++|+||||
T Consensus        83 -----------------i~~~~~~~-----------------------~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VGD  122 (189)
T 3ib6_A           83 -----------------IYASNSEL-----------------------QPGKMEKPDKTIFDFTLNALQIDKTEAVMVGN  122 (189)
T ss_dssp             -----------------EEECCTTS-----------------------STTCCCTTSHHHHHHHHHHHTCCGGGEEEEES
T ss_pred             -----------------EEEccccc-----------------------cccCCCCcCHHHHHHHHHHcCCCcccEEEECC
Confidence                             11111100                       00123499999999999999999999999999


Q ss_pred             CchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350          252 SLHHDIKGANAAGIQSVFIIGGIHAT  277 (313)
Q Consensus       252 s~~~Di~~a~~aG~~~i~V~~G~~~~  277 (313)
                      ++.+|+.+|+++|+.+++|.+|....
T Consensus       123 ~~~~Di~~A~~aG~~~i~v~~~~~~~  148 (189)
T 3ib6_A          123 TFESDIIGANRAGIHAIWLQNPEVCL  148 (189)
T ss_dssp             BTTTTHHHHHHTTCEEEEECCTTTCB
T ss_pred             CcHHHHHHHHHCCCeEEEECCccccc
Confidence            94499999999999999999987643

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.83  E-value=1.9e-21  Score=168.92  Aligned_cols=104  Identities=16%  Similarity=0.211  Sum_probs=78.5

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHH--HH-hcCceeecCCCCHHHHHHHHHHhCCCCCcE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKF--EK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDS  246 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~--~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~  246 (313)
                      ++++.++++.++++|+++ ++||.+.......   +.. .+...+  +. .+......+||+|..|+.+++++|++|++|
T Consensus       110 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~---l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~  185 (247)
T 3dv9_A          110 MPGALEVLTKIKSEGLTPMVVTGSGQTSLLDR---LNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEA  185 (247)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSCC---CHHH---HHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred             CCCHHHHHHHHHHcCCcEEEEcCCchHHHHHH---HHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhhe
Confidence            478889999999999998 7888664322111   111 122223  32 234456789999999999999999999999


Q ss_pred             EEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          247 IAVGDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       247 v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                      ++|||+. +|++||+++|+.+++|.+|....+.
T Consensus       186 i~vGD~~-~Di~~a~~aG~~~i~v~~~~~~~~~  217 (247)
T 3dv9_A          186 LVIENAP-LGVQAGVAAGIFTIAVNTGPLHDNV  217 (247)
T ss_dssp             EEEECSH-HHHHHHHHTTSEEEEECCSSSCHHH
T ss_pred             EEEeCCH-HHHHHHHHCCCeEEEEcCCCCCHHH
Confidence            9999997 9999999999999999998765543

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.82  E-value=6.8e-20  Score=157.34  Aligned_cols=55  Identities=31%  Similarity=0.338  Sum_probs=50.8

Q ss_pred             eecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcE-EEEcCCCCCC
Q 021350          222 RWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQS-VFIIGGIHAT  277 (313)
Q Consensus       222 ~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~-i~V~~G~~~~  277 (313)
                      ...+||+|.+|+.+++++|++|++|+||||+. +|+.+|+++|+.+ ++|.+|....
T Consensus       127 ~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~-~Di~~a~~aG~~~~i~v~~g~~~~  182 (211)
T 2gmw_A          127 CDCRKPHPGMLLSARDYLHIDMAASYMVGDKL-EDMQAAVAANVGTKVLVRTGKPIT  182 (211)
T ss_dssp             CSSSTTSCHHHHHHHHHHTBCGGGCEEEESSH-HHHHHHHHTTCSEEEEESSSSCCC
T ss_pred             CcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCH-HHHHHHHHCCCceEEEEecCCCcc
Confidence            45679999999999999999999999999997 9999999999999 9999987543

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.81  E-value=1.1e-20  Score=167.78  Aligned_cols=104  Identities=8%  Similarity=0.075  Sum_probs=79.6

Q ss_pred             CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcE
Q 021350          169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDS  246 (313)
Q Consensus       169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~  246 (313)
                      ..++++.++|+.|+++|+++ ++||.+..........+..+.+...|+. ++. ... +||+|++|+.+++++|++|++|
T Consensus       130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~~~-~KP~p~~~~~~~~~lg~~p~~~  207 (261)
T 1yns_A          130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-KIG-HKVESESYRKIADSIGCSTNNI  207 (261)
T ss_dssp             CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-GGC-CTTCHHHHHHHHHHHTSCGGGE
T ss_pred             ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-CCC-CCCCHHHHHHHHHHhCcCcccE
Confidence            34689999999999999998 7999876432221111212234444544 234 456 9999999999999999999999


Q ss_pred             EEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          247 IAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       247 v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      +||||+ .+|+.+|+++|+.+|+|.++..
T Consensus       208 l~VgDs-~~di~aA~~aG~~~i~v~~~~~  235 (261)
T 1yns_A          208 LFLTDV-TREASAAEEADVHVAVVVRPGN  235 (261)
T ss_dssp             EEEESC-HHHHHHHHHTTCEEEEECCTTC
T ss_pred             EEEcCC-HHHHHHHHHCCCEEEEEeCCCC
Confidence            999999 5999999999999999987543

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.81  E-value=2.1e-21  Score=166.04  Aligned_cols=100  Identities=21%  Similarity=0.313  Sum_probs=73.8

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHh-cCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.+.++.|++ |+++ ++||............+   .+...++.. +.+  ..+||+|++|+.+++++|++|++|+|
T Consensus        86 ~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~---gl~~~f~~i~~~~--~~~Kp~p~~~~~~~~~lg~~p~~~~~  159 (210)
T 2ah5_A           86 FPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNL---EIHHFFDGIYGSS--PEAPHKADVIHQALQTHQLAPEQAII  159 (210)
T ss_dssp             CTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHT---TCGGGCSEEEEEC--SSCCSHHHHHHHHHHHTTCCGGGEEE
T ss_pred             CCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhc---CchhheeeeecCC--CCCCCChHHHHHHHHHcCCCcccEEE
Confidence            4788899999988 9998 88986542221110001   111122221 122  56799999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHAT  277 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~  277 (313)
                      |||+. +|+++|+++|+++++|.+|....
T Consensus       160 vgDs~-~Di~~a~~aG~~~i~v~~~~~~~  187 (210)
T 2ah5_A          160 IGDTK-FDMLGARETGIQKLAITWGFGEQ  187 (210)
T ss_dssp             EESSH-HHHHHHHHHTCEEEEESSSSSCH
T ss_pred             ECCCH-HHHHHHHHCCCcEEEEcCCCCCH
Confidence            99996 99999999999999999986543

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.80  E-value=7.6e-21  Score=162.62  Aligned_cols=106  Identities=22%  Similarity=0.323  Sum_probs=80.0

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.+++..++++|+++ ++||............+   .+...|+. ........+||+|++|+.+++++|++|++|+|
T Consensus        86 ~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~---~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~  162 (216)
T 3kbb_A           86 NPGVREALEFVKSKRIKLALATSTPQREALERLRRL---DLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVV  162 (216)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT---TCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEEE
T ss_pred             CccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhc---CCCccccccccccccCCCcccHHHHHHHHHhhCCCccceEE
Confidence            468899999999999999 88886653222111011   11222332 23455678899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEE-EcCCCCCCccc
Q 021350          249 VGDSLHHDIKGANAAGIQSVF-IIGGIHATELG  280 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~-V~~G~~~~~~~  280 (313)
                      |||+. +||.+|+++|+++|+ |.+|....+.+
T Consensus       163 VgDs~-~Di~aA~~aG~~~i~~v~~g~~~~~~l  194 (216)
T 3kbb_A          163 FEDSK-SGVEAAKSAGIERIYGVVHSLNDGKAL  194 (216)
T ss_dssp             EECSH-HHHHHHHHTTCCCEEEECCSSSCCHHH
T ss_pred             EecCH-HHHHHHHHcCCcEEEEecCCCCCHHHH
Confidence            99996 999999999999996 78888766653

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.79  E-value=5.7e-20  Score=162.29  Aligned_cols=101  Identities=12%  Similarity=0.032  Sum_probs=74.9

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHH-HHH-hcCceeecCCCCHHHHHHHHHHhCCCC-CcE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASK-FEK-LGGEVRWMGKPDKIIYKSAMAMVGVDA-CDS  246 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~-~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~-~~~  246 (313)
                      ++++.++++.++++|+++ ++||............+   .+... ++. .+......+||+|..|+.+++++|++| ++|
T Consensus       113 ~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~  189 (277)
T 3iru_A          113 IPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAA---KEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGC  189 (277)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH---HHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGGE
T ss_pred             CcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhc---CcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCCccE
Confidence            467889999999999988 78886542211110000   00001 111 123345678999999999999999999 999


Q ss_pred             EEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          247 IAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       247 v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      +||||+. +|++||+++|+.+++|.+|.+
T Consensus       190 i~vGD~~-~Di~~a~~aG~~~v~v~~g~~  217 (277)
T 3iru_A          190 IKVDDTL-PGIEEGLRAGMWTVGVSCSGN  217 (277)
T ss_dssp             EEEESSH-HHHHHHHHTTCEEEEECSSST
T ss_pred             EEEcCCH-HHHHHHHHCCCeEEEEecCCc
Confidence            9999996 999999999999999999975

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.79  E-value=3e-20  Score=162.40  Aligned_cols=105  Identities=19%  Similarity=0.275  Sum_probs=80.6

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCc--eeecCCCCHHHHHHHHHHhCCCC--C
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGE--VRWMGKPDKIIYKSAMAMVGVDA--C  244 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~--~~~~gKP~~~~~~~~~~~lgv~~--~  244 (313)
                      ++++.++++.++++|+++ ++||.........  ......+...++. +..+  ....+||+|..|+.+++++|++|  +
T Consensus       114 ~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~--l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~  191 (250)
T 3l5k_A          114 MPGAEKLIIHLRKHGIPFALATSSRSASFDMK--TSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAME  191 (250)
T ss_dssp             CTTHHHHHHHHHHTTCCEEEECSCCHHHHHHH--TTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCCCGG
T ss_pred             CCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHH--HHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCCCCcc
Confidence            478899999999999998 7888764222111  0011123333443 2445  67789999999999999999998  9


Q ss_pred             cEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          245 DSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       245 ~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      +|++|||+. +|+++|+++|+.+++|.+|....+
T Consensus       192 ~~i~iGD~~-~Di~~a~~aG~~~i~v~~~~~~~~  224 (250)
T 3l5k_A          192 KCLVFEDAP-NGVEAALAAGMQVVMVPDGNLSRD  224 (250)
T ss_dssp             GEEEEESSH-HHHHHHHHTTCEEEECCCTTSCGG
T ss_pred             eEEEEeCCH-HHHHHHHHcCCEEEEEcCCCCchh
Confidence            999999997 999999999999999999876543

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.78  E-value=1.8e-20  Score=162.14  Aligned_cols=105  Identities=15%  Similarity=0.179  Sum_probs=78.1

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++++.++++|+++ ++||............+   .+...++. .+.+....+||+|..|+.+++++|++|++|+|
T Consensus       106 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~  182 (237)
T 4ex6_A          106 YPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELT---GLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVV  182 (237)
T ss_dssp             CTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHH---TGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             CCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc---CchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence            467889999999999988 78886542221110000   11111222 23445667999999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                      |||+. +|++||+++|+.+++|.+|....+.
T Consensus       183 vGD~~-~Di~~a~~aG~~~i~v~~g~~~~~~  212 (237)
T 4ex6_A          183 IGDGV-PDAEMGRAAGMTVIGVSYGVSGPDE  212 (237)
T ss_dssp             EESSH-HHHHHHHHTTCEEEEESSSSSCHHH
T ss_pred             EcCCH-HHHHHHHHCCCeEEEEecCCCCHHH
Confidence            99997 9999999999999999998765443

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.78  E-value=1e-18  Score=148.55  Aligned_cols=51  Identities=12%  Similarity=0.085  Sum_probs=47.5

Q ss_pred             cCCCCHHHHHHHHHHhCCCC-CcEEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          224 MGKPDKIIYKSAMAMVGVDA-CDSIAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       224 ~gKP~~~~~~~~~~~lgv~~-~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      .+||+|+.|..+++++|+++ ++|+||||+. +||++|+++|+.+|+|.+|.+
T Consensus        85 ~~KP~p~~~~~a~~~l~~~~~~~~v~VGDs~-~Di~aA~~aG~~~i~v~~g~~  136 (196)
T 2oda_A           85 AGWPQPDACWMALMALNVSQLEGCVLISGDP-RLLQSGLNAGLWTIGLASCGP  136 (196)
T ss_dssp             SCTTSTHHHHHHHHHTTCSCSTTCEEEESCH-HHHHHHHHHTCEEEEESSSST
T ss_pred             CCCCChHHHHHHHHHcCCCCCccEEEEeCCH-HHHHHHHHCCCEEEEEccCCc
Confidence            34999999999999999975 8999999996 999999999999999999875

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.78  E-value=1.5e-19  Score=155.59  Aligned_cols=104  Identities=16%  Similarity=0.217  Sum_probs=73.8

Q ss_pred             HHHHHHHHHHHHhC-CCcE-EEEcCCccccccchhccCCchHHHHHHH-h-cCceeecCCCCHHHHHHHHHHhC--CCCC
Q 021350          171 LQDLEKILEICASK-KIPM-VVANPDYVTVEARALRVMPGTLASKFEK-L-GGEVRWMGKPDKIIYKSAMAMVG--VDAC  244 (313)
Q Consensus       171 ~~~~~~~l~~l~~~-g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~-~~~~~~~gKP~~~~~~~~~~~lg--v~~~  244 (313)
                      ++++.++++.++++ |+++ ++||............++   +...+.. . +......+||.+..|+.+++++|  ++|+
T Consensus        95 ~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~---l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~~  171 (234)
T 2hcf_A           95 LEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPG---IDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPS  171 (234)
T ss_dssp             CTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTT---CSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGG
T ss_pred             CCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCC---chhhcCcceecCCCcCccchHHHHHHHHHHHhCCCCCcc
Confidence            46888999999988 8888 788865422211110111   1111111 1 11222356788999999999999  9999


Q ss_pred             cEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          245 DSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       245 ~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      +|++|||+. +|+.+|+++|+.+++|.+|....+
T Consensus       172 ~~i~iGD~~-~Di~~a~~aG~~~i~v~~~~~~~~  204 (234)
T 2hcf_A          172 QIVIIGDTE-HDIRCARELDARSIAVATGNFTME  204 (234)
T ss_dssp             GEEEEESSH-HHHHHHHTTTCEEEEECCSSSCHH
T ss_pred             cEEEECCCH-HHHHHHHHCCCcEEEEcCCCCCHH
Confidence            999999997 999999999999999999876543

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.78  E-value=1.3e-19  Score=155.34  Aligned_cols=93  Identities=18%  Similarity=0.270  Sum_probs=73.6

Q ss_pred             HHHHHHHHHHHHhCC-CcE-EEEcCCccccccchhccCCchHHHHHHHhcC-----ceeecCCCCHHHHHHHHHHhCCCC
Q 021350          171 LQDLEKILEICASKK-IPM-VVANPDYVTVEARALRVMPGTLASKFEKLGG-----EVRWMGKPDKIIYKSAMAMVGVDA  243 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g-~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~gKP~~~~~~~~~~~lgv~~  243 (313)
                      ++++.++++.++++| +++ ++||.+...            +...++.++.     .....+||+|..|+.+++++|++|
T Consensus       107 ~~~~~~~l~~l~~~g~~~~~i~t~~~~~~------------~~~~l~~~~~~~~f~~~~~~~kpk~~~~~~~~~~lgi~~  174 (234)
T 3ddh_A          107 LPGVKETLKTLKETGKYKLVVATKGDLLD------------QENKLERSGLSPYFDHIEVMSDKTEKEYLRLLSILQIAP  174 (234)
T ss_dssp             CTTHHHHHHHHHHHCCCEEEEEEESCHHH------------HHHHHHHHTCGGGCSEEEEESCCSHHHHHHHHHHHTCCG
T ss_pred             CccHHHHHHHHHhCCCeEEEEEeCCchHH------------HHHHHHHhCcHhhhheeeecCCCCHHHHHHHHHHhCCCc
Confidence            578889999999988 888 788765421            1122333221     234578999999999999999999


Q ss_pred             CcEEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          244 CDSIAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       244 ~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      ++|++|||++.+|++||+++|+.+++|.+|..
T Consensus       175 ~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~  206 (234)
T 3ddh_A          175 SELLMVGNSFKSDIQPVLSLGGYGVHIPFEVM  206 (234)
T ss_dssp             GGEEEEESCCCCCCHHHHHHTCEEEECCCCTT
T ss_pred             ceEEEECCCcHHHhHHHHHCCCeEEEecCCcc
Confidence            99999999955999999999999999988754

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.78  E-value=1e-18  Score=149.97  Aligned_cols=105  Identities=15%  Similarity=0.209  Sum_probs=77.1

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++++.++++|+++ ++||.+..........+   .+...++. .+......+||+|..|+.+++++|++|++|++
T Consensus        98 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  174 (230)
T 3um9_A           98 FADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNS---GLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEILF  174 (230)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH---TCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred             CCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHC---CChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccEEE
Confidence            478899999999999998 78887642211110000   01111111 12334567899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                      |||+. +|+++|+++|+.+++|.+|....+.
T Consensus       175 iGD~~-~Di~~a~~aG~~~~~~~~~~~~~~~  204 (230)
T 3um9_A          175 VSCNS-WDATGAKYFGYPVCWINRSNGVFDQ  204 (230)
T ss_dssp             EESCH-HHHHHHHHHTCCEEEECTTSCCCCC
T ss_pred             EeCCH-HHHHHHHHCCCEEEEEeCCCCcccc
Confidence            99996 9999999999999999998554443

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.78  E-value=7.6e-20  Score=160.68  Aligned_cols=137  Identities=12%  Similarity=0.125  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-h-cCceee-cCCCCHHHHHHHHHHhCCCCCcE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-L-GGEVRW-MGKPDKIIYKSAMAMVGVDACDS  246 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~-~~~~~~-~gKP~~~~~~~~~~~lgv~~~~~  246 (313)
                      ++++.++++.++++|+++ ++||.+........   ..-.+...++. . ..+... .+||+|..|+.+++++|++|++|
T Consensus       112 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l---~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~  188 (259)
T 4eek_A          112 IEGAAETLRALRAAGVPFAIGSNSERGRLHLKL---RVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERC  188 (259)
T ss_dssp             CTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHH---HHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGGE
T ss_pred             CccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH---HhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHHE
Confidence            467888999999889988 78886653222111   11122333433 2 344556 89999999999999999999999


Q ss_pred             EEEcCCchhhHHHHHHcCCcEEEEcCCCCC----Cccccc--CCCCccchhhHHHHHhhcCCCCcEEecCC
Q 021350          247 IAVGDSLHHDIKGANAAGIQSVFIIGGIHA----TELGLD--SYGEVADLSSVQTLVSKYDAYPSYVLPSF  311 (313)
Q Consensus       247 v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~~~l  311 (313)
                      ++|||+. +|+++|+++|+.+++|.+|...    .+.+..  ..-...+++.+.+++.+....+....++|
T Consensus       189 i~iGD~~-~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l~~~~~~~~~~~~~~  258 (259)
T 4eek_A          189 VVIEDSV-TGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALAEAGLLTPALTPDL  258 (259)
T ss_dssp             EEEESSH-HHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHHHHTTSSCCC-----
T ss_pred             EEEcCCH-HHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHHHhccccccccCCCC
Confidence            9999997 9999999999999999998665    212111  11123455555555655544444444444

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.78  E-value=9.2e-20  Score=157.05  Aligned_cols=105  Identities=19%  Similarity=0.214  Sum_probs=78.5

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++++.++++|+++ ++||.+..........+   .+...++. .+......+||+|..|..+++++|++|++|+|
T Consensus       101 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  177 (233)
T 3umb_A          101 FPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSA---GMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQILF  177 (233)
T ss_dssp             CTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTT---TCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEEE
T ss_pred             CCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHC---CcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEEE
Confidence            478899999999999998 88987652221110001   11111222 23345567899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                      |||+. +|+.+|+++|+.+++|.+|....+.
T Consensus       178 vGD~~-~Di~~a~~~G~~~~~v~~~~~~~~~  207 (233)
T 3umb_A          178 VSSNG-WDACGATWHGFTTFWINRLGHPPEA  207 (233)
T ss_dssp             EESCH-HHHHHHHHHTCEEEEECTTCCCCCS
T ss_pred             EeCCH-HHHHHHHHcCCEEEEEcCCCCCchh
Confidence            99995 9999999999999999998766554

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.77  E-value=2.1e-19  Score=154.01  Aligned_cols=106  Identities=19%  Similarity=0.208  Sum_probs=77.3

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.++++.++++|+++ ++||............+   .+...++. .+.+....+||+|..|+.+++++|++|++|+
T Consensus        87 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i  163 (226)
T 3mc1_A           87 VYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHF---KLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAI  163 (226)
T ss_dssp             BCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHT---TCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEE
T ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh---CCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEE
Confidence            3578889999999999988 78875432111100000   01111111 1223456789999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                      +|||+. +|++||+++|+.+++|.+|....+.
T Consensus       164 ~iGD~~-~Di~~a~~aG~~~i~v~~g~~~~~~  194 (226)
T 3mc1_A          164 MIGDRE-YDVIGALKNNLPSIGVTYGFGSYEE  194 (226)
T ss_dssp             EEESSH-HHHHHHHTTTCCEEEESSSSSCHHH
T ss_pred             EECCCH-HHHHHHHHCCCCEEEEccCCCCHHH
Confidence            999996 9999999999999999998876554

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.77  E-value=4e-20  Score=159.00  Aligned_cols=105  Identities=16%  Similarity=0.199  Sum_probs=77.9

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.+.++.+++.|+++ ++||.+..........++   +...++. .+......+||++..|+.+++++|++|++|++
T Consensus        93 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~---l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~  169 (233)
T 3s6j_A           93 LPGAVELLETLDKENLKWCIATSGGIDTATINLKALK---LDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLV  169 (233)
T ss_dssp             CTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTT---CCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEEE
T ss_pred             CCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcc---hhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHEEE
Confidence            467889999999999998 788865422211110111   1111222 23344567999999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                      |||+. +|+.+|+++|+.+++|.+|....+.
T Consensus       170 iGD~~-~Di~~a~~aG~~~i~v~~g~~~~~~  199 (233)
T 3s6j_A          170 IGDAI-WDMLAARRCKATGVGLLSGGYDIGE  199 (233)
T ss_dssp             EESSH-HHHHHHHHTTCEEEEEGGGSCCHHH
T ss_pred             EeCCH-HhHHHHHHCCCEEEEEeCCCCchHh
Confidence            99997 9999999999999999998765554

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.77  E-value=9.6e-20  Score=157.08  Aligned_cols=102  Identities=21%  Similarity=0.264  Sum_probs=74.5

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhC-CCCCcE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVG-VDACDS  246 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lg-v~~~~~  246 (313)
                      .++++.+.++.++++ +++ ++||.+..........+   .+...++. ........+||+|..|+.+++++| ++|++|
T Consensus       104 ~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~  179 (238)
T 3ed5_A          104 LIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDS---GLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHT  179 (238)
T ss_dssp             BCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHT---TCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGE
T ss_pred             CCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHc---ChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCChhHe
Confidence            357888999999888 877 78886642221110001   11111221 123345679999999999999999 999999


Q ss_pred             EEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          247 IAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       247 v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      ++|||+..+|+++|+++|+.+++|.+|..
T Consensus       180 i~vGD~~~~Di~~a~~aG~~~i~~~~~~~  208 (238)
T 3ed5_A          180 LIIGDSLTADIKGGQLAGLDTCWMNPDMK  208 (238)
T ss_dssp             EEEESCTTTTHHHHHHTTCEEEEECTTCC
T ss_pred             EEECCCcHHHHHHHHHCCCEEEEECCCCC
Confidence            99999955999999999999999999854

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.77  E-value=4e-20  Score=158.99  Aligned_cols=99  Identities=29%  Similarity=0.383  Sum_probs=75.4

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.+.++.++++ .++ ++||.+......        .+...++. .+......+||+|..|+.+++++|++|++|+|
T Consensus       107 ~~~~~~~l~~l~~~-~~~~i~t~~~~~l~~~--------~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  177 (230)
T 3vay_A          107 FPEVQPTLEILAKT-FTLGVITNGNADVRRL--------GLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVDASAAVH  177 (230)
T ss_dssp             CTTHHHHHHHHHTT-SEEEEEESSCCCGGGS--------TTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CcCHHHHHHHHHhC-CeEEEEECCchhhhhc--------CcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCCchheEE
Confidence            46788899888877 776 889876542111        11112222 12334557899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      |||++.+|+++|+++|+.+++|.+|....+
T Consensus       178 vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~  207 (230)
T 3vay_A          178 VGDHPSDDIAGAQQAGMRAIWYNPQGKAWD  207 (230)
T ss_dssp             EESCTTTTHHHHHHTTCEEEEECTTCCCCC
T ss_pred             EeCChHHHHHHHHHCCCEEEEEcCCCCCCc
Confidence            999955999999999999999999877543

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.76  E-value=7.5e-19  Score=151.40  Aligned_cols=72  Identities=24%  Similarity=0.262  Sum_probs=57.7

Q ss_pred             eecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcE-EEEcCCCCCCcccccCCCCccchhhHHHH
Q 021350          222 RWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQS-VFIIGGIHATELGLDSYGEVADLSSVQTL  296 (313)
Q Consensus       222 ~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~-i~V~~G~~~~~~~~~~~~~~~~~~~~~~~  296 (313)
                      ...+||+|.+|+.+++++|++|++|+||||++ +|+++|+++|+.+ ++|.+|....+..  ...+...++++.++
T Consensus       133 ~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~-~Di~~a~~aG~~~~i~v~~g~~~~~~~--~~~~~~~i~~l~el  205 (218)
T 2o2x_A          133 HPMRKPNPGMLVEAGKRLALDLQRSLIVGDKL-ADMQAGKRAGLAQGWLVDGEAAVQPGF--AIRPLRDSSELGDL  205 (218)
T ss_dssp             CTTSTTSCHHHHHHHHHHTCCGGGCEEEESSH-HHHHHHHHTTCSEEEEETCCCEEETTE--EEEEESSHHHHHHH
T ss_pred             CccCCCCHHHHHHHHHHcCCCHHHEEEEeCCH-HHHHHHHHCCCCEeEEEecCCCCcccc--cCCCCEecccHHHH
Confidence            34679999999999999999999999999997 9999999999999 9999998755431  12233344444444

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.76  E-value=2.4e-19  Score=157.57  Aligned_cols=96  Identities=19%  Similarity=0.174  Sum_probs=71.3

Q ss_pred             HHHHHHHHHHHHhCCCcEEEE-cCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPMVVA-NPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~i~t-n~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.+++..++++|+++.++ +......     .+..-.+...++. ++.+....+||+|++|..+++++|++|++|+|
T Consensus       118 ~p~~~~ll~~Lk~~g~~i~i~~~~~~~~~-----~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~  192 (250)
T 4gib_A          118 LPGIESLLIDVKSNNIKIGLSSASKNAIN-----VLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIG  192 (250)
T ss_dssp             CTTHHHHHHHHHHTTCEEEECCSCTTHHH-----HHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             chhHHHHHHHHHhcccccccccccchhhh-----HhhhcccccccceeecccccCCCCCcHHHHHHHHHHhCCChHHeEE
Confidence            478899999999999998543 3322110     0111112222333 24455678899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcC
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIG  272 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~  272 (313)
                      |||+. +|+++|+++|+.+|+|.+
T Consensus       193 VGDs~-~Di~aA~~aG~~~i~v~~  215 (250)
T 4gib_A          193 IEDAS-AGIDAINSANMFSVGVGN  215 (250)
T ss_dssp             EESSH-HHHHHHHHTTCEEEEESC
T ss_pred             ECCCH-HHHHHHHHcCCEEEEECC
Confidence            99996 999999999999999954

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.76  E-value=1.2e-18  Score=151.81  Aligned_cols=102  Identities=19%  Similarity=0.281  Sum_probs=75.6

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.+.+..|+++|+++ ++||............++   +. .++. .+......+||+|.+|..+++++|++|++|+|
T Consensus       112 ~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~---l~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~  187 (240)
T 2hi0_A          112 FPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELF---PG-SFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVY  187 (240)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHS---TT-TCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             CCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcC---Cc-ceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence            467899999999999999 888854421111000000   11 1222 12334567999999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHAT  277 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~  277 (313)
                      |||+. +|+++|+++|+.+|+|.+|....
T Consensus       188 vGDs~-~Di~~a~~aG~~~v~v~~~~~~~  215 (240)
T 2hi0_A          188 IGDSE-IDIQTARNSEMDEIAVNWGFRSV  215 (240)
T ss_dssp             EESSH-HHHHHHHHTTCEEEEESSSSSCH
T ss_pred             EcCCH-HHHHHHHHCCCeEEEECCCCCch
Confidence            99996 99999999999999999987543

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.76  E-value=3.9e-19  Score=153.18  Aligned_cols=101  Identities=19%  Similarity=0.235  Sum_probs=72.4

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCC-cEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDAC-DSI  247 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~-~~v  247 (313)
                      ++++.++++.++++|+++ ++||.+..........+   .+...++. +.......+||+|..|+.+++++|++|+ +|+
T Consensus       105 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v  181 (231)
T 3kzx_A          105 NDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHK---NLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVF  181 (231)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT---TCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEE
T ss_pred             CcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHC---CchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcccCEE
Confidence            478899999999999998 78885432111110000   01111121 1233456789999999999999999999 999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      +|||+. +|+++|+++|+.+|++.++..
T Consensus       182 ~vGD~~-~Di~~a~~aG~~~v~~~~~~~  208 (231)
T 3kzx_A          182 FIGDSI-SDIQSAIEAGCLPIKYGSTNI  208 (231)
T ss_dssp             EEESSH-HHHHHHHHTTCEEEEECC---
T ss_pred             EEcCCH-HHHHHHHHCCCeEEEECCCCC
Confidence            999997 999999999999999977544

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.76  E-value=7.8e-20  Score=157.66  Aligned_cols=101  Identities=21%  Similarity=0.267  Sum_probs=74.2

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++++.++ +|+++ ++||.+..........+   .+...++. ........+||++..|+.+++++|++|++|++
T Consensus       109 ~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~  184 (240)
T 3qnm_A          109 MPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSA---GVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESLM  184 (240)
T ss_dssp             STTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHH---TCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEE
T ss_pred             CccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHc---ChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence            467888998888 88888 78886542221110000   01111111 12334557899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      |||++.+|+++|+++|+.++++.+|..
T Consensus       185 iGD~~~~Di~~a~~aG~~~~~~~~~~~  211 (240)
T 3qnm_A          185 IGDSWEADITGAHGVGMHQAFYNVTER  211 (240)
T ss_dssp             EESCTTTTHHHHHHTTCEEEEECCSCC
T ss_pred             ECCCchHhHHHHHHcCCeEEEEcCCCC
Confidence            999955999999999999999999876

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.75  E-value=3.8e-19  Score=153.37  Aligned_cols=104  Identities=19%  Similarity=0.279  Sum_probs=76.6

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++++.++++|+++ ++||............+   .+...++. .+......+||+|..|+.+++++|++|++|+|
T Consensus        97 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  173 (232)
T 1zrn_A           97 FSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHA---GLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILF  173 (232)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEE
T ss_pred             CccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhc---ChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence            467888999999999988 78886543221110000   11111222 23344567899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      |||+. +|+.+|+++|+.+++|.+|....+
T Consensus       174 iGD~~-~Di~~a~~aG~~~~~~~~~~~~~~  202 (232)
T 1zrn_A          174 VASNA-WDATGARYFGFPTCWINRTGNVFE  202 (232)
T ss_dssp             EESCH-HHHHHHHHHTCCEEEECTTCCCCC
T ss_pred             EeCCH-HHHHHHHHcCCEEEEEcCCCCCcc
Confidence            99996 999999999999999999765433

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.75  E-value=3.4e-18  Score=149.50  Aligned_cols=93  Identities=15%  Similarity=0.258  Sum_probs=71.6

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhc-----CceeecCCCCHHHHHHHHHHhCCCC
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLG-----GEVRWMGKPDKIIYKSAMAMVGVDA  243 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~gKP~~~~~~~~~~~lgv~~  243 (313)
                      .++++.++++.++ +|+++ ++||......            ...++..+     ......+||+|..|..+++++|++|
T Consensus       113 ~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~------------~~~l~~~~l~~~f~~i~~~~kp~~~~~~~~~~~l~~~~  179 (251)
T 2pke_A          113 VIAGVREAVAAIA-ADYAVVLITKGDLFHQ------------EQKIEQSGLSDLFPRIEVVSEKDPQTYARVLSEFDLPA  179 (251)
T ss_dssp             BCTTHHHHHHHHH-TTSEEEEEEESCHHHH------------HHHHHHHSGGGTCCCEEEESCCSHHHHHHHHHHHTCCG
T ss_pred             cCccHHHHHHHHH-CCCEEEEEeCCCHHHH------------HHHHHHcCcHHhCceeeeeCCCCHHHHHHHHHHhCcCc
Confidence            3578899999988 88888 7888654211            11222222     1233468999999999999999999


Q ss_pred             CcEEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          244 CDSIAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       244 ~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      ++|++|||+..+|+.+|+++|+.+++|.+|..
T Consensus       180 ~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~  211 (251)
T 2pke_A          180 ERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVT  211 (251)
T ss_dssp             GGEEEEESCCCCCCHHHHHTTCEEEECCCC--
T ss_pred             hhEEEECCCchhhHHHHHHCCCEEEEECCCCc
Confidence            99999999954999999999999999988864

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.75  E-value=1.1e-18  Score=138.21  Aligned_cols=50  Identities=24%  Similarity=0.415  Sum_probs=47.0

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          225 GKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       225 gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      +||+|..|+.+++++|++|++|+||||+. +|+.+|+++|+.++++.+|..
T Consensus        73 ~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~di~~a~~~G~~~i~~~~~~~  122 (137)
T 2pr7_A           73 EKPEEAAFQAAADAIDLPMRDCVLVDDSI-LNVRGAVEAGLVGVYYQQFDR  122 (137)
T ss_dssp             CTTSHHHHHHHHHHTTCCGGGEEEEESCH-HHHHHHHHHTCEEEECSCHHH
T ss_pred             CCCCHHHHHHHHHHcCCCcccEEEEcCCH-HHHHHHHHCCCEEEEeCChHH
Confidence            39999999999999999999999999997 999999999999999988654

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.75  E-value=1.1e-19  Score=153.68  Aligned_cols=103  Identities=21%  Similarity=0.242  Sum_probs=76.2

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++++.++++|+++ ++||.+..........+   .+...++. ........+||+|..|+.+++++|++|++|++
T Consensus        91 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  167 (214)
T 3e58_A           91 FPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEEN---RLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALI  167 (214)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             CchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHc---CcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeEE
Confidence            467889999999999988 78887542221110001   11111221 23344567899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHAT  277 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~  277 (313)
                      |||+. +|+.+|+++|+.++++.+|....
T Consensus       168 iGD~~-~Di~~a~~aG~~~~~~~~~~~~~  195 (214)
T 3e58_A          168 IEDSE-KGIAAGVAADVEVWAIRDNEFGM  195 (214)
T ss_dssp             EECSH-HHHHHHHHTTCEEEEECCSSSCC
T ss_pred             EeccH-hhHHHHHHCCCEEEEECCCCccc
Confidence            99995 99999999999999999875443

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.75  E-value=1.3e-19  Score=153.70  Aligned_cols=100  Identities=16%  Similarity=0.137  Sum_probs=75.2

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHH--HHh-cCceeecCCCCHHHHHHHHHHhCCCCCcE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKF--EKL-GGEVRWMGKPDKIIYKSAMAMVGVDACDS  246 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~--~~~-~~~~~~~gKP~~~~~~~~~~~lgv~~~~~  246 (313)
                      ++++.++++.++++|+++ ++||............+   .+...+  ... +.+. ..+||+|..|+.+++++|++|++|
T Consensus        72 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---~l~~~f~~~~i~~~~~-~~~kp~~~~~~~~~~~~g~~~~~~  147 (205)
T 3m9l_A           72 APGAVELVRELAGRGYRLGILTRNARELAHVTLEAI---GLADCFAEADVLGRDE-APPKPHPGGLLKLAEAWDVSPSRM  147 (205)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT---TCGGGSCGGGEECTTT-SCCTTSSHHHHHHHHHTTCCGGGE
T ss_pred             CccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHc---CchhhcCcceEEeCCC-CCCCCCHHHHHHHHHHcCCCHHHE
Confidence            467889999999999998 78886542221111011   111222  222 2223 689999999999999999999999


Q ss_pred             EEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          247 IAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       247 v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      ++|||+. +|+++|+++|+.+|+|.+|..
T Consensus       148 i~iGD~~-~Di~~a~~aG~~~i~v~~~~~  175 (205)
T 3m9l_A          148 VMVGDYR-FDLDCGRAAGTRTVLVNLPDN  175 (205)
T ss_dssp             EEEESSH-HHHHHHHHHTCEEEECSSSSC
T ss_pred             EEECCCH-HHHHHHHHcCCEEEEEeCCCC
Confidence            9999997 999999999999999999864

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.74  E-value=1.9e-17  Score=143.63  Aligned_cols=51  Identities=29%  Similarity=0.354  Sum_probs=48.4

Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       224 ~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      .+||+|..|+.+++++|++|++|++|||+. +|+++|+++|+.+++|.+|..
T Consensus       159 ~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~-~Di~~a~~aG~~~~~v~~~~~  209 (240)
T 2no4_A          159 IYKPDPRIYQFACDRLGVNPNEVCFVSSNA-WDLGGAGKFGFNTVRINRQGN  209 (240)
T ss_dssp             CCTTSHHHHHHHHHHHTCCGGGEEEEESCH-HHHHHHHHHTCEEEEECTTCC
T ss_pred             CCCCCHHHHHHHHHHcCCCcccEEEEeCCH-HHHHHHHHCCCEEEEECCCCC
Confidence            469999999999999999999999999996 999999999999999999865

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.73  E-value=3.8e-18  Score=146.92  Aligned_cols=103  Identities=21%  Similarity=0.261  Sum_probs=76.7

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++++.++++|+++ ++||............++   +...++. .+......+||+|..|..+++++|++|++|++
T Consensus        85 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~g---l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  161 (222)
T 2nyv_A           85 YPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILN---LSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALI  161 (222)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTT---CGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGGEEE
T ss_pred             CCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC---CHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCchhEEE
Confidence            478899999999999998 888865432211100011   1111222 23344567899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHAT  277 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~  277 (313)
                      |||+. +|+.+|+++|+.+++|.+|....
T Consensus       162 vGD~~-~Di~~a~~aG~~~i~v~~g~~~~  189 (222)
T 2nyv_A          162 VGDTD-ADIEAGKRAGTKTALALWGYVKL  189 (222)
T ss_dssp             EESSH-HHHHHHHHHTCEEEEETTSSCSC
T ss_pred             ECCCH-HHHHHHHHCCCeEEEEcCCCCCc
Confidence            99995 99999999999999999987544

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.73  E-value=4.5e-19  Score=152.69  Aligned_cols=98  Identities=20%  Similarity=0.274  Sum_probs=72.0

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHH---HHHhCCCCC
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSA---MAMVGVDAC  244 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~---~~~lgv~~~  244 (313)
                      .++++.++++.+++ ++++ ++||.+..........+.     ..++. .+......+||+|.+|..+   ++++|++|+
T Consensus       100 ~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~-----~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~  173 (240)
T 3smv_A          100 AFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLG-----VEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKK  173 (240)
T ss_dssp             BCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTC-----SCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGG
T ss_pred             CCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcC-----CccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCch
Confidence            35788899999888 7777 889876532211110010     11111 1223455789999999999   889999999


Q ss_pred             cEEEEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350          245 DSIAVGDSLHHDIKGANAAGIQSVFIIGG  273 (313)
Q Consensus       245 ~~v~IGDs~~~Di~~a~~aG~~~i~V~~G  273 (313)
                      +|++|||++.+|+++|+++|+.+++|.++
T Consensus       174 ~~~~vGD~~~~Di~~a~~aG~~~~~~~~~  202 (240)
T 3smv_A          174 DILHTAESLYHDHIPANDAGLVSAWIYRR  202 (240)
T ss_dssp             GEEEEESCTTTTHHHHHHHTCEEEEECTT
T ss_pred             hEEEECCCchhhhHHHHHcCCeEEEEcCC
Confidence            99999999559999999999999999975

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.73  E-value=1.1e-17  Score=147.71  Aligned_cols=103  Identities=24%  Similarity=0.373  Sum_probs=76.4

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++++.++++|+++ ++||.....  ...  +..-.+...++. ++......+||+|..|..+++++|++|++|+|
T Consensus       108 ~~~~~~~l~~l~~~g~~~~i~tn~~~~~--~~~--l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~~  183 (263)
T 3k1z_A          108 LDGAEDTLRECRTRGLRLAVISNFDRRL--EGI--LGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAH  183 (263)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEESCCTTH--HHH--HHHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CcCHHHHHHHHHhCCCcEEEEeCCcHHH--HHH--HHhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEEE
Confidence            478899999999999998 889865421  110  000001111111 12233457899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHAT  277 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~  277 (313)
                      |||++.+|+.+|+++|+.+++|.+|....
T Consensus       184 vGD~~~~Di~~a~~aG~~~i~~~~~~~~~  212 (263)
T 3k1z_A          184 VGDNYLCDYQGPRAVGMHSFLVVGPQALD  212 (263)
T ss_dssp             EESCHHHHTHHHHTTTCEEEEECCSSCCC
T ss_pred             ECCCcHHHHHHHHHCCCEEEEEcCCCCCc
Confidence            99995599999999999999999986544

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.73  E-value=2.4e-18  Score=148.51  Aligned_cols=107  Identities=20%  Similarity=0.152  Sum_probs=81.9

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhcc---CCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCc
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRV---MPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACD  245 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~---~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~  245 (313)
                      ++++.++++.++++ +++ ++||.+......-...+   ....+...++. +.......+||+|.+|+.+++++|++|++
T Consensus       114 ~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~~~~  192 (229)
T 4dcc_A          114 PTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDPKE  192 (229)
T ss_dssp             CHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred             cHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCCHHH
Confidence            47899999999887 887 88997764332110112   22344444443 24455678899999999999999999999


Q ss_pred             EEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          246 SIAVGDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       246 ~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                      |++|||+. +|+++|+++|+.+++|.+|....+.
T Consensus       193 ~~~vGD~~-~Di~~a~~aG~~~i~v~~~~~~k~~  225 (229)
T 4dcc_A          193 TFFIDDSE-INCKVAQELGISTYTPKAGEDWSHL  225 (229)
T ss_dssp             EEEECSCH-HHHHHHHHTTCEEECCCTTCCGGGG
T ss_pred             eEEECCCH-HHHHHHHHcCCEEEEECCHHHHHHH
Confidence            99999997 9999999999999999998665544

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.73  E-value=8.1e-17  Score=144.06  Aligned_cols=179  Identities=14%  Similarity=0.129  Sum_probs=113.6

Q ss_pred             hcCccEEEEeccceeecCCccC-ccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHHHHHH
Q 021350           27 TRRFKAWLLDQFGVLHDGKKPY-PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQY  105 (313)
Q Consensus        27 ~~~~k~iifDlDGTL~~~~~~~-~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~  105 (313)
                      ||++|+|+||+||||+++...+ +.+.++|++++++|+.++++|  ||+...+...++.+|++.    .+++.+      
T Consensus         3 ~M~~kli~fDlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaT--GR~~~~~~~~~~~~~~~~----~~i~~n------   70 (290)
T 3dnp_A            3 AMSKQLLALNIDGALLRSNGKIHQATKDAIEYVKKKGIYVTLVT--NRHFRSAQKIAKSLKLDA----KLITHS------   70 (290)
T ss_dssp             ---CCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEBC--SSCHHHHHHHHHHTTCCS----CEEEGG------
T ss_pred             CCcceEEEEcCCCCCCCCCCccCHHHHHHHHHHHHCCCEEEEEC--CCChHHHHHHHHHcCCCC----eEEEcC------
Confidence            4679999999999999987655 678899999999999999999  888888888888888862    223322      


Q ss_pred             HHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCC
Q 021350          106 LLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKK  185 (313)
Q Consensus       106 l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g  185 (313)
                                  |..++.            ..+-          .+.             ...++.+.+.+++..+++.+
T Consensus        71 ------------Ga~i~~------------~~~~----------~~~-------------~~~l~~~~~~~i~~~~~~~~  103 (290)
T 3dnp_A           71 ------------GAYIAE------------KIDA----------PFF-------------EKRISDDHTFNIVQVLESYQ  103 (290)
T ss_dssp             ------------GTEEES------------STTS----------CSE-------------ECCCCHHHHHHHHHHHHTSS
T ss_pred             ------------CeEEEc------------CCCC----------EEE-------------ecCCCHHHHHHHHHHHHHcC
Confidence                        222210            0000          000             02345677777777777777


Q ss_pred             CcE-EEEcCCccccccchh----------------------------------------cc-CCchHHHHHHH---hcC-
Q 021350          186 IPM-VVANPDYVTVEARAL----------------------------------------RV-MPGTLASKFEK---LGG-  219 (313)
Q Consensus       186 ~~~-i~tn~d~~~~~~~~~----------------------------------------~~-~~g~~~~~~~~---~~~-  219 (313)
                      ..+ +.++...........                                        .. .........+.   ... 
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~  183 (290)
T 3dnp_A          104 CNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVIEVYTEHDIQHDITETITKAFPA  183 (290)
T ss_dssp             CEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHSCCCCSEEEEECCGGGHHHHHHHHHHHCTT
T ss_pred             ceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhhCCc
Confidence            766 333322111000000                                        00 00111111111   111 


Q ss_pred             -----------ceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCC
Q 021350          220 -----------EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGI  265 (313)
Q Consensus       220 -----------~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~  265 (313)
                                 +....|.+++..++.+++++|+++++|++|||+. ||++|++++|+
T Consensus       184 ~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~-NDi~m~~~ag~  239 (290)
T 3dnp_A          184 VDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQY-DDLPMIELAGL  239 (290)
T ss_dssp             EEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSG-GGHHHHHHSSE
T ss_pred             EEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHHEEEECCch-hhHHHHHhcCC
Confidence                       2234566777899999999999999999999996 99999999995

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.73  E-value=7.1e-18  Score=144.83  Aligned_cols=103  Identities=19%  Similarity=0.245  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccch-hccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARA-LRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~-~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      ++++.++++.++++|+++ ++||.. .+..... ..+..-.+...++. ........+||+|..|..+++++|++|++|+
T Consensus       101 ~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~  179 (235)
T 2om6_A          101 LEGTKEALQFVKERGLKTAVIGNVM-FWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEESL  179 (235)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEECCC-SSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGGEE
T ss_pred             CccHHHHHHHHHHCCCEEEEEcCCc-ccchhHHHHHHHhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccceE
Confidence            578899999999999988 788876 2211100 00000000011111 1112345689999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGI  274 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~  274 (313)
                      +|||+..+|++||+++|+.++++.+|.
T Consensus       180 ~iGD~~~nDi~~a~~aG~~~~~~~~~~  206 (235)
T 2om6_A          180 HIGDTYAEDYQGARKVGMWAVWINQEG  206 (235)
T ss_dssp             EEESCTTTTHHHHHHTTSEEEEECTTC
T ss_pred             EECCChHHHHHHHHHCCCEEEEECCCC
Confidence            999995499999999999999999984

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=99.73  E-value=5.8e-17  Score=144.19  Aligned_cols=190  Identities=20%  Similarity=0.263  Sum_probs=119.3

Q ss_pred             cCccEEEEeccceeecCCccC-ccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHHHHHHH
Q 021350           28 RRFKAWLLDQFGVLHDGKKPY-PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYL  106 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~~~~-~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l  106 (313)
                      |++|+|+||+||||+++...+ +.+.++|++++++|+.++++|  ||+...+.+.++.+|++... ..+++.+       
T Consensus         3 M~~kli~fDlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaT--GR~~~~~~~~~~~l~~~~~~-~~~i~~n-------   72 (279)
T 4dw8_A            3 LKYKLIVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVLAS--GRPTYGIVPLANELRMNEFG-GFILSYN-------   72 (279)
T ss_dssp             -CCCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEEC--SSCHHHHHHHHHHTTGGGTT-CEEEEGG-------
T ss_pred             CcceEEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCEEEEEc--CCChHHHHHHHHHhCCCCCC-CEEEEeC-------
Confidence            579999999999999987655 678899999999999999999  88888888888888874211 2223222       


Q ss_pred             HhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCC
Q 021350          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKI  186 (313)
Q Consensus       107 ~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~  186 (313)
                                 |..++..                     .....+..             ..++.+.+.++++.+.+.+.
T Consensus        73 -----------Ga~i~~~---------------------~~~~~~~~-------------~~l~~~~~~~i~~~~~~~~~  107 (279)
T 4dw8_A           73 -----------GGEIINW---------------------ESKEMMYE-------------NVLPNEVVPVLYECARTNHL  107 (279)
T ss_dssp             -----------GTEEEET---------------------TTCCEEEE-------------CCCCGGGHHHHHHHHHHTTC
T ss_pred             -----------CeEEEEC---------------------CCCeEEEE-------------ecCCHHHHHHHHHHHHHcCC
Confidence                       2322210                     00011111             33455677777777777777


Q ss_pred             cE-EEEcCCcccccc----------------------------ch---hccCC-chHH---HHHH-HhcC----------
Q 021350          187 PM-VVANPDYVTVEA----------------------------RA---LRVMP-GTLA---SKFE-KLGG----------  219 (313)
Q Consensus       187 ~~-i~tn~d~~~~~~----------------------------~~---~~~~~-g~~~---~~~~-~~~~----------  219 (313)
                      .+ +.++........                            ..   ..... ....   ..+. .++.          
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~  187 (279)
T 4dw8_A          108 SILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKINVFRSEPY  187 (279)
T ss_dssp             EEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCHHHHHHHHHHHHHHTTTTCEEEEEETT
T ss_pred             EEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence            66 333321111000                            00   00001 1111   1111 1211          


Q ss_pred             --ceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCC
Q 021350          220 --EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHA  276 (313)
Q Consensus       220 --~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~  276 (313)
                        +....|++++..++.+++++|+++++|++|||+. ||++|++++|   +.|..|...
T Consensus       188 ~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~-NDi~m~~~ag---~~vam~na~  242 (279)
T 4dw8_A          188 FLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGY-NDLSMIKFAG---MGVAMGNAQ  242 (279)
T ss_dssp             EEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSS---EEEECTTSC
T ss_pred             EEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCh-hhHHHHHHcC---cEEEcCCCc
Confidence              1233566778899999999999999999999996 9999999999   445555443

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.73  E-value=5.8e-19  Score=152.17  Aligned_cols=96  Identities=23%  Similarity=0.325  Sum_probs=65.0

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++++.++++|+++ ++||.+.....-.  .+   .+...++. .+.+....+||+|..|+.+++++|++|++|+|
T Consensus        94 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~l~--~~---gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~  168 (233)
T 3nas_A           94 LPGIGRLLCQLKNENIKIGLASSSRNAPKILR--RL---AIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAA  168 (233)
T ss_dssp             CTTHHHHHHHHHHTTCEEEECCSCTTHHHHHH--HT---TCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEEE
T ss_pred             CcCHHHHHHHHHHCCCcEEEEcCchhHHHHHH--Hc---CcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEE
Confidence            478889999999999998 7888644111000  00   11112222 23445667999999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcC
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIG  272 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~  272 (313)
                      |||+. +|++||+++|+.++++.+
T Consensus       169 vGDs~-~Di~~a~~aG~~~~~~~~  191 (233)
T 3nas_A          169 IEDAE-AGISAIKSAGMFAVGVGQ  191 (233)
T ss_dssp             EECSH-HHHHHHHHTTCEEEECC-
T ss_pred             EeCCH-HHHHHHHHcCCEEEEECC
Confidence            99996 999999999999999965

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.72  E-value=1.3e-17  Score=143.42  Aligned_cols=104  Identities=19%  Similarity=0.253  Sum_probs=74.5

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.+.++.++++ +++ ++||.+..........++   +...++. .+......+||+|..|+.+++++|++|++|++
T Consensus       102 ~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~---~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  177 (234)
T 3u26_A          102 YPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALG---IKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVY  177 (234)
T ss_dssp             CTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTT---CGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcC---cHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhEEE
Confidence            47888899999888 887 788876522211100000   0011111 11223456899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      |||+..+|++||+++|+.+++|.+|....+
T Consensus       178 vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~  207 (234)
T 3u26_A          178 VGDNPVKDCGGSKNLGMTSILLDRKGEKRE  207 (234)
T ss_dssp             EESCTTTTHHHHHTTTCEEEEECSSSTTGG
T ss_pred             EcCCcHHHHHHHHHcCCEEEEECCCCCccc
Confidence            999955999999999999999999865443

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.71  E-value=7.9e-19  Score=149.08  Aligned_cols=104  Identities=17%  Similarity=0.246  Sum_probs=74.6

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.+.++.++++ +++ ++||.........   +..-.+...++. ........+||+|..|+.+++++|++|++|++
T Consensus        85 ~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~---l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~  160 (209)
T 2hdo_A           85 YPGITSLFEQLPSE-LRLGIVTSQRRNELESG---MRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALF  160 (209)
T ss_dssp             CTTHHHHHHHSCTT-SEEEEECSSCHHHHHHH---HTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred             CCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHH---HHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEE
Confidence            36788888888777 887 7888654221111   111111111222 12334467899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                      |||+ .+|+.+|+++|+.++++.+|....+.
T Consensus       161 vGD~-~~Di~~a~~aG~~~~~~~~~~~~~~~  190 (209)
T 2hdo_A          161 IGDS-VSDEQTAQAANVDFGLAVWGMDPNAD  190 (209)
T ss_dssp             EESS-HHHHHHHHHHTCEEEEEGGGCCTTGG
T ss_pred             ECCC-hhhHHHHHHcCCeEEEEcCCCCChhh
Confidence            9999 59999999999999999998765443

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.71  E-value=1.7e-18  Score=151.00  Aligned_cols=102  Identities=17%  Similarity=0.158  Sum_probs=72.3

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++++.++++ .++ ++||.+..........++..     ++. ...+....+||+|.+|+.+++++|++|++|++
T Consensus       122 ~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~-----f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~  195 (254)
T 3umc_A          122 WPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP-----WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVML  195 (254)
T ss_dssp             CTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC-----CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC-----cceEEeecccccCCCCHHHHHHHHHHcCCChHHEEE
Confidence            46788888888765 666 77886542211110000000     111 12234567899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEc----CCCCCCcc
Q 021350          249 VGDSLHHDIKGANAAGIQSVFII----GGIHATEL  279 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~----~G~~~~~~  279 (313)
                      |||+. +|++||+++|+.++++.    +|....++
T Consensus       196 iGD~~-~Di~~a~~aG~~~~~~~~~~~~g~~~~~~  229 (254)
T 3umc_A          196 CAAHN-YDLKAARALGLKTAFIARPLEYGPGQSQD  229 (254)
T ss_dssp             EESCH-HHHHHHHHTTCEEEEECCTTTTCTTCCSS
T ss_pred             EcCch-HhHHHHHHCCCeEEEEecCCccCCCCCcc
Confidence            99995 99999999999999999    66655544

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=99.71  E-value=1.7e-16  Score=140.45  Aligned_cols=183  Identities=17%  Similarity=0.187  Sum_probs=116.2

Q ss_pred             CccEEEEeccceeecCCccC-ccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHHHHHHHH
Q 021350           29 RFKAWLLDQFGVLHDGKKPY-PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLL  107 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~~~-~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l~  107 (313)
                      .+|+|+||+||||+++...+ +.+.++|++++++|+.++++|  +|+...+...++.+|++.     ++..+        
T Consensus         4 M~kli~fDlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaT--GR~~~~~~~~~~~~~~~~-----~i~~n--------   68 (274)
T 3fzq_A            4 LYKLLILDIDGTLRDEVYGIPESAKHAIRLCQKNHCSVVICT--GRSMGTIQDDVLSLGVDG-----YIAGG--------   68 (274)
T ss_dssp             CCCEEEECSBTTTBBTTTBCCHHHHHHHHHHHHTTCEEEEEC--SSCTTTSCHHHHTTCCSE-----EEETT--------
T ss_pred             cceEEEEECCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEe--CCChHHHHHHHHHcCCCE-----EEecC--------
Confidence            58999999999999987655 568899999999999999999  777777767777777641     22222        


Q ss_pred             hcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCc
Q 021350          108 RRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIP  187 (313)
Q Consensus       108 ~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~  187 (313)
                                |..++.             .           ...+.            ...++.+.+.++++.+++.+..
T Consensus        69 ----------Ga~i~~-------------~-----------~~~~~------------~~~l~~~~~~~i~~~~~~~~~~  102 (274)
T 3fzq_A           69 ----------GNYIQY-------------H-----------GELLY------------NQSFNQRLIKEVVCLLKKREVA  102 (274)
T ss_dssp             ----------TTEEEE-------------T-----------TEEEE------------ECCCCHHHHHHHHHHHHHHTCE
T ss_pred             ----------ccEEEE-------------C-----------CEEEE------------EcCCCHHHHHHHHHHHHHCCce
Confidence                      332220             0           01111            0334567777777777777776


Q ss_pred             EEEEcCCccccccc---------------------------------------h----hccCCc-hHHHHHHHhcC----
Q 021350          188 MVVANPDYVTVEAR---------------------------------------A----LRVMPG-TLASKFEKLGG----  219 (313)
Q Consensus       188 ~i~tn~d~~~~~~~---------------------------------------~----~~~~~g-~~~~~~~~~~~----  219 (313)
                      +.+...+..+....                                       .    ...... .+..+.+.+..    
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~  182 (274)
T 3fzq_A          103 FSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEYKSQDIHKICLWSNEKVFDEVKDILQDKMEL  182 (274)
T ss_dssp             EEEECSSCEEECHHHHHHHHHHHHTTTSCCTTHHHHCCSSSCCCCCGGGCSSCCCCEEEEECCHHHHHHHHHHHGGGEEE
T ss_pred             EEEEeCCceEeCCchHHHHHHHHhhhccchhhhhhhhhhhcccccchhhhcccCeEEEEEEcCHHHHHHHHHHhhcceEE
Confidence            63322221111000                                       0    000011 11222222221    


Q ss_pred             ----------ceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCC
Q 021350          220 ----------EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHA  276 (313)
Q Consensus       220 ----------~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~  276 (313)
                                +....+++++..++.+++++|+++++|++|||+. ||++|++++|+   .|..|...
T Consensus       183 ~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~-NDi~m~~~ag~---~vam~na~  245 (274)
T 3fzq_A          183 AQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQ-NDIVMFQASDV---TIAMKNSH  245 (274)
T ss_dssp             EEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSG-GGHHHHHTCSE---EEEETTSC
T ss_pred             EeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCCh-hHHHHHHhcCc---eEEecCcc
Confidence                      1345677888899999999999999999999996 99999999993   34444443

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.71  E-value=2.6e-18  Score=149.39  Aligned_cols=104  Identities=25%  Similarity=0.378  Sum_probs=76.3

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++++.++++|+++ ++||............++   +...++. ...+....+||+|..|+.+++++|++|++|+|
T Consensus        96 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~---l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~  172 (241)
T 2hoq_A           96 VPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLE---LDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALM  172 (241)
T ss_dssp             CTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTT---CGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred             CccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcC---cHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence            478889999999999988 889865422211100011   1111221 12234457899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHAT  277 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~  277 (313)
                      |||+..+|+.+|+++|+.+++|.+|....
T Consensus       173 iGD~~~~Di~~a~~aG~~~~~v~~g~~~~  201 (241)
T 2hoq_A          173 VGDRLYSDIYGAKRVGMKTVWFRYGKHSE  201 (241)
T ss_dssp             EESCTTTTHHHHHHTTCEEEEECCSCCCH
T ss_pred             ECCCchHhHHHHHHCCCEEEEECCCCCCc
Confidence            99995599999999999999998886543

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.71  E-value=3.8e-17  Score=143.90  Aligned_cols=101  Identities=18%  Similarity=0.214  Sum_probs=72.4

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHH-HH-hcCceeecCCCCHHHHHHHHHHhCCCC-CcE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKF-EK-LGGEVRWMGKPDKIIYKSAMAMVGVDA-CDS  246 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~-~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~-~~~  246 (313)
                      ++++.+.+..++++|+++ ++||............+   .+...+ +. .+.+....+||+|..|..+++++|+++ ++|
T Consensus       105 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~  181 (267)
T 1swv_A          105 INGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEA---ALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHM  181 (267)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHH---HHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGE
T ss_pred             CccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHc---CCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCCCcCE
Confidence            467888888888899988 77775532111000000   000000 11 122334568999999999999999999 999


Q ss_pred             EEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          247 IAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       247 v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      ++|||+. +|++||+++|+.+++|.+|..
T Consensus       182 i~iGD~~-nDi~~a~~aG~~~i~v~~~~~  209 (267)
T 1swv_A          182 IKVGDTV-SDMKEGRNAGMWTVGVILGSS  209 (267)
T ss_dssp             EEEESSH-HHHHHHHHTTSEEEEECTTCT
T ss_pred             EEEeCCH-HHHHHHHHCCCEEEEEcCCCC
Confidence            9999997 999999999999999999876

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.71  E-value=6.9e-18  Score=146.63  Aligned_cols=102  Identities=19%  Similarity=0.261  Sum_probs=72.9

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.+.++.++++ +++ ++||.+..........++..     ++. .+......+||+|..|+.+++++|++|++|++
T Consensus       118 ~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~-----f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~  191 (254)
T 3umg_A          118 WPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP-----WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVML  191 (254)
T ss_dssp             CTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC-----CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEEE
T ss_pred             CcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC-----eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEEE
Confidence            57888888888776 776 77886542211100000000     111 12234467899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEc----CCCCCCcc
Q 021350          249 VGDSLHHDIKGANAAGIQSVFII----GGIHATEL  279 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~----~G~~~~~~  279 (313)
                      |||+. +|+++|+++|+.+++|.    +|....+.
T Consensus       192 iGD~~-~Di~~a~~aG~~~~~~~~~~~~g~~~~~~  225 (254)
T 3umg_A          192 AAAHN-GDLEAAHATGLATAFILRPVEHGPHQTDD  225 (254)
T ss_dssp             EESCH-HHHHHHHHTTCEEEEECCTTTTCTTCCSC
T ss_pred             EeCCh-HhHHHHHHCCCEEEEEecCCcCCCCcccc
Confidence            99995 99999999999999999    66655544

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.71  E-value=1.3e-17  Score=144.65  Aligned_cols=119  Identities=21%  Similarity=0.283  Sum_probs=85.3

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCC-CCcEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVD-ACDSI  247 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~-~~~~v  247 (313)
                      ++++.++++.++++|+++ ++||............++   +...++. +..+....+||++..|..+++++|++ |++|+
T Consensus       112 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~---l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i  188 (240)
T 3sd7_A          112 YENMKEILEMLYKNGKILLVATSKPTVFAETILRYFD---IDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVI  188 (240)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTT---CGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEE
T ss_pred             CccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcC---cHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEE
Confidence            468889999999999988 788754321111000000   1111111 12234567899999999999999999 99999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS  312 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  312 (313)
                      +|||+. +|+++|+++|+.+++|.+|....+.                 +.+  ..|+|+++++.
T Consensus       189 ~vGD~~-~Di~~a~~aG~~~i~v~~g~~~~~~-----------------~~~--~~ad~v~~~~~  233 (240)
T 3sd7_A          189 MVGDRK-YDIIGAKKIGIDSIGVLYGYGSFEE-----------------ISE--SEPTYIVENVE  233 (240)
T ss_dssp             EEESSH-HHHHHHHHHTCEEEEESSSSCCHHH-----------------HHH--HCCSEEESSST
T ss_pred             EECCCH-HHHHHHHHCCCCEEEEeCCCCCHHH-----------------Hhh--cCCCEEECCHH
Confidence            999997 9999999999999999998765543                 211  36888888774

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=99.70  E-value=3.9e-16  Score=138.82  Aligned_cols=189  Identities=16%  Similarity=0.150  Sum_probs=107.2

Q ss_pred             cCccEEEEeccceeecCCccC-ccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHHHHHHH
Q 021350           28 RRFKAWLLDQFGVLHDGKKPY-PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYL  106 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~~~~-~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l  106 (313)
                      |++|+|+||+||||+++...+ +.+.++|++++++|+.++++|  ||+...+.+.++.+|++.+. ..+++.+       
T Consensus         3 m~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaT--GR~~~~~~~~~~~l~~~~~~-~~~i~~n-------   72 (279)
T 3mpo_A            3 LTIKLIAIDIDGTLLNEKNELAQATIDAVQAAKAQGIKVVLCT--GRPLTGVQPYLDAMDIDGDD-QYAITFN-------   72 (279)
T ss_dssp             --CCEEEECC-----------CHHHHHHHHHHHHTTCEEEEEC--SSCHHHHHHHHHHTTCCSSS-CEEEEGG-------
T ss_pred             cceEEEEEcCcCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEc--CCCHHHHHHHHHHcCCCCCC-CEEEEcC-------
Confidence            569999999999999987655 678899999999999999999  88888888889999987433 3344443       


Q ss_pred             HhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCC
Q 021350          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKI  186 (313)
Q Consensus       107 ~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~  186 (313)
                                 |. ++..                     .....+..             ..++.+.+.++++.+++.+.
T Consensus        73 -----------Ga-i~~~---------------------~~~~~~~~-------------~~~~~~~~~~i~~~~~~~~~  106 (279)
T 3mpo_A           73 -----------GS-VAQT---------------------ISGKVLTN-------------HSLTYEDYIDLEAWARKVRA  106 (279)
T ss_dssp             -----------GT-EEEE---------------------TTSCEEEE-------------CCCCHHHHHHHHHHHHHTTC
T ss_pred             -----------cE-EEEC---------------------CCCCEEEe-------------cCCCHHHHHHHHHHHHHcCC
Confidence                       33 2210                     00011111             33566778888888877777


Q ss_pred             cE-EEEcCCccccccc---------------------------h-----hccCC-chHHHHHHHh------------cC-
Q 021350          187 PM-VVANPDYVTVEAR---------------------------A-----LRVMP-GTLASKFEKL------------GG-  219 (313)
Q Consensus       187 ~~-i~tn~d~~~~~~~---------------------------~-----~~~~~-g~~~~~~~~~------------~~-  219 (313)
                      .+ +.++.........                           .     ..... .......+.+            +. 
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~  186 (279)
T 3mpo_A          107 HFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFKDRFSVVQSAP  186 (279)
T ss_dssp             CEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHHHHEEEECCSS
T ss_pred             eEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhCCCEEEEEecC
Confidence            77 3443221110000                           0     00001 1111111111            01 


Q ss_pred             ---ceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCC
Q 021350          220 ---EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHA  276 (313)
Q Consensus       220 ---~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~  276 (313)
                         +....|..++..++.+++++|+++++|++|||+. ||++|++++|   +.|..|...
T Consensus       187 ~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~-NDi~m~~~ag---~~vam~na~  242 (279)
T 3mpo_A          187 YFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQG-NDLTMIKYAG---LGVAMGNAI  242 (279)
T ss_dssp             SEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CC-TTHHHHHHST---EECBC---C
T ss_pred             ceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCch-hhHHHHHhcC---ceeeccCCC
Confidence               1122344466699999999999999999999996 9999999999   344444443

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.70  E-value=3.9e-17  Score=137.23  Aligned_cols=51  Identities=14%  Similarity=0.244  Sum_probs=46.5

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHAT  277 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~  277 (313)
                      +|+|..|..+++++|++|++|++|||+. +|+.+|+++|+.+++|.+|....
T Consensus       120 ~~k~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~aG~~~i~v~~g~~~~  170 (187)
T 2wm8_A          120 GSKITHFERLQQKTGIPFSQMIFFDDER-RNIVDVSKLGVTCIHIQNGMNLQ  170 (187)
T ss_dssp             SCHHHHHHHHHHHHCCCGGGEEEEESCH-HHHHHHHTTTCEEEECSSSCCHH
T ss_pred             CchHHHHHHHHHHcCCChHHEEEEeCCc-cChHHHHHcCCEEEEECCCCChH
Confidence            4566789999999999999999999995 99999999999999999997644

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.69  E-value=6.1e-18  Score=149.61  Aligned_cols=102  Identities=25%  Similarity=0.361  Sum_probs=73.9

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.++|+.|++ ++++ ++||.+..........++   +...++. +.......+||+|++|+.+++++|++|++|+
T Consensus       122 ~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~g---l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~  197 (260)
T 2gfh_A          122 LADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACA---CQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCV  197 (260)
T ss_dssp             CCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHT---CGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             CCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcC---HHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhEE
Confidence            35899999999987 5777 899976533221110111   1112222 2233455789999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCC-cEEEEcCCCC
Q 021350          248 AVGDSLHHDIKGANAAGI-QSVFIIGGIH  275 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~-~~i~V~~G~~  275 (313)
                      ||||+..+|+.+|+++|+ .+++|.++..
T Consensus       198 ~vGDs~~~Di~~A~~aG~~~~i~v~~~~~  226 (260)
T 2gfh_A          198 MVGDTLETDIQGGLNAGLKATVWINKSGR  226 (260)
T ss_dssp             EEESCTTTHHHHHHHTTCSEEEEECTTCC
T ss_pred             EECCCchhhHHHHHHCCCceEEEEcCCCC
Confidence            999963499999999999 8999987643

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.68  E-value=4.5e-18  Score=148.59  Aligned_cols=104  Identities=23%  Similarity=0.219  Sum_probs=76.1

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.+.++.++++|+++ ++||............++   +...+.. .+......+||+|..|..+++++|+++++|+|
T Consensus       116 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~g---l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  192 (243)
T 2hsz_A          116 YPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFG---IDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILF  192 (243)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTT---CGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             CCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcC---chheEEEEEecccCCCCCcCHHHHHHHHHHhCcChhhEEE
Confidence            367889999999999998 888865422111100011   1111121 12334456899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      |||+. +|+.+|+++|+.+++|.+|.....
T Consensus       193 vGD~~-~Di~~a~~aG~~~i~v~~g~~~~~  221 (243)
T 2hsz_A          193 VGDSQ-NDIFAAHSAGCAVVGLTYGYNYNI  221 (243)
T ss_dssp             EESSH-HHHHHHHHHTCEEEEESSSCSTTC
T ss_pred             EcCCH-HHHHHHHHCCCeEEEEcCCCCchh
Confidence            99996 999999999999999999876433

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.68  E-value=1.7e-17  Score=141.42  Aligned_cols=104  Identities=18%  Similarity=0.303  Sum_probs=74.4

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.+.++.+++.|+++ ++||............++   +...+.. ........+||++..++.+++++|+++++|++
T Consensus        96 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~  172 (226)
T 1te2_A           96 LPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFD---LRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVA  172 (226)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTT---CGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEE
T ss_pred             CccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcC---cHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence            356788888888889887 788765322111000000   1111111 12234457899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      |||+. +|++||+++|+.+++|.+|....+
T Consensus       173 iGD~~-nDi~~a~~aG~~~~~~~~~~~~~~  201 (226)
T 1te2_A          173 LEDSV-NGMIASKAARMRSIVVPAPEAQND  201 (226)
T ss_dssp             EESSH-HHHHHHHHTTCEEEECCCTTTTTC
T ss_pred             EeCCH-HHHHHHHHcCCEEEEEcCCCCccc
Confidence            99996 999999999999999999865443

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.68  E-value=3.5e-17  Score=139.36  Aligned_cols=104  Identities=20%  Similarity=0.177  Sum_probs=73.7

Q ss_pred             HHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEE
Q 021350          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAV  249 (313)
Q Consensus       172 ~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~I  249 (313)
                      +++.+.++.+++.|+++ ++||............++   +...++. ........+||++..|..+++++|+++++|++|
T Consensus        92 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i~i  168 (225)
T 3d6j_A           92 PDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHM---PDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYI  168 (225)
T ss_dssp             TTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSS---CTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEEEE
T ss_pred             cCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcC---chhheeeeeehhhcCCCCCChHHHHHHHHHhCCChHHeEEE
Confidence            57788888888888887 778765322111100010   0011111 122334568999999999999999999999999


Q ss_pred             cCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          250 GDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       250 GDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                      ||+. +|++||+++|+.+++|.+|......
T Consensus       169 GD~~-nDi~~~~~aG~~~~~~~~~~~~~~~  197 (225)
T 3d6j_A          169 GDST-VDAGTAAAAGVSFTGVTSGMTTAQE  197 (225)
T ss_dssp             ESSH-HHHHHHHHHTCEEEEETTSSCCTTG
T ss_pred             cCCH-HHHHHHHHCCCeEEEECCCCCChHH
Confidence            9996 9999999999999999998665444

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.67  E-value=4.6e-16  Score=138.45  Aligned_cols=103  Identities=14%  Similarity=0.090  Sum_probs=73.3

Q ss_pred             CHHHHHHHHHHHHhCCC--cE-EEEcCCccccccchhccCCchHHHHHHH-hcC----ceeecCCCCHHHHHHHHHHhCC
Q 021350          170 SLQDLEKILEICASKKI--PM-VVANPDYVTVEARALRVMPGTLASKFEK-LGG----EVRWMGKPDKIIYKSAMAMVGV  241 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~--~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~----~~~~~gKP~~~~~~~~~~~lgv  241 (313)
                      .++++.++++.++++|+  ++ ++||............++   +...++. +..    .....+||+|..|+.+++++|+
T Consensus       143 ~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~g---l~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi  219 (282)
T 3nuq_A          143 PDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLG---IADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGL  219 (282)
T ss_dssp             CCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHT---CTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHTC
T ss_pred             cChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCC---cccccceEEEeccCCCcccCCCcCHHHHHHHHHHcCC
Confidence            46899999999999999  88 788866432211100000   0011111 111    1125679999999999999999


Q ss_pred             CC-CcEEEEcCCchhhHHHHHHcCC-cEEEEcCCCCC
Q 021350          242 DA-CDSIAVGDSLHHDIKGANAAGI-QSVFIIGGIHA  276 (313)
Q Consensus       242 ~~-~~~v~IGDs~~~Di~~a~~aG~-~~i~V~~G~~~  276 (313)
                      +| ++|++|||+. +|+.||+++|+ .++++.++...
T Consensus       220 ~~~~~~i~vGD~~-~Di~~a~~aG~~~~~~~~~~~~~  255 (282)
T 3nuq_A          220 ARYENAYFIDDSG-KNIETGIKLGMKTCIHLVENEVN  255 (282)
T ss_dssp             CCGGGEEEEESCH-HHHHHHHHHTCSEEEEECSCCC-
T ss_pred             CCcccEEEEcCCH-HHHHHHHHCCCeEEEEEcCCccc
Confidence            99 9999999997 99999999999 77788776643

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.67  E-value=1.5e-17  Score=140.58  Aligned_cols=102  Identities=18%  Similarity=0.259  Sum_probs=77.0

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.+.++.++++|+++ ++||.............  -.+...++. ++......+||+|..|..+++++|++|++|++
T Consensus        93 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~--~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  170 (206)
T 2b0c_A           93 RPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEY--PEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVF  170 (206)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGC--HHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred             CccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhc--cChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence            489999999999999988 88986553322111000  122233332 23334567899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      |||+. +|+.+|+++|+.++++.+|..
T Consensus       171 vgD~~-~Di~~a~~aG~~~~~~~~~~~  196 (206)
T 2b0c_A          171 FDDNA-DNIEGANQLGITSILVKDKTT  196 (206)
T ss_dssp             EESCH-HHHHHHHTTTCEEEECCSTTH
T ss_pred             eCCCH-HHHHHHHHcCCeEEEecCCch
Confidence            99996 999999999999999998754

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.67  E-value=1e-16  Score=141.46  Aligned_cols=99  Identities=13%  Similarity=0.082  Sum_probs=66.6

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCc--------hHHHHHHHhcCceeecCCCCHHHHHHHHHHhC
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPG--------TLASKFEKLGGEVRWMGKPDKIIYKSAMAMVG  240 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lg  240 (313)
                      .++++.++|+.    |+++ ++||...............|        .+...+...-.....-+||+|++|+.+++++|
T Consensus       126 ~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~~g~KP~p~~~~~a~~~lg  201 (253)
T 2g80_A          126 VYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILRDIG  201 (253)
T ss_dssp             CCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEeeeccCCCCCHHHHHHHHHHcC
Confidence            35888888875    8888 89997653221110001000        01011110000000025999999999999999


Q ss_pred             CCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350          241 VDACDSIAVGDSLHHDIKGANAAGIQSVFIIGG  273 (313)
Q Consensus       241 v~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G  273 (313)
                      ++|++|+||||+. +|+++|+++|+.+++|.++
T Consensus       202 ~~p~~~l~vgDs~-~di~aA~~aG~~~i~v~~~  233 (253)
T 2g80_A          202 AKASEVLFLSDNP-LELDAAAGVGIATGLASRP  233 (253)
T ss_dssp             CCGGGEEEEESCH-HHHHHHHTTTCEEEEECCT
T ss_pred             CCcccEEEEcCCH-HHHHHHHHcCCEEEEEcCC
Confidence            9999999999996 9999999999999999884

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.67  E-value=3e-17  Score=136.95  Aligned_cols=51  Identities=24%  Similarity=0.267  Sum_probs=43.9

Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       224 ~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      ..||+|.+|+.+++++|++|++|+||||+. +|+.+|+++|+.+++|.+|..
T Consensus       114 ~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~-~Di~~A~~aG~~~i~v~~~~~  164 (176)
T 2fpr_A          114 CRKPKVKLVERYLAEQAMDRANSYVIGDRA-TDIQLAENMGINGLRYDRETL  164 (176)
T ss_dssp             SSTTSCGGGGGGC----CCGGGCEEEESSH-HHHHHHHHHTSEEEECBTTTB
T ss_pred             ccCCCHHHHHHHHHHcCCCHHHEEEEcCCH-HHHHHHHHcCCeEEEEcCCcc
Confidence            449999999999999999999999999997 999999999999999999754

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.66  E-value=4.1e-17  Score=137.46  Aligned_cols=104  Identities=16%  Similarity=0.226  Sum_probs=75.6

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.++++.++++| ++ ++||.+..........+   .+...++. ........+||+|..|..+++++|++|++|+
T Consensus        87 ~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~---~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  162 (200)
T 3cnh_A           87 PRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTF---GLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAV  162 (200)
T ss_dssp             BCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHH---TGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             cCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhC---CHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence            4689999999999999 87 88986543221110000   01111111 1122345789999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      +|||+. +|+.+|+++|+.+++|.+|....+
T Consensus       163 ~vgD~~-~Di~~a~~aG~~~~~~~~~~~~~~  192 (200)
T 3cnh_A          163 MVDDRL-QNVQAARAVGMHAVQCVDAAQLRE  192 (200)
T ss_dssp             EEESCH-HHHHHHHHTTCEEEECSCHHHHHH
T ss_pred             EeCCCH-HHHHHHHHCCCEEEEECCchhhHH
Confidence            999997 999999999999999998765443

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.66  E-value=3.3e-16  Score=132.19  Aligned_cols=52  Identities=27%  Similarity=0.397  Sum_probs=47.4

Q ss_pred             ecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350          223 WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHAT  277 (313)
Q Consensus       223 ~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~  277 (313)
                      ..+||+|..|..+++++|  |++|+||||+. +|+++|+++|+.+++|.+|....
T Consensus       125 ~~~Kp~~~~~~~~~~~~~--~~~~~~vGD~~-~Di~~a~~aG~~~~~~~~~~~~~  176 (201)
T 2w43_A          125 KEYKPSPKVYKYFLDSIG--AKEAFLVSSNA-FDVIGAKNAGMRSIFVNRKNTIV  176 (201)
T ss_dssp             TCCTTCHHHHHHHHHHHT--CSCCEEEESCH-HHHHHHHHTTCEEEEECSSSCCC
T ss_pred             CCCCCCHHHHHHHHHhcC--CCcEEEEeCCH-HHhHHHHHCCCEEEEECCCCCCc
Confidence            346999999999999999  99999999996 89999999999999999976543

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.66  E-value=5.6e-18  Score=150.79  Aligned_cols=100  Identities=16%  Similarity=0.063  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHHhC-CCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCC------
Q 021350          171 LQDLEKILEICASK-KIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGV------  241 (313)
Q Consensus       171 ~~~~~~~l~~l~~~-g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv------  241 (313)
                      ++++.++++.++++ |+++ ++||............++...    ++. .+......+||+|..|+.+++++|+      
T Consensus       116 ~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~----f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~  191 (275)
T 2qlt_A          116 VPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR----PEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQD  191 (275)
T ss_dssp             CTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC----CSSEECGGGCSSCTTSSHHHHHHHHHTTCCCCSSC
T ss_pred             CcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc----cCEEEEcccCCCCCCChHHHHHHHHHcCCCccccC
Confidence            46788889998888 8887 788765422111100010000    111 1223456789999999999999999      


Q ss_pred             -CCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          242 -DACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       242 -~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                       +|++|++|||+. +|++||+++|+.+++|.+|..
T Consensus       192 ~~~~~~i~~GDs~-nDi~~a~~AG~~~i~v~~~~~  225 (275)
T 2qlt_A          192 PSKSKVVVFEDAP-AGIAAGKAAGCKIVGIATTFD  225 (275)
T ss_dssp             GGGSCEEEEESSH-HHHHHHHHTTCEEEEESSSSC
T ss_pred             CCcceEEEEeCCH-HHHHHHHHcCCEEEEECCCCC
Confidence             999999999996 999999999999999999854

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.66  E-value=8e-17  Score=141.13  Aligned_cols=96  Identities=18%  Similarity=0.230  Sum_probs=70.6

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++++.++  |+++ ++||............++   +...++. .+......+||+|..|+.+++++|++|++|+|
T Consensus        95 ~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~g---l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  169 (253)
T 1qq5_A           95 YPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAG---LTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF  169 (253)
T ss_dssp             CTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTT---CGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred             CccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCC---chhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEEE
Confidence            467888888876  8887 889876532211100010   1111221 12334557899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcC
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIG  272 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~  272 (313)
                      |||+. +|+++|+++|+.++++.+
T Consensus       170 vGD~~-~Di~~a~~aG~~~~~~~~  192 (253)
T 1qq5_A          170 VSSNG-FDVGGAKNFGFSVARVAR  192 (253)
T ss_dssp             EESCH-HHHHHHHHHTCEEEEECC
T ss_pred             EeCCh-hhHHHHHHCCCEEEEECC
Confidence            99996 999999999999999998

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=99.66  E-value=6.6e-16  Score=134.10  Aligned_cols=58  Identities=12%  Similarity=0.171  Sum_probs=49.9

Q ss_pred             CccEEEEeccceeecCCccC-ccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           29 RFKAWLLDQFGVLHDGKKPY-PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~~~-~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      .+|+|+||+||||+++...+ +.+.++|++++++|++++++|  +|+.......++.+|++
T Consensus         2 m~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~v~i~T--GR~~~~~~~~~~~l~~~   60 (231)
T 1wr8_A            2 KIKAISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIMLVT--GNTVQFAEAASILIGTS   60 (231)
T ss_dssp             CCCEEEEESTTTTBCTTSCBCHHHHHHHHHHHHTTCCEEEEC--SSCHHHHHHHHHHHTCC
T ss_pred             ceeEEEEECCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEc--CCChhHHHHHHHHcCCC
Confidence            38999999999999977654 678999999999999999999  88887777777777775

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.65  E-value=3.5e-17  Score=139.31  Aligned_cols=95  Identities=21%  Similarity=0.249  Sum_probs=69.5

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.+.++.+++.|+++ ++||.......-.  .+   .+...++. ........+||+|..|+.+++++|++|++|++
T Consensus        93 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~l~--~~---~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~  167 (221)
T 2wf7_A           93 YPGILQLLKDLRSNKIKIALASASKNGPFLLE--RM---NLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIG  167 (221)
T ss_dssp             CTTHHHHHHHHHHTTCEEEECCCCTTHHHHHH--HT---TCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred             CCCHHHHHHHHHHCCCeEEEEcCcHHHHHHHH--Hc---ChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHeEE
Confidence            367788888888899988 7777621100000  01   11111222 23345568899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEc
Q 021350          249 VGDSLHHDIKGANAAGIQSVFII  271 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~  271 (313)
                      |||+. +|++||+++|+.++++.
T Consensus       168 iGD~~-nDi~~a~~aG~~~~~~~  189 (221)
T 2wf7_A          168 LEDSQ-AGIQAIKDSGALPIGVG  189 (221)
T ss_dssp             EESSH-HHHHHHHHHTCEEEEES
T ss_pred             EeCCH-HHHHHHHHCCCEEEEEC
Confidence            99996 99999999999999984

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=99.65  E-value=1.2e-15  Score=134.28  Aligned_cols=180  Identities=18%  Similarity=0.203  Sum_probs=111.6

Q ss_pred             cCccEEEEeccceeecCCccC-ccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHHHHHHH
Q 021350           28 RRFKAWLLDQFGVLHDGKKPY-PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYL  106 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~~~~-~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l  106 (313)
                      |++|+|+||+||||+++.+.+ +.+.+++++++++|++++++|  ||+.......++.+|++.     +++.+       
T Consensus         1 M~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~~aT--GR~~~~~~~~~~~l~~~~-----~i~~n-------   66 (258)
T 2pq0_A            1 MGRKIVFFDIDGTLLDEQKQLPLSTIEAVRRLKQSGVYVAIAT--GRAPFMFEHVRKQLGIDS-----FVSFN-------   66 (258)
T ss_dssp             -CCCEEEECTBTTTBCTTSCCCHHHHHHHHHHHHTTCEEEEEC--SSCGGGSHHHHHHHTCCC-----EEEGG-------
T ss_pred             CCceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCEEEEEC--CCChHHHHHHHHhcCCCE-----EEECC-------
Confidence            468999999999999977655 568899999999999999999  888777777777777641     22222       


Q ss_pred             HhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCC
Q 021350          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKI  186 (313)
Q Consensus       107 ~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~  186 (313)
                                 |..++.             .           +.++..            ..++.+.+.++++.+++.+.
T Consensus        67 -----------Ga~i~~-------------~-----------~~~i~~------------~~~~~~~~~~i~~~~~~~~~   99 (258)
T 2pq0_A           67 -----------GQYVVF-------------E-----------GNVLYK------------QPLRREKVRALTEEAHKNGH   99 (258)
T ss_dssp             -----------GTEEEE-------------T-----------TEEEEE------------CCCCHHHHHHHHHHHHHTTC
T ss_pred             -----------CCEEEE-------------C-----------CEEEEE------------ecCCHHHHHHHHHHHHhCCC
Confidence                       332221             0           011110            33566788888888877777


Q ss_pred             cE-EEEcCCccccccc-----------h-----h--------------ccCCch-HHHHHHHh--------cCc---eee
Q 021350          187 PM-VVANPDYVTVEAR-----------A-----L--------------RVMPGT-LASKFEKL--------GGE---VRW  223 (313)
Q Consensus       187 ~~-i~tn~d~~~~~~~-----------~-----~--------------~~~~g~-~~~~~~~~--------~~~---~~~  223 (313)
                      .+ +.++.........           .     .              ...... .....+..        +..   ...
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~  179 (258)
T 2pq0_A          100 PLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCRAEEEEPYVRNYPEFRFVRWHDVSTDVLP  179 (258)
T ss_dssp             CEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSCHHHHHHHHHHCTTEEEEEEETTEEEEEE
T ss_pred             eEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECCHHHHHHHHHhCCCeEEEEeCCceEEEEE
Confidence            76 3433331111000           0     0              000000 11111111        111   122


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEE
Q 021350          224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFI  270 (313)
Q Consensus       224 ~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V  270 (313)
                      .|-.+...++.+++++|+++++|++|||+. ||++|++.+|+. +.+
T Consensus       180 ~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~-NDi~ml~~ag~~-vam  224 (258)
T 2pq0_A          180 AGGSKAEGIRMMIEKLGIDKKDVYAFGDGL-NDIEMLSFVGTG-VAM  224 (258)
T ss_dssp             SSCCHHHHHHHHHHHHTCCGGGEEEECCSG-GGHHHHHHSSEE-EEE
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEECCcH-HhHHHHHhCCcE-EEe
Confidence            233334489999999999999999999996 999999999974 444

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.65  E-value=5.5e-15  Score=130.58  Aligned_cols=174  Identities=22%  Similarity=0.307  Sum_probs=104.5

Q ss_pred             CccEEEEeccceeec-CC-ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHHHHHHH
Q 021350           29 RFKAWLLDQFGVLHD-GK-KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYL  106 (313)
Q Consensus        29 ~~k~iifDlDGTL~~-~~-~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l  106 (313)
                      .+|+|+||+||||++ +. .+.+.+.++|++++++|++++++|  +|+...+ +.+.++++.     .++..+       
T Consensus        11 miKli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~G~~~~iaT--GR~~~~~-~~~~~l~~~-----~~i~~n-------   75 (268)
T 3r4c_A           11 MIKVLLLDVDGTLLSFETHKVSQSSIDALKKVHDSGIKIVIAT--GRAASDL-HEIDAVPYD-----GVIALN-------   75 (268)
T ss_dssp             CCCEEEECSBTTTBCTTTCSCCHHHHHHHHHHHHTTCEEEEEC--SSCTTCC-GGGTTSCCC-----EEEEGG-------
T ss_pred             ceEEEEEeCCCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEEc--CCChHHh-HHHHhcCCC-----cEEEeC-------
Confidence            589999999999998 44 455778999999999999999999  7665444 445555542     123322       


Q ss_pred             HhcCchhhhhcCCeE-EEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCC
Q 021350          107 LRRDDAWFAALGRSC-IHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKK  185 (313)
Q Consensus       107 ~~~~~~~~~~~g~~~-~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g  185 (313)
                                 |..+ +.                       ..+.+..             ..++.+.+.++++.+.+.+
T Consensus        76 -----------Ga~i~~~-----------------------~~~~~~~-------------~~l~~~~~~~i~~~~~~~~  108 (268)
T 3r4c_A           76 -----------GAECVLR-----------------------DGSVIRK-------------VAIPAQDFRKSMELAREFD  108 (268)
T ss_dssp             -----------GTEEEET-----------------------TSCEEEE-------------CCCCHHHHHHHHHHHHHTT
T ss_pred             -----------CcEEEEc-----------------------CCeEEEE-------------ecCCHHHHHHHHHHHHHcC
Confidence                       2322 10                       0011111             3345667777777776666


Q ss_pred             CcE-EEEcCCccccccch--------h-----------------------ccCCc-hHHHHHHHhc-----------Cce
Q 021350          186 IPM-VVANPDYVTVEARA--------L-----------------------RVMPG-TLASKFEKLG-----------GEV  221 (313)
Q Consensus       186 ~~~-i~tn~d~~~~~~~~--------~-----------------------~~~~g-~~~~~~~~~~-----------~~~  221 (313)
                      ..+ +.++..........        .                       ..... ..........           .+.
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei  188 (268)
T 3r4c_A          109 FAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQLCFYFDEEAEQKVMPLLSGLSATRWHPLFADV  188 (268)
T ss_dssp             CEEEEEETTEEEESCCCHHHHHHHHHHTCCCCCBCCHHHHHHHSCCCCEEEECCHHHHHHHGGGCTTEEEEEEETTEEEE
T ss_pred             cEEEEEECCEEEEeCCcHHHHHHHHHcCCCCCcccchHHHhccCceEEEEEecChHHHHHHHHhCCCcEEEEecCCeEEE
Confidence            665 33322111100000        0                       00000 0000111000           012


Q ss_pred             eecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCC
Q 021350          222 RWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGI  265 (313)
Q Consensus       222 ~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~  265 (313)
                      ...+.++...++.+++++|++++++++|||+. ||++|++.+|+
T Consensus       189 ~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~-NDi~m~~~ag~  231 (268)
T 3r4c_A          189 NVAGTSKATGLSLFADYYRVKVSEIMACGDGG-NDIPMLKAAGI  231 (268)
T ss_dssp             EETTCCHHHHHHHHHHHTTCCGGGEEEEECSG-GGHHHHHHSSE
T ss_pred             eeCCCCHHHHHHHHHHHcCCCHHHEEEECCcH-HhHHHHHhCCC
Confidence            33455666799999999999999999999996 99999999993

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.64  E-value=1.8e-17  Score=140.74  Aligned_cols=100  Identities=16%  Similarity=0.214  Sum_probs=73.9

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCC------chHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCC
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMP------GTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVD  242 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~------g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~  242 (313)
                      ++++.++++.+++ |+++ ++||.........   +..      ..+...++. ........+||+|..|..+++++|++
T Consensus        91 ~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~---~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~  166 (211)
T 2i6x_A           91 SAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLA---MSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMK  166 (211)
T ss_dssp             CHHHHHHHHHHTT-TSEEEEEECCCHHHHHHH---TSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHCCC
T ss_pred             ChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHH---HhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhCCC
Confidence            4789999999987 8888 8898654322111   110      111122222 12233457899999999999999999


Q ss_pred             CCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          243 ACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       243 ~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      |++|++|||+. +|+.+|+++|+.++++.+|..
T Consensus       167 ~~~~~~igD~~-~Di~~a~~aG~~~~~~~~~~~  198 (211)
T 2i6x_A          167 PEETLFIDDGP-ANVATAERLGFHTYCPDNGEN  198 (211)
T ss_dssp             GGGEEEECSCH-HHHHHHHHTTCEEECCCTTCC
T ss_pred             hHHeEEeCCCH-HHHHHHHHcCCEEEEECCHHH
Confidence            99999999996 999999999999999998754

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.64  E-value=1.5e-17  Score=139.45  Aligned_cols=99  Identities=15%  Similarity=0.208  Sum_probs=73.2

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++++.++++|+++ ++||....... ....++   +...+.. ........+||++..|..+++++|++|++|++
T Consensus        87 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~---~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~~  162 (207)
T 2go7_A           87 MPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLG---VESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYY  162 (207)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHT---CGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             CcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcC---chhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEEE
Confidence            478889999999999988 78876543221 110000   0011111 12233456899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGI  274 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~  274 (313)
                      |||+. +|++||+++|+.++++.+|.
T Consensus       163 iGD~~-nDi~~~~~aG~~~i~~~~~~  187 (207)
T 2go7_A          163 IGDRT-LDVEFAQNSGIQSINFLEST  187 (207)
T ss_dssp             EESSH-HHHHHHHHHTCEEEESSCCS
T ss_pred             ECCCH-HHHHHHHHCCCeEEEEecCC
Confidence            99995 99999999999999999876

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=99.63  E-value=7.6e-15  Score=131.24  Aligned_cols=59  Identities=19%  Similarity=0.235  Sum_probs=51.8

Q ss_pred             CccEEEEeccceeecCCcc-CccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350           29 RFKAWLLDQFGVLHDGKKP-YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~~-~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~   89 (313)
                      .+|+|+||+||||+++... .+.+.++|++++++|++++++|  ||+...+...++.+|++.
T Consensus         4 m~kli~~DlDGTLl~~~~~i~~~~~~aL~~l~~~Gi~vviaT--GR~~~~~~~~~~~l~l~~   63 (282)
T 1rkq_A            4 AIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTT--GRPYAGVHNYLKELHMEQ   63 (282)
T ss_dssp             CCCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEEC--SSCGGGTHHHHHHTTCCS
T ss_pred             cceEEEEeCCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEc--CCCHHHHHHHHHHhCCCC
Confidence            3899999999999997654 4678999999999999999999  888888888888888864

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=99.63  E-value=9.1e-16  Score=135.45  Aligned_cols=177  Identities=19%  Similarity=0.271  Sum_probs=108.9

Q ss_pred             cEEEEeccceeecCCcc-C-ccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHHHHHHHHh
Q 021350           31 KAWLLDQFGVLHDGKKP-Y-PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLR  108 (313)
Q Consensus        31 k~iifDlDGTL~~~~~~-~-~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l~~  108 (313)
                      |+|+||+||||+++++. + +.+.++|++++++|+.++++|  ||+ ..+...++.+|.+... +.++..+         
T Consensus         3 kli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~G~~~~iaT--GR~-~~~~~~~~~l~~~~~~-~~~i~~n---------   69 (261)
T 2rbk_A            3 KALFFDIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFIAT--GRP-KAIINNLSELQDRNLI-DGYITMN---------   69 (261)
T ss_dssp             CEEEECSBTTTBCTTTSSCCHHHHHHHHHHHHTTCEEEEEC--SSC-GGGCCSCHHHHHTTCC-CEEEEGG---------
T ss_pred             cEEEEeCCCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEEC--CCh-HHHHHHHHHhCccccc-CeEEEeC---------
Confidence            89999999999998764 4 678899999999999999999  776 5554444444410000 1122222         


Q ss_pred             cCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCcE
Q 021350          109 RDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPM  188 (313)
Q Consensus       109 ~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~  188 (313)
                               |..++.             .           +.++..            ..++.+.+.++++.+++.++.+
T Consensus        70 ---------Ga~i~~-------------~-----------~~~i~~------------~~l~~~~~~~i~~~~~~~~~~~  104 (261)
T 2rbk_A           70 ---------GAYCFV-------------G-----------EEVIYK------------SAIPQEEVKAMAAFCEKKGVPC  104 (261)
T ss_dssp             ---------GTEEEE-------------T-----------TEEEEE------------CCCCHHHHHHHHHHHHHHTCCE
T ss_pred             ---------CEEEEE-------------C-----------CEEEEe------------cCCCHHHHHHHHHHHHHcCCeE
Confidence                     232221             0           011111            3356788888888887777776


Q ss_pred             -EEEcCCcccc-----cc-ch---hc----------------------cCCc-hHHHHHHHh--------c---Cceeec
Q 021350          189 -VVANPDYVTV-----EA-RA---LR----------------------VMPG-TLASKFEKL--------G---GEVRWM  224 (313)
Q Consensus       189 -i~tn~d~~~~-----~~-~~---~~----------------------~~~g-~~~~~~~~~--------~---~~~~~~  224 (313)
                       +.++......     .. ..   ..                      .... ....+...+        +   .+....
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~  184 (261)
T 2rbk_A          105 IFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLPSIPTCEIGRWYPAFADVTAK  184 (261)
T ss_dssp             EEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECCCHHHHHHHGGGSTTCEEECSSTTCCEEEST
T ss_pred             EEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEEEEeCHHHHHHHHHhcCCeEEEEecCCeEEecCC
Confidence             3433222110     00 00   00                      0000 000100000        0   123557


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCc
Q 021350          225 GKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQ  266 (313)
Q Consensus       225 gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~  266 (313)
                      ++|++..++.+++++|+++++|++|||+. +|+.|++++|+.
T Consensus       185 ~~~K~~~~~~~~~~~~~~~~~~~~iGD~~-nD~~~~~~ag~~  225 (261)
T 2rbk_A          185 GDTKQKGIDEIIRHFGIKLEETMSFGDGG-NDISMLRHAAIG  225 (261)
T ss_dssp             TCSHHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSEE
T ss_pred             CCChHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHcCce
Confidence            88999999999999999999999999996 999999999973

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=99.62  E-value=4.3e-15  Score=132.81  Aligned_cols=63  Identities=21%  Similarity=0.186  Sum_probs=51.4

Q ss_pred             hhhhcCccEEEEeccceeecCCc--cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           24 IAETRRFKAWLLDQFGVLHDGKK--PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        24 ~~~~~~~k~iifDlDGTL~~~~~--~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      +...+++|+|+||+||||+++..  +.+.+.++|++++++|+.++++|  ||+...+...++.+|..
T Consensus        15 ~~~~~~~kli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~G~~v~iaT--GR~~~~~~~~~~~l~~~   79 (283)
T 3dao_A           15 LYFQGMIKLIATDIDGTLVKDGSLLIDPEYMSVIDRLIDKGIIFVVCS--GRQFSSEFKLFAPIKHK   79 (283)
T ss_dssp             ----CCCCEEEECCBTTTBSTTCSCCCHHHHHHHHHHHHTTCEEEEEC--SSCHHHHHHHTGGGGGG
T ss_pred             hhhccCceEEEEeCcCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEc--CCCHHHHHHHHHHcCCC
Confidence            33345799999999999998765  45778999999999999999999  88888888888777764

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=99.62  E-value=4.8e-15  Score=133.83  Aligned_cols=59  Identities=19%  Similarity=0.143  Sum_probs=48.7

Q ss_pred             cCccEEEEeccceeecCCccCc-c-HHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           28 RRFKAWLLDQFGVLHDGKKPYP-G-AISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~~~~~-~-a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      |.+|+|+||+||||+++...++ . +.++|++++++|+.++++|  +|+...+.+.+..+|++
T Consensus        35 M~iKli~fDlDGTLld~~~~i~~~~~~~al~~l~~~G~~~~iaT--GR~~~~~~~~~~~l~~~   95 (304)
T 3l7y_A           35 MSVKVIATDMDGTFLNSKGSYDHNRFQRILKQLQERDIRFVVAS--SNPYRQLREHFPDCHEQ   95 (304)
T ss_dssp             -CCSEEEECCCCCCSCTTSCCCHHHHHHHHHHHHHTTCEEEEEC--SSCHHHHHTTCTTTGGG
T ss_pred             eeeEEEEEeCCCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEEe--CCCHHHHHHHHHHhCCC
Confidence            5699999999999999887665 4 5799999999999999999  88887776666666653

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=99.61  E-value=1.7e-15  Score=135.70  Aligned_cols=189  Identities=11%  Similarity=-0.018  Sum_probs=114.6

Q ss_pred             CccEEEEeccceeecCCccCccHHHHHH--------HHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHH
Q 021350           29 RFKAWLLDQFGVLHDGKKPYPGAISTLE--------MLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~~~~~a~~~l~--------~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~  100 (313)
                      .+++|+||+||||+++. +.+....++.        .+++.|..++++|  +|+...+...+..+|++... +.++... 
T Consensus        21 ~~kliifDlDGTLlds~-i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~t--Gr~~~~~~~~~~~~g~~~~~-~~~i~~~-   95 (289)
T 3gyg_A           21 PQYIVFCDFDETYFPHT-IDEQKQQDIYELEDYLEQKSKDGELIIGWVT--GSSIESILDKMGRGKFRYFP-HFIASDL-   95 (289)
T ss_dssp             CSEEEEEETBTTTBCSS-CCHHHHHHHHHHHHHHHHHHHTTCEEEEEEC--SSCHHHHHHHHHHTTCCBCC-SEEEETT-
T ss_pred             CCeEEEEECCCCCcCCC-CCcchHHHHHHHHHHHHHHHhcCCcEEEEEc--CCCHHHHHHHHHhhccCCCC-CeEeecC-
Confidence            57899999999999987 5566677766        4567899999888  88888888999999986433 2233222 


Q ss_pred             HHHHHHHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 021350          101 LTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEI  180 (313)
Q Consensus       101 ~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  180 (313)
                                       |..+++...  ++........-...                       .....++++.++++.
T Consensus        96 -----------------g~~i~~~~~--ng~~~~~~~~~~~~-----------------------~~~~~~~~v~e~l~~  133 (289)
T 3gyg_A           96 -----------------GTEITYFSE--HNFGQQDNKWNSRI-----------------------NEGFSKEKVEKLVKQ  133 (289)
T ss_dssp             -----------------TTEEEECCS--SSTTEECHHHHHHH-----------------------HTTCCHHHHHHHHHH
T ss_pred             -----------------CceEEEEcC--CCcEeecCchhhhh-----------------------cccCCHHHHHHHHHH
Confidence                             333332210  00000000000000                       011456778888877


Q ss_pred             HHhC-CCcE-EEEcCCccc-cccchhcc--------CCchHHHHHHHhc--------------------CceeecCCCCH
Q 021350          181 CASK-KIPM-VVANPDYVT-VEARALRV--------MPGTLASKFEKLG--------------------GEVRWMGKPDK  229 (313)
Q Consensus       181 l~~~-g~~~-i~tn~d~~~-~~~~~~~~--------~~g~~~~~~~~~~--------------------~~~~~~gKP~~  229 (313)
                      ++++ |+.+ +.|+..... ........        ....+...+...+                    .+....+||++
T Consensus       134 l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~  213 (289)
T 3gyg_A          134 LHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTGKN  213 (289)
T ss_dssp             HHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEEEEEEEESCCSHH
T ss_pred             HHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCceEEEEEeCCCCHH
Confidence            7666 7765 444431110 00000000        0001122222222                    12244678999


Q ss_pred             HHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCC
Q 021350          230 IIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGI  265 (313)
Q Consensus       230 ~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~  265 (313)
                      ..++.+++++|+++++|++|||+. +|+.+++++|+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~GDs~-~D~~~~~~ag~  248 (289)
T 3gyg_A          214 EIVTFMLEKYNLNTERAIAFGDSG-NDVRMLQTVGN  248 (289)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEECSG-GGHHHHTTSSE
T ss_pred             HHHHHHHHHcCCChhhEEEEcCCH-HHHHHHHhCCc
Confidence            999999999999999999999996 99999999993

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.61  E-value=1.6e-15  Score=124.17  Aligned_cols=43  Identities=16%  Similarity=0.177  Sum_probs=38.8

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVF  269 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~  269 (313)
                      ||+|..|+.++++++++|++|+||||+. +|+.+|+++|+.+++
T Consensus        83 kp~~~~~~~~~~~~~~~~~~~~~vGD~~-~Di~~a~~ag~~~~~  125 (162)
T 2p9j_A           83 YKKLEIYEKIKEKYSLKDEEIGFIGDDV-VDIEVMKKVGFPVAV  125 (162)
T ss_dssp             --CHHHHHHHHHHTTCCGGGEEEEECSG-GGHHHHHHSSEEEEC
T ss_pred             CCCHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHCCCeEEe
Confidence            9999999999999999999999999997 999999999998663

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.61  E-value=9.3e-16  Score=131.28  Aligned_cols=53  Identities=34%  Similarity=0.460  Sum_probs=49.5

Q ss_pred             eecC--CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          222 RWMG--KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       222 ~~~g--KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      ...+  ||++..|+.+++++|++|++|++|||+. +|++||+++|+.++++..+..
T Consensus       137 ~~~~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~-~Di~~a~~aG~~~i~~~~~~~  191 (229)
T 2fdr_A          137 LGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSV-HGIHGARAAGMRVIGFTGASH  191 (229)
T ss_dssp             HCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSH-HHHHHHHHTTCEEEEECCSTT
T ss_pred             cccCCCCcCHHHHHHHHHHcCCChhHeEEEcCCH-HHHHHHHHCCCEEEEEecCCc
Confidence            3567  9999999999999999999999999996 999999999999999999765

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=99.60  E-value=2.8e-14  Score=127.78  Aligned_cols=57  Identities=21%  Similarity=0.268  Sum_probs=49.9

Q ss_pred             ccEEEEeccceeecCCccC-ccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           30 FKAWLLDQFGVLHDGKKPY-PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        30 ~k~iifDlDGTL~~~~~~~-~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      +|+|+||+||||++++..+ +.+.++++++++.|++++++|  ||+...+...++.+|++
T Consensus         4 ikli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaT--GR~~~~~~~~~~~l~~~   61 (288)
T 1nrw_A            4 MKLIAIDLDGTLLNSKHQVSLENENALRQAQRDGIEVVVST--GRAHFDVMSIFEPLGIK   61 (288)
T ss_dssp             CCEEEEECCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEEC--SSCHHHHHHHHGGGTCC
T ss_pred             eEEEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCEEEEEe--CCCHHHHHHHHHHcCCC
Confidence            7999999999999987655 578899999999999999999  88888888888888775

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.60  E-value=1.4e-15  Score=126.74  Aligned_cols=99  Identities=14%  Similarity=0.213  Sum_probs=71.1

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.++++.++++|+++ ++||...... .....++   +...++. ........+||+|..|+.+++++|++  +|+
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~-~~l~~~~---~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~  156 (190)
T 2fi1_A           83 LFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTS---IAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGL  156 (190)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTT---CGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEE
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEECCcHHHH-HHHHHcC---CHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEE
Confidence            4578899999999999988 7887543111 0000000   0111111 12234557899999999999999998  999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      +|||+. +|+++|+++|+.++++.+|..
T Consensus       157 ~iGD~~-~Di~~a~~aG~~~~~~~~~~~  183 (190)
T 2fi1_A          157 VIGDRP-IDIEAGQAAGLDTHLFTSIVN  183 (190)
T ss_dssp             EEESSH-HHHHHHHHTTCEEEECSCHHH
T ss_pred             EEcCCH-HHHHHHHHcCCeEEEECCCCC
Confidence            999996 999999999999999988643

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=99.59  E-value=2e-14  Score=127.68  Aligned_cols=59  Identities=22%  Similarity=0.238  Sum_probs=48.2

Q ss_pred             cCccEEEEeccceeecCCccCc-cH-HHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           28 RRFKAWLLDQFGVLHDGKKPYP-GA-ISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~~~~~-~a-~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      |++|+|+||+||||+++...++ .+ .++|++++++|++++++|  ||+...+.+.+++++..
T Consensus         1 m~~kli~~DlDGTLl~~~~~i~~~~~~~al~~l~~~G~~~~iaT--GR~~~~~~~~~~~l~~~   61 (271)
T 1rlm_A            1 MAVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVAS--GNQYYQLISFFPELKDE   61 (271)
T ss_dssp             -CCCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHHHTCEEEEEC--SSCHHHHGGGCTTTTTT
T ss_pred             CCccEEEEeCCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEEe--CCcHHHHHHHHHhcCCC
Confidence            4689999999999999876554 54 799999999999999999  88887776666666543

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=99.58  E-value=4e-15  Score=133.06  Aligned_cols=59  Identities=22%  Similarity=0.228  Sum_probs=51.1

Q ss_pred             cCccEEEEeccceeecCCccC-ccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           28 RRFKAWLLDQFGVLHDGKKPY-PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~~~~-~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      |++|+|+||+||||+++...+ +.+.++|++++++|+.++++|  ||+...+.+.++.+|++
T Consensus        19 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~v~iaT--GR~~~~~~~~~~~l~~~   78 (285)
T 3pgv_A           19 GMYQVVASDLDGTLLSPDHFLTPYAKETLKLLTARGINFVFAT--GRHYIDVGQIRDNLGIR   78 (285)
T ss_dssp             --CCEEEEECCCCCSCTTSCCCHHHHHHHHHHHTTTCEEEEEC--SSCGGGGHHHHHHHCSC
T ss_pred             CcceEEEEeCcCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEc--CCCHHHHHHHHHhcCCC
Confidence            479999999999999987655 578899999999999999999  88888888888888886

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.58  E-value=1.6e-15  Score=145.74  Aligned_cols=53  Identities=21%  Similarity=0.303  Sum_probs=48.5

Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350          224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHAT  277 (313)
Q Consensus       224 ~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~  277 (313)
                      .+||+|++|+.+++++|++|++|+||||+. +|+++|+++|+.++++.++....
T Consensus       158 ~~KP~p~~~~~~~~~lg~~p~~~~~v~D~~-~di~~a~~aG~~~~~~~~~~~~~  210 (555)
T 3i28_A          158 MVKPEPQIYKFLLDTLKASPSEVVFLDDIG-ANLKPARDLGMVTILVQDTDTAL  210 (555)
T ss_dssp             CCTTCHHHHHHHHHHHTCCGGGEEEEESCH-HHHHHHHHHTCEEEECSSHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCChhHEEEECCcH-HHHHHHHHcCCEEEEECCCccHH
Confidence            459999999999999999999999999996 99999999999999998865433

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.58  E-value=1.3e-15  Score=124.94  Aligned_cols=43  Identities=21%  Similarity=0.210  Sum_probs=40.3

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVF  269 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~  269 (313)
                      ||+|..++.++++++++|++|+||||+. +|+.+|+++|+.++.
T Consensus        78 kpk~~~~~~~~~~~~~~~~~~~~vGD~~-~Di~~~~~ag~~~~~  120 (164)
T 3e8m_A           78 VDKLSAAEELCNELGINLEQVAYIGDDL-NDAKLLKRVGIAGVP  120 (164)
T ss_dssp             SCHHHHHHHHHHHHTCCGGGEEEECCSG-GGHHHHTTSSEEECC
T ss_pred             CChHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHCCCeEEc
Confidence            9999999999999999999999999997 999999999986554

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=99.57  E-value=3.6e-14  Score=128.18  Aligned_cols=68  Identities=13%  Similarity=0.152  Sum_probs=56.4

Q ss_pred             cchHHhhhhcCccEEEEeccceeecC-Cc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHH--HhCC-CC
Q 021350           19 NGLRHIAETRRFKAWLLDQFGVLHDG-KK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKL--KSLG-FD   88 (313)
Q Consensus        19 ~~~~~~~~~~~~k~iifDlDGTL~~~-~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l--~~~G-~~   88 (313)
                      .++..-+.||.+|+|+||+||||+++ .. +.+.+.++|++|+++|++++++|  ||+...+...+  +.+| +.
T Consensus        16 ~~~~~~~~~M~ikli~~DlDGTLl~~~~~~is~~~~~al~~l~~~Gi~v~iaT--GR~~~~~~~~~~~~~l~~~~   88 (301)
T 2b30_A           16 LKVEEALKGADIKLLLIDFDGTLFVDKDIKVPSENIDAIKEAIEKGYMVSICT--GRSKVGILSAFGEENLKKMN   88 (301)
T ss_dssp             -CHHHHTTTCCCCEEEEETBTTTBCCTTTCSCHHHHHHHHHHHHHTCEEEEEC--SSCHHHHHHHHCHHHHHHHT
T ss_pred             eehhhccccccccEEEEECCCCCcCCCCCccCHHHHHHHHHHHHCCCEEEEEc--CCCHHHHHHHhhHHhhcccc
Confidence            45666667778999999999999997 54 55679999999999999999999  88888777777  7777 64

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=99.57  E-value=5.5e-15  Score=139.48  Aligned_cols=50  Identities=20%  Similarity=0.086  Sum_probs=44.6

Q ss_pred             cCCCCHHHHHHHHHHhC----CCCCcEEEEcCCc----------------hhhHHHHHHcCCcEEEEcCC
Q 021350          224 MGKPDKIIYKSAMAMVG----VDACDSIAVGDSL----------------HHDIKGANAAGIQSVFIIGG  273 (313)
Q Consensus       224 ~gKP~~~~~~~~~~~lg----v~~~~~v~IGDs~----------------~~Di~~a~~aG~~~i~V~~G  273 (313)
                      .+||+|.+|+.+++++|    ++|++|+||||+.                .+|+.+|+++|+.++..-..
T Consensus       151 ~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~pe~~  220 (416)
T 3zvl_A          151 NRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATPEEF  220 (416)
T ss_dssp             TSTTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECHHHH
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCcHHh
Confidence            45999999999999997    9999999999996                48999999999998765443

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.57  E-value=6.8e-16  Score=131.34  Aligned_cols=86  Identities=10%  Similarity=0.130  Sum_probs=66.5

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCc--------------------eeecCCCCH
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGE--------------------VRWMGKPDK  229 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~--------------------~~~~gKP~~  229 (313)
                      ++++.++++.++++|+++ ++||......            ...++.++..                    ....+||+|
T Consensus        77 ~~~~~~~l~~l~~~g~~~~i~S~~~~~~~------------~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~  144 (217)
T 3m1y_A           77 FEGALELVSALKEKNYKVVCFSGGFDLAT------------NHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKG  144 (217)
T ss_dssp             CBTHHHHHHHHHTTTEEEEEEEEEEHHHH------------HHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHH
T ss_pred             CCCHHHHHHHHHHCCCEEEEEcCCchhHH------------HHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCCChH
Confidence            467889999999999988 7888543211            1222333221                    122589999


Q ss_pred             HHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 021350          230 IIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVF  269 (313)
Q Consensus       230 ~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~  269 (313)
                      ..|+.+++++|++|++|++|||+. +|+.+|+++|+.+++
T Consensus       145 ~~~~~~~~~~g~~~~~~i~vGDs~-~Di~~a~~aG~~~~~  183 (217)
T 3m1y_A          145 EMLLVLQRLLNISKTNTLVVGDGA-NDLSMFKHAHIKIAF  183 (217)
T ss_dssp             HHHHHHHHHHTCCSTTEEEEECSG-GGHHHHTTCSEEEEE
T ss_pred             HHHHHHHHHcCCCHhHEEEEeCCH-HHHHHHHHCCCeEEE
Confidence            999999999999999999999996 999999999998765

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.56  E-value=1.6e-16  Score=136.44  Aligned_cols=95  Identities=23%  Similarity=0.196  Sum_probs=62.9

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.+.++.++++|+++ ++||....  ....  +..-.+...++. .+......+||+|..|+.+++++|++|   +|
T Consensus        97 ~~~~~~~l~~l~~~g~~~~i~Tn~~~~--~~~~--l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~---~~  169 (220)
T 2zg6_A           97 YDDTLEFLEGLKSNGYKLALVSNASPR--VKTL--LEKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPA---VH  169 (220)
T ss_dssp             CTTHHHHHHHHHTTTCEEEECCSCHHH--HHHH--HHHHTCGGGCSEEC-----------CCHHHHHHHHHCSSE---EE
T ss_pred             CcCHHHHHHHHHHCCCEEEEEeCCcHH--HHHH--HHhcCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCCe---EE
Confidence            478899999999999998 78886431  1111  000011112222 233445678999999999999999998   99


Q ss_pred             EcCCchh-hHHHHHHcCCcEEEEcCC
Q 021350          249 VGDSLHH-DIKGANAAGIQSVFIIGG  273 (313)
Q Consensus       249 IGDs~~~-Di~~a~~aG~~~i~V~~G  273 (313)
                      |||+. + |+.+|+++|+.+++|.++
T Consensus       170 vgD~~-~~Di~~a~~aG~~~i~v~~~  194 (220)
T 2zg6_A          170 VGDIY-ELDYIGAKRSYVDPILLDRY  194 (220)
T ss_dssp             EESSC-CCCCCCSSSCSEEEEEBCTT
T ss_pred             EcCCc-hHhHHHHHHCCCeEEEECCC
Confidence            99997 6 999999999999999886

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=99.56  E-value=7.1e-15  Score=122.74  Aligned_cols=43  Identities=21%  Similarity=0.212  Sum_probs=40.2

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVF  269 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~  269 (313)
                      ||++..++.+++++|++|++|+||||+. +|+.+++++|+.++.
T Consensus        82 k~k~~~~~~~~~~~~~~~~~~~~vGD~~-~Di~~~~~ag~~~~~  124 (180)
T 1k1e_A           82 LEKETACFDLMKQAGVTAEQTAYIGDDS-VDLPAFAACGTSFAV  124 (180)
T ss_dssp             SCHHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSEEEEC
T ss_pred             CCcHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHcCCeEEe
Confidence            8889999999999999999999999997 999999999987664

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=99.55  E-value=1.5e-14  Score=124.01  Aligned_cols=49  Identities=24%  Similarity=0.289  Sum_probs=45.3

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          225 GKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       225 gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      .||+|+.|..+++++|+    |+||||+. +|+.+|+++|+.+|+|.+|.....
T Consensus       144 ~KP~p~~~~~~~~~~g~----~l~VGDs~-~Di~aA~~aG~~~i~v~~g~~~~~  192 (211)
T 2b82_A          144 DKPGQNTKSQWLQDKNI----RIFYGDSD-NDITAARDVGARGIRILRASNSTY  192 (211)
T ss_dssp             CCTTCCCSHHHHHHTTE----EEEEESSH-HHHHHHHHTTCEEEECCCCTTCSS
T ss_pred             CCCCHHHHHHHHHHCCC----EEEEECCH-HHHHHHHHCCCeEEEEecCCCCcc
Confidence            39999999999999998    99999997 999999999999999999877654

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=99.54  E-value=8.4e-15  Score=123.66  Aligned_cols=41  Identities=17%  Similarity=0.302  Sum_probs=39.3

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcE
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQS  267 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~  267 (313)
                      ||++..+..+++++++++++|+||||+. +|+.+++++|+.+
T Consensus        93 kpk~~~~~~~~~~~~~~~~~~~~vGD~~-~Di~~~~~ag~~~  133 (191)
T 3n1u_A           93 VDKRSAYQHLKKTLGLNDDEFAYIGDDL-PDLPLIQQVGLGV  133 (191)
T ss_dssp             SSCHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSEEE
T ss_pred             CChHHHHHHHHHHhCCCHHHEEEECCCH-HHHHHHHHCCCEE
Confidence            8999999999999999999999999997 9999999999876

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.54  E-value=4.2e-16  Score=132.09  Aligned_cols=94  Identities=15%  Similarity=0.070  Sum_probs=66.0

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCc------------------eeecCCCCHHH
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGE------------------VRWMGKPDKII  231 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~------------------~~~~gKP~~~~  231 (313)
                      ++++.++++.++++|+++ ++||......            ...++.++..                  .....||++..
T Consensus        84 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (219)
T 3kd3_A           84 TDGIKELVQDLKNKGFEIWIFSGGLSESI------------QPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDS  151 (219)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEEEEEHHHH------------HHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTC
T ss_pred             ChhHHHHHHHHHHCCCeEEEEcCCcHHHH------------HHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCccc
Confidence            467889999999999998 7887543211            1122222211                  02346777765


Q ss_pred             HHHHH-HHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          232 YKSAM-AMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       232 ~~~~~-~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      +..++ +.+|+++++|+||||+. +|+.|+ ++|+.+++|..|.....
T Consensus       152 ~~~~l~~~~~~~~~~~~~vGD~~-~Di~~~-~~G~~~~~v~~~~~~~~  197 (219)
T 3kd3_A          152 KLSAFDKAKGLIDGEVIAIGDGY-TDYQLY-EKGYATKFIAYMEHIER  197 (219)
T ss_dssp             HHHHHHHHGGGCCSEEEEEESSH-HHHHHH-HHTSCSEEEEECSSCCC
T ss_pred             HHHHHHHHhCCCCCCEEEEECCH-hHHHHH-hCCCCcEEEeccCcccc
Confidence            55555 55699999999999996 999999 58999999988866543

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.51  E-value=2.5e-14  Score=123.58  Aligned_cols=95  Identities=18%  Similarity=0.187  Sum_probs=66.0

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      .++++.++|+.|+++| ++ ++||..........   ..-.+..   .+.. ....++++|..++.+++  +++|++|+|
T Consensus        97 ~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l---~~~gl~~---~f~~-~~~~~~~K~~~~~~~~~--~~~~~~~~~  166 (231)
T 2p11_A           97 VYPGALNALRHLGARG-PTVILSDGDVVFQPRKI---ARSGLWD---EVEG-RVLIYIHKELMLDQVME--CYPARHYVM  166 (231)
T ss_dssp             BCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHH---HHTTHHH---HTTT-CEEEESSGGGCHHHHHH--HSCCSEEEE
T ss_pred             cCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHH---HHcCcHH---hcCe-eEEecCChHHHHHHHHh--cCCCceEEE
Confidence            3578999999999999 77 89987653322111   0011112   2211 11123444567777776  799999999


Q ss_pred             EcCCchh---hHHHHHHcCCcEEEEcCCCC
Q 021350          249 VGDSLHH---DIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       249 IGDs~~~---Di~~a~~aG~~~i~V~~G~~  275 (313)
                      |||+. +   |+.+|+++|+.+++|.+|..
T Consensus       167 vgDs~-~d~~di~~A~~aG~~~i~v~~g~~  195 (231)
T 2p11_A          167 VDDKL-RILAAMKKAWGARLTTVFPRQGHY  195 (231)
T ss_dssp             ECSCH-HHHHHHHHHHGGGEEEEEECCSSS
T ss_pred             EcCcc-chhhhhHHHHHcCCeEEEeCCCCC
Confidence            99997 7   99999999999999999854

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=99.51  E-value=1.6e-14  Score=122.36  Aligned_cols=42  Identities=12%  Similarity=0.131  Sum_probs=38.9

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEE
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSV  268 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i  268 (313)
                      ||++..++.+++++|+++++|+||||+. +|+.+++++|+..+
T Consensus        99 k~k~~~~~~~~~~~~~~~~~~~~vGD~~-nDi~~~~~ag~~va  140 (195)
T 3n07_A           99 DDKVQAYYDICQKLAIAPEQTGYIGDDL-IDWPVMEKVALRVC  140 (195)
T ss_dssp             SSHHHHHHHHHHHHCCCGGGEEEEESSG-GGHHHHTTSSEEEE
T ss_pred             CCcHHHHHHHHHHhCCCHHHEEEEcCCH-HHHHHHHHCCCEEE
Confidence            7888899999999999999999999996 99999999996543

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=99.50  E-value=2.8e-14  Score=119.99  Aligned_cols=43  Identities=16%  Similarity=0.250  Sum_probs=40.5

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVF  269 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~  269 (313)
                      ||++..++.+++++|+++++|+||||+. +|+.+|+++|+.++.
T Consensus       100 kpk~~~~~~~~~~~g~~~~~~~~iGD~~-~Di~~a~~ag~~~~~  142 (188)
T 2r8e_A          100 SNKLIAFSDLLEKLAIAPENVAYVGDDL-IDWPVMEKVGLSVAV  142 (188)
T ss_dssp             SCSHHHHHHHHHHHTCCGGGEEEEESSG-GGHHHHTTSSEEEEC
T ss_pred             CCCHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHCCCEEEe
Confidence            8999999999999999999999999997 999999999987754

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=99.48  E-value=3.8e-14  Score=119.33  Aligned_cols=42  Identities=14%  Similarity=0.226  Sum_probs=37.1

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEE
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSV  268 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i  268 (313)
                      +++|..++.+++++|+++++|+||||+. +|+.+++++|+..+
T Consensus        93 ~~K~~~~~~~~~~~g~~~~~~~~vGD~~-nDi~~~~~ag~~~~  134 (189)
T 3mn1_A           93 EDKLVVLDKLLAELQLGYEQVAYLGDDL-PDLPVIRRVGLGMA  134 (189)
T ss_dssp             SCHHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSEEEE
T ss_pred             CChHHHHHHHHHHcCCChhHEEEECCCH-HHHHHHHHCCCeEE
Confidence            3445799999999999999999999996 99999999997543

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=99.47  E-value=4.9e-14  Score=117.32  Aligned_cols=41  Identities=15%  Similarity=0.201  Sum_probs=38.5

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcE
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQS  267 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~  267 (313)
                      ||++..++.+++++|+++++|+||||+. +|+.+++++|+..
T Consensus        85 ~~k~~~l~~~~~~~~~~~~~~~~vGD~~-nD~~~~~~ag~~v  125 (176)
T 3mmz_A           85 DRKDLALKQWCEEQGIAPERVLYVGNDV-NDLPCFALVGWPV  125 (176)
T ss_dssp             SCHHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSEEE
T ss_pred             CChHHHHHHHHHHcCCCHHHEEEEcCCH-HHHHHHHHCCCeE
Confidence            8999999999999999999999999996 9999999999653

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=99.46  E-value=2.6e-13  Score=117.53  Aligned_cols=59  Identities=17%  Similarity=0.179  Sum_probs=50.9

Q ss_pred             cCccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      |.+|+|+||+||||++... +.+.+.++|++|+++|++++++|  +|+...+...++.+|++
T Consensus         3 mm~kli~~DlDGTLl~~~~~i~~~~~~~l~~l~~~g~~~~i~T--Gr~~~~~~~~~~~l~~~   62 (227)
T 1l6r_A            3 HMIRLAAIDVDGNLTDRDRLISTKAIESIRSAEKKGLTVSLLS--GNVIPVVYALKIFLGIN   62 (227)
T ss_dssp             CCCCEEEEEHHHHSBCTTSCBCHHHHHHHHHHHHTTCEEEEEC--SSCHHHHHHHHHHHTCC
T ss_pred             cceEEEEEECCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEC--CCCcHHHHHHHHHhCCC
Confidence            3489999999999998665 45678999999999999999999  88888888888888875

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=99.46  E-value=8.1e-13  Score=117.07  Aligned_cols=56  Identities=16%  Similarity=0.166  Sum_probs=49.0

Q ss_pred             ccEEEEeccceeecCCccC-ccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           30 FKAWLLDQFGVLHDGKKPY-PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        30 ~k~iifDlDGTL~~~~~~~-~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      +|+|+||+||||+++...+ +.+.++|++ +++|++++++|  ||+...+...++.+|++
T Consensus         2 ikli~~DlDGTLl~~~~~i~~~~~~al~~-~~~Gi~v~iaT--GR~~~~~~~~~~~l~~~   58 (268)
T 1nf2_A            2 YRVFVFDLDGTLLNDNLEISEKDRRNIEK-LSRKCYVVFAS--GRMLVSTLNVEKKYFKR   58 (268)
T ss_dssp             BCEEEEECCCCCSCTTSCCCHHHHHHHHH-HTTTSEEEEEC--SSCHHHHHHHHHHHSSS
T ss_pred             ccEEEEeCCCcCCCCCCccCHHHHHHHHH-HhCCCEEEEEC--CCChHHHHHHHHHhCCC
Confidence            6899999999999976554 678899999 99999999999  98888888888888875

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.44  E-value=3.6e-13  Score=115.88  Aligned_cols=86  Identities=12%  Similarity=0.022  Sum_probs=65.0

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCc--------------------eeecCCCCH
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGE--------------------VRWMGKPDK  229 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~--------------------~~~~gKP~~  229 (313)
                      ++++.+.++.++++|+++ ++||.......            ..++.++..                    +...+++++
T Consensus        94 ~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~------------~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~  161 (232)
T 3fvv_A           94 TVQAVDVVRGHLAAGDLCALVTATNSFVTA------------PIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKV  161 (232)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEESSCHHHHH------------HHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHH
T ss_pred             CHHHHHHHHHHHHCCCEEEEEeCCCHHHHH------------HHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHH
Confidence            589999999999999998 88886542221            112222211                    223456777


Q ss_pred             HHHHHHHHHhC---CCCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 021350          230 IIYKSAMAMVG---VDACDSIAVGDSLHHDIKGANAAGIQSVF  269 (313)
Q Consensus       230 ~~~~~~~~~lg---v~~~~~v~IGDs~~~Di~~a~~aG~~~i~  269 (313)
                      ..++.+++++|   ++|++|+||||+. +|+.+++++|+..+.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~vGDs~-~D~~~~~~ag~~~~~  203 (232)
T 3fvv_A          162 VRVNQWLAGMGLALGDFAESYFYSDSV-NDVPLLEAVTRPIAA  203 (232)
T ss_dssp             HHHHHHHHHTTCCGGGSSEEEEEECCG-GGHHHHHHSSEEEEE
T ss_pred             HHHHHHHHHcCCCcCchhheEEEeCCH-hhHHHHHhCCCeEEE
Confidence            88999999999   9999999999996 999999999977654

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=99.43  E-value=1.1e-13  Score=118.78  Aligned_cols=42  Identities=17%  Similarity=0.250  Sum_probs=38.7

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEE
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSV  268 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i  268 (313)
                      ||++..++.+++++|+++++|+||||+. +|+.+++++|+.++
T Consensus       123 k~K~~~l~~~~~~lg~~~~~~~~vGDs~-nDi~~~~~ag~~~a  164 (211)
T 3ij5_A          123 SDKLVAYHELLATLQCQPEQVAYIGDDL-IDWPVMAQVGLSVA  164 (211)
T ss_dssp             SSHHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHTTSSEEEE
T ss_pred             CChHHHHHHHHHHcCcCcceEEEEcCCH-HHHHHHHHCCCEEE
Confidence            7778899999999999999999999996 99999999997644

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.43  E-value=2.9e-13  Score=115.98  Aligned_cols=86  Identities=12%  Similarity=0.067  Sum_probs=62.9

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCce------------------e------ecC
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEV------------------R------WMG  225 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~------------------~------~~g  225 (313)
                      ++++.++++.|+++|+++ ++||......            ...++.++...                  .      ..+
T Consensus        88 ~~g~~~~l~~L~~~g~~~~i~T~~~~~~~------------~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~  155 (225)
T 1nnl_A           88 TPGIRELVSRLQERNVQVFLISGGFRSIV------------EHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAES  155 (225)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEEEEEHHHH------------HHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGST
T ss_pred             CccHHHHHHHHHHCCCcEEEEeCChHHHH------------HHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCC
Confidence            478999999999999998 8888544221            11222222110                  0      013


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIG  272 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~  272 (313)
                      ||+|..|+.+++++|+  ++|+||||+. +|+.+|+++|+ +|++..
T Consensus       156 ~~Kp~~~~~~~~~~~~--~~~~~vGDs~-~Di~~a~~ag~-~i~~~~  198 (225)
T 1nnl_A          156 GGKGKVIKLLKEKFHF--KKIIMIGDGA-TDMEACPPADA-FIGFGG  198 (225)
T ss_dssp             THHHHHHHHHHHHHCC--SCEEEEESSH-HHHTTTTTSSE-EEEECS
T ss_pred             CchHHHHHHHHHHcCC--CcEEEEeCcH-HhHHHHHhCCe-EEEecC
Confidence            5777899999999998  8999999997 99999999999 887744

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=99.43  E-value=4.5e-13  Score=117.98  Aligned_cols=187  Identities=17%  Similarity=0.156  Sum_probs=108.2

Q ss_pred             EEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHHHHHHHHhcCc
Q 021350           32 AWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDD  111 (313)
Q Consensus        32 ~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l~~~~~  111 (313)
                      +|+||+||||+++..+.+.+.++|++++++|++++++|  +|+...+.    .+|+..    .++..+            
T Consensus         2 li~~DlDGTLl~~~~i~~~~~~al~~l~~~Gi~v~iaT--GR~~~~~~----~l~~~~----~~i~~n------------   59 (259)
T 3zx4_A            2 IVFTDLDGTLLDERGELGPAREALERLRALGVPVVPVT--AKTRKEVE----ALGLEP----PFIVEN------------   59 (259)
T ss_dssp             EEEECCCCCCSCSSSSCSTTHHHHHHHHHTTCCEEEBC--SSCHHHHH----HTTCCS----SEEEGG------------
T ss_pred             EEEEeCCCCCcCCCcCCHHHHHHHHHHHHCCCeEEEEe--CCCHHHHH----HcCCCC----cEEEEC------------
Confidence            68999999999988556788999999999999999998  88776665    566642    223333            


Q ss_pred             hhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHh-CCCcE-E
Q 021350          112 AWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICAS-KKIPM-V  189 (313)
Q Consensus       112 ~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~~-i  189 (313)
                            |..++.....      ..+...      .....++.            ...++++.+.++++.+++ .+..+ .
T Consensus        60 ------Ga~i~~~~~~------~~~~~~------~~~~~~~~------------~~~~~~~~~~~~l~~~~~~~~~~~~~  109 (259)
T 3zx4_A           60 ------GGGLYLPRDW------PVRAGR------PKGGYRVV------------SLAWPYRKVRARLREAEALAGRPILG  109 (259)
T ss_dssp             ------GTEEEEETTC------SSCCSE------EETTEEEE------------ECSCCHHHHHHHHHHHHHHHTSCCCB
T ss_pred             ------CcEEEeCCCC------cccccc------cCCceEEE------------EcCCCHHHHHHHHHHHHHhcCceEEE
Confidence                  4433321100      000000      00001111            134567778888877764 45444 2


Q ss_pred             EEcCCccc----------------c--ccchhccCC---chHHHHHHHhcC---------ceeecCCCCHHHHHHHHHHh
Q 021350          190 VANPDYVT----------------V--EARALRVMP---GTLASKFEKLGG---------EVRWMGKPDKIIYKSAMAMV  239 (313)
Q Consensus       190 ~tn~d~~~----------------~--~~~~~~~~~---g~~~~~~~~~~~---------~~~~~gKP~~~~~~~~~~~l  239 (313)
                      .++.....                .  ......+..   ..+...+...+.         +.... ++++..++.+++++
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~ei~~~-~~K~~~l~~l~~~~  188 (259)
T 3zx4_A          110 YGDLTAEAVARLTGLSREAARRAKAREYDETLVLCPEEVEAVLEALEAVGLEWTHGGRFYHAAKG-ADKGRAVARLRALW  188 (259)
T ss_dssp             GGGBCHHHHHHHHCCCHHHHHHHTCCSSCEEBCCCTTTHHHHHHHHHHTTCEEEECSSSEEEESS-CCHHHHHHHHHHTC
T ss_pred             cCCCCHHHHHHHcCCCHHHhhhhhccccceeEEeCcHHHHHHHHHHHHCCcEEEecCceEEEcCC-CCHHHHHHHHHHHh
Confidence            22211000                0  000000000   112222221111         11223 56688999999999


Q ss_pred             CCCC--CcEEEEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350          240 GVDA--CDSIAVGDSLHHDIKGANAAGIQSVFIIGG  273 (313)
Q Consensus       240 gv~~--~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G  273 (313)
                      |+++  +++++|||+. ||+.|++.+|+ ++.+..+
T Consensus       189 ~i~~~~~~~~~~GD~~-nD~~m~~~ag~-~va~~na  222 (259)
T 3zx4_A          189 PDPEEARFAVGLGDSL-NDLPLFRAVDL-AVYVGRG  222 (259)
T ss_dssp             SSHHHHTSEEEEESSG-GGHHHHHTSSE-EEECSSS
T ss_pred             CCCCCCceEEEEeCCH-HHHHHHHhCCC-eEEeCCh
Confidence            9999  9999999996 99999999995 4555443

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=99.42  E-value=1.7e-12  Score=115.48  Aligned_cols=59  Identities=20%  Similarity=0.219  Sum_probs=52.4

Q ss_pred             cCccEEEEeccceeecCC-ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           28 RRFKAWLLDQFGVLHDGK-KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~-~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      |++++|+||+||||+++. ...+.+.++|++|+++|++++++|  ||+...+...++.+|++
T Consensus         7 m~~~li~~DlDGTLl~~~~~~~~~~~~~l~~l~~~G~~~~iaT--GR~~~~~~~~~~~l~~~   66 (275)
T 1xvi_A            7 QQPLLVFSDLDGTLLDSHSYDWQPAAPWLTRLREANVPVILCS--SKTSAEMLYLQKTLGLQ   66 (275)
T ss_dssp             CCCEEEEEECTTTTSCSSCCSCCTTHHHHHHHHHTTCCEEEEC--SSCHHHHHHHHHHTTCT
T ss_pred             cCceEEEEeCCCCCCCCCCcCCHHHHHHHHHHHHCCCeEEEEc--CCCHHHHHHHHHHcCCC
Confidence            578999999999999964 456889999999999999999999  88888888888888885

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=99.41  E-value=7e-13  Score=109.58  Aligned_cols=44  Identities=9%  Similarity=0.059  Sum_probs=38.5

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEc
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFII  271 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~  271 (313)
                      |+++..++.+++++|++|++|+||||+. +|+.+++++|+.+ .+.
T Consensus        82 ~~K~~~l~~~~~~~gi~~~~~~~vGD~~-nDi~~~~~ag~~~-a~~  125 (168)
T 3ewi_A           82 SDKLATVDEWRKEMGLCWKEVAYLGNEV-SDEECLKRVGLSA-VPA  125 (168)
T ss_dssp             SCHHHHHHHHHHHTTCCGGGEEEECCSG-GGHHHHHHSSEEE-ECT
T ss_pred             CChHHHHHHHHHHcCcChHHEEEEeCCH-hHHHHHHHCCCEE-EeC
Confidence            4556799999999999999999999996 9999999999764 443

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.39  E-value=3.7e-14  Score=119.56  Aligned_cols=83  Identities=23%  Similarity=0.278  Sum_probs=60.0

Q ss_pred             HHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCce--------------------eecCCCCHH
Q 021350          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEV--------------------RWMGKPDKI  230 (313)
Q Consensus       172 ~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~--------------------~~~gKP~~~  230 (313)
                      +++.++++.++++|+++ ++|+.......            ..++.++...                    ...+++++.
T Consensus        79 ~~~~~~l~~l~~~g~~~~i~T~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~  146 (211)
T 1l7m_A           79 EGAEETIKELKNRGYVVAVVSGGFDIAVN------------KIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGE  146 (211)
T ss_dssp             TTHHHHHHHHHHTTEEEEEEEEEEHHHHH------------HHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHH
T ss_pred             ccHHHHHHHHHHCCCEEEEEcCCcHHHHH------------HHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHH
Confidence            57889999999999988 77764432111            0111111110                    012456678


Q ss_pred             HHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcE
Q 021350          231 IYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQS  267 (313)
Q Consensus       231 ~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~  267 (313)
                      .+..+++++|+++++|++|||+. +|+.||+++|+..
T Consensus       147 ~l~~~~~~lgi~~~~~~~iGD~~-~Di~~~~~ag~~~  182 (211)
T 1l7m_A          147 ILEKIAKIEGINLEDTVAVGDGA-NDISMFKKAGLKI  182 (211)
T ss_dssp             HHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHCSEEE
T ss_pred             HHHHHHHHcCCCHHHEEEEecCh-hHHHHHHHCCCEE
Confidence            99999999999999999999996 9999999999853

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.38  E-value=2.7e-12  Score=116.70  Aligned_cols=86  Identities=15%  Similarity=0.114  Sum_probs=66.5

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCc--------------------eeecCCCCH
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGE--------------------VRWMGKPDK  229 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~--------------------~~~~gKP~~  229 (313)
                      ++++.+.++.++++|+++ ++||......            ...++.++..                    ....+||+|
T Consensus       181 ~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~------------~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp  248 (317)
T 4eze_A          181 SPGLLTILPVIKAKGFKTAIISGGLDIFT------------QRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKK  248 (317)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEEEEEHHHH------------HHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHH
T ss_pred             CcCHHHHHHHHHhCCCEEEEEeCccHHHH------------HHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCH
Confidence            478899999999999998 8888543211            1222222221                    122459999


Q ss_pred             HHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 021350          230 IIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVF  269 (313)
Q Consensus       230 ~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~  269 (313)
                      ..|..+++++|++|++|+||||+. +|+.+|+++|+.+++
T Consensus       249 ~~~~~~~~~lgv~~~~~i~VGDs~-~Di~aa~~AG~~va~  287 (317)
T 4eze_A          249 QTLVDLAARLNIATENIIACGDGA-NDLPMLEHAGTGIAW  287 (317)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSEEEEE
T ss_pred             HHHHHHHHHcCCCcceEEEEeCCH-HHHHHHHHCCCeEEe
Confidence            999999999999999999999996 999999999986665

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=99.36  E-value=2.5e-12  Score=119.67  Aligned_cols=104  Identities=20%  Similarity=0.269  Sum_probs=75.9

Q ss_pred             CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHH--Hh-cCcee-----------ecCCCCHHHHH
Q 021350          169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFE--KL-GGEVR-----------WMGKPDKIIYK  233 (313)
Q Consensus       169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~--~~-~~~~~-----------~~gKP~~~~~~  233 (313)
                      -.++++.++|+.|+++|+++ ++||............++   +...|+  .+ +....           ..+||+|++|.
T Consensus       215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lg---L~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~  291 (384)
T 1qyi_A          215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLG---LLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYI  291 (384)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHT---CGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHH
T ss_pred             CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcC---ChHhcCCCEEEecccccccccccccccCCCCCCHHHHH
Confidence            45799999999999999999 899976522211100011   111111  10 11111           14899999999


Q ss_pred             HHHHHhC--------------CCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCC
Q 021350          234 SAMAMVG--------------VDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHA  276 (313)
Q Consensus       234 ~~~~~lg--------------v~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~  276 (313)
                      .+++++|              ++|++|+||||+. +|+.+|+++|+.+|+|.+|...
T Consensus       292 ~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~-~Di~aAk~AG~~~I~V~~g~~~  347 (384)
T 1qyi_A          292 AALYGNNRDKYESYINKQDNIVNKDDVFIVGDSL-ADLLSAQKIGATFIGTLTGLKG  347 (384)
T ss_dssp             HHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSH-HHHHHHHHHTCEEEEESCBTTB
T ss_pred             HHHHHcCCccccccccccccCCCCcCeEEEcCCH-HHHHHHHHcCCEEEEECCCccc
Confidence            9999999              9999999999997 9999999999999999998753

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.35  E-value=1.8e-12  Score=109.51  Aligned_cols=84  Identities=15%  Similarity=0.116  Sum_probs=60.9

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcC------------cee--ecCCCCHHHHHHH
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGG------------EVR--WMGKPDKIIYKSA  235 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~------------~~~--~~gKP~~~~~~~~  235 (313)
                      ++++.+.++.++++ +++ ++||......            ...++.++.            ...  ..-||+|..+..+
T Consensus        71 ~~g~~~~l~~l~~~-~~~~i~s~~~~~~~------------~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~  137 (206)
T 1rku_A           71 LEGAVEFVDWLRER-FQVVILSDTFYEFS------------QPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQS  137 (206)
T ss_dssp             CTTHHHHHHHHHTT-SEEEEEEEEEHHHH------------HHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHH
T ss_pred             CccHHHHHHHHHhc-CcEEEEECChHHHH------------HHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHH
Confidence            57889999999888 887 7888543211            112222211            110  1114888899999


Q ss_pred             HHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEE
Q 021350          236 MAMVGVDACDSIAVGDSLHHDIKGANAAGIQSV  268 (313)
Q Consensus       236 ~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i  268 (313)
                      +++++++|++|+||||+. +|+.+|+++|+.++
T Consensus       138 l~~l~~~~~~~~~iGD~~-~Di~~a~~aG~~~~  169 (206)
T 1rku_A          138 VIAFKSLYYRVIAAGDSY-NDTTMLSEAHAGIL  169 (206)
T ss_dssp             HHHHHHTTCEEEEEECSS-TTHHHHHHSSEEEE
T ss_pred             HHHHHhcCCEEEEEeCCh-hhHHHHHhcCccEE
Confidence            999999999999999996 99999999999755

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=99.32  E-value=1.6e-11  Score=107.54  Aligned_cols=56  Identities=20%  Similarity=0.108  Sum_probs=49.0

Q ss_pred             ccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        30 ~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      +|+|+||+||||+ +...++.+.++|++|+++|++++++|  +|+...+...++.+|++
T Consensus         2 ikli~~DlDGTLl-~~~~~~~~~~~l~~l~~~g~~~~i~T--gr~~~~~~~~~~~~~~~   57 (249)
T 2zos_A            2 IRLIFLDIDKTLI-PGYEPDPAKPIIEELKDMGFEIIFNS--SKTRAEQEYYRKELEVE   57 (249)
T ss_dssp             EEEEEECCSTTTC-TTSCSGGGHHHHHHHHHTTEEEEEBC--SSCHHHHHHHHHHHTCC
T ss_pred             ccEEEEeCCCCcc-CCCCcHHHHHHHHHHHHCCCEEEEEe--CCCHHHHHHHHHHcCCC
Confidence            6899999999999 66666779999999999999999999  88888888888888875

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.31  E-value=4.7e-12  Score=119.28  Aligned_cols=86  Identities=20%  Similarity=0.151  Sum_probs=66.7

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCc--------------------eeecCCCCH
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGE--------------------VRWMGKPDK  229 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~--------------------~~~~gKP~~  229 (313)
                      ++++.+.++.|+++|+++ ++||......            ....+.++..                    ....+||+|
T Consensus       258 ~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~------------~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~  325 (415)
T 3p96_A          258 MPGARTTLRTLRRLGYACGVVSGGFRRII------------EPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKA  325 (415)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEEEEEHHHH------------HHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHH
T ss_pred             CccHHHHHHHHHHCCCEEEEEcCCcHHHH------------HHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchH
Confidence            478899999999999998 7888543211            1122222221                    122389999


Q ss_pred             HHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 021350          230 IIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVF  269 (313)
Q Consensus       230 ~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~  269 (313)
                      ..|..+++++|++|++|+||||+. +|+.+|+++|+.+++
T Consensus       326 ~~~~~~~~~~gi~~~~~i~vGD~~-~Di~~a~~aG~~va~  364 (415)
T 3p96_A          326 TALREFAQRAGVPMAQTVAVGDGA-NDIDMLAAAGLGIAF  364 (415)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSEEEEE
T ss_pred             HHHHHHHHHcCcChhhEEEEECCH-HHHHHHHHCCCeEEE
Confidence            999999999999999999999997 999999999987775

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=99.30  E-value=3.2e-12  Score=111.73  Aligned_cols=58  Identities=10%  Similarity=0.039  Sum_probs=46.3

Q ss_pred             hcCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           27 TRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        27 ~~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      ||++ +|+||+||||+++...++.+.++|++++ .|++++++|  ||+...+.+.++++|+.
T Consensus         1 ~~~~-li~~DlDGTLl~~~~~~~~~~~~l~~~~-~gi~v~iaT--GR~~~~~~~~~~~l~l~   58 (244)
T 1s2o_A            1 MRQL-LLISDLDNTWVGDQQALEHLQEYLGDRR-GNFYLAYAT--GRSYHSARELQKQVGLM   58 (244)
T ss_dssp             CCSE-EEEECTBTTTBSCHHHHHHHHHHHHTTG-GGEEEEEEC--SSCHHHHHHHHHHHTCC
T ss_pred             CCCe-EEEEeCCCCCcCCHHHHHHHHHHHHHhc-CCCEEEEEc--CCCHHHHHHHHHHcCCC
Confidence            4556 9999999999997755566677777754 689999999  99888888888887764

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=99.26  E-value=3.7e-11  Score=107.99  Aligned_cols=47  Identities=13%  Similarity=0.188  Sum_probs=43.8

Q ss_pred             CCCHHHHHHHHHHhCCCCCc-EEEEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350          226 KPDKIIYKSAMAMVGVDACD-SIAVGDSLHHDIKGANAAGIQSVFIIGG  273 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~-~v~IGDs~~~Di~~a~~aG~~~i~V~~G  273 (313)
                      ||+|..+..++++++.++.+ |+||||+. +|+++|+++|+.++.|++|
T Consensus       252 kp~p~~~~~~~~~~~~~~~~~~~~vgD~~-~di~~a~~aG~~~~~v~~G  299 (301)
T 1ltq_A          252 RKDDVVKEEIFWKHIAPHFDVKLAIDDRT-QVVEMWRRIGVECWQVASG  299 (301)
T ss_dssp             SCHHHHHHHHHHHHTTTTCEEEEEEECCH-HHHHHHHHTTCCEEECSCC
T ss_pred             cHHHHHHHHHHHHHhccccceEEEeCCcH-HHHHHHHHcCCeEEEecCC
Confidence            99999999999999887755 79999995 9999999999999999998

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.25  E-value=2.9e-11  Score=106.58  Aligned_cols=107  Identities=14%  Similarity=0.059  Sum_probs=63.7

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCcee---ecCCCCHHHHHHHHHHhCCCCCcE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVR---WMGKPDKIIYKSAMAMVGVDACDS  246 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~gKP~~~~~~~~~~~lgv~~~~~  246 (313)
                      ++++.++++.++++|+++ ++|+.....            ....++.++....   ..+..+....+...+.+     +|
T Consensus       146 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~------------~~~~~~~~gl~~~f~~~~~~~k~~~~k~~~~~~-----~~  208 (280)
T 3skx_A          146 RPESREAISKLKAIGIKCMMLTGDNRFV------------AKWVAEELGLDDYFAEVLPHEKAEKVKEVQQKY-----VT  208 (280)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCHHH------------HHHHHHHHTCSEEECSCCGGGHHHHHHHHHTTS-----CE
T ss_pred             CHhHHHHHHHHHHCCCEEEEEeCCCHHH------------HHHHHHHcCChhHhHhcCHHHHHHHHHHHHhcC-----CE
Confidence            478899999999999998 788765421            1223333443221   12222222333333333     89


Q ss_pred             EEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCC---ccchhhHHHHHhh
Q 021350          247 IAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGE---VADLSSVQTLVSK  299 (313)
Q Consensus       247 v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~---~~~~~~~~~~~~~  299 (313)
                      +||||+. +|++|++++|+   .|..|....+.. +....   ..+.+.+.+++..
T Consensus       209 ~~vGD~~-nDi~~~~~Ag~---~va~~~~~~~~~-~~a~~~~~~~~~~~l~~~l~~  259 (280)
T 3skx_A          209 AMVGDGV-NDAPALAQADV---GIAIGAGTDVAV-ETADIVLVRNDPRDVAAIVEL  259 (280)
T ss_dssp             EEEECTT-TTHHHHHHSSE---EEECSCCSSSCC-CSSSEECSSCCTHHHHHHHHH
T ss_pred             EEEeCCc-hhHHHHHhCCc---eEEecCCcHHHH-hhCCEEEeCCCHHHHHHHHHH
Confidence            9999996 99999999994   555565444332 22222   2456666666553

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=99.22  E-value=1.2e-11  Score=109.23  Aligned_cols=60  Identities=27%  Similarity=0.377  Sum_probs=51.0

Q ss_pred             CccEEEEeccceeecC--------------------------CccCccHHHHHHHHHHCCCcEEEEeCCCCC-chHHHHH
Q 021350           29 RFKAWLLDQFGVLHDG--------------------------KKPYPGAISTLEMLATTGAKMVVISNSSRR-ASTTIDK   81 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~--------------------------~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~-~~~~~~~   81 (313)
                      ++++|+||+||||+++                          .+++|++.++|+.|++.|+++.++||.+.. ...+...
T Consensus        58 ~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~  137 (258)
T 2i33_A           58 KKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKN  137 (258)
T ss_dssp             SEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHH
T ss_pred             CCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHH
Confidence            7899999999999998                          578999999999999999999999975533 3456677


Q ss_pred             HHhCCCC
Q 021350           82 LKSLGFD   88 (313)
Q Consensus        82 l~~~G~~   88 (313)
                      |+.+|+.
T Consensus       138 L~~~Gl~  144 (258)
T 2i33_A          138 LERVGAP  144 (258)
T ss_dssp             HHHHTCS
T ss_pred             HHHcCCC
Confidence            7777775

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.22  E-value=1.9e-10  Score=102.81  Aligned_cols=85  Identities=9%  Similarity=0.076  Sum_probs=60.9

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceee-cCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRW-MGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.++++.|+++|+++ ++||.....            ....++.++....+ .-.|.  ....++++++.+ ++|+
T Consensus       164 ~~~g~~~~l~~L~~~g~~~~i~T~~~~~~------------~~~~l~~~gl~~~f~~i~~~--~K~~~~~~l~~~-~~~~  228 (287)
T 3a1c_A          164 LKESAKPAVQELKRMGIKVGMITGDNWRS------------AEAISRELNLDLVIAEVLPH--QKSEEVKKLQAK-EVVA  228 (287)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSCHHH------------HHHHHHHHTCSEEECSCCTT--CHHHHHHHHTTT-CCEE
T ss_pred             cchhHHHHHHHHHHCCCeEEEEeCCCHHH------------HHHHHHHhCCceeeeecChH--HHHHHHHHHhcC-CeEE
Confidence            3588999999999999998 788865421            22233444433221 11233  347889999999 9999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEc
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFII  271 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~  271 (313)
                      ||||+. +|+.+|+++|+. +.+.
T Consensus       229 ~vGDs~-~Di~~a~~ag~~-v~~~  250 (287)
T 3a1c_A          229 FVGDGI-NDAPALAQADLG-IAVG  250 (287)
T ss_dssp             EEECTT-TCHHHHHHSSEE-EEEC
T ss_pred             EEECCH-HHHHHHHHCCee-EEeC
Confidence            999997 999999999996 5443

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.19  E-value=1.2e-11  Score=107.17  Aligned_cols=91  Identities=14%  Similarity=0.182  Sum_probs=64.3

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceee--------cCCCCHHH-HH------
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRW--------MGKPDKII-YK------  233 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~--------~gKP~~~~-~~------  233 (313)
                      ++++.++++.|+++|+++ ++||.........   +.  .+... +. ++.....        ..||+|.. +.      
T Consensus        79 ~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~---l~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~K  152 (236)
T 2fea_A           79 REGFREFVAFINEHEIPFYVISGGMDFFVYPL---LE--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCK  152 (236)
T ss_dssp             CTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHH---HT--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCH
T ss_pred             CccHHHHHHHHHhCCCeEEEEeCCcHHHHHHH---Hh--cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccCCcH
Confidence            578999999999999998 8898644221111   11  11111 22 1222222        27999884 54      


Q ss_pred             -HHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEE
Q 021350          234 -SAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSV  268 (313)
Q Consensus       234 -~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i  268 (313)
                       .++++++++|++|+||||+. +|+.+|+++|+.++
T Consensus       153 ~~~~~~~~~~~~~~~~vGDs~-~Di~~a~~aG~~~~  187 (236)
T 2fea_A          153 PSVIHELSEPNQYIIMIGDSV-TDVEAAKLSDLCFA  187 (236)
T ss_dssp             HHHHHHHCCTTCEEEEEECCG-GGHHHHHTCSEEEE
T ss_pred             HHHHHHHhccCCeEEEEeCCh-HHHHHHHhCCeeee
Confidence             88999999999999999995 99999999999886

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.19  E-value=1e-11  Score=103.61  Aligned_cols=98  Identities=10%  Similarity=-0.033  Sum_probs=63.2

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHh--cCceeecCCCCHHHHHHHHHHhCCCCCcE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL--GGEVRWMGKPDKIIYKSAMAMVGVDACDS  246 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~gKP~~~~~~~~~~~lgv~~~~~  246 (313)
                      .++++.++++.++++|+++ ++||......... ..++...+   +..+  ........+|.+.....+++++  ++++|
T Consensus        80 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~~~  153 (201)
T 4ap9_A           80 VSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM---ANRAIFEDGKFQGIRLRFRDKGEFLKRF--RDGFI  153 (201)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE---EEEEEEETTEEEEEECCSSCHHHHHGGG--TTSCE
T ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh---eeeEEeeCCceECCcCCccCHHHHHHhc--CcCcE
Confidence            4589999999999999988 7887543222111 11111111   0000  0111111466666667777777  99999


Q ss_pred             EEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          247 IAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       247 v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      ++|||+. +|+.+|+++|+. +.+..+..
T Consensus       154 i~iGD~~-~Di~~~~~ag~~-v~~~~~~~  180 (201)
T 4ap9_A          154 LAMGDGY-ADAKMFERADMG-IAVGREIP  180 (201)
T ss_dssp             EEEECTT-CCHHHHHHCSEE-EEESSCCT
T ss_pred             EEEeCCH-HHHHHHHhCCce-EEECCCCc
Confidence            9999996 999999999995 66766543

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=99.17  E-value=3.8e-12  Score=107.43  Aligned_cols=87  Identities=15%  Similarity=0.119  Sum_probs=64.5

Q ss_pred             HHHHHHHHHHHHhC-CCcE-EEEcCCccccccchhccCCchHHHHHH-HhcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          171 LQDLEKILEICASK-KIPM-VVANPDYVTVEARALRVMPGTLASKFE-KLGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       171 ~~~~~~~l~~l~~~-g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      ++++.++++.|+++ |+++ ++||..........   .   -..+.. ++.              ..+++++|++|++|+
T Consensus        77 ~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l---~---~~~l~~~~f~--------------~~~~~~l~~~~~~~~  136 (197)
T 1q92_A           77 LPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPY---E---KYAWVEKYFG--------------PDFLEQIVLTRDKTV  136 (197)
T ss_dssp             CTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHH---H---HHHHHHHHHC--------------GGGGGGEEECSCSTT
T ss_pred             CcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHH---H---HhchHHHhch--------------HHHHHHhccCCccEE
Confidence            57999999999999 8988 89997653321110   0   001111 111              567888999999999


Q ss_pred             EEcCCchhh----HHHHH-HcCCcEEEEcCCCCCCc
Q 021350          248 AVGDSLHHD----IKGAN-AAGIQSVFIIGGIHATE  278 (313)
Q Consensus       248 ~IGDs~~~D----i~~a~-~aG~~~i~V~~G~~~~~  278 (313)
                      ||||+. .|    +.+|+ ++|+.+|++.++.....
T Consensus       137 ~vgDs~-~dD~~~~~~a~~~aG~~~i~~~~~~~~~~  171 (197)
T 1q92_A          137 VSADLL-IDDRPDITGAEPTPSWEHVLFTACHNQHL  171 (197)
T ss_dssp             SCCSEE-EESCSCCCCSCSSCSSEEEEECCTTTTTC
T ss_pred             EECccc-ccCCchhhhcccCCCceEEEecCcccccc
Confidence            999997 88    99999 99999999998766543

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=99.15  E-value=3.1e-12  Score=107.60  Aligned_cols=86  Identities=9%  Similarity=0.118  Sum_probs=62.7

Q ss_pred             HHHHHHHHHHHHhC-CCcE-EEEcCCccccccchhccCCchHHHHHHHh-cCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          171 LQDLEKILEICASK-KIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       171 ~~~~~~~l~~l~~~-g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      ++++.++++.|+++ |+++ ++||..........   ..-.+   ++.. +.              .+++++|++|++|+
T Consensus        75 ~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l---~~~gl---f~~i~~~--------------~~~~~~~~~~~~~~  134 (193)
T 2i7d_A           75 IPGALDAVREMNDLPDTQVFICTSPLLKYHHCVG---EKYRW---VEQHLGP--------------QFVERIILTRDKTV  134 (193)
T ss_dssp             CTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHH---HHHHH---HHHHHCH--------------HHHTTEEECSCGGG
T ss_pred             CcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHH---HHhCc---hhhhcCH--------------HHHHHcCCCcccEE
Confidence            57899999999998 8888 89986553222110   00011   2221 21              27889999999999


Q ss_pred             EEcCCchhh----HHHHH-HcCCcEEEEcCCCCCC
Q 021350          248 AVGDSLHHD----IKGAN-AAGIQSVFIIGGIHAT  277 (313)
Q Consensus       248 ~IGDs~~~D----i~~a~-~aG~~~i~V~~G~~~~  277 (313)
                      ||||+. +|    +.+|+ ++|+.+|++.++....
T Consensus       135 ~vgDs~-~dD~~~i~~A~~~aG~~~i~~~~~~~~~  168 (193)
T 2i7d_A          135 VLGDLL-IDDKDTVRGQEETPSWEHILFTCCHNRH  168 (193)
T ss_dssp             BCCSEE-EESSSCCCSSCSSCSSEEEEECCGGGTT
T ss_pred             EECCch-hhCcHHHhhcccccccceEEEEeccCcc
Confidence            999997 88    99999 9999999998865544

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=99.10  E-value=5.5e-11  Score=104.14  Aligned_cols=53  Identities=11%  Similarity=0.072  Sum_probs=45.0

Q ss_pred             cCccEEEEeccceeecCCcc-CccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHH
Q 021350           28 RRFKAWLLDQFGVLHDGKKP-YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKL   82 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~~~-~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l   82 (313)
                      |++|+|+||+||||+++.+. .+.+.++|++++++|++++++|  ||+...+.+.+
T Consensus         2 M~~kli~~DlDGTLl~~~~~i~~~~~~~l~~l~~~g~~~~iaT--GR~~~~~~~~l   55 (246)
T 3f9r_A            2 MKRVLLLFDVDGTLTPPRLCQTDEMRALIKRARGAGFCVGTVG--GSDFAKQVEQL   55 (246)
T ss_dssp             CCSEEEEECSBTTTBSTTSCCCHHHHHHHHHHHHTTCEEEEEC--SSCHHHHHHHH
T ss_pred             CCceEEEEeCcCCcCCCCCccCHHHHHHHHHHHHCCCEEEEEC--CCCHHHHHHHh
Confidence            57899999999999997754 4678999999999999999999  88777665444

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=98.64  E-value=1.5e-11  Score=108.82  Aligned_cols=88  Identities=11%  Similarity=0.148  Sum_probs=60.8

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      .++++.++++.|++.|+++ ++||.........            .+.++... .+..-.|..+..++++++.++++|+|
T Consensus       137 ~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~------------~~~~gl~~-~f~~~~p~~k~~~~~~l~~~~~~~~~  203 (263)
T 2yj3_A          137 PRPNLKDYLEKLKNEGLKIIILSGDKEDKVKEL------------SKELNIQE-YYSNLSPEDKVRIIEKLKQNGNKVLM  203 (263)
Confidence            4688999999999999988 7888654322111            11111110 01111144778899999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGI  274 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~  274 (313)
                      |||+. +|+.+|+++|+.   |.+|.
T Consensus       204 VGD~~-~D~~aa~~Agv~---va~g~  225 (263)
T 2yj3_A          204 IGDGV-NDAAALALADVS---VAMGN  225 (263)
Confidence            99996 999999999954   55553

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.02  E-value=1.3e-09  Score=99.37  Aligned_cols=87  Identities=15%  Similarity=0.136  Sum_probs=66.9

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCc--------------------eeecCCCC
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGE--------------------VRWMGKPD  228 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~--------------------~~~~gKP~  228 (313)
                      .++++.+.++.+++.|+++ ++||......            ....+.++..                    ....+||+
T Consensus       179 ~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~------------~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk  246 (335)
T 3n28_A          179 LMPELPELVATLHAFGWKVAIASGGFTYFS------------DYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTK  246 (335)
T ss_dssp             CCTTHHHHHHHHHHTTCEEEEEEEEEHHHH------------HHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHH
T ss_pred             cCcCHHHHHHHHHHCCCEEEEEeCCcHHHH------------HHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhh
Confidence            3578899999999999998 7887543111            1122222221                    23356999


Q ss_pred             HHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 021350          229 KIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVF  269 (313)
Q Consensus       229 ~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~  269 (313)
                      |..|+.+++++|+++++|+||||+. +|+.||+++|+..++
T Consensus       247 ~~~~~~~~~~lgi~~~~~v~vGDs~-nDi~~a~~aG~~va~  286 (335)
T 3n28_A          247 ADILLTLAQQYDVEIHNTVAVGDGA-NDLVMMAAAGLGVAY  286 (335)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSEEEEE
T ss_pred             HHHHHHHHHHcCCChhhEEEEeCCH-HHHHHHHHCCCeEEe
Confidence            9999999999999999999999996 999999999997665

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=99.00  E-value=1.9e-10  Score=101.39  Aligned_cols=52  Identities=17%  Similarity=0.234  Sum_probs=42.9

Q ss_pred             CccEEEEeccceeecCCccC-ccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHH
Q 021350           29 RFKAWLLDQFGVLHDGKKPY-PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLK   83 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~~~-~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~   83 (313)
                      ++++|+||+||||+++.+-+ +.+.++|++|+++ +.++++|  ||+...+.+.+.
T Consensus        12 ~~kli~~DlDGTLl~~~~~is~~~~~al~~l~~~-i~v~iaT--GR~~~~~~~~l~   64 (262)
T 2fue_A           12 ERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSR-VQIGVVG--GSDYCKIAEQLG   64 (262)
T ss_dssp             -CEEEEEESBTTTBSTTSCCCHHHHHHHHHHTTT-SEEEEEC--SSCHHHHHHHHS
T ss_pred             CeEEEEEeCccCCCCCCCcCCHHHHHHHHHHHhC-CEEEEEc--CCCHHHHHHHHh
Confidence            68999999999999977544 6789999999988 9999999  887766655553

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=98.96  E-value=2.4e-10  Score=99.71  Aligned_cols=52  Identities=17%  Similarity=0.134  Sum_probs=43.1

Q ss_pred             cCccEEEEeccceeecCCccC-ccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHH
Q 021350           28 RRFKAWLLDQFGVLHDGKKPY-PGAISTLEMLATTGAKMVVISNSSRRASTTIDKL   82 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~~~~-~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l   82 (313)
                      |++|+|+||+||||+++.+.+ +.+.++|++|+++ +.++++|  ||+...+.+.+
T Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-i~v~iaT--GR~~~~~~~~l   56 (246)
T 2amy_A            4 PGPALCLFDVDGTLTAPRQKITKEMDDFLQKLRQK-IKIGVVG--GSDFEKVQEQL   56 (246)
T ss_dssp             CCSEEEEEESBTTTBCTTSCCCHHHHHHHHHHTTT-SEEEEEC--SSCHHHHHHHH
T ss_pred             CCceEEEEECCCCcCCCCcccCHHHHHHHHHHHhC-CeEEEEc--CCCHHHHHHHh
Confidence            578999999999999876544 6789999999999 9999999  88766554443

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=98.90  E-value=1.1e-09  Score=95.25  Aligned_cols=53  Identities=17%  Similarity=0.089  Sum_probs=43.8

Q ss_pred             ccEEEEeccceeecC-----C-ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhC
Q 021350           30 FKAWLLDQFGVLHDG-----K-KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSL   85 (313)
Q Consensus        30 ~k~iifDlDGTL~~~-----~-~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~   85 (313)
                      +++|+||+||||++.     . .+.+.+.++|++|+++| +++++|  ||+...+.+.+..+
T Consensus         1 ikli~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l~~~g-~v~iaT--GR~~~~~~~~~~~l   59 (239)
T 1u02_A            1 MSLIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERF-DTYIVT--GRSPEEISRFLPLD   59 (239)
T ss_dssp             -CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHHS-EEEEEC--SSCHHHHHHHSCSS
T ss_pred             CeEEEEecCCCCcCCCCCcccCCCCHHHHHHHHHHhcCC-CEEEEe--CCCHHHHHHHhccc
Confidence            578999999999973     2 45578999999999999 999999  88888877776654

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=98.76  E-value=1.2e-08  Score=81.45  Aligned_cols=60  Identities=18%  Similarity=0.283  Sum_probs=50.1

Q ss_pred             cCccEEEEeccceeecCC-----ccCccHHHHHHHHHHCCCcEEEEeCCCCC---chHHHHHHHhCCCCC
Q 021350           28 RRFKAWLLDQFGVLHDGK-----KPYPGAISTLEMLATTGAKMVVISNSSRR---ASTTIDKLKSLGFDP   89 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~-----~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~---~~~~~~~l~~~G~~~   89 (313)
                      |.+++|+||+||||++..     +..|.+.++|++++++|+.++++|  +|+   .......+++.|++.
T Consensus         1 m~~k~i~~DlDGTL~~~~~~~i~~~~~~~~~al~~l~~~G~~iii~T--gR~~~~~~~~~~~l~~~gi~~   68 (142)
T 2obb_A            1 SNAMTIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQEKHRLILWS--VREGELLDEAIEWCRARGLEF   68 (142)
T ss_dssp             -CCCEEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHTTCEEEECC--SCCHHHHHHHHHHHHTTTCCC
T ss_pred             CCCeEEEEECcCCCCCCCCccccccCHHHHHHHHHHHHCCCEEEEEe--CCCcccHHHHHHHHHHcCCCe
Confidence            568999999999999965     246889999999999999999999  554   457778888888874

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=98.69  E-value=1.5e-10  Score=105.59  Aligned_cols=36  Identities=14%  Similarity=-0.048  Sum_probs=29.7

Q ss_pred             CccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEe
Q 021350           29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVIS   69 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~T   69 (313)
                      .+|+|+||+||||+++...     +++.+++..|..+.++|
T Consensus        20 ~~kli~fDlDGTLld~~~~-----~~l~~~~~~g~~~~~~t   55 (332)
T 1y8a_A           20 QGHMFFTDWEGPWILTDFA-----LELCMAVFNNARFFSNL   55 (332)
T ss_dssp             CCCEEEECSBTTTBCCCHH-----HHHHHHHHCCHHHHHHH
T ss_pred             CceEEEEECcCCCcCccHH-----HHHHHHHHCCCEEEEEc
Confidence            6899999999999998763     67888888887776666

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=98.53  E-value=1.7e-07  Score=73.18  Aligned_cols=43  Identities=21%  Similarity=0.329  Sum_probs=37.1

Q ss_pred             ccEEEEeccceeecCCc-------cCccHHHHHHHHHHCCCcEEEEeCCC
Q 021350           30 FKAWLLDQFGVLHDGKK-------PYPGAISTLEMLATTGAKMVVISNSS   72 (313)
Q Consensus        30 ~k~iifDlDGTL~~~~~-------~~~~a~~~l~~l~~~g~~~~~~Tn~~   72 (313)
                      +|+|+||+||||+++..       +.+++.+++++++++|++++++|+.+
T Consensus         1 ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~   50 (126)
T 1xpj_A            1 MKKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQLGFEIVISTARN   50 (126)
T ss_dssp             CCEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred             CCEEEEecCCCCCCCCCCccccCCCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            47999999999998654       45789999999999999999999543

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=98.48  E-value=3.2e-07  Score=75.65  Aligned_cols=81  Identities=5%  Similarity=0.043  Sum_probs=46.7

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcC---ceeecCCCCHHHHHHHHHHhCCCCCc
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGG---EVRWMGKPDKIIYKSAMAMVGVDACD  245 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~---~~~~~gKP~~~~~~~~~~~lgv~~~~  245 (313)
                      ++++.++|+.|+++ +++ ++||.... +....      .....+.. ++.   ....++--.        .++    ++
T Consensus        71 ~pg~~e~L~~L~~~-~~~~i~T~~~~~-~~~~~------~~~~~l~~~f~~~~~~~~i~~~~~--------~~l----~~  130 (180)
T 3bwv_A           71 MPHAQEVVKQLNEH-YDIYIATAAMDV-PTSFH------DKYEWLLEYFPFLDPQHFVFCGRK--------NII----LA  130 (180)
T ss_dssp             CTTHHHHHHHHTTT-SEEEEEECC--C-CSHHH------HHHHHHHHHCTTSCGGGEEECSCG--------GGB----CC
T ss_pred             CcCHHHHHHHHHhc-CCEEEEeCCCCc-chHHH------HHHHHHHHHcCCCCcccEEEeCCc--------Cee----cc
Confidence            58999999999874 888 88986310 10000      00111111 211   112222111        012    88


Q ss_pred             EEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          246 SIAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       246 ~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      |+||||++ +|+.  .++| ++|+|.++..
T Consensus       131 ~l~ieDs~-~~i~--~aaG-~~i~~~~~~~  156 (180)
T 3bwv_A          131 DYLIDDNP-KQLE--IFEG-KSIMFTASHN  156 (180)
T ss_dssp             SEEEESCH-HHHH--HCSS-EEEEECCGGG
T ss_pred             cEEecCCc-chHH--HhCC-CeEEeCCCcc
Confidence            99999997 9985  6789 9999987654

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=98.37  E-value=3.6e-08  Score=83.11  Aligned_cols=37  Identities=14%  Similarity=0.112  Sum_probs=31.2

Q ss_pred             HHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEE
Q 021350          231 IYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSV  268 (313)
Q Consensus       231 ~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i  268 (313)
                      .|.+.++++|.++++|++|+|+. .++.++.++|+..+
T Consensus       125 ~~lK~L~~Lg~~~~~~vivDDs~-~~~~~~~~ngi~i~  161 (195)
T 2hhl_A          125 NYVKDLSRLGRELSKVIIVDNSP-ASYIFHPENAVPVQ  161 (195)
T ss_dssp             EEECCGGGSSSCGGGEEEEESCG-GGGTTCGGGEEECC
T ss_pred             ceeeeHhHhCCChhHEEEEECCH-HHhhhCccCccEEe
Confidence            35556678899999999999996 99999999997653

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=98.05  E-value=3.3e-07  Score=76.22  Aligned_cols=35  Identities=11%  Similarity=0.123  Sum_probs=30.1

Q ss_pred             HHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcE
Q 021350          232 YKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQS  267 (313)
Q Consensus       232 ~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~  267 (313)
                      |.+.++++|.++++|++|||+. .++.++.++|+..
T Consensus       113 ~~k~L~~Lg~~~~~~vivdDs~-~~~~~~~~ngi~i  147 (181)
T 2ght_A          113 YVKDLSRLGRDLRRVLILDNSP-ASYVFHPDNAVPV  147 (181)
T ss_dssp             EECCGGGTCSCGGGEEEECSCG-GGGTTCTTSBCCC
T ss_pred             EeccHHHhCCCcceEEEEeCCH-HHhccCcCCEeEe
Confidence            4455677899999999999996 9999999999873

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=97.99  E-value=5.8e-06  Score=72.38  Aligned_cols=59  Identities=29%  Similarity=0.459  Sum_probs=49.8

Q ss_pred             cEEEEeccceeecCC---------------------------ccCccHHHHHHHHHHCCCcEEEEeCCCC--CchHHHHH
Q 021350           31 KAWLLDQFGVLHDGK---------------------------KPYPGAISTLEMLATTGAKMVVISNSSR--RASTTIDK   81 (313)
Q Consensus        31 k~iifDlDGTL~~~~---------------------------~~~~~a~~~l~~l~~~g~~~~~~Tn~~~--~~~~~~~~   81 (313)
                      ++|+||+||||+++.                           .++|++.++++.|++.|+++.++||...  ..+.....
T Consensus        59 ~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~  138 (260)
T 3pct_A           59 KAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDD  138 (260)
T ss_dssp             EEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHH
T ss_pred             CEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHH
Confidence            599999999999852                           3578999999999999999999997543  34677889


Q ss_pred             HHhCCCCC
Q 021350           82 LKSLGFDP   89 (313)
Q Consensus        82 l~~~G~~~   89 (313)
                      |+.+|++.
T Consensus       139 L~~lGi~~  146 (260)
T 3pct_A          139 MKRLGFTG  146 (260)
T ss_dssp             HHHHTCCC
T ss_pred             HHHcCcCc
Confidence            99999985

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=97.94  E-value=4.4e-06  Score=73.22  Aligned_cols=61  Identities=28%  Similarity=0.426  Sum_probs=51.0

Q ss_pred             CccEEEEeccceeecCC---------------------------ccCccHHHHHHHHHHCCCcEEEEeCCCC--CchHHH
Q 021350           29 RFKAWLLDQFGVLHDGK---------------------------KPYPGAISTLEMLATTGAKMVVISNSSR--RASTTI   79 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~---------------------------~~~~~a~~~l~~l~~~g~~~~~~Tn~~~--~~~~~~   79 (313)
                      ..++|+||+||||+++.                           .++|++.++++.|++.|+++.++||...  ..+...
T Consensus        57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~  136 (262)
T 3ocu_A           57 KKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTI  136 (262)
T ss_dssp             CEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHH
T ss_pred             CCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHH
Confidence            56799999999999853                           2567899999999999999999997554  346778


Q ss_pred             HHHHhCCCCC
Q 021350           80 DKLKSLGFDP   89 (313)
Q Consensus        80 ~~l~~~G~~~   89 (313)
                      ..|+.+|++.
T Consensus       137 ~~L~~lGi~~  146 (262)
T 3ocu_A          137 DDMKRLGFNG  146 (262)
T ss_dssp             HHHHHHTCSC
T ss_pred             HHHHHcCcCc
Confidence            8899999985

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=97.71  E-value=4e-05  Score=73.32  Aligned_cols=43  Identities=19%  Similarity=0.393  Sum_probs=39.9

Q ss_pred             HHHHHHHhCCCCCcEEEEcCCchhhHHHHH-HcCCcEEEEcCCC
Q 021350          232 YKSAMAMVGVDACDSIAVGDSLHHDIKGAN-AAGIQSVFIIGGI  274 (313)
Q Consensus       232 ~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~-~aG~~~i~V~~G~  274 (313)
                      +..+++.+|+..++++||||.+.+||..++ .+||+|++|..-.
T Consensus       351 ~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPEL  394 (555)
T 2jc9_A          351 SDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPEL  394 (555)
T ss_dssp             HHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTTH
T ss_pred             HHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEech
Confidence            588999999999999999999999999997 9999999998743

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=97.31  E-value=0.0068  Score=59.84  Aligned_cols=86  Identities=10%  Similarity=0.054  Sum_probs=55.7

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ..++..++++.|++.|+++ ++|++...            ........++..... ..-.|.--..+.+++.-. ++++|
T Consensus       458 l~~~~~~~i~~L~~~Gi~v~~~TGd~~~------------~a~~ia~~lgi~~~~-~~~~P~~K~~~v~~l~~~-~~v~~  523 (645)
T 3j08_A          458 LKESAKPAVQELKRMGIKVGMITGDNWR------------SAEAISRELNLDLVI-AEVLPHQKSEEVKKLQAK-EVVAF  523 (645)
T ss_dssp             CTTTHHHHHHHHHHTTCEEEEECSSCHH------------HHHHHHHHHTCSEEE-CSCCTTCHHHHHHHHTTT-CCEEE
T ss_pred             chhHHHHHHHHHHHCCCEEEEEeCCCHH------------HHHHHHHHcCCCEEE-EeCCHHhHHHHHHHHhhC-CeEEE
Confidence            3578899999999999998 66764431            112223334443322 222233444555556544 89999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCC
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGG  273 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G  273 (313)
                      |||+. ||+.+.++||   +.|.-|
T Consensus       524 vGDg~-ND~~al~~A~---vgiamg  544 (645)
T 3j08_A          524 VGDGI-NDAPALAQAD---LGIAVG  544 (645)
T ss_dssp             EECSS-SCHHHHHHSS---EEEEEC
T ss_pred             EeCCH-hHHHHHHhCC---EEEEeC
Confidence            99996 9999999999   444444

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=96.76  E-value=0.001  Score=59.00  Aligned_cols=35  Identities=23%  Similarity=0.209  Sum_probs=25.1

Q ss_pred             hCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350          239 VGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGI  274 (313)
Q Consensus       239 lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~  274 (313)
                      +.-..++++|+||+. ||..|++.+...-+.+.-|+
T Consensus       226 ~~~~~~~v~~vGDGi-NDa~m~k~l~~advgiaiGf  260 (297)
T 4fe3_A          226 QLKDNSNIILLGDSQ-GDLRMADGVANVEHILKIGY  260 (297)
T ss_dssp             HTTTCCEEEEEESSG-GGGGTTTTCSCCSEEEEEEE
T ss_pred             hhccCCEEEEEeCcH-HHHHHHhCccccCeEEEEEe
Confidence            333567899999997 99999886554445555554

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=96.42  E-value=0.017  Score=57.90  Aligned_cols=58  Identities=14%  Similarity=0.133  Sum_probs=47.5

Q ss_pred             CccEEEEeccceeec----CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           29 RFKAWLLDQFGVLHD----GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        29 ~~k~iifDlDGTL~~----~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      ....+.+..||++.-    .+++-+++.++|++|++.|++++++|  ++.........+++|++
T Consensus       533 G~~vl~va~d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlT--Gd~~~~a~~ia~~lgi~  594 (736)
T 3rfu_A          533 GASVMFMAVDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLT--GDSKRTAEAVAGTLGIK  594 (736)
T ss_dssp             TCEEEEEEETTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEEC--SSCHHHHHHHHHHHTCC
T ss_pred             CCeEEEEEECCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEEC--CCCHHHHHHHHHHcCCC
Confidence            467899999998754    56778999999999999999999999  66666666666777775

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=96.26  E-value=0.029  Score=56.05  Aligned_cols=58  Identities=16%  Similarity=0.161  Sum_probs=45.2

Q ss_pred             CccEEEEeccceeec----CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           29 RFKAWLLDQFGVLHD----GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        29 ~~k~iifDlDGTL~~----~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      ....+.+-.||++.-    .+++-|++.+++++|++.|+++.++|  ++.........+++|++
T Consensus       514 g~~~~~va~~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~T--Gd~~~~a~~ia~~lgi~  575 (723)
T 3j09_A          514 AKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMIT--GDNWRSAEAISRELNLD  575 (723)
T ss_dssp             TCEEEEEEETTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEEC--SSCHHHHHHHHHHHTCS
T ss_pred             CCeEEEEEECCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEEC--CCCHHHHHHHHHHcCCc
Confidence            467788888888654    67788999999999999999999999  65555555555666664

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=95.84  E-value=0.096  Score=54.52  Aligned_cols=44  Identities=14%  Similarity=0.164  Sum_probs=39.0

Q ss_pred             CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (313)
Q Consensus        44 ~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~   89 (313)
                      .+++-+++.++|+++++.|++++++|  |+.........+++|+..
T Consensus       602 ~Dp~r~~~~~aI~~l~~aGI~vvmiT--Gd~~~tA~~ia~~lgi~~  645 (1034)
T 3ixz_A          602 IDPPRATVPDAVLKCRTAGIRVIMVT--GDHPITAKAIAASVGIIS  645 (1034)
T ss_pred             cCCCchhHHHHHHHHHHcCCeEEEEe--CCCHHHHHHHHHHcCCCC
Confidence            56677899999999999999999999  888888888888999964

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=95.40  E-value=0.011  Score=53.16  Aligned_cols=88  Identities=14%  Similarity=0.081  Sum_probs=53.0

Q ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccc----------------cc--hHHHHHHHHHh
Q 021350           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGA----------------IT--SGELTHQYLLR  108 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~i----------------i~--~~~~~~~~l~~  108 (313)
                      +.|++.++++.|++.|+++.++||+.  .......++.+|+.... ...                ..  +.......+.+
T Consensus       179 ~~pg~~~~l~~L~~~g~~~~ivS~~~--~~~~~~~~~~lgl~~~~-~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~  255 (335)
T 3n28_A          179 LMPELPELVATLHAFGWKVAIASGGF--TYFSDYLKEQLSLDYAQ-SNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQ  255 (335)
T ss_dssp             CCTTHHHHHHHHHHTTCEEEEEEEEE--HHHHHHHHHHHTCSEEE-EEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHH
T ss_pred             cCcCHHHHHHHHHHCCCEEEEEeCCc--HHHHHHHHHHcCCCeEE-eeeeEeeCCeeeeeecccccChhhhHHHHHHHHH
Confidence            45778889999999999999999753  34445556677886322 211                11  22222333333


Q ss_pred             cCchhhhhcCCeEEEeecCcccchhhccCCccc
Q 021350          109 RDDAWFAALGRSCIHMTWSDRGAISLEGLGLKV  141 (313)
Q Consensus       109 ~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~  141 (313)
                      ...    +-...+++++-+.+....++..|+.+
T Consensus       256 ~lg----i~~~~~v~vGDs~nDi~~a~~aG~~v  284 (335)
T 3n28_A          256 QYD----VEIHNTVAVGDGANDLVMMAAAGLGV  284 (335)
T ss_dssp             HHT----CCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred             HcC----CChhhEEEEeCCHHHHHHHHHCCCeE
Confidence            220    11256777777777777788887654

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=95.21  E-value=0.071  Score=46.66  Aligned_cols=100  Identities=15%  Similarity=0.092  Sum_probs=69.2

Q ss_pred             CccEEEEeccceeec----CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHH-HHH
Q 021350           29 RFKAWLLDQFGVLHD----GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE-LTH  103 (313)
Q Consensus        29 ~~k~iifDlDGTL~~----~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~-~~~  103 (313)
                      ..+.+.||.|+++..    ..+++|++.++|+.|++.|+++.++||+.  .......++.+|+.... +.++.... .+.
T Consensus       142 g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~--~~~~~~~l~~~gl~~~f-~~i~~~~K~~~~  218 (287)
T 3a1c_A          142 AKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDN--WRSAEAISRELNLDLVI-AEVLPHQKSEEV  218 (287)
T ss_dssp             TCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSC--HHHHHHHHHHHTCSEEE-CSCCTTCHHHHH
T ss_pred             CCeEEEEEECCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCC--HHHHHHHHHHhCCceee-eecChHHHHHHH
Confidence            457899999998654    45789999999999999999999999654  44556667778886544 55553322 122


Q ss_pred             HHHHhcCchhhhhcCCeEEEeecCcccchhhccCCcc
Q 021350          104 QYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLK  140 (313)
Q Consensus       104 ~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~  140 (313)
                      +.+.        .- ..+.+++-+..+...++..|+.
T Consensus       219 ~~l~--------~~-~~~~~vGDs~~Di~~a~~ag~~  246 (287)
T 3a1c_A          219 KKLQ--------AK-EVVAFVGDGINDAPALAQADLG  246 (287)
T ss_dssp             HHHT--------TT-CCEEEEECTTTCHHHHHHSSEE
T ss_pred             HHHh--------cC-CeEEEEECCHHHHHHHHHCCee
Confidence            2221        11 4567777777767677777764

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=95.11  E-value=0.0042  Score=54.15  Aligned_cols=77  Identities=17%  Similarity=0.156  Sum_probs=49.5

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCcc-ccccchhccCCchHHHHHHHhcCce-----eec--CCCCHHHHHHHHHHhCC
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYV-TVEARALRVMPGTLASKFEKLGGEV-----RWM--GKPDKIIYKSAMAMVGV  241 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~-~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~--gKP~~~~~~~~~~~lgv  241 (313)
                      ++++.+++..++++|+++ ++||.+.. ..         ......+...|...     ..+  ++++.......++..|.
T Consensus       103 ~pg~~ell~~L~~~G~~i~ivTgR~~~~~r---------~~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~L~~~gy  173 (260)
T 3pct_A          103 IPGAVEFSNYVNANGGTMFFVSNRRDDVEK---------AGTVDDMKRLGFTGVNDKTLLLKKDKSNKSVRFKQVEDMGY  173 (260)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEEEEETTTSH---------HHHHHHHHHHTCCCCSTTTEEEESSCSSSHHHHHHHHTTTC
T ss_pred             CccHHHHHHHHHHCCCeEEEEeCCCccccH---------HHHHHHHHHcCcCccccceeEecCCCCChHHHHHHHHhcCC
Confidence            478999999999999988 88885432 10         11223344444321     222  35555555555555554


Q ss_pred             CCCcEEEEcCCchhhHHH
Q 021350          242 DACDSIAVGDSLHHDIKG  259 (313)
Q Consensus       242 ~~~~~v~IGDs~~~Di~~  259 (313)
                        +-+++|||++ +|+.+
T Consensus       174 --~iv~~iGD~~-~Dl~~  188 (260)
T 3pct_A          174 --DIVLFVGDNL-NDFGD  188 (260)
T ss_dssp             --EEEEEEESSG-GGGCG
T ss_pred             --CEEEEECCCh-HHcCc
Confidence              4499999997 99998

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=94.58  E-value=0.0046  Score=53.94  Aligned_cols=76  Identities=16%  Similarity=0.162  Sum_probs=46.3

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCcc-ccccchhccCCchHHHHHHHhcCc-----eeec--CCC-CHHHHHHHHHHhC
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYV-TVEARALRVMPGTLASKFEKLGGE-----VRWM--GKP-DKIIYKSAMAMVG  240 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~-~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~--gKP-~~~~~~~~~~~lg  240 (313)
                      ++++.+++..++++|+++ ++||.+.. ..         ......+...|..     ...+  +++ ....+..+.+ .|
T Consensus       103 ~pG~~ell~~L~~~G~ki~ivTgR~~~~~r---------~~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~l~~-~G  172 (262)
T 3ocu_A          103 VPGAVEFNNYVNSHNGKVFYVTNRKDSTEK---------SGTIDDMKRLGFNGVEESAFYLKKDKSAKAARFAEIEK-QG  172 (262)
T ss_dssp             CTTHHHHHHHHHHTTEEEEEEEEEETTTTH---------HHHHHHHHHHTCSCCSGGGEEEESSCSCCHHHHHHHHH-TT
T ss_pred             CccHHHHHHHHHHCCCeEEEEeCCCccchH---------HHHHHHHHHcCcCcccccceeccCCCCChHHHHHHHHh-cC
Confidence            478899999999999988 88875432 10         1112234444432     1221  133 3444555544 45


Q ss_pred             CCCCcEEEEcCCchhhHHH
Q 021350          241 VDACDSIAVGDSLHHDIKG  259 (313)
Q Consensus       241 v~~~~~v~IGDs~~~Di~~  259 (313)
                      .  .-+++|||++ +|+.+
T Consensus       173 y--~iv~~vGD~~-~Dl~~  188 (262)
T 3ocu_A          173 Y--EIVLYVGDNL-DDFGN  188 (262)
T ss_dssp             E--EEEEEEESSG-GGGCS
T ss_pred             C--CEEEEECCCh-HHhcc
Confidence            4  3499999997 99998

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=94.50  E-value=0.12  Score=53.65  Aligned_cols=44  Identities=14%  Similarity=0.311  Sum_probs=36.9

Q ss_pred             CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (313)
Q Consensus        44 ~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~   89 (313)
                      .+++-|++.++|+.|++.|+++.++|  |..........+++|+..
T Consensus       601 ~D~lr~~~~~~I~~l~~~Gi~v~miT--GD~~~ta~~ia~~lgi~~  644 (995)
T 3ar4_A          601 LDPPRKEVMGSIQLCRDAGIRVIMIT--GDNKGTAIAICRRIGIFG  644 (995)
T ss_dssp             ECCBCTTHHHHHHHHHHTTCEEEEEE--SSCHHHHHHHHHHHTSSC
T ss_pred             cCCCchhHHHHHHHHHHcCCEEEEEC--CCCHHHHHHHHHHcCcCC
Confidence            56777999999999999999999999  666666677777788863

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=94.13  E-value=0.19  Score=47.34  Aligned_cols=43  Identities=16%  Similarity=0.278  Sum_probs=37.3

Q ss_pred             HHHHHHHhCCCCCcEEEEcCCchhhHHHHHH-cCCcEEEEcCCC
Q 021350          232 YKSAMAMVGVDACDSIAVGDSLHHDIKGANA-AGIQSVFIIGGI  274 (313)
Q Consensus       232 ~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~-aG~~~i~V~~G~  274 (313)
                      ...+.+.+|..-.++++|||++..||..++. .||+|++|....
T Consensus       284 ~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~EL  327 (470)
T 4g63_A          284 AKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEEL  327 (470)
T ss_dssp             HHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTTH
T ss_pred             HHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHHH
Confidence            5567778899999999999999999988875 699999998754

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=93.89  E-value=0.59  Score=48.54  Aligned_cols=44  Identities=14%  Similarity=0.201  Sum_probs=38.0

Q ss_pred             CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (313)
Q Consensus        44 ~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~   89 (313)
                      .+++-|++.++|++|++.|++++++|  |+.........+++|+..
T Consensus       597 ~Dplr~~~~~aI~~l~~aGI~v~miT--GD~~~tA~~ia~~lgi~~  640 (1028)
T 2zxe_A          597 IDPPRAAVPDAVGKCRSAGIKVIMVT--GDHPITAKAIAKGVGIIS  640 (1028)
T ss_dssp             ECCBCTTHHHHHHHHHHTTCEEEEEC--SSCHHHHHHHHHHHTSSC
T ss_pred             CCCCChhHHHHHHHHHHcCCEEEEEC--CCCHHHHHHHHHHcCCCC
Confidence            56777999999999999999999999  877777777778888864

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=93.57  E-value=0.081  Score=48.73  Aligned_cols=45  Identities=9%  Similarity=0.052  Sum_probs=34.3

Q ss_pred             eecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCC
Q 021350           41 LHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGF   87 (313)
Q Consensus        41 L~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~   87 (313)
                      ...+.++.|++.+.++.|+++|+++.++|  +.....+....+++|+
T Consensus       216 ~~~gir~~p~~~eLi~~L~~~G~~v~IVS--gg~~~~v~~ia~~lg~  260 (385)
T 4gxt_A          216 YFVGIRTLDEMVDLYRSLEENGIDCYIVS--ASFIDIVRAFATDTNN  260 (385)
T ss_dssp             EEECCEECHHHHHHHHHHHHTTCEEEEEE--EEEHHHHHHHHHCTTS
T ss_pred             eccCceeCHHHHHHHHHHHHCCCeEEEEc--CCcHHHHHHHHHHhCc
Confidence            34456789999999999999999999999  4334445555566765

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=93.21  E-value=0.049  Score=49.91  Aligned_cols=54  Identities=7%  Similarity=0.079  Sum_probs=40.1

Q ss_pred             CccEEEEeccceeecCCc-----------------------------------------cCccHHHHHHHHHHCCCcEEE
Q 021350           29 RFKAWLLDQFGVLHDGKK-----------------------------------------PYPGAISTLEMLATTGAKMVV   67 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~-----------------------------------------~~~~a~~~l~~l~~~g~~~~~   67 (313)
                      +.++++|||||||+++..                                         .-|++.++|+.+. .++.+++
T Consensus        17 ~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l~-~~yeivI   95 (372)
T 3ef0_A           17 KRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKIS-ELYELHI   95 (372)
T ss_dssp             TCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHH-TTEEEEE
T ss_pred             CCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHHh-cCcEEEE
Confidence            789999999999999720                                         1377889998887 7789999


Q ss_pred             EeCCCCCc-hHHHHHHH
Q 021350           68 ISNSSRRA-STTIDKLK   83 (313)
Q Consensus        68 ~Tn~~~~~-~~~~~~l~   83 (313)
                      .|.+.+.. ..+.+.+.
T Consensus        96 ~Tas~~~yA~~vl~~LD  112 (372)
T 3ef0_A           96 YTMGTKAYAKEVAKIID  112 (372)
T ss_dssp             ECSSCHHHHHHHHHHHC
T ss_pred             EeCCcHHHHHHHHHHhc
Confidence            99665443 34555553

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=92.98  E-value=0.098  Score=43.75  Aligned_cols=56  Identities=18%  Similarity=0.081  Sum_probs=40.7

Q ss_pred             CccEEEEeccceeecCC---------ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCC
Q 021350           29 RFKAWLLDQFGVLHDGK---------KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGF   87 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~---------~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~   87 (313)
                      +..++++|+|+||+++.         ..-|++.++|+.+. +++++++.|.+.+  .-....++.++.
T Consensus        33 ~~~tLVLDLDeTLvh~~~~~~~~~~v~~RPgl~eFL~~l~-~~yeivI~Tas~~--~ya~~vl~~LDp   97 (204)
T 3qle_A           33 RPLTLVITLEDFLVHSEWSQKHGWRTAKRPGADYFLGYLS-QYYEIVLFSSNYM--MYSDKIAEKLDP   97 (204)
T ss_dssp             CSEEEEEECBTTTEEEEEETTTEEEEEECTTHHHHHHHHT-TTEEEEEECSSCH--HHHHHHHHHTST
T ss_pred             CCeEEEEeccccEEeeeccccCceeEEeCCCHHHHHHHHH-hCCEEEEEcCCcH--HHHHHHHHHhCC
Confidence            56899999999999852         23489999999997 7799999995542  333334444554

>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A

Probab=89.51  E-value=0.23  Score=42.50  Aligned_cols=81  Identities=16%  Similarity=0.213  Sum_probs=52.6

Q ss_pred             CcEEEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCC
Q 021350          186 IPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGI  265 (313)
Q Consensus       186 ~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~  265 (313)
                      +.+++|++..+-...+.+..+.+.+...-...  ....+||-+  .|+.+.+|+| +.-..++|||.. .--++|++.++
T Consensus       178 vNVLVTs~qLVPaLaK~LLygL~~~fpieNIY--Sa~kiGKes--CFerI~~RFG-~k~~yvvIGDG~-eEe~AAk~~n~  251 (274)
T 3geb_A          178 VNVLVTTTQLIPALAKVLLYGLGSVFPIENIY--SATKTGKES--CFERIMQRFG-RKAVYVVIGDGV-EEEQGAKKHNM  251 (274)
T ss_dssp             EEEEEESSCHHHHHHHHHHTTCTTTSCGGGEE--ETTTTCHHH--HHHHHHHHHC-TTSEEEEEESSH-HHHHHHHHTTC
T ss_pred             eEEEEecCchHHHHHHHHHhhcccceeccccc--chhhcCHHH--HHHHHHHHhC-CCceEEEECCCH-HHHHHHHHcCC
Confidence            34577876654433443333333222211100  012245554  9999999998 668899999995 77889999999


Q ss_pred             cEEEEcC
Q 021350          266 QSVFIIG  272 (313)
Q Consensus       266 ~~i~V~~  272 (313)
                      +.+-|.+
T Consensus       252 PFwrI~~  258 (274)
T 3geb_A          252 PFWRISC  258 (274)
T ss_dssp             CEEECCS
T ss_pred             CeEEeec
Confidence            9998876

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=89.21  E-value=0.9  Score=38.59  Aligned_cols=100  Identities=11%  Similarity=0.105  Sum_probs=68.1

Q ss_pred             ccEEEEeccceeec----CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHH-HHH
Q 021350           30 FKAWLLDQFGVLHD----GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL-THQ  104 (313)
Q Consensus        30 ~k~iifDlDGTL~~----~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~-~~~  104 (313)
                      ...+....+|.+..    ...+.|++.+.++.|++.|+++.++||.  ........++.+|+.... +.+++.... ...
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~--~~~~~~~~~~~~gl~~~f-~~~~~~~k~~~~k  200 (280)
T 3skx_A          124 KTVVFILKNGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGD--NRFVAKWVAEELGLDDYF-AEVLPHEKAEKVK  200 (280)
T ss_dssp             CEEEEEEETTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSS--CHHHHHHHHHHHTCSEEE-CSCCGGGHHHHHH
T ss_pred             CeEEEEEECCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCC--CHHHHHHHHHHcCChhHh-HhcCHHHHHHHHH
Confidence            35566666776543    3367899999999999999999999954  355566777888987655 666665443 233


Q ss_pred             HHHhcCchhhhhcCCeEEEeecCcccchhhccCCccc
Q 021350          105 YLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKV  141 (313)
Q Consensus       105 ~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~  141 (313)
                      .+.+.+         .+.+++-+.++...++..|+.+
T Consensus       201 ~~~~~~---------~~~~vGD~~nDi~~~~~Ag~~v  228 (280)
T 3skx_A          201 EVQQKY---------VTAMVGDGVNDAPALAQADVGI  228 (280)
T ss_dssp             HHHTTS---------CEEEEECTTTTHHHHHHSSEEE
T ss_pred             HHHhcC---------CEEEEeCCchhHHHHHhCCceE
Confidence            333332         4566666777777777777644

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=88.02  E-value=0.43  Score=42.66  Aligned_cols=56  Identities=23%  Similarity=0.143  Sum_probs=39.1

Q ss_pred             CccEEEEeccceeecCCc--------cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCC
Q 021350           29 RFKAWLLDQFGVLHDGKK--------PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGF   87 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~--------~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~   87 (313)
                      .-+++++|+||||+++..        .=|++.++|+.+. ..+.+++.|.+.  ..-....+..++.
T Consensus       139 ~k~tLVLDLDeTLvh~~~~~~~~~~~~RP~l~eFL~~l~-~~yeivIfTas~--~~ya~~vld~Ld~  202 (320)
T 3shq_A          139 GKKLLVLDIDYTLFDHRSPAETGTELMRPYLHEFLTSAY-EDYDIVIWSATS--MRWIEEKMRLLGV  202 (320)
T ss_dssp             TCEEEEECCBTTTBCSSSCCSSHHHHBCTTHHHHHHHHH-HHEEEEEECSSC--HHHHHHHHHHTTC
T ss_pred             CCcEEEEeccccEEcccccCCCcceEeCCCHHHHHHHHH-hCCEEEEEcCCc--HHHHHHHHHHhCC
Confidence            347899999999999652        2378999999988 558888888443  3333344454554

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=87.68  E-value=0.76  Score=37.48  Aligned_cols=50  Identities=14%  Similarity=0.353  Sum_probs=39.4

Q ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~   99 (313)
                      ++|++.+.++.|++.|+++.++||+.  .......++.+|+.... +.++++.
T Consensus        85 ~~pg~~~~l~~L~~~g~~~~i~tn~~--~~~~~~~l~~~~l~~~f-d~~~~~~  134 (216)
T 3kbb_A           85 ENPGVREALEFVKSKRIKLALATSTP--QREALERLRRLDLEKYF-DVMVFGD  134 (216)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSC--HHHHHHHHHHTTCGGGC-SEEECGG
T ss_pred             cCccHHHHHHHHHHcCCCcccccCCc--HHHHHHHHHhcCCCccc-ccccccc
Confidence            57889999999999999999999764  45666778888987655 6666543

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=86.61  E-value=0.13  Score=44.45  Aligned_cols=55  Identities=18%  Similarity=0.265  Sum_probs=39.5

Q ss_pred             ceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCccccccc
Q 021350           39 GVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAI   96 (313)
Q Consensus        39 GTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii   96 (313)
                      |++....+++|++.++|+.|++.|+++.++||..  .......++.+|+.... +.++
T Consensus       129 ~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~--~~~~~~~~~~~gl~~~f-~~~~  183 (263)
T 2yj3_A          129 ASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDK--EDKVKELSKELNIQEYY-SNLS  183 (263)
Confidence            3344456788999999999999999999999754  33445556677886444 4444

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=86.29  E-value=2.1  Score=42.03  Aligned_cols=99  Identities=14%  Similarity=0.098  Sum_probs=69.5

Q ss_pred             CccEEEEeccceeec----CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHH-HHH
Q 021350           29 RFKAWLLDQFGVLHD----GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE-LTH  103 (313)
Q Consensus        29 ~~k~iifDlDGTL~~----~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~-~~~  103 (313)
                      ....+.+..||++.-    .+++.|++.+++++|++.|+++.++|  ++.........+++|++... .++..... ...
T Consensus       436 g~~~l~va~~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~T--Gd~~~~a~~ia~~lgi~~~~-~~~~P~~K~~~v  512 (645)
T 3j08_A          436 AKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMIT--GDNWRSAEAISRELNLDLVI-AEVLPHQKSEEV  512 (645)
T ss_dssp             TCCCEEEEETTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEEC--SSCHHHHHHHHHHHTCSEEE-CSCCTTCHHHHH
T ss_pred             CCeEEEEEECCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEe--CCCHHHHHHHHHHcCCCEEE-EeCCHHhHHHHH
Confidence            457788888888653    67788999999999999999999999  77777777788888997433 34433222 223


Q ss_pred             HHHHhcCchhhhhcCCeEEEeecCcccchhhccCCc
Q 021350          104 QYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGL  139 (313)
Q Consensus       104 ~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~  139 (313)
                      +.+.+.         ..+..++-+.+....++..++
T Consensus       513 ~~l~~~---------~~v~~vGDg~ND~~al~~A~v  539 (645)
T 3j08_A          513 KKLQAK---------EVVAFVGDGINDAPALAQADL  539 (645)
T ss_dssp             HHHTTT---------CCEEEEECSSSCHHHHHHSSE
T ss_pred             HHHhhC---------CeEEEEeCCHhHHHHHHhCCE
Confidence            333322         356677777777777776654

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=85.76  E-value=1.3  Score=37.48  Aligned_cols=50  Identities=32%  Similarity=0.333  Sum_probs=39.3

Q ss_pred             ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (313)
Q Consensus        46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~   99 (313)
                      .++|++.++++.|++.|+++.++||...   .+...++.+|+.... +.++++.
T Consensus       106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~---~~~~~l~~~gl~~~f-~~~~~~~  155 (263)
T 3k1z_A          106 QVLDGAEDTLRECRTRGLRLAVISNFDR---RLEGILGGLGLREHF-DFVLTSE  155 (263)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEESCCT---THHHHHHHTTCGGGC-SCEEEHH
T ss_pred             eECcCHHHHHHHHHhCCCcEEEEeCCcH---HHHHHHHhCCcHHhh-hEEEeec
Confidence            3678899999999999999999998553   256778889986555 6666654

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=85.69  E-value=4.9  Score=33.54  Aligned_cols=115  Identities=17%  Similarity=0.177  Sum_probs=67.1

Q ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHH---------HHHHHHhcCchhhhhc
Q 021350           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL---------THQYLLRRDDAWFAAL  117 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~---------~~~~l~~~~~~~~~~~  117 (313)
                      ++|++.+.++.|+++|+++.++||+.+    ....++.+|+.... +.++++...         ....+.+..     +-
T Consensus        96 ~~pg~~~ll~~L~~~g~~i~i~t~~~~----~~~~l~~~gl~~~f-d~i~~~~~~~~~KP~p~~~~~a~~~lg-----~~  165 (243)
T 4g9b_A           96 VLPGIRSLLADLRAQQISVGLASVSLN----APTILAALELREFF-TFCADASQLKNSKPDPEIFLAACAGLG-----VP  165 (243)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCCCTT----HHHHHHHTTCGGGC-SEECCGGGCSSCTTSTHHHHHHHHHHT-----SC
T ss_pred             ccccHHHHHHhhhcccccceecccccc----hhhhhhhhhhcccc-ccccccccccCCCCcHHHHHHHHHHcC-----CC
Confidence            578999999999999999999887542    23457788887554 666654221         111121111     11


Q ss_pred             CCeEEEeecCcccchhhccCCccccC---CCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 021350          118 GRSCIHMTWSDRGAISLEGLGLKVVE---NVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICA  182 (313)
Q Consensus       118 g~~~~~~~~~~~~~~~l~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  182 (313)
                      -..+.+++-...+....+..|+..+-   .+..++.++-.           ...++++.+.+.++.+.
T Consensus       166 p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~~~ad~~~~~-----------~~~l~~~~l~~~~~~l~  222 (243)
T 4g9b_A          166 PQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPS-----------TESLTWPRLSAFWQNVA  222 (243)
T ss_dssp             GGGEEEEESSHHHHHHHHHHTCEEEEESTTCCSCSEEESS-----------GGGCCHHHHHHHHHHHS
T ss_pred             hHHEEEEcCCHHHHHHHHHcCCEEEEECCCCCcHHHhcCC-----------hhhcCHHHHHHHHHHHH
Confidence            24566666666655666667765321   12223333221           14466788888877653

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=85.43  E-value=0.87  Score=36.95  Aligned_cols=89  Identities=15%  Similarity=0.102  Sum_probs=54.0

Q ss_pred             ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCccccccc------------------chHHHHHHHHH
Q 021350           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAI------------------TSGELTHQYLL  107 (313)
Q Consensus        46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii------------------~~~~~~~~~l~  107 (313)
                      .+.|++.+.++.|++.|+++.++||+.  .......++.+|+.... +.++                  .+.......+.
T Consensus        75 ~~~~~~~~~l~~l~~~g~~~~i~S~~~--~~~~~~~l~~~gl~~~f-~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~  151 (217)
T 3m1y_A           75 PLFEGALELVSALKEKNYKVVCFSGGF--DLATNHYRDLLHLDAAF-SNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQ  151 (217)
T ss_dssp             CBCBTHHHHHHHHHTTTEEEEEEEEEE--HHHHHHHHHHHTCSEEE-EEEEEEETTEEEEEEEESCCSTTHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHCCCEEEEEcCCc--hhHHHHHHHHcCcchhc-cceeEEeCCEEEeeeccCCCCCCChHHHHHHHH
Confidence            467899999999999999999999754  34445566777886433 4332                  12222223332


Q ss_pred             hcCchhhhhcCCeEEEeecCcccchhhccCCccc
Q 021350          108 RRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKV  141 (313)
Q Consensus       108 ~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~  141 (313)
                      ++..    +--..+++++-+......++..|+.+
T Consensus       152 ~~~g----~~~~~~i~vGDs~~Di~~a~~aG~~~  181 (217)
T 3m1y_A          152 RLLN----ISKTNTLVVGDGANDLSMFKHAHIKI  181 (217)
T ss_dssp             HHHT----CCSTTEEEEECSGGGHHHHTTCSEEE
T ss_pred             HHcC----CCHhHEEEEeCCHHHHHHHHHCCCeE
Confidence            2210    01245666666666566667777643

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=84.53  E-value=0.64  Score=38.26  Aligned_cols=50  Identities=22%  Similarity=0.246  Sum_probs=37.0

Q ss_pred             ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (313)
Q Consensus        46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~   99 (313)
                      .++|++.++++.|++.|+++.++||+.+   .+...++.+|+.... +.++++.
T Consensus        95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~---~~~~~l~~~gl~~~f-~~~~~~~  144 (220)
T 2zg6_A           95 FLYDDTLEFLEGLKSNGYKLALVSNASP---RVKTLLEKFDLKKYF-DALALSY  144 (220)
T ss_dssp             EECTTHHHHHHHHHTTTCEEEECCSCHH---HHHHHHHHHTCGGGC-SEEC---
T ss_pred             eECcCHHHHHHHHHHCCCEEEEEeCCcH---HHHHHHHhcCcHhHe-eEEEecc
Confidence            3578999999999999999999998743   356778888887544 6666553

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=84.20  E-value=1.2  Score=36.55  Aligned_cols=48  Identities=29%  Similarity=0.374  Sum_probs=35.7

Q ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccc
Q 021350           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAIT   97 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~   97 (313)
                      ++|++.++++.|++.|+++.++||+.  .......++.+|+.... +.+++
T Consensus        84 ~~~~~~~~l~~l~~~g~~~~i~s~~~--~~~~~~~l~~~gl~~~f-~~i~~  131 (222)
T 2nyv_A           84 PYPEIPYTLEALKSKGFKLAVVSNKL--EELSKKILDILNLSGYF-DLIVG  131 (222)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSC--HHHHHHHHHHTTCGGGC-SEEEC
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEcCCC--HHHHHHHHHHcCCHHHh-eEEEe
Confidence            46888999999999999999999754  34556677888876433 44544

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=83.77  E-value=0.89  Score=41.70  Aligned_cols=52  Identities=17%  Similarity=0.254  Sum_probs=40.7

Q ss_pred             ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccc--cccchHH
Q 021350           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFA--GAITSGE  100 (313)
Q Consensus        46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~--~ii~~~~  100 (313)
                      +++|++.++|+.|+++|+++.++||+.  ...+...++.+|+.... +  .++++..
T Consensus       215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~--~~~~~~~L~~lgL~~~F-d~~~Ivs~dd  268 (384)
T 1qyi_A          215 RPVDEVKVLLNDLKGAGFELGIATGRP--YTETVVPFENLGLLPYF-EADFIATASD  268 (384)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEECSSC--HHHHHHHHHHHTCGGGS-CGGGEECHHH
T ss_pred             CcCcCHHHHHHHHHhCCCEEEEEeCCc--HHHHHHHHHHcCChHhc-CCCEEEeccc
Confidence            567899999999999999999999774  44566677888987554 6  5666553

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=83.11  E-value=1.6  Score=35.73  Aligned_cols=48  Identities=19%  Similarity=0.177  Sum_probs=37.5

Q ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~   99 (313)
                      ++|++.+.++.|++.|+++.++||+.+    ....++.+|+.... +.++++.
T Consensus        93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~----~~~~l~~~gl~~~f-~~i~~~~  140 (233)
T 3nas_A           93 LLPGIGRLLCQLKNENIKIGLASSSRN----APKILRRLAIIDDF-HAIVDPT  140 (233)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEECCSCTT----HHHHHHHTTCTTTC-SEECCC-
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEcCchh----HHHHHHHcCcHhhc-CEEeeHh
Confidence            578999999999999999999998743    55667888987554 6666543

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=82.89  E-value=1.7  Score=34.71  Aligned_cols=49  Identities=12%  Similarity=0.222  Sum_probs=37.5

Q ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~   98 (313)
                      ++|++.+.++.|++.|+++.++||+.  ...+...++.+|+.... +.++++
T Consensus        90 ~~~~~~~~l~~l~~~g~~~~i~s~~~--~~~~~~~l~~~~l~~~f-~~~~~~  138 (214)
T 3e58_A           90 IFPDVLKVLNEVKSQGLEIGLASSSV--KADIFRALEENRLQGFF-DIVLSG  138 (214)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHTTCGGGC-SEEEEG
T ss_pred             cCchHHHHHHHHHHCCCCEEEEeCCc--HHHHHHHHHHcCcHhhe-eeEeec
Confidence            56788899999999999999999764  45566778888886544 555543

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=82.81  E-value=1.7  Score=35.48  Aligned_cols=49  Identities=18%  Similarity=0.310  Sum_probs=37.4

Q ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~   98 (313)
                      ++|++.++++.|++.|+++.++||+.  .......++.+|+.... +.++++
T Consensus       100 ~~~~~~~~l~~l~~~g~~~~i~t~~~--~~~~~~~l~~~~l~~~f-~~~~~~  148 (233)
T 3umb_A          100 AFPENVPVLRQLREMGLPLGILSNGN--PQMLEIAVKSAGMSGLF-DHVLSV  148 (233)
T ss_dssp             ECTTHHHHHHHHHTTTCCEEEEESSC--HHHHHHHHHTTTCTTTC-SEEEEG
T ss_pred             CCCCHHHHHHHHHhCCCcEEEEeCCC--HHHHHHHHHHCCcHhhc-CEEEEe
Confidence            36788899999999999999999764  45566677888987544 555544

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=81.97  E-value=2.7  Score=42.99  Aligned_cols=28  Identities=18%  Similarity=0.253  Sum_probs=23.1

Q ss_pred             CcEEEEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350          244 CDSIAVGDSLHHDIKGANAAGIQSVFIIGG  273 (313)
Q Consensus       244 ~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G  273 (313)
                      +.+.|+||+. ||..+.++|++ +|.+.+|
T Consensus       627 ~~Vam~GDGv-NDapaLk~Adv-GIAmg~g  654 (920)
T 1mhs_A          627 YLVAMTGDGV-NDAPSLKKADT-GIAVEGS  654 (920)
T ss_dssp             CCCEECCCCG-GGHHHHHHSSE-EEEETTS
T ss_pred             CeEEEEcCCc-ccHHHHHhCCc-Ccccccc
Confidence            7899999997 99999999994 5556543

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=81.68  E-value=2  Score=35.32  Aligned_cols=41  Identities=10%  Similarity=0.142  Sum_probs=33.5

Q ss_pred             ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      .++|++.+.|+.|+++|+++.++||+.  ...+...++.+|++
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~--~~~~~~~~~~~g~~  132 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATN--SFVTAPIARAFGVQ  132 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHTTCC
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHcCCC
Confidence            457899999999999999999999654  45556677788886

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=81.16  E-value=1.4  Score=36.06  Aligned_cols=40  Identities=18%  Similarity=0.168  Sum_probs=31.8

Q ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      ++|++.++|+.|+++|+++.++||+.  .......++.+|+.
T Consensus        87 ~~~g~~~~l~~L~~~g~~~~i~T~~~--~~~~~~~l~~~gl~  126 (225)
T 1nnl_A           87 LTPGIRELVSRLQERNVQVFLISGGF--RSIVEHVASKLNIP  126 (225)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEE--HHHHHHHHHHTTCC
T ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCh--HHHHHHHHHHcCCC
Confidence            46788899999999999999999654  44556667788886

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=80.12  E-value=1  Score=36.74  Aligned_cols=46  Identities=24%  Similarity=0.344  Sum_probs=29.9

Q ss_pred             CccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccc
Q 021350           48 YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAIT   97 (313)
Q Consensus        48 ~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~   97 (313)
                      +|++.+.++.|++ |+++.++||+.  .......++.+|+.... +.+++
T Consensus        86 ~~g~~~~l~~L~~-~~~l~i~T~~~--~~~~~~~l~~~gl~~~f-~~i~~  131 (210)
T 2ah5_A           86 FPQIIDLLEELSS-SYPLYITTTKD--TSTAQDMAKNLEIHHFF-DGIYG  131 (210)
T ss_dssp             CTTHHHHHHHHHT-TSCEEEEEEEE--HHHHHHHHHHTTCGGGC-SEEEE
T ss_pred             CCCHHHHHHHHHc-CCeEEEEeCCC--HHHHHHHHHhcCchhhe-eeeec
Confidence            4667777778887 88888888654  33445567777876544 44443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	313
d1yv9a1	253	c.108.1.14 (A:4-256) Putative hydrolase EF1188 {En	7e-27
d1vjra_	261	c.108.1.14 (A:) Hypothetical protein TM1742 {Therm	2e-26
d1wvia_	253	c.108.1.14 (A:) Putative phosphatase SMU.1415c {St	7e-26
d2c4na1	250	c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId	8e-21
d1qq5a_	245	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan	5e-07
d1cr6a1	222	c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal	2e-06
d2fi1a1	187	c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str	9e-06
d1zs9a1	253	c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien	1e-05
d2g80a1	225	c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast	2e-05
d1x42a1	230	c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A	2e-05
d1qyia_	380	c.108.1.13 (A:) Hypothetical protein MW1667 (SA154	3e-05
d2b0ca1	197	c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc	7e-05
d2fpwa1	161	c.108.1.19 (A:3-163) Histidine biosynthesis bifunc	1e-04
d2go7a1	204	c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S	1e-04
d2o2xa1	209	c.108.1.19 (A:8-216) Hypothetical protein Mll2559	2e-04
d1u7pa_	164	c.108.1.17 (A:) Magnesium-dependent phosphatase-1,	2e-04
d1te2a_	218	c.108.1.6 (A:) Phosphatase YniC {Escherichia coli	2e-04
d2gfha1	247	c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas	4e-04
d1zd3a1	225	c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal	6e-04
d1o08a_	221	c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu	0.001

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

 Score =  104 bits (258), Expect = 7e-27
 Identities = 50/285 (17%), Positives = 97/285 (34%), Gaps = 39/285 (13%)

Query: 30  FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLGFD 88
           ++ +L+D  G ++ GK+P P     +E L       + ++N +++   T   +L +    
Sbjct: 2   YQGYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDI 61

Query: 89  PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEA 148
               +   T+   T  Y+   +           + +         +   G +  E     
Sbjct: 62  HVPASLVYTATLATIDYMKEANRGK-------KVFVIGEAGLIDLILEAGFEWDE--TNP 112

Query: 149 DFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPG 208
           D+++      +      +  +++Q           K    +  NPD      R L    G
Sbjct: 113 DYVVVGLDTELSYEKVVLATLAIQ-----------KGALFIGTNPDKNIPTERGLLPGAG 161

Query: 209 -TLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQS 267
             +         +  ++GKP  II + A+A +GV+    I VGD+   DI+     GI S
Sbjct: 162 SVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDS 221

Query: 268 VFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS 312
           + +  G                       V      P+YV+ S  
Sbjct: 222 LLVTSGFTPKS-----------------AVPTLPTPPTYVVDSLD 249

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} Length = 261

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

 Score =  102 bits (255), Expect = 2e-26
 Identities = 52/286 (18%), Positives = 101/286 (35%), Gaps = 39/286 (13%)

Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88
           + + ++LD  G  +      PG++  LE L     + V  +N+S   +    +       
Sbjct: 6   KIELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGV 65

Query: 89  PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEA 148
                  +TSGE+T +++L+R        GR  I +  + +     E  G  + E  E  
Sbjct: 66  DVPDDAVVTSGEITAEHMLKR-------FGRCRIFLLGTPQLKKVFEAYGHVIDE--ENP 116

Query: 149 DFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPG 208
           DF++    + +            +  +  + +   K    +  +PD             G
Sbjct: 117 DFVVLGFDKTL---------TYERLKKACILLRKGK--FYIATHPDINCPSKEGPVPDAG 165

Query: 209 TLASKFEKLGGEVRWM--GKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQ 266
           ++ +  E   G    +  GKP+ ++        GV       VGD L+ D+K    AGI 
Sbjct: 166 SIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIV 225

Query: 267 SVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS 312
           S+ ++ G    E                  + + +  P +V  +  
Sbjct: 226 SILVLTGETTPE-----------------DLERAETKPDFVFKNLG 254

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

 Score =  101 bits (251), Expect = 7e-26
 Identities = 46/285 (16%), Positives = 90/285 (31%), Gaps = 39/285 (13%)

Query: 30  FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLGFD 88
           +K +L+D  G ++ GK   P     ++ L       ++++N ++R      + L +    
Sbjct: 2   YKGYLIDLDGTIYKGKDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNI 61

Query: 89  PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEA 148
            +      T+   T  Y+                ++        ++   G +        
Sbjct: 62  KTPLETIYTATLATIDYMNDMKRGK-------TAYVIGETGLKKAVAEAGYREDSENPAY 114

Query: 149 DFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPG 208
             +            G    ++ + L     +   K    +  NPD      R L    G
Sbjct: 115 VVV------------GLDTNLTYEKLTLA-TLAIQKGAVFIGTNPDLNIPTERGLLPGAG 161

Query: 209 -TLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQS 267
             L    +    +   +GKP+ +I   A+  +GV   ++I VGD+   DI       I +
Sbjct: 162 AILFLLEKATRVKPIIIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIAT 221

Query: 268 VFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS 312
           + +  G    E                  V      P +VL S +
Sbjct: 222 LLVTTGFTKPE-----------------EVPALPIQPDFVLSSLA 249

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} Length = 250

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

 Score = 87.5 bits (215), Expect = 8e-21
 Identities = 44/285 (15%), Positives = 91/285 (31%), Gaps = 42/285 (14%)

Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88
             K  + D  GVL       PGA   L  +   G  +V+++N   +    +    +    
Sbjct: 2   TIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGV 61

Query: 89  PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEA 148
               +   TS   T  +L R++      +G   +                      + +A
Sbjct: 62  DVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALI-------------------HELYKA 102

Query: 149 DFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPG 208
            F +        +  G+ R  +   + K     A+    +      +     R      G
Sbjct: 103 GFTITDVNPDFVIV-GETRSYNWDMMHKAAYFVANGARFIATNPDTHG----RGFYPACG 157

Query: 209 TLASKFEKLGGEVRWMGKPDKIIYKSAMAM-VGVDACDSIAVGDSLHHDIKGANAAGIQS 267
            L +  EK+ G   +           A    +   + +++ VGD+L  DI     AG+++
Sbjct: 158 ALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLET 217

Query: 268 VFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS 312
           + ++ G+ + +                  +      PS++ PS +
Sbjct: 218 ILVLSGVSSLD-----------------DIDSMPFRPSWIYPSVA 245

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

 Score = 47.9 bits (112), Expect = 5e-07
 Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 4/93 (4%)

Query: 223 WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLD 282
            + KP    Y     ++GV   + + V  +   D+ GA   G     +            
Sbjct: 144 RVFKPHPDSYALVEEVLGVTPAEVLFVSSN-GFDVGGAKNFGFSVARVARLSQEALAREL 202

Query: 283 SYGEVADLSSVQTLVSKYD---AYPSYVLPSFS 312
             G +A L+  + L  + +     P +V+P+  
Sbjct: 203 VSGTIAPLTMFKALRMREETYAEAPDFVVPALG 235

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.5 bits (106), Expect = 2e-06
 Identities = 20/169 (11%), Positives = 44/169 (26%), Gaps = 4/169 (2%)

Query: 110 DDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPM 169
           +      +        W      S          N+ E   I         + +  +   
Sbjct: 44  EGPTEQLMKGKITFSQWVPLMDESYRKSSKACGANLPENFSISQI--FSQAMAARSINRP 101

Query: 170 SLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDK 229
            LQ    + +   +  I       D         ++M          +      M KP+ 
Sbjct: 102 MLQAAIALKKKGFTTCIVTNNWLDDGDKR-DSLAQMMCELSQHFDFLIESCQVGMIKPEP 160

Query: 230 IIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE 278
            IY   +  +     + + + D    ++K A   G+ ++ +     A  
Sbjct: 161 QIYNFLLDTLKAKPNEVVFLDDF-GSNLKPARDMGMVTILVHNTASALR 208

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 43.2 bits (100), Expect = 9e-06
 Identities = 9/57 (15%), Positives = 23/57 (40%), Gaps = 5/57 (8%)

Query: 223 WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATEL 279
               P+ ++Y        + +   + +GD    DI+   AAG+ +      ++  ++
Sbjct: 133 RKPNPESMLY--LREKYQISSG--LVIGDRPI-DIEAGQAAGLDTHLFTSIVNLRQV 184

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (101), Expect = 1e-05
 Identities = 11/120 (9%), Positives = 33/120 (27%), Gaps = 4/120 (3%)

Query: 174 LEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYK 233
           +  + +   +     + ++      +        G +    +          K +   Y+
Sbjct: 133 VPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGH-KVESESYR 191

Query: 234 SAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFII--GGIHATELGLDSYGEVADLS 291
                +G    + + + D    +   A  A +    ++  G    T+     Y  +   S
Sbjct: 192 KIADSIGCSTNNILFLTDVTR-EASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFS 250

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.9 bits (99), Expect = 2e-05
 Identities = 10/69 (14%), Positives = 23/69 (33%), Gaps = 1/69 (1%)

Query: 223 WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLD 282
              K +   Y + +  +G  A + + + D+   ++  A   GI +       +A      
Sbjct: 156 SGKKTETQSYANILRDIGAKASEVLFLSDNPL-ELDAAAGVGIATGLASRPGNAPVPDGQ 214

Query: 283 SYGEVADLS 291
            Y    +  
Sbjct: 215 KYQVYKNFE 223

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score = 42.9 bits (99), Expect = 2e-05
 Identities = 19/79 (24%), Positives = 34/79 (43%)

Query: 223 WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLD 282
              KP   I++ A+   GV   +++ VGD+   D  G+   G+ S+ +       E    
Sbjct: 152 GFFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDK 211

Query: 283 SYGEVADLSSVQTLVSKYD 301
               V+DL  V  +V + +
Sbjct: 212 CDFIVSDLREVIKIVDELN 230

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

 Score = 42.9 bits (100), Expect = 3e-05
 Identities = 25/160 (15%), Positives = 52/160 (32%), Gaps = 27/160 (16%)

Query: 145 VEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARAL- 203
            E+ +  +A  T   G    ++    + +++ +L         + +A     T       
Sbjct: 191 YEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFE 250

Query: 204 -----------RVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAM--------------AM 238
                       +   +   + E +  + R +GKP+   Y +A+                
Sbjct: 251 NLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQD 310

Query: 239 VGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE 278
             V+  D   VGDSL  D+  A   G   +  + G+   +
Sbjct: 311 NIVNKDDVFIVGDSLA-DLLSAQKIGATFIGTLTGLKGKD 349

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

 Score = 40.9 bits (94), Expect = 7e-05
 Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 1/92 (1%)

Query: 179 EICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAM 238
                +   +VV +              P    +       +   M KP+  IY+  +  
Sbjct: 94  HKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQA 153

Query: 239 VGVDACDSIAVGDSLHHDIKGANAAGIQSVFI 270
            G    D++   D+   +I+GAN  GI S+ +
Sbjct: 154 EGFSPSDTVFFDDNAD-NIEGANQLGITSILV 184

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} Length = 161

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

 Score = 39.5 bits (91), Expect = 1e-04
 Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 1/48 (2%)

Query: 223 WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFI 270
              KP   + +  +A   +D  +S  +GD    DI+ A   GI  +  
Sbjct: 101 DCRKPKVKLVERYLAEQAMDRANSYVIGDRAT-DIQLAENMGINGLRY 147

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 39.8 bits (91), Expect = 1e-04
 Identities = 10/68 (14%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 223 WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLD 282
           ++ KP        +    +++ ++  +GD    D++ A  +GIQS+  +   +     + 
Sbjct: 134 FVRKPSPEAATYLLDKYQLNSDNTYYIGDR-TLDVEFAQNSGIQSINFLESTYEGNHRIQ 192

Query: 283 SYGEVADL 290
           +  +++ +
Sbjct: 193 ALADISRI 200

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} Length = 209

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

 Score = 39.9 bits (92), Expect = 2e-04
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 7/78 (8%)

Query: 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELG----- 280
           KP+  +   A   + +D   S+ VGD L  D++    AG+   +++ G  A + G     
Sbjct: 129 KPNPGMLVEAGKRLALDLQRSLIVGDKLA-DMQAGKRAGLAQGWLVDGEAAVQPGFAIRP 187

Query: 281 LDSYGEVADLSS-VQTLV 297
           L    E+ DL + ++TL 
Sbjct: 188 LRDSSELGDLLAAIETLG 205

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.0 bits (90), Expect = 2e-04
 Identities = 15/116 (12%), Positives = 35/116 (30%), Gaps = 8/116 (6%)

Query: 173 DLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIY 232
           ++ ++L    S  +P+  A+                       K   +           +
Sbjct: 50  EVPEVLGRLQSLGVPVAAASRTS-----EIQGANQLLELFDLGKYFIQREIYPGSKVTHF 104

Query: 233 KSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATEL--GLDSYGE 286
           +      GV     +   D  + +I      G+  + I  G+    L  GL+++ +
Sbjct: 105 ERLHHKTGVPFSQMVFFDDE-NRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFAK 159

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

 Score = 39.8 bits (91), Expect = 2e-04
 Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 223 WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATEL 279
              KP   +Y    A +GVD    +A+ DS  + +  + AA ++S+ +       + 
Sbjct: 141 PYSKPHPQVYLDCAAKLGVDPLTCVALEDS-VNGMIASKAARMRSIVVPAPEAQNDP 196

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.7 bits (88), Expect = 4e-04
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 2/82 (2%)

Query: 223 WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLD 282
              KP   I+     ++GV   D + VGD+L  DI+G   AG+++   I       L   
Sbjct: 161 KEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSS 220

Query: 283 SYG--EVADLSSVQTLVSKYDA 302
                 V+ +  +  L+   D 
Sbjct: 221 PMPHYMVSSVLELPALLQSIDC 242

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (87), Expect = 6e-04
 Identities = 15/109 (13%), Positives = 37/109 (33%), Gaps = 4/109 (3%)

Query: 173 DLEKILEICASKKIPMVVANPDYVTVEARALRVMP--GTLASKFEK-LGGEVRWMGKPDK 229
            + +   +   K     +    ++   A    +      L   F+  +      M KP+ 
Sbjct: 103 PMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEP 162

Query: 230 IIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE 278
            IYK  +  +     + + + D    ++K A   G+ ++ +     A +
Sbjct: 163 QIYKFLLDTLKASPSEVVFLDDI-GANLKPARDLGMVTILVQDTDTALK 210

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

 Score = 37.1 bits (84), Expect = 0.001
 Identities = 12/56 (21%), Positives = 19/56 (33%), Gaps = 3/56 (5%)

Query: 223 WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE 278
               PD  I       VGV   +SI + DS    I+    +G   + +       +
Sbjct: 144 SKPAPDIFIAA--AHAVGVAPSESIGLEDS-QAGIQAIKDSGALPIGVGRPEDLGD 196

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	313
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	100.0
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	100.0
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	100.0
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	100.0
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.82
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.81
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.81
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.79
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.79
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.79
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.77
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	99.77
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.77
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	99.77
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.76
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.76
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.75
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.72
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.72
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.71
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.71
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.71
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.71
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.7
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.69
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.62
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	99.6
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	99.59
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	99.54
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	99.51
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	99.45
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	99.43
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	99.41
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	99.4
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	99.37
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	99.34
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	99.28
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	99.28
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	99.21
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.14
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	99.13
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	99.12
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	98.97
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	98.96
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	98.84
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	98.75
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	98.7
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	98.64
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	98.61
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	98.08
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	97.95
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	97.78
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	97.47
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	97.04
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	94.41
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	91.81
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	90.85
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	90.44
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	90.33
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	90.2
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	90.01
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	89.5
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	89.06
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	87.43
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	87.07
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	83.81
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	83.35
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	80.8

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=100.00  E-value=1.1e-37  Score=273.92  Aligned_cols=246  Identities=21%  Similarity=0.312  Sum_probs=197.7

Q ss_pred             CccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCC-CCchHHHHHHH-hCCCCCcccccccchHHHHHHHH
Q 021350           29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLK-SLGFDPSLFAGAITSGELTHQYL  106 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~-~~~~~~~~~l~-~~G~~~~~~~~ii~~~~~~~~~l  106 (313)
                      +||+|+||+||||+++.+++|+|.+++++|++.|++++++||++ ++.+.+.+.+. .+|++... +.++++..++.+++
T Consensus         1 tyk~vlFDlDGTL~~~~~~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l~~~~~~~~~~-~~i~~~~~~~~~~l   79 (253)
T d1wvia_           1 TYKGYLIDLDGTIYKGKDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNIKTPL-ETIYTATLATIDYM   79 (253)
T ss_dssp             CCCEEEEECBTTTEETTEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHHHHSCCCCG-GGEEEHHHHHHHHH
T ss_pred             CcCEEEEcCcCceEECCCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHhhcCccccc-cccccHHHHHHHHH
Confidence            58999999999999999999999999999999999999999966 55567888885 57888777 89999999999999


Q ss_pred             HhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCC
Q 021350          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKI  186 (313)
Q Consensus       107 ~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~  186 (313)
                      ++...      +.+++.+.. ......+.+.+.....  +.+...+.          +.+..+++........ +.+.+.
T Consensus        80 ~~~~~------~~~~~~~~~-~~l~~~~~~~~~~~~~--~~~~~~~~----------~~~~~~~~~~~~~~~~-~~~~~~  139 (253)
T d1wvia_          80 NDMKR------GKTAYVIGE-TGLKKAVAEAGYREDS--ENPAYVVV----------GLDTNLTYEKLTLATL-AIQKGA  139 (253)
T ss_dssp             HHHCC------CSEEEEESC-HHHHHHHHHTTCEECS--SSCSEEEE----------CCCTTCBHHHHHHHHH-HHHTTC
T ss_pred             HHhcc------Cceeeeccc-hHHHHHHHHcCCcccc--cccceEEE----------ecCCCcCHHHHHHHhh-hhhhcc
Confidence            87763      455554432 2223356666664433  45555555          2345566665555543 345677


Q ss_pred             cEEEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCC
Q 021350          187 PMVVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGI  265 (313)
Q Consensus       187 ~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~  265 (313)
                      ++++||++..++....+..+.+.+...++. .+.++..+|||+|.+|+.+++++|++|++|+||||++.+||++|+++|+
T Consensus       140 ~~i~tn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~  219 (253)
T d1wvia_         140 VFIGTNPDLNIPTERGLLPGAGAILFLLEKATRVKPIIIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDI  219 (253)
T ss_dssp             EEEESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTC
T ss_pred             ccccCCCCceeEcCCcccccCCcchhcccccccceeEEeccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCC
Confidence            889999999888877777777888887776 5888999999999999999999999999999999999789999999999


Q ss_pred             cEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350          266 QSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS  312 (313)
Q Consensus       266 ~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  312 (313)
                      ++|+|+||.++.++                 +.....+|||+++||+
T Consensus       220 ~si~V~~G~~~~~~-----------------~~~~~~~PD~vi~sl~  249 (253)
T d1wvia_         220 ATLLVTTGFTKPEE-----------------VPALPIQPDFVLSSLA  249 (253)
T ss_dssp             EEEEESSSSSCTTT-----------------GGGCSSCCSEEESCGG
T ss_pred             CEEEECCCCCCHHH-----------------HhhcCCCCCEEECCHH
Confidence            99999999987776                 4456679999999987

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.1e-36  Score=265.28  Aligned_cols=243  Identities=22%  Similarity=0.368  Sum_probs=191.9

Q ss_pred             cCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCC-CCchHHHHHHHhCCCCCcccccccchHHHHHHHH
Q 021350           28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAGAITSGELTHQYL  106 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~-~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l  106 (313)
                      |++|+|+||+||||+++.+++|++.++|+.|++.|++++++||++ ++++++.++++++|++.+. ++|+++.....+++
T Consensus         1 M~ik~VifDlDGTL~~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~~-~~i~~~~~~~~~~l   79 (250)
T d2c4na1           1 MTIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPD-SVFYTSAMATADFL   79 (250)
T ss_dssp             CCCCEEEEECBTTTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCCG-GGEEEHHHHHHHHH
T ss_pred             CCCCEEEEECCCeeEECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccccccc-eeEechHHHHHHHH
Confidence            789999999999999999999999999999999999999999965 6668999999999999888 89999999998999


Q ss_pred             HhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCC
Q 021350          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKI  186 (313)
Q Consensus       107 ~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~  186 (313)
                      .+..       ++++++++... ....+.+.......  ..+...+.          +....+.+....+++.. ...+.
T Consensus        80 ~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~v~----------~~~~~~~~~~~~~~~~~-~~~~~  138 (250)
T d2c4na1          80 RRQE-------GKKAYVVGEGA-LIHELYKAGFTITD--VNPDFVIV----------GETRSYNWDMMHKAAYF-VANGA  138 (250)
T ss_dssp             HTSS-------CCEEEEECCTH-HHHHHHHTTCEECS--SSCSEEEE----------CCCTTCCHHHHHHHHHH-HHTTC
T ss_pred             Hhhh-------cccccccCCHH-HHHHHHHhhhhccc--cccceeec----------cCCcccchHHHHHHHHH-Hhccc
Confidence            8777       67777654332 23345544444333  23333333          12355666666666544 45666


Q ss_pred             cEEEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCC
Q 021350          187 PMVVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGI  265 (313)
Q Consensus       187 ~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~  265 (313)
                      .+++++++....   ...++.|.+...++. .+......+||+|.+|+.+++++|++|++|+||||++.+||++|+++|+
T Consensus       139 ~~~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~  215 (250)
T d2c4na1         139 RFIATNPDTHGR---GFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGL  215 (250)
T ss_dssp             EEEESCCCSBSS---TTCBCHHHHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTC
T ss_pred             cccccccccccC---ceeecCcchHHHHHHhhcccchhcccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCC
Confidence            678888776332   234566778888876 4778889999999999999999999999999999998789999999999


Q ss_pred             cEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350          266 QSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS  312 (313)
Q Consensus       266 ~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  312 (313)
                      ++|+|+||.++.++                 +.....+|||+++||.
T Consensus       216 ~tilV~~G~~~~~~-----------------l~~~~~~pd~i~~sl~  245 (250)
T d2c4na1         216 ETILVLSGVSSLDD-----------------IDSMPFRPSWIYPSVA  245 (250)
T ss_dssp             EEEEESSSSCCGGG-----------------GSSCSSCCSEEESSGG
T ss_pred             CEEEECCCCCCHHH-----------------HHhCCCCCCEEECCHH
Confidence            99999999988776                 3345578999999985

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=100.00  E-value=4.3e-36  Score=263.60  Aligned_cols=247  Identities=22%  Similarity=0.347  Sum_probs=196.4

Q ss_pred             CccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCC-CCchHHHHHHH-hCCCCCcccccccchHHHHHHHH
Q 021350           29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLK-SLGFDPSLFAGAITSGELTHQYL  106 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~-~~~~~~~~~l~-~~G~~~~~~~~ii~~~~~~~~~l  106 (313)
                      .||+|+||+||||+++.+.+|++.++|++|++.|++++++||++ ++.+++.++|. .+|+.... +.++++..+...++
T Consensus         1 ~yk~v~fDlDGTL~~~~~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L~~~~~~~~~~-~~i~~~~~~~~~~l   79 (253)
T d1yv9a1           1 DYQGYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPA-SLVYTATLATIDYM   79 (253)
T ss_dssp             SCCEEEECCBTTTEETTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCG-GGEEEHHHHHHHHH
T ss_pred             CCCEEEEcCCCccEeCCCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHHhcCCcccc-ccccCHHHHHHHHH
Confidence            48999999999999999999999999999999999999999855 66678888775 57888777 89999999999998


Q ss_pred             HhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCC
Q 021350          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKI  186 (313)
Q Consensus       107 ~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~  186 (313)
                      ++...      ..+++.... ..........+.....  .+++.++.          +.+..++++.+...... ...+.
T Consensus        80 ~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~----------~~~~~~~~~~~~~~~~~-~~~~~  139 (253)
T d1yv9a1          80 KEANR------GKKVFVIGE-AGLIDLILEAGFEWDE--TNPDYVVV----------GLDTELSYEKVVLATLA-IQKGA  139 (253)
T ss_dssp             HHHCC------CSEEEEESC-HHHHHHHHHTTCEECS--SSCSEEEE----------CCCTTCCHHHHHHHHHH-HHTTC
T ss_pred             HhccC------CCeEEeccc-chhhhhhhhhcccccc--cCcceEEE----------eccCcccHHHhhhhhhh-hcccc
Confidence            87542      344443322 1212234444544433  45666655          23466778776666544 34667


Q ss_pred             cEEEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCC
Q 021350          187 PMVVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGI  265 (313)
Q Consensus       187 ~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~  265 (313)
                      .++++|+|..++..+....+.+.+...++. .+.++...|||+|.+|+++++++|++|++|+||||++.+||.||+++|+
T Consensus       140 ~~i~~n~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~  219 (253)
T d1yv9a1         140 LFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGI  219 (253)
T ss_dssp             EEEESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTC
T ss_pred             ceeeecCCccccccCceeeecccccccccccccceeeeecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCC
Confidence            779999999888777666777788888886 5889999999999999999999999999999999998789999999999


Q ss_pred             cEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc-C
Q 021350          266 QSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS-W  313 (313)
Q Consensus       266 ~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~-~  313 (313)
                      ++++|.+|.+..++                 +.+...+|||+++||+ |
T Consensus       220 ~si~V~~G~~~~~~-----------------~~~~~~~Pd~vi~sl~e~  251 (253)
T d1yv9a1         220 DSLLVTSGFTPKSA-----------------VPTLPTPPTYVVDSLDEW  251 (253)
T ss_dssp             EEEEETTSSSCSSS-----------------TTTCSSCCSEEESSGGGC
T ss_pred             CEEEECCCCCCHHH-----------------HHhcCCCCCEEECCHHHc
Confidence            99999999987665                 3346678999999998 5

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.2e-36  Score=266.46  Aligned_cols=250  Identities=23%  Similarity=0.354  Sum_probs=199.1

Q ss_pred             HhhhhcCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCC-CCchHHHHHHHhCCCCCcccccccchHHH
Q 021350           23 HIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAGAITSGEL  101 (313)
Q Consensus        23 ~~~~~~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~-~~~~~~~~~l~~~G~~~~~~~~ii~~~~~  101 (313)
                      ++++  +||+|+||+||||+++.+.+|+|.+++++|+++|++++++||++ ++..++.+.++.+|++... +++++++..
T Consensus         2 ~~~~--~ik~vlFDlDGTL~~~~~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~~~~-~~v~ts~~~   78 (261)
T d1vjra_           2 HVLD--KIELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPD-DAVVTSGEI   78 (261)
T ss_dssp             CGGG--GCCEEEECCBTTTEETTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCG-GGEEEHHHH
T ss_pred             chHH--hCCEEEEeCCCeeEECCccCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhcccccc-ceeccHHHH
Confidence            4677  99999999999999999999999999999999999999999955 6667899999999999888 899999999


Q ss_pred             HHHHHHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 021350          102 THQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEIC  181 (313)
Q Consensus       102 ~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  181 (313)
                      ...++.+...      +.++++++ .......+.+.+.....  ++...++.          +.+..+.+......+. +
T Consensus        79 ~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~----------~~~~~~~~~~~~~~~~-~  138 (261)
T d1vjra_          79 TAEHMLKRFG------RCRIFLLG-TPQLKKVFEAYGHVIDE--ENPDFVVL----------GFDKTLTYERLKKACI-L  138 (261)
T ss_dssp             HHHHHHHHHC------SCEEEEES-CHHHHHHHHHTTCEECS--SSCSEEEE----------CCCTTCCHHHHHHHHH-H
T ss_pred             HHHHHHHhcC------CceEEEec-ccchhHHHHhcCcccch--hhcceeEe----------cCCcccchHHHHHHHH-H
Confidence            8888876542      34544433 22334466777765543  44444444          2345666766666553 4


Q ss_pred             HhCCCcEEEEcCCccccccchhccCCchHHHHHHH-hcCc-eeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHH
Q 021350          182 ASKKIPMVVANPDYVTVEARALRVMPGTLASKFEK-LGGE-VRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKG  259 (313)
Q Consensus       182 ~~~g~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~-~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~  259 (313)
                      .+.+..++++++|..++.......+.+.+...+.. .+.. ....+||+|.+|..+++++|++|++|+||||++++||.+
T Consensus       139 ~~~~~~~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~g  218 (261)
T d1vjra_         139 LRKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKL  218 (261)
T ss_dssp             HTTTCEEEESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHH
T ss_pred             hhcCcceecccCCccccCCCCcccccchhhHHHhhhcccccccccCCCcHHHHHHHHhhhccCchhcceecCChhHHHHH
Confidence            56777789999999888777666667777776665 4554 456799999999999999999999999999998789999


Q ss_pred             HHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350          260 ANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS  312 (313)
Q Consensus       260 a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  312 (313)
                      |+++|+++|||+||.++.++                 +......|||++++|+
T Consensus       219 a~~aG~~si~V~~G~~~~~~-----------------~~~~~~~PD~ii~~l~  254 (261)
T d1vjra_         219 GKNAGIVSILVLTGETTPED-----------------LERAETKPDFVFKNLG  254 (261)
T ss_dssp             HHHHTCEEEEESSSSCCHHH-----------------HHHCSSCCSEEESSHH
T ss_pred             HHHCCCcEEEECCCCCCHHH-----------------HhhcCCCCCEEECCHH
Confidence            99999999999999987765                 4456689999999874

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.82  E-value=2.1e-22  Score=169.90  Aligned_cols=105  Identities=17%  Similarity=0.252  Sum_probs=79.3

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++|+.+++ +.++ ++||.........   +..-.+...++. .+......+||+|.+|+.+++++|++|++|+|
T Consensus        84 ~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~---l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~  159 (207)
T d2hdoa1          84 YPGITSLFEQLPS-ELRLGIVTSQRRNELESG---MRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALF  159 (207)
T ss_dssp             CTTHHHHHHHSCT-TSEEEEECSSCHHHHHHH---HTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred             ccchhhhhhhhcc-cccccccccccccccccc---cccccccccccccccccccccchhhhhhhcccccceeeeccceeE
Confidence            4688889988864 5676 8888654322211   111122233333 24455678999999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCCccc
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHATELG  280 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~  280 (313)
                      |||+. +|+.+|+++|+.+|+|.+|....++.
T Consensus       160 VgDs~-~Di~~a~~aG~~~i~v~~g~~~~~~~  190 (207)
T d2hdoa1         160 IGDSV-SDEQTAQAANVDFGLAVWGMDPNADH  190 (207)
T ss_dssp             EESSH-HHHHHHHHHTCEEEEEGGGCCTTGGG
T ss_pred             ecCCH-HHHHHHHHcCCeEEEEecCCCChhHh
Confidence            99996 99999999999999999998877653

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.81  E-value=3e-20  Score=156.45  Aligned_cols=110  Identities=18%  Similarity=0.177  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHHHhCCCcEEEEcCCccccccchhccCCchHHHHHHHhcC--------ceeecCCCCHHHHHHHHHHhCCC
Q 021350          171 LQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGG--------EVRWMGKPDKIIYKSAMAMVGVD  242 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~--------~~~~~gKP~~~~~~~~~~~lgv~  242 (313)
                      ++++.+.+..++.++...++||......            ...++.++.        .....+||+|+.|..+++++|++
T Consensus        86 ~~~~~~~l~~l~~~~~~~i~t~~~~~~~------------~~~l~~~gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~  153 (210)
T d2ah5a1          86 FPQIIDLLEELSSSYPLYITTTKDTSTA------------QDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLA  153 (210)
T ss_dssp             CTTHHHHHHHHHTTSCEEEEEEEEHHHH------------HHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCC
T ss_pred             hhHHHHHHhhhhcccchhhcccccchhh------------hHHHHhhcccccccccccccccccccccccchhhhhhhcc
Confidence            4678888888877765458887544221            122222221        12336899999999999999999


Q ss_pred             CCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350          243 ACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS  312 (313)
Q Consensus       243 ~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  312 (313)
                      |++|+||||+. +|+.+|+++|+++|+|.+|.+..++                 +.  ...|+|++++|+
T Consensus       154 ~~~~v~VGDs~-~Di~aa~~aGi~~i~v~~g~~~~~~-----------------l~--~~~pd~vi~~l~  203 (210)
T d2ah5a1         154 PEQAIIIGDTK-FDMLGARETGIQKLAITWGFGEQAD-----------------LL--NYQPDYIAHKPL  203 (210)
T ss_dssp             GGGEEEEESSH-HHHHHHHHHTCEEEEESSSSSCHHH-----------------HH--TTCCSEEESSTT
T ss_pred             cccceeecCCH-HHHHHHHHcCCeEEEEcCCCCCHHH-----------------HH--hCCCCEEECCHH
Confidence            99999999995 9999999999999999999876654                 22  257999998875

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.81  E-value=1e-20  Score=160.28  Aligned_cols=119  Identities=22%  Similarity=0.253  Sum_probs=90.0

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.+.+..|+++|+++ ++||............+   .+...++. .+.......||+|..|..+++++++++++|+|
T Consensus        97 ~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~---gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~  173 (224)
T d2hsza1          97 YPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAF---GIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILF  173 (224)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT---TCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             HHHHHHHHHHHhccCCcccccccccHHHHHHHHHhc---CchhhccccccccccccccccchhhHHHHHHhhhhhhccch
Confidence            578999999999999998 78886653221111011   12222332 24455678899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS  312 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  312 (313)
                      |||+. +|+.+|+++|+.+|+|.+|..+...+                 .  ...|+|++++|+
T Consensus       174 igD~~-~Di~~A~~aG~~~i~v~~g~~~~~~l-----------------~--~~~~d~~v~~l~  217 (224)
T d2hsza1         174 VGDSQ-NDIFAAHSAGCAVVGLTYGYNYNIPI-----------------A--QSKPDWIFDDFA  217 (224)
T ss_dssp             EESSH-HHHHHHHHHTCEEEEESSSCSTTCCG-----------------G--GGCCSEEESSGG
T ss_pred             hcCcH-HHHHHHHHcCCeEEEEeCCCCCcchh-----------------h--hcCCCEEECCHH
Confidence            99995 99999999999999999998776652                 2  247888888764

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.79  E-value=1.4e-20  Score=159.41  Aligned_cols=104  Identities=18%  Similarity=0.313  Sum_probs=79.6

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.+++..|+++|+++ ++||............+   .+...|+. ++.+....+||+|+.|+.+++++|++|++|+|
T Consensus        90 ~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~---~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~  166 (218)
T d1te2a_          90 LPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMF---DLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVA  166 (218)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEE
T ss_pred             cchHHHHHHHhhhccccccccccccccccccccccc---cccccccccccccccccchhhHHHHHHHHHHcCCCchhcEE
Confidence            478999999999999999 88986553322111111   22233333 34556678999999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      |||+. +|+.+|+++|+.+|+|..+.....
T Consensus       167 igD~~-~di~aA~~~G~~~i~v~~~~~~~~  195 (218)
T d1te2a_         167 LEDSV-NGMIASKAARMRSIVVPAPEAQND  195 (218)
T ss_dssp             EESSH-HHHHHHHHTTCEEEECCCTTTTTC
T ss_pred             EeeCH-HHHHHHHHcCCEEEEECCCCCccc
Confidence            99996 999999999999999977655433

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.79  E-value=8.3e-21  Score=163.88  Aligned_cols=102  Identities=25%  Similarity=0.363  Sum_probs=74.8

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.++|+.|+ ++.++ ++||.+...........   .+...++. +.......+||+|.+|+.+++++|++|++|+
T Consensus       110 ~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~---gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~l  185 (247)
T d2gfha1         110 LADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEAC---ACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCV  185 (247)
T ss_dssp             CCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHH---TCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             cCccHHHHHHHhh-cccceEEeecccchhhhhhhhhc---cccccccccccccccccchhhhhhHHHHHHHhhcCHHhcc
Confidence            4689999999987 46777 88997654322211111   12222332 2344567889999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      ||||++.+||.+|+++|+.++++.++..
T Consensus       186 ~iGD~~~~Di~~A~~~G~~~~~~~~~~~  213 (247)
T d2gfha1         186 MVGDTLETDIQGGLNAGLKATVWINKSG  213 (247)
T ss_dssp             EEESCTTTHHHHHHHTTCSEEEEECTTC
T ss_pred             eeccChHhHHHHHHHcCCeEEEEECCCC
Confidence            9999987899999999998776655433

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.79  E-value=1.3e-19  Score=157.41  Aligned_cols=103  Identities=17%  Similarity=0.208  Sum_probs=76.4

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHH-HH-hcCceeecCCCCHHHHHHHHHHhCCC-CCc
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKF-EK-LGGEVRWMGKPDKIIYKSAMAMVGVD-ACD  245 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~-~~-~~~~~~~~gKP~~~~~~~~~~~lgv~-~~~  245 (313)
                      .++++.++|..|+++|+++ ++||.+........   ..-.+...+ +. +.+.....+||+|+.|..+++++|+. +++
T Consensus       100 ~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l---~~~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~  176 (257)
T d1swva_         100 PINGVKEVIASLRERGIKIGSTTGYTREMMDIVA---KEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNH  176 (257)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHH---HHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGG
T ss_pred             cCCcHHHHHHHHHhcccceeecCCCchhhHHHHH---HHHhhcccccccccccccccccccChHHHHHHHHHhCCCCcce
Confidence            3589999999999999999 88886642221110   000111111 11 23344567899999999999999994 599


Q ss_pred             EEEEcCCchhhHHHHHHcCCcEEEEcCCCCC
Q 021350          246 SIAVGDSLHHDIKGANAAGIQSVFIIGGIHA  276 (313)
Q Consensus       246 ~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~  276 (313)
                      |+||||+. +||.+|+++|+.+|+|.||...
T Consensus       177 ~v~VgDs~-~Di~aA~~aG~~ti~v~~G~~~  206 (257)
T d1swva_         177 MIKVGDTV-SDMKEGRNAGMWTVGVILGSSE  206 (257)
T ss_dssp             EEEEESSH-HHHHHHHHTTSEEEEECTTCTT
T ss_pred             EEEEeCCh-hhHHHHHHCCCEEEEEccCCCC
Confidence            99999996 9999999999999999999763

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=4.4e-19  Score=144.43  Aligned_cols=49  Identities=14%  Similarity=0.227  Sum_probs=47.3

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      ||+|..|..+++++|++|++|+||||+. .|+++|+++|+.+|+|.+|.+
T Consensus        98 kp~~~~~~~~~~~~~~~~~~~l~igD~~-~di~aA~~aG~~~i~v~~G~~  146 (164)
T d1u7pa_          98 GSKVTHFERLHHKTGVPFSQMVFFDDEN-RNIIDVGRLGVTCIHIRDGMS  146 (164)
T ss_dssp             SCHHHHHHHHHHHHCCCGGGEEEEESCH-HHHHHHHTTTCEEEECSSCCC
T ss_pred             CCChHHHHHHHHHhCCChHHEEEEcCCH-HHHHHHHHcCCEEEEECCCCC
Confidence            8999999999999999999999999996 999999999999999999974

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=9.6e-19  Score=144.89  Aligned_cols=55  Identities=31%  Similarity=0.349  Sum_probs=48.9

Q ss_pred             ecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcE-EEEcCCCCCCc
Q 021350          223 WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQS-VFIIGGIHATE  278 (313)
Q Consensus       223 ~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~-i~V~~G~~~~~  278 (313)
                      ...||+|.++..+++++++++++++||||+. +||++|++||+.+ ++|.+|.+..+
T Consensus       105 ~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~-~Di~aA~~Ag~~~~~lv~~g~~~~~  160 (182)
T d2gmwa1         105 DCRKPHPGMLLSARDYLHIDMAASYMVGDKL-EDMQAAVAANVGTKVLVRTGKPITP  160 (182)
T ss_dssp             SSSTTSCHHHHHHHHHHTBCGGGCEEEESSH-HHHHHHHHTTCSEEEEESSSSCCCH
T ss_pred             cccCCccccccchhhhcccccccccccCCCH-HHHHHHHHhCCCcEEEECCCCCCCc
Confidence            4569999999999999999999999999996 9999999999965 77888866544

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.77  E-value=1.5e-19  Score=154.26  Aligned_cols=119  Identities=13%  Similarity=0.181  Sum_probs=84.5

Q ss_pred             HHHHHHHHHHHHhCC-CcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHh---CCCCC
Q 021350          171 LQDLEKILEICASKK-IPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMV---GVDAC  244 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g-~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~l---gv~~~  244 (313)
                      ++++.++|+.++++| +++ ++||.........   +....+...|+. .+.......||.|..+...++.+   +++|+
T Consensus        93 ~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~---l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~p~  169 (228)
T d2hcfa1          93 LEGVRELLDALSSRSDVLLGLLTGNFEASGRHK---LKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPS  169 (228)
T ss_dssp             CTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHH---HHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGG
T ss_pred             cCchHHHHhhhhccccccccccCCCcchhhhhh---hhhhcccccccccccccccccccchhHHHHHHhhhhcccCCChh
Confidence            468899999998887 777 7888655322111   111111122222 13334556799999877776665   89999


Q ss_pred             cEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350          245 DSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS  312 (313)
Q Consensus       245 ~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  312 (313)
                      +|+||||++ +|+.+|+++|+++|+|.+|.+..++                 +.+  ..|+|++++|+
T Consensus       170 ~~l~VGD~~-~Di~aA~~aG~~~i~v~~g~~~~~~-----------------l~~--~~ad~vi~~~~  217 (228)
T d2hcfa1         170 QIVIIGDTE-HDIRCARELDARSIAVATGNFTMEE-----------------LAR--HKPGTLFKNFA  217 (228)
T ss_dssp             GEEEEESSH-HHHHHHHTTTCEEEEECCSSSCHHH-----------------HHT--TCCSEEESCSC
T ss_pred             HheeecCCh-HHHHHHHHcCCEEEEEcCCCCCHHH-----------------Hhh--CCCCEEECCHH
Confidence            999999997 9999999999999999999887654                 322  46899988874

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=99.77  E-value=4.4e-19  Score=150.10  Aligned_cols=54  Identities=28%  Similarity=0.441  Sum_probs=50.2

Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       224 ~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      ..||+|.++..+++++++++++|+||||+. +||++|++||+.+++|.+|....+
T Consensus       127 ~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~-~Di~aA~~AGi~~i~v~~g~~~~~  180 (209)
T d2o2xa1         127 MRKPNPGMLVEAGKRLALDLQRSLIVGDKL-ADMQAGKRAGLAQGWLVDGEAAVQ  180 (209)
T ss_dssp             TSTTSCHHHHHHHHHHTCCGGGCEEEESSH-HHHHHHHHTTCSEEEEETCCCEEE
T ss_pred             cccccchhhhHhHHHhCCCccceEEeCCCH-HHHHHHHHCCCcEEEEeCCCCccc
Confidence            459999999999999999999999999995 999999999999999999977554

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.76  E-value=8.8e-21  Score=160.62  Aligned_cols=103  Identities=19%  Similarity=0.279  Sum_probs=76.6

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.+.+..++++++++ ++||.+.......   +....+...++. +.......+||+|+.|+.+++++|++|++|+|
T Consensus        95 ~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~---~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~l~  171 (220)
T d1zrna_          95 FSEVPDSLRELKRRGLKLAILSNGSPQSIDAV---VSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILF  171 (220)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHH---HHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEE
T ss_pred             cchhHHHHHHHHhcCCeEEeecchHHHHHHHH---HhhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCceEEE
Confidence            467788888999999988 7888654322111   111111222332 24455678999999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHAT  277 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~  277 (313)
                      |||+. .||.+|+++|+.+++|.++....
T Consensus       172 VgD~~-~Di~~A~~aG~~~v~v~r~~~~~  199 (220)
T d1zrna_         172 VASNA-WDATGARYFGFPTCWINRTGNVF  199 (220)
T ss_dssp             EESCH-HHHHHHHHHTCCEEEECTTCCCC
T ss_pred             EecCh-HhHHHHHHcCCEEEEEcCCCCCc
Confidence            99997 89999999999999998654433

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=8e-19  Score=142.45  Aligned_cols=52  Identities=23%  Similarity=0.260  Sum_probs=44.1

Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCC
Q 021350          224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHA  276 (313)
Q Consensus       224 ~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~  276 (313)
                      ..||+|.+++.+++++|++|++|+||||+. +|+++|+++|+++++|.++...
T Consensus       102 ~~KP~p~~~~~~~~~~~id~~~~~~IGD~~-~Di~aA~~aG~~~i~i~~~~~~  153 (161)
T d2fpwa1         102 CRKPKVKLVERYLAEQAMDRANSYVIGDRA-TDIQLAENMGINGLRYDRETLN  153 (161)
T ss_dssp             SSTTSSGGGGGGC----CCGGGCEEEESSH-HHHHHHHHHTSEEEECBTTTBC
T ss_pred             ccccccHHHHHHHHhcCCChhcEEEECCCH-HHHHHHHHcCCeEEEECCCCCC
Confidence            349999999999999999999999999996 9999999999999999887543

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.75  E-value=3.7e-20  Score=155.34  Aligned_cols=103  Identities=15%  Similarity=0.187  Sum_probs=78.3

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++|..|+++|+++ ++||.....  ...  +..-.+...++. ++.......||+|++|+.+++++|++|++|+|
T Consensus        84 ~pgv~~~L~~L~~~g~~~~v~Sn~~~~~--~~~--l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~l~  159 (204)
T d2go7a1          84 MPGAREVLAWADESGIQQFIYTHKGNNA--FTI--LKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYY  159 (204)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCTHH--HHH--HHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             cchHHhhhhcccccccchhhhcccchhh--hhh--hhhcccccccccccccccccccchhHHHHHHHHHHhCCCCceEEE
Confidence            589999999999999999 788854421  111  111112222332 24455678899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      |||+. +|+.+|+++|+++|+|.+|.+...
T Consensus       160 VgD~~-~Di~~A~~~G~~~i~v~~~~~~~~  188 (204)
T d2go7a1         160 IGDRT-LDVEFAQNSGIQSINFLESTYEGN  188 (204)
T ss_dssp             EESSH-HHHHHHHHHTCEEEESSCCSCTTE
T ss_pred             EeCCH-HHHHHHHHcCCeEEEEcCCCCCcC
Confidence            99995 999999999999999999865443

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=4.4e-19  Score=151.91  Aligned_cols=103  Identities=9%  Similarity=0.081  Sum_probs=75.9

Q ss_pred             CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHh--cCceeecCCCCHHHHHHHHHHhCCCCCc
Q 021350          169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL--GGEVRWMGKPDKIIYKSAMAMVGVDACD  245 (313)
Q Consensus       169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~gKP~~~~~~~~~~~lgv~~~~  245 (313)
                      ..++++.+.+..++++|+++ ++||.............+.+.   .+...  ..+....+||+|.+|+.+++++|++|++
T Consensus       127 ~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~~  203 (253)
T d1zs9a1         127 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGD---ILELVDGHFDTKIGHKVESESYRKIADSIGCSTNN  203 (253)
T ss_dssp             CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBC---CGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGG
T ss_pred             ccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcch---hhhhcceeeccccccCCCcHHHHHHHHHhCCCcCc
Confidence            34689999999999999999 889976533221111111111   11111  1123456899999999999999999999


Q ss_pred             EEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          246 SIAVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       246 ~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      |+||||+. +|+.+|+++|+++|+|.++..
T Consensus       204 ~l~vgD~~-~dv~aA~~aG~~ti~v~r~g~  232 (253)
T d1zs9a1         204 ILFLTDVT-REASAAEEADVHVAVVVRPGN  232 (253)
T ss_dssp             EEEEESCH-HHHHHHHHTTCEEEEECCTTC
T ss_pred             EEEEeCCH-HHHHHHHHcCCEEEEEeCCCC
Confidence            99999996 999999999999999987433

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.72  E-value=1.5e-18  Score=148.98  Aligned_cols=136  Identities=17%  Similarity=0.235  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++|..++  +..+ ++||............   ..+...++. +........||+|++|+.+++++|++|++|+|
T Consensus        95 ~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~---~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l~  169 (245)
T d1qq5a_          95 YPDAAQCLAELA--PLKRAILSNGAPDMLQALVAN---AGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF  169 (245)
T ss_dssp             CTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHH---TTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred             chhhhHHHHHHh--hhceeEEeccchHHHHHHHhh---cccccccccccccccccccCccHHHHHHHHHHhCCChhhEEE
Confidence            466777777663  5555 6777554322111000   111122222 23345567899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCcc---chhhHHHHHhhcCCCCcEEecCCc
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVA---DLSSVQTLVSKYDAYPSYVLPSFS  312 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~l~  312 (313)
                      |||+. +||.+|+++|+++|+|.+................   ...............|||++++|.
T Consensus       170 VgD~~-~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~  235 (245)
T d1qq5a_         170 VSSNG-FDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALG  235 (245)
T ss_dssp             EESCH-HHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGG
T ss_pred             EeCCH-HHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECCHH
Confidence            99996 9999999999999999864321111000011111   111122222333568999999884

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.71  E-value=8.7e-18  Score=142.27  Aligned_cols=55  Identities=33%  Similarity=0.412  Sum_probs=50.6

Q ss_pred             ecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          223 WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       223 ~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      ...||+|+.|..+++++|++|++|+||||+. .|+.+|+++|+.+|+|.+|.....
T Consensus       138 ~~~KP~~~~~~~~~~~l~~~p~~~l~vgDs~-~dv~aA~~aG~~~i~v~~~~~~~~  192 (222)
T d2fdra1         138 DRVKPKPDIFLHGAAQFGVSPDRVVVVEDSV-HGIHGARAAGMRVIGFTGASHTYP  192 (222)
T ss_dssp             TCCTTSSHHHHHHHHHHTCCGGGEEEEESSH-HHHHHHHHTTCEEEEECCSTTCCT
T ss_pred             cccccCHHHHHHHHHhhCCCCceEEEEcCCH-HHHHHHHHcCCEEEEEccCCCCCc
Confidence            3569999999999999999999999999996 999999999999999999976543

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.71  E-value=3.8e-19  Score=147.51  Aligned_cols=100  Identities=14%  Similarity=0.215  Sum_probs=74.0

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      .++++.+.|..++++|.++ ++||...... .....+   .+...++. ++.......||+|+.|+.+++++++  ++|+
T Consensus        80 ~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~---~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~--~~~l  153 (187)
T d2fi1a1          80 LFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKT---SIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI--SSGL  153 (187)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHT---TCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC--SSEE
T ss_pred             ccchhHHHHHHHHhhhccccccccCccchh-hhhhhh---ccccccccccccccccccCCCHHHHHHHHHHcCC--CCeE
Confidence            3578899999999999998 7888554221 111011   12223333 3445567789999999999999986  5699


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCCC
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIHA  276 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~  276 (313)
                      ||||+. .|+.+|+++|+++++|+++...
T Consensus       154 ~vgDs~-~Di~aA~~aG~~~i~v~~~~~~  181 (187)
T d2fi1a1         154 VIGDRP-IDIEAGQAAGLDTHLFTSIVNL  181 (187)
T ss_dssp             EEESSH-HHHHHHHHTTCEEEECSCHHHH
T ss_pred             EEeCCH-HHHHHHHHcCCEEEEECCCCCh
Confidence            999996 9999999999999999876543

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.71  E-value=1e-18  Score=148.04  Aligned_cols=99  Identities=19%  Similarity=0.186  Sum_probs=75.9

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.+++..+++.++.+ ++||.......-.     ...+...+.. ++......+||+|.+|+.+++++|++|++|+|
T Consensus        93 ~~g~~~~l~~l~~~~~~i~i~s~~~~~~~~l~-----~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~l~  167 (221)
T d1o08a_          93 YPGILQLLKDLRSNKIKIALASASKNGPFLLE-----RMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIG  167 (221)
T ss_dssp             CTTHHHHHHHHHHTTCEEEECCSCTTHHHHHH-----HTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGEEE
T ss_pred             cCCceeccccccccccceEEEeecchhhHHHH-----hhccccccccccccccccccccChHHHHHHHHHcCCCCceEEE
Confidence            478999999999999988 6677544211111     0112222332 34556778999999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      |||+. +|+.+|+++|+++|+|.++..
T Consensus       168 VgD~~-~di~~A~~aG~~~i~v~~~~~  193 (221)
T d1o08a_         168 LEDSQ-AGIQAIKDSGALPIGVGRPED  193 (221)
T ss_dssp             EESSH-HHHHHHHHHTCEEEEESCHHH
T ss_pred             EecCH-HHHHHHHHcCCEEEEECChhh
Confidence            99996 999999999999999988643

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.71  E-value=4.7e-19  Score=151.39  Aligned_cols=103  Identities=18%  Similarity=0.259  Sum_probs=74.4

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      ++++.++|+.|+ +++++ ++||.+...........   .+...|+. ++......+||+|.+|+.+++++|++|++|+|
T Consensus       102 ~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~---gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l~  177 (230)
T d1x42a1         102 YPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDAL---GIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVY  177 (230)
T ss_dssp             CTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHH---TCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             cccHHHHHHHhh-ccCceeeeeccccccchhhhccc---ccccccccccccccccccchhhHHHHHHHhhhcccccccce
Confidence            478899999885 56788 78997653222111001   11112222 12234457899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGGIHAT  277 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~  277 (313)
                      |||++.+|+.+|+++|+.+++|.++....
T Consensus       178 vgD~~~~Di~~A~~~G~~~v~v~~~~~~~  206 (230)
T d1x42a1         178 VGDNPVKDCGGSKNLGMTSILLDRKGEKR  206 (230)
T ss_dssp             EESCTTTTHHHHHTTTCEEEEECTTSCCG
T ss_pred             eecCcHhHHHHHHHcCCEEEEECCCCCCc
Confidence            99997789999999999999998765433

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.70  E-value=1.2e-18  Score=147.36  Aligned_cols=108  Identities=16%  Similarity=0.138  Sum_probs=79.1

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchh-ccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcE
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARAL-RVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDS  246 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~-~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~  246 (313)
                      .++++.+.|..+++++.++ ++||........... ......+...|+. ++......+||+|.+|+.++++++++|++|
T Consensus        98 ~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~p~~~  177 (222)
T d1cr6a1          98 INRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNEV  177 (222)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHTSCTTSE
T ss_pred             CCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCCCCChHHHHHHHHHhCCCcceE
Confidence            3589999999999999998 777754432221110 0000112222333 244556788999999999999999999999


Q ss_pred             EEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350          247 IAVGDSLHHDIKGANAAGIQSVFIIGGIHATE  278 (313)
Q Consensus       247 v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~  278 (313)
                      +||||+. .|+.+|+++|+++|+|.+|....+
T Consensus       178 l~IgD~~-~Di~~A~~aG~~ti~V~~~~~~~~  208 (222)
T d1cr6a1         178 VFLDDFG-SNLKPARDMGMVTILVHNTASALR  208 (222)
T ss_dssp             EEEESSS-TTTHHHHHHTCEEEECCSSSHHHH
T ss_pred             EEEECCH-HHHHHHHHcCCEEEEECCcchHHH
Confidence            9999995 999999999999999988665443

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.3e-18  Score=146.54  Aligned_cols=104  Identities=14%  Similarity=0.134  Sum_probs=77.7

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchh-ccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARAL-RVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI  247 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~-~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v  247 (313)
                      ++++.+.+..++++|+++ ++||........... ......+...++. +++.....+||+|.+|+.+++++|++|++|+
T Consensus       101 ~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~e~l  180 (225)
T d1zd3a1         101 NRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEVV  180 (225)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             CccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhcccCcccee
Confidence            478899999999999999 889865533322110 0001112222232 2445567899999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350          248 AVGDSLHHDIKGANAAGIQSVFIIGGIH  275 (313)
Q Consensus       248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~  275 (313)
                      ||||+. +|+.+|+++|+++|+|.++..
T Consensus       181 ~VgD~~-~Di~~A~~~G~~ti~v~~~~~  207 (225)
T d1zd3a1         181 FLDDIG-ANLKPARDLGMVTILVQDTDT  207 (225)
T ss_dssp             EEESCH-HHHHHHHHTTCEEEECSSHHH
T ss_pred             EEecCH-HHHHHHHHcCCEEEEECCcch
Confidence            999995 999999999999999988543

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.62  E-value=9.2e-17  Score=131.72  Aligned_cols=100  Identities=18%  Similarity=0.256  Sum_probs=75.9

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA  248 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~  248 (313)
                      +++....+..++.++..+ ++||..........  .....+...++. +.++....+||+|.+|+.+++++|++|++|+|
T Consensus        86 ~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~--~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~~l~  163 (197)
T d2b0ca1          86 RPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWP--EEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVF  163 (197)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCG--GGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred             CchhHHHHHHHHhcCCeEEEEeCccHHHHHHHH--HHcccchhhccceeecccccccccchHHHHHHHHhcCCCCCeEEE
Confidence            367778888888899888 77775543222111  111234444444 34566778899999999999999999999999


Q ss_pred             EcCCchhhHHHHHHcCCcEEEEcCC
Q 021350          249 VGDSLHHDIKGANAAGIQSVFIIGG  273 (313)
Q Consensus       249 IGDs~~~Di~~a~~aG~~~i~V~~G  273 (313)
                      |||+. +|+++|+++|+++|+|...
T Consensus       164 vgDs~-~di~~A~~aG~~ti~v~~~  187 (197)
T d2b0ca1         164 FDDNA-DNIEGANQLGITSILVKDK  187 (197)
T ss_dssp             EESCH-HHHHHHHTTTCEEEECCST
T ss_pred             EeCCH-HHHHHHHHcCCEEEEECCC
Confidence            99996 9999999999999999764

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.60  E-value=1.7e-15  Score=127.31  Aligned_cols=49  Identities=16%  Similarity=0.247  Sum_probs=46.4

Q ss_pred             ecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350          223 WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIG  272 (313)
Q Consensus       223 ~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~  272 (313)
                      ...||+|.+|+.+++++|++|++|+||||+. +|+.+|+++|+++|+|.+
T Consensus       156 ~~~KP~p~~f~~~~~~lg~~p~e~l~VgD~~-~Dv~~A~~aG~~ti~v~r  204 (225)
T d2g80a1         156 SGKKTETQSYANILRDIGAKASEVLFLSDNP-LELDAAAGVGIATGLASR  204 (225)
T ss_dssp             HCCTTCHHHHHHHHHHHTCCGGGEEEEESCH-HHHHHHHTTTCEEEEECC
T ss_pred             cCCCCChhHhHHHHHhcccCchhceeecCCH-HHHHHHHHcCCEEEEEeC
Confidence            3469999999999999999999999999996 999999999999999976

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=7.3e-15  Score=127.66  Aligned_cols=69  Identities=19%  Similarity=0.183  Sum_probs=58.4

Q ss_pred             cCccEEEEeccceeecCCccC-ccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350           28 RRFKAWLLDQFGVLHDGKKPY-PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~~~~-~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~   99 (313)
                      |++|+|+||+||||+++++-+ +.+.++|++|+++|++++++|  ||+...+.+.++++++..+. ..+++.+
T Consensus         2 ~~iKli~~DlDGTL~~~~~~i~~~~~~al~~L~~~gi~v~i~T--GR~~~~~~~~~~~l~l~~~~-~~~i~~n   71 (271)
T d1rkqa_           2 LAIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTT--GRPYAGVHNYLKELHMEQPG-DYCITYN   71 (271)
T ss_dssp             CCCCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEEC--SSCGGGTHHHHHHTTCCSTT-CEEEEGG
T ss_pred             CCeeEEEEeCCccccCCCCccCHHHHHHHHHHHHCCCEEEEEC--CCCHHHHHHHHHHhcCcCCC-cEEEEcC
Confidence            789999999999999876554 678999999999999999999  99999999999999987654 4445444

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.54  E-value=5.7e-14  Score=118.34  Aligned_cols=179  Identities=12%  Similarity=0.142  Sum_probs=106.2

Q ss_pred             CccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCccc--cc--cc-------
Q 021350           29 RFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLF--AG--AI-------   96 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~--~~--ii-------   96 (313)
                      ++|+|+||+||||+++.. +.+.+.++|++|++.|++++++|  +|+.......+...++.....  ++  +.       
T Consensus         1 kiK~i~~D~DGTL~~~~~~i~~~~~~~l~~l~~~gi~v~~~T--GR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~   78 (230)
T d1wr8a_           1 KIKAISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIMLVT--GNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIF   78 (230)
T ss_dssp             CCCEEEEESTTTTBCTTSCBCHHHHHHHHHHHHTTCCEEEEC--SSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEE
T ss_pred             CceEEEEecCCCCcCCCCccCHHHHHHHHHHHhCCCeEEEEe--CCcHHHHHHHHHhcCCCcccccccceeeeccccccc
Confidence            589999999999998765 45788999999999999999999  887777777777666653210  00  00       


Q ss_pred             ----chHHHHHHHHHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHH
Q 021350           97 ----TSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQ  172 (313)
Q Consensus        97 ----~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (313)
                          .........+....                        .................+.            ......+
T Consensus        79 ~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~------------~~~~~~~  122 (230)
T d1wr8a_          79 LASMDEEWILWNEIRKRF------------------------PNARTSYTMPDRRAGLVIM------------RETINVE  122 (230)
T ss_dssp             SCCCSHHHHHHHHHHHHC------------------------TTCCBCTTGGGCSSCEEEC------------TTTSCHH
T ss_pred             cccccHHHHHHHHHHHhc------------------------ccccceeecccceeeEEEe------------cccccHH
Confidence                00111111111111                        0000000000011122221            1233455


Q ss_pred             HHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcC
Q 021350          173 DLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGD  251 (313)
Q Consensus       173 ~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGD  251 (313)
                      .+++.+..+   +..+ ..+++...                       +....+.+++..++.+++++|++++++++|||
T Consensus       123 ~~~~~~~~~---~~~~~~~~~~~~i-----------------------ei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD  176 (230)
T d1wr8a_         123 TVREIINEL---NLNLVAVDSGFAI-----------------------HVKKPWINKGSGIEKASEFLGIKPKEVAHVGD  176 (230)
T ss_dssp             HHHHHHHHT---TCSCEEEECSSCE-----------------------EEECTTCCHHHHHHHHHHHHTSCGGGEEEEEC
T ss_pred             HHHHHHHHh---ccceEEeeCCcEE-----------------------EEeeCCcCcchhhcccccccccchhheeeeec
Confidence            555555432   2222 22222111                       12233466777999999999999999999999


Q ss_pred             CchhhHHHHHHcCCcEEEEcCC
Q 021350          252 SLHHDIKGANAAGIQSVFIIGG  273 (313)
Q Consensus       252 s~~~Di~~a~~aG~~~i~V~~G  273 (313)
                      +. ||+.|++.+|+ ++.|..+
T Consensus       177 ~~-NDi~ml~~ag~-~vav~na  196 (230)
T d1wr8a_         177 GE-NDLDAFKVVGY-KVAVAQA  196 (230)
T ss_dssp             SG-GGHHHHHHSSE-EEECTTS
T ss_pred             Cc-cHHHHHHHCCe-EEEECCC
Confidence            96 99999999995 5666543

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=99.51  E-value=6.4e-14  Score=122.33  Aligned_cols=57  Identities=21%  Similarity=0.268  Sum_probs=50.9

Q ss_pred             ccEEEEeccceeecCCccC-ccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           30 FKAWLLDQFGVLHDGKKPY-PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        30 ~k~iifDlDGTL~~~~~~~-~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      +|+|+||+||||+++...+ +.+.++|++|+++|++++++|  ||+...+.+.++++|+.
T Consensus         1 iKli~~DlDGTLl~~~~~i~~~~~~~l~~l~~~Gi~~~i~T--GR~~~~~~~~~~~l~~~   58 (285)
T d1nrwa_           1 MKLIAIDLDGTLLNSKHQVSLENENALRQAQRDGIEVVVST--GRAHFDVMSIFEPLGIK   58 (285)
T ss_dssp             CCEEEEECCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEEC--SSCHHHHHHHHGGGTCC
T ss_pred             CeEEEEECCccccCCCCccCHHHHHHHHHHHHCCCEEEEEC--CCCHHHHHHHHHHhCCC
Confidence            5799999999999876554 679999999999999999999  99988898999999886

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=99.45  E-value=2.7e-13  Score=117.19  Aligned_cols=179  Identities=18%  Similarity=0.264  Sum_probs=106.1

Q ss_pred             cEEEEeccceeecCC-c-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHH--HHHhCCCCCcccccccchHHHHHHHH
Q 021350           31 KAWLLDQFGVLHDGK-K-PYPGAISTLEMLATTGAKMVVISNSSRRASTTID--KLKSLGFDPSLFAGAITSGELTHQYL  106 (313)
Q Consensus        31 k~iifDlDGTL~~~~-~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~--~l~~~G~~~~~~~~ii~~~~~~~~~l  106 (313)
                      |+|+||+||||++.. . +.+.+.++|++|+++|++++++|  ||+...+..  .+..++..    +.+++.+       
T Consensus         2 k~if~DlDGTL~~~~~~~i~~~~~~al~~l~~~gi~v~~~T--GR~~~~~~~l~~~~~~~~~----~~~I~~n-------   68 (260)
T d2rbka1           2 KALFFDIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFIAT--GRPKAIINNLSELQDRNLI----DGYITMN-------   68 (260)
T ss_dssp             CEEEECSBTTTBCTTTSSCCHHHHHHHHHHHHTTCEEEEEC--SSCGGGCCSCHHHHHTTCC----CEEEEGG-------
T ss_pred             eEEEEECCCCCcCCCCCCCCHHHHHHHHHHHHCCCEEEEEC--CCCHHHHHHHHHHHhcCCC----CceEecC-------
Confidence            799999999999753 3 44679999999999999999999  776543321  22233332    2233332       


Q ss_pred             HhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCC
Q 021350          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKI  186 (313)
Q Consensus       107 ~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~  186 (313)
                                 |..++.                       ..+.+..             ..++++.++++++.+.+++.
T Consensus        69 -----------Ga~i~~-----------------------~~~~i~~-------------~~l~~~~~~~i~~~~~~~~~  101 (260)
T d2rbka1          69 -----------GAYCFV-----------------------GEEVIYK-------------SAIPQEEVKAMAAFCEKKGV  101 (260)
T ss_dssp             -----------GTEEEE-----------------------TTEEEEE-------------CCCCHHHHHHHHHHHHHHTC
T ss_pred             -----------Cccccc-----------------------Ccccccc-------------cCCCHHHHHHHHHHHHHcCC
Confidence                       332221                       0011111             34667778888887777777


Q ss_pred             cEEEEcCCcc-ccccch---------h---ccC-------------------C-chHHHHHHHhcC-c------------
Q 021350          187 PMVVANPDYV-TVEARA---------L---RVM-------------------P-GTLASKFEKLGG-E------------  220 (313)
Q Consensus       187 ~~i~tn~d~~-~~~~~~---------~---~~~-------------------~-g~~~~~~~~~~~-~------------  220 (313)
                      .+++...+.. ......         .   ...                   . .......+.... .            
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~  181 (260)
T d2rbka1         102 PCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLPSIPTCEIGRWYPAFADVT  181 (260)
T ss_dssp             CEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECCCHHHHHHHGGGSTTCEEECSSTTCCEEE
T ss_pred             cEEEEecCceeeccchHHHHHHHHHhhccCcCcccCHhHhcCcceEEEeecCCHHHHHHHHHHhccccceeecCcEEEEE
Confidence            7654432221 111110         0   000                   0 000111111100 0            


Q ss_pred             eeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350          221 VRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGG  273 (313)
Q Consensus       221 ~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G  273 (313)
                      +..++|..  +++.+++++|++++++++|||+. ||+.|.+.+|. ++.|..+
T Consensus       182 p~~~sK~~--al~~l~~~~~i~~~~~~a~GD~~-ND~~Ml~~a~~-svav~na  230 (260)
T d2rbka1         182 AKGDTKQK--GIDEIIRHFGIKLEETMSFGDGG-NDISMLRHAAI-GVAMGQA  230 (260)
T ss_dssp             STTCSHHH--HHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSE-EEECTTS
T ss_pred             eCCCCHHH--HHHHHHHhccccHhheeEecCCc-ccHHHHHhCCe-EEEeCCC
Confidence            11134444  89999999999999999999995 99999999995 6777543

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.43  E-value=2.8e-13  Score=114.55  Aligned_cols=58  Identities=17%  Similarity=0.179  Sum_probs=47.4

Q ss_pred             CccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           29 RFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      .+|+|+||+||||+++.. +.+++.++++.|++.|++++++|  +|+..........+|+.
T Consensus         2 miKli~~D~DGTL~~~~~~i~~~~~~al~~l~~~g~~v~~~T--Gr~~~~~~~~~~~~~~~   60 (225)
T d1l6ra_           2 MIRLAAIDVDGNLTDRDRLISTKAIESIRSAEKKGLTVSLLS--GNVIPVVYALKIFLGIN   60 (225)
T ss_dssp             CCCEEEEEHHHHSBCTTSCBCHHHHHHHHHHHHTTCEEEEEC--SSCHHHHHHHHHHHTCC
T ss_pred             CeEEEEEecCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEc--CCchhhhHHHHHHcCCC
Confidence            468999999999998764 45789999999999999999999  77776555555556664

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=99.41  E-value=4.4e-13  Score=116.09  Aligned_cols=57  Identities=25%  Similarity=0.303  Sum_probs=49.0

Q ss_pred             ccEEEEeccceeecCCccC--ccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           30 FKAWLLDQFGVLHDGKKPY--PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        30 ~k~iifDlDGTL~~~~~~~--~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      +|+|+||+||||+++.+.+  |.+.++|++|+++|++++++|  ||+...+.+.++++++.
T Consensus         2 IKli~~DlDGTLl~~~~~~~~~~~~~~l~~l~~~gi~~~i~T--GR~~~~~~~~~~~l~~~   60 (269)
T d1rlma_           2 VKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVAS--GNQYYQLISFFPELKDE   60 (269)
T ss_dssp             CCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHHHTCEEEEEC--SSCHHHHGGGCTTTTTT
T ss_pred             EEEEEEeCCccCcCCCCcCChHHHHHHHHHHHHCCCEEEEEc--CCCHHHHHHHHHHhCcc
Confidence            7899999999998865443  568999999999999999999  88888888888888775

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.40  E-value=6.2e-13  Score=105.14  Aligned_cols=47  Identities=13%  Similarity=0.188  Sum_probs=38.0

Q ss_pred             CCCHHHHHHHHHHhCCCCCc-EEEEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350          226 KPDKIIYKSAMAMVGVDACD-SIAVGDSLHHDIKGANAAGIQSVFIIGG  273 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~-~v~IGDs~~~Di~~a~~aG~~~i~V~~G  273 (313)
                      +|+.......++++..+..+ ++||||+. +|+++|+++|++++.|.+|
T Consensus       100 ~~d~~~k~~~l~~~~~~~~~i~~~igD~~-~dv~a~~~~Gi~~~~V~~G  147 (149)
T d1ltqa1         100 RKDDVVKEEIFWKHIAPHFDVKLAIDDRT-QVVEMWRRIGVECWQVASG  147 (149)
T ss_dssp             SCHHHHHHHHHHHHTTTTCEEEEEEECCH-HHHHHHHHTTCCEEECSCC
T ss_pred             CCchHHHHHHHHHhccCCCceEEEEcCCH-HHHHHHHHCCCcEEEeCCC
Confidence            55556666777777666555 56789996 9999999999999999998

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=99.37  E-value=2.6e-12  Score=111.30  Aligned_cols=57  Identities=18%  Similarity=0.181  Sum_probs=45.8

Q ss_pred             CccEEEEeccceeecCCcc-CccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           29 RFKAWLLDQFGVLHDGKKP-YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~~-~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      .||+|+||+||||+++.+. .+.+.++|+++++. ..++++|  ||+...+.+.+++++..
T Consensus         1 m~Kli~~DlDGTL~~~~~~i~~~~~~al~~l~~~-~~~~i~T--GR~~~~~~~~~~~~~~~   58 (267)
T d1nf2a_           1 MYRVFVFDLDGTLLNDNLEISEKDRRNIEKLSRK-CYVVFAS--GRMLVSTLNVEKKYFKR   58 (267)
T ss_dssp             CBCEEEEECCCCCSCTTSCCCHHHHHHHHHHTTT-SEEEEEC--SSCHHHHHHHHHHHSSS
T ss_pred             CeEEEEEeCCccccCCcCccCHHHHHHHHHHHcC-CEEEEEC--CCChHHHHHHHHHhccc
Confidence            3789999999999986654 46788999998765 4788888  88888888888776653

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=99.34  E-value=6.5e-12  Score=105.38  Aligned_cols=60  Identities=20%  Similarity=0.225  Sum_probs=52.1

Q ss_pred             hcCccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           27 TRRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        27 ~~~~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      |++.-.|++|+||||++... +.+.+.++|++|+++|++++++|  ||+...+.+.++.+|+.
T Consensus         1 ~~~~~li~~DlDGTLl~~~~~i~~~~~~al~~l~~~Gi~~~i~T--GR~~~~~~~~~~~~~~~   61 (232)
T d1xvia_           1 IQQPLLVFSDLDGTLLDSHSYDWQPAAPWLTRLREANVPVILCS--SKTSAEMLYLQKTLGLQ   61 (232)
T ss_dssp             CCCCEEEEEECTTTTSCSSCCSCCTTHHHHHHHHHTTCCEEEEC--SSCHHHHHHHHHHTTCT
T ss_pred             CCCCEEEEEECCCCccCCcCcCCHHHHHHHHHHHHCCCEEEEEe--CCChhhchhHHHHhccC
Confidence            34556899999999998654 56789999999999999999999  99999999999999885

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.28  E-value=1.5e-11  Score=104.11  Aligned_cols=56  Identities=21%  Similarity=0.169  Sum_probs=50.7

Q ss_pred             ccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350           30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (313)
Q Consensus        30 ~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~   88 (313)
                      +|+|+||+||||+++.. .+.+.++|++++++|+.++++|  ||+...+...++.+++.
T Consensus         2 iKli~~DlDGTLl~~~~-~~~~~~ai~~l~~~G~~~~~aT--GR~~~~~~~~~~~~~~~   57 (243)
T d1wzca1           2 IRLIFLDIDKTLIPGYE-PDPAKPIIEELKDMGFEIIFNS--SKTRAEQEYYRKELEVE   57 (243)
T ss_dssp             EEEEEECCBTTTBSSSC-SGGGHHHHHHHHHTTEEEEEEC--SSCHHHHHHHHHHHTCC
T ss_pred             cEEEEEeCCCCCCCCCC-CHHHHHHHHHHHHCCCEEEEEe--CCCHHHHHHHHHHhccc
Confidence            68999999999998665 4778999999999999999999  99999999999988886

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=99.28  E-value=1.8e-11  Score=105.99  Aligned_cols=58  Identities=16%  Similarity=0.163  Sum_probs=47.5

Q ss_pred             cCccEEEEeccceeec-CC-ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCC
Q 021350           28 RRFKAWLLDQFGVLHD-GK-KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGF   87 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~-~~-~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~   87 (313)
                      +++|.|+||+||||+. .. .+.+.+.++|.+|+++|++++++|  ||+...+...+.++++
T Consensus         8 ~~ikli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~Gi~v~i~T--GR~~~~~~~~~~~l~~   67 (283)
T d2b30a1           8 ADIKLLLIDFDGTLFVDKDIKVPSENIDAIKEAIEKGYMVSICT--GRSKVGILSAFGEENL   67 (283)
T ss_dssp             CCCCEEEEETBTTTBCCTTTCSCHHHHHHHHHHHHHTCEEEEEC--SSCHHHHHHHHCHHHH
T ss_pred             cCccEEEEECCCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEEc--CCCHHHHHHHHHHhCc
Confidence            4799999999999984 43 455789999999999999999999  8888777766665543

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=1.3e-11  Score=101.86  Aligned_cols=44  Identities=23%  Similarity=0.216  Sum_probs=38.7

Q ss_pred             CCCCHHHHHHHHHHhC----CCCCcEEEEcCCc----------------hhhHHHHHHcCCcEE
Q 021350          225 GKPDKIIYKSAMAMVG----VDACDSIAVGDSL----------------HHDIKGANAAGIQSV  268 (313)
Q Consensus       225 gKP~~~~~~~~~~~lg----v~~~~~v~IGDs~----------------~~Di~~a~~aG~~~i  268 (313)
                      .||+|.+++.++++++    ++.++++||||..                .+|+++|+++|+...
T Consensus       115 RKP~~GM~~~~~~~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~  178 (195)
T d1yj5a1         115 RKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA  178 (195)
T ss_dssp             STTSTHHHHHHHHTSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred             CCCccHHHHHHHHHhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence            3999999999999875    8999999999942                399999999999864

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.14  E-value=6.5e-11  Score=99.40  Aligned_cols=94  Identities=12%  Similarity=0.061  Sum_probs=59.9

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHH-H-HHHHh---------cCceeecCCCCHHHHHHHHHH
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLA-S-KFEKL---------GGEVRWMGKPDKIIYKSAMAM  238 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~-~-~~~~~---------~~~~~~~gKP~~~~~~~~~~~  238 (313)
                      ++++.+.++.++++|+++ ++|+........-...++..... . -+...         ...+...+||++.....++++
T Consensus        77 ~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~  156 (226)
T d2feaa1          77 REGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHE  156 (226)
T ss_dssp             CTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHHHHH
T ss_pred             hHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccCCHHHHHHHHHH
Confidence            368888999999999988 77774432211100001000000 0 00000         001223456777799999999


Q ss_pred             hCCCCCcEEEEcCCchhhHHHHHHcCC
Q 021350          239 VGVDACDSIAVGDSLHHDIKGANAAGI  265 (313)
Q Consensus       239 lgv~~~~~v~IGDs~~~Di~~a~~aG~  265 (313)
                      +++++++|+||||+. +|+.||++||+
T Consensus       157 ~~~~~~~~i~iGDs~-~Dl~~a~~A~~  182 (226)
T d2feaa1         157 LSEPNQYIIMIGDSV-TDVEAAKLSDL  182 (226)
T ss_dssp             HCCTTCEEEEEECCG-GGHHHHHTCSE
T ss_pred             hcCCCceEEEEeCch-hhHHHHHHCCE
Confidence            999999999999996 99999999995

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.13  E-value=1.5e-10  Score=105.63  Aligned_cols=109  Identities=19%  Similarity=0.248  Sum_probs=79.2

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCc---------hHHHHHH--HhcCceeecCCCCHHHHHHHHH
Q 021350          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPG---------TLASKFE--KLGGEVRWMGKPDKIIYKSAMA  237 (313)
Q Consensus       170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g---------~~~~~~~--~~~~~~~~~gKP~~~~~~~~~~  237 (313)
                      +++++.+++..|+++|+++ ++|+........-...++..         .......  .........+||+|..|..++.
T Consensus       216 p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~  295 (380)
T d1qyia_         216 PVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALY  295 (380)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHH
T ss_pred             chhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHHHH
Confidence            5689999999999999999 78886653322111111110         0111111  1244556789999999999986


Q ss_pred             Hh--------------CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350          238 MV--------------GVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATEL  279 (313)
Q Consensus       238 ~l--------------gv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~  279 (313)
                      .+              ++++++|+||||+. +|+.+|++||+.+|+|.+|.+....
T Consensus       296 ~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~-~D~~aak~Ag~~~Igv~~G~~g~~~  350 (380)
T d1qyia_         296 GNNRDKYESYINKQDNIVNKDDVFIVGDSL-ADLLSAQKIGATFIGTLTGLKGKDA  350 (380)
T ss_dssp             CCCGGGHHHHHHCCTTCSCTTTEEEEESSH-HHHHHHHHHTCEEEEESCBTTBGGG
T ss_pred             HcCCCHHHHHHHHHHhCCCCCeEEEECCCH-HHHHHHHHCCCCEEEEecCCCCccc
Confidence            54              56789999999997 9999999999999999999876653

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=99.12  E-value=1e-10  Score=99.56  Aligned_cols=59  Identities=8%  Similarity=-0.020  Sum_probs=45.8

Q ss_pred             cCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350           28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (313)
Q Consensus        28 ~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~   89 (313)
                      |+-.+++||+||||++....+ ...+.+.++++.|+.++++|  +|+..++.+.++.+++..
T Consensus         1 m~~~li~~DlDGTL~~~~~~~-~~~~~~~~~~~~g~~v~i~T--GR~~~~~~~~~~~~~~~~   59 (244)
T d1s2oa1           1 MRQLLLISDLDNTWVGDQQAL-EHLQEYLGDRRGNFYLAYAT--GRSYHSARELQKQVGLME   59 (244)
T ss_dssp             CCSEEEEECTBTTTBSCHHHH-HHHHHHHHTTGGGEEEEEEC--SSCHHHHHHHHHHHTCCC
T ss_pred             CCceEEEEECcccCCCCCCCH-HHHHHHHHHHcCCCEEEEEC--CCCHHHHHHHHHHcCCCC
Confidence            455688899999999866543 44556666778899999988  998888888888888753

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=1.6e-10  Score=97.07  Aligned_cols=37  Identities=16%  Similarity=0.136  Sum_probs=28.1

Q ss_pred             HHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEE
Q 021350          230 IIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFI  270 (313)
Q Consensus       230 ~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V  270 (313)
                      ...+.+.++  +++++|++|||+. +|+.|++++|+. +.+
T Consensus       156 ~~v~~~~~~--~~~~~~~~vGDs~-~Di~~~~~ag~~-va~  192 (217)
T d1nnla_         156 KVIKLLKEK--FHFKKIIMIGDGA-TDMEACPPADAF-IGF  192 (217)
T ss_dssp             HHHHHHHHH--HCCSCEEEEESSH-HHHTTTTTSSEE-EEE
T ss_pred             HHHHHHHhc--cCccccEEEEeCH-hhHHHHHhCCce-EEE
Confidence            355555444  4679999999996 999999999964 444

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.96  E-value=4.2e-10  Score=92.43  Aligned_cols=46  Identities=24%  Similarity=0.377  Sum_probs=40.3

Q ss_pred             ecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEE
Q 021350          223 WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFI  270 (313)
Q Consensus       223 ~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V  270 (313)
                      ..+++.+......+++++++++++++|||+. +|+.|+++||+. |.+
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~-nDi~m~~~ag~~-va~  183 (210)
T d1j97a_         138 LKENAKGEILEKIAKIEGINLEDTVAVGDGA-NDISMFKKAGLK-IAF  183 (210)
T ss_dssp             CSTTHHHHHHHHHHHHHTCCGGGEEEEESSG-GGHHHHHHCSEE-EEE
T ss_pred             cccccccchhhhHHHHhcccccceEEecCCc-ChHHHHHHCCCC-EEE
Confidence            3567778899999999999999999999996 999999999964 445

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.84  E-value=1.3e-10  Score=95.28  Aligned_cols=43  Identities=19%  Similarity=0.108  Sum_probs=35.9

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEE
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFI  270 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V  270 (313)
                      .+.+......++++++++++|++|||+. ||+.|.+.||+. |.+
T Consensus       128 ~~~~~~~~~~~~~~~i~~~eviaiGDg~-NDi~Ml~~Ag~g-IAm  170 (206)
T d1rkua_         128 LRQKDPKRQSVIAFKSLYYRVIAAGDSY-NDTTMLSEAHAG-ILF  170 (206)
T ss_dssp             CCSSSHHHHHHHHHHHTTCEEEEEECSS-TTHHHHHHSSEE-EEE
T ss_pred             ccchhhHHHHHHHhcccccceEEecCCc-cCHHHHHhCCcc-EEE
Confidence            3444477888999999999999999995 999999999954 444

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=98.75  E-value=1.4e-08  Score=82.30  Aligned_cols=43  Identities=23%  Similarity=0.254  Sum_probs=36.0

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEE
Q 021350          226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFI  270 (313)
Q Consensus       226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V  270 (313)
                      ++....++..++++++++++|++|||+. +|+.+.+.+|+ ++.+
T Consensus        79 ~~K~~~l~~~~~~~~i~~~~v~~vGDd~-nDl~~l~~~g~-siap  121 (177)
T d1k1ea_          79 LEKETACFDLMKQAGVTAEQTAYIGDDS-VDLPAFAACGT-SFAV  121 (177)
T ss_dssp             SCHHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSE-EEEC
T ss_pred             ccHHHHHHHHHHHhcCCcceeEEecCCc-cHHHHHhhCCe-EEEc
Confidence            3444578889999999999999999997 99999999994 4443

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=4.1e-09  Score=88.01  Aligned_cols=47  Identities=9%  Similarity=-0.120  Sum_probs=36.8

Q ss_pred             eeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCc---hhhHHHHHHcCCcEEEEcC
Q 021350          221 VRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSL---HHDIKGANAAGIQSVFIIG  272 (313)
Q Consensus       221 ~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~---~~Di~~a~~aG~~~i~V~~  272 (313)
                      +..++|.+  +++.+++   .+++++++|||+.   .||++|.+++|..++.|..
T Consensus       181 ~~~vsKg~--al~~L~~---~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~n  230 (244)
T d2fuea1         181 PEGWDKRY--CLDSLDQ---DSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS  230 (244)
T ss_dssp             ETTCSTTH--HHHHHTT---SCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred             chhccHHH--HHHHHhc---CChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCC
Confidence            34566776  6776654   5999999999984   4999999999977777764

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=98.64  E-value=2.9e-08  Score=81.80  Aligned_cols=61  Identities=15%  Similarity=0.079  Sum_probs=46.6

Q ss_pred             CccEEEEeccceeecCC-----------------------------------ccCccHHHHHHHHHHCCCcEEEEeCCCC
Q 021350           29 RFKAWLLDQFGVLHDGK-----------------------------------KPYPGAISTLEMLATTGAKMVVISNSSR   73 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~-----------------------------------~~~~~a~~~l~~l~~~g~~~~~~Tn~~~   73 (313)
                      +.-+|+||+|-|++++.                                   .++|++.++++.++++|++++++||...
T Consensus        34 ~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~~Gv~IfyVTnR~~  113 (209)
T d2b82a1          34 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSP  113 (209)
T ss_dssp             CCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSCC
T ss_pred             CCceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHHHHHcCCeEEEEeCCch
Confidence            34599999999998842                                   1456899999999999999999998553


Q ss_pred             C-chHHHHHHH-hCCCCC
Q 021350           74 R-ASTTIDKLK-SLGFDP   89 (313)
Q Consensus        74 ~-~~~~~~~l~-~~G~~~   89 (313)
                      . .+...+.|+ .+|++.
T Consensus       114 ~~~e~T~~nL~K~lG~p~  131 (209)
T d2b82a1         114 TKTETVSKTLADNFHIPA  131 (209)
T ss_dssp             CSSCCHHHHHHHHTTCCT
T ss_pred             hhHHHHHHHHHHHcCCCc
Confidence            3 344556664 488874

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.61  E-value=3.4e-08  Score=81.78  Aligned_cols=46  Identities=17%  Similarity=0.175  Sum_probs=35.2

Q ss_pred             EEEEeccceeec-----CC-ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHH
Q 021350           32 AWLLDQFGVLHD-----GK-KPYPGAISTLEMLATTGAKMVVISNSSRRASTTID   80 (313)
Q Consensus        32 ~iifDlDGTL~~-----~~-~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~   80 (313)
                      .|+||+||||++     +. .+.+.+.++|++|++ +..++++|  ||+...+..
T Consensus         2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l~~-~~~v~i~T--GR~~~~l~~   53 (229)
T d1u02a_           2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKE-RFDTYIVT--GRSPEEISR   53 (229)
T ss_dssp             EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHH-HSEEEEEC--SSCHHHHHH
T ss_pred             EEEEEecCCCCCCCCChhhCCCCHHHHHHHHHHhh-CCCEEEEc--CCCHHHhhh
Confidence            699999999986     22 345778999999987 45688888  887766543

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=9.6e-07  Score=73.17  Aligned_cols=53  Identities=17%  Similarity=0.081  Sum_probs=41.6

Q ss_pred             CccEEEEeccceeecCC-ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHh
Q 021350           29 RFKAWLLDQFGVLHDGK-KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKS   84 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~-~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~   84 (313)
                      ..|.++||+||||+++. ++.+.+.++|+++++.|+ ++++|  +|+.......+..
T Consensus         2 ~~kl~~fDlDGTLl~~~~~i~~~~~~al~~l~~~g~-~~i~T--gr~~~~~~~~~~~   55 (243)
T d2amya1           2 GPALCLFDVDGTLTAPRQKITKEMDDFLQKLRQKIK-IGVVG--GSDFEKVQEQLGN   55 (243)
T ss_dssp             CSEEEEEESBTTTBCTTSCCCHHHHHHHHHHTTTSE-EEEEC--SSCHHHHHHHHCT
T ss_pred             CCEEEEEcCcCCeeCCCCcCCHHHHHHHHHHHcCCC-EEEEc--CCChHHhHHHHhh
Confidence            46899999999999866 445789999999998885 67888  7777666555543

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=97.95  E-value=6.6e-06  Score=61.86  Aligned_cols=59  Identities=19%  Similarity=0.227  Sum_probs=44.5

Q ss_pred             ccEEEEeccceeecC-------CccCccHHHHHHHHHHCCCcEEEEeCCC-CC------------chHHHHHHHhCCCC
Q 021350           30 FKAWLLDQFGVLHDG-------KKPYPGAISTLEMLATTGAKMVVISNSS-RR------------ASTTIDKLKSLGFD   88 (313)
Q Consensus        30 ~k~iifDlDGTL~~~-------~~~~~~a~~~l~~l~~~g~~~~~~Tn~~-~~------------~~~~~~~l~~~G~~   88 (313)
                      ++.|+||+||||...       ..+++++.+.++.|++.|+.+++.|..+ ++            .+...+.|++.|++
T Consensus         1 mK~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~   79 (124)
T d1xpja_           1 MKKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVP   79 (124)
T ss_dssp             CCEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCC
T ss_pred             CCEEEEeCCCCeECCCCCCcCccCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCCC
Confidence            368999999999762       2478899999999999999999999432 11            12345667777775

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.78  E-value=1.1e-05  Score=60.44  Aligned_cols=57  Identities=19%  Similarity=0.296  Sum_probs=45.7

Q ss_pred             EEEEeccceeecC-----CccCccHHHHHHHHHHCCCcEEEEeCCCCCc---hHHHHHHHhCCCCCc
Q 021350           32 AWLLDQFGVLHDG-----KKPYPGAISTLEMLATTGAKMVVISNSSRRA---STTIDKLKSLGFDPS   90 (313)
Q Consensus        32 ~iifDlDGTL~~~-----~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~---~~~~~~l~~~G~~~~   90 (313)
                      .|+||+||||...     .++++++.+.+++|+++|..+++.|  +|..   +...+.|++.|++-.
T Consensus         2 ti~vDiDGTl~~~~~~~~~kPi~~~Ie~l~~L~~~G~~IIi~T--aR~~~~~~~t~~wL~~~~i~yd   66 (122)
T d2obba1           2 TIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQEKHRLILWS--VREGELLDEAIEWCRARGLEFY   66 (122)
T ss_dssp             EEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHTTCEEEECC--SCCHHHHHHHHHHHHTTTCCCS
T ss_pred             EEEEEcCCCcCCCCCCccccccHHHHHHHHHHHHCCCeEEEEe--cCCCcchHHHHHHHHHcCCCce
Confidence            5899999999772     2578999999999999999999999  5543   345677788888743

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.47  E-value=0.00066  Score=53.40  Aligned_cols=58  Identities=16%  Similarity=0.300  Sum_probs=46.7

Q ss_pred             EEEEeccceeecC--CccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcc
Q 021350           32 AWLLDQFGVLHDG--KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSL   91 (313)
Q Consensus        32 ~iifDlDGTL~~~--~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~   91 (313)
                      .++||..|||+-.  .++-+++.++|+.|++.|+++.++|  +-.........+++|+....
T Consensus         4 ~~~~d~~~~~~~~~~Dp~R~~~~~~I~~l~~~GI~v~miT--GD~~~tA~~ia~~~Gi~~~~   63 (168)
T d1wpga2           4 VICSDKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMIT--GDNKGTAIAICRRIGIFGEN   63 (168)
T ss_dssp             EEEECCTTTTBCCCECCBCTTHHHHHHHHHHTTCEEEEEC--SSCHHHHHHHHHHTTSSCTT
T ss_pred             EEEECCccEEEEEecCCCchhHHHHHHHHHHCcCEEEEEC--CCCHHHHHHHHHHcCCCCCc
Confidence            6889999998876  4566899999999999999999999  55556666666778886433

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.04  E-value=0.0018  Score=48.87  Aligned_cols=101  Identities=16%  Similarity=0.153  Sum_probs=69.8

Q ss_pred             CccEEEEeccceeecC--CccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHHHHHHH
Q 021350           29 RFKAWLLDQFGVLHDG--KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYL  106 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~--~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l  106 (313)
                      ++.+++||.+||+..+  +++-+++.+.|+.|++.|+++.++|  +-..+......+++|++... .+. ++.... ..+
T Consensus         2 ~~~~~~~d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilT--GD~~~~a~~ia~~lgI~~v~-~~~-~p~~k~-~~v   76 (135)
T d2b8ea1           2 KVTAVIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMIT--GDNWRSAEAISRELNLDLVI-AEV-LPHQKS-EEV   76 (135)
T ss_dssp             HCCEEEEECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEEC--SSCHHHHHHHHHHHTCSEEE-CSC-CHHHHH-HHH
T ss_pred             eEEEEEECCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEc--CcchhhhhHHHhhhhhhhhc-ccc-chhHHH-HHH
Confidence            3578999999999775  3567899999999999999999999  66666666666788986332 232 233222 223


Q ss_pred             HhcCchhhhhcCCeEEEeecCcccchhhccCCcc
Q 021350          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLK  140 (313)
Q Consensus       107 ~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~  140 (313)
                      .+...      |..+.+++-+.+....|....+-
T Consensus        77 ~~~q~------~~~v~~vGDg~nD~~aL~~Advg  104 (135)
T d2b8ea1          77 KKLQA------KEVVAFVGDGINDAPALAQADLG  104 (135)
T ss_dssp             HHHTT------TSCEEEEECSSSSHHHHHHSSEE
T ss_pred             HHHHc------CCEEEEEeCCCCcHHHHHhCCee
Confidence            22221      56677777777777777776543

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.41  E-value=0.27  Score=36.25  Aligned_cols=87  Identities=10%  Similarity=0.061  Sum_probs=56.1

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEEEE
Q 021350          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAV  249 (313)
Q Consensus       171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~I  249 (313)
                      .++..+.++.|++.|+.+ ++|. |....           ...+-..+|..... +--.|.--....+++.- -..+.||
T Consensus        23 r~~a~~~I~~L~~~Gi~v~ilTG-D~~~~-----------a~~ia~~lgI~~v~-~~~~p~~k~~~v~~~q~-~~~v~~v   88 (135)
T d2b8ea1          23 KESAKPAVQELKRMGIKVGMITG-DNWRS-----------AEAISRELNLDLVI-AEVLPHQKSEEVKKLQA-KEVVAFV   88 (135)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECS-SCHHH-----------HHHHHHHHTCSEEE-CSCCHHHHHHHHHHHTT-TSCEEEE
T ss_pred             CccHHHHHHHHHHcCCEEEEEcC-cchhh-----------hhHHHhhhhhhhhc-cccchhHHHHHHHHHHc-CCEEEEE
Confidence            368888999999999998 5664 43111           11122335554443 44455555555565553 3678999


Q ss_pred             cCCchhhHHHHHHcCCcEEEEcCC
Q 021350          250 GDSLHHDIKGANAAGIQSVFIIGG  273 (313)
Q Consensus       250 GDs~~~Di~~a~~aG~~~i~V~~G  273 (313)
                      ||+. ||..+.+++++ +|.+.+|
T Consensus        89 GDg~-nD~~aL~~Adv-gia~~~~  110 (135)
T d2b8ea1          89 GDGI-NDAPALAQADL-GIAVGSG  110 (135)
T ss_dssp             ECSS-SSHHHHHHSSE-EEEECCC
T ss_pred             eCCC-CcHHHHHhCCe-eeecCcc
Confidence            9997 99999999985 3555544

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=91.81  E-value=0.25  Score=37.94  Aligned_cols=84  Identities=15%  Similarity=0.208  Sum_probs=54.8

Q ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHH--------HHHHHHHhcCchhhhhcC
Q 021350           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE--------LTHQYLLRRDDAWFAALG  118 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~--------~~~~~l~~~~~~~~~~~g  118 (313)
                      ++|++.+.|+.|++.|+++.++||+.   +...+.++.+|+.... +.++++..        .......++..      -
T Consensus        80 ~~~gv~~~l~~l~~~g~~~~i~Sn~~---~~~~~~l~~~~l~~~f-d~i~~~~~~~~~KP~p~~~~~~~~~~~------~  149 (187)
T d2fi1a1          80 LFEGVSDLLEDISNQGGRHFLVSHRN---DQVLEILEKTSIAAYF-TEVVTSSSGFKRKPNPESMLYLREKYQ------I  149 (187)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSC---THHHHHHHHTTCGGGE-EEEECGGGCCCCTTSCHHHHHHHHHTT------C
T ss_pred             ccchhHHHHHHHHhhhccccccccCc---cchhhhhhhhcccccc-ccccccccccccCCCHHHHHHHHHHcC------C
Confidence            67899999999999999999999854   3455678889987654 77776532        12222222221      2


Q ss_pred             CeEEEeecCcccchhhccCCcc
Q 021350          119 RSCIHMTWSDRGAISLEGLGLK  140 (313)
Q Consensus       119 ~~~~~~~~~~~~~~~l~~~g~~  140 (313)
                      ..+.+++-........++.|++
T Consensus       150 ~~~l~vgDs~~Di~aA~~aG~~  171 (187)
T d2fi1a1         150 SSGLVIGDRPIDIEAGQAAGLD  171 (187)
T ss_dssp             SSEEEEESSHHHHHHHHHTTCE
T ss_pred             CCeEEEeCCHHHHHHHHHcCCE
Confidence            3455665555555566677764

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.85  E-value=0.099  Score=44.09  Aligned_cols=33  Identities=24%  Similarity=0.281  Sum_probs=25.1

Q ss_pred             CCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350          241 VDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGI  274 (313)
Q Consensus       241 v~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~  274 (313)
                      -+.+++++|||+. +|+.||+.+......+..|+
T Consensus       222 ~~~~~vI~iGDs~-~Dl~Ma~g~~~~~~~l~igF  254 (291)
T d2bdua1         222 KDNSNIILLGDSQ-GDLRMADGVANVEHILKIGY  254 (291)
T ss_dssp             TTCCEEEEEESSS-GGGGTTTTCSCCSEEEEEEE
T ss_pred             CCcCcEEEEeCCH-hHHHHHhCCccccceeeeeh
Confidence            3678899999997 99999997765444445565

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.44  E-value=0.039  Score=44.00  Aligned_cols=45  Identities=9%  Similarity=-0.099  Sum_probs=32.4

Q ss_pred             ecCCCCHHHHHHHHHHhCCCCCcEEEEcCCc---hhhHHHHHHcCCcEEEEcC
Q 021350          223 WMGKPDKIIYKSAMAMVGVDACDSIAVGDSL---HHDIKGANAAGIQSVFIIG  272 (313)
Q Consensus       223 ~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~---~~Di~~a~~aG~~~i~V~~  272 (313)
                      .++|..  +++++   ++++++++++|||++   .||++|.+++|..++.|..
T Consensus       183 ~vsKg~--al~~l---~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~  230 (243)
T d2amya1         183 GWDKRY--CLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA  230 (243)
T ss_dssp             TCSGGG--GGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred             ccCHHH--HHHHH---hCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC
Confidence            455665  44444   467999999999942   4999999999966666543

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.33  E-value=0.072  Score=41.63  Aligned_cols=43  Identities=14%  Similarity=0.031  Sum_probs=32.7

Q ss_pred             CccEEEEeccceeecCCc------------------------cCccHHHHHHHHHHCCCcEEEEeCCC
Q 021350           29 RFKAWLLDQFGVLHDGKK------------------------PYPGAISTLEMLATTGAKMVVISNSS   72 (313)
Q Consensus        29 ~~k~iifDlDGTL~~~~~------------------------~~~~a~~~l~~l~~~g~~~~~~Tn~~   72 (313)
                      +-.++++|+|+||+++..                        .=|++.++|+.+.+. ..+++-|.+.
T Consensus        14 ~k~~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~-yei~I~Ta~~   80 (181)
T d1ta0a_          14 DKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL-FECVLFTASL   80 (181)
T ss_dssp             TSCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSC
T ss_pred             CCeEEEEeCCCCEEccccCCCCCccceeeecccceeeeeEEecCCCHHHHHHHHHhc-eEEEEEcCCc
Confidence            457899999999997421                        258899999988765 6788878544

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=90.20  E-value=0.12  Score=40.19  Aligned_cols=48  Identities=23%  Similarity=0.385  Sum_probs=37.8

Q ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~   98 (313)
                      ++|++.++|+.|+++|+++.++||+.+   .....++.+|+.... +.++.+
T Consensus        83 ~~pgv~~~L~~L~~~g~~~~v~Sn~~~---~~~~~l~~~gl~~~f-~~i~~s  130 (204)
T d2go7a1          83 LMPGAREVLAWADESGIQQFIYTHKGN---NAFTILKDLGVESYF-TEILTS  130 (204)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSCT---HHHHHHHHHTCGGGE-EEEECG
T ss_pred             ccchHHhhhhcccccccchhhhcccch---hhhhhhhhccccccc-cccccc
Confidence            579999999999999999999998543   344568888997655 666654

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=90.01  E-value=0.17  Score=39.60  Aligned_cols=49  Identities=24%  Similarity=0.399  Sum_probs=39.6

Q ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~   98 (313)
                      ++|++.+.+..|++.|+++.++||+.  ...+...++.+|+.... +.++++
T Consensus        96 l~~~~~~~L~~L~~~g~~~~i~tn~~--~~~~~~~l~~~gl~~~f-~~~~~~  144 (224)
T d2hsza1          96 LYPNVKETLEALKAQGYILAVVTNKP--TKHVQPILTAFGIDHLF-SEMLGG  144 (224)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSC--HHHHHHHHHHTTCGGGC-SEEECT
T ss_pred             hHHHHHHHHHHHhccCCccccccccc--HHHHHHHHHhcCchhhc-cccccc
Confidence            57999999999999999999999764  55667778999997554 666554

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=89.50  E-value=0.21  Score=39.13  Aligned_cols=49  Identities=14%  Similarity=0.154  Sum_probs=40.0

Q ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~   98 (313)
                      ++|++.++|+.|+++|+++.++||+  +...+...++.+|+.... +.++++
T Consensus        89 ~~pg~~~~l~~L~~~g~~~~i~T~~--~~~~~~~~l~~~~l~~~F-~~i~~~  137 (218)
T d1te2a_          89 LLPGVREAVALCKEQGLLVGLASAS--PLHMLEKVLTMFDLRDSF-DALASA  137 (218)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHTTCGGGC-SEEEEC
T ss_pred             ccchHHHHHHHhhhccccccccccc--cccccccccccccccccc-cccccc
Confidence            5799999999999999999999975  356677888899997544 666665

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.06  E-value=0.37  Score=37.39  Aligned_cols=23  Identities=22%  Similarity=0.564  Sum_probs=14.7

Q ss_pred             cCccHHHHHHHHHHCCC-cEEEEe
Q 021350           47 PYPGAISTLEMLATTGA-KMVVIS   69 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~-~~~~~T   69 (313)
                      ++|+|.+++++|.+.|. .+.++|
T Consensus        75 p~~gA~e~l~~L~~~~~~~v~i~t   98 (195)
T d1q92a_          75 PLPGAVEAVKEMASLQNTDVFICT   98 (195)
T ss_dssp             BCTTHHHHHHHHHHSTTEEEEEEE
T ss_pred             cccCHHHHHHHHhhccCccceEEc
Confidence            45677777777776554 455555

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.43  E-value=0.068  Score=45.17  Aligned_cols=21  Identities=14%  Similarity=0.343  Sum_probs=18.0

Q ss_pred             HHHHHHHHHHHhCCCcE-EEEc
Q 021350          172 QDLEKILEICASKKIPM-VVAN  192 (313)
Q Consensus       172 ~~~~~~l~~l~~~g~~~-i~tn  192 (313)
                      +++.+.+..|+++++++ ++|.
T Consensus       138 ~G~~e~~~~l~~~~i~~~IvSg  159 (291)
T d2bdua1         138 EGYENFFGKLQQHGIPVFIFSA  159 (291)
T ss_dssp             BTHHHHHHHHHHHTCCEEEEEE
T ss_pred             cCHHHHHHHHHHcCCeEEEEcC
Confidence            68899999999999999 6665

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=87.07  E-value=0.23  Score=44.33  Aligned_cols=43  Identities=16%  Similarity=0.279  Sum_probs=37.7

Q ss_pred             HHHHHHHhCCCCCcEEEEcCCchhhHHHHH-HcCCcEEEEcCCC
Q 021350          232 YKSAMAMVGVDACDSIAVGDSLHHDIKGAN-AAGIQSVFIIGGI  274 (313)
Q Consensus       232 ~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~-~aG~~~i~V~~G~  274 (313)
                      ...+.+.+|..-.++++|||++..||...+ ..||+|++|....
T Consensus       283 ~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~EL  326 (458)
T d2bdea1         283 AKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEEL  326 (458)
T ss_dssp             HHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTTH
T ss_pred             HHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHHH
Confidence            567778889999999999999999998886 6799999998754

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=83.81  E-value=0.58  Score=36.70  Aligned_cols=50  Identities=16%  Similarity=0.175  Sum_probs=38.8

Q ss_pred             ccCccHHHHHHHHHHCC-CcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350           46 KPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (313)
Q Consensus        46 ~~~~~a~~~l~~l~~~g-~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~   98 (313)
                      +++||+.+.|++|++.| +++.++||+.  .+.+...++.+|+.... +.++++
T Consensus        91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~--~~~~~~~l~~~gl~~~f-d~i~~~  141 (228)
T d2hcfa1          91 TLLEGVRELLDALSSRSDVLLGLLTGNF--EASGRHKLKLPGIDHYF-PFGAFA  141 (228)
T ss_dssp             EECTTHHHHHHHHHTCTTEEEEEECSSC--HHHHHHHHHTTTCSTTC-SCEECT
T ss_pred             eecCchHHHHhhhhccccccccccCCCc--chhhhhhhhhhcccccc-cccccc
Confidence            35789999999999987 7888999663  56677888999998655 655543

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=83.35  E-value=0.42  Score=38.38  Aligned_cols=50  Identities=14%  Similarity=0.048  Sum_probs=35.0

Q ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~   98 (313)
                      ++|++.+.|+.|+++|+++.++||..  .......++.+|+.....+.++++
T Consensus       100 ~~~g~~~~L~~Lk~~g~~i~i~Tn~~--~~~~~~~l~~~~l~~~f~d~~~~~  149 (257)
T d1swva_         100 PINGVKEVIASLRERGIKIGSTTGYT--REMMDIVAKEAALQGYKPDFLVTP  149 (257)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEBCSSC--HHHHHHHHHHHHHTTCCCSCCBCG
T ss_pred             cCCcHHHHHHHHHhcccceeecCCCc--hhhHHHHHHHHhhccccccccccc
Confidence            68999999999999999999999754  344445556656654332444443

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=80.80  E-value=0.71  Score=36.25  Aligned_cols=49  Identities=22%  Similarity=0.338  Sum_probs=38.0

Q ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (313)
Q Consensus        47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~   99 (313)
                      ++|++.++|+.|+ .|+++.++||+.  ...+...++.+|+.... +.++++.
T Consensus       101 ~~p~~~~~L~~l~-~~~~i~i~Sn~~--~~~~~~~l~~~gl~~~f-d~i~~s~  149 (230)
T d1x42a1         101 LYPEVVEVLKSLK-GKYHVGMITDSD--TEYLMAHLDALGIKDLF-DSITTSE  149 (230)
T ss_dssp             BCTTHHHHHHHHB-TTBEEEEEESSC--HHHHHHHHHHHTCGGGC-SEEEEHH
T ss_pred             ccccHHHHHHHhh-ccCceeeeeccc--cccchhhhccccccccc-ccccccc
Confidence            4689999999996 579999999853  55667778888987554 7777764