Citrus Sinensis ID: 021469

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310--
Protein Sequence
MGWRGGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVEKAFYSPRS
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHccccHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MGWRGGTYLTAAALSHasnhklhegtvigsfngefwgmfashQFVGNLITLAVlkddkggstsgtTLLFIVFLGVITLGTILMCFLRkeedkgeketadASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEivtpalgvsgvggaMAVYGAFDAICSLAAgrlttglpsitfIVSGGAIAQVVVFLWILINYSvtsgvlgtLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVEkafysprs
Flexible Loop (DISEMBL)
MGWRGGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQvekafysprs
Low Complexity Region (SEG)
MGWRGGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVEKAFYSPRS
Disordered region (IsUnstruct)
****GGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK**********DASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVEKAFY****
Disordered Region (DISOPRED)
MGWRGGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK*****STSGTTLLFIVFLGVITLGTILMCFLRKEE****************YLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTI***********
Disordered Region (DISEMBL)
MGWRGGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE********ADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVEKAFYSPRS
Disordered Region (DISPRO)
MGWRGGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED**********VNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVEKA******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGWRGGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVEKAFYSPRS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	312	2.2.26 [Sep-21-2011]
Q94AA1	464	UNC93-like protein 3 OS=A	no	no	0.913	0.614	0.723	1e-113
Q5SPF7	465	Protein unc-93 homolog A	yes	no	0.945	0.634	0.268	3e-18
Q6DDL7	460	Protein unc-93 homolog A	N/A	no	0.868	0.589	0.275	4e-18
Q86WB7	457	Protein unc-93 homolog A	no	no	0.887	0.606	0.283	3e-17
Q9Y115	538	UNC93-like protein OS=Dro	yes	no	0.692	0.401	0.276	2e-16
Q710D3	458	Protein unc-93 homolog A	yes	no	0.644	0.438	0.306	5e-16
A2VE54	457	Protein unc-93 homolog A	yes	no	0.868	0.592	0.267	9e-14
Q93380	705	Putative potassium channe	yes	no	0.528	0.234	0.266	2e-12
O43934	449	UNC93-like protein MFSD11	no	no	0.881	0.612	0.275	2e-11
Q5RCQ5	449	UNC93-like protein MFSD11	no	no	0.881	0.612	0.275	4e-11

>sp|Q94AA1|UN933_ARATH UNC93-like protein 3 OS=Arabidopsis thaliana GN=At3g09470 PE=2 SV=1

 Score =  408 bits (1049), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 207/286 (72%), Positives = 236/286 (82%), Gaps = 1/286 (0%)

Query: 3   WRG-GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGS 61
           W G GTYLT+ A SHA++H LHEG+VIG FNGEFW MFA HQ  GNLITLA+LKD K GS
Sbjct: 128 WVGQGTYLTSIARSHATDHGLHEGSVIGVFNGEFWAMFACHQLFGNLITLALLKDGKEGS 187

Query: 62  TSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLAD 121
           TSGTTLL +VFL  +TLGTILM F+RK + +  K    + V     L SL + I T L D
Sbjct: 188 TSGTTLLMLVFLFSMTLGTILMFFIRKIDGEDGKGPVGSPVGLVDSLASLPRMIITPLLD 247

Query: 122 VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLT 181
           +RMLLI+PL AYSGLQQAFVWAEFTKEIVTPA+GVSGVGGAMAVYGA DA+CS+ AGR T
Sbjct: 248 IRMLLIVPLLAYSGLQQAFVWAEFTKEIVTPAIGVSGVGGAMAVYGALDAVCSMTAGRFT 307

Query: 182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSA 241
           +GL SITFIVSGGA+AQ  VFLW+L+ Y  TSGVLGT YPLIMAA+LGIGDG+LNTQ+SA
Sbjct: 308 SGLSSITFIVSGGAVAQASVFLWLLLGYRQTSGVLGTAYPLIMAAILGIGDGILNTQISA 367

Query: 242 LLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVV 287
           LL +LFKHDTEGAFAQLKVWQ A+IA+VFF+ PYISLQAMLIVM+V
Sbjct: 368 LLALLFKHDTEGAFAQLKVWQSAAIAIVFFLSPYISLQAMLIVMLV 413

Arabidopsis thaliana (taxid: 3702)

>sp|Q5SPF7|UN93A_DANRE Protein unc-93 homolog A OS=Danio rerio GN=unc93a PE=3 SV=1

 Score = 92.8 bits (229), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 148/343 (43%), Gaps = 48/343 (13%)

Query: 7   TYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK-------- 58
           TYLT +       H      +I  + G F+ +F S    GNL++  +   D+        
Sbjct: 113 TYLTISGNRQGQKHNKKGQDLINQYFGIFFFIFQSSGVWGNLMSSLIFGQDQNIVPKENL 172

Query: 59  ---------------GGSTSGTTLLFIVFLGV-ITLGTILMCF-------LRKEEDKGEK 95
                          G ST  +  L    LG  I +G + + F       + ++E K E 
Sbjct: 173 EFCGVSTCLDNFTVIGNSTRPSKHLVDTLLGCYIGVGLLAIIFVAVFLDNIDRDEAK-EF 231

Query: 96  ETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG 155
            +   + +F+   ++  K +       R+LL+IPL  YSG +Q+F+  E+TK  VT ALG
Sbjct: 232 RSTKGNKSFWDTFLATFKLLRD----PRLLLLIPLTMYSGFEQSFLSGEYTKNYVTCALG 287

Query: 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGV 215
           +  VG  M  + A +++CS A GRL      I       AI  +  FL +L  +      
Sbjct: 288 IHNVGFVMICFAASNSLCSFAFGRLAQYTGRIALFCLAAAI-NLGSFLGLLY-WKPHPDQ 345

Query: 216 LGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY 275
           L   +  +  AL G+ D V  TQ +AL GILF  + E AFA  ++W+     + F    +
Sbjct: 346 LAIFF--VFPALWGMADAVWQTQTNALYGILFAKNKEAAFANYRMWESLGFVIAFAYSTF 403

Query: 276 ISLQAMLIVMVVGICVALVGILFL--------TIQVEKAFYSP 310
           I L   + + +  + + +V  L++        T QV + F  P
Sbjct: 404 ICLSTKIYIALAVLALTMVTYLYVEYNEYKHPTPQVTEDFLKP 446

Danio rerio (taxid: 7955)

>sp|Q6DDL7|UN93A_XENLA Protein unc-93 homolog A OS=Xenopus laevis GN=unc93a PE=2 SV=1

 Score = 92.4 bits (228), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 140/330 (42%), Gaps = 59/330 (17%)

Query: 7   TYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL------------ 54
           TYLT +   +A         ++  + G F+ +F S    GNLI+  +             
Sbjct: 112 TYLTESGNRYAEKKGKLAKDIVNQYFGLFFLIFQSSGVWGNLISSLIFGQNYPAGSNDSF 171

Query: 55  --------KDDKG-------GSTSGTTLLFIVFLGVIT----LGTILMCF------LRKE 89
                    D  G       G+T  T  L    LGV T    L  IL+        LR +
Sbjct: 172 TDYSQCGANDCPGTNFGNGTGTTKPTKSLIYTLLGVYTGSGVLAVILIAVFLDTINLRTD 231

Query: 90  EDK-GEKETADASVNFYSYLVSLSKSI---TTLLADVRMLLIIPLFAYSGLQQAFVWAEF 145
           + K G KE             S SK I      L D R  L+IPL  YSG +Q F+  ++
Sbjct: 232 QLKPGTKEE------------SFSKKILATVRHLKDKRQCLLIPLTMYSGFEQGFLSGDY 279

Query: 146 TKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSIT-FIVSGGAIAQVVVFLW 204
           TK  VT +LG+  VG  M  + A +A+CSL  G+L+     I  FI++  + A  V+ L 
Sbjct: 280 TKSYVTCSLGIHFVGYVMICFAATNAVCSLLFGQLSKYTGRICLFILAAVSNAACVIALL 339

Query: 205 ILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCA 264
           +   Y     V       I  A+ G+ D +  TQ +AL G+LF    E AFA  ++W+  
Sbjct: 340 LWEPYPNDFAVF-----FIFPAIWGMADAIWQTQTNALYGVLFDEHKEAAFANYRLWESL 394

Query: 265 SIAVVFFIGPYISLQAMLIVMVVGICVALV 294
              + +    ++ +   L +++  + +A+V
Sbjct: 395 GFVIAYGYSTFLCVSVKLYILLAVLLIAIV 424

Xenopus laevis (taxid: 8355)

>sp|Q86WB7|UN93A_HUMAN Protein unc-93 homolog A OS=Homo sapiens GN=UNC93A PE=2 SV=1

 Score = 89.4 bits (220), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 154/328 (46%), Gaps = 51/328 (15%)

Query: 7   TYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV---------LKDD 57
           TYLT    +HA         ++  + G F+ +F S    GNLI+  V         L ++
Sbjct: 113 TYLTITGNTHAEKAGKRGKDMVNQYFGIFFLIFQSSGVWGNLISSLVFGQTPSQETLPEE 172

Query: 58  K-----------GGSTSGTTL-----LFIVFLGVITLGTILM-----CFLRKEED-KGEK 95
           +             +T+ +T      L    LG+ T   +L       FL+   D + E 
Sbjct: 173 QLTSCGASDCLMATTTTNSTQRPSQQLVYTLLGIYTGSGVLAVLMIAAFLQPIRDVQRES 232

Query: 96  ETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG 155
           E    SV F+S L+S  K    L  D R+ L+I L  YSGLQQ F+ +E+T+  VT  LG
Sbjct: 233 EGEKKSVPFWSTLLSTFK----LYRDKRLCLLILLPLYSGLQQGFLSSEYTRSYVTCTLG 288

Query: 156 VSGVGGAMAVYGAFDAICSLAAGRLT--TGLPSITFIVSGGAIAQVVVFLWILINYSVTS 213
           +  VG  M  + A DA+CS+  G+++  TG  ++ +++  GA+  V   + +L+ +   +
Sbjct: 289 IQFVGYVMICFSATDALCSVLYGKVSQYTG-RAVLYVL--GAVTHVSCMIALLL-WRPRA 344

Query: 214 GVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIG 273
             L   +  + + L G+ D V  TQ +AL G+LF+   E AFA  ++W+     + F   
Sbjct: 345 DHLAVFF--VFSGLWGVADAVWQTQNNALYGVLFEKSKEAAFANYRLWEALGFVIAFGYS 402

Query: 274 PYISLQAMLIVMVVGICVALVGILFLTI 301
            ++ +   L +        L+G+L LT+
Sbjct: 403 MFLCVHVKLYI--------LLGVLSLTM 422

Homo sapiens (taxid: 9606)

>sp|Q9Y115|UN93L_DROME UNC93-like protein OS=Drosophila melanogaster GN=CG4928 PE=2 SV=1

 Score = 86.3 bits (212), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 5/221 (2%)

Query: 81  ILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAF 140
           I+  FL   +  GEK     S    S L  LS +   +     + L+IP+  + G++QAF
Sbjct: 261 IIAFFLDPLKRYGEKRKGSNSAAELSGLQLLSATFRQM-KKPNLQLLIPITVFIGMEQAF 319

Query: 141 VWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVV 200
           + A+FT+  V  ALGV+ +G  M  +G  +A+CS+  G +   +     IV G     VV
Sbjct: 320 IGADFTQAYVACALGVNKIGFVMICFGVVNALCSILFGSVMKYIGRTPIIVLGA----VV 375

Query: 201 VFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKV 260
            F  I +           +    M+ L G+GD V  TQ++ L G+LF+ + E AF+  ++
Sbjct: 376 HFTLITVELFWRPNPDNPIIFYAMSGLWGVGDAVWQTQINGLYGLLFRRNKEAAFSNYRL 435

Query: 261 WQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTI 301
           W+ A   + +     +  Q  L +++  + +  +G + + I
Sbjct: 436 WESAGFVIAYAYATTLCTQMKLYILLAVLTLGCIGYVIVEI 476

Drosophila melanogaster (taxid: 7227)

>sp|Q710D3|UN93A_MOUSE Protein unc-93 homolog A OS=Mus musculus GN=Unc93a PE=2 SV=1

 Score = 85.5 bits (210), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 14/215 (6%)

Query: 85  FLRKEEDK--GEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVW 142
           FL   EDK   E E        +S L+S       L  D R+ L++ L  YSG QQ F+ 
Sbjct: 221 FLESLEDKLENEGERRPRPPPLWSTLLS----TFMLFRDKRLCLLMFLPLYSGFQQEFLS 276

Query: 143 AEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAI--AQVV 200
            E+TK  VT ALG+  VG  M  + A  A+CSL  G+++           G AI  + +V
Sbjct: 277 GEYTKSYVTCALGIHFVGYVMICFSAMTALCSLLYGKISKYTGRAALYALGAAIHFSCIV 336

Query: 201 VFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKV 260
           VFL     +   +  L   +  +++ L G+ D V  TQ +AL G+LF+ + E AFA  ++
Sbjct: 337 VFLL----WHPNTNQLPVFF--VLSGLWGMSDAVWQTQNNALFGVLFEENKEPAFANYRL 390

Query: 261 WQCASIAVVFFIGPYISLQAMLIVMVVGICVALVG 295
            +     + F    ++ +   L +++  + +A+VG
Sbjct: 391 GEAIGFVIAFGYSSFLCVSTKLYILLGVLSLAMVG 425

Mus musculus (taxid: 10090)

>sp|A2VE54|UN93A_BOVIN Protein unc-93 homolog A OS=Bos taurus GN=UNC93A PE=2 SV=1

 Score = 77.8 bits (190), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 137/314 (43%), Gaps = 43/314 (13%)

Query: 6   GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLI---------TLAVLKD 56
           GTYLT      A         V+  + G F+ +F S    GNLI         T   + +
Sbjct: 112 GTYLTIVGNMQARKTGQVGKDVVSQYFGIFFLIFQSSGVWGNLISSLVFGQMPTQGTIPE 171

Query: 57  DK----------------GGSTSGTTLLFIVFLGVIT----LGTILMC-FLRKEED-KGE 94
           ++                  +   +  L    LG+ T    L  +LM  FL    D + E
Sbjct: 172 EQLQACGASDCLMATLSANSTNRPSQDLIYTLLGIYTGCGFLAVLLMAVFLEPVRDAQPE 231

Query: 95  KETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPAL 154
            E    +  F+S L+S  K +      + +LL       SG +QAF+  ++T+   T AL
Sbjct: 232 GEDEKQAPPFWSTLLSTFKLLRDKRLRLLILLP----MLSGFEQAFLSGDYTRSYTTCAL 287

Query: 155 GVSGVGGAMAVYGAFDAICSLAAGRLT--TGLPSITFIVSGGAIAQVVVFLWILINYSVT 212
           G+  VG  M  +GA DA+CS+  GRL   TG    T + + GA+ Q+   + +L+ +   
Sbjct: 288 GIQFVGYVMICFGAADALCSVLFGRLARHTGR---TVLFALGAVTQLACIIALLL-WKPH 343

Query: 213 SGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFI 272
              L   +  +  +L G+ D V  TQ +AL G+LF+ + E AFA  ++W+     + F  
Sbjct: 344 PSQLPVFF--VFPSLWGMADAVWQTQNNALFGVLFEKNKEAAFANYRLWEALGFVIAFGY 401

Query: 273 GPYISLQAMLIVMV 286
             ++ +   L V++
Sbjct: 402 STFLCVSVKLYVLL 415

Bos taurus (taxid: 9913)

>sp|Q93380|UNC93_CAEEL Putative potassium channel regulatory protein unc-93 OS=Caenorhabditis elegans GN=unc-93 PE=1 SV=4

 Score = 73.6 bits (179), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 103/180 (57%), Gaps = 15/180 (8%)

Query: 119 LADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAG 178
           L +++ +L++PL  ++GL+QAF+   +TK  V   LG+  +G  MA +G  DA+CSL  G
Sbjct: 496 LINIKFMLLVPLTIFNGLEQAFLVGVYTKAFVGCGLGIWQIGFVMACFGISDAVCSLVFG 555

Query: 179 ---RLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235
              +L   +P   F    GA+  +++ + +++ + + +      Y  ++AA+ G+ DGV 
Sbjct: 556 PLIKLFGRMPLFVF----GAVVNLLMIVTLMV-WPLNAADTQIFY--VVAAMWGMADGVW 608

Query: 236 NTQLSAL-LGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIV----MVVGIC 290
           NTQ++   + ++ +   + AF + + W+   IA+ F +  +++++  L++    +++G+C
Sbjct: 609 NTQINGFWVALVGRQSLQFAFTKYRFWESLGIAIGFALIRHVTVEIYLLITFFMLLLGMC 668

May contribute to coordination of muscle contraction as regulatory subunit of a nonessential potassium channel complex.

Caenorhabditis elegans (taxid: 6239)

>sp|O43934|MFS11_HUMAN UNC93-like protein MFSD11 OS=Homo sapiens GN=MFSD11 PE=2 SV=2

 Score = 69.7 bits (169), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 132/320 (41%), Gaps = 45/320 (14%)

Query: 28  IGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLR 87
           IG  +G FW +  S  F GNL      +     S S    +FI    +  +GT+L   +R
Sbjct: 132 IGRNSGIFWALLQSSLFFGNLYIYFAWQGKTQISESDRRTVFIALTVISLVGTVLFFLIR 191

Query: 88  KEEDK---GEKETAD--------ASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGL 136
           K + +   GE E++D        ++ N  +  V   K    L     MLL+    AY+GL
Sbjct: 192 KPDSENVLGEDESSDDQDMEVNESAQNNLTKAVDAFKKSFKLCVTKEMLLLSITTAYTGL 251

Query: 137 QQAFVWAEFTKEIVTPALGVSGVGGA-----MAVYGAFDAICSLAAGRLTTGLPSITF-- 189
           +  F        +    +G +   GA     + + G F  I  +  G L  GL S     
Sbjct: 252 ELTFF-----SGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGSLF-GLLSKNNRF 305

Query: 190 ----IVSGGAIAQVVVFLWILINY------SVTSGVLGTLY-------PLIMAALLGIGD 232
               +V  G +   + F  I +N       +   G   + Y        ++ + LLG+GD
Sbjct: 306 GRNPVVLLGILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSKEVAILCSFLLGLGD 365

Query: 233 GVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVA 292
              NTQL ++LG L+  D+  AFA  K  Q    AV FF   Y+ L   L+VMV+     
Sbjct: 366 SCFNTQLLSILGFLYSEDSAPAFAIFKFVQSICAAVAFFYSNYLLLHWQLLVMVI---FG 422

Query: 293 LVG-ILFLTIQVEKAFYSPR 311
             G I F T++ E A +  R
Sbjct: 423 FFGTISFFTVEWEAAAFVAR 442

Homo sapiens (taxid: 9606)

>sp|Q5RCQ5|MFS11_PONAB UNC93-like protein MFSD11 OS=Pongo abelii GN=MFSD11 PE=2 SV=1

 Score = 68.9 bits (167), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 131/320 (40%), Gaps = 45/320 (14%)

Query: 28  IGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLR 87
           IG  +G FW +  S  F GNL      +     S S    +FI    +  +GT+L   +R
Sbjct: 132 IGRNSGIFWALLQSSLFFGNLYVYFAWQGKTQISESDRRTVFIALTVISLVGTVLFFLIR 191

Query: 88  KEEDK---GEKETAD--------ASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGL 136
           K + +   GE E++D        ++ N  +  V   K    L     MLL+    AY+GL
Sbjct: 192 KPDSENVLGEDESSDDQDMEVNESAQNNLTKAVDAFKKSFKLCVTKEMLLLSITTAYTGL 251

Query: 137 QQAFVWAEFTKEIVTPALGVSGVGGA-----MAVYGAFDAICSLAAGRLTTGLPSITF-- 189
           +  F        +    +G     GA     + + G F  I  +  G L  GL S     
Sbjct: 252 ELTFF-----SGVYGTCIGAINKFGAEEKSLIGLSGIFIGIGEILGGSLF-GLLSKNNRF 305

Query: 190 ----IVSGGAIAQVVVFLWILINY------SVTSGVLGTLY-------PLIMAALLGIGD 232
               +V  G +   + F  I +N       +   G   + Y        ++ + LLG+GD
Sbjct: 306 GRNPVVLLGILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSKEVAILCSFLLGLGD 365

Query: 233 GVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVA 292
              NTQL ++LG L+  D+  AFA  K  Q    AV FF   Y+ L   L+VMV+     
Sbjct: 366 SCFNTQLLSILGFLYSEDSAPAFAIFKFVQSICAAVAFFYSNYLLLHWQLLVMVI---FG 422

Query: 293 LVGIL-FLTIQVEKAFYSPR 311
             G L F T++ E A +  R
Sbjct: 423 FFGTLSFFTVEWEAAAFVAR 442

Pongo abelii (taxid: 9601)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	312
359481565	444	PREDICTED: UNC93-like protein-like [Viti	0.993	0.698	0.739	1e-125
255581050	439	conserved hypothetical protein [Ricinus	0.993	0.706	0.733	1e-124
30680880	437	UNC93-like protein [Arabidopsis thaliana	0.977	0.697	0.705	1e-117
51971130	437	unnamed protein product [Arabidopsis tha	0.977	0.697	0.702	1e-117
297833712	437	hypothetical protein ARALYDRAFT_317751 [	0.977	0.697	0.712	1e-115
224087399	442	predicted protein [Populus trichocarpa]	0.987	0.696	0.721	1e-114
30680871	464	UNC93-like protein [Arabidopsis thaliana	0.913	0.614	0.723	1e-111
449530173	430	PREDICTED: UNC93-like protein 3-like [Cu	0.955	0.693	0.658	1e-105
449439988	430	PREDICTED: UNC93-like protein 3-like [Cu	0.955	0.693	0.658	1e-105
357510429	444	UNC93-like protein [Medicago truncatula]	0.990	0.695	0.642	1e-103

>gi|359481565|ref|XP_002273762.2| PREDICTED: UNC93-like protein-like [Vitis vinifera] gi|147782828|emb|CAN76819.1| hypothetical protein VITISV_029718 [Vitis vinifera] gi|297741472|emb|CBI32604.3| unnamed protein product [Vitis vinifera]

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 230/311 (73%), Positives = 264/311 (84%), Gaps = 1/311 (0%)

Query: 3   WRG-GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGS 61
           W G GTYLTA A SHA+++ LHEGTVIG+FNGEFWGMFASHQF GNLITLA+LKD   GS
Sbjct: 129 WVGQGTYLTATARSHANDNNLHEGTVIGNFNGEFWGMFASHQFAGNLITLALLKDGTKGS 188

Query: 62  TSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLAD 121
             GTTLLFIVFL  +TLGTILM FLR+ ++KGE+ + + +V FYSY VSLSKS+ T L D
Sbjct: 189 AGGTTLLFIVFLCSMTLGTILMWFLRRRDNKGEEGSLEPAVGFYSYAVSLSKSVITPLFD 248

Query: 122 VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLT 181
           VRMLLIIPLF YSGLQQAFVWAEFTK IVTPALGVSGVGG+MAV+GAFDAICSLAAGRLT
Sbjct: 249 VRMLLIIPLFVYSGLQQAFVWAEFTKYIVTPALGVSGVGGSMAVFGAFDAICSLAAGRLT 308

Query: 182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSA 241
           +GL SIT+IVSGGA AQV+V LWIL+ Y VTSGVLGT+YPL+MAA+ GIGDGV NTQ++A
Sbjct: 309 SGLLSITWIVSGGAFAQVIVLLWILLKYRVTSGVLGTIYPLLMAAIWGIGDGVFNTQINA 368

Query: 242 LLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTI 301
           L+GILFK+DTEGAFAQ KVWQ ASI+VVFF+ PYISLQAML+VM+  +  A    LFLT 
Sbjct: 369 LIGILFKNDTEGAFAQYKVWQSASISVVFFLSPYISLQAMLVVMLASLFTAFSAFLFLTH 428

Query: 302 QVEKAFYSPRS 312
           +VE+AF S  S
Sbjct: 429 KVERAFSSSTS 439

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581050|ref|XP_002531341.1| conserved hypothetical protein [Ricinus communis] gi|223529063|gb|EEF31048.1| conserved hypothetical protein [Ricinus communis]

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 228/311 (73%), Positives = 267/311 (85%), Gaps = 1/311 (0%)

Query: 3   WRG-GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGS 61
           W G GTYLT+ A SHA+++ LHEGTVIG+FNGEFWG+FA HQ VGNLI+LA+L+D  GG+
Sbjct: 129 WVGQGTYLTSTARSHAADYDLHEGTVIGNFNGEFWGVFACHQLVGNLISLAILRDGTGGT 188

Query: 62  TSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLAD 121
           TSGTTLLF VFL ++TLG ILMCFL K   KGE+   D+SV+ YS L+S SKS+   L D
Sbjct: 189 TSGTTLLFFVFLCIVTLGIILMCFLSKRVPKGEEGREDSSVSLYSSLISKSKSVIAPLLD 248

Query: 122 VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLT 181
           +RMLLIIPL AYSGLQQAFVWAEFTK+IVTPALGVSGVGG+MAVYGAFDAICSLAAGRLT
Sbjct: 249 IRMLLIIPLIAYSGLQQAFVWAEFTKDIVTPALGVSGVGGSMAVYGAFDAICSLAAGRLT 308

Query: 182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSA 241
           +GL SIT+IVS GA    +VFLWIL+ YS+TSG+LG LYPL+MAA+LG+GDGVLNTQLSA
Sbjct: 309 SGLQSITWIVSAGAFLHAIVFLWILLKYSLTSGILGVLYPLLMAAMLGVGDGVLNTQLSA 368

Query: 242 LLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTI 301
           LLGILFKHD EGAFAQLKVWQ ASIAVVFF+ PYISLQ M+++M+  + +A+ G LFLT+
Sbjct: 369 LLGILFKHDMEGAFAQLKVWQSASIAVVFFVNPYISLQTMVVIMIAALFIAVAGFLFLTL 428

Query: 302 QVEKAFYSPRS 312
           QVEKAF+SPRS
Sbjct: 429 QVEKAFFSPRS 439

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30680880|ref|NP_850546.1| UNC93-like protein [Arabidopsis thaliana] gi|51971813|dbj|BAD44571.1| unnamed protein product [Arabidopsis thaliana] gi|222423196|dbj|BAH19575.1| AT3G09470 [Arabidopsis thaliana] gi|332641250|gb|AEE74771.1| UNC93-like protein [Arabidopsis thaliana]

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 216/306 (70%), Positives = 249/306 (81%), Gaps = 1/306 (0%)

Query: 3   WRG-GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGS 61
           W G GTYLT+ A SHA++H LHEG+VIG FNGEFW MFA HQ  GNLITLA+LKD K GS
Sbjct: 128 WVGQGTYLTSIARSHATDHGLHEGSVIGVFNGEFWAMFACHQLFGNLITLALLKDGKEGS 187

Query: 62  TSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLAD 121
           TSGTTLL +VFL  +TLGTILM F+RK + +  K    + V     L SL + I T L D
Sbjct: 188 TSGTTLLMLVFLFSMTLGTILMFFIRKIDGEDGKGPVGSPVGLVDSLASLPRMIITPLLD 247

Query: 122 VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLT 181
           +RMLLI+PL AYSGLQQAFVWAEFTKEIVTPA+GVSGVGGAMAVYGA DA+CS+ AGR T
Sbjct: 248 IRMLLIVPLLAYSGLQQAFVWAEFTKEIVTPAIGVSGVGGAMAVYGALDAVCSMTAGRFT 307

Query: 182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSA 241
           +GL SITFIVSGGA+AQ  VFLW+L+ Y  TSGVLGT YPLIMAA+LGIGDG+LNTQ+SA
Sbjct: 308 SGLSSITFIVSGGAVAQASVFLWLLLGYRQTSGVLGTAYPLIMAAILGIGDGILNTQISA 367

Query: 242 LLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTI 301
           LL +LFKHDTEGAFAQLKVWQ A+IA+VFF+ PYISLQAMLIVM+V +CV+L   LFL +
Sbjct: 368 LLALLFKHDTEGAFAQLKVWQSAAIAIVFFLSPYISLQAMLIVMLVMVCVSLFSFLFLAL 427

Query: 302 QVEKAF 307
           +VE  F
Sbjct: 428 KVENVF 433

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51971130|dbj|BAD44257.1| unnamed protein product [Arabidopsis thaliana] gi|51971419|dbj|BAD44374.1| unnamed protein product [Arabidopsis thaliana]

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 215/306 (70%), Positives = 249/306 (81%), Gaps = 1/306 (0%)

Query: 3   WRG-GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGS 61
           W G GTYLT+ A SHA++H LHEG+VIG FNGEFW MFA HQ  GNLITLA+LKD K GS
Sbjct: 128 WVGQGTYLTSIARSHATDHGLHEGSVIGVFNGEFWAMFACHQLFGNLITLALLKDGKEGS 187

Query: 62  TSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLAD 121
           TSGTTLL +VFL  +TLGTILM F+RK + +  K    + V     L SL + I T L D
Sbjct: 188 TSGTTLLMLVFLFSMTLGTILMFFIRKIDGEDGKGPVGSPVGLVDSLASLPRMIITPLLD 247

Query: 122 VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLT 181
           +RMLLI+PL AYSGLQQAFVWAEFTKEIVTPA+GVSGVGGAMAVYGA DA+CS+ AGR T
Sbjct: 248 IRMLLIVPLLAYSGLQQAFVWAEFTKEIVTPAIGVSGVGGAMAVYGALDAVCSMTAGRFT 307

Query: 182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSA 241
           +GL SITFIVSGGA+AQ  VFLW+L+ Y  TSGVLGT YPLIMAA+LGIGDG+LNTQ+SA
Sbjct: 308 SGLSSITFIVSGGAVAQASVFLWLLLGYRQTSGVLGTAYPLIMAAILGIGDGILNTQISA 367

Query: 242 LLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTI 301
           LL +LFKHDTEGAFAQL+VWQ A+IA+VFF+ PYISLQAMLIVM+V +CV+L   LFL +
Sbjct: 368 LLALLFKHDTEGAFAQLRVWQSAAIAIVFFLSPYISLQAMLIVMLVMVCVSLFSFLFLAL 427

Query: 302 QVEKAF 307
           +VE  F
Sbjct: 428 KVENVF 433

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297833712|ref|XP_002884738.1| hypothetical protein ARALYDRAFT_317751 [Arabidopsis lyrata subsp. lyrata] gi|297330578|gb|EFH60997.1| hypothetical protein ARALYDRAFT_317751 [Arabidopsis lyrata subsp. lyrata]

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 218/306 (71%), Positives = 251/306 (82%), Gaps = 1/306 (0%)

Query: 3   WRG-GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGS 61
           W G GTYLT+ A SHA +H LHEG+VIG FNGEFW MFA HQ  GNLITLA+LKD K GS
Sbjct: 128 WVGQGTYLTSIARSHAKDHGLHEGSVIGVFNGEFWAMFACHQLFGNLITLALLKDGKEGS 187

Query: 62  TSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLAD 121
           TSGTTLL +VFL  +TLGTILM F+RK + +  KE   + V     LVSL + I T L D
Sbjct: 188 TSGTTLLMLVFLFSMTLGTILMFFIRKIDGEDGKEPVGSPVGLVDSLVSLPRMIITPLLD 247

Query: 122 VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLT 181
           +RMLLI+PL AYSGLQQAFVWAEFTKEIVTPA+GVSGVGGAMAVYGA DA+CS+ AGR T
Sbjct: 248 IRMLLIVPLLAYSGLQQAFVWAEFTKEIVTPAIGVSGVGGAMAVYGALDAVCSMTAGRFT 307

Query: 182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSA 241
           +GL SITFI+SGGA+AQ  VFLW+L+ Y  TSGVLGT YPLIMAA+LGIGDG+LNTQ+SA
Sbjct: 308 SGLSSITFIISGGAVAQASVFLWLLLGYRQTSGVLGTAYPLIMAAILGIGDGILNTQISA 367

Query: 242 LLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTI 301
           LL +LFKHDTEGAFAQLKVWQ A+IA+VFF+ PYISLQAMLIVM+V ICV+L+  LFL +
Sbjct: 368 LLALLFKHDTEGAFAQLKVWQSAAIAIVFFLSPYISLQAMLIVMLVMICVSLLSFLFLAL 427

Query: 302 QVEKAF 307
           +VE  F
Sbjct: 428 KVENVF 433

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224087399|ref|XP_002308151.1| predicted protein [Populus trichocarpa] gi|222854127|gb|EEE91674.1| predicted protein [Populus trichocarpa]

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 223/309 (72%), Positives = 257/309 (83%), Gaps = 1/309 (0%)

Query: 3   WRG-GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGS 61
           W G GTYLT+ A S A ++ LHEGTVIG+FNGEFWGMFASHQFVGNLI+LA+L++   GS
Sbjct: 133 WVGQGTYLTSTARSQARDYHLHEGTVIGNFNGEFWGMFASHQFVGNLISLAILRNGTEGS 192

Query: 62  TSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLAD 121
           TSGTTLLF VFL  +TLGTIL+CFL K  D GE+   D+SV+ YS L SLSKS+ T L D
Sbjct: 193 TSGTTLLFTVFLCSMTLGTILVCFLSKRVDGGEEGPKDSSVSLYSSLTSLSKSVITPLLD 252

Query: 122 VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLT 181
           VRMLLIIPL AYSGLQQAFVWAEFT++I TPALGVSGVGG+MAVYGAFD ICS  AGRLT
Sbjct: 253 VRMLLIIPLIAYSGLQQAFVWAEFTEKIATPALGVSGVGGSMAVYGAFDTICSFTAGRLT 312

Query: 182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSA 241
           +G+ SIT+IVS G   Q VVFLWIL+ YS+TSGVLG +YPL+MAA+LGIGDG +NTQLSA
Sbjct: 313 SGIFSITWIVSAGLFLQAVVFLWILLKYSLTSGVLGIVYPLLMAAMLGIGDGAINTQLSA 372

Query: 242 LLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTI 301
           LLGILFKHDTEGAFAQLKVWQ ASIAVVFFI PYISLQ M+ +M+  + VA  G L L++
Sbjct: 373 LLGILFKHDTEGAFAQLKVWQSASIAVVFFINPYISLQVMVEIMLAALFVAAGGFLVLSL 432

Query: 302 QVEKAFYSP 310
           ++EKAF SP
Sbjct: 433 RIEKAFSSP 441

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30680871|ref|NP_187558.2| UNC93-like protein [Arabidopsis thaliana] gi|67462074|sp|Q94AA1.1|UN933_ARATH RecName: Full=UNC93-like protein 3 gi|15146218|gb|AAK83592.1| AT3g09470/F11F8_4 [Arabidopsis thaliana] gi|28460681|gb|AAO43565.1| At3g09470/F11F8_4 [Arabidopsis thaliana] gi|332641249|gb|AEE74770.1| UNC93-like protein [Arabidopsis thaliana]

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 207/286 (72%), Positives = 236/286 (82%), Gaps = 1/286 (0%)

Query: 3   WRG-GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGS 61
           W G GTYLT+ A SHA++H LHEG+VIG FNGEFW MFA HQ  GNLITLA+LKD K GS
Sbjct: 128 WVGQGTYLTSIARSHATDHGLHEGSVIGVFNGEFWAMFACHQLFGNLITLALLKDGKEGS 187

Query: 62  TSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLAD 121
           TSGTTLL +VFL  +TLGTILM F+RK + +  K    + V     L SL + I T L D
Sbjct: 188 TSGTTLLMLVFLFSMTLGTILMFFIRKIDGEDGKGPVGSPVGLVDSLASLPRMIITPLLD 247

Query: 122 VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLT 181
           +RMLLI+PL AYSGLQQAFVWAEFTKEIVTPA+GVSGVGGAMAVYGA DA+CS+ AGR T
Sbjct: 248 IRMLLIVPLLAYSGLQQAFVWAEFTKEIVTPAIGVSGVGGAMAVYGALDAVCSMTAGRFT 307

Query: 182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSA 241
           +GL SITFIVSGGA+AQ  VFLW+L+ Y  TSGVLGT YPLIMAA+LGIGDG+LNTQ+SA
Sbjct: 308 SGLSSITFIVSGGAVAQASVFLWLLLGYRQTSGVLGTAYPLIMAAILGIGDGILNTQISA 367

Query: 242 LLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVV 287
           LL +LFKHDTEGAFAQLKVWQ A+IA+VFF+ PYISLQAMLIVM+V
Sbjct: 368 LLALLFKHDTEGAFAQLKVWQSAAIAIVFFLSPYISLQAMLIVMLV 413

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449530173|ref|XP_004172070.1| PREDICTED: UNC93-like protein 3-like [Cucumis sativus]

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 199/302 (65%), Positives = 252/302 (83%), Gaps = 4/302 (1%)

Query: 6   GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGT 65
           GTYLT+ A +HA  + LHEGTVIG+FNGEFWG+FASHQ +GN+I+L VLKD+ GGST+GT
Sbjct: 130 GTYLTSTARNHARKNGLHEGTVIGNFNGEFWGVFASHQVIGNIISLVVLKDEAGGSTNGT 189

Query: 66  TLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRML 125
           T+LFI+FL V+TLG +LM FLRKE+ K E+E +  S + +S ++SLSKS+   LAD RM+
Sbjct: 190 TVLFIIFLCVVTLGIVLMWFLRKEDSK-EEEPSLPSASLHSSILSLSKSVVAPLADRRMI 248

Query: 126 LIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLP 185
           L IPL AYSGLQ AFVWA+FTK++VTP+LGVSGVGGAMAVYGA DA+CSL AGRLT+GLP
Sbjct: 249 LTIPLIAYSGLQAAFVWAKFTKQVVTPSLGVSGVGGAMAVYGAADAVCSLVAGRLTSGLP 308

Query: 186 SITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGI 245
           SITF+VSGGA+ Q VVF+W+L+  S T   LGT+Y L+++A+LGIGDGV NTQL+ALLGI
Sbjct: 309 SITFLVSGGAVIQAVVFIWLLLGQSET---LGTVYLLLISAVLGIGDGVFNTQLNALLGI 365

Query: 246 LFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVEK 305
           LFKHDTEGAFAQLKVWQ A+I++VFF  PYIS+  ML++++  +C++ V  L LT+ VEK
Sbjct: 366 LFKHDTEGAFAQLKVWQSATISIVFFFSPYISMHTMLVIILSVLCLSYVAFLTLTVWVEK 425

Query: 306 AF 307
           +F
Sbjct: 426 SF 427

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439988|ref|XP_004137767.1| PREDICTED: UNC93-like protein 3-like [Cucumis sativus]

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 199/302 (65%), Positives = 252/302 (83%), Gaps = 4/302 (1%)

Query: 6   GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGT 65
           GTYLT+ A +HA  + LHEGTVIG+FNGEFWG+FASHQ +GN+I+L VLKD+ GGST+GT
Sbjct: 130 GTYLTSTARNHARKNGLHEGTVIGNFNGEFWGVFASHQVIGNIISLVVLKDEAGGSTNGT 189

Query: 66  TLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRML 125
           T+LFI+FL V+TLG +LM FLRKE+ K E+E +  S + +S ++SLSKS+   LAD RM+
Sbjct: 190 TVLFIIFLCVVTLGIVLMWFLRKEDSK-EEEPSLPSASLHSSILSLSKSVVAPLADRRMI 248

Query: 126 LIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLP 185
           L IPL AYSGLQ AFVWA+FTK++VTP+LGVSGVGGAMAVYGA DA+CSL AGRLT+GLP
Sbjct: 249 LTIPLIAYSGLQAAFVWAKFTKQVVTPSLGVSGVGGAMAVYGAADAVCSLVAGRLTSGLP 308

Query: 186 SITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGI 245
           SITF+VSGGA+ Q VVF+W+L+  S T   LGT+Y L+++A+LGIGDGV NTQL+ALLGI
Sbjct: 309 SITFLVSGGAVIQAVVFIWLLLGQSET---LGTVYLLLISAVLGIGDGVFNTQLNALLGI 365

Query: 246 LFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVEK 305
           LFKHDTEGAFAQLKVWQ A+I++VFF  PYIS+  ML++++  +C++ V  L LT+ VEK
Sbjct: 366 LFKHDTEGAFAQLKVWQSATISIVFFFSPYISMHTMLVIILSVLCLSYVAFLTLTVGVEK 425

Query: 306 AF 307
           +F
Sbjct: 426 SF 427

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357510429|ref|XP_003625503.1| UNC93-like protein [Medicago truncatula] gi|355500518|gb|AES81721.1| UNC93-like protein [Medicago truncatula]

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 201/313 (64%), Positives = 243/313 (77%), Gaps = 4/313 (1%)

Query: 3   WRG-GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGS 61
           W G GTYLT+ A SHA ++ LHEG VIG FNGEFW ++A HQF+GNLIT A+L D +GGS
Sbjct: 131 WVGQGTYLTSTAHSHAIDNNLHEGAVIGDFNGEFWAVYALHQFIGNLITFALLSDGQGGS 190

Query: 62  TSGTTLLFIVFLGVITLGTILMCFLRKE--EDKGEKETADASVNFYSYLVSLSKSITTLL 119
           T+GTTLLF+VFL V+T G ILM FL K     K E + ++A V     L SL KS+T+ L
Sbjct: 191 TNGTTLLFVVFLFVMTFGAILMFFLHKRIGNSKEEYKNSEADVVESKSLKSLCKSLTSAL 250

Query: 120 ADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGR 179
           +D +MLLIIPL AYSGLQQAFVWAEFTK +VTPA+GVSGVG AMA YGAFD ICSLAAGR
Sbjct: 251 SDAKMLLIIPLMAYSGLQQAFVWAEFTKFVVTPAIGVSGVGIAMAAYGAFDGICSLAAGR 310

Query: 180 LTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQL 239
           LT+GL SIT IVS GA AQ V  + +L+N+S++SG LGT Y L +AALLGIGDGVL TQL
Sbjct: 311 LTSGLTSITSIVSFGAFAQAVALILLLLNFSISSGFLGTSYILFLAALLGIGDGVLMTQL 370

Query: 240 SALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFL 299
           +ALLGILFKHD EGAFAQLK+WQ A+IAVVFF+ PYIS QA+ I+M+V +C++    L+L
Sbjct: 371 NALLGILFKHDMEGAFAQLKIWQSATIAVVFFLAPYISFQAVTIIMLVLLCLSFCSFLWL 430

Query: 300 TIQVEKAFYSPRS 312
            ++V  A  SP +
Sbjct: 431 ALKVGNA-SSPST 442

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	312
TAIR|locus:2074929	464	AT3G09470 "AT3G09470" [Arabido	0.913	0.614	0.723	5.1e-106
ZFIN|ZDB-GENE-041014-304	467	unc93a "unc-93 homolog A (C. e	0.740	0.494	0.317	2.8e-26
UNIPROTKB|Q86WB7	457	UNC93A "Protein unc-93 homolog	0.698	0.477	0.309	3.2e-25
FB|FBgn0027556	538	CG4928 [Drosophila melanogaste	0.740	0.429	0.257	5.5e-25
UNIPROTKB|A2VE54	457	UNC93A "Protein unc-93 homolog	0.717	0.490	0.323	1.8e-24
UNIPROTKB|F1MB34	455	F1MB34 "Uncharacterized protei	0.705	0.483	0.317	2.3e-24
DICTYBASE|DDB_G0291720	425	DDB_G0291720 [Dictyostelium di	0.830	0.609	0.320	4.1e-23
UNIPROTKB|E2QT36	456	UNC93A "Uncharacterized protei	0.669	0.458	0.308	4.2e-23
MGI|MGI:1933250	458	Unc93a "unc-93 homolog A (C. e	0.708	0.482	0.300	3.6e-22
UNIPROTKB|F1NVP3	461	UNC93A "Uncharacterized protei	0.868	0.587	0.268	1.4e-18

TAIR|locus:2074929 AT3G09470 "AT3G09470" [Arabidopsis thaliana (taxid:3702)]

 Score = 1049 (374.3 bits), Expect = 5.1e-106, P = 5.1e-106
 Identities = 207/286 (72%), Positives = 236/286 (82%)

Query:     3 WRG-GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGS 61
             W G GTYLT+ A SHA++H LHEG+VIG FNGEFW MFA HQ  GNLITLA+LKD K GS
Sbjct:   128 WVGQGTYLTSIARSHATDHGLHEGSVIGVFNGEFWAMFACHQLFGNLITLALLKDGKEGS 187

Query:    62 TSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLAD 121
             TSGTTLL +VFL  +TLGTILM F+RK + +  K    + V     L SL + I T L D
Sbjct:   188 TSGTTLLMLVFLFSMTLGTILMFFIRKIDGEDGKGPVGSPVGLVDSLASLPRMIITPLLD 247

Query:   122 VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLT 181
             +RMLLI+PL AYSGLQQAFVWAEFTKEIVTPA+GVSGVGGAMAVYGA DA+CS+ AGR T
Sbjct:   248 IRMLLIVPLLAYSGLQQAFVWAEFTKEIVTPAIGVSGVGGAMAVYGALDAVCSMTAGRFT 307

Query:   182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSA 241
             +GL SITFIVSGGA+AQ  VFLW+L+ Y  TSGVLGT YPLIMAA+LGIGDG+LNTQ+SA
Sbjct:   308 SGLSSITFIVSGGAVAQASVFLWLLLGYRQTSGVLGTAYPLIMAAILGIGDGILNTQISA 367

Query:   242 LLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVV 287
             LL +LFKHDTEGAFAQLKVWQ A+IA+VFF+ PYISLQAMLIVM+V
Sbjct:   368 LLALLFKHDTEGAFAQLKVWQSAAIAIVFFLSPYISLQAMLIVMLV 413

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-041014-304 unc93a "unc-93 homolog A (C. elegans)" [Danio rerio (taxid:7955)]

 Score = 266 (98.7 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
 Identities = 78/246 (31%), Positives = 120/246 (48%)

Query:    54 LKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSK 113
             L D   G   G  LL I+F+ V  L  I      ++E K E  +   + +F+   ++  K
Sbjct:   199 LVDTLLGCYIGVGLLAIIFVAVF-LDNI-----DRDEAK-EFRSTKGNKSFWDTFLATFK 251

Query:   114 SITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAIC 173
                 LL D R+LL+IPL  YSG +Q+F+  E+TK  VT ALG+  VG  M  + A +++C
Sbjct:   252 ----LLRDPRLLLLIPLTMYSGFEQSFLSGEYTKNYVTCALGIHNVGFVMICFAASNSLC 307

Query:   174 SLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDG 233
             S A GRL      I       AI  +  FL +L  +      L   +  +  AL G+ D 
Sbjct:   308 SFAFGRLAQYTGRIALFCLAAAI-NLGSFLGLLY-WKPHPDQLAIFF--VFPALWGMADA 363

Query:   234 VLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVAL 293
             V  TQ +AL GILF  + E AFA  ++W+     + F    +I L   + + +  + + +
Sbjct:   364 VWQTQTNALYGILFAKNKEAAFANYRMWESLGFVIAFAYSTFICLSTKIYIALAVLALTM 423

Query:   294 VGILFL 299
             V  L++
Sbjct:   424 VTYLYV 429

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q86WB7 UNC93A "Protein unc-93 homolog A" [Homo sapiens (taxid:9606)]

 Score = 257 (95.5 bits), Expect = 3.2e-25, Sum P(2) = 3.2e-25
 Identities = 72/233 (30%), Positives = 124/233 (53%)

Query:    66 TLLFIVFLGVITLGTILMC-FLRKEED-KGEKETADASVNFYSYLVSLSKSITTLLADVR 123
             TLL I + G   L  +++  FL+   D + E E    SV F+S L+S  K    L  D R
Sbjct:   202 TLLGI-YTGSGVLAVLMIAAFLQPIRDVQRESEGEKKSVPFWSTLLSTFK----LYRDKR 256

Query:   124 MLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLT-- 181
             + L+I L  YSGLQQ F+ +E+T+  VT  LG+  VG  M  + A DA+CS+  G+++  
Sbjct:   257 LCLLILLPLYSGLQQGFLSSEYTRSYVTCTLGIQFVGYVMICFSATDALCSVLYGKVSQY 316

Query:   182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSA 241
             TG  ++ +++  GA+  V   + +L+ +   +  L   +  + + L G+ D V  TQ +A
Sbjct:   317 TGR-AVLYVL--GAVTHVSCMIALLL-WRPRADHLAVFF--VFSGLWGVADAVWQTQNNA 370

Query:   242 LLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALV 294
             L G+LF+   E AFA  ++W+     + F    ++ +   L +++  + + +V
Sbjct:   371 LYGVLFEKSKEAAFANYRLWEALGFVIAFGYSMFLCVHVKLYILLGVLSLTMV 423

GO:0005886 "plasma membrane" evidence=IDA

GO:0016021 "integral to membrane" evidence=NAS

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

FB|FBgn0027556 CG4928 [Drosophila melanogaster (taxid:7227)]

 Score = 245 (91.3 bits), Expect = 5.5e-25, Sum P(2) = 5.5e-25
 Identities = 61/237 (25%), Positives = 116/237 (48%)

Query:    70 IVFLGVITLGT-ILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLII 128
             +++L  I     I+  FL   +  GEK     S    S L  LS +   +     + L+I
Sbjct:   249 MIYLSCIVAAVCIIAFFLDPLKRYGEKRKGSNSAAELSGLQLLSATFRQMKKP-NLQLLI 307

Query:   129 PLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSIT 188
             P+  + G++QAF+ A+FT+  V  ALGV+ +G  M  +G  +A+CS+  G +   +    
Sbjct:   308 PITVFIGMEQAFIGADFTQAYVACALGVNKIGFVMICFGVVNALCSILFGSVMKYIGRTP 367

Query:   189 FIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFK 248
              IV G  +   ++ + +    +  + ++   Y   M+ L G+GD V  TQ++ L G+LF+
Sbjct:   368 IIVLGAVVHFTLITVELFWRPNPDNPII--FYA--MSGLWGVGDAVWQTQINGLYGLLFR 423

Query:   249 HDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVEK 305
              + E AF+  ++W+ A   + +     +  Q  L +++  + +  +G + + I   K
Sbjct:   424 RNKEAAFSNYRLWESAGFVIAYAYATTLCTQMKLYILLAVLTLGCIGYVIVEILYRK 480

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=ISS

UNIPROTKB|A2VE54 UNC93A "Protein unc-93 homolog A" [Bos taurus (taxid:9913)]

 Score = 254 (94.5 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
 Identities = 78/241 (32%), Positives = 122/241 (50%)

Query:    66 TLLFIVFLGVITLGTILMC-FLRKEED-KGEKETADASVNFYSYLVSLSKSITTLLADVR 123
             TLL I + G   L  +LM  FL    D + E E    +  F+S L+S  K    LL D R
Sbjct:   202 TLLGI-YTGCGFLAVLLMAVFLEPVRDAQPEGEDEKQAPPFWSTLLSTFK----LLRDKR 256

Query:   124 MLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLT-- 181
             + L+I L   SG +QAF+  ++T+   T ALG+  VG  M  +GA DA+CS+  GRL   
Sbjct:   257 LRLLILLPMLSGFEQAFLSGDYTRSYTTCALGIQFVGYVMICFGAADALCSVLFGRLARH 316

Query:   182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSA 241
             TG    T + + GA+ Q+   + +L+ +      L   +  +  +L G+ D V  TQ +A
Sbjct:   317 TGR---TVLFALGAVTQLACIIALLL-WKPHPSQLPVFF--VFPSLWGMADAVWQTQNNA 370

Query:   242 LLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVM--VVGICVALVGILFL 299
             L G+LF+ + E AFA  ++W+     + F    ++ +   L V+  V+   +A  G +  
Sbjct:   371 LFGVLFEKNKEAAFANYRLWEALGFVIAFGYSTFLCVSVKLYVLLGVLSAAMAAYGAVEY 430

Query:   300 T 300
             T
Sbjct:   431 T 431

GO:0005886 "plasma membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1MB34 F1MB34 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 253 (94.1 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
 Identities = 75/236 (31%), Positives = 119/236 (50%)

Query:    71 VFLGVITLGTILMC-FLRKEED-KGEKETADASVNFYSYLVSLSKSITTLLADVRMLLII 128
             +F G   L  +LM  FL    D + E E    +  F+S L+S  K    LL D R+ L+I
Sbjct:   204 LFTGCGFLAVLLMAVFLEPVRDAQPEGEDEKQAPPFWSTLLSTFK----LLRDKRLRLLI 259

Query:   129 PLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLT--TGLPS 186
              L   SG +QAF+  ++T+   T ALG+  VG  M  +GA DA+CS+  GRL   TG   
Sbjct:   260 LLPMLSGFEQAFLSGDYTRSYTTCALGIQFVGYVMICFGAADALCSVLFGRLARHTGR-- 317

Query:   187 ITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGIL 246
              T + + GA+ Q+   + +L+ +      L   +  +  +L G+ D V  TQ +AL G+L
Sbjct:   318 -TVLFALGAVTQLACIIALLL-WKPHPSQLPVFF--VFPSLWGMADAVWQTQNNALFGVL 373

Query:   247 FKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVM--VVGICVALVGILFLT 300
             F+ + E AFA  ++W+     + F    ++ +   L V+  V+   +A  G +  T
Sbjct:   374 FEKNKEAAFANYRLWEALGFVIAFGYSTFLCVSVKLYVLLGVLSAAMAAYGAVEYT 429

GO:0005886 "plasma membrane" evidence=IEA

DICTYBASE|DDB_G0291720 DDB_G0291720 [Dictyostelium discoideum (taxid:44689)]

 Score = 269 (99.8 bits), Expect = 4.1e-23, P = 4.1e-23
 Identities = 89/278 (32%), Positives = 136/278 (48%)

Query:    26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF 85
             + IG+  G F+ +F  +Q +GNL T A++  DK G  +   +LF++FLGV  L  +    
Sbjct:   147 STIGANTGLFFALFQINQIIGNLGTAALI--DKAGLQN--EVLFLIFLGVSLLSILGFAI 202

Query:    86 LRKE---EDKGE-KETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFV 141
             L K     DKG+  E  + +++    L+S   +I         LL+ PL  YSG+ Q+F 
Sbjct:   203 LGKPVKVNDKGQIVEKENQTMSIRDRLLS---TIVLFKDRPIQLLVAPLL-YSGISQSFF 258

Query:   142 WAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVV 201
             +  F +      LG   +G  MAV+G  DA  S+  G+L+        +V          
Sbjct:   259 FGVFPQ-----LLGKEWIGYVMAVFGFCDAAGSMIMGKLSDIFGRKILVVFSTVFCISGT 313

Query:   202 FLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVW 261
              L IL++  V++      Y  I+AALLG+ D   NTQL AL+G+++    E A    K  
Sbjct:   314 VLCILLDRLVSTQSERIPYYFIVAALLGLADAGFNTQLYALIGVIYPKKGEAAAGVFKFV 373

Query:   262 QCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFL 299
             Q  + A  F  GPY +L   +I+  VG  V L  +LF+
Sbjct:   374 QSTATAAAFVYGPYATLFDNVII--VGSLVILSCVLFM 409

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|E2QT36 UNC93A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 242 (90.2 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
 Identities = 70/227 (30%), Positives = 118/227 (51%)

Query:    66 TLLFIVFLGVITLGTILMC-FLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRM 124
             TLL I + G   L  +L+  FL   +D  +K   +   +F+S L+S  K    LL D R+
Sbjct:   202 TLLGI-YTGSGVLAVLLIALFLEPIKDAQQKSEGEKKSSFWSTLLSTFK----LLRDKRL 256

Query:   125 LLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLT--T 182
              L++ L  YSG +QAF+  ++T+   T ALG+  VG  M  + A +++CS+  GRL+  T
Sbjct:   257 RLLVLLPMYSGFEQAFLAGDYTRSYTTCALGIHFVGYVMICFSATNSLCSVLYGRLSQYT 316

Query:   183 GLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSAL 242
             G  ++  +   GA+  +   + +L+ +      L   +  + + L G+ D V  TQ + L
Sbjct:   317 GRKALYGL---GAVTHLSCIVALLL-WKPHPDQLAVFF--VFSGLWGVADAVWQTQNNVL 370

Query:   243 LGILFKHDTEGAFAQLKVWQCASIAVVF----FIGPYISLQAMLIVM 285
              G+LF+ + E AFA  ++W+     + F    F+  YI L  +L V+
Sbjct:   371 YGVLFEKNKEAAFANYRLWEALGFVIAFGYSTFLCVYIKLYILLGVL 417

GO:0005886 "plasma membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1933250 Unc93a "unc-93 homolog A (C. elegans)" [Mus musculus (taxid:10090)]

 Score = 233 (87.1 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
 Identities = 70/233 (30%), Positives = 114/233 (48%)

Query:    66 TLLFIVFLGVITLGTILMC-FLRKEEDK--GEKETADASVNFYSYLVSLSKSITTLLADV 122
             TLL I + G   L  +L+  FL   EDK   E E        +S L+S       L  D 
Sbjct:   202 TLLGI-YTGCGVLAILLVAVFLESLEDKLENEGERRPRPPPLWSTLLSTFM----LFRDK 256

Query:   123 RMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTT 182
             R+ L++ L  YSG QQ F+  E+TK  VT ALG+  VG  M  + A  A+CSL  G+++ 
Sbjct:   257 RLCLLMFLPLYSGFQQEFLSGEYTKSYVTCALGIHFVGYVMICFSAMTALCSLLYGKISK 316

Query:   183 GLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSAL 242
                       G AI    + +++L  +   +  L   +  +++ L G+ D V  TQ +AL
Sbjct:   317 YTGRAALYALGAAIHFSCIVVFLL--WHPNTNQLPVFF--VLSGLWGMSDAVWQTQNNAL 372

Query:   243 LGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVG 295
              G+LF+ + E AFA  ++ +     + F    ++ +   L +++  + +A+VG
Sbjct:   373 FGVLFEENKEPAFANYRLGEAIGFVIAFGYSSFLCVSTKLYILLGVLSLAMVG 425

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISO

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1NVP3 UNC93A "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 230 (86.0 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 78/290 (26%), Positives = 135/290 (46%)

Query:     6 GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLI-TLAVLKDDKGGSTSG 64
             G  +++  LS +SN    E   I   + E  G   ++  V N   T A+ +  K  S   
Sbjct:   150 GNLISSLILSQSSNKVPTELVEISEEDLECCG---AYDCVSNTTNTTALAEPSK--SLVY 204

Query:    65 TTLLFIVFLGVITLGTILMCFLRKEEDKGEKETA-DASVNFYSYLVSLSKSITTLLADVR 123
             T L      GV+ +  I++   + + D+ E E     + +F+S  ++  +     L D R
Sbjct:   205 TLLGVYTASGVLAVLLIIIFLDQIKSDQAETEKEIQKTPSFWSTFLATFQH----LKDKR 260

Query:   124 MLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTG 183
               L+IPL  YSG +Q F+  ++TK  VT ALG+  VG  M  + A +++CSL  G+++  
Sbjct:   261 QCLLIPLTMYSGFEQGFLAGDYTKTYVTCALGIHYVGYVMICFSAVNSLCSLLFGKISQ- 319

Query:   184 LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALL 243
                  F+ +   +      + +L+ +      L   +  I  AL G+ D +  TQ + L 
Sbjct:   320 FTGRKFLFALATVTNTSCIIALLL-WKPHFNQLVVFF--IFPALWGLSDAIWQTQTNGLY 376

Query:   244 GILFKHDTEGAFAQLKVWQCASIAVVF----FIGPYISLQAMLIVMVVGI 289
             G+LF+  TE AFA  ++W+     + F     +  YI L  +L V+ + +
Sbjct:   377 GVLFEKHTEAAFANYRLWESCGFVIAFGYSTTLRVYIKLYILLAVLTLSM 426

GO:0005886 "plasma membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00023047001 SubName- Full=Putative uncharacterized protein (Chromosome chr8 scaffold_29, whole genome shotgun sequence); (444 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	312
KOG3098	461	consensus Uncharacterized conserved protein [Funct	100.0
KOG3097	390	consensus Predicted membrane protein [Function unk	99.94
TIGR00900	365	2A0121 H+ Antiporter protein.	99.29
PRK03545	390	putative arabinose transporter; Provisional	99.25
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	99.24
PRK10489	417	enterobactin exporter EntS; Provisional	99.23
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.22
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	99.19
PRK09874	408	drug efflux system protein MdtG; Provisional	99.19
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	99.18
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	99.17
TIGR00893	399	2A0114 d-galactonate transporter.	99.16
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.16
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.15
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	99.14
PRK03699	394	putative transporter; Provisional	99.12
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	99.11
PRK10213	394	nepI ribonucleoside transporter; Reviewed	99.11
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.11
PRK11902	402	ampG muropeptide transporter; Reviewed	99.1
PRK09528	420	lacY galactoside permease; Reviewed	99.1
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	99.1
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.09
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.09
TIGR00901	356	2A0125 AmpG-related permease.	99.09
PRK05122	399	major facilitator superfamily transporter; Provisi	99.07
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.07
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.07
PRK11043	401	putative transporter; Provisional	99.06
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.06
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	99.05
PRK03633	381	putative MFS family transporter protein; Provision	99.03
PRK11663	434	regulatory protein UhpC; Provisional	99.03
PRK10091	382	MFS transport protein AraJ; Provisional	99.03
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.03
TIGR00895	398	2A0115 benzoate transport.	99.02
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	99.02
PRK12307	426	putative sialic acid transporter; Provisional	99.01
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.0
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	98.98
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	98.98
TIGR00891	405	2A0112 putative sialic acid transporter.	98.97
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	98.96
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	98.95
PRK09705	393	cynX putative cyanate transporter; Provisional	98.95
PRK10473	392	multidrug efflux system protein MdtL; Provisional	98.95
PRK12382	392	putative transporter; Provisional	98.93
TIGR00898	505	2A0119 cation transport protein.	98.93
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	98.93
TIGR00892	455	2A0113 monocarboxylate transporter 1.	98.92
PRK09952	438	shikimate transporter; Provisional	98.91
PRK11652	394	emrD multidrug resistance protein D; Provisional	98.91
PRK11010	491	ampG muropeptide transporter; Validated	98.91
PRK15403	413	multidrug efflux system protein MdtM; Provisional	98.91
PF13347	428	MFS_2: MFS/sugar transport protein	98.88
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	98.87
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	98.86
PRK14995	495	methyl viologen resistance protein SmvA; Provision	98.84
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	98.84
TIGR00788	468	fbt folate/biopterin transporter. The only functio	98.84
PRK10406	432	alpha-ketoglutarate transporter; Provisional	98.83
PRK10054	395	putative transporter; Provisional	98.82
PRK11646	400	multidrug resistance protein MdtH; Provisional	98.82
PRK10642	490	proline/glycine betaine transporter; Provisional	98.82
PRK09669	444	putative symporter YagG; Provisional	98.8
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	98.8
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	98.8
PRK10429	473	melibiose:sodium symporter; Provisional	98.77
PRK15011	393	sugar efflux transporter B; Provisional	98.77
PLN00028	476	nitrate transmembrane transporter; Provisional	98.77
PRK15075	434	citrate-proton symporter; Provisional	98.76
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	98.76
TIGR00896	355	CynX cyanate transporter. This family of proteins	98.75
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	98.74
PRK03893	496	putative sialic acid transporter; Provisional	98.74
PRK10504	471	putative transporter; Provisional	98.69
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	98.66
COG2270	438	Permeases of the major facilitator superfamily [Ge	98.66
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	98.66
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	98.63
PRK11462	460	putative transporter; Provisional	98.63
PRK10207	489	dipeptide/tripeptide permease B; Provisional	98.62
PRK10133	438	L-fucose transporter; Provisional	98.62
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	98.61
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	98.58
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	98.58
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	98.54
TIGR00900	365	2A0121 H+ Antiporter protein.	98.54
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	98.5
KOG2533	495	consensus Permease of the major facilitator superf	98.49
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	98.48
KOG0569	485	consensus Permease of the major facilitator superf	98.47
PRK05122	399	major facilitator superfamily transporter; Provisi	98.43
PRK10054	395	putative transporter; Provisional	98.42
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	98.41
PRK09584	500	tppB putative tripeptide transporter permease; Rev	98.41
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	98.41
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	98.4
PRK10207	489	dipeptide/tripeptide permease B; Provisional	98.36
PRK09705	393	cynX putative cyanate transporter; Provisional	98.36
PRK10091	382	MFS transport protein AraJ; Provisional	98.35
PRK09848	448	glucuronide transporter; Provisional	98.34
PRK12382	392	putative transporter; Provisional	98.34
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	98.33
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	98.32
PRK10489	417	enterobactin exporter EntS; Provisional	98.32
PRK03545	390	putative arabinose transporter; Provisional	98.32
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	98.3
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	98.3
PRK11195	393	lysophospholipid transporter LplT; Provisional	98.29
PRK10213	394	nepI ribonucleoside transporter; Reviewed	98.29
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	98.28
PRK10473	392	multidrug efflux system protein MdtL; Provisional	98.27
TIGR00896	355	CynX cyanate transporter. This family of proteins	98.27
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	98.26
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	98.26
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	98.25
PRK15462	493	dipeptide/tripeptide permease D; Provisional	98.24
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	98.23
PRK11663	434	regulatory protein UhpC; Provisional	98.22
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	98.21
PRK03633	381	putative MFS family transporter protein; Provision	98.21
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	98.21
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	98.21
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	98.21
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	98.2
PRK11646	400	multidrug resistance protein MdtH; Provisional	98.2
PRK10133	438	L-fucose transporter; Provisional	98.2
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	98.19
TIGR00891	405	2A0112 putative sialic acid transporter.	98.18
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	98.18
TIGR00893	399	2A0114 d-galactonate transporter.	98.16
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	98.16
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	98.13
TIGR00895	398	2A0115 benzoate transport.	98.13
COG2211	467	MelB Na+/melibiose symporter and related transport	98.12
PRK10504	471	putative transporter; Provisional	98.11
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	98.1
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	98.09
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	98.07
KOG3764	464	consensus Vesicular amine transporter [Intracellul	98.06
PRK14995	495	methyl viologen resistance protein SmvA; Provision	98.06
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	98.06
TIGR00805	633	oat sodium-independent organic anion transporter.	98.05
PRK09528	420	lacY galactoside permease; Reviewed	98.05
PRK11652	394	emrD multidrug resistance protein D; Provisional	98.04
PRK15403	413	multidrug efflux system protein MdtM; Provisional	98.03
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	98.01
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	97.99
PRK09584	500	tppB putative tripeptide transporter permease; Rev	97.98
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	97.97
PRK12307	426	putative sialic acid transporter; Provisional	97.96
TIGR00897	402	2A0118 polyol permease family. This family of prot	97.95
PRK03699	394	putative transporter; Provisional	97.95
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	97.94
PRK11043	401	putative transporter; Provisional	97.93
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	97.93
TIGR00898	505	2A0119 cation transport protein.	97.92
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	97.92
KOG2504	509	consensus Monocarboxylate transporter [Carbohydrat	97.92
PRK11010	491	ampG muropeptide transporter; Validated	97.91
KOG2532	466	consensus Permease of the major facilitator superf	97.9
PRK11462	460	putative transporter; Provisional	97.89
PRK09874	408	drug efflux system protein MdtG; Provisional	97.86
PRK10077	479	xylE D-xylose transporter XylE; Provisional	97.86
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	97.86
PRK03893	496	putative sialic acid transporter; Provisional	97.84
PTZ00207	591	hypothetical protein; Provisional	97.82
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	97.81
PRK10429	473	melibiose:sodium symporter; Provisional	97.81
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	97.8
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	97.77
KOG2563	480	consensus Permease of the major facilitator superf	97.75
PRK11902	402	ampG muropeptide transporter; Reviewed	97.75
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	97.74
KOG1330	493	consensus Sugar transporter/spinster transmembrane	97.71
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	97.71
PLN00028	476	nitrate transmembrane transporter; Provisional	97.7
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	97.69
KOG3764	464	consensus Vesicular amine transporter [Intracellul	97.67
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	97.66
PRK09848	448	glucuronide transporter; Provisional	97.63
TIGR00892	455	2A0113 monocarboxylate transporter 1.	97.62
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	97.61
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	97.58
TIGR00901	356	2A0125 AmpG-related permease.	97.57
PRK09669	444	putative symporter YagG; Provisional	97.56
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	97.45
PRK15011	393	sugar efflux transporter B; Provisional	97.43
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	97.41
PRK10406	432	alpha-ketoglutarate transporter; Provisional	97.4
COG2211	467	MelB Na+/melibiose symporter and related transport	97.39
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	97.38
PF13347	428	MFS_2: MFS/sugar transport protein	97.37
KOG4686	459	consensus Predicted sugar transporter [Carbohydrat	97.37
KOG3626	735	consensus Organic anion transporter [Secondary met	97.31
TIGR00805	633	oat sodium-independent organic anion transporter.	97.31
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	97.31
KOG0254	513	consensus Predicted transporter (major facilitator	97.31
KOG0254	513	consensus Predicted transporter (major facilitator	97.29
KOG0255	521	consensus Synaptic vesicle transporter SVOP and re	97.2
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	97.16
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	97.1
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	97.07
KOG2816	463	consensus Predicted transporter ADD1 (major facili	97.04
PTZ00207	591	hypothetical protein; Provisional	97.04
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	97.03
PRK10642	490	proline/glycine betaine transporter; Provisional	97.02
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	97.0
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	96.91
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	96.88
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	96.88
KOG2615	451	consensus Permease of the major facilitator superf	96.86
PRK15075	434	citrate-proton symporter; Provisional	96.83
PRK09952	438	shikimate transporter; Provisional	96.78
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	96.77
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	96.7
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	96.64
KOG2615	451	consensus Permease of the major facilitator superf	96.63
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	96.4
KOG2532	466	consensus Permease of the major facilitator superf	96.39
KOG1330	493	consensus Sugar transporter/spinster transmembrane	96.34
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	96.28
PRK15462	493	dipeptide/tripeptide permease D; Provisional	96.16
KOG0252	538	consensus Inorganic phosphate transporter [Inorgan	95.96
KOG2325	488	consensus Predicted transporter/transmembrane prot	95.95
KOG2533	495	consensus Permease of the major facilitator superf	95.91
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	95.88
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	95.72
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	95.72
KOG0569	485	consensus Permease of the major facilitator superf	95.71
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	95.68
KOG0255	521	consensus Synaptic vesicle transporter SVOP and re	95.64
KOG2504	509	consensus Monocarboxylate transporter [Carbohydrat	95.19
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	95.09
KOG0637	498	consensus Sucrose transporter and related proteins	94.97
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	94.83
TIGR00788	468	fbt folate/biopterin transporter. The only functio	94.81
KOG3810	433	consensus Micronutrient transporters (folate trans	94.35
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	94.24
TIGR00939	437	2a57 Equilibrative Nucleoside Transporter (ENT).	94.1
KOG2563	480	consensus Permease of the major facilitator superf	94.04
KOG2325	488	consensus Predicted transporter/transmembrane prot	94.01
PF12832	77	MFS_1_like: MFS_1 like family	93.99
KOG2816	463	consensus Predicted transporter ADD1 (major facili	93.7
KOG3762	618	consensus Predicted transporter [General function	93.35
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	93.18
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	93.18
KOG0252	538	consensus Inorganic phosphate transporter [Inorgan	93.11
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	93.06
PF03219	491	TLC: TLC ATP/ADP transporter; InterPro: IPR004667	91.99
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	91.52
COG0477	338	ProP Permeases of the major facilitator superfamil	91.03
COG3202	509	ATP/ADP translocase [Energy production and convers	90.94
COG2270	438	Permeases of the major facilitator superfamily [Ge	90.4
KOG1479	406	consensus Nucleoside transporter [Nucleotide trans	90.01
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	89.99
PF03219	491	TLC: TLC ATP/ADP transporter; InterPro: IPR004667	89.5
KOG4332	454	consensus Predicted sugar transporter [Carbohydrat	89.18
KOG0253	528	consensus Synaptic vesicle transporter SV2 (major	88.91
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	88.71
COG3202	509	ATP/ADP translocase [Energy production and convers	88.63
TIGR00939	437	2a57 Equilibrative Nucleoside Transporter (ENT).	88.33
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	87.54
PF07672	267	MFS_Mycoplasma: Mycoplasma MFS transporter; InterP	87.43
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	87.01
PF13000	544	Acatn: Acetyl-coenzyme A transporter 1; InterPro:	82.36

>KOG3098 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=1.3e-36  Score=287.91  Aligned_cols=285  Identities=25%  Similarity=0.347  Sum_probs=231.2

Q ss_pred             cccceeecccchhhhhhcCCCcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCc-C-C-CC-------------ch
Q 021469            3 WRGGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG-S-T-SG-------------TT   66 (312)
Q Consensus         3 ~aqG~Ylt~~s~~~~~~~~~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~-~-~-~~-------------~~   66 (312)
                      +|||.|+|+++++          ++++||.+++|+++++|.++|+++.+++++..+.. . + ..             ..
T Consensus       121 ~GqG~ylt~~st~----------~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  190 (461)
T KOG3098|consen  121 TGQGGYLTSNSTR----------ETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIK  190 (461)
T ss_pred             cccceehhhcCCh----------hhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHH
Confidence            6899999999987          79999999999999999999999998887654411 0 1 11             23


Q ss_pred             hhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhccc
Q 021469           67 LLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFT  146 (312)
Q Consensus        67 ~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~  146 (312)
                      .++.++..+..++++...++|.++.+.+++.+     + .++++++|++.|+++||||++++|+++|+|++.+||.++||
T Consensus       191 ~~~~v~~~~~~l~~i~~~~~p~~~~~~~~~~~-----~-~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iyp  264 (461)
T KOG3098|consen  191 VLFGVLLAISVLSIINFDFLPSKDVVNCKSSS-----E-TSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYP  264 (461)
T ss_pred             HHHHHHHHHHHHHhhheeecCccchhhhhhhc-----c-ccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccc
Confidence            45666677777777777777766655544311     1 57899999999999999999999999999999999999999


Q ss_pred             cccc-ccccccc---hhhHHHHHHhHHHHHHHHHHhhhhcCCCC--hhhHHHHHHHHHHHHHHHHHhcccCCCCCCC---
Q 021469          147 KEIV-TPALGVS---GVGGAMAVYGAFDAICSLAAGRLTTGLPS--ITFIVSGGAIAQVVVFLWILINYSVTSGVLG---  217 (312)
Q Consensus       147 ~~~~-s~~lg~~---~~g~v~~~~g~~~~ig~~~~G~l~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  217 (312)
                      +++. +...+.+   ..++-+++-|++|++++...+.+.||.++  |.+++.++.++|...+++..+.+|.|.|..+   
T Consensus       265 t~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~  344 (461)
T KOG3098|consen  265 TCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDS  344 (461)
T ss_pred             hhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcc
Confidence            8875 2233433   35677788899999999999999886532  4568889999999888887778887765322   


Q ss_pred             --------chHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 021469          218 --------TLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGI  289 (312)
Q Consensus       218 --------~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l~~~~~~~il~~~~  289 (312)
                              ..+++++++++|++|+++|+++|++++..+||++.++|+++|+.|++++|++++.++..+.+.+...+.+.+
T Consensus       345 ~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~~f~~~~~~l~~~~l~~~i~~  424 (461)
T KOG3098|consen  345 PPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVAFFFSPYLLLYIYTLGLPIFC  424 (461)
T ss_pred             cccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence                    136899999999999999999999999999999999999999999999999999999988888888888777


Q ss_pred             HHHHHHHHHhhhhh
Q 021469          290 CVALVGILFLTIQV  303 (312)
Q Consensus       290 ~~~~~~~~~~~~~~  303 (312)
                      .++...++.+.++.
T Consensus       425 ~i~~~~~~~~~~~~  438 (461)
T KOG3098|consen  425 VIATTIFFIVAERT  438 (461)
T ss_pred             HHHHHHHHHHHHHH
Confidence            77777777666554

>KOG3097 consensus Predicted membrane protein [Function unknown]

Probab=99.94  E-value=1.1e-26  Score=207.12  Aligned_cols=230  Identities=30%  Similarity=0.397  Sum_probs=179.4

Q ss_pred             CccccceeecccchhhhhhcC-CCcCceeechhhHHHHHHHHhHhhhhHHhhHhh----cC----CC-CcC---------
Q 021469            1 MGWRGGTYLTAAALSHASNHK-LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL----KD----DK-GGS---------   61 (312)
Q Consensus         1 ~~~aqG~Ylt~~s~~~~~~~~-~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~----~~----~~-~~~---------   61 (312)
                      ++.++|+|+|+++++|++.++ +..+..+.+++|.||.++++.+++||+++..+.    ++    .+ +.+         
T Consensus       127 ~W~SkgtYlT~~g~~ya~~~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli~~~~~~~~~~~sn~t~~~~CG~~f~~  206 (390)
T KOG3097|consen  127 IWASKGTYLTPMGQNYANQRGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLIMTLFLHGALSGSNLTFSVECGANFCG  206 (390)
T ss_pred             ccccCcceecHHHHHHHHhhhhhccCceeeeehhHHHHHHHHHHHHHHHHHHHHHHHHhhccccCccceeeeecccccCC
Confidence            356799999999999999996 556668999999999999999999999986543    11    01 000         


Q ss_pred             ---C----------CCchhhHHHHHHHHHHHHHHHHhccC-CccccccchhhcchhhhhHHHHHHHHHHHhhcChhhHHH
Q 021469           62 ---T----------SGTTLLFIVFLGVITLGTILMCFLRK-EEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLI  127 (312)
Q Consensus        62 ---~----------~~~~~~~~if~~i~~~g~~l~lfL~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~lll  127 (312)
                         .          .+.-.+-.+|+.+++++.+++.+... ..+..++-      -...+..+.+.-++|.++|+|++++
T Consensus       207 ~g~~a~~nlt~p~~~~~lvls~i~L~c~via~~~~~~~~~~l~r~~~~r------~~~~~~l~i~~l~~~~l~~~r~~ll  280 (390)
T KOG3097|consen  207 SGDKAEGNLTLPPSYVILVLSLIFLPCMVIAVLIMLFFLGALKRYGEKR------LASVSGLNIFQLTFKHLRDIRLRLL  280 (390)
T ss_pred             ccccccCCccCCCCCceEEeeHHHHHHHHHHHHHHHHHHHHHhhhhhhh------hhcccccchHHHHHHHhcCcceeee
Confidence               0          01123456677777777766544332 22221110      1234567888999999999999999


Q ss_pred             HHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHh
Q 021469          128 IPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI  207 (312)
Q Consensus       128 ~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~  207 (312)
                      .|++.|+|++++|..++++|+++.|++|++.+|++|++||+...+.+.+.|-|.++++ |.++...+.+.|.......+ 
T Consensus       281 vP~tif~GleqaF~~~~fTk~~V~c~~Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~g-r~~~~v~gavv~l~li~~~~-  358 (390)
T KOG3097|consen  281 VPLTIFSGLEQAFLCADFTKAYVACALGVSRIGFAMACFGVGDAVASSLFGLLGKWIG-RPPLLVLGAVVHLLLITILF-  358 (390)
T ss_pred             ehhhhhhHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CccHHHHHHHHHHHHHHHHH-
Confidence            9999999999999999999999999999999999999999999999999999999998 45677788888876544333 


Q ss_pred             cccCCCCCCCchHHHHHHHHHHhhhhHHhhhhH
Q 021469          208 NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLS  240 (312)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~  240 (312)
                      .|+|.+  .|++.+++.+.+||.+|+.||++++
T Consensus       359 ~w~~~~--~~~~i~y~~aalwgv~d~vw~t~in  389 (390)
T KOG3097|consen  359 FWAPNP--QDSWIFYVAAALWGVGDAVWKTQIN  389 (390)
T ss_pred             hcccCC--CCceEEEeehhhcCccHHHHHhhcC
Confidence            687765  2456789999999999999999975

>TIGR00900 2A0121 H+ Antiporter protein

Probab=99.29  E-value=5e-10  Score=103.42  Aligned_cols=233  Identities=15%  Similarity=0.108  Sum_probs=140.8

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF  104 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~  104 (312)
                      +++|++..|+.....+.+.++|.++...+....+      .+..|.+..+..+++.++..+++.|+++++++++ .+   
T Consensus       123 ~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---  192 (365)
T TIGR00900       123 EEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLG------IKWAIWVDAVGFAISALLIVSVRIPELAASEIQA-LS---  192 (365)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHHHHHhcccccCCCccccc-cc---
Confidence            4689999999999999999999988876653221      2334444444444444444445444433211111 00   


Q ss_pred             hhHHHHHHHHHHH-hhcChhhHHHHHHHHhhhh-Hhhhhhhccccccccccc--ccchhhHHHHHHhHHHHHHHHHHhhh
Q 021469          105 YSYLVSLSKSITT-LLADVRMLLIIPLFAYSGL-QQAFVWAEFTKEIVTPAL--GVSGVGGAMAVYGAFDAICSLAAGRL  180 (312)
Q Consensus       105 ~~s~~~~~~~~~~-~~~~~~~lll~p~~~~~G~-~~~f~~~~~~~~~~s~~l--g~~~~g~v~~~~g~~~~ig~~~~G~l  180 (312)
                       +..+++.++.++ +++||+.+.+....+.... ..+......| .+..+..  +..+.|.+....+++..+++++.|++
T Consensus       193 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  270 (365)
T TIGR00900       193 -NAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFP-YVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLL  270 (365)
T ss_pred             -hhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             011122233333 5678887655544333322 2222212111 1112212  23467888889999999999999999


Q ss_pred             hcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhHHHHH
Q 021469          181 TTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLK  259 (312)
Q Consensus       181 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~afa~~~  259 (312)
                      .||++||+ ++..+..+...+....  .+.++ +   .+..++..+++|++.+..+.....++.+..|++ +.++.++.+
T Consensus       271 ~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~-~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  343 (365)
T TIGR00900       271 GRYFKRMA-LMTGAIFVIGLAILVV--GLTPP-N---FPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQF  343 (365)
T ss_pred             HHHhchhH-HHHHHHHHHHHHHHHH--Hhhch-h---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            99987664 4344433333222222  12221 1   245677889999999999998888999988754 467899999


Q ss_pred             HHHHHHHHHHHHhhhhh
Q 021469          260 VWQCASIAVVFFIGPYI  276 (312)
Q Consensus       260 ~~qs~g~ai~f~~~~~l  276 (312)
                      ..+++|..++-.+.+.+
T Consensus       344 ~~~~~~~~~g~~~~g~l  360 (365)
T TIGR00900       344 SLSHAAWPLGLILAGPL  360 (365)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999888776643

>PRK03545 putative arabinose transporter; Provisional

Probab=99.25  E-value=3.3e-09  Score=100.18  Aligned_cols=245  Identities=15%  Similarity=0.062  Sum_probs=144.2

Q ss_pred             cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcch
Q 021469           24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASV  102 (312)
Q Consensus        24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~  102 (312)
                      ++++|++..|+.......+.++|..+...+....      ..+..|.+..++.++..++. .++|++++  +++      
T Consensus       127 ~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~------gw~~~f~~~~~~~~l~~~~~~~~~~~~~~--~~~------  192 (390)
T PRK03545        127 PAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL------GWRTTFLAIGGGALITLLLLIKLLPLLPS--EHS------  192 (390)
T ss_pred             ChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh------cHHHHHHHHHHHHHHHHHHHHHhCCCCCC--CCc------
Confidence            3468999999999999999999988876654321      13556666666665554443 33443221  111      


Q ss_pred             hhhhHHHHHHHHHHHhhcChhhHHHHH-HHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhh
Q 021469          103 NFYSYLVSLSKSITTLLADVRMLLIIP-LFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGR  179 (312)
Q Consensus       103 ~~~~s~~~~~~~~~~~~~~~~~lll~p-~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~  179 (312)
                         .    ..++..+.++||+...+.- .++......... +..+. +..+..|  ....+..+..+++++++++++.|+
T Consensus       193 ---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~  263 (390)
T PRK03545        193 ---G----SLKSLPLLFRRPALVSLYLLTVVVVTAHFTAY-SYIEP-FVQQVAGLSENFATLLLLLFGGAGIIGSVLFSR  263 (390)
T ss_pred             ---c----hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-HHHHH-HHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence               0    1122345678887643322 122111111111 11111 1111122  345788888899999999999999


Q ss_pred             hhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHH
Q 021469          180 LTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLK  259 (312)
Q Consensus       180 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~  259 (312)
                      +.||+++|. +. .+..+......... ..+++     ++...+..+++|++...........+.+..|+++.++++.+.
T Consensus       264 l~dr~~~~~-~~-~~~~~~~~~~~~l~-~~~~~-----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  335 (390)
T PRK03545        264 LGNRHPSGF-LL-IAIALLLVCLLLLL-PAANS-----EWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPDATDVAMALFS  335 (390)
T ss_pred             HhhccchhH-HH-HHHHHHHHHHHHHH-HHhch-----HHHHHHHHHHHHHHHhcchHHHHHHHHHhCCCcHHHHHHHHH
Confidence            999987653 32 33322222222111 12222     234556788899988776666667777778887778899999


Q ss_pred             HHHHHHHHHHHHhhhhh----hHHHHHHHHHHHHHHHHHHHHHh
Q 021469          260 VWQCASIAVVFFIGPYI----SLQAMLIVMVVGICVALVGILFL  299 (312)
Q Consensus       260 ~~qs~g~ai~f~~~~~l----~~~~~~~il~~~~~~~~~~~~~~  299 (312)
                      ....+|.+++-.+.+.+    ....-.++..++.+++++.....
T Consensus       336 ~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  379 (390)
T PRK03545        336 GIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILI  379 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999988887754    33444455555556655554333

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=99.24  E-value=3e-09  Score=100.69  Aligned_cols=231  Identities=13%  Similarity=-0.011  Sum_probs=128.6

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcchh
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVN  103 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~~  103 (312)
                      +++|++..|+++.....+..+|.++...+....      ..+..|.+..++.++..++. .++|++++..+++++  + +
T Consensus       134 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~-~  204 (406)
T PRK11551        134 PRLRGTAVSLMYCGVPFGGALASVIGVLAAGDA------AWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGA--G-K  204 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc------CHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCc--c-h
Confidence            468999999999998888888887765443221      12445555555545444433 445654332211100  0 0


Q ss_pred             hhhHHHHHHHHHHHhhcChhhHHH-HHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhc
Q 021469          104 FYSYLVSLSKSITTLLADVRMLLI-IPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTT  182 (312)
Q Consensus       104 ~~~s~~~~~~~~~~~~~~~~~lll-~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d  182 (312)
                      ++++.++.   .++..++++...+ ...+........+ ....|.-+.....+....+.....+++++++++++.|++.|
T Consensus       205 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d  280 (406)
T PRK11551        205 QRAPVLRA---LFGEGRATATLLLWISYFFTLIVLYFL-LNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMD  280 (406)
T ss_pred             hhhhhHHH---HhhhhhhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            11111111   1111112222211 1111111111111 11111111111122346788888899999999999999999


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHHHH
Q 021469          183 GLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVW  261 (312)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~~  261 (312)
                      |+++|+ .+.+..+....++...  ...++     .+...+..++.|++....++..+.+..+.+|++. ..+.++....
T Consensus       281 r~g~~~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~  352 (406)
T PRK11551        281 RLRPRR-VVLLIYAGILASLAAL--AAAPS-----FAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAV  352 (406)
T ss_pred             HHhHHH-HHHHHHHHHHHHHHHH--HhcCc-----HHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHh
Confidence            998665 3333333333232221  12222     2335567788898888888888889999987654 6789999999


Q ss_pred             HHHHHHHHHHhhhhh
Q 021469          262 QCASIAVVFFIGPYI  276 (312)
Q Consensus       262 qs~g~ai~f~~~~~l  276 (312)
                      ..+|.+++-.+.+.+
T Consensus       353 ~~~g~~~g~~~~g~l  367 (406)
T PRK11551        353 GRLGSMAGPLLAGQL  367 (406)
T ss_pred             hhHHHHHHhhhHhhh
Confidence            999998888777654

>PRK10489 enterobactin exporter EntS; Provisional

Probab=99.23  E-value=4.7e-09  Score=99.97  Aligned_cols=227  Identities=8%  Similarity=-0.063  Sum_probs=136.1

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF  104 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~  104 (312)
                      ++++++..++.....+.+.++|..+...+.....      .+..|.+..++.++..++...+|+++++++++     +++
T Consensus       141 ~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~  209 (417)
T PRK10489        141 RENLMQAGAITMLTVRLGSVISPALGGLLIAAGG------VAWNYGLAAAGTFITLLPLLRLPALPPPPQPR-----EHP  209 (417)
T ss_pred             HHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHh------hHHHHHHHHHHHHHHHHHHHhCCCCCCCCccc-----ccc
Confidence            4678999999999999999999988866543211      12344444444445554455555432211111     011


Q ss_pred             hhHHHHHHHHHHH-hhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhh
Q 021469          105 YSYLVSLSKSITT-LLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLT  181 (312)
Q Consensus       105 ~~s~~~~~~~~~~-~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~  181 (312)
                      .    ++.++.++ .+++|....++...+......++ ...++ .+..+..|  ....|+++..++++.++++++.+++.
T Consensus       210 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p-~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~  283 (417)
T PRK10489        210 L----RSLLAGFRFLLASPVVGGIALLGGLLTMASAV-RVLYP-ALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLA  283 (417)
T ss_pred             h----HHHHHHHHHHHcChHHHHHHHHHHHHHHHHhH-HHhhH-HHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhh
Confidence            1    22222233 46677764443332222111111 11111 12222223  35678888899999999999999999


Q ss_pred             cCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhHHHHHH
Q 021469          182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKV  260 (312)
Q Consensus       182 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~afa~~~~  260 (312)
                      ||.++++ .+..+.++....+++.  ...++     .+...+..+++|++.+..+...++++.+..|++ +.+++++++.
T Consensus       284 ~~~~~~~-~l~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~  355 (417)
T PRK10489        284 HSARPGL-LMLLSTLGSFLAVGLF--GLMPM-----WILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTA  355 (417)
T ss_pred             hccCcch-HHHHHHHHHHHHHHHH--Hccch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence            9755443 3344444443333322  22222     234567788899999888888888888888865 4789999999


Q ss_pred             HHHHHHHHHHHhhhhh
Q 021469          261 WQCASIAVVFFIGPYI  276 (312)
Q Consensus       261 ~qs~g~ai~f~~~~~l  276 (312)
                      .+.+|.+++-.+.+.+
T Consensus       356 ~~~~g~~~g~~l~G~l  371 (417)
T PRK10489        356 QNVTGDAIGAALLGGL  371 (417)
T ss_pred             HHhhhHhHHHHHHHHH
Confidence            9999999999888765

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.22  E-value=8.1e-09  Score=97.96  Aligned_cols=232  Identities=13%  Similarity=0.050  Sum_probs=131.1

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHH-hccCCccccccchhhcchh
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC-FLRKEEDKGEKETADASVN  103 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~l-fL~~~~~~~~~~~~~~~~~  103 (312)
                      ++.+++..++.......+..+|..+...+....+      .+..|.+..++.++..+... .+|+++++++++       
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~------w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  198 (406)
T PRK15402        132 EADAIKITALMANVALLAPLLGPLVGAALIHVLP------WRGMFVLFAALAALSFFGLWRAMPETAGRVGEK-------  198 (406)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC------ccHHHHHHHHHHHHHHHHHHHhCCCCCcccccc-------
Confidence            3567788888888888888999888766543221      24456666666665554433 333322211111       


Q ss_pred             hhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhccccccccccccc--chhhHHHHHHhHHHHHHHHHHhhhh
Q 021469          104 FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLT  181 (312)
Q Consensus       104 ~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~--~~~g~v~~~~g~~~~ig~~~~G~l~  181 (312)
                        .+.++..++..++++||+.+.+...+...+.....+....+. +..+..|.  ...|.......++.++++.+.|++.
T Consensus       199 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~  275 (406)
T PRK15402        199 --LSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPV-ILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLT  275 (406)
T ss_pred             --ccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              011122223345678888766554433333222122111111 11111222  3456776777778899999999999


Q ss_pred             cCCCChhhHHHHHHHHHHHHHHHHHh-cccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHH
Q 021469          182 TGLPSITFIVSGGAIAQVVVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKV  260 (312)
Q Consensus       182 d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~  260 (312)
                      ||+++|+ .+.++.++......+... ...+..   .+++.++..+++|++.+...+..+...-...++++.++.+++.+
T Consensus       276 ~r~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  351 (406)
T PRK15402        276 SRRPLRS-LIRMGLWPMVAGLLLAALATVISSH---AYLWLTAGLSLYAFGIGLANAGLYRLTLFSSDVSKGTVSAAMGM  351 (406)
T ss_pred             HhcCHHH-HHHHHHHHHHHHHHHHHHHHHcccc---cHHHHHHHHHHHHHHHHHHhhhHHHHHhhhccccccHHHHHHHH
Confidence            9998665 444555554433332221 111111   12345566778888888766665554433344556689999999


Q ss_pred             HHHHHHHHHHHhhhhh
Q 021469          261 WQCASIAVVFFIGPYI  276 (312)
Q Consensus       261 ~qs~g~ai~f~~~~~l  276 (312)
                      .+.+|.+++-.+...+
T Consensus       352 ~~~~~~~~g~~~~~~l  367 (406)
T PRK15402        352 LSMLIFTVGIELSKHA  367 (406)
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            9999998888877754

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=99.19  E-value=2.5e-09  Score=98.98  Aligned_cols=229  Identities=14%  Similarity=0.075  Sum_probs=131.5

Q ss_pred             ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcchhh
Q 021469           26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNF  104 (312)
Q Consensus        26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~~~  104 (312)
                      ++|++..+++......+.++++.+...+....      ..+..|.+..++.++..+.. .++++|++++++++++.+ ++
T Consensus       122 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  194 (377)
T TIGR00890       122 DKRGLASGIIIGGYGLGSFILSPLITSVINLE------GVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIEVS-VK  194 (377)
T ss_pred             cccHHHHHHHHHhcchhHhHHHHHHHHHHhcc------cHHHHHHHHHHHHHHHHHHHHHheecCchhccccCcccc-hh
Confidence            56899999998888888877665443333211      13455666665555555444 445544433221111100 01


Q ss_pred             hhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhhc
Q 021469          105 YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTT  182 (312)
Q Consensus       105 ~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~d  182 (312)
                             -++..+.++||+..++...++...+......+..+. +. ..+|  .+..+.....++++.+++..+.|++.|
T Consensus       195 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d  265 (377)
T TIGR00890       195 -------DYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKP-YG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSD  265 (377)
T ss_pred             -------hhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHH-HH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                   112345677887765554433332222222121111 11 1122  345677888899999999999999999


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhHHHHHHH
Q 021469          183 GLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVW  261 (312)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~afa~~~~~  261 (312)
                      |++||+ .+.++.++...+..+..  +.++.   +....+...++.|++.+..++..+.+..+.+|++ +.++++++...
T Consensus       266 r~g~~~-~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  339 (377)
T TIGR00890       266 KIGRQK-TMSIVFGISAVGMAAML--FIPML---NDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTA  339 (377)
T ss_pred             HHhhhh-hhhHHHHHHHHHHHHHH--Hcccc---hhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHH
Confidence            998765 44455444444433322  11211   1122334456677777776777777888888754 46789999999


Q ss_pred             HHHHHHHHHHhhhhh
Q 021469          262 QCASIAVVFFIGPYI  276 (312)
Q Consensus       262 qs~g~ai~f~~~~~l  276 (312)
                      ..+|.+++-.+.+.+
T Consensus       340 ~~~g~~~~~~~~g~l  354 (377)
T TIGR00890       340 KAVAGIFGGLIASHA  354 (377)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999998888776654

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.19  E-value=9.4e-09  Score=97.07  Aligned_cols=249  Identities=16%  Similarity=0.127  Sum_probs=142.0

Q ss_pred             cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcch
Q 021469           24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASV  102 (312)
Q Consensus        24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~  102 (312)
                      ++++|++..|+.....+.+.++|..+...+....+      .+..|.+..++.+++.++. ++++++.++.+++      
T Consensus       136 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  203 (408)
T PRK09874        136 PRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYG------LRPVFFITASVLFLCFLVTLFCIRENFQPVSKK------  203 (408)
T ss_pred             CHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------HHHHHHHHHHHHHHHHHHHHHHhccCcccccch------
Confidence            34678999999998889999888888766543211      2445666666666555544 3444432221111      


Q ss_pred             hhhhHHHHHHHHHHHhhcChhhHH-HHHHHHhhhhHhhhhhhc---cccccccccccc--chhhHHHHHHhHHHHHHHHH
Q 021469          103 NFYSYLVSLSKSITTLLADVRMLL-IIPLFAYSGLQQAFVWAE---FTKEIVTPALGV--SGVGGAMAVYGAFDAICSLA  176 (312)
Q Consensus       103 ~~~~s~~~~~~~~~~~~~~~~~ll-l~p~~~~~G~~~~f~~~~---~~~~~~s~~lg~--~~~g~v~~~~g~~~~ig~~~  176 (312)
                       ++    .+.++..+.+++++.++ +.-..+......+.....   |.+..... .+.  ...|.+..+.+++.+++...
T Consensus       204 -~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~l~~~~~~~~  277 (408)
T PRK09874        204 -EM----LHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGN-VSNIAFISGMIASVPGVAALLSAPR  277 (408)
T ss_pred             -hh----hHHHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHHHHHHHH
Confidence             01    11234456678888643 222222222222111111   11111000 000  12355556678888899999


Q ss_pred             HhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhH
Q 021469          177 AGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAF  255 (312)
Q Consensus       177 ~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~af  255 (312)
                      .|++.||++||+ .+..+..+.....+..  .+.++     ++..++..+++|++++.........+....+++ ..+++
T Consensus       278 ~g~l~dr~g~~~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~  349 (408)
T PRK09874        278 LGKLGDRIGPEK-ILITALIFSVLLLIPM--SFVQT-----PLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIF  349 (408)
T ss_pred             HHHHHhccccch-hHHHHHHHHHHHHHHH--HHhcc-----HHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeee
Confidence            999999998765 4344444433332221  12222     244567778899999998888887777666644 36789


Q ss_pred             HHHHHHHHHHHHHHHHhhhhh----hHHHHHHHHHHHHHHHHHHHHH
Q 021469          256 AQLKVWQCASIAVVFFIGPYI----SLQAMLIVMVVGICVALVGILF  298 (312)
Q Consensus       256 a~~~~~qs~g~ai~f~~~~~l----~~~~~~~il~~~~~~~~~~~~~  298 (312)
                      +++...+.+|.+++-.+...+    ....-+.+..++.+++.+....
T Consensus       350 ~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~  396 (408)
T PRK09874        350 SYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN  396 (408)
T ss_pred             hHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence            999999999999988887754    2333344444555555554433

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=99.18  E-value=1.4e-08  Score=94.85  Aligned_cols=223  Identities=16%  Similarity=0.050  Sum_probs=126.1

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHh-ccCCccccccchhhcchh
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF-LRKEEDKGEKETADASVN  103 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lf-L~~~~~~~~~~~~~~~~~  103 (312)
                      +++|++..|+.....+.+..+|..+...+....+      .+..|.+..++..+..++..+ +|+++++++++       
T Consensus       124 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  190 (385)
T TIGR00710       124 GEELSRIYSILMPVLALAPAVAPLLGGYILVWLS------WHAIFAFLSLAGILLSALIFFILPETLPYEARI-------  190 (385)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC------HHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccC-------
Confidence            4679999999999999999999988876554221      244555555555555544433 33332221111       


Q ss_pred             hhhHHHHHHHHHHHhhcChhhHHHHHHH-HhhhhHhhhhhhccccccccccc--ccchhhHHHHHHhHHHHHHHHHHhhh
Q 021469          104 FYSYLVSLSKSITTLLADVRMLLIIPLF-AYSGLQQAFVWAEFTKEIVTPAL--GVSGVGGAMAVYGAFDAICSLAAGRL  180 (312)
Q Consensus       104 ~~~s~~~~~~~~~~~~~~~~~lll~p~~-~~~G~~~~f~~~~~~~~~~s~~l--g~~~~g~v~~~~g~~~~ig~~~~G~l  180 (312)
                      +.   ++..++..+.+++|+.+.+.-.. +..+...++. ...+. +..+..  +.+..|++....+++.++++.+.|++
T Consensus       191 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l  265 (385)
T TIGR00710       191 QI---STYFETFLLLLKSKMFWGYALIYGASFGGFFAFF-SGAPF-VYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRF  265 (385)
T ss_pred             CH---HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHH-HcChH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            01   11223334567788875544322 1111111111 11111 111112  23467888888999999999999999


Q ss_pred             hcCCCChhhHHHHHHHHHHHHHHHHHh-cccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHH
Q 021469          181 TTGLPSITFIVSGGAIAQVVVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLK  259 (312)
Q Consensus       181 ~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~  259 (312)
                      .||+++|+.+ ..+.++......+... ..++..   .........++.|++.+...........+..|++..++.++++
T Consensus       266 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  341 (385)
T TIGR00710       266 IKKWGAKSLL-RMGLILFAVSAVLLEITAILGLG---SWAMIIGPMMFVGIGNSMISSIAMAYALEDFPHVAGTASALFG  341 (385)
T ss_pred             HHhcCHHHHH-HHHHHHHHHHHHHHHHHHHhccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHH
Confidence            9999876533 3444333333222211 111111   0123455677788888888777777777777776677888888


Q ss_pred             HHHHHHHHHH
Q 021469          260 VWQCASIAVV  269 (312)
Q Consensus       260 ~~qs~g~ai~  269 (312)
                      ..+..+.++.
T Consensus       342 ~~~~~~g~i~  351 (385)
T TIGR00710       342 TLRLVLGAIV  351 (385)
T ss_pred             HHHHHHHHHH
Confidence            7765544433

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=99.17  E-value=1.5e-08  Score=95.14  Aligned_cols=224  Identities=16%  Similarity=0.125  Sum_probs=146.2

Q ss_pred             CcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcc
Q 021469           23 HEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADAS  101 (312)
Q Consensus        23 ~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~  101 (312)
                      -.+++|+|..|+...-..++.++|--+..++=..-      ..+..|.+..+++.+..+.. ..+|+++.+++.+     
T Consensus       130 vpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~------GWR~~F~~ia~l~ll~~~~~~~~lP~~~~~~~~~-----  198 (394)
T COG2814         130 VPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF------GWRATFLAIAVLALLALLLLWKLLPPSEISGSLP-----  198 (394)
T ss_pred             cCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHh------hHHHHHHHHHHHHHHHHHHHHHhCCCccCCCCCC-----
Confidence            35689999999999999999999887776652211      13566766666666665554 4455122222111     


Q ss_pred             hhhhhHHHHHHHHHHHhhcChhhHH--HHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHH
Q 021469          102 VNFYSYLVSLSKSITTLLADVRMLL--IIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAA  177 (312)
Q Consensus       102 ~~~~~s~~~~~~~~~~~~~~~~~ll--l~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~  177 (312)
                              .++++.++++++|+.+.  ++-.+.+.|.+..|-+   -+-+..+.-|  .+.+++++..||++.++|+++.
T Consensus       199 --------~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftY---i~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~g  267 (394)
T COG2814         199 --------GPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTY---IRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLG  267 (394)
T ss_pred             --------cchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHh---HHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHH
Confidence                    22345578889999743  4444555665544432   1111122223  3568999999999999999999


Q ss_pred             hhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHH
Q 021469          178 GRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQ  257 (312)
Q Consensus       178 G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~  257 (312)
                      |++.|| +.|+ .+.....+....... +..++.+     ++...+..++||+....-......-++...||+.+.+.++
T Consensus       268 Grl~dr-~~~~-~l~~~~~l~a~~~l~-l~~~~~~-----~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl  339 (394)
T COG2814         268 GRLADR-GPRR-ALIAALLLLALALLA-LTFTGAS-----PALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSL  339 (394)
T ss_pred             hhhccc-cchh-HHHHHHHHHHHHHHH-HHHhcch-----HHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHH
Confidence            999999 5444 333443444444332 2233322     2456777777999887776666666666678888889999


Q ss_pred             HHHHHHHHHHHHHHhhhhh
Q 021469          258 LKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       258 ~~~~qs~g~ai~f~~~~~l  276 (312)
                      +....++|.+++-.+...+
T Consensus       340 ~~aa~nlgia~GA~lGG~v  358 (394)
T COG2814         340 NVAAFNLGIALGAALGGLV  358 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999998888864

>TIGR00893 2A0114 d-galactonate transporter

Probab=99.16  E-value=2.7e-09  Score=99.09  Aligned_cols=261  Identities=12%  Similarity=-0.005  Sum_probs=136.8

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHh-ccCCcccccc-c--hhhc
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF-LRKEEDKGEK-E--TADA  100 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lf-L~~~~~~~~~-~--~~~~  100 (312)
                      +++|++..|+.....+.+.++|..+...+....+      .+..|.+..++.++..++..+ +++++++++. +  +++.
T Consensus       113 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (399)
T TIGR00893       113 ASERATAVSIFNSAQGLGGIIGGPLVGWILIHFS------WQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYI  186 (399)
T ss_pred             HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCC------chHHHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhh
Confidence            4689999999999999999999988876654321      244565555555554444433 4433221110 0  0000


Q ss_pred             chh-------hhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHH
Q 021469          101 SVN-------FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDA  171 (312)
Q Consensus       101 ~~~-------~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~  171 (312)
                      ..+       ++....+.-++..+.+++|+.+.+....+.............+ .+..+..|  ....+......+++++
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (399)
T TIGR00893       187 VVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFP-TYLVQERGLSILEAGFMASLPGIVGF  265 (399)
T ss_pred             cchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHH-HHHHHHhcccHHHhhHHHHHHHHHHH
Confidence            000       0000001112344567888876555444333332222222111 11112223  2456788888999999


Q ss_pred             HHHHHHhhhhcCCCChhhHHHHHHHHHHHH---HHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhcc
Q 021469          172 ICSLAAGRLTTGLPSITFIVSGGAIAQVVV---FLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFK  248 (312)
Q Consensus       172 ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~  248 (312)
                      ++..+.|++.||++||+.............   ...........+    ..+..+.....+......+...+.++.+.+|
T Consensus       266 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (399)
T TIGR00893       266 IGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVN----IPYAALALVALGFFGLGAGAIGWALISDNAP  341 (399)
T ss_pred             HHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccch----hHHHHHHHHHHHHhchhhhhHHHHHHHhhcC
Confidence            999999999999876631111111111111   111111111110    1122333333333333367888888989887


Q ss_pred             CC-hhhhHHHHHHHHHHHHHHHHHhhhhh----h-HHHHHHHHHHHHHHHHHHH
Q 021469          249 HD-TEGAFAQLKVWQCASIAVVFFIGPYI----S-LQAMLIVMVVGICVALVGI  296 (312)
Q Consensus       249 ~~-~~~afa~~~~~qs~g~ai~f~~~~~l----~-~~~~~~il~~~~~~~~~~~  296 (312)
                      ++ +..++++....+.+|..++-.+.+.+    . ....+.+..+..+++.+.+
T Consensus       342 ~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~  395 (399)
T TIGR00893       342 GNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY  395 (399)
T ss_pred             hhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence            54 46799999999999999988777654    2 2333333334444444443

>TIGR00897 2A0118 polyol permease family

Probab=99.16  E-value=2e-08  Score=95.31  Aligned_cols=233  Identities=16%  Similarity=0.109  Sum_probs=122.7

Q ss_pred             CceeechhhHHHHHHHHhH-hhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHh-ccCCccccccchhhcch
Q 021469           25 GTVIGSFNGEFWGMFASHQ-FVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF-LRKEEDKGEKETADASV  102 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~-iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lf-L~~~~~~~~~~~~~~~~  102 (312)
                      +++|++..|+.....+.+. ++|..+...+....+     .....+ ....+..++.++.++ ++++.++++++ +   .
T Consensus       136 ~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~  205 (402)
T TIGR00897       136 QDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG-----EMNTLW-SALAFVLTGGVIALFSNKDIFTPQHMQ-T---R  205 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-----hHHHHH-HHHHHHHHHHHHHHhccCCCCCccccc-C---C
Confidence            4679999999999988886 577776544332111     011111 112222333333333 33322111111 0   0


Q ss_pred             hhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhh-Hhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhh
Q 021469          103 NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGL-QQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGR  179 (312)
Q Consensus       103 ~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~-~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~  179 (312)
                      ++..+.++   ....+++||+.+++....+.... ..++. ...| .+... .|  ..+.+.+....+++..+++.+.|+
T Consensus       206 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p-~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~  279 (402)
T TIGR00897       206 EKFSELGK---AATILFTNPNVLLGGMVRIINTIGLFGFA-VFLP-MFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGI  279 (402)
T ss_pred             cchhhHHH---HHHHHHcChhHHHHHHHHHHHHHHHHHHH-HHHH-HHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence            11111122   22346789987655433222111 11111 1111 12111 23  244567777888999999999999


Q ss_pred             hhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHH
Q 021469          180 LTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLK  259 (312)
Q Consensus       180 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~  259 (312)
                      +.||++||++....+.+.......... ..+.... ...+..++..+++|++.+.+... .+++.+..|+++..++++.+
T Consensus       280 l~dr~~~~~~~~~~~~l~~~~~~~~l~-~~~~~~~-~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~~~~g~~~g~~~  356 (402)
T TIGR00897       280 VGDKLGWMNTVRWFGGVGCGIFTLALY-YIPQHFG-HSFAVALIIAIALGIFLAGYVPL-AAVFPTLAPKHKGAAMSVLN  356 (402)
T ss_pred             HHHhhcchhHHHHHHHHHHHHHHHHHH-HHHHccC-CcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCcchhHHHHHHHH
Confidence            999998765443232222221111111 1111000 01234556778888887776543 45666667777778999999


Q ss_pred             HHHHHHHHHHHHhhhhh
Q 021469          260 VWQCASIAVVFFIGPYI  276 (312)
Q Consensus       260 ~~qs~g~ai~f~~~~~l  276 (312)
                      ..+.+|..++-.+.+.+
T Consensus       357 ~~~~lg~~~gp~i~g~l  373 (402)
T TIGR00897       357 LSAGLSAFLAPAIAVLF  373 (402)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999988887776654

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.15  E-value=2e-08  Score=93.90  Aligned_cols=230  Identities=11%  Similarity=0.037  Sum_probs=119.4

Q ss_pred             cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcch
Q 021469           24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASV  102 (312)
Q Consensus        24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~  102 (312)
                      ++++|++..++.......+.++|.++...+....+      .+..|.+..++.+++.++. .++|++.++++++      
T Consensus       109 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  176 (377)
T PRK11102        109 PKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFS------WHAIFWVLALAAILAAALVFFFIPETLPKERRQ------  176 (377)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC------hHHHHHHHHHHHHHHHHHHHHhCCccCcccccC------
Confidence            34679999999999999999999988765543211      2455666666666655443 4455433222111      


Q ss_pred             hhhhHHHHHHHHHHHhhcChhhHHHHHHHHhh-hhHhhhhhhcccccccc-cccccchhhHHHHHHhHHHHHHHHHHhhh
Q 021469          103 NFYSYLVSLSKSITTLLADVRMLLIIPLFAYS-GLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRL  180 (312)
Q Consensus       103 ~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~-G~~~~f~~~~~~~~~~s-~~lg~~~~g~v~~~~g~~~~ig~~~~G~l  180 (312)
                        +...+++.++..+.+++|+.+......... .....+.. ..+..+.. .....++.|++....+++.++++++.|++
T Consensus       177 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l  253 (377)
T PRK11102        177 --PFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLT-AGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRF  253 (377)
T ss_pred             --CCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              111223334445677888865443322211 11122211 11111110 11223567888889999999999999999


Q ss_pred             hcCCCChhhHHHHHHHHHHHH-HHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHH
Q 021469          181 TTGLPSITFIVSGGAIAQVVV-FLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLK  259 (312)
Q Consensus       181 ~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~  259 (312)
                      .||+++|+ .+..+.++.... .........+..    .+...+...+++.+.+.........+.+..|++...+.+...
T Consensus       254 ~~r~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  328 (377)
T PRK11102        254 VRRVGALN-MLRFGLWIQFIMGIWLVVSALLDLG----FWALVVGVAAFVGCVSMISSNAMAVILDEFPHMAGTASSLAG  328 (377)
T ss_pred             HHHhCHHH-HHHHHHHHHHHHHHHHHHHHHHhhh----HHHHHHHHHHHHHHHHHhhHHHHHHHhccccccchHHHHHHH
Confidence            99998765 434444332221 111111111110    122222333344444444444444555556666656677665


Q ss_pred             HHH-HHHHHHHHHhh
Q 021469          260 VWQ-CASIAVVFFIG  273 (312)
Q Consensus       260 ~~q-s~g~ai~f~~~  273 (312)
                      ... ++|..++-...
T Consensus       329 ~~~~~~g~~~g~~~~  343 (377)
T PRK11102        329 TLRFGIGAIVGALLS  343 (377)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            543 34554444443

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=99.14  E-value=4.3e-08  Score=95.38  Aligned_cols=270  Identities=16%  Similarity=0.168  Sum_probs=160.7

Q ss_pred             eechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCC-C-chhhHH-HHHHHHHHHHHHHHhccCCccccc-cchhhcchh
Q 021469           28 IGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTS-G-TTLLFI-VFLGVITLGTILMCFLRKEEDKGE-KETADASVN  103 (312)
Q Consensus        28 ~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~-~-~~~~~~-if~~i~~~g~~l~lfL~~~~~~~~-~~~~~~~~~  103 (312)
                      ++|-+|.=|++-..|.++--++...+....++..++ . .+..+. +=.--.+.+.+.++++|++++.+. +...+   .
T Consensus       186 ~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~---~  262 (477)
T PF11700_consen  186 RGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSS---Y  262 (477)
T ss_pred             hchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchh---H
Confidence            499999999999988888777776665433321111 1 122221 112223456666777776654221 11110   1


Q ss_pred             hhhHHHHHHHHHHHh-hcChhhHH-HHHHHHh-hhhHhhhhh-hccccccccccccc--chhhHHHHHHhHHHHHHHHHH
Q 021469          104 FYSYLVSLSKSITTL-LADVRMLL-IIPLFAY-SGLQQAFVW-AEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAA  177 (312)
Q Consensus       104 ~~~s~~~~~~~~~~~-~~~~~~ll-l~p~~~~-~G~~~~f~~-~~~~~~~~s~~lg~--~~~g~v~~~~g~~~~ig~~~~  177 (312)
                      -..++ +++.+++|. -+.|++.. |+-.++| -|+..-... +.|.+.    .+|.  .++..+.++..+..++|+++.
T Consensus       263 ~~~g~-~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~----~lg~s~~~l~~~~l~~~i~a~~Ga~~~  337 (477)
T PF11700_consen  263 LRFGF-KRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATE----VLGMSTTQLIVFGLVVQIVAIIGALLF  337 (477)
T ss_pred             HHHHH-HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence            12233 334445553 44555432 2222333 343322222 234332    2232  345566667788899999999


Q ss_pred             hhhhcCCCCh--hhHHHHHHHHHHHHHHHHHhcccCCC-CCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hh
Q 021469          178 GRLTTGLPSI--TFIVSGGAIAQVVVFLWILINYSVTS-GVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EG  253 (312)
Q Consensus       178 G~l~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~  253 (312)
                      |++.||++.|  +.+ .+..++....-++.++-..++. ...+++-.+++++++|+.-+..|...-++++++-|+++ .+
T Consensus       338 g~l~~r~g~k~~~~l-~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~e  416 (477)
T PF11700_consen  338 GWLQDRFGPKTKRTL-LISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAE  416 (477)
T ss_pred             HHHHHHhCCchhHHH-HHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhH
Confidence            9999999865  433 3333333222122222111111 11223558899999999999999999999999998766 47


Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhh-----hHHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 021469          254 AFAQLKVWQCASIAVVFFIGPYI-----SLQAMLIVMVVGICVALVGILFLTIQVEKA  306 (312)
Q Consensus       254 afa~~~~~qs~g~ai~f~~~~~l-----~~~~~~~il~~~~~~~~~~~~~~~~~~~~~  306 (312)
                      .|++|.+..=.++.++=++-+.+     +.+..+..+.++++++++.+..++..+.|+
T Consensus       417 fFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~~g~~  474 (477)
T PF11700_consen  417 FFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDVEKGRE  474 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccchhhhh
Confidence            89999999888888886655533     356678888899999999998887766655

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>PRK03699 putative transporter; Provisional

Probab=99.12  E-value=1.6e-08  Score=95.67  Aligned_cols=243  Identities=14%  Similarity=0.027  Sum_probs=126.2

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF  104 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~  104 (312)
                      +++|++..+........+..++..+...+....     ...+..|.+..++.++..++.++.+.|+.++++++++    +
T Consensus       126 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-----~gw~~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~----~  196 (394)
T PRK03699        126 GKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARS-----IEWYWVYACIGLVYVAIFILTLFSEFPALGKHAPKAD----K  196 (394)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----ccHHHHHHHHHHHHHHHHHHHHhcCCccccccCcccc----C
Confidence            356888888887778888878777665443211     1134556555555555444444444343222111000    0


Q ss_pred             hhHHHHHHHHHHHhhcChhhHHHHH-HHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhh
Q 021469          105 YSYLVSLSKSITTLLADVRMLLIIP-LFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLT  181 (312)
Q Consensus       105 ~~s~~~~~~~~~~~~~~~~~lll~p-~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~  181 (312)
                           ++    .+...+++..++.- .+++...+.++. +-.| .+..+..|  .++.+.+..+++++.++|.++.|++.
T Consensus       197 -----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p-~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~  265 (394)
T PRK03699        197 -----PV----AKEKWGIGVLFLAIAALLYILAQLTFI-SWVP-EYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIV  265 (394)
T ss_pred             -----cc----ccccCChHHHHHHHHHHHHHHHHHHHH-HHHH-HHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence                 00    11112344332221 222222222221 1111 12222223  34567788888999999999999999


Q ss_pred             cCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHH
Q 021469          182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVW  261 (312)
Q Consensus       182 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~  261 (312)
                      ||+++|+.+. ....+......+ + ...++     +....+..+.+|++-+...+...+...+..|++.+...+.....
T Consensus       266 dr~~~~~~l~-~~~~~~~~~~~~-~-~~~~~-----~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  337 (394)
T PRK03699        266 RFFDLQRILT-VLAGLALVLMYL-F-VNTDD-----PSHLLYAILGLGFFSSAIYTTIITLGSQQTKVASPKLVNFILTC  337 (394)
T ss_pred             HHhchhhHHH-HHHHHHHHHHHH-H-HHcCC-----chHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHh
Confidence            9998765333 222222222211 1 12222     12344566778887666666666666666676655667777777


Q ss_pred             HHHHHHHHHHhhhhh----hHHHHHHHHHHHHHHHHHH
Q 021469          262 QCASIAVVFFIGPYI----SLQAMLIVMVVGICVALVG  295 (312)
Q Consensus       262 qs~g~ai~f~~~~~l----~~~~~~~il~~~~~~~~~~  295 (312)
                      ..+|..++-.+.+.+    +.+..+++..++++++.+.
T Consensus       338 ~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~  375 (394)
T PRK03699        338 GTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVM  375 (394)
T ss_pred             hhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHH
Confidence            778887776665543    2333344444444444443

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=99.11  E-value=8.1e-09  Score=100.11  Aligned_cols=262  Identities=9%  Similarity=-0.068  Sum_probs=131.4

Q ss_pred             cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-Hhcc-CCccccccc-hh--
Q 021469           24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLR-KEEDKGEKE-TA--   98 (312)
Q Consensus        24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~-~~~~~~~~~-~~--   98 (312)
                      ++++||+..|++....+++.++|+++...+......   +..+..|.+..++.++-.++. .+++ +|++....+ ++  
T Consensus       152 ~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~---~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~  228 (467)
T PRK09556        152 PRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFD---GHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIF  228 (467)
T ss_pred             CccceeeeEEeeecccchhhhHHHHHHHHHHHhhcc---CcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcc
Confidence            346899999999999999999999887554432110   012334444444444333333 3333 333211000 00  


Q ss_pred             -----hcc---hhhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhH-h--hhhhhccccccccccccc--chhhHHHHH
Q 021469           99 -----DAS---VNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQ-Q--AFVWAEFTKEIVTPALGV--SGVGGAMAV  165 (312)
Q Consensus        99 -----~~~---~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~-~--~f~~~~~~~~~~s~~lg~--~~~g~v~~~  165 (312)
                           +.+   ++++.+.++.+++  +.++||++..+....+..... .  ..|...|    ..+..|.  ...+..+..
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~y----l~~~~g~s~~~a~~~~~~  302 (467)
T PRK09556        229 GEPISEEDKETESTDMTKWQIFVE--YVLKNPVIWLLCFANIFLYIVRIGIDNWSPVY----AFQELGFSKEDAINTFTL  302 (467)
T ss_pred             cCccchhhhccccccCcHHHHHHH--HHHcChHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHccCCCHHHHHHHHHH
Confidence                 000   0001111222211  267888876554433222211 1  1111112    1222233  456777778


Q ss_pred             HhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHH
Q 021469          166 YGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGI  245 (312)
Q Consensus       166 ~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~  245 (312)
                      ..++.+++..+.|++.||+++|+..+. ..........+......++     +...++..++.|++.....+..+....+
T Consensus       303 ~~~~~~ig~~~~G~lsDr~g~r~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~G~~~~~~~~~~~~~~~~  376 (467)
T PRK09556        303 FEIGALVGSLLWGWLSDLANGRRALVA-CIALALIIFTLGVYQHATS-----EYMYLASLFALGFLVFGPQLLIGVAAVG  376 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCchHHH-HHHHHHHHHHHHHHHhcCc-----HHHHHHHHHHHHHHHhhHHHHHHHHHHh
Confidence            888999999999999999987653332 2212111211111111111     2234456666776544444444455557


Q ss_pred             hccCCh-hhhHHHHHHHHHH-HHHHHHHhhhhh----------------hHHHHHHHHHHHHHHHHHHHHHhh
Q 021469          246 LFKHDT-EGAFAQLKVWQCA-SIAVVFFIGPYI----------------SLQAMLIVMVVGICVALVGILFLT  300 (312)
Q Consensus       246 ~~~~~~-~~afa~~~~~qs~-g~ai~f~~~~~l----------------~~~~~~~il~~~~~~~~~~~~~~~  300 (312)
                      .+|++. ..+.++.+...++ |.+++-.+-+.+                ....-+.++.+..+++.+.+..+.
T Consensus       377 ~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  449 (467)
T PRK09556        377 FVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIVA  449 (467)
T ss_pred             hcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHHH
Confidence            777544 6789999988886 544433322221                123334444456666666666553

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=99.11  E-value=4.1e-08  Score=93.21  Aligned_cols=224  Identities=11%  Similarity=0.016  Sum_probs=132.0

Q ss_pred             cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchh
Q 021469           24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVN  103 (312)
Q Consensus        24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~  103 (312)
                      +++++++..++.+...+.+.++|..+...+....+      .+..|.+..++.++..+... ...|+++++++      +
T Consensus       138 ~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~g------w~~~f~~~~~l~~~~~l~~~-~~~p~~~~~~~------~  204 (394)
T PRK10213        138 PPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIG------WRNVFNAAAVMGVLCIFWII-KSLPSLPGEPS------H  204 (394)
T ss_pred             CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC------HHHHHHHHHHHHHHHHHHHH-HHCCCCCcccc------c
Confidence            35689999999999999999999999877654321      24455555444443332221 11232221111      0


Q ss_pred             hhhHHHHHHHHHHHhhcChhhHHHHHH-HHhhhhHhhhhhhcccccccc-cccccchhhHHHHHHhHHHHHHHHHHhhhh
Q 021469          104 FYSYLVSLSKSITTLLADVRMLLIIPL-FAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLT  181 (312)
Q Consensus       104 ~~~s~~~~~~~~~~~~~~~~~lll~p~-~~~~G~~~~f~~~~~~~~~~s-~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~  181 (312)
                      +.       ++..+.+++|+++.+... +...+...++. ...+..+.. .-++.+..|+++..++++.++++++.|++.
T Consensus       205 ~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~  276 (394)
T PRK10213        205 QK-------QNTFRLLQRPGVMAGMIAIFMSFAGQFAFF-TYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFIL  276 (394)
T ss_pred             ch-------hHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11       123456788887654332 22222111111 111111211 112335678889999999999999999999


Q ss_pred             cCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHH
Q 021469          182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVW  261 (312)
Q Consensus       182 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~  261 (312)
                      ||.+ |+.++....+.....+.+.  .+.++     ++...+..+++|++.+..+....+.+.+..||+..++.+.....
T Consensus       277 ~r~~-~~~l~~~~~~~~~~~~~l~--~~~~~-----~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (394)
T PRK10213        277 KRSV-KLALAGAPLVLAVSALVLT--LWGSD-----KIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAV  348 (394)
T ss_pred             hccc-hhHHHHHHHHHHHHHHHHH--HHhhh-----HHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcccHHHHHHHHHHH
Confidence            9854 3323222222222222221  12222     23455678889999999888888888888887666677777778


Q ss_pred             HHHHHHHHHHhhhhh
Q 021469          262 QCASIAVVFFIGPYI  276 (312)
Q Consensus       262 qs~g~ai~f~~~~~l  276 (312)
                      .++|..++-.+.+.+
T Consensus       349 ~~lg~~~G~~l~G~l  363 (394)
T PRK10213        349 IQLANTCGAAIGGYA  363 (394)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            888888888887765

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.11  E-value=2.7e-08  Score=93.84  Aligned_cols=225  Identities=11%  Similarity=-0.011  Sum_probs=134.7

Q ss_pred             ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccC-Cccccccchhhcchhh
Q 021469           26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK-EEDKGEKETADASVNF  104 (312)
Q Consensus        26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~-~~~~~~~~~~~~~~~~  104 (312)
                      +++++..|+.-.....+.++|..+...+....+      .+..|.+...+..+.. +...+++ ++++++++ +    ++
T Consensus       124 ~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g------~~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~----~~  191 (382)
T TIGR00902       124 KQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFD------EQNILAILTAGLAFML-IGFLIKPTIPPKDAIP-E----DE  191 (382)
T ss_pred             HHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcC------hhHHHHHHHHHHHHHH-HHHHcCCCCCCCcccc-c----cc
Confidence            467888999888889999999988776654322      1234444433322222 2223332 22211111 0    00


Q ss_pred             hhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhhc
Q 021469          105 YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTT  182 (312)
Q Consensus       105 ~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~d  182 (312)
                      .    ++.++..+++|||+.+.+....+......+.+.+..+ .+..+ .|  ...+|+++....++|+++..+.+++.|
T Consensus       192 ~----~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~-~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~  265 (382)
T TIGR00902       192 S----QGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSA-IYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQ  265 (382)
T ss_pred             c----ccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHh
Confidence            0    1122345678999886655443332222222223222 12222 23  346888888999999999999999999


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHH-H
Q 021469          183 GLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLK-V  260 (312)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~-~  260 (312)
                      |++.|+ ++.++.+.....+...  .+.++     ++..++.-+++|++-+.........+.+. |++. ..+.+++. .
T Consensus       266 r~g~~~-~l~~~~~~~~~~~~~~--~~~~~-----~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~  336 (382)
T TIGR00902       266 NCSARD-LLLISAIACVGRWAII--GAIEA-----FPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNAL  336 (382)
T ss_pred             hCCHHH-HHHHHHHHHHHHHHHH--HhHhh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHH
Confidence            998665 5556666666555432  22222     24467778999999999888888788776 5433 34566765 3


Q ss_pred             HHHHHHHHHHHhhhhhh
Q 021469          261 WQCASIAVVFFIGPYIS  277 (312)
Q Consensus       261 ~qs~g~ai~f~~~~~l~  277 (312)
                      ...+|.+++-.+++.+.
T Consensus       337 ~~g~g~~~g~~~~G~l~  353 (382)
T TIGR00902       337 AMGGLIAIFTAFAGFIY  353 (382)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            56678888888877653

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.10  E-value=9.8e-08  Score=90.60  Aligned_cols=229  Identities=15%  Similarity=0.108  Sum_probs=120.0

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF  104 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~  104 (312)
                      +++|+++.++....+..+.++|+.+...+....     ...+..|.+..++..+..+..+++|+|++++++++     +.
T Consensus       125 ~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~-----~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~~~~~-----~~  194 (402)
T PRK11902        125 PEERGAGAAVKVLGYRLAMLVSGGLALWLADRV-----LGWGNTYLLMAGLMLAGALTTLWAPEPEVPARPPR-----SL  194 (402)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcc-----cCHHHHHHHHHHHHHHHHHHHHhcCCCcccccccc-----hh
Confidence            467999999999999999999988776664321     01355666666655555554556665544322110     01


Q ss_pred             hhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhH-HHHHHHHHHhhhh
Q 021469          105 YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGA-FDAICSLAAGRLT  181 (312)
Q Consensus       105 ~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~-~~~ig~~~~G~l~  181 (312)
                      +++.++.   ..+++++|+.+.++...+.......+..+..+. +..+..|  .+.+|+++...+. +++++..+.|++.
T Consensus       195 ~~~~~~~---~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~-~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~  270 (402)
T PRK11902        195 GEAVVGP---LRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTT-FLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLM  270 (402)
T ss_pred             HHHHHHH---HHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHH-HHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            1112222   334678887654433322222111111111111 1112223  3457777766654 5899999999999


Q ss_pred             cCCCChhhHHHHHHHHHHHHHH-HHHhcccCCCCCCCchHHHHHH----HHHHhhhhHHhhhhHhHHHHhccCChhhhHH
Q 021469          182 TGLPSITFIVSGGAIAQVVVFL-WILINYSVTSGVLGTLYPLIMA----ALLGIGDGVLNTQLSALLGILFKHDTEGAFA  256 (312)
Q Consensus       182 d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa  256 (312)
                      ||+++|+.+ .++.+....... +......+++    .+...+..    +..|++.+..++....++.+.+|++   .++
T Consensus       271 ~r~g~~~~l-~~~~~~~~l~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~  342 (402)
T PRK11902        271 VRLGLYRSL-MLFGVLQAVSNLGYWVLAVTPKH----LWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSAT---QYA  342 (402)
T ss_pred             HHHhHHHHH-HHHHHHHHHHHHHHHHHHhcCCc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHH---HHH
Confidence            999866533 333333322221 1111222221    12222222    4556667776777777777666533   345


Q ss_pred             HHHHHHHHHHHHHHHhhhh
Q 021469          257 QLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       257 ~~~~~qs~g~ai~f~~~~~  275 (312)
                      .+....++|..++-.+++.
T Consensus       343 ~~~~~~~l~~~~~~~~~G~  361 (402)
T PRK11902        343 LLSALASVGRVYVGPTSGY  361 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            5555666666544444443

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.10  E-value=9.7e-09  Score=97.99  Aligned_cols=232  Identities=11%  Similarity=0.020  Sum_probs=128.8

Q ss_pred             eeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhhhh
Q 021469           27 VIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYS  106 (312)
Q Consensus        27 ~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~~~  106 (312)
                      ++|+..|..-...+.+..+|..+...+... +      .+..|.+..++.++..++.+++++++++++++.++.+.++  
T Consensus       138 ~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~------~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  208 (420)
T PRK09528        138 RSGFEYGRARMWGSLGWALCAFIAGILFNI-N------PQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGANA--  208 (420)
T ss_pred             hccccchhhHHhhhHHHHHHHHHHHHHHhc-C------chHhHHHHHHHHHHHHHHHhcccccccchhhhccchhccc--
Confidence            457777877777888999998887655321 1      1235555555555555555555443332221111000001  


Q ss_pred             HHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhh---hccccc-ccccccccchhhHHHHHHhHHHHHHHHHHhhhhc
Q 021469          107 YLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVW---AEFTKE-IVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTT  182 (312)
Q Consensus       107 s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~---~~~~~~-~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d  182 (312)
                       .++..++..+.++||+++.++.......+......   ..|-.. +.....+....|++..+.++.++++.++.|++.|
T Consensus       209 -~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~d  287 (420)
T PRK09528        209 -SAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIIN  287 (420)
T ss_pred             -ccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             11234455567888887544432221111111111   111111 1111223356788888899999999999999999


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChh-hhHHH-HHH
Q 021469          183 GLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQ-LKV  260 (312)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~-~afa~-~~~  260 (312)
                      |+++|+. +..+.++....+.+.  .+.++     ++......++.|++.+.........+.+.+|++.. .+.+. ++.
T Consensus       288 r~g~~~~-~~~~~~l~~~~~~l~--~~~~~-----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  359 (420)
T PRK09528        288 RIGAKNA-LLLAGTIMAVRIIGS--GFATG-----PLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQF  359 (420)
T ss_pred             HhCcchh-hHHHHHHHHHHHHHH--Hhccc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHH
Confidence            9987763 334444433333322  22222     23455667888888888777777777887876542 33333 666


Q ss_pred             HHHHHHHHHHHhhhhh
Q 021469          261 WQCASIAVVFFIGPYI  276 (312)
Q Consensus       261 ~qs~g~ai~f~~~~~l  276 (312)
                      ...+|..++..+.+.+
T Consensus       360 ~~~lg~~ig~~~~G~l  375 (420)
T PRK09528        360 AKQLGAVFLSTLAGNL  375 (420)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            6777888877776654

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=99.10  E-value=1.5e-09  Score=99.86  Aligned_cols=230  Identities=19%  Similarity=0.190  Sum_probs=129.6

Q ss_pred             cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcch
Q 021469           24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASV  102 (312)
Q Consensus        24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~  102 (312)
                      ++++|++..|+.....+.+.++|..+...+....+      .+..|.+..++.++..++. +++++++++++++.++++.
T Consensus       115 ~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~------~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~  188 (352)
T PF07690_consen  115 PPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG------WRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESE  188 (352)
T ss_dssp             CTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH------HCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT
T ss_pred             hhhhhhhccccccchhhhhhhcccchhhhhhhccc------cccccccccchhhhhhhhHhhhhhhcccccccccccccc
Confidence            34689999999999999999999999877753211      2345666666676666543 3444333332222111110


Q ss_pred             hhhhHHHHHHHHHHHhh-cChhhH-HHHHHHHhhhhHhh--hhhhcc-cccccccccccchhhHHHHHHhHHHHHHHHHH
Q 021469          103 NFYSYLVSLSKSITTLL-ADVRML-LIIPLFAYSGLQQA--FVWAEF-TKEIVTPALGVSGVGGAMAVYGAFDAICSLAA  177 (312)
Q Consensus       103 ~~~~s~~~~~~~~~~~~-~~~~~l-ll~p~~~~~G~~~~--f~~~~~-~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~  177 (312)
                         ...+++.++.+|.+ ++|.++ +++..+........  .+...| .+.+.-+  |....+..+.+.++..++++.+.
T Consensus       189 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  263 (352)
T PF07690_consen  189 ---SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFS--GPSQAGLLFSIFGIVGIIGSLLA  263 (352)
T ss_dssp             -----HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC--THHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---cccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCC--HHHHHHHHHHHHHHHHHHHHHHH
Confidence               00111222234433 344333 22222222111111  111122 1111111  23466777888899999999999


Q ss_pred             hhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhHH
Q 021469          178 GRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFA  256 (312)
Q Consensus       178 G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~afa  256 (312)
                      |++.||+++|+....... .......... ..+...   ++.+..+..+++|++.+..+.....++.+..|++ ...+.+
T Consensus       264 ~~l~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g  338 (352)
T PF07690_consen  264 GRLSDRFGRRRRLLIAIL-LLILGALGLL-LLPFSS---SPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFG  338 (352)
T ss_dssp             HHHHHHTTCHHHHHHHHH-HHHHHHHHHC-CSHHHC---HHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHH
T ss_pred             HHHHHHcCcHHHHHHHHH-HHHHHHHHHH-HHHHhh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            999999886543332222 2222222111 111110   1235666888899999999999999999998754 468999


Q ss_pred             HHHHHHHHHHHHH
Q 021469          257 QLKVWQCASIAVV  269 (312)
Q Consensus       257 ~~~~~qs~g~ai~  269 (312)
                      +....+++|..++
T Consensus       339 ~~~~~~~~~~~ig  351 (352)
T PF07690_consen  339 LFNSIGSLGGIIG  351 (352)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHC
Confidence            9999999988764

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.09  E-value=2.4e-08  Score=94.09  Aligned_cols=227  Identities=11%  Similarity=-0.011  Sum_probs=126.6

Q ss_pred             ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhhh
Q 021469           26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFY  105 (312)
Q Consensus        26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~~  105 (312)
                      +++++..|.......++..+|..+...+....+      .+..|.+..+...+..+...+.|+++++++++ +   ..+ 
T Consensus       124 ~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g------~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~-  192 (382)
T PRK11128        124 KQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFG------EQAILWILTAGVASMLLGQLLRPTIMPQGESR-Q---QES-  192 (382)
T ss_pred             hhccCCcchHHHHHHHHHHHHHHHHHHHHHHcC------hhHHHHHHHHHHHHHHHHHHccCCCCCccccc-c---ccc-
Confidence            346677777777778999999998877754321      23344444433333333333333322211111 0   000 


Q ss_pred             hHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhccccccccc-ccccchhhHHHHHHhHHHHHHHHHHhhhhcCC
Q 021469          106 SYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP-ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL  184 (312)
Q Consensus       106 ~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~-~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~  184 (312)
                       +.   .++..+.++||+.+.+....+..+..........+ .+..+ ....+.+|+.+.+..+++++...+.|++.||+
T Consensus       193 -~~---~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~  267 (382)
T PRK11128        193 -AG---WPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSA-IYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW  267 (382)
T ss_pred             -cc---cchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHH-HHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence             00   12234567888876655433332222211111111 11111 11234678888888899999999999999999


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHH-HHHH
Q 021469          185 PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLK-VWQC  263 (312)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~-~~qs  263 (312)
                      ++|+ .+..+.+.....+...  .+.++     ++...+..+++|++.+..+......+.+.-+++..++.+.+. ..++
T Consensus       268 ~~~~-~l~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (382)
T PRK11128        268 SARD-LLLLSAICGVVRWGLM--GSTTA-----LPWLIVIQILHCGTFTVCHLAAMRYIAARPGSEVIRLQALYSALAMG  339 (382)
T ss_pred             CHHH-HHHHHHHHHHHHHHHH--Hhhhh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHHHHHHH
Confidence            8665 4445555544444322  22222     344667888999998888777777776654444445667665 4455


Q ss_pred             HHHHHHHHhhhhh
Q 021469          264 ASIAVVFFIGPYI  276 (312)
Q Consensus       264 ~g~ai~f~~~~~l  276 (312)
                      +|.+++-.+.+.+
T Consensus       340 ~g~~ig~~i~G~l  352 (382)
T PRK11128        340 GSIAIMTVLSGFL  352 (382)
T ss_pred             HHHHHHHHHHHHH
Confidence            6667777766654

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.09  E-value=7.3e-08  Score=91.45  Aligned_cols=229  Identities=14%  Similarity=0.089  Sum_probs=129.0

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF  104 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~  104 (312)
                      |+++++..|+.....+.+.++|..+.-.+....       ....+.+...+..++.+....+|+++.++++.+.     +
T Consensus       119 ~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-------~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~  186 (393)
T PRK11195        119 GEKLVKANGWMEGSTIAAILLGTVLGGALADPH-------AEAALAVCALIYLLAALFNLFIPRLGARRPGQSW-----N  186 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhcCCCCcccccccCC-----C
Confidence            468999999999999999999988876654321       1223333333333344434556543322111100     0


Q ss_pred             hhHHHHHHHHHH-HhhcChhhHHHHHHH-HhhhhHhhhhhh--cccccccccccccchhhHHHHHHhHHHHHHHHHHhhh
Q 021469          105 YSYLVSLSKSIT-TLLADVRMLLIIPLF-AYSGLQQAFVWA--EFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRL  180 (312)
Q Consensus       105 ~~s~~~~~~~~~-~~~~~~~~lll~p~~-~~~G~~~~f~~~--~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l  180 (312)
                      +....+++++-. .++++|+.....-.. +..+........  .+.+...  -.+..+.|+++..++++.++++++.+++
T Consensus       187 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--g~s~~~~G~~~~~~~~g~i~g~~~~~~l  264 (393)
T PRK11195        187 PIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVAL--GITLNQPAYLQAVVAIGIAVGAGAAARL  264 (393)
T ss_pred             HHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            111122222222 346677654332221 111211111111  1111110  0123468999999999999999999999


Q ss_pred             hcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh--hhhHHHH
Q 021469          181 TTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT--EGAFAQL  258 (312)
Q Consensus       181 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~--~~afa~~  258 (312)
                      .||.++|+ ++..+..... ... .+ ..+++     ++...+..+++|++.+..+....+.+.+.-|++.  .+++++.
T Consensus       265 ~~~~~~~~-~~~~g~~~~~-~~~-~~-~~~~~-----~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~  335 (393)
T PRK11195        265 VTLETVLR-VLPAGILMGL-VVL-LM-ALQHS-----LLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQ  335 (393)
T ss_pred             hcCCcccc-hHHHHHHHHH-HHH-HH-HHHhH-----HHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHH
Confidence            99876554 4444433222 111 11 12221     2335566778899988888877777766555433  5689999


Q ss_pred             HHHHHHHHHHHHHhhhhh
Q 021469          259 KVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       259 ~~~qs~g~ai~f~~~~~l  276 (312)
                      +..+.+|..++..+...+
T Consensus       336 ~~~~~~~~~~~~~~~~~~  353 (393)
T PRK11195        336 NFNENLAMLLMLGLYSLL  353 (393)
T ss_pred             hHHHHHHHHHHHHHHHHH
Confidence            999999999888876643

>TIGR00901 2A0125 AmpG-related permease

Probab=99.09  E-value=1.3e-08  Score=94.66  Aligned_cols=230  Identities=12%  Similarity=0.084  Sum_probs=125.6

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCC--CcCCCCchhhHHHHHHHHHHHHHHHHhc-cCCccccccchhhcc
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK--GGSTSGTTLLFIVFLGVITLGTILMCFL-RKEEDKGEKETADAS  101 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~--~~~~~~~~~~~~if~~i~~~g~~l~lfL-~~~~~~~~~~~~~~~  101 (312)
                      +++|++..|+.......+.++|+.+...+.....  +......+..|.+..++.+++.+..+++ ++|++.+ ++++   
T Consensus       114 ~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~-~~~~---  189 (356)
T TIGR00901       114 DEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQEDA-SVPK---  189 (356)
T ss_pred             HhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCccc-ccch---
Confidence            4789999999999999999999988866543321  1111124667777777666665554543 4432211 1110   


Q ss_pred             hhhhhHHHHHHHHHHHhhcChh---hHHHHHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHh-HHHHHHHHHH
Q 021469          102 VNFYSYLVSLSKSITTLLADVR---MLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYG-AFDAICSLAA  177 (312)
Q Consensus       102 ~~~~~s~~~~~~~~~~~~~~~~---~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g-~~~~ig~~~~  177 (312)
                       +++.+.++.+++   ++++|+   .+.+....+..........+..+.-+...-.+.++.|.+...++ +..+++.++.
T Consensus       190 -~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~  265 (356)
T TIGR00901       190 -PLTQAVLKPIRE---FFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIG  265 (356)
T ss_pred             -hHHHHHHHHHHH---HHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHH
Confidence             111223333333   344443   43332222211221111112122111111112345677777666 4678999999


Q ss_pred             hhhhcCCCChhhHHHHHHHHHHHHHHHH-HhcccCC-C--CCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-h
Q 021469          178 GRLTTGLPSITFIVSGGAIAQVVVFLWI-LINYSVT-S--GVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-E  252 (312)
Q Consensus       178 G~l~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~--~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~  252 (312)
                      |++.||+++|+.+ ..+.++....+... +.....+ .  +..+.+....+.++.+++.+..+.....++.+.+|++. .
T Consensus       266 g~l~~r~g~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g  344 (356)
T TIGR00901       266 GIIMQPLNILYAL-LLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGA  344 (356)
T ss_pred             HHHHhhhhHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccH
Confidence            9999999876544 34444433333321 1110000 0  00112345667788899999999999999999998665 5


Q ss_pred             hhHHHHHHHHH
Q 021469          253 GAFAQLKVWQC  263 (312)
Q Consensus       253 ~afa~~~~~qs  263 (312)
                      +.++++...++
T Consensus       345 ~~~g~~~~~~~  355 (356)
T TIGR00901       345 TQMALLSSLSA  355 (356)
T ss_pred             HHHHHHHHHHh
Confidence            77888776554

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=99.07  E-value=1.1e-07  Score=89.89  Aligned_cols=143  Identities=15%  Similarity=0.188  Sum_probs=89.0

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      +..+.....++++.+++.++.|++.||+++|+ .+..+..+....+....  ..++     ++...+..+++|++.+...
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~-~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~l~G~~~~~~~  320 (399)
T PRK05122        249 DGAALALTLFGVAFVGARLLFGNLINRLGGLR-VAIVSLLVEILGLLLLW--LAPS-----PWMALIGAALTGFGFSLVF  320 (399)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHH--Hhcc-----HHHHHHHHHHHHHhHHHHH
Confidence            34456667788899999999999999988665 44444444333333221  2222     2345566788999888777


Q ss_pred             hhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh----hHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 021469          237 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI----SLQAMLIVMVVGICVALVGILFLTIQVEKAF  307 (312)
Q Consensus       237 t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l----~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~  307 (312)
                      ........+..|++ +.++.+++.....+|.+++-.+.+.+    ..+..+.+..++.+++++.......+.+|++
T Consensus       321 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (399)
T PRK05122        321 PALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAPRAV  396 (399)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcccccccC
Confidence            66666666777644 46889999999998887765554443    2333344444555555555554444444433

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.07  E-value=3.6e-08  Score=95.33  Aligned_cols=245  Identities=13%  Similarity=0.055  Sum_probs=120.8

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCC--cCCCCchhhHHHHHHHHHHHHHHHHhccCCccc----cccchh
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKG--GSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK----GEKETA   98 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~--~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~----~~~~~~   98 (312)
                      +++||+..|+.......+.+++.++...+......  ......+..|.+..+..++..+..+++|+..+.    ++.|+.
T Consensus       151 ~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~  230 (479)
T PRK10077        151 AHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQA  230 (479)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHH
Confidence            36799999998888888888777666555432110  011234556666666666665556677654321    111110


Q ss_pred             h-----c-chhhhhHHHHHHHHHHH--hhcChhhHHHHHHHHhhhhHhhhhh---h-----ccccccccccccc--chhh
Q 021469           99 D-----A-SVNFYSYLVSLSKSITT--LLADVRMLLIIPLFAYSGLQQAFVW---A-----EFTKEIVTPALGV--SGVG  160 (312)
Q Consensus        99 ~-----~-~~~~~~s~~~~~~~~~~--~~~~~~~lll~p~~~~~G~~~~f~~---~-----~~~~~~~s~~lg~--~~~g  160 (312)
                      +     . ..++.....++.++..+  ..++++.+.+....+..++..+...   +     .+...+. ...|.  ...+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~-~~~g~~~~~~~  309 (479)
T PRK10077        231 EGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIF-KTLGASTDIAL  309 (479)
T ss_pred             HHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHH-HHcCCCCchHH
Confidence            0     0 00011111222222221  1111221111111111111111100   0     0111111 11222  2334


Q ss_pred             HHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhh-HHhhhh
Q 021469          161 GAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDG-VLNTQL  239 (312)
Q Consensus       161 ~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~-~~~t~~  239 (312)
                      ......++.+++++++.|++.||++||+ +++.+.++...+.........++..   ..+.....++++++-+ .+.+..
T Consensus       310 ~~~~~~~~~~~i~~~~~g~l~dr~g~r~-~~i~~~~~~~v~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  385 (479)
T PRK10077        310 LQTIIVGVINLTFTVLAIMTVDKFGRKP-LQIIGALGMAIGMFSLGTAFYTQAP---GIVALLSMLFYVAAFAMSWGPVC  385 (479)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcChH-HHHHhHHHHHHHHHHHHHHHhcCcc---cHHHHHHHHHHHHHHhccccchh
Confidence            5666788899999999999999998775 5455555544443322211111110   1123333334444333 244567


Q ss_pred             HhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhh
Q 021469          240 SALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       240 ~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~  274 (312)
                      +.++.+.+|. ++..++++....+.+|..++-.+.+
T Consensus       386 ~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p  421 (479)
T PRK10077        386 WVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFP  421 (479)
T ss_pred             HHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence            7888888974 4567899999999988887754444

>TIGR00889 2A0110 nucleoside transporter

Probab=99.07  E-value=4.8e-08  Score=93.53  Aligned_cols=227  Identities=9%  Similarity=-0.013  Sum_probs=130.0

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF  104 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~  104 (312)
                      +..+.|..|.      .|.++|+++.-.+ ....     . +..+.+..++.++..++.+++|++++.+++  ++     
T Consensus       131 ~~~~~r~~G~------lG~~ig~~l~g~l-~~~~-----~-~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~--~~-----  190 (418)
T TIGR00889       131 DFPPIRVMGT------IGFIAAMWAVSLL-DIEL-----S-NIQLYITAGSSALLGVFALTLPDIPVAKST--AK-----  190 (418)
T ss_pred             cCCCeeeehh------HHHHHHHHHHHHh-cccc-----h-hHHHHHHHHHHHHHHHHHhcCCCCCCCccc--cc-----
Confidence            3456777773      5777777766544 1111     0 122334444444444444556554221111  10     


Q ss_pred             hhHHHHHH-HHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccc---ccc-cc----ccccchhhHHHHHHhHHHHHHHH
Q 021469          105 YSYLVSLS-KSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTK---EIV-TP----ALGVSGVGGAMAVYGAFDAICSL  175 (312)
Q Consensus       105 ~~s~~~~~-~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~---~~~-s~----~lg~~~~g~v~~~~g~~~~ig~~  175 (312)
                       .+.+++. .+..+++|||+...+....+..+....+....++.   ... +.    ..+.+.+++.+.+..+.++++.+
T Consensus       191 -~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~  269 (418)
T TIGR00889       191 -MSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFIL  269 (418)
T ss_pred             -cCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence             0111111 11235688999765555555544333222221111   110 11    01235678999999999999999


Q ss_pred             HHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhh
Q 021469          176 AAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGA  254 (312)
Q Consensus       176 ~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~a  254 (312)
                      ..|++.||+++|+ ++.++.++....+.+.. ...++.  ...+..++..++.|++.+..+.....++.+.+|++ +.++
T Consensus       270 ~~g~l~dr~g~r~-~l~~~~~~~~v~~~l~~-~~~~~~--~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~  345 (418)
T TIGR00889       270 TIPFFLKRFGIKK-VMLLSLVAWALRFGFFA-YGDPEY--FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASA  345 (418)
T ss_pred             HHHHHHHHhCcHH-HHHHHHHHHHHHHHHHH-HcCcch--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence            9999999998775 55566655554443322 111111  01123456788899998888888888888988854 4678


Q ss_pred             HHHHH-HHHHHHHHHHHHhhhhh
Q 021469          255 FAQLK-VWQCASIAVVFFIGPYI  276 (312)
Q Consensus       255 fa~~~-~~qs~g~ai~f~~~~~l  276 (312)
                      +++.. ..+++|.+++-.+.+.+
T Consensus       346 ~g~~~~~~~~lg~~iGp~l~G~l  368 (418)
T TIGR00889       346 QGLFTLMCNGFGSLLGYILSGVM  368 (418)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHH
Confidence            99997 57889999988887764

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>PRK11043 putative transporter; Provisional

Probab=99.06  E-value=9.9e-08  Score=90.29  Aligned_cols=226  Identities=12%  Similarity=0.026  Sum_probs=123.5

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF  104 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~  104 (312)
                      ++++++..+..+.....+..+|.++...+....+      .+..|.+..++.++..+...++++++++++++      ++
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  192 (401)
T PRK11043        125 AQKANRVFATIMPLVALSPALAPLLGAWLLNHFG------WQAIFATLFAITLLLILPTLRLKPSKKARKQS------QD  192 (401)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------hHHHHHHHHHHHHHHHHHHHHcCCCCCccccc------hH
Confidence            3457788888888888888888888766543211      24556666666666655555554332211110      11


Q ss_pred             hhHHHHHHHHHHHhhcChhhHHHHHHH-HhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcC
Q 021469          105 YSYLVSLSKSITTLLADVRMLLIIPLF-AYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTG  183 (312)
Q Consensus       105 ~~s~~~~~~~~~~~~~~~~~lll~p~~-~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~  183 (312)
                      +       ++..+.+++|+.+.....+ ...+...++. ...+..+.....+....|+.++.++++.++|+++.+++.||
T Consensus       193 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r  264 (401)
T PRK11043        193 A-------LTFKQLLKSKTYLGNVLIFAACSAAFFAWL-TGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQK  264 (401)
T ss_pred             H-------HHHHHHHcChhHHHHHHHHHHHHHHHHHHH-HHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1       1233456677754322221 1122212221 11111111111123456777888888999999999999999


Q ss_pred             CCChhhHHHHHHHHHHHH-HH-HHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHH
Q 021469          184 LPSITFIVSGGAIAQVVV-FL-WILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVW  261 (312)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~  261 (312)
                      +++|+.. ....+....+ .. +......++ +   ++...+...++|++.+...........+..|+++.++.++.+..
T Consensus       265 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~  339 (401)
T PRK11043        265 WGGEQLL-PWLLVLFAVSVIAIWLASLLSHP-S---LVPLLIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAALQNTL  339 (401)
T ss_pred             cCHHHHH-HHHHHHHHHHHHHHHHHHHhccC-c---HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcccChHHHHHHHHH
Confidence            8765422 2222222111 11 111111111 1   12344456677888777777766666666777777899999998


Q ss_pred             HHHHHHHHHHhhhh
Q 021469          262 QCASIAVVFFIGPY  275 (312)
Q Consensus       262 qs~g~ai~f~~~~~  275 (312)
                      +..+...+-.+.+.
T Consensus       340 ~~~~~~~~~~~~g~  353 (401)
T PRK11043        340 QLGLCFLASLLVSA  353 (401)
T ss_pred             HHHHHHHHHHHHHH
Confidence            87666666655554

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.06  E-value=4.6e-08  Score=91.14  Aligned_cols=218  Identities=15%  Similarity=0.100  Sum_probs=121.9

Q ss_pred             chhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHH-hccCCccccccchhhcchhhhhHH
Q 021469           30 SFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC-FLRKEEDKGEKETADASVNFYSYL  108 (312)
Q Consensus        30 ~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~l-fL~~~~~~~~~~~~~~~~~~~~s~  108 (312)
                      .+.++.....+.+.++|..+...+....      ..+..|.+..++.++..++.. ++|+++++++++.      +.   
T Consensus       125 ~~~~~~~~~~~~g~~ig~~~~~~l~~~~------~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---  189 (375)
T TIGR00899       125 MFSSVMRAQISLAWVIGPPLAFWLALGF------GFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGAL------TR---  189 (375)
T ss_pred             HHHHHHHHHHhHHHHHhhhHHHHHHHhc------ccHHHHHHHHHHHHHHHHHHHHhCCCcccCccccc------Cc---
Confidence            3467777777888888888776654321      134566666666665555543 4665332221110      01   


Q ss_pred             HHHHHHHHHhhcChhhHHHHHHH-HhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhhcCCC
Q 021469          109 VSLSKSITTLLADVRMLLIIPLF-AYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTTGLP  185 (312)
Q Consensus       109 ~~~~~~~~~~~~~~~~lll~p~~-~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~  185 (312)
                       ++.+   +.+++|+.+.+.... +..+....+. ...+. +..+..|  ..+.|..+....+...++..+.|++.||++
T Consensus       190 -~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g  263 (375)
T TIGR00899       190 -LEVR---GLLASRDTRLLFVACTLMWGCNILYI-INMPL-LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFG  263 (375)
T ss_pred             -chhh---hhhcCcchHHHHHHHHHHHHHHHHHH-hhhHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence             1111   245566654433222 1111111111 11111 1111122  345677776677778888899999999998


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHHHHHH
Q 021469          186 SITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCAS  265 (312)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g  265 (312)
                      +|+ .+.++.+.....+...  ...++     .+...+..++.|++-+..+...+....+..|++...+.+++.....+|
T Consensus       264 ~~~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  335 (375)
T TIGR00899       264 KRR-LMLLAALAGVAFYTGL--AADNS-----LWALLMLQLLNAIFIGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVG  335 (375)
T ss_pred             chh-HHHHHHHHHHHHHHHH--HHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHH
Confidence            765 3334433332222221  11111     133455667777777777777777777888877778899999999999


Q ss_pred             HHHHHHhhhhh
Q 021469          266 IAVVFFIGPYI  276 (312)
Q Consensus       266 ~ai~f~~~~~l  276 (312)
                      ..++-.+.+.+
T Consensus       336 ~~~g~~~~g~~  346 (375)
T TIGR00899       336 WIIAGSVGGIL  346 (375)
T ss_pred             HHHHHHHHHHH
Confidence            99888777654

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=99.05  E-value=6.1e-08  Score=95.30  Aligned_cols=228  Identities=15%  Similarity=0.094  Sum_probs=140.2

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcchh
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVN  103 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~~  103 (312)
                      +++..+.+++--..++.+.++|..++-.+....+.      ...|.+-.+ +.+..+.+ ..+++ +.++++       .
T Consensus       134 ~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~------~~~f~inal-sfl~~i~~l~~~~~-~~~~~~-------~  198 (524)
T PF05977_consen  134 KEDLPAANALNSISFNIARIIGPALGGILVAFFGA------AAAFLINAL-SFLISILALLRWKP-PPPPSS-------L  198 (524)
T ss_pred             HhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHH------HHHHHHHHH-HHHHHHHHHHHccc-cccccc-------c
Confidence            35677778888888888888888777665432211      123333222 22222222 23332 221111       1


Q ss_pred             hhhHHHHHHHHHHHhhc-ChhhHHHHHHHHhhhhHhhhhhhccccccccccc--ccchhhHHHHHHhHHHHHHHHHHhhh
Q 021469          104 FYSYLVSLSKSITTLLA-DVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPAL--GVSGVGGAMAVYGAFDAICSLAAGRL  180 (312)
Q Consensus       104 ~~~s~~~~~~~~~~~~~-~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~l--g~~~~g~v~~~~g~~~~ig~~~~G~l  180 (312)
                      +++++.+++++-++..+ +|.++..+......++..+-.....| .+..+.+  |....|+++.++|++.++|+++.+++
T Consensus       199 ~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlP-l~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l  277 (524)
T PF05977_consen  199 PRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLP-LFARDVLGGGASGYGLLLAAFGVGAILGALLLPRL  277 (524)
T ss_pred             chhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhh-HHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            12346677777788644 66665554444444443333333332 1222222  34567999999999999999999999


Q ss_pred             hcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhHHHHH
Q 021469          181 TTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLK  259 (312)
Q Consensus       181 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~afa~~~  259 (312)
                      .+|+++++ ++..+.+....+.+..  ...++     .++..+..++.|++....++..++++....|++ ..+++++++
T Consensus       278 ~~~~~~~~-lv~~~~~~~a~~~~~l--al~~~-----~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~  349 (524)
T PF05977_consen  278 RRRLSSRR-LVLLASLLFALALLLL--ALSPS-----FWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQ  349 (524)
T ss_pred             hcccCcch-hhHHHHHHHHHHHHHH--hcchH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHH
Confidence            88876544 4445554443332221  22222     245677888899999999999998888888765 478999999


Q ss_pred             HHHHHHHHHHHHhhhhh
Q 021469          260 VWQCASIAVVFFIGPYI  276 (312)
Q Consensus       260 ~~qs~g~ai~f~~~~~l  276 (312)
                      .....+.+++..+.+.+
T Consensus       350 ~~~~g~~~lGsll~G~l  366 (524)
T PF05977_consen  350 MVFFGGMPLGSLLWGFL  366 (524)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999988887764

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.03  E-value=5.1e-08  Score=91.81  Aligned_cols=219  Identities=13%  Similarity=0.083  Sum_probs=117.6

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF  104 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~  104 (312)
                      +++|++..|++....+.+..+|..+...+.....      ....+..  .+.+.+.+..++.+.++++++++       +
T Consensus       125 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-------~  189 (381)
T PRK03633        125 SRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELM------SVLPWVT--GLVLAAILPLLFTRILNQQAENH-------D  189 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc------chHHHHH--HHHHHHHHHHHHhcccCCCCCCC-------C
Confidence            4578999999999999999999988765532210      0111111  11112222222322222111110       1


Q ss_pred             hhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCC
Q 021469          105 YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL  184 (312)
Q Consensus       105 ~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~  184 (312)
                      ..+       ..+.+++|+........+..++..+...+..|.-+.......+.+|.....++++++++....|++.||+
T Consensus       190 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~  262 (381)
T PRK03633        190 STS-------IWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRF  262 (381)
T ss_pred             CCC-------HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc
Confidence            111       2234566665554433333333222221211211111112234678888889999999999999999999


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHHHHHH
Q 021469          185 PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQC  263 (312)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~~qs  263 (312)
                      ++|+ .+..+..+.........   + .      .......+++|++.............+..|+++ ..+.+.+....+
T Consensus       263 ~~~~-~l~~~~~~~~~~~~~~~---~-~------~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (381)
T PRK03633        263 GRLL-VLRVQVFVVILGSIAML---S-Q------AAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYT  331 (381)
T ss_pred             CcHH-HHHHHHHHHHHHHHHHh---h-h------HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence            8765 43344444333332221   1 1      112345566777766666666666666665544 446677777788


Q ss_pred             HHHHHHHHhhhhh
Q 021469          264 ASIAVVFFIGPYI  276 (312)
Q Consensus       264 ~g~ai~f~~~~~l  276 (312)
                      +|.+++-.+.+.+
T Consensus       332 lG~~igp~~~G~l  344 (381)
T PRK03633        332 VGSLLGPSFTAML  344 (381)
T ss_pred             HHHHHHHHHHHHH
Confidence            8888887777754

>PRK11663 regulatory protein UhpC; Provisional

Probab=99.03  E-value=7.4e-08  Score=92.51  Aligned_cols=237  Identities=9%  Similarity=-0.069  Sum_probs=122.8

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHH-HHHhccCCcccc---c-----c
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI-LMCFLRKEEDKG---E-----K   95 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~-l~lfL~~~~~~~---~-----~   95 (312)
                      +++||+..|+.....+.+.++|..+...+....+      .+..|.+..++.++..+ ...+++++++..   +     +
T Consensus       142 ~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~g------w~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  215 (434)
T PRK11663        142 RTERGGWWAIWNTAHNVGGALIPLVVGAIALHYG------WRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRH  215 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc------HHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccc
Confidence            3679999999999999999999987766543211      34556555555444433 334555432211   0     0


Q ss_pred             chhhc-ch--hhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHH
Q 021469           96 ETADA-SV--NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFD  170 (312)
Q Consensus        96 ~~~~~-~~--~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~  170 (312)
                      +.++. ++  +++.+.++.++.  +.++||+...+...++...+.+.......+. +..+..|  ....+....+++++.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~l~~~~g~s~~~a~~~~~~~~~~~  292 (434)
T PRK11663        216 DALELAQQQEGAGLSRKEILTK--YVLLNPYIWLLSFSYVLVYVVRAAINDWGNL-YMSETLGVDLVTANSAVSMFELGG  292 (434)
T ss_pred             cccccchhccccCCChhhhHHH--HHhcChHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccCCCHHHHHHHHHHHHHHH
Confidence            10000 00  011122222221  2577888766554333322222211111111 1112223  235677778889999


Q ss_pred             HHHHHHHhhhhcCC--CChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhcc
Q 021469          171 AICSLAAGRLTTGL--PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFK  248 (312)
Q Consensus       171 ~ig~~~~G~l~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~  248 (312)
                      +++.++.|++.||+  ++|++......+.......... ..+.+ +   ..+.....+.+|+.....++...+...+.+|
T Consensus       293 ~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  367 (434)
T PRK11663        293 FIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLW-LMPFA-S---YVMQAACFFTIGFFVFGPQMLIGMAAAECSH  367 (434)
T ss_pred             HHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHH-Hcccc-c---HHHHHHHHHHHHHHHhhHHHHHHHHHHhccc
Confidence            99999999999997  3333221111111111111111 12211 1   1223344455666544444445566677775


Q ss_pred             C-ChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          249 H-DTEGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       249 ~-~~~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      + +...+.++.+....+|.+++-...+.
T Consensus       368 ~~~~g~~~g~~~~~~~~g~~~~p~~~g~  395 (434)
T PRK11663        368 KEAAGAATGFVGLFAYLGAALSGYPLAK  395 (434)
T ss_pred             HhhHHhHHHHHHHHHHHHHHHhcccHHH
Confidence            4 44678899999988888887555444

>PRK10091 MFS transport protein AraJ; Provisional

Probab=99.03  E-value=1.6e-07  Score=88.60  Aligned_cols=221  Identities=14%  Similarity=0.075  Sum_probs=115.8

Q ss_pred             cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcch
Q 021469           24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASV  102 (312)
Q Consensus        24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~  102 (312)
                      +++++++..|+++.....+..+|..+...+....      ..+..|.+..++..+..+.. ..+|+++++++.       
T Consensus       121 ~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~~-------  187 (382)
T PRK10091        121 KPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF------SWRYTFLLIAVFNIAVLASIYFWVPDIRDEAKG-------  187 (382)
T ss_pred             ChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc------cHHHHHHHHHHHHHHHHHHHHHhCCCCCccccc-------
Confidence            3457889999999888899988887765553321      13455655555544444332 345443221110       


Q ss_pred             hhhhHHHHHHHHHHHhhcChhhHHHHHHHHh--hhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHh
Q 021469          103 NFYSYLVSLSKSITTLLADVRMLLIIPLFAY--SGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAG  178 (312)
Q Consensus       103 ~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~--~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G  178 (312)
                          ..    ++.++.++|++...+......  .+.. . +.+..+. +.....|  .+..++.....+++.+++.++.|
T Consensus       188 ----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~-~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g  256 (382)
T PRK10091        188 ----GL----REQFHFLRSPAPWLIFAATMFGNAGVF-A-WFSYIKP-YMMFISGFSETSMTFIMMLVGLGMVLGNLLSG  256 (382)
T ss_pred             ----CH----HHHHHHhcChHHHHHHHHHHHHHHHHH-H-HHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHh
Confidence                01    122355677776544332221  1111 1 1111111 1111122  34678888899999999999999


Q ss_pred             hhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHH
Q 021469          179 RLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQL  258 (312)
Q Consensus       179 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~  258 (312)
                      ++.||+++|+ +...+..+....+.+.. ..+++     ++...++.++++++.....+..........++++....+..
T Consensus       257 ~l~~r~~~~~-~~~~~~~~~~i~~~~~~-~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (382)
T PRK10091        257 RLSGRYSPLR-IAAVTDFIIVLALLMLF-FFGGM-----KTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGG  329 (382)
T ss_pred             eeccccCchh-HHHHHHHHHHHHHHHHH-HHHhh-----HHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHHH
Confidence            9999998665 33344444333333221 12221     12344455556665544444333333333333333344445


Q ss_pred             HHHHHHHHHHHHHhhhh
Q 021469          259 KVWQCASIAVVFFIGPY  275 (312)
Q Consensus       259 ~~~qs~g~ai~f~~~~~  275 (312)
                      +....+|.+++-.+.+.
T Consensus       330 ~~~~~~g~~~Gp~~~G~  346 (382)
T PRK10091        330 QIAFNLGSAIGAYCGGM  346 (382)
T ss_pred             HHHHHHHHHHHHHHhHH
Confidence            66667777777776664

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.03  E-value=5.3e-08  Score=90.66  Aligned_cols=238  Identities=11%  Similarity=0.027  Sum_probs=121.6

Q ss_pred             cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCc--CCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcc
Q 021469           24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG--STSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADAS  101 (312)
Q Consensus        24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~--~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~  101 (312)
                      ++++|++..++.......+.++|+++...+.....+.  ..-..+..|.+..++..++..+...++++++.++++++  +
T Consensus       126 ~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  203 (394)
T TIGR00883       126 PPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEK--H  203 (394)
T ss_pred             CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhc--c
Confidence            3568999999999988999999988776553211110  01112344544444444443333333332221111101  0


Q ss_pred             hhhhhHHHHHHHHHHHhhcChh--hHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHH
Q 021469          102 VNFYSYLVSLSKSITTLLADVR--MLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAA  177 (312)
Q Consensus       102 ~~~~~s~~~~~~~~~~~~~~~~--~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~  177 (312)
                      ++.+.+.       .+.+++++  .+...-..+..+..........+ .+..+..|  ....+.++...++.+.++..+.
T Consensus       204 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  275 (394)
T TIGR00883       204 KKKRGPI-------RETLTKHRKPFLLGLGLVIATTTTFYLITTYLP-TYLTQTLGLSANSALLVLMLSLILFFITIPLS  275 (394)
T ss_pred             ccccCCH-------HHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCChhHHHHHHHHHHHHHHHHHHHH
Confidence            0111122       22333443  33322222222221111111111 11111122  3457778888899999999999


Q ss_pred             hhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHH
Q 021469          178 GRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFA  256 (312)
Q Consensus       178 G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa  256 (312)
                      |++.||++||+.+...+.+.....+........++ +   .+......++.|++.+..+....+.+.+.+|++. ..+++
T Consensus       276 g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~  351 (394)
T TIGR00883       276 GALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSG-S---FTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGAS  351 (394)
T ss_pred             HHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCC-c---hHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEee
Confidence            99999998776443333322222212111111111 1   2344556677888888888888999999998654 45666


Q ss_pred             H-HHHHHHHHHHHHHHhhhh
Q 021469          257 Q-LKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       257 ~-~~~~qs~g~ai~f~~~~~  275 (312)
                      + +.....+|..++-.+.+.
T Consensus       352 ~~~~~~~~~g~~~~p~~~g~  371 (394)
T TIGR00883       352 LAYNLAGAIFGGFAPYIAAA  371 (394)
T ss_pred             ehhHhHHHHHhhHHHHHHHH
Confidence            5 344455566555555444

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>TIGR00895 2A0115 benzoate transport

Probab=99.02  E-value=2.7e-08  Score=92.90  Aligned_cols=110  Identities=14%  Similarity=0.023  Sum_probs=78.4

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ...+......+++.+++..+.|++.||+++| .......+..+..+.+.. .. ++     ++...+..+++|++.+..+
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~-~~-~~-----~~~~~~~~~~~g~~~~~~~  356 (398)
T TIGR00895       285 SLAATGGALFNFGGVIGSIIFGWLADRLGPR-VTALLLLLGAVFAVLVGS-TL-FS-----PTLLLLLGAIAGFFVNGGQ  356 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcchH-HHHHHHHHHHHHHHHHHH-Hh-hC-----HHHHHHHHHHHHHHHHHHH
Confidence            4567888889999999999999999999866 343333333222222211 11 11     2345677788999999888


Q ss_pred             hhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhh
Q 021469          237 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       237 t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~  274 (312)
                      .....++.+.+|++. ..++++......+|.+++-.+.+
T Consensus       357 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G  395 (398)
T TIGR00895       357 SGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAG  395 (398)
T ss_pred             HHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence            999999999987644 57899999988888888766554

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=99.02  E-value=1.2e-07  Score=91.50  Aligned_cols=266  Identities=9%  Similarity=-0.037  Sum_probs=124.0

Q ss_pred             cCceeechhhHHHHHHHHhHh-hhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHH-HHhccCCcccc----cc--
Q 021469           24 EGTVIGSFNGEFWGMFASHQF-VGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKG----EK--   95 (312)
Q Consensus        24 ~~~~~g~~~gifw~i~~~s~i-iG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l-~lfL~~~~~~~----~~--   95 (312)
                      +++.|++..|++....+.+.. .|.++........      ..+..|.+..++.++..++ .+++|+++++.    ++  
T Consensus       150 ~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~------gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  223 (452)
T PRK11273        150 SQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFN------DWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEY  223 (452)
T ss_pred             ChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhc------cHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhh
Confidence            346789999998777776653 3333322222111      1244555555555554333 45565432210    00  


Q ss_pred             --chhhc---chhhhhHHHHHHHHHHHhhcChhhHHHHHHHHh-hhhHhhhhhhcccccccccc--cccchhhHHHHHHh
Q 021469           96 --ETADA---SVNFYSYLVSLSKSITTLLADVRMLLIIPLFAY-SGLQQAFVWAEFTKEIVTPA--LGVSGVGGAMAVYG  167 (312)
Q Consensus        96 --~~~~~---~~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~-~G~~~~f~~~~~~~~~~s~~--lg~~~~g~v~~~~g  167 (312)
                        |..+.   +.+++.+.++.+.  ..+++||+.+.+.-..+. .....++ ...+|. +..+.  ++....+.....++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~P~-~l~~~~g~s~~~~~~~~~~~~  299 (452)
T PRK11273        224 KNDYPDDYNEKHEQELTAKQIFM--QYVLPNKLLWYIAIANVFVYLLRYGI-LDWSPT-YLKEVKHFALDKSSWAYFLYE  299 (452)
T ss_pred             hhccccccccccCCCccHHHHHH--HHHHcChHHHHHHHHHHHHHHHHHHH-HHHHHH-HHHHhcCCCHHHHHHHHHHHH
Confidence              00000   0011112233221  135678876544333222 2221111 111222 21221  22345677777888


Q ss_pred             HHHHHHHHHHhhhhcCC--CChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHH
Q 021469          168 AFDAICSLAAGRLTTGL--PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGI  245 (312)
Q Consensus       168 ~~~~ig~~~~G~l~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~  245 (312)
                      ++.+++.++.|++.||+  +||.........+..............+     ++...+..+..|+.-.......++...+
T Consensus       300 ~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~  374 (452)
T PRK11273        300 YAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGN-----PTVDMACMIVIGFLIYGPVMLIGLHALE  374 (452)
T ss_pred             HHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccC-----hHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            99999999999999998  3333222222222112211111111111     1122233344444322222334455567


Q ss_pred             hccCC-hhhhHHHHHHHHHHHHHH-HHHhhhhh----hHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 021469          246 LFKHD-TEGAFAQLKVWQCASIAV-VFFIGPYI----SLQAMLIVMVVGICVALVGILFLTIQVE  304 (312)
Q Consensus       246 ~~~~~-~~~afa~~~~~qs~g~ai-~f~~~~~l----~~~~~~~il~~~~~~~~~~~~~~~~~~~  304 (312)
                      .+|++ ...++++.+....+|.++ +-.+.+.+    .....+.+..+.++++.+...++.+.++
T Consensus       375 ~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~  439 (452)
T PRK11273        375 LAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK  439 (452)
T ss_pred             HcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            77754 467899998888777654 44444433    2233444555666666665554443333

>PRK12307 putative sialic acid transporter; Provisional

Probab=99.01  E-value=6.9e-08  Score=91.94  Aligned_cols=114  Identities=9%  Similarity=-0.043  Sum_probs=70.1

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ...+..+...+++++++..+.|++.||++||+ .+..+.++......... ..+.+ +   ..+..++.+.+++......
T Consensus       266 ~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~-~~~~~~~~~~~~~~~~~-~~~~~-~---~~~~~~~~~~~~~~~~~~~  339 (426)
T PRK12307        266 GVVSNLMTAAAFGTVLGNIVWGLCADRIGLKK-TFSIGLLMSFLFIFPLF-RIPQD-N---YLLLGACLFGLMATNVGVG  339 (426)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHH-HHccc-c---HHHHHHHHHHHHHhcccHh
Confidence            45677788899999999999999999998765 44455444433322221 11211 1   1111122222333333334


Q ss_pred             hhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          237 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       237 t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ...+.++.+.+|++. ..+.++......+|..++-.+.+.+
T Consensus       340 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l  380 (426)
T PRK12307        340 GLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWL  380 (426)
T ss_pred             HHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHH
Confidence            455667788888654 6788888888888888877766654

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.00  E-value=3.2e-08  Score=90.47  Aligned_cols=224  Identities=16%  Similarity=0.142  Sum_probs=142.6

Q ss_pred             cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchh
Q 021469           24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVN  103 (312)
Q Consensus        24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~  103 (312)
                      ++++|++..++.....+.+..+|..+...+....+      .+..|.+..++.+++.+...+++                
T Consensus       117 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~----------------  174 (352)
T cd06174         117 PPKERGRALGLFSAGFGLGALLGPLLGGLLAESLG------WRWLFLILAILGLLLALLLLFLL----------------  174 (352)
T ss_pred             CccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHHHHHHHH----------------
Confidence            34789999999999999999999998877754321      24566666666666666655553                


Q ss_pred             hhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhccccccccc--ccccchhhHHHHHHhHHHHHHHHHHhhhh
Q 021469          104 FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP--ALGVSGVGGAMAVYGAFDAICSLAAGRLT  181 (312)
Q Consensus       104 ~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~--~lg~~~~g~v~~~~g~~~~ig~~~~G~l~  181 (312)
                                        |++..+....+.............+ .+..+  -....+.+......++++.++..+.|++.
T Consensus       175 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  235 (352)
T cd06174         175 ------------------RLLLLLALAFFLLSFGYYGLLTYLP-LYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLS  235 (352)
T ss_pred             ------------------HHHHHHHHHHHHHHhHHHHHHHHHH-HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                              2222111111111111111111111 11111  11235678888899999999999999999


Q ss_pred             cCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccC-ChhhhHHHHHH
Q 021469          182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH-DTEGAFAQLKV  260 (312)
Q Consensus       182 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~-~~~~afa~~~~  260 (312)
                      ||+++|+..+..+..+...+..+.. .. ++     .+..++..++.|++.+..++.....+.+..|+ ++.+++++...
T Consensus       236 ~~~~~~~~~~~~~~~~~~i~~~~~~-~~-~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (352)
T cd06174         236 DRLGRRRLLLLIGLLLAALGLLLLA-LA-PS-----LALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNT  308 (352)
T ss_pred             HHHHhhhHHHHHHHHHHHHHHHHHH-Hh-cc-----HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHH
Confidence            9988664144455555544443322 11 11     24577889999999999999999999999884 45689999999


Q ss_pred             HHHHHHHHHHHhhhhhh----HHHHHHHHHHHHHHHHHH
Q 021469          261 WQCASIAVVFFIGPYIS----LQAMLIVMVVGICVALVG  295 (312)
Q Consensus       261 ~qs~g~ai~f~~~~~l~----~~~~~~il~~~~~~~~~~  295 (312)
                      .+++|..++-.+.+.+.    ...-..+..++.+++.+.
T Consensus       309 ~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~  347 (352)
T cd06174         309 FGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALL  347 (352)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHH
Confidence            99999999988877642    223334444444444443

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=98.98  E-value=1.5e-07  Score=100.61  Aligned_cols=238  Identities=18%  Similarity=0.156  Sum_probs=133.8

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCC----CcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhc
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK----GGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADA  100 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~----~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~  100 (312)
                      ++++++..|+.....+.+.++|.++...+.....    +........++.+...+.+++.++.+++|+.+...+...++ 
T Consensus       134 ~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  212 (1146)
T PRK08633        134 KENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDK-  212 (1146)
T ss_pred             cccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccc-
Confidence            4689999999999999999999988876653200    00001112233333333444444445555432221111000 


Q ss_pred             chhhhhHHHHHHHHHHH-hhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cc-hhhHHHHHHhHHHHHHHHH
Q 021469          101 SVNFYSYLVSLSKSITT-LLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VS-GVGGAMAVYGAFDAICSLA  176 (312)
Q Consensus       101 ~~~~~~s~~~~~~~~~~-~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~-~~g~v~~~~g~~~~ig~~~  176 (312)
                        .+.... ++.++.++ ++++|..+.++.......+........++..+ ...+|  .. ..|+++.+.+++.++++++
T Consensus       213 --~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~~g~~~~~~~ig~~~g~~~  288 (1146)
T PRK08633        213 --KKYLFP-KLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYA-KEVLGLDNTFQVQYLLAASAIGIGIGSLL  288 (1146)
T ss_pred             --cccccH-HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHhCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence              011111 22223333 46666655444332222222212222222111 12123  23 5688888999999999999


Q ss_pred             HhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhH
Q 021469          177 AGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAF  255 (312)
Q Consensus       177 ~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~af  255 (312)
                      .|++.||++++. ++.++.++...+.++.  .+.++     .+...+..+++|++.+......++++....|++ +..++
T Consensus       289 ~g~l~~r~~~~~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~  360 (1146)
T PRK08633        289 AGRLSGRHIELG-LVPLGALGLALSLFLL--PTAPS-----LASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVL  360 (1146)
T ss_pred             HHHHhCCceEcc-chhHHHHHHHHHHHHH--HHhhh-----HHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhh
Confidence            999999987554 3334443333332222  12121     234667788899999988888888888887654 46789


Q ss_pred             HHHHHHHHHHHHHHHHhhhh
Q 021469          256 AQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       256 a~~~~~qs~g~ai~f~~~~~  275 (312)
                      ++..+++++|..++..+...
T Consensus       361 ~~~~~~~~lg~~~~~~~~~~  380 (1146)
T PRK08633        361 AANNFLQNVGMLLFLALTTL  380 (1146)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            99999999988766655543

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=98.98  E-value=2.9e-07  Score=86.94  Aligned_cols=229  Identities=10%  Similarity=0.043  Sum_probs=124.1

Q ss_pred             ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhhh
Q 021469           26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFY  105 (312)
Q Consensus        26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~~  105 (312)
                      ++++...++...-...|.++|+.....+....+      .+..|.+..++..+..+..+++++++++++++ +      +
T Consensus       129 ~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~g------w~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~-~------~  195 (390)
T TIGR02718       129 RTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFG------QRPAFLLVACVPLASLVCVLWLKDRAVASPEA-P------L  195 (390)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------HHHHHHHHHHHHHHHHHHHHHcCCCCcCcccc-c------h
Confidence            344555565666666677777755544443211      24567777777766666665665433221110 0      0


Q ss_pred             hHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhccccccccc-ccccchhhHHHHHHhHHH-HHHHHHHhhhhcC
Q 021469          106 SYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP-ALGVSGVGGAMAVYGAFD-AICSLAAGRLTTG  183 (312)
Q Consensus       106 ~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~-~lg~~~~g~v~~~~g~~~-~ig~~~~G~l~d~  183 (312)
                          ++.++..+.+|+|+.+.+....+......+...+..+ .+..+ -.+.+++|.+....++.+ +++.++.|++.||
T Consensus       196 ----~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r  270 (390)
T TIGR02718       196 ----ARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSK-LYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRR  270 (390)
T ss_pred             ----hhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhh-HHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence                1123345678888876555544433332222222211 12122 123457888887777644 5668899999999


Q ss_pred             CCChhhHHHHHHHHH-HHHHHHHHh-cccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccC--ChhhhHHHHH
Q 021469          184 LPSITFIVSGGAIAQ-VVVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH--DTEGAFAQLK  259 (312)
Q Consensus       184 ~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~--~~~~afa~~~  259 (312)
                      +++|+.+ .++.++. .....+... .....+   .+...+....+.+++.+......+....+..++  .....++..+
T Consensus       271 ~g~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~  346 (390)
T TIGR02718       271 AGLWRTF-ILGVGLAGSLALLWFAQAAFWLAP---GIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQ  346 (390)
T ss_pred             hhHHHHH-HHHHHHHHHHHHHHHHHHHcccCC---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHH
Confidence            9876533 3344333 212111111 110110   112233344455566666666666666666543  3467899999


Q ss_pred             HHHHHHHHHHHHhhhhh
Q 021469          260 VWQCASIAVVFFIGPYI  276 (312)
Q Consensus       260 ~~qs~g~ai~f~~~~~l  276 (312)
                      ..+++|..++-.+++.+
T Consensus       347 ~~~~lg~~~g~~~~G~l  363 (390)
T TIGR02718       347 STRDLGELIASSIAGYL  363 (390)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999998887765

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>TIGR00891 2A0112 putative sialic acid transporter

Probab=98.97  E-value=7.2e-08  Score=90.46  Aligned_cols=115  Identities=11%  Similarity=-0.010  Sum_probs=76.5

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      ....+.+...++++++++..+.|++.||++||+ .+.++.+.......... ...++     .+...+..++.|++.+..
T Consensus       273 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~-~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~  345 (405)
T TIGR00891       273 PHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRK-AYVCSLLAGQLLIIPVF-AIGAN-----VAVLGLGLFFQQMLVQGI  345 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchh-hhHHHHHHHHHHHHHHH-HhCCc-----hHHHHHHHHHHHHHHccc
Confidence            346788888899999999999999999998765 33344433322111111 12111     122333445566666555


Q ss_pred             hhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhhh
Q 021469          236 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS  277 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l~  277 (312)
                      .......+.+.+|++ +.+++++.+...++|..++-.+.+.+.
T Consensus       346 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~  388 (405)
T TIGR00891       346 WGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLA  388 (405)
T ss_pred             hhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence            666777888888754 467899999999999998888777653

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=98.96  E-value=2.8e-08  Score=94.79  Aligned_cols=119  Identities=11%  Similarity=0.054  Sum_probs=70.3

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHH-hcccCCCCC---CCchHHHHHHHHHHhhh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL-INYSVTSGV---LGTLYPLIMAALLGIGD  232 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~l~G~~d  232 (312)
                      ...+......+++.+++.++.|++.||++||+.+ ..+.++...++.+.. ..+....+.   ..........++.+...
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (481)
T TIGR00879       319 DHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLL-LIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFA  397 (481)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH-HHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHH
Confidence            3456777788889999999999999999877533 344444443333222 112111110   01111222223333333


Q ss_pred             hHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          233 GVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       233 ~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ..+....+.++.+.+|++ +..+.++......+|..++-.+.+.+
T Consensus       398 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~  442 (481)
T TIGR00879       398 MGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTM  442 (481)
T ss_pred             ccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334455566668888754 46789999999999888877766643

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=98.95  E-value=4.6e-07  Score=86.52  Aligned_cols=235  Identities=14%  Similarity=0.071  Sum_probs=126.3

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcC-CCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcch
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKD-DKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASV  102 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~-~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~  102 (312)
                      +++|++..++-......+.++++++...+... .+..+....+..+.+..++..+..++. .++++++++++++ +    
T Consensus       131 ~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~-~----  205 (437)
T TIGR00792       131 PRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKN-I----  205 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcc-c----
Confidence            35678888876666666666665554333221 111011122344555555544444433 2333322111111 0    


Q ss_pred             hhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc-cchhhHHHHHHhHHHHHHHHHHhhhh
Q 021469          103 NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG-VSGVGGAMAVYGAFDAICSLAAGRLT  181 (312)
Q Consensus       103 ~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg-~~~~g~v~~~~g~~~~ig~~~~G~l~  181 (312)
                      +++.+.++.+|   +++++|+.+.+.-..+...+......+. ..-+.+..++ ....+.......++.++++.+.+++.
T Consensus       206 ~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~  281 (437)
T TIGR00792       206 EKKLSLKQIFK---ALFKNDQLLILCLAYLFYNLAFNIKNGV-QVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLV  281 (437)
T ss_pred             ccCCCHHHHHH---HHhCCHHHHHHHHHHHHHHHHHHHHcch-hheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11123344333   3467887755544333332222222111 1111111223 23455666677889999999999999


Q ss_pred             cCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhcc-------C-Chhh
Q 021469          182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFK-------H-DTEG  253 (312)
Q Consensus       182 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~-------~-~~~~  253 (312)
                      ||+++|+ ++..+.++....+....  +.++    +.+...+..++.|++.+..+...++++++..+       + ....
T Consensus       282 ~r~g~~~-~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~  354 (437)
T TIGR00792       282 KKFGRKI-LFAGGILLMVLGYLIFF--FAGS----NLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGL  354 (437)
T ss_pred             HHhCcHH-HHHHHHHHHHHHHHHHH--Hcch----hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHH
Confidence            9998765 44556555544443322  2222    12345566778888888888888888877643       1 2246


Q ss_pred             hHHHHHHHHHHHHHHHHHhhhh
Q 021469          254 AFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       254 afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      +++++++.+.+|.+++-.+.+.
T Consensus       355 ~~~~~~~~~~~g~~lg~~i~g~  376 (437)
T TIGR00792       355 VYSVRTFVRKLGQALAGFLVGL  376 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            7899999999999888776654

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=98.95  E-value=2e-07  Score=88.41  Aligned_cols=223  Identities=10%  Similarity=-0.040  Sum_probs=114.5

Q ss_pred             ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhhh
Q 021469           26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFY  105 (312)
Q Consensus        26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~~  105 (312)
                      ++|++..|++......+..+|+.+...+.....     ..+..+.++.+..++..+..++.++.+++++++       ++
T Consensus       128 ~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~-----~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~  195 (393)
T PRK09705        128 QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSE-----TWYQTLAWWALPAVVALFAWWWQSAREVASSHK-------TT  195 (393)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CHHHHHHHHHHHHHHHHHHHHHHhcCCCccccC-------CC
Confidence            568999999998888899999988765543211     123334344343333333333332211111100       00


Q ss_pred             hHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCC
Q 021469          106 SYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLP  185 (312)
Q Consensus       106 ~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~  185 (312)
                      .       +..+.+++++.+.+...+....+.........+.-+....+.....|+....++++.++|.++.|++.||++
T Consensus       196 ~-------~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~  268 (393)
T PRK09705        196 T-------TPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQD  268 (393)
T ss_pred             c-------CCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            0       012345666654443333222221111111111111111122345788889999999999999999999998


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccC--ChhhhHHHHHHHHH
Q 021469          186 SITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH--DTEGAFAQLKVWQC  263 (312)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~--~~~~afa~~~~~qs  263 (312)
                      +|+ .+..+..+......... ..+++.     ..  +..++.|++-+...........+.+++  +...+++..+....
T Consensus       269 ~~~-~~~~~~~l~~~~~~~~~-~~~~~~-----~~--~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~  339 (393)
T PRK09705        269 RRK-LLMLALVLQLVGFCGFI-WLPLQL-----PV--LWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGF  339 (393)
T ss_pred             chH-HHHHHHHHHHHHHHHHH-HccchH-----HH--HHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Confidence            765 33444444433333221 123221     11  122345665555555555455555543  23457888887777


Q ss_pred             HHHHHHHHhhhhh
Q 021469          264 ASIAVVFFIGPYI  276 (312)
Q Consensus       264 ~g~ai~f~~~~~l  276 (312)
                      ++..++-.+.+.+
T Consensus       340 ~~~~~gp~~~G~l  352 (393)
T PRK09705        340 IIAGLAPWFSGVL  352 (393)
T ss_pred             HHHHHHHHHHHHH
Confidence            7776666555544

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=98.95  E-value=3.6e-07  Score=86.14  Aligned_cols=224  Identities=11%  Similarity=0.021  Sum_probs=114.4

Q ss_pred             cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcch
Q 021469           24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASV  102 (312)
Q Consensus        24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~  102 (312)
                      ++++|++..|+.......+.++|.++...+....+      .+..|.+..++.++..++. .++|++++++ ++ +    
T Consensus       121 ~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~-~----  188 (392)
T PRK10473        121 DDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFP------WQSLFYTMAAMGILVLLLSLFILKETRPAR-AP-A----  188 (392)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC------hHHHHHHHHHHHHHHHHHHHHHcCCCCCcc-cC-C----
Confidence            34678999999999988888888888766543211      2455666666666665554 3444332211 11 0    


Q ss_pred             hhhhHHHHHHHHHHHhhcChhhHHHHHHHH-hhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhh
Q 021469          103 NFYSYLVSLSKSITTLLADVRMLLIIPLFA-YSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGR  179 (312)
Q Consensus       103 ~~~~s~~~~~~~~~~~~~~~~~lll~p~~~-~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~  179 (312)
                        +.+   ..++..+.++|++.+....... .......+. ...+. +.....|  ....++.+...+++.+++..+.|+
T Consensus       189 --~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~  261 (392)
T PRK10473        189 --ASS---KPRENSESLLNRFFLSRLVITTLSVTVILTFV-NTSPV-LLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPF  261 (392)
T ss_pred             --ccc---hHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH-HhCHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              001   1123345567777644332221 111111111 11111 1111123  345788888999999999999999


Q ss_pred             hhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccC--ChhhhHHH
Q 021469          180 LTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH--DTEGAFAQ  257 (312)
Q Consensus       180 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~--~~~~afa~  257 (312)
                      +.||+++|+ .+.++.++......... .. +..+   ........+..|++.+.-..    ......|+  +...+.++
T Consensus       262 l~~r~g~~~-~~~~~~~~~~~~~~~~~-~~-~~~~---~~~~~~~l~~~g~~~~~~~~----~~~~~~~~~~~~g~~~~~  331 (392)
T PRK10473        262 ALGIFKPRT-LMLTSQVLFLAAGITLA-LS-PSHA---VSLFGITLICAGFSVGFGVA----MSQALGPFSLRAGVASST  331 (392)
T ss_pred             HHHhcCHHH-HHHHHHHHHHHHHHHHH-HH-HHHH---HHHHHHHHHHHHHHHHhHHH----HHHHhccCcccccHHHHH
Confidence            999998765 44455444433333222 11 1100   01122222233333322111    11223332  22456677


Q ss_pred             HHHHHHHHHHHHHHhhhhh
Q 021469          258 LKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       258 ~~~~qs~g~ai~f~~~~~l  276 (312)
                      ..+.|.+|.+++-.+...+
T Consensus       332 ~~~~~~~g~~~~~~l~~~~  350 (392)
T PRK10473        332 LGIAQVCGSSLWIWLAAVL  350 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            7777777777775555443

>PRK12382 putative transporter; Provisional

Probab=98.93  E-value=4.9e-07  Score=85.29  Aligned_cols=113  Identities=14%  Similarity=0.121  Sum_probs=80.2

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      .+..++.+..++++.+++..+.|++.||+++|+ .+..+..+....+.+..  ..++     .+...+..+++|++.+..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~-~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~l~g~~~~~~  319 (392)
T PRK12382        248 WAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVK-VAIVSLLVETVGLLLLW--LAPT-----AWVALAGAALTGAGCSLI  319 (392)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCe-ehHHHHHHHHHHHHHHH--Hccc-----HHHHHHHHHHHHHHHHhH
Confidence            344566677788889999999999999998765 33445444444443322  2222     234566778889998887


Q ss_pred             hhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          236 NTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       236 ~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      .......+.+.+++ ++.++++++.....+|.+++-.+.+.+
T Consensus       320 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l  361 (392)
T PRK12382        320 FPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGML  361 (392)
T ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            77777788888864 446899999999999998888777654

>TIGR00898 2A0119 cation transport protein

Probab=98.93  E-value=2.5e-07  Score=90.30  Aligned_cols=232  Identities=13%  Similarity=-0.016  Sum_probs=126.6

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccc----cccchhh-
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK----GEKETAD-   99 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~----~~~~~~~-   99 (312)
                      ++.|++..++.......|.+++.+++..+..         .+..|.+..+..++..+...++|+..+.    .+.++.. 
T Consensus       211 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---------wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~  281 (505)
T TIGR00898       211 KKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---------WRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALK  281 (505)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---------HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHH
Confidence            3578899999888888888888887765421         3456666666666666666667653221    1111000 


Q ss_pred             ------------cchhh-hhHHHHH---H---HHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccccchhh
Q 021469          100 ------------ASVNF-YSYLVSL---S---KSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVG  160 (312)
Q Consensus       100 ------------~~~~~-~~s~~~~---~---~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g  160 (312)
                                  .+.+. .....++   -   ....+++++|+++......+..-+..++...  .-.+....++.+ ..
T Consensus       282 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~  358 (505)
T TIGR00898       282 ILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYY--GLVLDLGNLGGN-IY  358 (505)
T ss_pred             HHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHH--HHhccccccCCC-hH
Confidence                        00000 0000000   0   1234567788875554443332222211110  000111112221 22


Q ss_pred             HHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhH
Q 021469          161 GAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLS  240 (312)
Q Consensus       161 ~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~  240 (312)
                      ......++.++++.++.+.+.||++||. .+.++.++...+.+... .. ++.+   .+...+..++.+++-+......+
T Consensus       359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~-~~~~~~~~~~~~~l~~~-~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~  432 (505)
T TIGR00898       359 LDLFISGLVELPAKLITLLLIDRLGRRY-TMAASLLLAGVALLLLL-FV-PVDL---YFLRTALAVLGKFGITSAFQMVY  432 (505)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCHH-HHHHHHHHHHHHHHHHH-Hc-CCCc---hHHHHHHHHHHHHHHHHHHHHHH
Confidence            3344678889999999999999998775 43444444333332221 22 2211   12344455566666666667788


Q ss_pred             hHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhh
Q 021469          241 ALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       241 ~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~  274 (312)
                      .+..+.+|.+ +..+.++......+|..++-.+..
T Consensus       433 ~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~  467 (505)
T TIGR00898       433 LYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY  467 (505)
T ss_pred             HHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH
Confidence            8888889864 456888888888888877765554

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=98.93  E-value=1.4e-07  Score=91.19  Aligned_cols=240  Identities=11%  Similarity=0.045  Sum_probs=133.7

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHH-hccCCcccc--ccchh---
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC-FLRKEEDKG--EKETA---   98 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~l-fL~~~~~~~--~~~~~---   98 (312)
                      +++|++..|++......+..+|..+...+....+      .+..|.+...+.++..++.. ++|++++++  +.|..   
T Consensus       121 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~------w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~  194 (485)
T TIGR00711       121 PEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYH------WRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLL  194 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcC------ceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHH
Confidence            4688999999999999999999988766543211      23445555555555544443 344322211  11100   


Q ss_pred             --------------hcchhhhhHH------------------HHHHH-----HHHHhhcChhhHHHHHHHHhhhhHhhhh
Q 021469           99 --------------DASVNFYSYL------------------VSLSK-----SITTLLADVRMLLIIPLFAYSGLQQAFV  141 (312)
Q Consensus        99 --------------~~~~~~~~s~------------------~~~~~-----~~~~~~~~~~~lll~p~~~~~G~~~~f~  141 (312)
                                    +.+...+.+.                  .+|.+     ...+++++|+.....-..+..++...-.
T Consensus       195 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (485)
T TIGR00711       195 LLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGS  274 (485)
T ss_pred             HHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHH
Confidence                          0000000000                  00100     0135677777654433332222211100


Q ss_pred             hhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCch
Q 021469          142 WAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTL  219 (312)
Q Consensus       142 ~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (312)
                      .. +...+..+..|  ..+.|+.+...+++.++++.+.|++.||+++|+ .+.++..+......+......++.+   .+
T Consensus       275 ~~-~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~---~~  349 (485)
T TIGR00711       275 FY-LLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRK-LVTIGLILYAVGFYWRAFTFTPDTP---FL  349 (485)
T ss_pred             HH-HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHH-HHHHHHHHHHHHHHHHhccCCCCCC---HH
Confidence            01 11111122223  346788888999999999999999999998765 4455555544443332212222221   22


Q ss_pred             HHHHHHHHHHhhhhHHhhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          220 YPLIMAALLGIGDGVLNTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       220 ~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      ......++.|++.+..............|+ +...+.++++..+.+|.+++-.+.+.
T Consensus       350 ~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~  406 (485)
T TIGR00711       350 AIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITT  406 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344557788888888776666666566664 44678999999999999998877664

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=98.92  E-value=1.4e-07  Score=91.36  Aligned_cols=238  Identities=11%  Similarity=0.007  Sum_probs=133.5

Q ss_pred             ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccC-Ccc-----ccccch--
Q 021469           26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK-EED-----KGEKET--   97 (312)
Q Consensus        26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~-~~~-----~~~~~~--   97 (312)
                      ++|++..|+.......+..+|+.+.-.+....+      .+..|.+..++.++..+...++.+ ++.     ++++++  
T Consensus       139 ~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g------wr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~  212 (455)
T TIGR00892       139 RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG------WRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLP  212 (455)
T ss_pred             hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC------hHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCC
Confidence            568999999988888888888776654443211      345666666666665554444432 211     000010  


Q ss_pred             hhcchhh--hhHHHHHHHHH--HHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHH
Q 021469           98 ADASVNF--YSYLVSLSKSI--TTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAIC  173 (312)
Q Consensus        98 ~~~~~~~--~~s~~~~~~~~--~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig  173 (312)
                      .+.+.++  .....++.++.  ++++++|+.+.+.-..+..++.........+.-......+..+.+.++.+.+++.+++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~  292 (455)
T TIGR00892       213 PDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFA  292 (455)
T ss_pred             CCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence            0000000  01112222222  3678888876555433322221100001111111111123456788888999999999


Q ss_pred             HHHHhhhhcCC--CChhh-HHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC
Q 021469          174 SLAAGRLTTGL--PSITF-IVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD  250 (312)
Q Consensus       174 ~~~~G~l~d~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~  250 (312)
                      ..+.|++.||.  ++|+. ++..+.++...++++.  ...++     ++...+..+++|++.+..+...++++.+.+|++
T Consensus       293 ~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~--~~~~~-----~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~  365 (455)
T TIGR00892       293 RPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLC--ALAGD-----YTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQ  365 (455)
T ss_pred             HHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHH--HHhch-----HHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHH
Confidence            99999999973  32322 2222222222222221  12122     234566788999999888888899999888754


Q ss_pred             h-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          251 T-EGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       251 ~-~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      . ..+++++...+++|..++-.+...+
T Consensus       366 ~~g~~~g~~~~~~~lg~~igp~i~G~l  392 (455)
T TIGR00892       366 RFSSAVGLVTIVECCAVLIGPPLAGRL  392 (455)
T ss_pred             HHhhHHhHHHHHHHHHHHccccceeee
Confidence            3 6789999999999998888776643

>PRK09952 shikimate transporter; Provisional

Probab=98.91  E-value=3.9e-07  Score=87.71  Aligned_cols=108  Identities=10%  Similarity=0.060  Sum_probs=60.3

Q ss_pred             HHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhH
Q 021469          161 GAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLS  240 (312)
Q Consensus       161 ~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~  240 (312)
                      .+..+.++...++..+.|++.||++||+ .+..+.++...+....+......++   .....+..++.|++.+......+
T Consensus       290 ~~~~~~g~~~~i~~~~~g~l~Dr~grr~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~  365 (438)
T PRK09952        290 NIGLLVGGLSCLTIPCFAWLADRFGRRR-VYITGALIGTLSAFPFFMALEAQSI---FWIVFFSIMLANIAHDMVVCVQQ  365 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCchH-HHHHHHHHHHHHHHHHHHHHHcCCh---HHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444567778888899999999998775 3334444333222211111111110   12233445666788777777788


Q ss_pred             hHHHHhccCCh-hhhHHH-HHHHHHHHHHHHHHh
Q 021469          241 ALLGILFKHDT-EGAFAQ-LKVWQCASIAVVFFI  272 (312)
Q Consensus       241 ~i~g~~~~~~~-~~afa~-~~~~qs~g~ai~f~~  272 (312)
                      .++.+.+|.+. ..+.+. ++....+|.+++=.+
T Consensus       366 ~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i  399 (438)
T PRK09952        366 PMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFI  399 (438)
T ss_pred             HHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHH
Confidence            88999998644 234444 333333454444333

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=98.91  E-value=7.7e-07  Score=83.98  Aligned_cols=229  Identities=14%  Similarity=0.055  Sum_probs=118.8

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHH-HHhccCCccccccchhhcchh
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVN  103 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l-~lfL~~~~~~~~~~~~~~~~~  103 (312)
                      ++++++..++.......+..+|..+...+....      ..+..|.+..++..+..++ ..++|++++++++        
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~------g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  192 (394)
T PRK11652        127 GTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF------GWRACYLFLLLLGAGVTFSMARWMPETRPADAR--------  192 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------ChHHHHHHHHHHHHHHHHHHHHhCCccCccccc--------
Confidence            356778888777777777777777665543321      1244555544444433333 3344432221111        


Q ss_pred             hhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhccccccccccccc--chhhHHHHHHhHHHHHHHHHHhhhh
Q 021469          104 FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLT  181 (312)
Q Consensus       104 ~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~--~~~g~v~~~~g~~~~ig~~~~G~l~  181 (312)
                       +.+.++.   ..+.++||+.+......+.............+. +..+..|.  ...|+......++..+++.+.+++.
T Consensus       193 -~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~  267 (394)
T PRK11652        193 -RTRVLAS---YRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGV-LMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPN  267 (394)
T ss_pred             -hhHHHHH---HHHHHcChHHHHHHHHHHHHHHHHHHHHHhChH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             1111222   223456776543222211111111111111111 11122232  3567777778888888999999998


Q ss_pred             cCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHH
Q 021469          182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVW  261 (312)
Q Consensus       182 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~  261 (312)
                      ||.+++..............+ + ...+....   +.+......+++|++-+..+....+...+.+|++...+.++....
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  342 (394)
T PRK11652        268 KRFSTLMWQSVICCLLAGLLM-W-IPGWFGVM---NVWTLLVPAALFFFGAGMLFPLATSGAMEPFPYLAGTAGALLGGL  342 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-H-HHHHhccc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHH
Confidence            877522211111111111111 1 11111111   123355567788888888788888777777787777788999999


Q ss_pred             HHHHHHHHHHhhhhhh
Q 021469          262 QCASIAVVFFIGPYIS  277 (312)
Q Consensus       262 qs~g~ai~f~~~~~l~  277 (312)
                      +.+|.+++-.+...+.
T Consensus       343 ~~lg~~~~~~~~~~~~  358 (394)
T PRK11652        343 QNIGSGLAALLSAMLP  358 (394)
T ss_pred             HHHHHHHHHHHHHHcc
Confidence            9999988887776653

>PRK11010 ampG muropeptide transporter; Validated

Probab=98.91  E-value=1.2e-06  Score=85.71  Aligned_cols=252  Identities=15%  Similarity=0.086  Sum_probs=125.8

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF  104 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~  104 (312)
                      +++|++..++......++.++|+.+...+....     ...+..|.+..++..+..+..+++|+|++.++++ +    +.
T Consensus       138 ~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~-----~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~~~~-~----~~  207 (491)
T PRK11010        138 AEERGAGAAISVLGYRLAMLVSGGLALWLADRY-----LGWQGMYWLMAALLIPCIIATLLAPEPTDTIPVP-K----TL  207 (491)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cCHHHHHHHHHHHHHHHHHHHHhcCCCccccccc-c----ch
Confidence            467999999999999999999988876665411     1245667777666666655555666553221111 0    00


Q ss_pred             hhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHH-hHHHHHHHHHHhhhh
Q 021469          105 YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVY-GAFDAICSLAAGRLT  181 (312)
Q Consensus       105 ~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~-g~~~~ig~~~~G~l~  181 (312)
                      ++...+.+++   .+++++..++....+...+...+.....+.-+ .+..|  .+.+|++.... .++.++|+++.|++.
T Consensus       208 ~~~~~~~l~~---~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l-~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~  283 (491)
T PRK11010        208 EQAVVAPLRD---FFGRNNAWLILLLIVLYKLGDAFAMSLTTTFL-IRGVGFDAGEVGLVNKTLGLLATIVGALYGGILM  283 (491)
T ss_pred             hhhHHHHHHH---HHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1112223333   44555543332222222222222211111111 11123  35677776444 468999999999999


Q ss_pred             cCCCChhhHHHHHHHHHHHHH-HHHHhcccCCCCCCCchHHHHHHHH----HHhhhhHHhhhhHhHHHHhccCC-hhhhH
Q 021469          182 TGLPSITFIVSGGAIAQVVVF-LWILINYSVTSGVLGTLYPLIMAAL----LGIGDGVLNTQLSALLGILFKHD-TEGAF  255 (312)
Q Consensus       182 d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l----~G~~d~~~~t~~~~i~g~~~~~~-~~~af  255 (312)
                      ||+++|+.++ ++.++..... .+..+...++ +   .+......++    .|++.+..    ..+...+.+++ ....+
T Consensus       284 dr~g~~~~l~-i~~~l~~l~~l~~~~l~~~~~-~---~~~l~~~~~l~~~~~g~~~~~~----~a~~~~l~~~~~~~t~~  354 (491)
T PRK11010        284 QRLSLFRALM-IFGILQGVSNAGYWLLSITDK-N---LYSMGAAVFFENLCGGMGTAAF----VALLMTLCNKSFSATQF  354 (491)
T ss_pred             HHHhHHHHHH-HHHHHHHHHHHHHHHHHhccc-c---HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHcCCCCcHHHH
Confidence            9998765443 3333322221 1111111111 1   1112222333    45445443    44444555433 35678


Q ss_pred             HHHHHHHHHHHHHHHHhhhhh----hHHHHHHHHHHHHHHHHHHHHHh
Q 021469          256 AQLKVWQCASIAVVFFIGPYI----SLQAMLIVMVVGICVALVGILFL  299 (312)
Q Consensus       256 a~~~~~qs~g~ai~f~~~~~l----~~~~~~~il~~~~~~~~~~~~~~  299 (312)
                      ++.+...++|..++-.+.+.+    ....-+.+..++.+.+++.....
T Consensus       355 gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~  402 (491)
T PRK11010        355 ALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC  402 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence            888888888877655555543    11122333334445554444443

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=98.91  E-value=9.9e-07  Score=84.29  Aligned_cols=231  Identities=14%  Similarity=0.077  Sum_probs=126.0

Q ss_pred             cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcch
Q 021469           24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASV  102 (312)
Q Consensus        24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~  102 (312)
                      ++++++|..+++....+.+.++|.++...+....      ..+..|.+..++.+++.+.. .++|+++++++++      
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~------gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~------  201 (413)
T PRK15403        134 GQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV------HWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAVP------  201 (413)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCC------
Confidence            3467889999999999999999988886665321      13556777777777666543 3455432211110      


Q ss_pred             hhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhH-hhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhh
Q 021469          103 NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQ-QAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGR  179 (312)
Q Consensus       103 ~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~-~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~  179 (312)
                         .+.++..++..++++||++......+...... .++. ...|. +..+..|  ....++.....+.+..+++.+.++
T Consensus       202 ---~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~-~~~P~-~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~  276 (413)
T PRK15403        202 ---FSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWV-AVSPV-ILIDAGGMTTSQFAWTQVPVFGAVIVANAIVAR  276 (413)
T ss_pred             ---CChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HhChH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               01122334455678999987655543332222 2221 22222 2122223  345677777777788888888888


Q ss_pred             hhcCCCChhhHHHHHHHHHHHHHHHHHhc--ccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHH
Q 021469          180 LTTGLPSITFIVSGGAIAQVVVFLWILIN--YSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQ  257 (312)
Q Consensus       180 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~  257 (312)
                      +.++..+++.. ..+..+...+..+....  ..++.    +...++..++.++|.+.......+..-.-.+++..++.++
T Consensus       277 ~~~~~~~~~~~-~~~~~~~~ig~~l~~~~~~~~~~~----~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~~~G~a~a~  351 (413)
T PRK15403        277 FVKDPTEPRFI-WRAVPIQLVGLALLIVGNLLWPHV----WLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLPKGTVSAS  351 (413)
T ss_pred             HhccCCchhHH-HHHHHHHHHHHHHHHHHHHHcccc----HHHHHHHHHHHHHHHHHHhHHHHHHHhccCCCCCcHHHHH
Confidence            77544332222 11111111121111111  11221    1224556666777776665555532211123345678899


Q ss_pred             HHHHHHHHHHHHHHhhhhh
Q 021469          258 LKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       258 ~~~~qs~g~ai~f~~~~~l  276 (312)
                      +++.+..+..++-....++
T Consensus       352 ~~~~~~~~~~~~~~~~g~~  370 (413)
T PRK15403        352 LNMVILMVMAVSVEIGRWL  370 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999988888877776654

>PF13347 MFS_2: MFS/sugar transport protein

Probab=98.88  E-value=1.7e-07  Score=89.75  Aligned_cols=234  Identities=16%  Similarity=0.096  Sum_probs=133.6

Q ss_pred             ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCC-CCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469           26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGST-SGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF  104 (312)
Q Consensus        26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~-~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~  104 (312)
                      ++|.+..+.=......+.++.+.+...+....++.+. +....+..++.++.++..++..+.-+.++++.++     +++
T Consensus       136 ~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~-----~~~  210 (428)
T PF13347_consen  136 DERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTE-----QEK  210 (428)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccccccc-----ccc
Confidence            5677777765555555554444443333322121111 1223445555555555554443332221111111     122


Q ss_pred             hhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhccccccccccccc-chhhHHHHHHhHHHHHHHHHHhhhhcC
Q 021469          105 YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV-SGVGGAMAVYGAFDAICSLAAGRLTTG  183 (312)
Q Consensus       105 ~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~-~~~g~v~~~~g~~~~ig~~~~G~l~d~  183 (312)
                      +.++++.++   .+++||+++.+.-..+...+......+..+ -+....+|. +..+..+....+..+++..+.+++.||
T Consensus       211 ~~~~~~~~~---~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~-y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r  286 (428)
T PF13347_consen  211 KISLRDSLR---SLFRNRPFRILLLAFFLQWLAFALMNTFLP-YYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKR  286 (428)
T ss_pred             ccccccchh---hhcccchHHHHHHHHHHHHhhhhhhhhHHH-HHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334445443   345678777666666665555444433211 011222232 245566667888899999999999999


Q ss_pred             CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC--------hhhhH
Q 021469          184 LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD--------TEGAF  255 (312)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~--------~~~af  255 (312)
                      +++|+ .+..+.++.....++... .+++    ++++.++..++.|++-+..+...++++++.-+++        +...+
T Consensus       287 ~gk~~-~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~  360 (428)
T PF13347_consen  287 FGKKK-VYIIGLLLAALGFLLLFF-LGPG----SPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYF  360 (428)
T ss_pred             cccee-ehhhhHHHHHHHHHHHHH-HHhh----hHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHH
Confidence            98765 555666666555554332 2211    1356889999999999999999999999876522        23568


Q ss_pred             HHHHHHHHHHHHHHHHhhh
Q 021469          256 AQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       256 a~~~~~qs~g~ai~f~~~~  274 (312)
                      +++.+.+-+|.+++-.+..
T Consensus       361 s~~~~~~k~~~~la~~i~g  379 (428)
T PF13347_consen  361 SVNSFFIKIGQGLAGAIVG  379 (428)
T ss_pred             HhhhhhhHHHHHHHHHHHH
Confidence            8888888888888776554

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=98.87  E-value=6.9e-07  Score=95.79  Aligned_cols=238  Identities=17%  Similarity=0.115  Sum_probs=139.4

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF  104 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~  104 (312)
                      ++++++.+|+..+..+++.++|.++...+.....      .+..|.....+.+++.++..+++++...++.. + .    
T Consensus       139 ~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~----  206 (1140)
T PRK06814        139 KDELLGANALVEAGTFIAILLGTIIGGLATISGN------FVILVALLMGIAVLGWLASLFIPKTGNAAPDL-K-I----  206 (1140)
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHHHhccc------cHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCC-e-e----
Confidence            4689999999999999999999999887765321      23445333444444455555665543221111 0 0    


Q ss_pred             hhHHHHHHHHHHH-hhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhh
Q 021469          105 YSYLVSLSKSITT-LLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLT  181 (312)
Q Consensus       105 ~~s~~~~~~~~~~-~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~  181 (312)
                      ..+..++..+.++ +.+++.++.++..+....+..+...+..+. +....+|  ....|+++..++++.++|+++.|++.
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~  285 (1140)
T PRK06814        207 DRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPL-LAKETLGGDENVATLFLAVFSVGVAVGSFLASKLS  285 (1140)
T ss_pred             ccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHH-HHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            0111222333344 466777766655444433332222222221 1122223  34678899999999999999999999


Q ss_pred             cCCCChhhHHHHHHHHHHHHHHHHHhc----ccCCCCC---------CCchHHHHHHHHHHhhhhHHhhhhHhHHHHhcc
Q 021469          182 TGLPSITFIVSGGAIAQVVVFLWILIN----YSVTSGV---------LGTLYPLIMAALLGIGDGVLNTQLSALLGILFK  248 (312)
Q Consensus       182 d~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---------~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~  248 (312)
                      |+..+++.+ ..+.++..+..+.+...    ..+....         ...+...+..+++|++.+..+...++++....|
T Consensus       286 ~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p  364 (1140)
T PRK06814        286 EGRITLLYV-PIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWAN  364 (1140)
T ss_pred             CCceeeeee-hHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCC
Confidence            765433322 22222222111111111    0000000         012445677888999999999999999999887


Q ss_pred             CCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          249 HDT-EGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       249 ~~~-~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ++. .+++++.++...+|.+++-.+...+
T Consensus       365 ~~~~G~v~g~~~~~~~~~~~ig~~~~g~l  393 (1140)
T PRK06814        365 PAHRARVIAANNVLNAAFMVAGTIILALL  393 (1140)
T ss_pred             cccceeeeHHHHHHHHHHHHHHHHHHHHH
Confidence            644 6899999999999888877765543

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=98.86  E-value=5.6e-07  Score=85.10  Aligned_cols=230  Identities=10%  Similarity=0.047  Sum_probs=125.0

Q ss_pred             echhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhhhhHH
Q 021469           29 GSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYL  108 (312)
Q Consensus        29 g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~~~s~  108 (312)
                      ++..|..-...+.+.++|..+...+... +      .+..|.+..++..+..++.++.++++++++++.++.+.++   .
T Consensus       132 ~~~~g~~~~~~~~g~~~g~~~~g~l~~~-~------~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  201 (396)
T TIGR00882       132 NFEYGKARMFGCVGWALCASIAGILFSI-D------PQIVFWLGSGFALILMLLLMFAKPKAPSSATVANALGANA---S  201 (396)
T ss_pred             ccccchhhhhcccHHHHHHHHHhhhhcc-C------chHHHHHHHHHHHHHHHHHHHhCCCCchhhhhhccccccc---C
Confidence            4566666667788888888886554321 1      2345555555555555444443322222111111000000   0


Q ss_pred             HHHHHHHHHhhcChhhHHHHHHHHhhhhHhh---hhhhccccccc-ccccccchhhHHHHHHhHHHHHHHHHHhhhhcCC
Q 021469          109 VSLSKSITTLLADVRMLLIIPLFAYSGLQQA---FVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL  184 (312)
Q Consensus       109 ~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~---f~~~~~~~~~~-s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~  184 (312)
                      +++.++..+.++||+.+.+.+..+.......   .+...|.+.+. +...+.+..|+.....++.++++....|++.||+
T Consensus       202 ~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~  281 (396)
T TIGR00882       202 AFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI  281 (396)
T ss_pred             CCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            1223445677889987555444322211111   11122222221 1122345678888888889999999999999999


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChh-hhHHH-HHHHH
Q 021469          185 PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQ-LKVWQ  262 (312)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~-~afa~-~~~~q  262 (312)
                      ++|+ .+.++.++....+...  .+.++     ++...+..++.|++....+........+..+++.+ ...+. ++...
T Consensus       282 g~~~-~l~~~~~l~~l~~~~~--~~~~~-----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~  353 (396)
T TIGR00882       282 GAKN-ALLIAGTIMSVRIIGS--SFATT-----ALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAK  353 (396)
T ss_pred             ccch-hHHHHHHHHHHHHHHH--HhcCC-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHH
Confidence            8775 4445554444333321  12222     24456678888888777666555566666655442 33444 67788


Q ss_pred             HHHHHHHHHhhhhh
Q 021469          263 CASIAVVFFIGPYI  276 (312)
Q Consensus       263 s~g~ai~f~~~~~l  276 (312)
                      .+|..++..+...+
T Consensus       354 ~lg~~~~~~l~G~l  367 (396)
T TIGR00882       354 QLAMIFLSTLAGNM  367 (396)
T ss_pred             HHHHHHHHHhHHHH
Confidence            88888887766654

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=98.84  E-value=8.2e-07  Score=86.87  Aligned_cols=238  Identities=13%  Similarity=0.037  Sum_probs=137.4

Q ss_pred             cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCcccc--ccchhh-
Q 021469           24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKG--EKETAD-   99 (312)
Q Consensus        24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~--~~~~~~-   99 (312)
                      ++++|++..|++......+..+|..+...+....+      .+..|.+...+.++..++. .++|++++++  +.|... 
T Consensus       125 ~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g------wr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~  198 (495)
T PRK14995        125 EEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY------WGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHA  198 (495)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC------hHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhH
Confidence            35689999999999999999999999877754321      3456666665566555544 4455432211  111000 


Q ss_pred             ----------------cchhhhhH-----------------HHHHHHH-----HHHhhcChhhHHHHHHHHhhhhHh-hh
Q 021469          100 ----------------ASVNFYSY-----------------LVSLSKS-----ITTLLADVRMLLIIPLFAYSGLQQ-AF  140 (312)
Q Consensus       100 ----------------~~~~~~~s-----------------~~~~~~~-----~~~~~~~~~~lll~p~~~~~G~~~-~f  140 (312)
                                      .....+.+                 ..+|.+.     ..+++++|......-..+..++.. ++
T Consensus       199 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~  278 (495)
T PRK14995        199 LMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGF  278 (495)
T ss_pred             HHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHH
Confidence                            00000000                 0111110     135677776544333333222211 11


Q ss_pred             hhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCc
Q 021469          141 VWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGT  218 (312)
Q Consensus       141 ~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (312)
                      . -.++ .+.....|  ..+.|+.+..++++..+++.+.|++.||+++|+ .+..+.++....+.+.. ...++.+   +
T Consensus       279 ~-~~~~-~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~-~~~~g~~~~~~~~~~l~-~~~~~~~---~  351 (495)
T PRK14995        279 E-LLMA-QELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRL-VATGGMALSALSFYGLA-MTDFSTQ---Q  351 (495)
T ss_pred             H-HHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH-HHHHHHHHHHHHHHHHH-HhcCCCc---h
Confidence            1 0111 11111122  346788999999999999999999999998765 44556555544433322 1222211   2


Q ss_pred             hHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhh
Q 021469          219 LYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       219 ~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~  274 (312)
                      +......++.|++.+..+...........|++ ...+.++++..+.+|.+++-.+.+
T Consensus       352 ~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g  408 (495)
T PRK14995        352 WQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFG  408 (495)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence            33456778889999988877777776666644 467889999999999888776554

>TIGR01272 gluP glucose/galactose transporter

Probab=98.84  E-value=4.1e-07  Score=83.73  Aligned_cols=228  Identities=12%  Similarity=0.050  Sum_probs=129.8

Q ss_pred             ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCC-CcC---------CCCchhhHHHHHHHHHHHHHHHHhccCCcccccc
Q 021469           26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK-GGS---------TSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEK   95 (312)
Q Consensus        26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~-~~~---------~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~   95 (312)
                      |+..+..++.-+++..|.++|.++...+..... +..         ....+..|.+..++..+-.+.+.+.+.|+.++++
T Consensus        42 ~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~  121 (310)
T TIGR01272        42 ETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEAD  121 (310)
T ss_pred             chHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCccc
Confidence            568889999999999999999999876653211 100         0112345555544444444455566555533222


Q ss_pred             chhhcchhhhhHHHHHHHHHHHhhcChhh-HHHHHHHHhhhhHhhhhh--hcccccccccccccchhhHHHHHHhHHHHH
Q 021469           96 ETADASVNFYSYLVSLSKSITTLLADVRM-LLIIPLFAYSGLQQAFVW--AEFTKEIVTPALGVSGVGGAMAVYGAFDAI  172 (312)
Q Consensus        96 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~-lll~p~~~~~G~~~~f~~--~~~~~~~~s~~lg~~~~g~v~~~~g~~~~i  172 (312)
                      + ++.+.++.    ++   ..+.+++|+. +..+-+++|.|.|.+...  ..|-+......+..+..+.....+..+.++
T Consensus       122 ~-~~~~~~~~----~~---~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~i  193 (310)
T TIGR01272       122 V-ARVSSGDT----TQ---KTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMV  193 (310)
T ss_pred             c-cccccccc----cc---hhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHH
Confidence            1 11110010    01   1123445554 556778889998887653  122210000012234567778889999999


Q ss_pred             HHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChh
Q 021469          173 CSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE  252 (312)
Q Consensus       173 g~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~  252 (312)
                      |.++.+++.||+++|+.+ .++.++......+ ....+ .      .......++.|++-+.......+...+.++++..
T Consensus       194 Gr~~~~~l~~r~g~~~~l-~~~~~l~~~~~~l-~~~~~-~------~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~  264 (310)
T TIGR01272       194 GRFIGSAVMPMISQGRYL-AFNAFLAVLLSIG-AALTH-G------YVAMWFVLALGLFNSIMFPTIFSLALNALGRHTS  264 (310)
T ss_pred             HHHHHHHHHHHhCHHHHH-HHHHHHHHHHHHH-HHHcC-C------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence            999999999999866533 3444443333222 11221 1      1233455578899888888888888888877665


Q ss_pred             hhHHHHHHHHHHHHHHHHH
Q 021469          253 GAFAQLKVWQCASIAVVFF  271 (312)
Q Consensus       253 ~afa~~~~~qs~g~ai~f~  271 (312)
                      ++.++. ..-.+|.++.-.
T Consensus       265 ~asai~-~~~~~Gg~i~P~  282 (310)
T TIGR01272       265 QGSGIL-CLAIVGGAIVPL  282 (310)
T ss_pred             hhHHHH-HHHHhcchHHHH
Confidence            666664 333344444433

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>TIGR00788 fbt folate/biopterin transporter

Probab=98.84  E-value=1.3e-06  Score=85.05  Aligned_cols=241  Identities=15%  Similarity=0.142  Sum_probs=147.3

Q ss_pred             ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCcccc-ccchhh-----
Q 021469           26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKG-EKETAD-----   99 (312)
Q Consensus        26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~-~~~~~~-----   99 (312)
                      +..+...+..|.....|.++|..++-.+.....      .+..|.+..++..+..+..++++++++.. ++..++     
T Consensus       154 ~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~------~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~  227 (468)
T TIGR00788       154 SAGPSLVSWMWGASATGGLISSLLGGPLLDKTL------TRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNM  227 (468)
T ss_pred             CcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcC------cchHHHHHHHHHHHHHHHHHhcccccccccccccccchhhh
Confidence            445667788999999999999988876654322      23456666666666655556666643111 110000     


Q ss_pred             --cchhhhhHHHHHHHHHHHhhcChhhHH-HHHHHH-hhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHH
Q 021469          100 --ASVNFYSYLVSLSKSITTLLADVRMLL-IIPLFA-YSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAIC  173 (312)
Q Consensus       100 --~~~~~~~s~~~~~~~~~~~~~~~~~ll-l~p~~~-~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig  173 (312)
                        .........++.+++.++.+++|++.. +...++ |... .+.....|.  +-...+|  .+.+|.+....+++++++
T Consensus       228 ~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~-~~~~~~~f~--~~~~~lG~s~~~~G~~~~~~~v~~i~g  304 (468)
T TIGR00788       228 ALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANL-PGASGSVFC--ATTQCLPGGPSFSGMSKVVGNLGSLCG  304 (468)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhc-CCCCceeEE--EEcccCCCCcchhhhHHHHHHHHHHHH
Confidence              000111235666788888889988855 333343 2211 111111111  1111233  457899999999999999


Q ss_pred             HHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHH-h--cccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC
Q 021469          174 SLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL-I--NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD  250 (312)
Q Consensus       174 ~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~  250 (312)
                      ..+.+++.+|++.|+ ++.++.++...+..... .  .|.......+.++.....++-+++.+...+....++.+.-|++
T Consensus       305 ~~~~~~~~~~~~~r~-~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~  383 (468)
T TIGR00788       305 VGGYDRFLKTFPYRL-LFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSG  383 (468)
T ss_pred             HHHHHHHHhhCCHHH-HHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCC
Confidence            999999999888554 55566666554432211 1  1211100011234556677888888888888888888888765


Q ss_pred             h-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          251 T-EGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       251 ~-~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      . ...++++..++++|..++-.++..+
T Consensus       384 ~egt~~al~~s~~~lg~~v~~~~gg~l  410 (468)
T TIGR00788       384 CESSVFALLASILHLGSSVSGFLGVLL  410 (468)
T ss_pred             ceehHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5 4789999999999999999877754

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=98.83  E-value=9.9e-07  Score=84.62  Aligned_cols=103  Identities=11%  Similarity=-0.018  Sum_probs=53.4

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      +..+.......+..++++.+.|++.||++||+.+...+.+..+............+.    +...+.+..+.+++-+...
T Consensus       279 ~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  354 (432)
T PRK10406        279 NVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSS----PYAAFGLVMCALLIVSFYT  354 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCc----HHHHHHHHHHHHHHHHHHH
Confidence            355666667777788889999999999987764432222221111111111111111    1112222221222223333


Q ss_pred             hhhHhHHHHhccCC-hhhhHHHHHHHHH
Q 021469          237 TQLSALLGILFKHD-TEGAFAQLKVWQC  263 (312)
Q Consensus       237 t~~~~i~g~~~~~~-~~~afa~~~~~qs  263 (312)
                      ...+.+..+.+|.+ +..+.++.+...+
T Consensus       355 ~~~~~~~~e~fp~~~r~t~~g~~~~~g~  382 (432)
T PRK10406        355 SISGILKAEMFPAQVRALGVGLSYAVAN  382 (432)
T ss_pred             HHHHHHHHHHCCCCccchhhhHHHHHHH
Confidence            44566778899864 4667777665544

>PRK10054 putative transporter; Provisional

Probab=98.82  E-value=6.6e-07  Score=84.97  Aligned_cols=225  Identities=13%  Similarity=0.104  Sum_probs=128.3

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcchh
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVN  103 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~~  103 (312)
                      ++++++..|+.....+++.++|..+...+... +      .+..|.+..++..++.++. +++|+++++++++       
T Consensus       127 ~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~-g------~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~-------  192 (395)
T PRK10054        127 STSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQ-S------INLPFWLAAICSAFPLVFIQIWVQRSEKAIATE-------  192 (395)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c------cCcHHHHHHHHHHHHHHHHHHHHhccccccccc-------
Confidence            46799999999999999999999887766532 1      1234555555555654443 4454432221111       


Q ss_pred             hhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhh-h--hhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhh
Q 021469          104 FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQA-F--VWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRL  180 (312)
Q Consensus       104 ~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~-f--~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l  180 (312)
                      +++.     ++..+.++||+.+.+....+...+..+ +  +...|.........+...++.+...+++..+......|++
T Consensus       193 ~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~  267 (395)
T PRK10054        193 TGSV-----WSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRR  267 (395)
T ss_pred             hhhh-----hhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHH
Confidence            0000     112356788887665544332222111 1  1112211111111223456777888888888888899999


Q ss_pred             hcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHH
Q 021469          181 TTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLK  259 (312)
Q Consensus       181 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~  259 (312)
                      .||+++|+ .+..+.++....+.... ...++     .+...+..+++|+++.......+..+.+..|++. .++++...
T Consensus       268 ~~~~~~~~-~l~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~  340 (395)
T PRK10054        268 LNAANIRP-LMTAGTLCFVIGLVGFI-FSGNS-----LLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS  340 (395)
T ss_pred             HccCCchh-HHHHHHHHHHHHHHHHH-HcchH-----HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH
Confidence            99987665 44455544444433221 11111     2234567889999998877777778888777544 46777544


Q ss_pred             HHHHHHHHHHHHhhhhh
Q 021469          260 VWQCASIAVVFFIGPYI  276 (312)
Q Consensus       260 ~~qs~g~ai~f~~~~~l  276 (312)
                       ...+|.+++-.....+
T Consensus       341 -~~~~G~~~Gp~~~G~l  356 (395)
T PRK10054        341 -LGWLGAAINPLVSGVI  356 (395)
T ss_pred             -HHHHHHHHHHHHHHHH
Confidence             3446677776666654

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=98.82  E-value=1.6e-06  Score=82.38  Aligned_cols=224  Identities=12%  Similarity=0.042  Sum_probs=125.1

Q ss_pred             cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcch
Q 021469           24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASV  102 (312)
Q Consensus        24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~  102 (312)
                      +++++++..|+.-...+.+..+|..+...+... +      .+..|.+..++.++..++. .++|+++ ++++       
T Consensus       129 ~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~-g------~~~~f~~~~~~~~~~~i~~~~~~~~~~-~~~~-------  193 (400)
T PRK11646        129 RPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQY-D------FRLVCATGAVLFVLAAAFNAWLLPAYK-LSTV-------  193 (400)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-h------HHHHHHHHHHHHHHHHHHHHHhCCccc-cccc-------
Confidence            357899999999999999999999888666521 1      2344544444444444333 3444321 1110       


Q ss_pred             hhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhccccccccccc-ccchhhHHHHHHhHHHHHHHHHHhhhh
Q 021469          103 NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPAL-GVSGVGGAMAVYGAFDAICSLAAGRLT  181 (312)
Q Consensus       103 ~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~l-g~~~~g~v~~~~g~~~~ig~~~~G~l~  181 (312)
                        .++.++..   .+.++||+.+.+.-.+.-............| .+..+.. ....+|......++....+....+++.
T Consensus       194 --~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~  267 (400)
T PRK11646        194 --RTPVREGM---TRVLRDKRFVTYVLTLTGYYMLAVQVMLMLP-IMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWS  267 (400)
T ss_pred             --chhhHHHH---HHHHcCchHHHHHHHHHHHHHHHHHHHHhhh-hhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              01112222   2456788765433222111111100111111 1111111 224567777777777776666667777


Q ss_pred             cC-CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccC-ChhhhHHHHH
Q 021469          182 TG-LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH-DTEGAFAQLK  259 (312)
Q Consensus       182 d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~-~~~~afa~~~  259 (312)
                      || ++.++ .+..+.++........  .+.++     .+...+..+++|.+.+........++.+..|+ +..++++.++
T Consensus       268 ~~r~~~~~-~~~~~~~~~~~~~~~l--~~~~~-----~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~  339 (400)
T PRK11646        268 EKRFRLEH-RLMAGLLIMSLSMFPI--GMVSN-----LQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSR  339 (400)
T ss_pred             HHhcchhH-HHHHHHHHHHHHHHHH--HHhhh-----HHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHH
Confidence            64 44333 3344444443333222  12222     12344556778888888888888888888875 4468999999


Q ss_pred             HHHHHHHHHHHHhhhhh
Q 021469          260 VWQCASIAVVFFIGPYI  276 (312)
Q Consensus       260 ~~qs~g~ai~f~~~~~l  276 (312)
                      ...++|..++-.+.+.+
T Consensus       340 ~~~~~g~~ig~~l~G~l  356 (400)
T PRK11646        340 LGLALGGAIGYIGGGWL  356 (400)
T ss_pred             HHHHHHHHhcccchHHH
Confidence            99999999998877764

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=98.82  E-value=1e-06  Score=86.04  Aligned_cols=103  Identities=12%  Similarity=-0.012  Sum_probs=56.3

Q ss_pred             hhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHH-HHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhh
Q 021469          159 VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIA-QVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT  237 (312)
Q Consensus       159 ~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t  237 (312)
                      .+.......++..++..+.|++.||++||+ .+..+.+. ...+.........++     ....++..++.|++-+....
T Consensus       288 ~~~~~~~~~~~~~~~~~~~g~l~dr~grr~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~g  361 (490)
T PRK10642        288 GVLIIIAIMIGMLFVQPVMGLLSDRFGRRP-FVILGSVALFVLAIPAFILINSNV-----IGLIFAGLLMLAVILNCFTG  361 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHHHHHHHHHHHHH
Confidence            455556677888899999999999999876 43344332 222221111111111     12233344555555555555


Q ss_pred             hhHhHHHHhccCCh-hhhHHH-HHHHHHHHHH
Q 021469          238 QLSALLGILFKHDT-EGAFAQ-LKVWQCASIA  267 (312)
Q Consensus       238 ~~~~i~g~~~~~~~-~~afa~-~~~~qs~g~a  267 (312)
                      ....++...+|.+. ..+.+. +++....|..
T Consensus       362 ~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~  393 (490)
T PRK10642        362 VMASTLPAMFPTHIRYSALAAAFNISVLVAGL  393 (490)
T ss_pred             HHHHHHHHHCCCccchHHHHHHHHHHHHHHHH
Confidence            56667777888654 445664 4554444433

>PRK09669 putative symporter YagG; Provisional

Probab=98.80  E-value=9e-07  Score=85.23  Aligned_cols=232  Identities=9%  Similarity=-0.051  Sum_probs=124.8

Q ss_pred             ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcC-CCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469           26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGS-TSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF  104 (312)
Q Consensus        26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~-~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~  104 (312)
                      ++|++..+..+...+.+..+++++...+.....+.+ .......+.++.++..+..++.++.. +|+.++++      ++
T Consensus       142 ~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~-~e~~~~~~------~~  214 (444)
T PRK09669        142 RERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMT-KERYTPEV------DN  214 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCe-EEecCCCC------cC
Confidence            568888898888888888888866533322111101 11112344445554444443333321 22211111      01


Q ss_pred             hhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccccc-hhhHHHHHHhHHHHHHHHHHhhhhcC
Q 021469          105 YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVS-GVGGAMAVYGAFDAICSLAAGRLTTG  183 (312)
Q Consensus       105 ~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~-~~g~v~~~~g~~~~ig~~~~G~l~d~  183 (312)
                      +.+.++++   ..+++||+.+.+.-..+..........+... -+....++.. ..+.++....+..+++..+.+++.||
T Consensus       215 ~~~~~~~~---~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r  290 (444)
T PRK09669        215 SSSVWKDL---KLLLGNSQWRIMFIFNVVLLTAVVTRGGATL-YYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGK  290 (444)
T ss_pred             CCCHHHHH---HHHhCCchHHHHHHHHHHHHHHHHHHhhhhh-eeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            12233433   3457888876665554443333333222110 0111122222 23344445567778888899999999


Q ss_pred             CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh--------hhhH
Q 021469          184 LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT--------EGAF  255 (312)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~--------~~af  255 (312)
                      +++|+ .+..+.+....+....+ ..++++    .+..++..+++|++.+..+....+++++..+.++        ...+
T Consensus       291 ~gk~~-~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~  364 (444)
T PRK09669        291 FDRVR-AFKWTIVAFVILSALIF-FIPPSN----VWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVF  364 (444)
T ss_pred             hChHH-HHHHHHHHHHHHHHHHH-HhCcch----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHH
Confidence            98765 33344433332222222 222221    2346677789999999999999999988764211        2458


Q ss_pred             HHHHHHHHHHHHHHHHhhh
Q 021469          256 AQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       256 a~~~~~qs~g~ai~f~~~~  274 (312)
                      +.+.+.+.+|.+++-.+..
T Consensus       365 s~~~~~~klg~alg~~i~g  383 (444)
T PRK09669        365 STNLFAIKLGLAIGGAVVG  383 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            8888888888887765544

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=98.80  E-value=1.4e-06  Score=83.70  Aligned_cols=259  Identities=10%  Similarity=0.009  Sum_probs=123.3

Q ss_pred             cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHH-HHhccCCcccc-----c---
Q 021469           24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKG-----E---   94 (312)
Q Consensus        24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l-~lfL~~~~~~~-----~---   94 (312)
                      ++++||+..|+.....+.+..+|+.+........     ...+..|.+..++.++..++ .+++|+++++.     +   
T Consensus       148 ~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~-----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  222 (438)
T TIGR00712       148 SQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF-----NDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYR  222 (438)
T ss_pred             CcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh-----hhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcc
Confidence            3567999999999999999988887654332211     11244566655555554433 44555432210     0   


Q ss_pred             cch-hh--cchhhhhHHHHHHHHHHHhhcChhhHHHHHHHHh-hhhHhhhhhhcccccccccccc--cchhhHHHHHHhH
Q 021469           95 KET-AD--ASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAY-SGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGA  168 (312)
Q Consensus        95 ~~~-~~--~~~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~-~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~  168 (312)
                      +|. ++  .+.+++.+.++.+++  +.++|+++..+...... .....++. . +...+..+..|  ....+..+..+++
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~p~~l~~~~g~s~~~~~~~~~~~~~  298 (438)
T TIGR00712       223 NDYPDDYNEKAEQELTAKEIFMQ--YVLPNKLLWYIAIANVFVYLLRYGVL-D-WSPTYLKEVKHFALDKSSWAYFLYEY  298 (438)
T ss_pred             cccccccccccccccchHHHHHH--HHccCchHHHHHHHHHHHHHHHHHHH-H-hHHHHHHHccCCChhhHHHHHHHHHH
Confidence            000 00  000011112222211  36788877555333222 11111111 1 11112122223  2456777788999


Q ss_pred             HHHHHHHHHhhhhcCCCC-hhhHHHHHHHHHH--HHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHH
Q 021469          169 FDAICSLAAGRLTTGLPS-ITFIVSGGAIAQV--VVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGI  245 (312)
Q Consensus       169 ~~~ig~~~~G~l~d~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~  245 (312)
                      ..+++.++.|++.||+++ |+...  +.....  ....+.+... +..+   ++...+..+.+|++-............+
T Consensus       299 ~~~ig~~~~g~l~dr~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~  372 (438)
T TIGR00712       299 AGIPGTLLCGWMSDKVFKGNRGAT--GVFFMTLVTIAVIVYWMN-PAGN---PLVDMICMIVIGFLIYGPVMLIGLHALE  372 (438)
T ss_pred             HHHHHHHHHHHHHHHhccCcccHH--HHHHHHHHHHHHHHHHhc-CCCc---hHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence            999999999999999843 22221  211111  1111111111 1111   1222333344454332222333345667


Q ss_pred             hccCC-hhhhHHHHHHHHHHH-HHHHHHhhhhh----hHHHHHHHHHHHHHHHHHHHH
Q 021469          246 LFKHD-TEGAFAQLKVWQCAS-IAVVFFIGPYI----SLQAMLIVMVVGICVALVGIL  297 (312)
Q Consensus       246 ~~~~~-~~~afa~~~~~qs~g-~ai~f~~~~~l----~~~~~~~il~~~~~~~~~~~~  297 (312)
                      .+|++ +..+.++.+....+| .+++-.+.+.+    ....-++++.+..+++.+...
T Consensus       373 ~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~  430 (438)
T TIGR00712       373 LAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI  430 (438)
T ss_pred             hcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence            77754 457888888776665 34554443332    223334444555555555433

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=98.80  E-value=2.5e-07  Score=85.66  Aligned_cols=239  Identities=13%  Similarity=0.021  Sum_probs=121.4

Q ss_pred             CceeechhhHHHHHHHHhHhhhh-HHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccc--c-c---
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGN-LITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGE--K-E---   96 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~-li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~--~-~---   96 (312)
                      +++|++..|+.....+.+.++|. ++...+....+      .+..|.+..++.++..++. +++++++++++  + +   
T Consensus       114 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (379)
T TIGR00881       114 RSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYS------WHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMP  187 (379)
T ss_pred             HhhheeeEeehhccchhHHHHHHHHHHHHHHhcCC------chhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCc
Confidence            46789999999999999999998 45544432211      2344555555555444443 34443222110  0 0   


Q ss_pred             --hhhcc---hhhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHH
Q 021469           97 --TADAS---VNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAF  169 (312)
Q Consensus        97 --~~~~~---~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~  169 (312)
                        +.+.+   .++..+.++  ....+++++|+...+....+.............+ .+..+..|  ....++....++++
T Consensus       188 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~  264 (379)
T TIGR00881       188 NEEPDGDAEKKEEELTKKQ--IFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSP-LYLTQEKGFSKEKASWAFTLYELG  264 (379)
T ss_pred             ccccccccccccccccchH--HHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHH
Confidence              00000   000001111  1123456777765443322222111111111111 11112223  34578888889999


Q ss_pred             HHHHHHHHhhhhcCC-CChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhcc
Q 021469          170 DAICSLAAGRLTTGL-PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFK  248 (312)
Q Consensus       170 ~~ig~~~~G~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~  248 (312)
                      .+++.++.|++.||. ++|+.................+ ...+..+   +....+..++.|+.-.........+..+..|
T Consensus       265 ~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  340 (379)
T TIGR00881       265 GLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVY-WLNPAAN---PLMDLICLFALGFLVYGPQMLIGVIASELAP  340 (379)
T ss_pred             cchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH-hcCcchh---HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcC
Confidence            999999999999975 3332222111111111111111 1111111   2234555666776555555556667778787


Q ss_pred             CC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          249 HD-TEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       249 ~~-~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ++ +..+.+++.....+|..++-.+.+.+
T Consensus       341 ~~~~g~~~g~~~~~~~~g~~~~~~~~g~l  369 (379)
T TIGR00881       341 KKAAGTAAGFVGFFAYLGGILAGLPLGYL  369 (379)
T ss_pred             cchhHHHHHHHHHhhhhhhhhhhhhHHHH
Confidence            54 46789999999999988777665543

>PRK10429 melibiose:sodium symporter; Provisional

Probab=98.77  E-value=1.7e-06  Score=84.23  Aligned_cols=159  Identities=13%  Similarity=0.077  Sum_probs=93.7

Q ss_pred             HHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhccccccccccccc-chhhHHHHHHhHHHHHHHHHHhhhhcCCC
Q 021469          107 YLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV-SGVGGAMAVYGAFDAICSLAAGRLTTGLP  185 (312)
Q Consensus       107 s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~-~~~g~v~~~~g~~~~ig~~~~G~l~d~~~  185 (312)
                      ++++.++.   +++||.++.++-..+..........+..+ -+....++. +..+.++...+++++++..+.+++.||++
T Consensus       219 ~~~~~~~~---~~~n~~~~~ll~~~~~~~~~~~~~~~~~~-y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g  294 (473)
T PRK10429        219 TLKDIVAL---IYKNDQLSCLLGMALAYNIASNIINGFAI-YYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLS  294 (473)
T ss_pred             CHHHHHHH---HhcCHHHHHHHHHHHHHHHHHHHHhhhee-eEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            44444432   45787776655544433333333322211 111111232 23556666677889999999999999998


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHhc--ccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-------h-hhhH
Q 021469          186 SITFIVSGGAIAQVVVFLWILIN--YSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-------T-EGAF  255 (312)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-------~-~~af  255 (312)
                      +|+ .+.++.++.+.+.+..+..  .+++    ++++..+..++.|++.+..+....+++.+.-+.+       . ...+
T Consensus       295 kk~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~  369 (473)
T PRK10429        295 RRI-LWAGASIFPVLSCGVLLLMGLAAPH----NALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAY  369 (473)
T ss_pred             cHH-HHHHHHHHHHHHHHHHHHHhccCch----hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHH
Confidence            775 4444444433332222211  1222    1234566778899999999998888888874321       1 2478


Q ss_pred             HHHHHHHHHHHHHHHHhhh
Q 021469          256 AQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       256 a~~~~~qs~g~ai~f~~~~  274 (312)
                      +...+.+-+|.+++-.+.+
T Consensus       370 s~~~~~~K~~~al~~~i~g  388 (473)
T PRK10429        370 SVQTMVVKGGSAFAAFFIG  388 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            8888888888888766544

>PRK15011 sugar efflux transporter B; Provisional

Probab=98.77  E-value=6e-06  Score=78.15  Aligned_cols=112  Identities=14%  Similarity=0.039  Sum_probs=67.9

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ...|.......++.+++.++.|++.||+++|+ .+..+.+.....+...  ...++     ++...+..++.+++-+...
T Consensus       252 ~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~l~~~~l~~~~~g~~~  323 (393)
T PRK15011        252 KLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRF-LMRVAAVAGVCFYAGM--LMAHS-----PAILLGLQLLNAIYIGILG  323 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH-HHHHHHHHHHHHHHHH--HHHhh-----HHHHHHHHHHHHHHHHHHH
Confidence            35666666666778889999999999998765 4334433333222221  12222     1222222333333333333


Q ss_pred             hhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          237 TQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       237 t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ........+.+|++...+.+.+....++|.+++-.+.+.+
T Consensus       324 ~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i  363 (393)
T PRK15011        324 GIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIV  363 (393)
T ss_pred             HHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3334455677887777889998888899999998888765

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=98.77  E-value=5.1e-07  Score=87.91  Aligned_cols=262  Identities=12%  Similarity=0.052  Sum_probs=123.0

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhc---CCCCcCCCCchhhHHHHHHHHHHHHHHHHhccC--Cccccccchhh
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLK---DDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK--EEDKGEKETAD   99 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~---~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~--~~~~~~~~~~~   99 (312)
                      ++.||+..|+.....+.+..+|+.+...+..   .....+....+..|.+..++.++..++..++++  |+.+.++..++
T Consensus       154 ~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~~~~~~  233 (476)
T PLN00028        154 GKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYRELKKS  233 (476)
T ss_pred             hhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchhhHHhc
Confidence            4689999999998888888888766643321   110000112456677776666665555555542  22111110000


Q ss_pred             cchhhhhHHHHHHHHHHHhhcChhhHHHHHHHH-hhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHH
Q 021469          100 ASVNFYSYLVSLSKSITTLLADVRMLLIIPLFA-YSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLA  176 (312)
Q Consensus       100 ~~~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~-~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~  176 (312)
                      . ..++.+..+   ...+.+++++..++...++ ..+....+. +..+.-+ ....|  .+..+.+...++++.+++.++
T Consensus       234 ~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~l-~~~~g~s~~~a~~~~~~~~~~~~ig~~~  307 (476)
T PLN00028        234 G-TMPKDSFSK---VLRYGVTNYRTWILALTYGYSFGVELTMD-NIIAEYF-YDRFGLSLETAGAIAASFGLMNLFARPA  307 (476)
T ss_pred             C-ccccccHHH---HHHHHHcCchhHHHHHHHHHHHHHHHHHH-hHHHHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHhh
Confidence            0 001111222   2234577888654443322 222222211 1111111 11123  345678888899999999999


Q ss_pred             HhhhhcCCCCh------hhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC
Q 021469          177 AGRLTTGLPSI------TFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD  250 (312)
Q Consensus       177 ~G~l~d~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~  250 (312)
                      .|++.||++||      ..+..+..++..... + ...+.++     .+...+..++++++-+..+...+.+.....|++
T Consensus       308 ~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~-~-~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  380 (476)
T PLN00028        308 GGYLSDVAARRFGMRGRLWALWIVQTLGGVFC-I-WLGRANS-----LGAAIVVMILFSIFVQAACGATFGIVPFVSRRS  380 (476)
T ss_pred             hHHHHHHHHHhcCcchhHHHHHHHHHHHHHHH-H-Hhcccch-----HHHHHHHHHHHHHHHHHhhhhhcccCcccChhh
Confidence            99999987643      112212222211111 1 1112111     122222333344433333333344444445554


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHhhhh---hhHHHHHHHHHHHHHHHHHHHHHh
Q 021469          251 TEGAFAQLKVWQCASIAVVFFIGPY---ISLQAMLIVMVVGICVALVGILFL  299 (312)
Q Consensus       251 ~~~afa~~~~~qs~g~ai~f~~~~~---l~~~~~~~il~~~~~~~~~~~~~~  299 (312)
                      ...+.++......+|..++=.+-..   .+...-+++..++.+++.+..+++
T Consensus       381 ~g~~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~~f~~~~~~~~i~~~~~~~~  432 (476)
T PLN00028        381 LGVISGLTGAGGNVGAVLTQLLFFTGSSYSTETGISLMGVMIIACTLPVAFI  432 (476)
T ss_pred             chhhhhhhhccccHHHHHHHHHHHhcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence            5566777666555555443222110   112233444445666676666665

>PRK15075 citrate-proton symporter; Provisional

Probab=98.76  E-value=1.7e-06  Score=82.99  Aligned_cols=97  Identities=10%  Similarity=0.067  Sum_probs=54.4

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHH-HHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVV-VFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      ...++...+++++.++++.+.|++.||++||+..+ .+..+... .+.... ...++++   .....+..++.|++.+..
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~-~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~g~~  348 (434)
T PRK15075        274 ADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLI-AFTVLAILTAYPALS-WLVAAPS---FARMLAVELWLSFLYGSY  348 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHHHHHHH-HHHcCCc---hHHHHHHHHHHHHHHHHH
Confidence            34577777889999999999999999998776443 33222221 111111 1111111   111222233445555566


Q ss_pred             hhhhHhHHHHhccCCh-hhhHHHH
Q 021469          236 NTQLSALLGILFKHDT-EGAFAQL  258 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~~-~~afa~~  258 (312)
                      +...+..+.+.+|++. ..++++.
T Consensus       349 ~~~~~~~~~e~~p~~~rg~~~g~~  372 (434)
T PRK15075        349 NGAMVVALTEVMPAEVRTAGFSLA  372 (434)
T ss_pred             HhhHHHHHHHHCCCCccchheeHH
Confidence            6655667778887543 4566653

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=98.76  E-value=7.2e-07  Score=85.18  Aligned_cols=244  Identities=11%  Similarity=-0.035  Sum_probs=117.8

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHH-HHhccCCccccc---cchhh-
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGE---KETAD-   99 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l-~lfL~~~~~~~~---~~~~~-   99 (312)
                      +++|++..|++......+.++|..++..+.......+....+..|.+..+..++..++ .+++|+++.+.+   +++++ 
T Consensus       127 ~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~  206 (412)
T TIGR02332       127 AYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKA  206 (412)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHH
Confidence            3579999999999999999999988876653211001112456777766665554443 355655332111   00000 


Q ss_pred             c-----------chhhhh--HHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHH
Q 021469          100 A-----------SVNFYS--YLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMA  164 (312)
Q Consensus       100 ~-----------~~~~~~--s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~  164 (312)
                      .           ++++..  .....-++.++.+++|+.++....++.......-...-.|.-+.+...|  ....+....
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~  286 (412)
T TIGR02332       207 LKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAA  286 (412)
T ss_pred             HHHHHHhccccccccccccccccccHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhh
Confidence            0           000000  0001112344545566654444332222111111112122222110112  234566777


Q ss_pred             HHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHH
Q 021469          165 VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLG  244 (312)
Q Consensus       165 ~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g  244 (312)
                      ..+++.++|.++.|++.||+++|+.......++....+.+..  ..++     +........+.+++...-.........
T Consensus       287 ~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~  359 (412)
T TIGR02332       287 IPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLAS--ATDH-----NLIQLLGIIMASMGSFSAMAIFWTTPD  359 (412)
T ss_pred             HHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHH--hcCC-----HHHHHHHHHHHHHHhhhhhhHHHhhcc
Confidence            889999999999999999998665333333333333332211  1111     111211112222222221112222223


Q ss_pred             HhccC-ChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          245 ILFKH-DTEGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       245 ~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      +.+|. +...++++.+....+|.+++-.+-+.
T Consensus       360 ~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~  391 (412)
T TIGR02332       360 QSISLQARAIAIAVINATGNIGSALSPFLIGI  391 (412)
T ss_pred             cccchHHHHHHHHHHHHhhhhhhhhhhhhccc
Confidence            34543 34568999999999888887655443

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>TIGR00896 CynX cyanate transporter

Probab=98.75  E-value=8.9e-07  Score=82.36  Aligned_cols=221  Identities=13%  Similarity=0.098  Sum_probs=110.9

Q ss_pred             ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhhh
Q 021469           26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFY  105 (312)
Q Consensus        26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~~  105 (312)
                      +++++..|+.......+..+|..+...+.....    ...+..|.++.++..+..  ..++|+.+++++++++    +++
T Consensus       118 ~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~----~~w~~~f~~~~~~~~~~~--~~~~~~~~~~~~~~~~----~~~  187 (355)
T TIGR00896       118 QRVGLMTGLYSMALMGGAALAAAATVPLAQHSG----GHWQQALAWWALPALLAL--LAWIPQVRRRVAANQT----TTR  187 (355)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHH--HHHhhhhccccCCCCC----CCC
Confidence            468999999998888888888877655532211    112344544444333332  2233322111111100    000


Q ss_pred             hHHHHHHHHHHHhhcChhhHHHHHHH-HhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCC
Q 021469          106 SYLVSLSKSITTLLADVRMLLIIPLF-AYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL  184 (312)
Q Consensus       106 ~s~~~~~~~~~~~~~~~~~lll~p~~-~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~  184 (312)
                             +...+.++||+...+...+ +......++. +..+.-+.+.-...++.+.....++++.++++++.|++.||+
T Consensus       188 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~  259 (355)
T TIGR00896       188 -------LTPVRIWRSPLAWQVTVFFGLQSGLYYSLI-GWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRV  259 (355)
T ss_pred             -------CCCchhhcCHhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhh
Confidence                   1122456777765433222 2112211111 111111111112235678888999999999999999999999


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh--hhhHHHHHHHH
Q 021469          185 PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT--EGAFAQLKVWQ  262 (312)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~--~~afa~~~~~q  262 (312)
                      ++|+.....+.++...+.....  +.++.     . .....+++|++.+.......+.+....++++  ..++++.....
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~-~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  331 (355)
T TIGR00896       260 KDQRGIVAVLAVLQLVGLCGLL--FAPMH-----G-LWAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIG  331 (355)
T ss_pred             ccchHHHHHHHHHHHHHHHHHH--Hhhhh-----H-HHHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence            5443344444444433333221  22221     1 1224567888888877766666666554432  23455544444


Q ss_pred             HHHHHHHHHh
Q 021469          263 CASIAVVFFI  272 (312)
Q Consensus       263 s~g~ai~f~~  272 (312)
                      .+|.+++-.+
T Consensus       332 ~~~~~~gp~~  341 (355)
T TIGR00896       332 YLLAALGPLF  341 (355)
T ss_pred             HHHHHHHHHH
Confidence            4444444333

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=98.74  E-value=3.5e-07  Score=85.00  Aligned_cols=236  Identities=11%  Similarity=0.041  Sum_probs=113.2

Q ss_pred             cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCC----CCcCCCCchhhH-HHHHHHHHHH-HHHHHhccC-Cccccccc
Q 021469           24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD----KGGSTSGTTLLF-IVFLGVITLG-TILMCFLRK-EEDKGEKE   96 (312)
Q Consensus        24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~----~~~~~~~~~~~~-~if~~i~~~g-~~l~lfL~~-~~~~~~~~   96 (312)
                      ++++|++..++.....+.+..+|..+...+....    ++......+..| .+..++..+. .+...+.++ |+++++++
T Consensus       120 ~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (366)
T TIGR00886       120 PKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATG  199 (366)
T ss_pred             CHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccch
Confidence            3467899999998888888888887765443210    000001122233 4333333332 333333333 22211111


Q ss_pred             hhhcchhhhhHHHHHHHHHHHhhcChhhHHHHH-HHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHH
Q 021469           97 TADASVNFYSYLVSLSKSITTLLADVRMLLIIP-LFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAIC  173 (312)
Q Consensus        97 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~lll~p-~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig  173 (312)
                      +.+.+..+...-++..++..+.+++|+.+.+.- .+.+.+.+.++. +..+. +..+..|  ....+....++++..+++
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~  277 (366)
T TIGR00886       200 KLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVS-SIFAM-FFKDQFGLSKVTAGAYASLGGLLGSLA  277 (366)
T ss_pred             hcccccccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHH-HHHHH-HHHHHcCCcHHHHHHHHHHHHHHHHHH
Confidence            100000000011122335566788888654433 333333332222 11111 2122223  345677788889999999


Q ss_pred             HHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhh
Q 021469          174 SLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEG  253 (312)
Q Consensus       174 ~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~  253 (312)
                      ..+.|++.||+++|+.. ..+.+....+..+......++.+   .+..++...+.++.-+..+...+.+.....|++..+
T Consensus       278 ~~~~g~l~~r~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~  353 (366)
T TIGR00886       278 RPLGGAISDRLGGARKL-LMSFLGVAMGAFLVVLGLVSPLS---LAVFIVLFVALFFFSGAGNGSTFALVPHIFRRATGA  353 (366)
T ss_pred             hhccchHHHhhccchhH-HHHHHHHHHHHHHHHhcCCCcch---HHHHHHHHHHHHHHhccccchhhhcchhhchhhccc
Confidence            99999999999876433 23333332222222212221101   222222233333333333344556667777766667


Q ss_pred             hHHHHHHHHHHH
Q 021469          254 AFAQLKVWQCAS  265 (312)
Q Consensus       254 afa~~~~~qs~g  265 (312)
                      +.++.....++|
T Consensus       354 ~~g~~~~~~~~g  365 (366)
T TIGR00886       354 VSGLVGAIGNLG  365 (366)
T ss_pred             HHHHHHHhccCC
Confidence            888877766554

>PRK03893 putative sialic acid transporter; Provisional

Probab=98.74  E-value=1.3e-06  Score=84.97  Aligned_cols=115  Identities=11%  Similarity=0.053  Sum_probs=73.4

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      ....+.++..++++.++++.+.|++.||+++|+ .+.++.++.....++.. ....+ +   .+...++.++.++.....
T Consensus       310 ~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~-~~~~~~~~~~~~~~~~~-~~~~~-~---~~~~~~~~~~~~~~~~~~  383 (496)
T PRK03893        310 PHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRK-AYVCSLLISQLLIIPVF-AIGGA-N---VWVLGLLLFFQQMLGQGI  383 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH-HHHHHHHHHHHHHHHHh-hcccc-H---HHHHHHHHHHHHHHhccc
Confidence            356788899999999999999999999998765 33344333332222221 11111 0   122333344444433334


Q ss_pred             hhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          236 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ....+.++.+.+|++ ...+++++.....+|..++-.+.+.+
T Consensus       384 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l  425 (496)
T PRK03893        384 SGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALI  425 (496)
T ss_pred             chhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHH
Confidence            556677888888754 46789999999999988887776654

>PRK10504 putative transporter; Provisional

Probab=98.69  E-value=4.7e-06  Score=80.63  Aligned_cols=239  Identities=10%  Similarity=-0.037  Sum_probs=134.4

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhc-cCCccc-cccchh----
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFL-RKEEDK-GEKETA----   98 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL-~~~~~~-~~~~~~----   98 (312)
                      ++++++..|+.....+.+..+|..+...+....      ..+..|.+...+..++.++.... |+.+.+ .|.|..    
T Consensus       129 ~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~------gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~  202 (471)
T PRK10504        129 REQYMAAMTFVTLPGQVGPLLGPALGGLLVEYA------SWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLL  202 (471)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc------cHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHH
Confidence            457788999988888899999888876654321      12445555555555555544333 322211 121210    


Q ss_pred             ------------hcchh-hhhH-----------------HHHH-----HHHHHHhhcChhhHHHHHHHHhhhhHhhhhhh
Q 021469           99 ------------DASVN-FYSY-----------------LVSL-----SKSITTLLADVRMLLIIPLFAYSGLQQAFVWA  143 (312)
Q Consensus        99 ------------~~~~~-~~~s-----------------~~~~-----~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~  143 (312)
                                  +..+. ....                 ..+|     -+-..++++||+.+......+..++..+-...
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~  282 (471)
T PRK10504        203 LAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPF  282 (471)
T ss_pred             HHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHH
Confidence                        00000 0000                 0000     01124578888887766655544433222111


Q ss_pred             cccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHH
Q 021469          144 EFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYP  221 (312)
Q Consensus       144 ~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (312)
                      ..+ .+.....|  ....++.+..+.++..++..+.|++.||+++|+ ++..+..+......+.. ..++..   +.+..
T Consensus       283 ~~~-~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~-~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~  356 (471)
T PRK10504        283 MTP-VFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRR-VLVATTLGLALVSLLFM-LVALLG---WYYLL  356 (471)
T ss_pred             HHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH-HHHHHHHHHHHHHHHHH-hccccc---cHHHH
Confidence            111 11111112  235677888888889999999999999998765 44445444433322221 121111   11223


Q ss_pred             HHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          222 LIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       222 ~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      .+..++.|++.+........+..+..|++. ..+++++.+.+.+|.+++-.+.+.
T Consensus       357 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~  411 (471)
T PRK10504        357 PFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGL  411 (471)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence            345667778887777777778878887654 478999999999999888777664

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=98.66  E-value=1e-05  Score=78.81  Aligned_cols=117  Identities=9%  Similarity=0.041  Sum_probs=77.5

Q ss_pred             hhHHHHHHhHHHHHHHHHHh----hhhcC-CCChhhH-HHHHHHHHHHHHHHHHh--cccCCCCCCCchHHHHHHHHHHh
Q 021469          159 VGGAMAVYGAFDAICSLAAG----RLTTG-LPSITFI-VSGGAIAQVVVFLWILI--NYSVTSGVLGTLYPLIMAALLGI  230 (312)
Q Consensus       159 ~g~v~~~~g~~~~ig~~~~G----~l~d~-~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~G~  230 (312)
                      .+......++.-++.+.+..    ++.|| .+.+... +.+|.++...++....+  .+..+....++++..+..+++|+
T Consensus       314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~  393 (475)
T TIGR00924       314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL  393 (475)
T ss_pred             HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence            45566667777677666544    44443 2212212 46777777666554322  12111111234567889999999


Q ss_pred             hhhHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          231 GDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       231 ~d~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      |+.+.....++++.+..|++ +.++++++.+..++|..++-.+.+.
T Consensus       394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~  439 (475)
T TIGR00924       394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATF  439 (475)
T ss_pred             HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999865 4689999999999999888666554

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=98.66  E-value=1.8e-06  Score=81.14  Aligned_cols=262  Identities=14%  Similarity=0.129  Sum_probs=146.1

Q ss_pred             cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCC--C----------CcCCCCchhhHHHH-HHHHHHHHHHHHhccCCc
Q 021469           24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD--K----------GGSTSGTTLLFIVF-LGVITLGTILMCFLRKEE   90 (312)
Q Consensus        24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~--~----------~~~~~~~~~~~~if-~~i~~~g~~l~lfL~~~~   90 (312)
                      +++++||-+++=|+.-..+..+=.++........  +          ..+....+..+.+= .-..+.+.++++..++++
T Consensus       145 ~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~  224 (438)
T COG2270         145 TKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAE  224 (438)
T ss_pred             CccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhcccccc
Confidence            4568899999999888877766666543322211  1          00111123332221 222334455566666665


Q ss_pred             cccccchhhcchhhhhHHHHHHHHHHHhh-cChhh--HHHHHHHHhhhhHhhhhh-hccccccccccccc--chhhHHHH
Q 021469           91 DKGEKETADASVNFYSYLVSLSKSITTLL-ADVRM--LLIIPLFAYSGLQQAFVW-AEFTKEIVTPALGV--SGVGGAMA  164 (312)
Q Consensus        91 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~-~~~~~--lll~p~~~~~G~~~~f~~-~~~~~~~~s~~lg~--~~~g~v~~  164 (312)
                      +..+..    +..-..++| ++++++|.. ++++.  .++.-+++.-|...-+-. +.|.++.    +|.  .++....+
T Consensus       225 ~~~~~~----~~~l~~g~k-~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~----~gls~~~lll~g~  295 (438)
T COG2270         225 KISSPP----PTALRNGFK-ELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAAD----LGLSSTELLLIGI  295 (438)
T ss_pred             cccccc----hHHHHHHHH-HHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHH----cCccHHHHHHHHH
Confidence            432111    011122333 344444433 33332  333333334454433332 2344321    233  34555555


Q ss_pred             HHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHH
Q 021469          165 VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLG  244 (312)
Q Consensus       165 ~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g  244 (312)
                      ...+..++|+++.|+|-||++.|+ ++.++.+.....-+...... ++      .-.++++.+.|+.-+-.|...=+.++
T Consensus       296 ~~~vvA~lg~ii~g~Ld~rfg~k~-vl~~~lvi~~~~~~~~~~~~-~~------~~f~i~gll~g~s~G~~qA~SRSy~~  367 (438)
T COG2270         296 ALSVVAALGAIIAGFLDERFGSKP-VLMIGLVILSIAALYLIFLE-GE------LDFWILGLLVGTSLGGAQASSRSYLA  367 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCce-eehHHHHHHHHHHHHHHHcc-cc------HHHHHHHHHHHHhcchHHHHHHHHHH
Confidence            667778999999999988998775 43445444433322222112 11      23677889999999999999999999


Q ss_pred             HhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh-----hHHHHHHHHHHHHHHHHHHHHHhhhh
Q 021469          245 ILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI-----SLQAMLIVMVVGICVALVGILFLTIQ  302 (312)
Q Consensus       245 ~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l-----~~~~~~~il~~~~~~~~~~~~~~~~~  302 (312)
                      ++.|+++ .+.|++|....=.++-.+=+.-+.+     +.+.....+.+++.++.+.+..+...
T Consensus       368 ~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~  431 (438)
T COG2270         368 RLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP  431 (438)
T ss_pred             HhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence            9998766 4789999998666665554433322     24445666667777777776666544

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=98.66  E-value=6e-06  Score=77.84  Aligned_cols=261  Identities=15%  Similarity=0.124  Sum_probs=126.7

Q ss_pred             ccccceeecccchhhhhhcCCCcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHH
Q 021469            2 GWRGGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI   81 (312)
Q Consensus         2 ~~aqG~Ylt~~s~~~~~~~~~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~   81 (312)
                      |.|+|.+....+. .++.   -++++|++..++......+|.++|.++...+....      ..+..|.+..++..+..+
T Consensus        90 G~g~~~~~~~~~~-~~~~---~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~------gWr~~f~~~~~l~~~~~~  159 (368)
T TIGR00903        90 ALGQPFLLNAFAP-AASQ---IREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG------GLQLLIIPIAAVAAAGII  159 (368)
T ss_pred             HhHhHHHHHHHHH-HHHH---cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc------chHHHHHHHHHHHHHHHH
Confidence            6677754422221 1221   23578999999999999999999998887775421      245677666666666555


Q ss_pred             HH-HhccCCccccccchhhcchhhhhHHHHHHHHHHHhhcChhhHHHHHHHHh-hhhHhhhhhhcccccccccccccc-h
Q 021469           82 LM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAY-SGLQQAFVWAEFTKEIVTPALGVS-G  158 (312)
Q Consensus        82 l~-lfL~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~-~G~~~~f~~~~~~~~~~s~~lg~~-~  158 (312)
                      +. .++|++++++++. .     +.+   +..++..++++||+.+.+....+. .....++. +-.|+-+ .+ .|.+ .
T Consensus       160 ~~~~~lp~~p~~~~~~-~-----~~~---~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~-~wlp~~L-~~-~g~s~~  227 (368)
T TIGR00903       160 LVLAALPALPFQAAEG-F-----GFK---DAVKEFGALAGRKDLWIIGAILGFGVALFDNLA-IWLEAAL-RP-AGLEDI  227 (368)
T ss_pred             HHHHHcCCCCCCCCCC-c-----chH---HHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHH-HHHHHHH-HH-CCCChH
Confidence            43 4565533221110 0     001   112334467788887555433322 22222221 1122222 11 1221 1


Q ss_pred             hhHHHHHHhHHHHHHHHHHhhhhcCCCC---hhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          159 VGGAMAVYGAFDAICSLAAGRLTTGLPS---ITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       159 ~g~v~~~~g~~~~ig~~~~G~l~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      .+....+..+...++   .+.+.||..|   |+.......++...... .. .+..+     +........+.|++-...
T Consensus       228 ~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~-~~-~~~~~-----~~~~~~~~~l~~~~~~~~  297 (368)
T TIGR00903       228 AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFL-AL-AFELN-----RLALFAFIGIAGLLMLPA  297 (368)
T ss_pred             HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHH-HH-HHccc-----cHHHHHHHHHHHHhhhhh
Confidence            233333333334444   4566676532   32222212222111111 11 12212     122333344445544444


Q ss_pred             hhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHh-hhhh-hHHHHHHHHHHHHHHHHH
Q 021469          236 NTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFI-GPYI-SLQAMLIVMVVGICVALV  294 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~-~~~l-~~~~~~~il~~~~~~~~~  294 (312)
                      ....+.+..+.+|++. ..+.++.+....+|..++-.. ...+ .....+.+..+..+++.+
T Consensus       298 ~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~~  359 (368)
T TIGR00903       298 YAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFISSAEAYFTFLAILITIAFA  359 (368)
T ss_pred             HHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence            4556778889998644 678999998888887444333 3333 233333333444444433

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=98.63  E-value=9.7e-06  Score=78.45  Aligned_cols=152  Identities=13%  Similarity=0.030  Sum_probs=74.1

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhH-----hhcCC-CC--c-CCC---CchhhHHHHHHHHHHHHHHHHhccCCccc
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLA-----VLKDD-KG--G-STS---GTTLLFIVFLGVITLGTILMCFLRKEEDK   92 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~-----~~~~~-~~--~-~~~---~~~~~~~if~~i~~~g~~l~lfL~~~~~~   92 (312)
                      ++++|+..|++-+.-++|..++.++.-.     +.... .+  . ..+   ..+..+.++..+.++..+++.++.+++++
T Consensus       158 ~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~  237 (462)
T PRK15034        158 KAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS  237 (462)
T ss_pred             HhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence            4679999999988888888777765532     11110 00  0 000   01233445555555666555544332221


Q ss_pred             cccchhhcchhhhhHHHHHHHHHHHhhcChhhHHHHH-HHHhhhhHhhhh--hhcccccccccccccchhhHHHHHHhHH
Q 021469           93 GEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIP-LFAYSGLQQAFV--WAEFTKEIVTPALGVSGVGGAMAVYGAF  169 (312)
Q Consensus        93 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~lll~p-~~~~~G~~~~f~--~~~~~~~~~s~~lg~~~~g~v~~~~g~~  169 (312)
                      ++           .+    +++..+.+|+|+..++.- ++.-.|.+.+|.  ...|.+..    .+.........+..+.
T Consensus       238 ~~-----------~~----~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~----~~~~~~l~~~~l~~l~  298 (462)
T PRK15034        238 SR-----------AS----IADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQ----FPDVNILRLAFFGPFI  298 (462)
T ss_pred             cc-----------cC----HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH----cChHHHHHHHHHHHHH
Confidence            11           11    234456778887633322 222233333332  21221111    1111111112234566


Q ss_pred             HHHHHHHHhhhhcCCCChhhHHHHHHH
Q 021469          170 DAICSLAAGRLTTGLPSITFIVSGGAI  196 (312)
Q Consensus       170 ~~ig~~~~G~l~d~~~~~~~~~~~~~~  196 (312)
                      ..++..++|+|.||+++++.+ .++.+
T Consensus       299 ~~l~rplgG~LADRiG~~~vl-~~~~i  324 (462)
T PRK15034        299 GAIARSVGGAISDKFGGVRVT-LINFI  324 (462)
T ss_pred             HHHHHHhhHHHHHhcCchHHH-HHHHH
Confidence            777778999999999877533 33433

>PRK11462 putative transporter; Provisional

Probab=98.63  E-value=7.4e-06  Score=79.52  Aligned_cols=229  Identities=11%  Similarity=0.008  Sum_probs=115.1

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcC-CCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchh
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKD-DKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVN  103 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~-~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~  103 (312)
                      +++|.+..+......+.+..++.++...+... .++...........++.+++++...++.+. .+|++++++       
T Consensus       141 ~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~-~kE~~~~~~-------  212 (460)
T PRK11462        141 PTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFT-TKERVEAPP-------  212 (460)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhc-ceeccCCCc-------
Confidence            46788888888877777777776664333221 111000111223444444444444333322 232221111       


Q ss_pred             hhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhc---ccccccccccccc-hhhHHHHHHhHHHHHHHHHHhh
Q 021469          104 FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAE---FTKEIVTPALGVS-GVGGAMAVYGAFDAICSLAAGR  179 (312)
Q Consensus       104 ~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~---~~~~~~s~~lg~~-~~g~v~~~~g~~~~ig~~~~G~  179 (312)
                      ++.+.++.+++   +++||..+.+....+..........+.   |.+-+    +|.. ..+.++.++++..+++..+.++
T Consensus       213 ~~~~~~~~l~~---~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~----~g~~~~~~~~l~~~~i~~iig~~l~~~  285 (460)
T PRK11462        213 TTTSMREDLRD---IWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWI----LGTPEVFVAFLTTYCVGNLIGSALAKP  285 (460)
T ss_pred             cCCCHHHHHHH---HhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhh----cCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            12234554443   466777766654433333322222221   21111    2322 2345667888999999999999


Q ss_pred             hhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhcc-------CChh
Q 021469          180 LTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFK-------HDTE  252 (312)
Q Consensus       180 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~-------~~~~  252 (312)
                      +.||+++|+..+ .+.........+.+ ..++++    +...++..+++|++.+..+...++++++.-+       ++.|
T Consensus       286 l~~r~gkk~~~~-~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~  359 (460)
T PRK11462        286 LTDWKCKVTIFW-WTNALLAVISLAMF-FVPMQA----SITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLT  359 (460)
T ss_pred             HHHHhChHHHHH-HHHHHHHHHHHHHH-HhchhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCch
Confidence            999998765333 22222222222222 222221    1234555677788877777766777766533       2223


Q ss_pred             -hhHHHHHHHHHHHHHHHHHhhh
Q 021469          253 -GAFAQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       253 -~afa~~~~~qs~g~ai~f~~~~  274 (312)
                       ..++...+.+-+|.+++-.+.+
T Consensus       360 g~~~a~~~f~~Klg~alg~~i~g  382 (460)
T PRK11462        360 GISFAGTLFVLKLGLAFGGALIG  382 (460)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence             3366666667666666655433

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=98.62  E-value=2.1e-05  Score=76.97  Aligned_cols=110  Identities=12%  Similarity=0.090  Sum_probs=76.3

Q ss_pred             HHhHHHHHHHHHHhhhhcCCCChhh------HHHHHHHHHHHHHHHHH---hcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          165 VYGAFDAICSLAAGRLTTGLPSITF------IVSGGAIAQVVVFLWIL---INYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       165 ~~g~~~~ig~~~~G~l~d~~~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      ..++..++.+.+.+++.||.++|+.      .+.+|.++...+++.+.   ..+....+...+++....+++.|+|..+.
T Consensus       317 ~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~  396 (489)
T PRK10207        317 LNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFI  396 (489)
T ss_pred             HhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHH
Confidence            4556666777778888888765431      24566666655554321   01111111122355667899999999999


Q ss_pred             hhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhh
Q 021469          236 NTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~  274 (312)
                      ....++.+.+..|++. ..+.+++.+.+++|.+++-.++.
T Consensus       397 ~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~  436 (489)
T PRK10207        397 SALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVAT  436 (489)
T ss_pred             hHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999988654 67899999999999999987764

>PRK10133 L-fucose transporter; Provisional

Probab=98.62  E-value=1e-05  Score=78.08  Aligned_cols=146  Identities=13%  Similarity=-0.008  Sum_probs=87.4

Q ss_pred             HHhhcChhhHH-HHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHH
Q 021469          116 TTLLADVRMLL-IIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVS  192 (312)
Q Consensus       116 ~~~~~~~~~ll-l~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~  192 (312)
                      .+++++|+... ++-.+++.+.+.+.+.- .+.-+..+..|  ....++.+..++++.++|.++.|++.||+++|+.+ .
T Consensus       252 ~~ll~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l-~  329 (438)
T PRK10133        252 SRLARIRHWRWAVLAQFCYVGAQTACWSY-LIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVL-A  329 (438)
T ss_pred             HHHHhCchHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH-H
Confidence            35677887543 33344555555433321 11111112223  34678889999999999999999999999876533 3


Q ss_pred             HHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHh
Q 021469          193 GGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFI  272 (312)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~  272 (312)
                      .+.++......+ .... +.      .......+++|++-+.....+++...+.++++...+.++.. .+..|.++.-.+
T Consensus       330 ~~~~~~~~~~~~-~~~~-~~------~~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~as~l~~-~~~~g~~~~~~i  400 (438)
T PRK10133        330 AYALIAMALCLI-SAFA-GG------HVGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIV-MTIIGGGIVTPV  400 (438)
T ss_pred             HHHHHHHHHHHH-HHHc-CC------hHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhccchhHHh-HHhccchHHHHH
Confidence            443333322222 1122 22      12455677899999999999999998888776555666654 344554444333

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=98.61  E-value=2.3e-06  Score=82.68  Aligned_cols=151  Identities=14%  Similarity=-0.020  Sum_probs=79.0

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhcc--CCccccccchhhc--
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLR--KEEDKGEKETADA--  100 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~--~~~~~~~~~~~~~--  100 (312)
                      +++|++..|+.....+.+.++|..+...+.....     ..+..|.+..++.++..++..+++  +|+.+++.++++.  
T Consensus       162 ~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~-----gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  236 (465)
T TIGR00894       162 PKERSRLLGMSTSGFQLGTFIFLPISGWLCESWG-----GWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKY  236 (465)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-----CCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHH
Confidence            3689999999999999999999988766543210     124455555555555544443332  2322111110000  


Q ss_pred             -----chhh-hhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHH
Q 021469          101 -----SVNF-YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAI  172 (312)
Q Consensus       101 -----~~~~-~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~i  172 (312)
                           +.++ +...+   ....+.++++++..+....+...+.......-.|. +..+..|  ....|+......++..+
T Consensus       237 i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~-~l~~~~g~s~~~~g~~~~~~~~~~~i  312 (465)
T TIGR00894       237 INSSLQGQKGSTRQS---LPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPT-FISWVLRVSGKENGLLSSLPYLFAWL  312 (465)
T ss_pred             HHhhcccccCCCCCC---CCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCcChHHhHHHHHHHHHHHHH
Confidence                 0000 00000   01234567777655554333222221111111121 1122223  34567777788889999


Q ss_pred             HHHHHhhhhcCC
Q 021469          173 CSLAAGRLTTGL  184 (312)
Q Consensus       173 g~~~~G~l~d~~  184 (312)
                      ++.+.|++.||+
T Consensus       313 ~~~~~g~l~d~~  324 (465)
T TIGR00894       313 CSIFAGYLADFL  324 (465)
T ss_pred             HHHHHHHHHHHH
Confidence            999999999975

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=98.58  E-value=2.3e-06  Score=78.58  Aligned_cols=131  Identities=19%  Similarity=0.216  Sum_probs=99.1

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      ..++|++...+.++..+++.+.|++.||++||+ ++.++.++...+..+..  +.++     .+..++..++.|++.+..
T Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~l~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~l~g~~~~~~  102 (352)
T PF07690_consen   31 PSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRR-VLIIGLLLFALGSLLLA--FASN-----FWLLLIARFLLGIGSGFF  102 (352)
T ss_dssp             SHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHH-HHHHHHHHHHHHHHHHH--HHCC-----HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCee-eEeehhhhhhhHHHHhh--hhhh-----HHHHhhhccccccccccc
Confidence            356888999999999999999999999999776 66667666665522222  2222     245788899999999999


Q ss_pred             hhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhhh----HHHHHHHHHHHHHHHHH
Q 021469          236 NTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYIS----LQAMLIVMVVGICVALV  294 (312)
Q Consensus       236 ~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l~----~~~~~~il~~~~~~~~~  294 (312)
                      ......++.+.+|+ ++..+++......++|..++..+.+.+.    .++.+++..++.+++.+
T Consensus       103 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~i  166 (352)
T PF07690_consen  103 SPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAI  166 (352)
T ss_dssp             HHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHH
T ss_pred             cccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhh
Confidence            99999999999986 5678999999999999999988888652    33345555555555544

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=98.58  E-value=6.8e-06  Score=80.47  Aligned_cols=108  Identities=14%  Similarity=-0.037  Sum_probs=59.5

Q ss_pred             HHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHH
Q 021469          165 VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLG  244 (312)
Q Consensus       165 ~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g  244 (312)
                      ...++.+++.++.+.+.||++||+ +++++..+...+...+.....+.+.  ...+.. ..+...+....+....+.+..
T Consensus       343 ~~~~~~i~g~~~~~~l~dr~gRR~-~l~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~  418 (502)
T TIGR00887       343 IALAGTVPGYWVTVFLVDIIGRKP-IQLMGFFILTVLFFVLGFAYNHLST--HGFLAI-YVLAQFFANFGPNATTFIVPG  418 (502)
T ss_pred             HHHHHHHHHHHHHHHHhhhhcchh-HHHHHHHHHHHHHHHHHHHHHhcch--hHHHHH-HHHHHHHHhcCCCchhhhhhh
Confidence            344567778899999999999875 4334443333222221111211110  011111 111111222223344555667


Q ss_pred             HhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          245 ILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       245 ~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      +.+|.+ +..+.++...+..+|.+++-.+-+.+
T Consensus       419 E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l  451 (502)
T TIGR00887       419 EVFPTRYRSTAHGISAASGKAGAIIGQFGFLYL  451 (502)
T ss_pred             ccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhh
Confidence            888865 46789999999999988877665543

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=98.54  E-value=1.4e-05  Score=81.59  Aligned_cols=109  Identities=12%  Similarity=0.070  Sum_probs=75.5

Q ss_pred             hHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhh
Q 021469          160 GGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQL  239 (312)
Q Consensus       160 g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~  239 (312)
                      ....++.++++++|.++.|.+.||+|||+ ++.++.++..++.++.  .+.++     .....+..+++|++-+...+..
T Consensus       598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~-~l~~~~~lsai~~ll~--~~~~s-----~~~ll~~~~l~g~~~~~~~~~~  669 (742)
T TIGR01299       598 YFVNFLGTLAVLPGNIVSALLMDKIGRLR-MLAGSMVLSCISCFFL--SFGNS-----ESAMIALLCLFGGLSIAAWNAL  669 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCHH-HHHHHHHHHHHHHHHH--HHHcc-----HHHHHHHHHHHHHHHHHHHHHH
Confidence            34456778899999999999999999876 4445554444332221  12222     1223444556677666666778


Q ss_pred             HhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          240 SALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       240 ~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      +.++++++|.+. ..++++......+|..++-.+.+.+
T Consensus       670 ~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L  707 (742)
T TIGR01299       670 DVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSF  707 (742)
T ss_pred             HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            899999998654 6799999999999999988877643

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>TIGR00900 2A0121 H+ Antiporter protein

Probab=98.54  E-value=4e-06  Score=77.28  Aligned_cols=116  Identities=16%  Similarity=0.084  Sum_probs=85.8

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHH-HhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI-LINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      .++|.+...+.++..+++.+.|++.||++||+ .+..+.++...+..+. +....++.   +.+..++..++.|++.+..
T Consensus        34 ~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~g~~~~~~  109 (365)
T TIGR00900        34 SVLSLAALAGMLPYVVLSPIAGALADRYDRKK-VMIGADLIRAVLVAVLPFVALLGGL---NIWQVYVLAGILAIAQAFF  109 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhHHHHhhchhH-HHHHHHHHHHHHHHHHHHHHHcCCC---cHHHHHHHHHHHHHHHHHH
Confidence            46788888999999999999999999999876 4444444433332222 21221211   1345677888899999999


Q ss_pred             hhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          236 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ....++++.+.+|++ +.++++......++|..++-.+...+
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l  151 (365)
T TIGR00900       110 TPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLM  151 (365)
T ss_pred             HHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998754 46789999999999999888877764

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=98.50  E-value=7.1e-05  Score=71.39  Aligned_cols=155  Identities=16%  Similarity=0.138  Sum_probs=103.6

Q ss_pred             HHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc---cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhh
Q 021469          113 KSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG---VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITF  189 (312)
Q Consensus       113 ~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg---~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~  189 (312)
                      ++.++++|||+++.++-..+..+...+.+.+-.+- +..+ +|   .+..|.++.+.-++|++.=...+++.+|++-++ 
T Consensus       198 ~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~-yl~~-~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~-  274 (400)
T PF03825_consen  198 LDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSI-YLQE-LGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKW-  274 (400)
T ss_pred             hHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH-
Confidence            34578999999988877777777776666543221 1111 13   245677777778889999999999999998554 


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHH----HHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHHH-HHH
Q 021469          190 IVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM----AALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKV-WQC  263 (312)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~-~qs  263 (312)
                      ++.++.+....=|.+.  .+-+|++    +...++    -.+.|++-+.+.......+.+..|++. .++=+++.. ...
T Consensus       275 ll~~a~~~~~vR~~l~--a~~~~~~----~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~G  348 (400)
T PF03825_consen  275 LLLLALVAYAVRWLLY--AYFSDPW----PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFG  348 (400)
T ss_pred             HHHHHHHHHHHHHHHH--HHhcCCc----HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhh
Confidence            6666666654444332  2221211    112222    346899999988888888888888655 467777665 467


Q ss_pred             HHHHHHHHhhhhh
Q 021469          264 ASIAVVFFIGPYI  276 (312)
Q Consensus       264 ~g~ai~f~~~~~l  276 (312)
                      +|.+++..+++.+
T Consensus       349 lg~~iG~~igG~l  361 (400)
T PF03825_consen  349 LGGAIGSLIGGWL  361 (400)
T ss_pred             HHHHHHHHHHHHH
Confidence            8999988888865

>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=98.49  E-value=2.1e-06  Score=83.78  Aligned_cols=159  Identities=16%  Similarity=0.066  Sum_probs=95.2

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHH-HHhccC-Ccccc--ccchh--
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRK-EEDKG--EKETA--   98 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l-~lfL~~-~~~~~--~~~~~--   98 (312)
                      ++++|+-.|+|++..++|+++|+++++.+.+..+.......+.+|++=.+++++..++ +++||+ |++..  +++++  
T Consensus       165 ~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~  244 (495)
T KOG2533|consen  165 KSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKEL  244 (495)
T ss_pred             hhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHH
Confidence            3689999999999999999999999999876322211223456777776666665544 566764 55321  11110  


Q ss_pred             ---hcc-hh-hhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHH
Q 021469           99 ---DAS-VN-FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDA  171 (312)
Q Consensus        99 ---~~~-~~-~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~  171 (312)
                         +.+ .+ +..+-+.+.++..+.++||++..+....+........... +...+.+...|  ..+.....+.+.++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~-~lpl~l~~~~~~s~~~a~~ls~~~~~~g~  323 (495)
T KOG2533|consen  245 VVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSY-WLPLYLKSNGGYSELQANLLSTPYDVGGI  323 (495)
T ss_pred             HHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHH-HHHHHHHcCCCcChHHhccccchHHhhhH
Confidence               000 00 0000013456678889999998887766665544331211 11111111111  1234455567889999


Q ss_pred             HHHHHHhhhhcCC
Q 021469          172 ICSLAAGRLTTGL  184 (312)
Q Consensus       172 ig~~~~G~l~d~~  184 (312)
                      ++.++.|.++||+
T Consensus       324 v~~i~ag~lsdr~  336 (495)
T KOG2533|consen  324 VGLILAGYLSDRL  336 (495)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999999994

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=98.48  E-value=4e-05  Score=73.24  Aligned_cols=231  Identities=11%  Similarity=-0.004  Sum_probs=118.4

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCc-C-------------------CCCchhhHHHHHHHHHHHHHHHH
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG-S-------------------TSGTTLLFIVFLGVITLGTILMC   84 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~-~-------------------~~~~~~~~~if~~i~~~g~~l~l   84 (312)
                      ++++++..++....++++..+|.++...+.....+. .                   ....+..|.+..++.++..++..
T Consensus       125 ~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~  204 (410)
T TIGR00885       125 ESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIM  204 (410)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            356888899999999999999998887665321100 0                   00123345444443333333333


Q ss_pred             hccCCccccccchhhcchhhhhHHHHHHHHHHHhhcChhhHH-HHHHHHhhhhHhhhhhhccccccccccccc--chhhH
Q 021469           85 FLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLL-IIPLFAYSGLQQAFVWAEFTKEIVTPALGV--SGVGG  161 (312)
Q Consensus        85 fL~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ll-l~p~~~~~G~~~~f~~~~~~~~~~s~~lg~--~~~g~  161 (312)
                      +.+.|+.+++++ +      +.+.+++.+   +++++|+.++ .+..++|.|.+.+.+. ..++-......+.  ...+.
T Consensus       205 ~~~~p~~~~~~~-~------~~~~~~~~~---~~~~~~~~~~~~l~~f~yvg~e~~~~s-~l~~y~~~~~~~~~~~~a~~  273 (410)
T TIGR00885       205 LTKMPALNHSDA-K------QISFSASLS---RLARIRHYREGVIAQFFYVGVQIMCWT-FIIQYAVRLIPGMTAGFAAN  273 (410)
T ss_pred             HhcCCCCCcccc-c------cccchhhHH---HHHhChhHHHHHHHHHHHHHHHHHHHH-HHHHHHhhccCCCCHHHHHH
Confidence            333343221111 0      111222222   4567777644 6678889999877652 1111110100111  11122


Q ss_pred             HHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHh
Q 021469          162 AMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSA  241 (312)
Q Consensus       162 v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~  241 (312)
                      .+..+..+.++|-+++|.+.||+++|+.+ .+..+......++..  +.++      .....+.++.|++-+.....+++
T Consensus       274 ~~~~~~~~~~vGR~~~~~l~~r~~~~~~l-~i~~~~~~~~~ll~~--~~~~------~~~~~~l~~~glf~s~~fp~i~s  344 (410)
T TIGR00885       274 YNIGAMVIFFISRFIGTWLISYLAAHKVL-MAYAIIGMALCLGSI--FAGG------HVGLYCLTLCSAFMSLMFPTIYG  344 (410)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCHHHHH-HHHHHHHHHHHHHHH--HcCC------hHHHHHHHHHHHHHHHHHHHHHH
Confidence            34445566788999999999999766533 333333332222211  2122      12445555566655555588888


Q ss_pred             HHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          242 LLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       242 i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      +.-+..+++...+.+..-.. .+|.++.=.+...+
T Consensus       345 l~~~~~g~~~~~~s~~l~~~-~~Gga~~p~l~G~~  378 (410)
T TIGR00885       345 IALKGLGQDTKYGAAGLVMA-IIGGGIVPPLQGFI  378 (410)
T ss_pred             HHHhhhhhhhhhhHHHHHHH-HhccchHHHHHHHH
Confidence            88887776654333333332 25655554444433

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=98.47  E-value=3.8e-05  Score=74.46  Aligned_cols=254  Identities=15%  Similarity=0.057  Sum_probs=124.6

Q ss_pred             cceeecccchhhhhhcCCCcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHH
Q 021469            5 GGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC   84 (312)
Q Consensus         5 qG~Ylt~~s~~~~~~~~~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~l   84 (312)
                      +.-|++|+|.+          +.||.....--.....+.++|..++.=-.-+    +++....++..-.+.+.+..++..
T Consensus       137 ~pmyl~E~sP~----------~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilG----t~~~W~~l~~~~~i~~~~~l~~l~  202 (485)
T KOG0569|consen  137 VPMYLTEISPK----------NLRGALGTLLQIGVVIGILLGQVLGLPSLLG----TEDLWPYLLAFPLIPALLQLALLP  202 (485)
T ss_pred             HHHHHhhcChh----------hhccHHHHHHHHHHHHHHHHHHHHccHHhcC----CCcchHHHHHHHHHHHHHHHHHHh
Confidence            44799999976          5777766544444444444444433211111    112234555555666677777777


Q ss_pred             hccCCccc---cccch-----------------hhcchhhhhHHHH-----HHHHHHHhhcChhhHHHHHHHHhhhhHhh
Q 021469           85 FLRKEEDK---GEKET-----------------ADASVNFYSYLVS-----LSKSITTLLADVRMLLIIPLFAYSGLQQA  139 (312)
Q Consensus        85 fL~~~~~~---~~~~~-----------------~~~~~~~~~s~~~-----~~~~~~~~~~~~~~lll~p~~~~~G~~~~  139 (312)
                      ++|+.+|-   +++|.                 ++.++..+..-.+     +-.+..++++|++.+.-....+..-+.+-
T Consensus       203 ~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq  282 (485)
T KOG0569|consen  203 FLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQ  282 (485)
T ss_pred             cCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHH
Confidence            77764431   01110                 0000000000001     11135567777776554333333222222


Q ss_pred             hhhh----ccccccccccccc--chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHH--hcccC
Q 021469          140 FVWA----EFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL--INYSV  211 (312)
Q Consensus       140 f~~~----~~~~~~~s~~lg~--~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  211 (312)
                      |-..    .|...+..+ .|.  ...-++....|+.+.+.+++...+.||.||| |+++.+..+...+.+++.  .....
T Consensus       283 ~sGi~ai~~Yst~i~~~-aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR-pLll~~~~~~~~~~~~~~~~~~l~~  360 (485)
T KOG0569|consen  283 FSGINAIFFYSTSIFKT-AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR-PLLLISLSLMAVALLLMSIALFLSN  360 (485)
T ss_pred             hcCcceeHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2211    122222111 133  3346677778889999999999999999976 566666555443322221  11111


Q ss_pred             CC-CCCCchHHHHHHHHHHhhhhHHhhhhHh-HHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          212 TS-GVLGTLYPLIMAALLGIGDGVLNTQLSA-LLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       212 ~~-~~~~~~~~~~~~~l~G~~d~~~~t~~~~-i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      .. ++.. +.+.+..+++.+.-++--.-+.| +.++++|. ++..|+++-...+.+...+.=..-+.
T Consensus       361 ~~~~~~~-y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~  426 (485)
T KOG0569|consen  361 SFGSWLS-YLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPP  426 (485)
T ss_pred             HhhhHHH-HHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11 1111 12334444444444444344444 55667764 44567777777666665554444343

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=98.43  E-value=7.4e-06  Score=77.34  Aligned_cols=120  Identities=18%  Similarity=0.070  Sum_probs=81.4

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHH-HHhcccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLW-ILINYSVTSGVLGTLYPLIMAALLGIGDGV  234 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~  234 (312)
                      ...+|.++.++.++..+++.+.|++.||++||+ ++..+.++.....+. .+..+..+.+..+....++..++.|++++.
T Consensus        50 ~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~  128 (399)
T PRK05122         50 AFLAGLVISLQYLATLLSRPHAGRYADTLGPKK-AVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESL  128 (399)
T ss_pred             HHHHHHHHHHHHHHHHHhchhhHhHHhccCCcc-hHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHh
Confidence            456899999999999999999999999999876 444554443322221 111111111101123456778899999999


Q ss_pred             HhhhhHhHHHHhcc-CChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          235 LNTQLSALLGILFK-HDTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       235 ~~t~~~~i~g~~~~-~~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ........+.+.+| +++.++++......+.|..++-.+...+
T Consensus       129 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l  171 (399)
T PRK05122        129 AGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLL  171 (399)
T ss_pred             hcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHH
Confidence            88887777777775 4446788888888888877777666543

>PRK10054 putative transporter; Provisional

Probab=98.42  E-value=1.1e-05  Score=76.64  Aligned_cols=113  Identities=18%  Similarity=0.110  Sum_probs=80.9

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      ..++|+++..+.++.++++.+.|++.||++||+ ++.++.+.....+++.  .+.++     ++..++...+.|.+.+..
T Consensus        42 ~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~g~~~~~~  113 (395)
T PRK10054         42 VDLIGYAMTIALTIGVVFSLGFGILADKFDKKR-YMLLAITAFASGFIAI--PLVNN-----VTLVVLFFALINCAYSVF  113 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcch-hHHHHHHHHHHHHHHH--HHHhH-----HHHHHHHHHHHHHHHHHH
Confidence            356899999999999999999999999999775 4445555444443322  12222     223444455677777777


Q ss_pred             hhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          236 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      .........+..+++ +.+++++.+...++|.+++-.+.+.+
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l  155 (395)
T PRK10054        114 STVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLL  155 (395)
T ss_pred             HHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            777777888887654 46789999999999999988777764

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=98.41  E-value=1.8e-05  Score=73.80  Aligned_cols=113  Identities=18%  Similarity=0.102  Sum_probs=85.8

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      .+++|++...+.++..+++.+.|++.||++||+ .+..+.++...+..+..  +.++     .+..++..++.|++.+..
T Consensus        39 ~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~-~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~l~g~~~~~~  110 (385)
T TIGR00710        39 ASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRP-VLLLGLFIFALSSLGLA--LSNN-----IETLLVLRFVQAFGASAG  110 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChH-HHHHHHHHHHHHHHHHH--HHcc-----HHHHHHHHHHHHcchhHH
Confidence            356888999999999999999999999999775 44455545444433322  2122     244667788999999999


Q ss_pred             hhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          236 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      .+..+.++.+.+|++ +.++++.......+|..++-.+.+.+
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l  152 (385)
T TIGR00710       111 SVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYI  152 (385)
T ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998754 46789999999999988887777654

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=98.41  E-value=1.9e-05  Score=77.44  Aligned_cols=138  Identities=18%  Similarity=0.270  Sum_probs=87.1

Q ss_pred             hHHHHHHhHHHHHHHHHHhhhhcC-CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhh
Q 021469          160 GGAMAVYGAFDAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQ  238 (312)
Q Consensus       160 g~v~~~~g~~~~ig~~~~G~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~  238 (312)
                      +.+...+.........++|++.|| ++||+ .+.++.++...+..+..  +.++.    ....++..++.|++.+.....
T Consensus        60 ~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~-~~~~g~~~~~ig~~l~~--~~~~~----~~~l~~~~~l~gig~g~~~~~  132 (500)
T PRK09584         60 ITLFSSFSALVYGLVAIGGWLGDKVLGTKR-VIMLGAIVLAIGYALVA--WSGHD----AGIVYMGMATIAVGNGLFKAN  132 (500)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccchHH-HHHHHHHHHHHHHHHHH--Hhccc----HHHHHHHHHHHHHhhhcccCC
Confidence            444444444444555688999999 58775 55566655554443322  22111    123445557789999988888


Q ss_pred             hHhHHHHhccCCh---hhhHHHHHHHHHHHHHHHHHhhhhhh----HHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 021469          239 LSALLGILFKHDT---EGAFAQLKVWQCASIAVVFFIGPYIS----LQAMLIVMVVGICVALVGILFLTIQVE  304 (312)
Q Consensus       239 ~~~i~g~~~~~~~---~~afa~~~~~qs~g~ai~f~~~~~l~----~~~~~~il~~~~~~~~~~~~~~~~~~~  304 (312)
                      ...++++.||+++   ..++++++...++|.+++-.+.+.+.    .++.+.+..+..+++++.+....++.+
T Consensus       133 ~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~  205 (500)
T PRK09584        133 PSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVK  205 (500)
T ss_pred             HHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhc
Confidence            8899999997543   24799999999999999988887652    233344444444566555555544333

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=98.41  E-value=1.3e-05  Score=76.40  Aligned_cols=113  Identities=17%  Similarity=0.098  Sum_probs=85.3

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      ..+.|.+...+.++..+++.+.|++.||++||+ .+.++.++...+.++.. ..+...+   .+..++..++.|++.+..
T Consensus        70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~-~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~r~l~G~~~~~~  144 (481)
T TIGR00879        70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKK-SLLIIALLFVIGAILMG-LAAFALS---VEMLIVGRVLLGIGVGIA  144 (481)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHH-HHHHHHHHHHHHHHHHH-Hhccccc---hHHHHHHHHHHHhhhhHH
Confidence            456889999999999999999999999999776 44455544443333321 1111111   134677889999999999


Q ss_pred             hhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhh
Q 021469          236 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIG  273 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~  273 (312)
                      ....+.++++.+|++ +..+.+++....++|..++..+.
T Consensus       145 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~  183 (481)
T TIGR00879       145 SALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG  183 (481)
T ss_pred             HhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence            998999999998754 46789999999999999999888

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=98.40  E-value=1.2e-05  Score=78.32  Aligned_cols=136  Identities=12%  Similarity=0.162  Sum_probs=96.1

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcC-CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      .+.|.++..+.++..+++.++|++.|| ++||+ .+.++.++....+.+..  +.++     ++..++..++.|++.+..
T Consensus        48 ~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~-~l~~~~~~~~~g~~~~~--~~~~-----~~~~~~~~~l~g~g~g~~  119 (475)
T TIGR00924        48 EQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKK-TMVLGGIVLMLGHFMLA--MSIY-----PDLIFYGLGTIAVGSGLF  119 (475)
T ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHH-HHHHHHHHHHHHHHHHH--hccc-----HhHHHHHHHHHHhccccc
Confidence            467889999999999999999999999 78775 55566666655544332  2222     123455667789999999


Q ss_pred             hhhhHhHHHHhccCC----hhhhHHHHHHHHHHHHHHHHHhhhhhh----HHHHHHHHHHHHHHHHHHHHHhh
Q 021469          236 NTQLSALLGILFKHD----TEGAFAQLKVWQCASIAVVFFIGPYIS----LQAMLIVMVVGICVALVGILFLT  300 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~----~~~afa~~~~~qs~g~ai~f~~~~~l~----~~~~~~il~~~~~~~~~~~~~~~  300 (312)
                      ......++++.+|++    ++.++++++...++|.+++..+.+.+.    .+.-+.+..+.++++.+.+....
T Consensus       120 ~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~  192 (475)
T TIGR00924       120 KANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGR  192 (475)
T ss_pred             cCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcc
Confidence            999999999999743    346899999999999999998887652    22333333344444555444433

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=98.36  E-value=2.1e-05  Score=76.96  Aligned_cols=135  Identities=15%  Similarity=0.185  Sum_probs=89.9

Q ss_pred             hhhHHHHHHhHHHHHHHHHHhhhhcC-CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          158 GVGGAMAVYGAFDAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       158 ~~g~v~~~~g~~~~ig~~~~G~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ....+...+.....+...++|++.|| +|||+ .+..+.++.......+..  .++.    +.+.++.-++.|++.+...
T Consensus        51 ~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~-~~~~g~~~~~~g~~~~~~--~~~~----~~ll~~~~~l~~ig~g~~~  123 (489)
T PRK10207         51 QAFITFGAFAALVYGLISIGGYVGDHLLGTKR-TIVLGAIVLAIGYFMTGM--SLLK----PDLIFIALGTIAVGNGLFK  123 (489)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHhhhhccchHH-HHHHHHHHHHHHHHHHHH--hccc----hhHHHHHHHHHHhcccccc
Confidence            34555556666667777899999999 89776 556666666555443332  2221    1234455677899999999


Q ss_pred             hhhHhHHHHhccCCh---hhhHHHHHHHHHHHHHHHHHhhhhhh----HHHHHHHHHHHHHHHHHHHHHh
Q 021469          237 TQLSALLGILFKHDT---EGAFAQLKVWQCASIAVVFFIGPYIS----LQAMLIVMVVGICVALVGILFL  299 (312)
Q Consensus       237 t~~~~i~g~~~~~~~---~~afa~~~~~qs~g~ai~f~~~~~l~----~~~~~~il~~~~~~~~~~~~~~  299 (312)
                      .....++++.||+++   +.+++.+.+..++|.+++-.+.+.+.    .++-+++..+.++++++.+...
T Consensus       124 ~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~  193 (489)
T PRK10207        124 ANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFAC  193 (489)
T ss_pred             CCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHc
Confidence            889999999997543   45899999999999999988888763    2223333323344445555444

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=98.36  E-value=1.8e-05  Score=74.91  Aligned_cols=113  Identities=16%  Similarity=0.059  Sum_probs=88.9

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      ..++|.+...+.++..+++.+.|++.||++||+ ++..+..+...+.+..  .+.++     ++..++..++.|++.+..
T Consensus        43 ~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~-~l~~~~~l~~~~~~~~--~~a~~-----~~~ll~~r~l~Gig~~~~  114 (393)
T PRK09705         43 FSVAALLTALPVVTMGGLALAGSWLHQHVSERR-SVAISLLLIAVGALMR--ELYPQ-----SALLLSSALLGGVGIGII  114 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchH-HHHHHHHHHHHHHHHH--HHCcc-----hHHHHHHHHHHHhHHHHH
Confidence            346788888999999999999999999999876 5556666655554432  22233     234667789999999999


Q ss_pred             hhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          236 NTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      +.....++.+.+|+++..+++.+......|..++-.+.+.+
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l  155 (393)
T PRK09705        115 QAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWL  155 (393)
T ss_pred             hhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987777899999988888998888887764

>PRK10091 MFS transport protein AraJ; Provisional

Probab=98.35  E-value=3.8e-05  Score=72.33  Aligned_cols=111  Identities=14%  Similarity=0.053  Sum_probs=81.9

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ..+|++...+.++..+++.+.|++.||++||+ .+.++.++.....++.  .+.++     ++..++..++.|++.+...
T Consensus        38 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~l~--~~~~~-----~~~l~~~r~l~G~~~~~~~  109 (382)
T PRK10091         38 PAAGHMISYYALGVVVGAPIIALFSSRYSLKH-ILLFLVALCVIGNAMF--TLSSS-----YLMLAIGRLVSGFPHGAFF  109 (382)
T ss_pred             HHHhHHHHHHHHHHHHHHHHHHHHHccCccHH-HHHHHHHHHHHHHHHH--HHhCc-----HHHHHHHHHHHHhhhHHHH
Confidence            46788999999999999999999999999775 5555655555444332  22222     3456777899999999888


Q ss_pred             hhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          237 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       237 t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      .....++.+.+++++ .++++.+....++|..++-.+...
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~  149 (382)
T PRK10091        110 GVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTY  149 (382)
T ss_pred             HHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHH
Confidence            888888888887643 568888888777877776555444

>PRK09848 glucuronide transporter; Provisional

Probab=98.34  E-value=0.0004  Score=66.88  Aligned_cols=106  Identities=13%  Similarity=0.040  Sum_probs=70.7

Q ss_pred             HHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhH
Q 021469          163 MAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSAL  242 (312)
Q Consensus       163 ~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i  242 (312)
                      +....++.++++.+.+++.||+++|+ .+.++.++...+.++..  +.++.+   .+..++..++.|++.+..+....++
T Consensus       270 ~~~~~~~~~~~~~l~~~l~~r~g~~~-~~~~g~~~~~i~~~~~~--~~~~~~---~~~~~~~~~l~g~G~~~~~~~~~al  343 (448)
T PRK09848        270 LVQNLVGTVASAPLVPGMVARIGKKN-TFLIGALLGTCGYLLFF--WVSVWS---LPVALVALAIASIGQGVTMTVMWAL  343 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHH--HcCchh---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33345667888999999999998765 44566655554444332  222211   2345556778899999988888888


Q ss_pred             HHHhccCC--------hhhhHHHHHHHHHHHHHHHHHhhh
Q 021469          243 LGILFKHD--------TEGAFAQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       243 ~g~~~~~~--------~~~afa~~~~~qs~g~ai~f~~~~  274 (312)
                      ..+.-|++        +..+++++.+.+.+|.+++-.+.+
T Consensus       344 ~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g  383 (448)
T PRK09848        344 EADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPA  383 (448)
T ss_pred             HHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            87765422        245688999999888888765543

>PRK12382 putative transporter; Provisional

Probab=98.34  E-value=2.6e-05  Score=73.52  Aligned_cols=120  Identities=17%  Similarity=0.065  Sum_probs=81.0

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHH-HHHhcccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL-WILINYSVTSGVLGTLYPLIMAALLGIGDGV  234 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~  234 (312)
                      ..++|.+..++.++..+++.+.|++.||++||+ ++..+.+....+.+ .......+..+..+.+..++..++.|++++.
T Consensus        50 ~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~  128 (392)
T PRK12382         50 NTMVGIAVGIQFLATVLTRGYAGRLADQYGAKR-SALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQ  128 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchH-HHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999876 44455444332211 1111111111111123467778899999998


Q ss_pred             HhhhhHhHHHHhcc-CChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          235 LNTQLSALLGILFK-HDTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       235 ~~t~~~~i~g~~~~-~~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ..+.....+.+..| |++.++++......+.|..++-.+.+.+
T Consensus       129 ~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l  171 (392)
T PRK12382        129 LLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLL  171 (392)
T ss_pred             HHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHH
Confidence            88777777777776 4456789888887777777777666544

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=98.33  E-value=6.5e-05  Score=70.81  Aligned_cols=261  Identities=11%  Similarity=0.040  Sum_probs=131.9

Q ss_pred             ceeechhhHHHHHHHHhHhhhhHHh--hHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccC-Ccccc-------cc
Q 021469           26 TVIGSFNGEFWGMFASHQFVGNLIT--LAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK-EEDKG-------EK   95 (312)
Q Consensus        26 ~~~g~~~gifw~i~~~s~iiG~li~--~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~-~~~~~-------~~   95 (312)
                      ++||+..++|-...|.|..+=.++.  ..+..+.+     -+..+|.-=.+..++|.++...+++ |+.+-       ++
T Consensus       149 ~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~-----w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~  223 (448)
T COG2271         149 KERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGG-----WRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRG  223 (448)
T ss_pred             cccCceEEEehhhhhcccchHHHHHHHHHHHhccc-----hhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhc
Confidence            5799999998888777765544444  22221111     1122332223333333333344443 43311       12


Q ss_pred             chhhc-c-h--hhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhH---hhhhhhcccccccccccccchhhHHHHHHhH
Q 021469           96 ETADA-S-V--NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQ---QAFVWAEFTKEIVTPALGVSGVGGAMAVYGA  168 (312)
Q Consensus        96 ~~~~~-~-~--~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~---~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~  168 (312)
                      |..+. + +  .+..+.||.+.  ...++||...++.....+.-+.   .--|.-.|-...  +-.+..........|=.
T Consensus       224 d~~e~~~~~~~~~~ls~~~i~~--~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~--k~~s~~~a~~a~~lfE~  299 (448)
T COG2271         224 DPLEIYEEEKENEGLTAWQIFV--KYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEV--KGFSLVKANWAISLFEV  299 (448)
T ss_pred             CchhhhhhhccCCCccHHHHHH--HHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh--cCCCHHHHHHHHHHHHH
Confidence            22111 1 1  11145566653  2368888876665544332221   111222222211  11233456677788899


Q ss_pred             HHHHHHHHHhhhhcCC--CChhhHHHHHHHHHHHHHHHHHhccc-CCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHH
Q 021469          169 FDAICSLAAGRLTTGL--PSITFIVSGGAIAQVVVFLWILINYS-VTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGI  245 (312)
Q Consensus       169 ~~~ig~~~~G~l~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~  245 (312)
                      +.+.|+++.|+++||.  +||.+.-++..+....+.+.   .|. |+.   .+.+..++.+..|+.-..=|..+-....+
T Consensus       300 agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~---~w~~~~~---~~~l~~~~l~~iGf~IyGPqmLiGl~a~e  373 (448)
T COG2271         300 AGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVL---YWLAPNG---SYLLDAILLFIIGFLIYGPQMLIGLAAAE  373 (448)
T ss_pred             HhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH---HHcCCCc---cHHHHHHHHHHHHHHHhhHHHHHHHHHhc
Confidence            9999999999999985  45654433332222222221   232 221   12445666677777666666554444444


Q ss_pred             hccCCh-hhhHHHHHHHHHH-HHHHHHHhhhhh----hHHHHHHHHHHHHHHHHHHHHHhhh
Q 021469          246 LFKHDT-EGAFAQLKVWQCA-SIAVVFFIGPYI----SLQAMLIVMVVGICVALVGILFLTI  301 (312)
Q Consensus       246 ~~~~~~-~~afa~~~~~qs~-g~ai~f~~~~~l----~~~~~~~il~~~~~~~~~~~~~~~~  301 (312)
                      .-|++. ..|-+.-.++..+ |.+.+-..-+.+    ....-++++.+..+++.+.+..+-.
T Consensus       374 ~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~  435 (448)
T COG2271         374 FVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWN  435 (448)
T ss_pred             cccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence            446554 4678888888888 666554443333    2234455555555555555555443

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=98.32  E-value=0.00091  Score=63.06  Aligned_cols=239  Identities=17%  Similarity=0.141  Sum_probs=137.2

Q ss_pred             cCCCcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHH-hccCCccccccchh
Q 021469           20 HKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC-FLRKEEDKGEKETA   98 (312)
Q Consensus        20 ~~~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~l-fL~~~~~~~~~~~~   98 (312)
                      .|..+|++|+|-.++-|.+.-.|.++++++...++...++      ..+.-++-..+.+...+.+ -+-+.|+..++.. 
T Consensus       115 ~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~------~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~-  187 (403)
T PF03209_consen  115 ADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSP------ERLIQVIQGVALIALLLNLIALWGQEPRRSRRA-  187 (403)
T ss_pred             HhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCH------HHHHHHHHHHHHHHHHHHHHHHHhcccCCcccc-
Confidence            3456789999999999999999999999998877765332      1233333333333333221 1212222211111 


Q ss_pred             hcchhhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhh-hcccccccccccc--cchhhHHHHHHhHHHHHHHH
Q 021469           99 DASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVW-AEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSL  175 (312)
Q Consensus        99 ~~~~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~-~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~  175 (312)
                      +.+++++.++++..++.+   .||+...+.- +...+.. +|.. ...-+=|....+|  ..+..-.....+.+..+|=.
T Consensus       188 ~~~~~~~~~f~~a~~~~~---~~~~a~~f~~-fl~l~t~-a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~  262 (403)
T PF03209_consen  188 AAAERPRPPFREAWRQVW---ASPQARRFFV-FLFLGTL-AFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGML  262 (403)
T ss_pred             cCCCCCCccHHHHHHHHH---hCCChhHHHH-HHHHHHH-HHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence            111223445666655444   5666544442 3333322 2221 1111112122222  23344455567777777777


Q ss_pred             HHhhhhc-CCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhcc-CChhh
Q 021469          176 AAGRLTT-GLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFK-HDTEG  253 (312)
Q Consensus       176 ~~G~l~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~-~~~~~  253 (312)
                      +.|++.. |.++++ ...+++.....++.++...-+.++    +++.....+++|++.+.+.+-.-+..-++-+ ++...
T Consensus       263 ~~g~~l~~~~~~~~-~a~~G~~~~~~~f~lii~a~~~~~----~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~  337 (403)
T PF03209_consen  263 LAGFLLSRRLGKKR-TAALGCLLGALAFALIILAGPLGS----PWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGL  337 (403)
T ss_pred             HHHHHhcCCCCchH-HHHHHHHHHHHHHHHHHHHHhccc----chHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhH
Confidence            8888876 444443 445666666666665433221121    2456677899999999998877766666654 45567


Q ss_pred             hHHHHHHHHHHHHHHHHHhhhh
Q 021469          254 AFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       254 afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      ..+.+-..|+++..++-+.+..
T Consensus       338 ~mG~WGaaQA~A~Glg~~~GG~  359 (403)
T PF03209_consen  338 FMGAWGAAQAIARGLGTFLGGA  359 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999888887663

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>PRK10489 enterobactin exporter EntS; Provisional

Probab=98.32  E-value=2e-05  Score=75.10  Aligned_cols=116  Identities=14%  Similarity=0.024  Sum_probs=80.9

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHh-cccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      .++|.+...+.++..+++.+.|++.||++||+ ++..+.++....+.+... .+...+   +.+..++..++.|++.+..
T Consensus        52 ~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~-~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~g~~~~~~  127 (417)
T PRK10489         52 LQVGLSVTLTGGAMFIGLMVGGVLADRYDRKK-LILLARGTCGLGFIGLALNAFLPEP---SLLAIYLLGLWDGFFGSLG  127 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHhhhcCCce-EEEehHHHHHHHHHHHHHHHHcCCC---cHHHHHHHHHHHHHHHHHH
Confidence            46799999999999999999999999998775 333444443333322211 111111   1234566778888988888


Q ss_pred             hhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          236 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ......++.+..|++ ..++.++.....++|..++-.+...+
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l  169 (417)
T PRK10489        128 VTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLL  169 (417)
T ss_pred             HHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHH
Confidence            788888888888654 36788888888888888888777653

>PRK03545 putative arabinose transporter; Provisional

Probab=98.32  E-value=5.1e-05  Score=71.56  Aligned_cols=113  Identities=14%  Similarity=0.107  Sum_probs=84.6

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      ..++|++...+.++..+++...|.+.||++||+ ++..+.++...+.++..  +.++     .+..++..++.|++.+..
T Consensus        43 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~~--~~~~-----~~~l~~~r~~~G~~~~~~  114 (390)
T PRK03545         43 TAQVGLMLTIYAWVVALMSLPLMLLTSNVERRK-LLIGLFVLFIASHVLSA--LAWN-----FTVLLISRIGIAFAHAIF  114 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH-HHHHHHHHHHHHHHHHH--Hhcc-----HHHHHHHHHHHHHHHHHH
Confidence            457888888999999999999999999999876 55555555444433222  2222     244666778899999988


Q ss_pred             hhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          236 NTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       236 ~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      .+....++.+.+|+ ++.+++++.....++|.+++-.+...+
T Consensus       115 ~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l  156 (390)
T PRK03545        115 WSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVI  156 (390)
T ss_pred             HHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHH
Confidence            88888899988864 556899999999999988887776643

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=98.30  E-value=0.00013  Score=70.33  Aligned_cols=242  Identities=17%  Similarity=0.178  Sum_probs=138.9

Q ss_pred             ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccch----hhcc
Q 021469           26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKET----ADAS  101 (312)
Q Consensus        26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~----~~~~  101 (312)
                      +.+|...+..|.....+.++|+.++-.+....+      .+..|.+...+..+..+..+++.+..++.+.++    .+++
T Consensus       120 ~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~------~~~~f~i~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~  193 (433)
T PF03092_consen  120 ESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG------PQGVFLISAALPLLMLIVALFLLEERKVRPADEVFSFGKEE  193 (433)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC------CeEEehHHHHHHHHHHHHHHHhhhhccccccchhhcccccc
Confidence            348999999999999999999988866554332      133556666666666555655544322221111    0111


Q ss_pred             hhh-hhHHHHHHHHHHHhhcChhhHHHHH-HHHhhhhHhhhhhh-cccccccccccc-----cchhhHHHHHHhHHHHHH
Q 021469          102 VNF-YSYLVSLSKSITTLLADVRMLLIIP-LFAYSGLQQAFVWA-EFTKEIVTPALG-----VSGVGGAMAVYGAFDAIC  173 (312)
Q Consensus       102 ~~~-~~s~~~~~~~~~~~~~~~~~lll~p-~~~~~G~~~~f~~~-~~~~~~~s~~lg-----~~~~g~v~~~~g~~~~ig  173 (312)
                      .+. ....++..++.++.++.+.+...+- +.+........-.+ .+.  +.++..+     ....|.+-++.+++..+|
T Consensus       194 ~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy--~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g  271 (433)
T PF03092_consen  194 VPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFY--FQTDALGGPHFSPSFYGTLSIVGSIASLLG  271 (433)
T ss_pred             cchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEE--EEeccccccccCHHHHHHHHHHHHHHHHHH
Confidence            111 2237899999999999988754443 22222222221112 111  0112222     234566666677777788


Q ss_pred             HHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHh---cccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC
Q 021469          174 SLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI---NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD  250 (312)
Q Consensus       174 ~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~  250 (312)
                      ..+..+...+.+-|+ ++....++.....+.-.+   .|..+-...|.++.+.-.++..+....-..-...+++++-|+.
T Consensus       272 ~~~y~~~~~~~~~R~-~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G  350 (433)
T PF03092_consen  272 ILLYRKYFSNWSWRR-IFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKG  350 (433)
T ss_pred             HHHHHHHHhCCCHHH-HHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            888877766554343 444444333322221111   1211111122244555667777777776677777888888876


Q ss_pred             hh-hhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          251 TE-GAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       251 ~~-~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      .| ..||+.-.+.++|..++..++..+
T Consensus       351 ~Egt~yall~s~~Nlg~~~s~~lg~~l  377 (433)
T PF03092_consen  351 SEGTVYALLASFSNLGSSVSSTLGAFL  377 (433)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            65 679999888888888888887754

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=98.30  E-value=6.6e-05  Score=76.83  Aligned_cols=109  Identities=11%  Similarity=-0.015  Sum_probs=80.9

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ...+++...+.++.++|+++.|.+.||+|||+ .++++.++..++.++..  +.++     .+..++.-++.|++-+...
T Consensus       202 ~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~-~lii~lil~~i~~ll~a--fa~s-----~~~llv~R~l~G~g~g~~~  273 (742)
T TIGR01299       202 SGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQ-CLLICLSVNGFFAFFSS--FVQG-----YGFFLFCRLLSGFGIGGAI  273 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHH--HHhh-----HHHHHHHHHHHHHHHHHHH
Confidence            46788888899999999999999999999876 44444444433322221  2222     2346677889999999999


Q ss_pred             hhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhh
Q 021469          237 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIG  273 (312)
Q Consensus       237 t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~  273 (312)
                      ...+.++.+.+|.+ +..+.+....+.++|..++..+.
T Consensus       274 p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la  311 (742)
T TIGR01299       274 PIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMA  311 (742)
T ss_pred             HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999854 45788899999888888877654

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=98.29  E-value=4.8e-05  Score=72.18  Aligned_cols=109  Identities=15%  Similarity=0.152  Sum_probs=83.2

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ..++.+...+.+..++.+.+.|++.||++||+ ++..+.++.....+...  +.++        ..+..++.|++++...
T Consensus        38 ~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~-vl~~~~~~~~~~~~~~~--~~~~--------~~~~r~l~G~~~a~~~  106 (393)
T PRK11195         38 WSQPLLQMFFVLAYIVLAPFVGAFADSFPKGR-VMFIANGIKLLGCLLML--FGIH--------PLLAYGLVGIGAAAYS  106 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhHhhhccCCch-hhHHHHHHHHHHHHHHH--HHHH--------HHHHHHHHHHHHHHHH
Confidence            45788888999999999999999999999876 55555555443322211  1112        2455678899999999


Q ss_pred             hhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          237 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       237 t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ....+++.+.+|+++ .++.++.....++|..++-.+.+.+
T Consensus       107 pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l  147 (393)
T PRK11195        107 PAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGAL  147 (393)
T ss_pred             HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998554 6899999999999988888887765

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=98.29  E-value=6.5e-05  Score=71.28  Aligned_cols=112  Identities=15%  Similarity=0.090  Sum_probs=86.0

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      +++|..+..+.++..+++.+.|.+.||++||+ ++..+.++.....++..  +.++     .+..++..++.|++.+...
T Consensus        55 ~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~-~~~~~~~~~~~~~~~~~--~~~~-----~~~l~~~r~l~G~~~g~~~  126 (394)
T PRK10213         55 GVAGQSVTVTAFVAMFASLFITQTIQATDRRY-VVILFAVLLTLSCLLVS--FANS-----FSLLLIGRACLGLALGGFW  126 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCcHH-HHHHHHHHHHHHHHHHH--HHCh-----HHHHHHHHHHHHHhhHHHH
Confidence            56788888899999999999999999999775 55566666554443322  2222     3457778899999999988


Q ss_pred             hhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          237 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       237 t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      .....++.+.+|++ +..+.+......++|..++-.+.+.+
T Consensus       127 ~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l  167 (394)
T PRK10213        127 AMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFL  167 (394)
T ss_pred             HHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88899999999754 46788888888888888887777754

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=98.28  E-value=3e-05  Score=76.47  Aligned_cols=176  Identities=16%  Similarity=0.125  Sum_probs=108.3

Q ss_pred             HHHhhcChhhHHHHHHHHhhhhHhhhhhhccccccc-ccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHH
Q 021469          115 ITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSG  193 (312)
Q Consensus       115 ~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~-s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~  193 (312)
                      .+..+++|.++.+.---..+.+....+.-..+ -++ +.+-....++.+.++..+-..+.+.+.|.+.||++||+ +++.
T Consensus         3 ~~aplr~~~Fr~lw~a~~iS~lG~~~~~va~~-wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrr-ili~   80 (524)
T PF05977_consen    3 AFAPLRNRNFRRLWIAQLISNLGDWMQTVALA-WLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRR-ILIL   80 (524)
T ss_pred             CcccccCchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH-HHHH
Confidence            35567777776665555554443333211000 000 10101235778888888888999999999999999876 4444


Q ss_pred             HHHHHHHH-HHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHH
Q 021469          194 GAIAQVVV-FLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFF  271 (312)
Q Consensus       194 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~  271 (312)
                      +-++.... .++..+.+-.   ..+++..+++.++.|++++..+...++++.++.|+++ .++.++.....+++..++-.
T Consensus        81 ~~~~~~~~~~~L~~l~~~~---~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPa  157 (524)
T PF05977_consen   81 SQLLRALVALLLAVLAFFG---LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPA  157 (524)
T ss_pred             HHHHHHHHHHHHHHHHHhC---cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccch
Confidence            44433322 2222211111   1124567889999999999999999999999998655 57888888888887777776


Q ss_pred             hhhhh----hHHHHHHHHHHHHHHHHHH
Q 021469          272 IGPYI----SLQAMLIVMVVGICVALVG  295 (312)
Q Consensus       272 ~~~~l----~~~~~~~il~~~~~~~~~~  295 (312)
                      +.+.+    ....-+.+..+..+++...
T Consensus       158 lgG~Lva~~G~~~~f~inalsfl~~i~~  185 (524)
T PF05977_consen  158 LGGILVAFFGAAAAFLINALSFLISILA  185 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            66643    3444455555444444433

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=98.27  E-value=6.3e-05  Score=70.90  Aligned_cols=111  Identities=21%  Similarity=0.154  Sum_probs=81.6

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ..++.+..++.++..++..+.|++.||++||+ .+.++.++.........  +.++     .+..++..++.|++.+...
T Consensus        38 ~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~-~l~~~~~~~~i~~~~~~--~~~~-----~~~~~~~~~l~g~~~~~~~  109 (392)
T PRK10473         38 AQLHIAFSVYLAGMAAAMLFAGKIADRSGRKP-VAIPGAALFIIASLLCS--LAET-----SSLFLAGRFLQGIGAGCCY  109 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhHHHHHhCChH-HHHHHHHHHHHHHHHHH--HhCc-----HHHHHHHHHHHHhhhhHHH
Confidence            45788888899999999999999999999775 55566555544443322  2222     2345667788999999888


Q ss_pred             hhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          237 TQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       237 t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      ...+.++.+.+|+ ++.++.+......++|..++-.+...
T Consensus       110 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~  149 (392)
T PRK10473        110 VVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHL  149 (392)
T ss_pred             HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8889999998864 44678888888888887776666554

>TIGR00896 CynX cyanate transporter

Probab=98.27  E-value=5.1e-05  Score=70.49  Aligned_cols=112  Identities=17%  Similarity=0.053  Sum_probs=84.1

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      .+++|+....+.++..+++.+.|++.||+++|+ .+.++.++...+....   ..++     ++..++..++.|++.+..
T Consensus        34 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~---~~~~-----~~~l~~~~~~~g~g~~~~  104 (355)
T TIGR00896        34 FSVAGLLTALPVLCFAVLAPLAPWLARRFGEER-SVAAGLLLIAAGILIR---SAPG-----TALLFAGTALIGVGIAII  104 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchH-HHHHHHHHHHHHHHHH---Hhcc-----HHHHHHHHHHHHHHHHHH
Confidence            356788888999999999999999999999776 4445554443333221   2122     234567778889999888


Q ss_pred             hhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          236 NTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      +.....++.+.+++++..+++.+...+++|..++-.+.+.+
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l  145 (355)
T TIGR00896       105 NVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPL  145 (355)
T ss_pred             hccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88888888888887777899999999999998887766543

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=98.26  E-value=4.5e-05  Score=69.55  Aligned_cols=113  Identities=19%  Similarity=0.205  Sum_probs=88.7

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      ..+.+.+...+.++..+++.+.|++.||++||+ .+..+.++..........  .++     .+..++..++.|++.+..
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~-~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~l~g~~~~~~  104 (352)
T cd06174          33 ASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRR-VLLLGLLLFALGSLLLAF--ASS-----LWLLLVGRFLLGLGGGAL  104 (352)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCch-hhHHHHHHHHHHHHHHHH--hcc-----HHHHHHHHHHHHcccccc
Confidence            356788888999999999999999999999776 555666555544443221  122     245778889999999999


Q ss_pred             hhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          236 NTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       236 ~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ......++.+.+|+ ++..+++..+...++|..++..+...+
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  146 (352)
T cd06174         105 YPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLL  146 (352)
T ss_pred             cHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999986 556899999999999999998887764

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=98.26  E-value=2e-05  Score=61.92  Aligned_cols=104  Identities=16%  Similarity=0.091  Sum_probs=76.8

Q ss_pred             HHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHH
Q 021469          165 VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLG  244 (312)
Q Consensus       165 ~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g  244 (312)
                      .+++++.+++.+.|++.||++||+ .+..+..+.........  +.++     .+...+..++.|++.+..+...+..+.
T Consensus         6 ~~~~~~~~~~~~~g~~~d~~g~~~-~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~   77 (141)
T TIGR00880         6 GYALGQLIYSPLSGLLTDRFGRKP-VLLVGLFIFVLSTAMFA--LSSN-----ITVLIIARFLQGFGAAFALVAGAALIA   77 (141)
T ss_pred             eehhHHHHHHhhHHHHHhhcchhH-HHHHHHHHHHHHHHHHH--Hhcc-----HHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            467788999999999999998776 44444444443333221  2222     245667789999999999999999999


Q ss_pred             HhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          245 ILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       245 ~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      +.+|++ +.++.+..+....+|..++-.+.+.+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  110 (141)
T TIGR00880        78 DIYPPEERGVALGLMSAGIALGPLLGPPLGGVL  110 (141)
T ss_pred             HHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHH
Confidence            988754 46789999999999999988887765

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=98.25  E-value=8.4e-05  Score=71.04  Aligned_cols=146  Identities=12%  Similarity=0.033  Sum_probs=97.5

Q ss_pred             HHHHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHH
Q 021469          126 LIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI  205 (312)
Q Consensus       126 ll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~  205 (312)
                      .+.-.++..|+..+...-..+..-....+...+.|.+...+.++..+++...|++.||++||+ .+.++.++...+..+.
T Consensus         7 ~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~-~~~~g~~l~~~g~~l~   85 (410)
T TIGR00885         7 LITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKA-GILLGLFLYALGAFLF   85 (410)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchH-HHHHHHHHHHHHHHHH
Confidence            344455556665555433222111011123356899999999999999999999999999775 5556666655443332


Q ss_pred             HhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          206 LINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ... ...+   +.+..++..++.|++.+..++..+..+....|++ +.+..++.+..+++|..++-.+.+.+
T Consensus        86 ~~~-~~~~---~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l  153 (410)
T TIGR00885        86 WPA-AEIM---NYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQL  153 (410)
T ss_pred             HHH-Hhhc---cHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            111 1111   1234567778889999999999888888877654 46789999999999999998876643

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=98.24  E-value=6.6e-05  Score=73.36  Aligned_cols=136  Identities=17%  Similarity=0.209  Sum_probs=88.9

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCC-CChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGL-PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      ...+.++..+.....++.+++|++.||+ |||+ .+.++.++......++  ..+++.    +...++...+..++.+..
T Consensus        45 ~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr-~iliG~il~~lg~lll--~~~~~~----~~~~~l~l~li~iG~G~~  117 (493)
T PRK15462         45 NHAYELFSAYCSLVYVTPILGGFLADKVLGNRM-AVMLGALLMAIGHVVL--GASEIH----PSFLYLSLAIIVCGYGLF  117 (493)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHH-HHHHHHHHHHHHHHHH--HHhhcc----hhHHHHHHHHHHHhcccc
Confidence            4566777888888999999999999998 8776 4556666655443322  121111    122333334455666777


Q ss_pred             hhhhHhHHHHhccCC---hhhhHHHHHHHHHHHHHHHHHhhhhhh--HHHH--HHHHHHHHHHHHHHHHHh
Q 021469          236 NTQLSALLGILFKHD---TEGAFAQLKVWQCASIAVVFFIGPYIS--LQAM--LIVMVVGICVALVGILFL  299 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~---~~~afa~~~~~qs~g~ai~f~~~~~l~--~~~~--~~il~~~~~~~~~~~~~~  299 (312)
                      ....++++++.||++   +..+++++....++|..++-.+.+.+.  ..++  +.+..+..+++++.+...
T Consensus       118 ~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~  188 (493)
T PRK15462        118 KSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCG  188 (493)
T ss_pred             cccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHh
Confidence            777888999999753   456899999999999999988887753  2233  333333445555555443

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=98.23  E-value=8.5e-05  Score=70.40  Aligned_cols=111  Identities=16%  Similarity=0.079  Sum_probs=77.7

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ..++.....+.++..+++.+.|.+.||++||+ ++.++..+...+.....  +.++     .+..++..++.|++.+...
T Consensus        48 ~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~-~l~~~~~~~~~~~~~~~--~~~~-----~~~l~~~~~l~G~~~~~~~  119 (406)
T PRK15402         48 EWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRP-VMLAGVAFFILTCLAIL--LAQS-----IEQFTLLRFLQGIGLCFIG  119 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHHH--HHcc-----HHHHHHHHHHHHhHhhhHH
Confidence            46788888999999999999999999999876 44555544444433222  2222     2345677888899999888


Q ss_pred             hhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          237 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       237 t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      ...+..+.+.+|+++ .++.+.......+|..++-.+...
T Consensus       120 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~  159 (406)
T PRK15402        120 AVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAA  159 (406)
T ss_pred             HHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            888888888887655 456777766666666665555443

>PRK11663 regulatory protein UhpC; Provisional

Probab=98.22  E-value=9.3e-05  Score=71.06  Aligned_cols=112  Identities=13%  Similarity=0.105  Sum_probs=81.5

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ..+|++...+.++.++++.+.|++.||+++|+ ++.++.++...+..+.  .+.++     ++..++..++.|++.+...
T Consensus        58 ~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~-~~~~~~~~~~~~~~~~--~~~~~-----~~~l~~~~~l~g~~~g~~~  129 (434)
T PRK11663         58 SDIGLLATLFYITYGVSKFVSGIVSDRSNARY-FMGIGLIATGIINILF--GFSSS-----LWAFALLWVLNAFFQGWGW  129 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHHhhcCCch-hHHHHHHHHHHHHHHH--HHHhH-----HHHHHHHHHHHHHHHHccc
Confidence            46788889999999999999999999999775 4455555544433322  12222     2334555667788888777


Q ss_pred             hhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          237 TQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       237 t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      .....++.+.+++ ++..+++++...+++|..++-.+.+.+
T Consensus       130 ~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l  170 (434)
T PRK11663        130 PVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAI  170 (434)
T ss_pred             hHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7778888998875 457889999999999999887665543

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=98.21  E-value=3e-05  Score=71.59  Aligned_cols=107  Identities=12%  Similarity=-0.043  Sum_probs=78.7

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      ..++|.+...+.++..+++.+.|++.||++||+ .+.++.++.....+...  ..++     .+..++..++.|++.+..
T Consensus        37 ~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~-~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~g~~~~~~  108 (377)
T TIGR00890        37 VTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRA-VAMLGGILYGLGFTFYA--IADS-----LAALYLTYGLASAGVGIA  108 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccc-hhHHhHHHHHHHHHHHH--HHHH-----HHHHHHHHHHHhHHHHHH
Confidence            356788999999999999999999999999876 44455555444433221  2222     234566777899999887


Q ss_pred             hhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHH
Q 021469          236 NTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVF  270 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f  270 (312)
                      .......+.+.+|+++..+.++.....++|..++-
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  143 (377)
T TIGR00890       109 YGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILS  143 (377)
T ss_pred             HHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHH
Confidence            77777788888888877889999888888876543

>PRK03633 putative MFS family transporter protein; Provisional

Probab=98.21  E-value=4e-05  Score=72.08  Aligned_cols=113  Identities=12%  Similarity=-0.027  Sum_probs=84.1

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      ...+|.++..+.++..+++.+.|++.||++||+ .+..+.++......+.  .+.++     .+..++..++.|++.+..
T Consensus        40 ~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~-~~~~~~~~~~~~~~~~--~~~~~-----~~~l~~~~~l~G~~~~~~  111 (381)
T PRK03633         40 TWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNR-SYYLASLIFAAGCAGL--GLMVG-----FWSWLAWRFVAGIGCAMI  111 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHH--HHhcc-----HHHHHHHHHHHHHHHHHH
Confidence            357899999999999999999999999998765 4445555554443332  22222     244567788999999888


Q ss_pred             hhhhHhHHHHhcc-CChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          236 NTQLSALLGILFK-HDTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       236 ~t~~~~i~g~~~~-~~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      .......+.+..+ +++.++++.+....++|.+++-.+.+.+
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l  153 (381)
T PRK03633        112 WVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKV  153 (381)
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            7777666666665 4456899999999999999988887764

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=98.21  E-value=5e-05  Score=81.42  Aligned_cols=114  Identities=14%  Similarity=0.081  Sum_probs=84.4

Q ss_pred             hhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHh-cccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          158 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       158 ~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ..+.+..++.++.++++.+.|++.||++||+ +++++.++..+..++... ...++     .+..++..++.|++.+...
T Consensus        48 ~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~-~l~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~r~l~G~~~~~~~  121 (1146)
T PRK08633         48 LTAIVNALFLLPFLLLSSPAGFLADKFSKNR-VIRIVKLFEVGLTLLIVLAYYLGW-----FWLAFAVTFLLGAQSAIYS  121 (1146)
T ss_pred             HHHHHHHHHHHHHHHHhhhHhhhcccccHHH-HHHHHHHHHHHHHHHHHHHHHHcc-----HHHHHHHHHHHHHHHHhhc
Confidence            3577778888899999999999999999775 444444433322222111 11111     2457778899999999999


Q ss_pred             hhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhhh
Q 021469          237 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS  277 (312)
Q Consensus       237 t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l~  277 (312)
                      ...++++.+.++++ ...++++.....++|..++..+.+.+.
T Consensus       122 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~  163 (1146)
T PRK08633        122 PAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLF  163 (1146)
T ss_pred             hHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999754 468999999999999999988887653

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=98.21  E-value=1.5e-05  Score=75.35  Aligned_cols=119  Identities=10%  Similarity=0.120  Sum_probs=73.1

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHH-HHHhcccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL-WILINYSVTSGVLGTLYPLIMAALLGIGDGV  234 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~  234 (312)
                      ...+|.++..+.++..+++.+.|++.||++||+.+. .+.+....... .....+.+...........+..++.|++.+.
T Consensus        37 ~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  115 (396)
T TIGR00882        37 KTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLL-WIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSA  115 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH-HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence            356889999999999999999999999999876443 22222221111 1111111110000011234446777887777


Q ss_pred             HhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          235 LNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       235 ~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ..........+.-++ +...++..|...++|.+++-.+.+.+
T Consensus       116 ~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~g~~~~g~l  156 (396)
T TIGR00882       116 GAGAIEAYIEKVSRN-SNFEYGKARMFGCVGWALCASIAGIL  156 (396)
T ss_pred             chhhHHHHHHHhhhh-cccccchhhhhcccHHHHHHHHHhhh
Confidence            666666555443222 23478899999999999988887754

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=98.21  E-value=6.2e-05  Score=70.25  Aligned_cols=112  Identities=15%  Similarity=0.174  Sum_probs=84.0

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      .+++++...+.++..+++.+.|++.||++||+ .+..+.++.........  +.++     .+...+..++.|++.+...
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~i~~~~~~--~~~~-----~~~~~~~~~l~g~~~~~~~   97 (377)
T PRK11102         26 GSVQMTLSAYILGFAIGQLFYGPMADSFGRKP-VILGGTLVFALAAVACA--LAQT-----IDQLIYMRFLHGLAAAAAS   97 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhchHHhhcCChH-HHHHHHHHHHHHHHHHH--HHcc-----HHHHHHHHHHHHHHHHHHH
Confidence            56788888999999999999999999999765 55555555544433222  2222     2346677889999999988


Q ss_pred             hhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          237 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       237 t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      .....++.+.+|++ +.+++++......+|..++-.+...+
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l  138 (377)
T PRK11102         98 VVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWL  138 (377)
T ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88899999988754 46789999888888888877776654

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=98.20  E-value=0.00048  Score=67.10  Aligned_cols=247  Identities=13%  Similarity=0.072  Sum_probs=130.1

Q ss_pred             eechhhHHHHHHHHhHhhhhHHhhHhhcCC------CCcCC---CCchhhHHHHHHHHHHHHHHH-HhccCCccccccch
Q 021469           28 IGSFNGEFWGMFASHQFVGNLITLAVLKDD------KGGST---SGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKET   97 (312)
Q Consensus        28 ~g~~~gifw~i~~~s~iiG~li~~~~~~~~------~~~~~---~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~   97 (312)
                      .++.++++-...++|.++|+++..+.....      ++...   ...+..|.+=.++.++...+. ++.++.+..+++|.
T Consensus       150 ~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~  229 (477)
T TIGR01301       150 TRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDF  229 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccc
Confidence            467888888888999999998876642110      00000   012334433333333333333 33443221111110


Q ss_pred             --hh----cchhhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhh-hhccc-ccc-c-cc---cc---ccchhhH
Q 021469           98 --AD----ASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFV-WAEFT-KEI-V-TP---AL---GVSGVGG  161 (312)
Q Consensus        98 --~~----~~~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~-~~~~~-~~~-~-s~---~l---g~~~~g~  161 (312)
                        ++    .+.+....++|.+++..++=+.-+.+++.=++-+.|++--.. .+++- +.+ . .+   ..   |...-.+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~  309 (477)
T TIGR01301       230 INSEAAPPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAF  309 (477)
T ss_pred             hhhhcccccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHH
Confidence              00    011112234444444444444445566666666667642222 11110 000 0 00   00   1111235


Q ss_pred             HHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHH-hc-cc----C-CCCC---CCc----hHHHHHHHH
Q 021469          162 AMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL-IN-YS----V-TSGV---LGT----LYPLIMAAL  227 (312)
Q Consensus       162 v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~----~-~~~~---~~~----~~~~~~~~l  227 (312)
                      .+.++++...+.+++.-++.+|+++|+....++.++...++...+ +. ++    + ++++   .++    +..+++..+
T Consensus       310 ~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  389 (477)
T TIGR01301       310 GLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAI  389 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHH
Confidence            667788888888888888888887544344455444444444332 22 11    1 1110   111    457889999


Q ss_pred             HHhhhhHHhhhhHhHHHHhccC---ChhhhHHHHHHHHHHHHHHHHHhhh
Q 021469          228 LGIGDGVLNTQLSALLGILFKH---DTEGAFAQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       228 ~G~~d~~~~t~~~~i~g~~~~~---~~~~afa~~~~~qs~g~ai~f~~~~  274 (312)
                      .|+.-+..++..|+++++.-++   +.....+++|..-.+.+-+.-...+
T Consensus       390 ~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g  439 (477)
T TIGR01301       390 LGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSG  439 (477)
T ss_pred             hhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999998773   2246788888888877777665444

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=98.20  E-value=7.9e-05  Score=70.84  Aligned_cols=113  Identities=14%  Similarity=0.214  Sum_probs=87.1

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      ...+|+++.++.+...+.+.+.|++.||++||+ ++..+.++.........  +.++     ++..++..+++|++.+..
T Consensus        45 ~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~-~l~~~~~~~~~~~~~~~--~~~~-----~~~l~~~~~l~g~~~~~~  116 (400)
T PRK11646         45 AVMVGIALGLRQFIQQGLGIFGGAIADRFGAKP-MIVTGMLMRAAGFATMA--IAHE-----PWLLWLSCILSGLGGTLF  116 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchH-HHHHHHHHHHHHHHHHH--Hhcc-----HHHHHHHHHHHHHHHHHH
Confidence            356888998899999999999999999999765 55556655555444332  2222     345677788999999888


Q ss_pred             hhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          236 NTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       236 ~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      +....+++.+.+|+ ++.++.++.+...++|..++-.+.+.+
T Consensus       117 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l  158 (400)
T PRK11646        117 DPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWL  158 (400)
T ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88888889888864 456899999999999999998887765

>PRK10133 L-fucose transporter; Provisional

Probab=98.20  E-value=0.00015  Score=69.96  Aligned_cols=113  Identities=12%  Similarity=0.049  Sum_probs=84.4

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHh-cccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGV  234 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~d~~  234 (312)
                      ..+.|..+..+.++..+++.+.|++.||++||+ ++..+.++...+.++... ...++     .+..++.-++.|++.+.
T Consensus        60 ~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~-~l~~g~~~~~~~~~l~~~~~~a~~-----~~~ll~~r~l~G~g~g~  133 (438)
T PRK10133         60 NFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKA-GIITGLFLYALGAALFWPAAEIMN-----YTLFLVGLFIIAAGLGC  133 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999875 555666666555433211 12222     23456778888999999


Q ss_pred             HhhhhHhHHHHhccCChh-hhHHHHHHHHHHHHHHHHHhhh
Q 021469          235 LNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       235 ~~t~~~~i~g~~~~~~~~-~afa~~~~~qs~g~ai~f~~~~  274 (312)
                      .++..+.++.+..++++. ...+.++...++|.+++-.+.+
T Consensus       134 ~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~  174 (438)
T PRK10133        134 LETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQ  174 (438)
T ss_pred             HHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999988876555443 3588999999999999987754

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=98.19  E-value=7.1e-05  Score=71.46  Aligned_cols=113  Identities=14%  Similarity=0.149  Sum_probs=85.9

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      ..++|.+...+.++..++++..|++.||++||+ ++..+.++......+.  .+.++     ++..++.-++.|++.+..
T Consensus        42 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~-~~~~~~~~~~~~~~~~--~~~~~-----~~~l~~~r~l~G~~~~~~  113 (412)
T TIGR02332        42 ATMFGLAATLFYAAYVICGIPSNIMLAIIGARR-WIAGIMVLWGIASTAT--MFATG-----PESLYLLRILVGIAEAGF  113 (412)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHH-HHHHHHHHHHHHHHHH--HHhcC-----HHHHHHHHHHHHHHHhhH
Confidence            456889999999999999999999999999776 5455555554443332  22222     234667788999999998


Q ss_pred             hhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          236 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ......++.+.+|++ +..+.+++....++|..++..+.+.+
T Consensus       114 ~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l  155 (412)
T TIGR02332       114 LPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYI  155 (412)
T ss_pred             HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            888888889989854 56899999999999999888876643

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>TIGR00891 2A0112 putative sialic acid transporter

Probab=98.18  E-value=0.00012  Score=68.51  Aligned_cols=112  Identities=11%  Similarity=-0.048  Sum_probs=83.9

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      .++|++...+.++..+++.+.|.+.||++||+ .+.++.++...+.++..  +.++     ++..++..++.|++.+...
T Consensus        47 ~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~-~~~~~~~~~~~~~~~~~--~~~~-----~~~l~~~~~l~G~~~~~~~  118 (405)
T TIGR00891        47 VDAASLISAALISRWFGALMFGLWGDRYGRRL-PMVTSIVLFSAGTLACG--FAPG-----YITMFIARLVIGIGMGGEY  118 (405)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHH--Hhcc-----HHHHHHHHHHHHhhhhhhh
Confidence            56788888999999999999999999999876 44455555444333222  2122     2446778899999999988


Q ss_pred             hhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          237 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       237 t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      .....++.+.+|++ +..+.++......+|..++-.+...+
T Consensus       119 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l  159 (405)
T TIGR00891       119 GSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLV  159 (405)
T ss_pred             HHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88888888888754 46789999998888888887776653

>TIGR00806 rfc RFC reduced folate carrier

Probab=98.18  E-value=0.00011  Score=70.92  Aligned_cols=230  Identities=13%  Similarity=0.020  Sum_probs=134.3

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccc----ccc-----
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK----GEK-----   95 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~----~~~-----   95 (312)
                      +++|+|.+|++-+...+|.++|+++.-.+... +  .. ....+..+=++..+++.++++|||.|++.    +++     
T Consensus       145 ~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~-g--Wr-~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~  220 (511)
T TIGR00806       145 PSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTL-G--WI-SYSTLNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGA  220 (511)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-C--ch-hHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhccccccccc
Confidence            46899999999999999999999887664322 1  11 12334444456688889999999977662    010     


Q ss_pred             ---c-hhhcch--------hh---hhHHHHHHHHHHHhhcChhhHHHHHH--HHhhhh------Hhhhhhhccccccccc
Q 021469           96 ---E-TADASV--------NF---YSYLVSLSKSITTLLADVRMLLIIPL--FAYSGL------QQAFVWAEFTKEIVTP  152 (312)
Q Consensus        96 ---~-~~~~~~--------~~---~~s~~~~~~~~~~~~~~~~~lll~p~--~~~~G~------~~~f~~~~~~~~~~s~  152 (312)
                         | ++..+.        ++   ...+++..++.....+||+.+.-..-  +-..|+      .|..|..+.+.     
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~-----  295 (511)
T TIGR00806       221 LPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDES-----  295 (511)
T ss_pred             cccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCC-----
Confidence               0 000000        00   01123344444556777776443311  112232      22233222221     


Q ss_pred             ccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhh
Q 021469          153 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD  232 (312)
Q Consensus       153 ~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d  232 (312)
                        ..++.|.+-+..-+..++.++..|++-.++. +.-...++.+..+-+-++....+.++     -|++|+.+++++...
T Consensus       296 --~~~yNG~veA~~tllga~~a~~ag~~~~~w~-~~~~l~l~v~s~~~~gll~~m~~t~~-----Iw~~Y~~yvlf~~~y  367 (511)
T TIGR00806       296 --LNKYNGAVDAASTLLGAITSFIAGFVNIRWA-RWSKLLIAVVSAIQAGLVFWMSQSHD-----IWVLYVTYVLFRGIY  367 (511)
T ss_pred             --ccccCCHHHHHHHHHHHHHHHHHHhhcCCch-hhHHHHHHHHHHHHHHHhhhhhcccc-----hHHHHHHHHHHHHHH
Confidence              1126788888888888999999999855443 21122222222221212222234333     377999999999999


Q ss_pred             hHHhhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHH
Q 021469          233 GVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFF  271 (312)
Q Consensus       233 ~~~~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~  271 (312)
                      ....|...+-++.--.+++ .-.|++..++--+=+++...
T Consensus       368 ~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~  407 (511)
T TIGR00806       368 QFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITA  407 (511)
T ss_pred             HHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEE
Confidence            9999999998888766555 66788888875555555443

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>TIGR00893 2A0114 d-galactonate transporter

Probab=98.16  E-value=3.7e-05  Score=71.15  Aligned_cols=112  Identities=11%  Similarity=0.028  Sum_probs=85.0

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ..+|++...+.++..+++.+.|++.||++||+ .+.++.++......+..  +.++     .+..++..++.|++.+...
T Consensus        29 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~-~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~l~g~~~~~~~  100 (399)
T TIGR00893        29 AQYGYVFSAFSWGYVVGQFPGGWLLDRFGARK-TLAVFIVIWGVFTGLQA--FAGA-----YVSLYILRVLLGAAEAPFF  100 (399)
T ss_pred             hhHHHHHHHHHHHHHHHHHhHHHHHHhcCcce-eeHHHHHHHHHHHHHHH--HHcC-----HHHHHHHHHHHHHHHHhhh
Confidence            46788899999999999999999999999776 43445444433322221  2222     2456778899999999999


Q ss_pred             hhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          237 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       237 t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      +....++.+.+|++ +..+++......++|..++..+...+
T Consensus       101 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l  141 (399)
T TIGR00893       101 PGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWI  141 (399)
T ss_pred             hHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHH
Confidence            99999999999754 46789999999999999988777653

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=98.16  E-value=0.00049  Score=65.53  Aligned_cols=157  Identities=10%  Similarity=0.118  Sum_probs=96.9

Q ss_pred             HHHHHHHhhcChhhHHHHHHHH-----hhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCC
Q 021469          111 LSKSITTLLADVRMLLIIPLFA-----YSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLP  185 (312)
Q Consensus       111 ~~~~~~~~~~~~~~lll~p~~~-----~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~  185 (312)
                      .+|+..+++|+|+...++-+..     |..+.|.|. .-++.-+.+...|.+..|++-..--+.|++.=.+..++.+|+|
T Consensus       209 ~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~-~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig  287 (412)
T PF01306_consen  209 SLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFP-IYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIG  287 (412)
T ss_dssp             -HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             cHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            3577889999999966665333     333333221 1122222233345566788888888889998899999999998


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHH-HHHHHH
Q 021469          186 SITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQ-LKVWQC  263 (312)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~-~~~~qs  263 (312)
                      .|+.++ ++..+...=+.  ...+.++     ++...++=.+.|+--++.....--.+...+|++- +....+ +.+...
T Consensus       288 ~k~~Ll-lag~i~~iRi~--~~~~~~~-----~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~  359 (412)
T PF01306_consen  288 AKNLLL-LAGVIMAIRII--GSGFATN-----PWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQ  359 (412)
T ss_dssp             HHHHHH-HHHHHHHHHHH--HHHT--S-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHH
T ss_pred             hHhHHH-HHHHHHHHHHH--HHhhhcc-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHH
Confidence            776444 34333222222  2233333     3567778888898888888888888989897655 345554 466677


Q ss_pred             HHHHHHHHhhhhh
Q 021469          264 ASIAVVFFIGPYI  276 (312)
Q Consensus       264 ~g~ai~f~~~~~l  276 (312)
                      +|..+.....+.+
T Consensus       360 ~~~~i~s~~~G~l  372 (412)
T PF01306_consen  360 IGIIILSPLAGYL  372 (412)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHhhhHHhh
Confidence            7777766666654

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=98.13  E-value=0.00014  Score=68.68  Aligned_cols=112  Identities=19%  Similarity=-0.002  Sum_probs=84.7

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      .+++|++...+.++.++++.+.|++.||++||+ .+..+.++...+.++..  +.++     .+..++..++.|++.+..
T Consensus        49 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~l~G~~~~~~  120 (406)
T PRK11551         49 VAQMGWAFSAGILGLLPGALLGGRLADRIGRKR-ILIVSVALFGLFSLATA--QAWD-----FPSLLVARLLTGVGLGGA  120 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch-hHHHHHHHHHHHHHHHH--Hhcc-----HHHHHHHHHHHHhhHHHH
Confidence            356889999999999999999999999999876 44455544443333221  2222     245677888999999998


Q ss_pred             hhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          236 NTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       236 ~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      ......++.+.+|+ ++..++++......+|..++..+...
T Consensus       121 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~  161 (406)
T PRK11551        121 LPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVL  161 (406)
T ss_pred             HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88888999999964 55788999999999998888777654

>TIGR00895 2A0115 benzoate transport

Probab=98.13  E-value=3.9e-05  Score=71.53  Aligned_cols=112  Identities=19%  Similarity=0.088  Sum_probs=84.6

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ..+|++...+.++..+++.+.|++.||++||+ .+..+.++...+..+..  ..++     .+..++..++.|++.+...
T Consensus        52 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~g~~~~~~~  123 (398)
T TIGR00895        52 VQLGFLFSAGLIGMAFGALFFGPLADRIGRKR-VLLWSILLFSVFTLLCA--LATN-----VTQLLILRFLAGLGLGGLM  123 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHH-HHHHHHHHHHHHHHHHH--Hccc-----hHHHHHHHHHHhcccccch
Confidence            46788888899999999999999999998765 44555555444433322  2222     2346677889999999888


Q ss_pred             hhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          237 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       237 t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      .....++.+.+|++ +..++++......+|..++-.+.+.+
T Consensus       124 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l  164 (398)
T TIGR00895       124 PNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWL  164 (398)
T ss_pred             hhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHH
Confidence            99999999998754 46789999999999999888777654

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=98.12  E-value=0.0011  Score=63.91  Aligned_cols=158  Identities=15%  Similarity=0.085  Sum_probs=99.4

Q ss_pred             HHHHHHHH-hhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccccc--hhhHHHHHHhHHHHHHHHHHhhhhcCCCC
Q 021469          110 SLSKSITT-LLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPS  186 (312)
Q Consensus       110 ~~~~~~~~-~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~--~~g~v~~~~g~~~~ig~~~~G~l~d~~~~  186 (312)
                      ..+++.+. +++||..+++.-.++..........+...- +.+-.+|..  ...+.+..++.+.+++..+..+|.+|+++
T Consensus       223 ~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~y-y~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gk  301 (467)
T COG2211         223 LKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVY-YVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGK  301 (467)
T ss_pred             ccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhhe-eEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhch
Confidence            34444444 577888766666666655554444443111 111123322  34456667777778889999999999997


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhcc-------CCh-hhhHHHH
Q 021469          187 ITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFK-------HDT-EGAFAQL  258 (312)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~-------~~~-~~afa~~  258 (312)
                      |+ ++.++.++.+++....+ .++++.    ..+.++...+.+++.+..+....+++++.-+       .++ .-.++..
T Consensus       302 k~-~~~~~~~~~~i~~~~~~-f~~~~~----~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~  375 (467)
T COG2211         302 KK-LFLIGLLLLAVGYLLLY-FTPAGS----VVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGM  375 (467)
T ss_pred             HH-HHHHHHHHHHHHHHHHH-hhcCcc----hHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHH
Confidence            65 66777777776666544 444331    2456777788889999988888888877532       122 2467877


Q ss_pred             HHHHHHHHHHHHHhhh
Q 021469          259 KVWQCASIAVVFFIGP  274 (312)
Q Consensus       259 ~~~qs~g~ai~f~~~~  274 (312)
                      -+++=+|.+++-++.+
T Consensus       376 tF~~K~g~ala~~~~g  391 (467)
T COG2211         376 TFFRKLGLALAGFIPG  391 (467)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            7777777777765544

>PRK10504 putative transporter; Provisional

Probab=98.11  E-value=0.00011  Score=70.93  Aligned_cols=112  Identities=13%  Similarity=0.038  Sum_probs=81.2

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ...+.+...+.++.+++..+.|++.||++||+ ++..+.++...+.++.  ...++     .+...+..++.|++.+...
T Consensus        45 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~-~~~~~~~~~~~~~~~~--~~~~~-----~~~l~~~~~l~g~~~~~~~  116 (471)
T PRK10504         45 LHMHMVIVSYVLTVAVMLPASGWLADRVGVRN-IFFTAIVLFTLGSLFC--ALSGT-----LNELLLARVLQGVGGAMMV  116 (471)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH-HHHHHHHHHHHHHHHH--HHhCC-----HHHHHHHHHHHHhhhHHHH
Confidence            35677778888899999999999999999776 4444444443333322  12222     2345677889999999988


Q ss_pred             hhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          237 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       237 t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      .....++.+.+|+++ ..++++.+...++|..++-.+.+.+
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l  157 (471)
T PRK10504        117 PVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLL  157 (471)
T ss_pred             HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence            888888888887543 5688999999898888887776643

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=98.10  E-value=0.0002  Score=69.71  Aligned_cols=117  Identities=13%  Similarity=0.082  Sum_probs=79.4

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhc----CCCChhhHHHHHHHHHHHHHHHHHhcccCCC--------CCCC-c---hH
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTT----GLPSITFIVSGGAIAQVVVFLWILINYSVTS--------GVLG-T---LY  220 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~-~---~~  220 (312)
                      ...+.+..+..+...+...+.|.++|    |+|||++.+..+.+....++.++.  +.++.        +... .   +.
T Consensus        39 ~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~--~~~~~~~~~~~~~~~~~~~~~i~~  116 (477)
T TIGR01301        39 AWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIG--FAADIGHLFGDNLDKKTKPRAIIV  116 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHH--hCchhhhhccccccccchhHHHHH
Confidence            46788888999999999999999999    489888776555555544444332  21110        0000 1   11


Q ss_pred             HHHHHHHHHhhhhHHhhhhHhHHHHhccCCh---hhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          221 PLIMAALLGIGDGVLNTQLSALLGILFKHDT---EGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       221 ~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~---~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      ..+...++.++-...|.-.-+++++..|++.   +.+++....+.++|..+++.+...
T Consensus       117 ~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~  174 (477)
T TIGR01301       117 FVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAY  174 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2222334455666666777789999998654   358999999999999999987764

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=98.09  E-value=9.8e-05  Score=71.36  Aligned_cols=112  Identities=18%  Similarity=0.106  Sum_probs=85.1

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ..++++...+.++.+++..+.|++.||++||+ .+.++.++......+.  ...++     .+...+..++.|++.+...
T Consensus        37 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~--~~~~~-----~~~l~~~~~~~G~~~~~~~  108 (485)
T TIGR00711        37 SQVQWVITSYMLANAISIPLTGWLAKRFGTRR-LFLISTFAFTLGSLLC--GVAPN-----LELMIIFRVIQGFGGGPLI  108 (485)
T ss_pred             hhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHH-HHHHHHHHHHHHHHHH--hCcCC-----HHHHHHHHHHHHhhhhhHH
Confidence            46788999999999999999999999999776 4455555544443322  22222     2346677889999999999


Q ss_pred             hhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          237 TQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       237 t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ...+.++.+.+|+ ++..+++++.....+|..++-.+.+.+
T Consensus       109 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l  149 (485)
T TIGR00711       109 PLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWI  149 (485)
T ss_pred             HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHh
Confidence            9999999999874 446789999999888888887776654

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=98.07  E-value=0.00011  Score=78.87  Aligned_cols=112  Identities=19%  Similarity=0.075  Sum_probs=82.8

Q ss_pred             hhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHH--HHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          158 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVS--GGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       158 ~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      .++.+.+++.+..++.+.+.|.+.||++||+.+..  .+.+.......+.+  ..++     .+..++..++.|++.+.+
T Consensus        53 ~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~--~~~s-----~~~l~~~~~l~gi~~a~~  125 (1140)
T PRK06814         53 LVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGF--HLNS-----VPLLFAALFLMGIHSALF  125 (1140)
T ss_pred             HHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHH--HHhh-----HHHHHHHHHHHHHHHHhh
Confidence            46777888999999999999999999997753211  11111111111111  1122     345788899999999999


Q ss_pred             hhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          236 NTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ....++++.+.++++. ..+.++.....++|..++-.+.+.+
T Consensus       126 ~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l  167 (1140)
T PRK06814        126 GPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLA  167 (1140)
T ss_pred             chHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999987654 6899999999999999999888865

>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]

Probab=98.06  E-value=3.4e-05  Score=72.17  Aligned_cols=229  Identities=20%  Similarity=0.209  Sum_probs=140.7

Q ss_pred             CCcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcc
Q 021469           22 LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADAS  101 (312)
Q Consensus        22 ~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~  101 (312)
                      +++|+.||+..|+-.++-.+|.++|.-+.-++......      +.=|+++.++..+-..+-+++-+|.+.+++..    
T Consensus       188 f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk------~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~~----  257 (464)
T KOG3764|consen  188 FPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGK------SAPFLVLAIVLLLDGALQLLVIEPTEMDPDST----  257 (464)
T ss_pred             cccchhhhHHHHHHHHHHhccceecCCcccchHhhcCC------cCcHHHHHHHHHHHHHHHHheeCccccCcccc----
Confidence            45677899999999999999999999888777654332      23488888888888888777656544333210    


Q ss_pred             hhhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc-cc-hhhHHHHHHhHHHHHHHHHHhh
Q 021469          102 VNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG-VS-GVGGAMAVYGAFDAICSLAAGR  179 (312)
Q Consensus       102 ~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg-~~-~~g~v~~~~g~~~~ig~~~~G~  179 (312)
                              ++=+.++++++||++++..-....++...+|.-=.++. +..+.+. .+ ++|.+..-.++.-.+|..+.|+
T Consensus       258 --------~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlsl-wm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~  328 (464)
T KOG3764|consen  258 --------EQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSL-WMLETMFTPGWEVGLAFLPASLSYAIGTNLFGK  328 (464)
T ss_pred             --------ccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHH-HHHHhccCCCcceeeeecccccchhccCchHHH
Confidence                    11134788999999999998888999888887322111 0011111 01 2344444456677899999999


Q ss_pred             hhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCch-HHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhh---hH
Q 021469          180 LTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTL-YPLIMAALLGIGDGVLNTQLSALLGILFKHDTEG---AF  255 (312)
Q Consensus       180 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~---af  255 (312)
                      +.||++..+++...+.++..+...  . ..|....+.+.+ .-+.+.+.-|..|+..-.    +++.+-+.+++.   .+
T Consensus       329 la~k~~~~~wl~~~~gl~~~G~~~--~-~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P----~l~~lvd~rh~s~~~vY  401 (464)
T KOG3764|consen  329 LADKYPHLRWLLSLGGLATVGVSS--G-PIPFATSIAQLWVPNFGLGFGIGLADASLIP----TLGYLVDPRHVSGFNVY  401 (464)
T ss_pred             HHHhcCchhHHHHHHHHHHHHHHh--c-hhHhhhhHHHHhhhhHHHHHHHHHHHHHHhh----hhHHhcchhhcccccee
Confidence            999997433454433333332111  1 122111111111 134455555666655433    444444333333   77


Q ss_pred             HHHHHHHHHHHHHHHHhhhhh
Q 021469          256 AQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       256 a~~~~~qs~g~ai~f~~~~~l  276 (312)
                      +....++-++.+++|.++|.+
T Consensus       402 GsVyaIad~a~sla~a~GP~~  422 (464)
T KOG3764|consen  402 GSVYAIADAAFSLAYAIGPTF  422 (464)
T ss_pred             eeHHHHHHHHHHHhhhccccc
Confidence            777788888999999998854

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=98.06  E-value=0.00035  Score=68.39  Aligned_cols=130  Identities=16%  Similarity=0.123  Sum_probs=90.6

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      +.++++...|.++...+....|++.||++||+ ++..+.++.....++..  ..++     .+..++.-++.|++.+...
T Consensus        41 ~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~-~l~~~~~~~~~~~~~~~--~a~~-----~~~li~~r~l~G~g~~~~~  112 (495)
T PRK14995         41 NELLWIIDIYSLVMAGMVLPMGALGDRIGFKR-LLMLGGTLFGLASLAAA--FSPT-----ASWLIATRALLAIGAAMIV  112 (495)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHH--HcCC-----HHHHHHHHHHHHHHHHHHH
Confidence            46788888999999999999999999999775 55556555544433322  2222     2345666789999999988


Q ss_pred             hhhHhHHHHhccC--ChhhhHHHHHHHHHHHHHHHHHhhhhh----hHHHHHHHHHHHHHHHHH
Q 021469          237 TQLSALLGILFKH--DTEGAFAQLKVWQCASIAVVFFIGPYI----SLQAMLIVMVVGICVALV  294 (312)
Q Consensus       237 t~~~~i~g~~~~~--~~~~afa~~~~~qs~g~ai~f~~~~~l----~~~~~~~il~~~~~~~~~  294 (312)
                      .....++...+++  ++..+++++.....+|.+++-.+.+.+    ..++-+++...+.++..+
T Consensus       113 ~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~  176 (495)
T PRK14995        113 PATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMG  176 (495)
T ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHH
Confidence            8777778777743  345789999999999988888877654    345555555444444433

>TIGR00899 2A0120 sugar efflux transporter

Probab=98.06  E-value=0.00036  Score=64.80  Aligned_cols=114  Identities=10%  Similarity=-0.019  Sum_probs=74.3

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      ..++|+++.++.+..++.+.+.|++.||++||++++..+.++......+.  .+.++     ++..++..++.|.+.+..
T Consensus        32 ~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~--~~~~~-----~~~l~~~~~~~g~~~~~~  104 (375)
T TIGR00899        32 PAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLF--AWNRN-----YFLLLVLGVLLSSFASTA  104 (375)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHH--Hhcch-----HHHHHHHHHHHHhhhhhh
Confidence            35789999999999999999999999999877655444444433332221  22222     233445567777777766


Q ss_pred             hhhhHhHHHHhccCChh-hh--HHHHHHHHHHHHHHHHHhhhhh
Q 021469          236 NTQLSALLGILFKHDTE-GA--FAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~~~-~a--fa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ......+..+..|++.. .+  .+..+...++|.+++-.+...+
T Consensus       105 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l  148 (375)
T TIGR00899       105 NPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWL  148 (375)
T ss_pred             HHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHH
Confidence            66666666665554332 22  5677777888888887776654

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>TIGR00805 oat sodium-independent organic anion transporter

Probab=98.05  E-value=9.7e-05  Score=74.62  Aligned_cols=160  Identities=15%  Similarity=0.104  Sum_probs=83.9

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCC----------cC-CCCc-----hhhHHHHHHHHHHHHHHHHhccC
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKG----------GS-TSGT-----TLLFIVFLGVITLGTILMCFLRK   88 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~----------~~-~~~~-----~~~~~if~~i~~~g~~l~lfL~~   88 (312)
                      +++++++.|++.....+|.++|.++...+.....+          .+ ++.+     +..|.+..++.++..+.++++|+
T Consensus       203 ~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~  282 (633)
T TIGR00805       203 SKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPK  282 (633)
T ss_pred             ccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence            36899999999999999999999887766532110          00 0111     23355555555555544555554


Q ss_pred             Ccccc----ccc--hhh---c-ch----hhhhHHHHHHHHHHHhhcChhhHHHHHHHHh-hhhHhhhhhhcccccccccc
Q 021469           89 EEDKG----EKE--TAD---A-SV----NFYSYLVSLSKSITTLLADVRMLLIIPLFAY-SGLQQAFVWAEFTKEIVTPA  153 (312)
Q Consensus        89 ~~~~~----~~~--~~~---~-~~----~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~-~G~~~~f~~~~~~~~~~s~~  153 (312)
                      ..+++    +.+  +++   . +.    +.....++..+...++++||..+........ .+...++.. -.| .+....
T Consensus       283 ~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~-~lP-~yl~~~  360 (633)
T TIGR00805       283 ALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYIT-FLP-KYLENQ  360 (633)
T ss_pred             ccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH-HHH-HHHHHH
Confidence            21111    100  000   0 00    0001233444556678999987555443322 222222221 111 121222


Q ss_pred             ccc--chhhHHHHHHhH-HHHHHHHHHhhhhcCCCC
Q 021469          154 LGV--SGVGGAMAVYGA-FDAICSLAAGRLTTGLPS  186 (312)
Q Consensus       154 lg~--~~~g~v~~~~g~-~~~ig~~~~G~l~d~~~~  186 (312)
                      .|.  ...++++....+ +.++|.++.|++.||++.
T Consensus       361 ~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~  396 (633)
T TIGR00805       361 YGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKL  396 (633)
T ss_pred             cCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecc
Confidence            232  456666666665 467899999999998863

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PRK09528 lacY galactoside permease; Reviewed

Probab=98.05  E-value=4e-05  Score=73.06  Aligned_cols=157  Identities=13%  Similarity=0.129  Sum_probs=81.7

Q ss_pred             HhhcChhhHHHHHHHHhhhhHhhhhhhcccccccc-cccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHH
Q 021469          117 TLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGA  195 (312)
Q Consensus       117 ~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s-~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~  195 (312)
                      ..++||+...+.-.++...+..++.....+.-+.+ ..++..++|.+...++++.++++.+.|++.||++||+.+. ++.
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~-~~~   83 (420)
T PRK09528          5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLL-WII   83 (420)
T ss_pred             hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHH-HHH
Confidence            34567777665544444444334444433322222 1223457899999999999999999999999999876443 222


Q ss_pred             HHHHHHHHHHHh-cccCCCCCCCchH-HHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhh
Q 021469          196 IAQVVVFLWILI-NYSVTSGVLGTLY-PLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIG  273 (312)
Q Consensus       196 ~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~  273 (312)
                      ..........+. .+.+.-. ....+ .++..+..|.+-.........+.. .++++...+++..+.+.++|.+++-.+.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~g~~~~~~~~g~~i~~~~~  161 (420)
T PRK09528         84 SGLLVLFGPFFIYVFAPLLQ-YNILLGAIVGGIYLGFGFLAGAGAIEAYIE-RVSRRSGFEYGRARMWGSLGWALCAFIA  161 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhccchhhhhhHHH-HHHhhccccchhhHHhhhHHHHHHHHHH
Confidence            221111111110 1110000 00011 222334444433222222333322 2233334477888888899999988887


Q ss_pred             hhh
Q 021469          274 PYI  276 (312)
Q Consensus       274 ~~l  276 (312)
                      +.+
T Consensus       162 g~l  164 (420)
T PRK09528        162 GIL  164 (420)
T ss_pred             HHH
Confidence            765

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=98.04  E-value=0.00037  Score=65.68  Aligned_cols=112  Identities=20%  Similarity=0.176  Sum_probs=75.3

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      ...++.++..+.++.++++.+.|++.||++||+ .+..+.++...+.....  ..++     .+..++..++.|++.+..
T Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~-~~~~~~~~~~~~~~~~~--~~~~-----~~~l~~~~~~~g~~~~~~  113 (394)
T PRK11652         42 EGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRP-VILVGMSIFILGTLVAL--FAHS-----LTVLIAASAIQGLGTGVG  113 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChH-HHHHHHHHHHHHHHHHH--HHcc-----HHHHHHHHHHHHhhhhHH
Confidence            356788889999999999999999999999876 44455544443332221  2222     234566778889888877


Q ss_pred             hhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          236 NTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      ......+..+.+++++ ..+.+.......++..++-.+...
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~  154 (394)
T PRK11652        114 GVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGL  154 (394)
T ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7777777777776433 456677666666666555555443

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=98.03  E-value=0.00043  Score=66.16  Aligned_cols=112  Identities=13%  Similarity=0.059  Sum_probs=80.5

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      +..+.....+.++..++.++.|.+.||++||+ ++..+..+...+.++..  ..++     .+..++.-++.|++.+...
T Consensus        51 ~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~-~l~~~~~~~~~~~~~~~--~a~~-----~~~l~~~r~l~Gi~~~~~~  122 (413)
T PRK15403         51 SLAPASVSLYLAGGMALQWLLGPLSDRIGRRP-VLITGALIFTLACAATL--FTTS-----MTQFLIARFIQGTSICFIA  122 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhHHHHHcCchH-HHHHHHHHHHHHHHHHH--HcCC-----HHHHHHHHHHHHHHHHHHH
Confidence            34566777888899999999999999999876 55555555444433322  2222     2345667788899888777


Q ss_pred             hhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          237 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       237 t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ...+.++.+.+++++ .++.+.+.....+|..++-.++..+
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l  163 (413)
T PRK15403        123 TVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAAL  163 (413)
T ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            777778888887654 5788998888888888887777654

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=98.01  E-value=0.00027  Score=65.49  Aligned_cols=112  Identities=17%  Similarity=0.216  Sum_probs=80.0

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ..++++...+.++.++++.+.|++.||++||+ .+.++.++......+... .+++     ++..++..++.|++.+.+ 
T Consensus        37 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~i~~~~~~~-~~~~-----~~~~~~~~~~~g~~~~~~-  108 (366)
T TIGR00886        37 AQLGNLVAVPVLAGAVLRIILGFLVDKFGPRY-TTTLSLLLLAIPCLWAGL-AVQS-----YSVLLLLRLFIGIAGGSF-  108 (366)
T ss_pred             HHhhHhhHHHHHHHHHHHHHHHHHHHHhCchH-HHHHHHHHHHHHHHHHHH-Hhhh-----HHHHHHHHHHHHHhchhh-
Confidence            46788888999999999999999999999776 445565555544433221 1112     234566778889887765 


Q ss_pred             hhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          237 TQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       237 t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      .....++++.+|+ ++..+.+++....++|..++..+.+.+
T Consensus       109 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l  149 (366)
T TIGR00886       109 ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPI  149 (366)
T ss_pred             HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            4456788888864 456788999988889998888777643

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=97.99  E-value=0.00085  Score=63.27  Aligned_cols=219  Identities=12%  Similarity=0.055  Sum_probs=107.3

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHh-ccC-Cccccccchhhcch
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF-LRK-EEDKGEKETADASV  102 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lf-L~~-~~~~~~~~~~~~~~  102 (312)
                      ++++|...||+- .-|+|..+-.++.-.+......   +..+..-.++....++..+.+.+ ..+ |+.  |.+.     
T Consensus       135 ~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~---~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~--r~~~-----  203 (417)
T COG2223         135 KEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGF---LAWRNVAGIYVVALAIAAVLAWLGMNDVPEH--RASV-----  203 (417)
T ss_pred             hhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHHHhCCChhh--hccc-----
Confidence            468899999887 6666665555444333221110   01233444555555555555433 332 321  1110     


Q ss_pred             hhhhHHH-HHHHHHHHhhcChhhHHHHHH-HHhhhhHhhhhhhccccccccccccc--chhhHHHHHHhHHHHHHHHHHh
Q 021469          103 NFYSYLV-SLSKSITTLLADVRMLLIIPL-FAYSGLQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAG  178 (312)
Q Consensus       103 ~~~~s~~-~~~~~~~~~~~~~~~lll~p~-~~~~G~~~~f~~~~~~~~~~s~~lg~--~~~g~v~~~~g~~~~ig~~~~G  178 (312)
                         ++.+ +++|.   +.++|+...+.-+ +.-.|-+.+|-.. ++.-+ .+..|.  ...|...+++.+...+.=..+|
T Consensus       204 ---~~~~~~~~~~---v~~~~~~W~lsllY~~tFG~Fvgfs~~-l~~~~-~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG  275 (417)
T COG2223         204 ---KPQLPAQLKA---VFSNKDTWLLSLLYFATFGGFVGFSAY-LPMYL-VTQFGLSPVTAGLIAFLFPLIGALARPLGG  275 (417)
T ss_pred             ---cccchhHHHH---HhcCcchHHHHHHHHHHHHHHHHHHHH-HHHHH-HHhcCCChhhHHHHHHHHHHHHHHHHhccc
Confidence               0111 33433   3445555333321 2223333333221 22111 111232  2345666777777777778999


Q ss_pred             hhhcCCCChhhHHHHHHHHHHHHHHHHHhcccC-CCCCCCc-hHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHH
Q 021469          179 RLTTGLPSITFIVSGGAIAQVVVFLWILINYSV-TSGVLGT-LYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFA  256 (312)
Q Consensus       179 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa  256 (312)
                      .|+||+++++.+...-....+...++   .+++ .....++ ..++...+.++++-+.-|-..|.++-..|+++...+-+
T Consensus       276 ~LsDR~Gg~rv~~~~f~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G  352 (417)
T COG2223         276 WLSDRIGGRRVTLAVFVGMALAAALL---SLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTG  352 (417)
T ss_pred             hhhhhccchhHHHHHHHHHHHHHHHH---HccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHH
Confidence            99999987664433333232333322   2222 2111122 23444455666666666677788888888876655555


Q ss_pred             HHHHHHHHH
Q 021469          257 QLKVWQCAS  265 (312)
Q Consensus       257 ~~~~~qs~g  265 (312)
                      +.-..-++|
T Consensus       353 ~vga~G~lG  361 (417)
T COG2223         353 IVGAIGGLG  361 (417)
T ss_pred             HHHHhcccc
Confidence            555554444

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=97.98  E-value=0.0053  Score=60.32  Aligned_cols=112  Identities=13%  Similarity=0.127  Sum_probs=71.8

Q ss_pred             HHHHHHhHHHHHHHHHH----hhhhcCCCChhhHHHHHHHHHHHHHHHHHh--cccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469          161 GAMAVYGAFDAICSLAA----GRLTTGLPSITFIVSGGAIAQVVVFLWILI--NYSVTSGVLGTLYPLIMAALLGIGDGV  234 (312)
Q Consensus       161 ~v~~~~g~~~~ig~~~~----G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~G~~d~~  234 (312)
                      ....+.++..++.+.+.    +++.||.+.+ ..+.+|.++...++..+..  .+..+.....+++....++++|+++.+
T Consensus       320 ~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~-~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~  398 (500)
T PRK09584        320 QYQALNPFWIMIGSPILAAIYNKMGDRLPMP-HKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELM  398 (500)
T ss_pred             HHHHHhHHHHHHHHHHHHHHHHHhCcCCCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHH
Confidence            34444554444454444    5555554432 2456777777767665432  222221222235678889999999999


Q ss_pred             HhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhh
Q 021469          235 LNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIG  273 (312)
Q Consensus       235 ~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~  273 (312)
                      .....++++.++.|++ +.++++.+-+..++|..++-.+.
T Consensus       399 ~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~  438 (500)
T PRK09584        399 ISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVA  438 (500)
T ss_pred             HhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999864 46889988877777777664443

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=97.97  E-value=0.0013  Score=61.83  Aligned_cols=243  Identities=14%  Similarity=0.116  Sum_probs=139.0

Q ss_pred             cccceeecccchhhhhhcCCCcCceeechhhHHHHHHHHhHhhhhHHh-hHhhcCCCC-cCC-----------CCchhhH
Q 021469            3 WRGGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT-LAVLKDDKG-GST-----------SGTTLLF   69 (312)
Q Consensus         3 ~aqG~Ylt~~s~~~~~~~~~~~~~~~g~~~gifw~i~~~s~iiG~li~-~~~~~~~~~-~~~-----------~~~~~~~   69 (312)
                      |+-+.|++.+.++          ++..+-.++--+++.+|.++|.++. +++++...+ .+.           ...+..|
T Consensus       123 taaNp~v~~lg~~----------~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pY  192 (422)
T COG0738         123 TAANPYVTLLGKP----------ESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPY  192 (422)
T ss_pred             hccchHHHHhCCc----------hhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHH
Confidence            3455677777654          3556677888899999999999775 444532110 000           1123456


Q ss_pred             HHHHHHHHHHHHHHHhccCCccccccchhhcchhhhhHHHHHHHHHHHhhcChhh-HHHHHHHHhhhhHhhhhhhccccc
Q 021469           70 IVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRM-LLIIPLFAYSGLQQAFVWAEFTKE  148 (312)
Q Consensus        70 ~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~-lll~p~~~~~G~~~~f~~~~~~~~  148 (312)
                      .++...-.+=.+.....+.|+.++.++++. +  +++.      ...+++++|+. +-.+-.|+|.|.|.+.++=. .+ 
T Consensus       193 l~~~~~lvll~v~~~~~k~p~~~~~~~~~~-~--~~~~------~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl-~~-  261 (422)
T COG0738         193 LILAGLLVLLAVLILLSKLPDLQVAAPSLG-A--SGSA------GLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFL-VS-  261 (422)
T ss_pred             HHHHHHHHHHHHHHHhccCCcCCccccccc-c--cccc------hHHHHHhChHHHHHHHHHHHHHhHHHHHHHHH-HH-
Confidence            555554444444444455455443322110 0  1110      24456777776 45666899999999987421 11 


Q ss_pred             cccccccc--chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHH
Q 021469          149 IVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAA  226 (312)
Q Consensus       149 ~~s~~lg~--~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (312)
                      +..+..|.  ....+.+..+..+-++|=+++..+.+|++..+.+...+.+..+.+....+.   ++      .+.....+
T Consensus       262 y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~---~g------~v~~~~l~  332 (422)
T COG0738         262 YLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALI---GG------VVALYALF  332 (422)
T ss_pred             HHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh---cC------hHHHHHHH
Confidence            11222232  345666777787888888787788788764444543333333333332221   11      24667777


Q ss_pred             HHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          227 LLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       227 l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      +.|+..+.....++++--+-.+++.+ .-+..-..-.+|.++.=.+.+.+
T Consensus       333 ~ig~F~simfPTIfslal~~l~~~ts-~~s~~l~maivGGAiiP~l~G~i  381 (422)
T COG0738         333 LIGLFNSIMFPTIFSLALKNLGEHTS-VGSGLLVMAIVGGAIIPPLQGVI  381 (422)
T ss_pred             HHHHHhHHHHHHHHHHHHhccCcccc-ccceeeeeheecchHHHHHHHHH
Confidence            88888888888888877777775554 44444455556667666665554

>PRK12307 putative sialic acid transporter; Provisional

Probab=97.96  E-value=0.0003  Score=66.87  Aligned_cols=111  Identities=10%  Similarity=-0.112  Sum_probs=81.9

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      .+.+++..++.++..+++.+.|.+.||++||+ .+.++.++.........  +.++     .+..++..++.|++.+...
T Consensus        53 ~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~-~l~~~~~~~~~~~~~~~--~~~~-----~~~l~~~r~l~G~g~g~~~  124 (426)
T PRK12307         53 MEGAFLATAAFIGRPFGGALFGLLADKFGRKP-LMMWSIVAYSVGTGLSG--LASG-----VIMLTLSRFIVGMGMAGEY  124 (426)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHHH--HHhH-----HHHHHHHHHHHHHHHhhHH
Confidence            45788888899999999999999999999775 54555555444333221  2122     2456777889999999888


Q ss_pred             hhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          237 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       237 t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      .....++.+.+|++ +..+.++.....++|..++-.+.+.
T Consensus       125 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~  164 (426)
T PRK12307        125 ACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPS  164 (426)
T ss_pred             HHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHH
Confidence            88888999988755 4678888888888888877665543

>TIGR00897 2A0118 polyol permease family

Probab=97.95  E-value=0.0004  Score=65.92  Aligned_cols=114  Identities=12%  Similarity=0.107  Sum_probs=75.3

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHH-HhcccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI-LINYSVTSGVLGTLYPLIMAALLGIGDGV  234 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~G~~d~~  234 (312)
                      ...+|.++..++++..+++.+.|++.||++||+ .+..+..+...+.... ....... +   ++..++..++.|++-+.
T Consensus        47 ~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~-~l~~~~~~~~~~~~~~~~~~~~~~-~---~~~l~~~~~i~G~g~~~  121 (402)
T TIGR00897        47 PQQSASAFTLYGIAAAISAWISGVVAEIIGPLK-TMMIGLLLWCVGHAAFIVFGLGHA-N---YPLILLFYGIRGLGYPL  121 (402)
T ss_pred             HHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHH-HHHHHHHHHHHHHHHHHHHhccCc-c---HHHHHHHHHHHHcchHH
Confidence            457899999999999999999999999999876 4445555544433221 1111111 1   23345667778888776


Q ss_pred             HhhhhHhHHHHhcc-CChhhhHHHHHHHHHHHHH-HHHHhhh
Q 021469          235 LNTQLSALLGILFK-HDTEGAFAQLKVWQCASIA-VVFFIGP  274 (312)
Q Consensus       235 ~~t~~~~i~g~~~~-~~~~~afa~~~~~qs~g~a-i~f~~~~  274 (312)
                      ........+.+.+| +++.++.+++....++|.. ++-.+..
T Consensus       122 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~  163 (402)
T TIGR00897       122 FAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSS  163 (402)
T ss_pred             HHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            65555555666665 4557899999998888863 4544443

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>PRK03699 putative transporter; Provisional

Probab=97.95  E-value=0.00049  Score=65.08  Aligned_cols=110  Identities=13%  Similarity=0.091  Sum_probs=75.6

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      .++++.+...+.++..+++++.|++.||++||+ .+..+.++......+..  +.++     ++...+..++.|++.+..
T Consensus        41 ~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~-~~~~~~~~~~i~~~l~~--~~~~-----~~~~~~~~~l~G~~~g~~  112 (394)
T PRK03699         41 VSSMSNTFTFLNAGILISIFLNAWLMEIIPLKR-QLIFGFALMILAVAGLM--FSHS-----LALFSIAMFVLGVVSGIT  112 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHH--Hcch-----HHHHHHHHHHHHHhhHhh
Confidence            356788888899999999999999999999776 44455544443333222  2222     234567778889999888


Q ss_pred             hhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhh
Q 021469          236 NTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIG  273 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~  273 (312)
                      .+....++.+.+|+++ ..+.+......++|..++-.+.
T Consensus       113 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~  151 (394)
T PRK03699        113 MSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIA  151 (394)
T ss_pred             ccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8888888889887643 4566666666666655554443

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=97.94  E-value=0.0012  Score=64.14  Aligned_cols=147  Identities=8%  Similarity=-0.004  Sum_probs=91.0

Q ss_pred             hHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHH-H
Q 021469          124 MLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQV-V  200 (312)
Q Consensus       124 ~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~-~  200 (312)
                      .+.+.-+.+..+|..=+..+.....+....+|  .++.+....+..++..++.+..|.+.||+|.|+.. .++.++.. .
T Consensus        35 ~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~-~~~~ll~~i~  113 (462)
T PRK15034         35 NLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWT-VFSTAILIIP  113 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH-HHHHHHHHHH
Confidence            34444444555555444444322222221233  34678888888889999999999999999977644 33333322 2


Q ss_pred             HHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          201 VFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      .+...+..-.+.+   +++..+++.+++|++-+ ........+...||++ +..+.+++...-++|..++..+.+.
T Consensus       114 ~~~~~~a~~~~~~---s~~~lli~r~l~Gigg~-~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~  185 (462)
T PRK15034        114 CVWLGIAVQNPNT---PFGIFIVIALLCGFAGA-NFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPL  185 (462)
T ss_pred             HHHHHHHHcccCC---CHHHHHHHHHHHHHHHH-hHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence            2222211000111   13457888999999844 5566677888889865 5689999988888888887777664

>PRK11043 putative transporter; Provisional

Probab=97.93  E-value=0.00068  Score=64.04  Aligned_cols=113  Identities=16%  Similarity=0.142  Sum_probs=77.6

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      .+++|.+...+.++..+++.+.|++.||++||+ ++..+..+......+.  .+.++     .+..++..++.|++.+..
T Consensus        40 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~--~~~~~-----~~~l~~~~~l~G~~~~~~  111 (401)
T PRK11043         40 ASAVSASLSLFLAGFALGQLLWGPLSDRYGRKP-VLLAGLSLFALGSLGM--LWVES-----AAQLLVLRFVQAVGVCSA  111 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcH-HHHHHHHHHHHHHHHH--HHhcC-----HHHHHHHHHHHHhhhHHH
Confidence            456888999999999999999999999999776 5455554444333322  22222     234556677888887776


Q ss_pred             hhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          236 NTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ......++.+.+++++ ..+++.......+|.+++-.+...+
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l  153 (401)
T PRK11043        112 AVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWL  153 (401)
T ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6666678888887654 4677777777777777776665543

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=97.93  E-value=0.00081  Score=64.92  Aligned_cols=109  Identities=12%  Similarity=0.073  Sum_probs=72.9

Q ss_pred             ccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469          155 GVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGV  234 (312)
Q Consensus       155 g~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~  234 (312)
                      ..+..|.++..+.++.++++.+.|++.||+++|+ ++.++.++..............+.+   .+..++..++.|++.+.
T Consensus        61 s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~-~l~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~l~gi~~g~  136 (452)
T PRK11273         61 SRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRV-FLPAGLILAAAVMLFMGFVPWATSS---IAVMFVLLFLCGWFQGM  136 (452)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCch-hHHHHHHHHHHHHHHHHhhhccccc---HHHHHHHHHHHHHHHhc
Confidence            3467888999999999999999999999999876 4455554444333222111001111   23456667888888887


Q ss_pred             HhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHH
Q 021469          235 LNTQLSALLGILFKHD-TEGAFAQLKVWQCASIA  267 (312)
Q Consensus       235 ~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~a  267 (312)
                      .......++.+.+|++ +..+.++++...++|.+
T Consensus       137 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~  170 (452)
T PRK11273        137 GWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGG  170 (452)
T ss_pred             cchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhh
Confidence            6665666777777654 46788888888777753

>TIGR00898 2A0119 cation transport protein

Probab=97.92  E-value=0.0003  Score=68.60  Aligned_cols=112  Identities=13%  Similarity=0.106  Sum_probs=82.1

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ...+.+..++.++..+++.+.|++.||+|||+ ++.++.++..++.+..  .+.++     .+..++..++.|++.+...
T Consensus       127 ~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~-~~~~~~~~~~i~~~~~--~~~~~-----~~~~~~~r~l~G~~~~~~~  198 (505)
T TIGR00898       127 WKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKK-VLLLSTLVTAVSGVLT--AFSPN-----YTVFLVFRLLVGMGIGGIW  198 (505)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHHhhhhccchH-HHHHHHHHHHHHHHHH--HHccc-----HHHHHHHHHHHHhhccchH
Confidence            35788899999999999999999999999876 4445555544333222  22222     3456778889999999999


Q ss_pred             hhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          237 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       237 t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      .....++.+.+|++ +..+.++.....++|..++-.+...+
T Consensus       199 ~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~  239 (505)
T TIGR00898       199 VQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI  239 (505)
T ss_pred             HHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999765 45677777777777777766665443

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=97.92  E-value=0.00028  Score=67.34  Aligned_cols=114  Identities=19%  Similarity=0.153  Sum_probs=79.3

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcC----CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCC-chHHHHHHHHHHhh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTG----LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG-TLYPLIMAALLGIG  231 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~G~~  231 (312)
                      ..+|.++....+..++...+.|.+.||    +|||++.+..+.+.......+++  +.|+.+... ..+.++..++++.+
T Consensus        35 ~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  112 (437)
T TIGR00792        35 AFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF--TTPDFSATGKLVYAYITYILLGLF  112 (437)
T ss_pred             HHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH--hCCCCCcchHHHHHHHHHHHHHHH
Confidence            567899999999999999999999997    56667777677666655544333  333321111 13456677888999


Q ss_pred             hhHHhhhhHhHHHHhccCCh--hhhHHHHHHHHHHHHHHHHHh
Q 021469          232 DGVLNTQLSALLGILFKHDT--EGAFAQLKVWQCASIAVVFFI  272 (312)
Q Consensus       232 d~~~~t~~~~i~g~~~~~~~--~~afa~~~~~qs~g~ai~f~~  272 (312)
                      .++.++-..++..+..+|++  .+..+.......+|..++..+
T Consensus       113 ~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~  155 (437)
T TIGR00792       113 YSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVI  155 (437)
T ss_pred             HHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            98888777788888775544  456777777777877666554

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]

Probab=97.92  E-value=0.00047  Score=67.76  Aligned_cols=151  Identities=20%  Similarity=0.281  Sum_probs=101.2

Q ss_pred             HHhhcChhhHHHH--HHHHhhhhHhhhhh-hcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCC-hhhHH
Q 021469          116 TTLLADVRMLLII--PLFAYSGLQQAFVW-AEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPS-ITFIV  191 (312)
Q Consensus       116 ~~~~~~~~~lll~--p~~~~~G~~~~f~~-~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~-~~~~~  191 (312)
                      +++++||.++++.  ..+.+.|+...+.. ..|....   -...+...+++.+.|+.+++|=++.|.+.|+... +..+.
T Consensus       292 ~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~---g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~  368 (509)
T KOG2504|consen  292 LSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSL---GLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLF  368 (509)
T ss_pred             HHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHH
Confidence            5788888775544  34445555544442 2233222   1123567888899999999999999999998652 34445


Q ss_pred             HHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHH
Q 021469          192 SGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVF  270 (312)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f  270 (312)
                      .++.+.+..+..+    .|...+   ++......+++|++.+.+......++.++.+.++ ..++++..++++++.-++=
T Consensus       369 ~~~ll~~gl~~~~----~p~~~~---~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gp  441 (509)
T KOG2504|consen  369 LLTLLIAGLARLF----LPFATT---YVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGP  441 (509)
T ss_pred             HHHHHHHHHHHHH----HHHhcc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCc
Confidence            5555444433322    222211   2457888999999999999999988888886444 7899999999999888776


Q ss_pred             Hhhhhh
Q 021469          271 FIGPYI  276 (312)
Q Consensus       271 ~~~~~l  276 (312)
                      -+...+
T Consensus       442 Piag~~  447 (509)
T KOG2504|consen  442 PIAGLL  447 (509)
T ss_pred             ccceee
Confidence            665543

>PRK11010 ampG muropeptide transporter; Validated

Probab=97.91  E-value=0.0013  Score=64.38  Aligned_cols=155  Identities=8%  Similarity=-0.010  Sum_probs=96.8

Q ss_pred             HHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCC-----CChhh
Q 021469          115 ITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL-----PSITF  189 (312)
Q Consensus       115 ~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~-----~~~~~  189 (312)
                      ..+..++||...+.-+.+.+|...+...+..+.-+-..-...+.+|+.. ..+.. .++.++.|.+.||+     |||++
T Consensus         5 ~l~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~-~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~   82 (491)
T PRK11010          5 YLRIFQQPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFS-LVGQA-YVFKFLWSPLMDRYTPPFLGRRRG   82 (491)
T ss_pred             HHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHH-HHHHH-HHHHHHHHHHHHcccccCCCCchH
Confidence            3466678888877778888888777665543332211112234566642 12222 26889999999998     87765


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHH
Q 021469          190 IVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH-DTEGAFAQLKVWQCASIAV  268 (312)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai  268 (312)
                      .+.++.+....+..++. ..+|..   +.++..+..++.|++.+.......++..+.+|+ ++..+.++......+|..+
T Consensus        83 ~ll~~~i~~~~~~~~~a-~~~~~~---~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~ll  158 (491)
T PRK11010         83 WLLATQLLLLVAIAAMG-FLEPGT---QLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLV  158 (491)
T ss_pred             HHHHHHHHHHHHHHHHH-HcCCcc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHH
Confidence            55555555544433332 222221   123456677788888888888888899998874 4456778877777777777


Q ss_pred             HHHhhhh
Q 021469          269 VFFIGPY  275 (312)
Q Consensus       269 ~f~~~~~  275 (312)
                      +-.....
T Consensus       159 g~~l~~~  165 (491)
T PRK11010        159 SGGLALW  165 (491)
T ss_pred             HHHHHHH
Confidence            7655444

>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=97.90  E-value=0.001  Score=64.62  Aligned_cols=263  Identities=12%  Similarity=0.005  Sum_probs=134.4

Q ss_pred             ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhc--cCCcccccc---chhhc
Q 021469           26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFL--RKEEDKGEK---ETADA  100 (312)
Q Consensus        26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL--~~~~~~~~~---~~~~~  100 (312)
                      ++|+++.++..+..|+|.+++..++-.+-.. .-    .....|-++.+++++=.++.+++  ++|++...-   |.+..
T Consensus       160 ~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s-~~----GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~~El~~I  234 (466)
T KOG2532|consen  160 NERSTFIAILTAGSQLGTIITMPVSGLLCES-SL----GWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNISEKELKYI  234 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc-CC----CCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHH
Confidence            6899999999999999999999777666543 11    13456667776666666554333  445553321   10000


Q ss_pred             chhhhh-HHHH-HHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHH
Q 021469          101 SVNFYS-YLVS-LSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLA  176 (312)
Q Consensus       101 ~~~~~~-s~~~-~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~  176 (312)
                      +..+.. ..++ .--.-.++++|+.++......+-..+..-+... |...|.++.++  +++.|+.-++=-+...+..++
T Consensus       235 ~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~-y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~  313 (466)
T KOG2532|consen  235 EKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLT-YLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFV  313 (466)
T ss_pred             HhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHH
Confidence            000000 0000 001133467888887777655544443333333 33344454444  457788888778888999999


Q ss_pred             HhhhhcCCCC-------hhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHh-cc
Q 021469          177 AGRLTTGLPS-------ITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGIL-FK  248 (312)
Q Consensus       177 ~G~l~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~-~~  248 (312)
                      .|.+.||..+       ++.++-..... ..+..++.+.+-++++    .+.-++....+.+-...+..-....+.+ .|
T Consensus       314 ~g~lsD~l~~~~ls~t~~rkifn~i~~~-~~ai~l~~l~~~~~~~----~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~ap  388 (466)
T KOG2532|consen  314 AGQLSDRLTFRILSETTVRKIFNTIAFG-GPAVFLLVLAFTSDEH----RLLAVILLTIAIGLSGFNISGFYKNHQDIAP  388 (466)
T ss_pred             HHHHHHHHhhccCchHhHHHHHHhHHHH-HHHHHHHeeeecCCCc----chHHHHHHHHHHHHcccchhhhHhhhhhccc
Confidence            9999997533       12232211111 1111222223333321    1122222222233333333333344444 44


Q ss_pred             CChhhhHHHHHHHHHHHHHHHHHhhhhhh-----HHHH--HHHHHHHHHHHHHHHHHh
Q 021469          249 HDTEGAFAQLKVWQCASIAVVFFIGPYIS-----LQAM--LIVMVVGICVALVGILFL  299 (312)
Q Consensus       249 ~~~~~afa~~~~~qs~g~ai~f~~~~~l~-----~~~~--~~il~~~~~~~~~~~~~~  299 (312)
                      ......+++.++.-++...++=.+-+.+.     .+|+  +.+..++++++.+.|.+.
T Consensus       389 q~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f  446 (466)
T KOG2532|consen  389 QHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF  446 (466)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence            44445666666665555544444433321     2444  444446667777666655

>PRK11462 putative transporter; Provisional

Probab=97.89  E-value=0.00076  Score=65.51  Aligned_cols=114  Identities=23%  Similarity=0.167  Sum_probs=81.7

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcC----CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCC-chHHHHHHHHHHhh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTG----LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG-TLYPLIMAALLGIG  231 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~G~~  231 (312)
                      ..+|.++.+.-+-.++.-.+.|.++||    +|||+|-++++.+.....+.+++  ++|+.+... ..++++.+.++..+
T Consensus        45 ~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf--~~p~~s~~~~~~y~~~~~~~~~~~  122 (460)
T PRK11462         45 GFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAY--STPDLSMNGKMIYAAITYTLLTLL  122 (460)
T ss_pred             HHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHH--hCCCCCcchHHHHHHHHHHHHHHH
Confidence            356777877888899999999999995    56777777777777666655443  344322111 23577888999999


Q ss_pred             hhHHhhhhHhHHHHhccCChh--hhHHHHHHHHHHHHHHHHHh
Q 021469          232 DGVLNTQLSALLGILFKHDTE--GAFAQLKVWQCASIAVVFFI  272 (312)
Q Consensus       232 d~~~~t~~~~i~g~~~~~~~~--~afa~~~~~qs~g~ai~f~~  272 (312)
                      ..+.+.--.++..++.+|.+|  +..+......++|..++..+
T Consensus       123 ~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~  165 (460)
T PRK11462        123 YTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVL  165 (460)
T ss_pred             HHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999988999998887665  46777777777776555444

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=97.86  E-value=0.00092  Score=62.97  Aligned_cols=109  Identities=19%  Similarity=0.186  Sum_probs=74.5

Q ss_pred             hhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhh
Q 021469          159 VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQ  238 (312)
Q Consensus       159 ~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~  238 (312)
                      +|.++.++.+...+++.+.|++.||++||+ .+..+.++......+..  +.++     .+..++..++.|++.+.. ..
T Consensus        56 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~g~~~~~~-~~  126 (408)
T PRK09874         56 SGLVFSITFLFSAIASPFWGGLADRKGRKI-MLLRSALGMGIVMVLMG--LAQN-----IWQFLILRALLGLLGGFV-PN  126 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhCcHH-HHHHHHHHHHHHHHHHH--HHhh-----HHHHHHHHHHHHHhhhhH-Hh
Confidence            578888899999999999999999999776 44455554444433221  2122     234566677788876553 44


Q ss_pred             hHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          239 LSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       239 ~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ....+.+.+++ ++..+.+.......+|..++..+.+.+
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l  165 (408)
T PRK09874        127 ANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLL  165 (408)
T ss_pred             HHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55566677764 345788888888888888887776654

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=97.86  E-value=0.00053  Score=66.25  Aligned_cols=116  Identities=14%  Similarity=-0.007  Sum_probs=81.2

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHh-c---ccC-CCCCCCchHHHHHHHHHHhh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-N---YSV-TSGVLGTLYPLIMAALLGIG  231 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~-~~~~~~~~~~~~~~~l~G~~  231 (312)
                      ...+++...+.++..+++++.|++.||+|||+ .+.++.++...+.+.... .   .+. +.+.......++.-++.|++
T Consensus        55 ~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~-~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~  133 (479)
T PRK10077         55 SLLGFCVASALIGCIIGGALGGYCSNRFGRRD-SLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIG  133 (479)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhh
Confidence            45688888999999999999999999999876 444555444333222111 1   110 11100012345677999999


Q ss_pred             hhHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhh
Q 021469          232 DGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIG  273 (312)
Q Consensus       232 d~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~  273 (312)
                      .+........++++.+|++ +..++++......+|..++...+
T Consensus       134 ~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~  176 (479)
T PRK10077        134 VGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVN  176 (479)
T ss_pred             HhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999854 46789998888888888876654

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=97.86  E-value=7e-05  Score=69.18  Aligned_cols=106  Identities=13%  Similarity=0.089  Sum_probs=80.6

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ..+|++...+.++..+++++.|++.||++||+ .+.++.++...+.++..  +.++     .+..++..++.|++.+...
T Consensus        30 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~g~~~~~~~  101 (379)
T TIGR00881        30 TDLGLLLSSFSIAYGISKFVMGSVSDRSNPRV-FLPIGLILCAIVNLFFG--FSTS-----LWVMAALWALNGIFQGMGW  101 (379)
T ss_pred             hHHHHHHHHHHHHHHhhhhhhhHHHHhhCCee-hhHHHHHHHHHHHHHHH--Hhhh-----HHHHHHHHHHHHhhccccC
Confidence            46788889999999999999999999999775 54556555544433322  2122     2456778888999999988


Q ss_pred             hhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHH
Q 021469          237 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVF  270 (312)
Q Consensus       237 t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f  270 (312)
                      ...+.++.+.+|++ +..++++......+|..++-
T Consensus       102 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~  136 (379)
T TIGR00881       102 PPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLP  136 (379)
T ss_pred             CchHHHHHHhcCHhhheeeEeehhccchhHHHHHH
Confidence            99999999999754 45788888888888888776

>PRK03893 putative sialic acid transporter; Provisional

Probab=97.84  E-value=0.00046  Score=67.05  Aligned_cols=112  Identities=9%  Similarity=-0.084  Sum_probs=82.8

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ...+.++..+.++.++++++.|.+.||++||+ .+..+.++...+.+...  +.++     .+..++..++.|++.+...
T Consensus        55 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~~--~~~~-----~~~l~~~~~l~G~~~~~~~  126 (496)
T PRK03893         55 VQAASLISAAFISRWFGGLLLGAMGDRYGRRL-AMVISIVLFSVGTLACG--FAPG-----YWTLFIARLVIGMGMAGEY  126 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHH--HHhH-----HHHHHHHHHHHHHHHHHHH
Confidence            45778888899999999999999999999775 44455544444433222  2222     2456778889999999988


Q ss_pred             hhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          237 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       237 t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      .....++.+.+++++ ..++++.....++|..++-.+...+
T Consensus       127 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l  167 (496)
T PRK03893        127 GSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLV  167 (496)
T ss_pred             HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            888899999887544 5788898888888888887766643

>PTZ00207 hypothetical protein; Provisional

Probab=97.82  E-value=0.0015  Score=65.23  Aligned_cols=108  Identities=11%  Similarity=0.050  Sum_probs=74.5

Q ss_pred             hhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhh
Q 021469          158 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT  237 (312)
Q Consensus       158 ~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t  237 (312)
                      +++.+... +..-..+.+..|++.||+|+|. ++.++.++..+.+++..+.....- ....+..++..++.|++.+..++
T Consensus        63 ~l~~i~sv-g~~~g~~~lp~G~L~Dr~G~R~-vllig~ll~~iG~ll~ala~~~~i-~~s~~~l~l~r~l~G~G~~~~~~  139 (591)
T PTZ00207         63 DLSTITTV-GIAVGYFLLPYSFIYDYLGPRP-IFVLSMTVFCLGTLLFALTFQEVI-EGSVVRLSVYNGLMTLGCMLFDL  139 (591)
T ss_pred             HHHHHHHH-HHHHHHHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHhcccc-cCcHHHHHHHHHHHHHHHHHHHH
Confidence            34444432 3333445667899999999775 666777776666554432211100 00123456677789999999888


Q ss_pred             hhHhHHHHhccCChhhhHHHHHHHHHHHHHH
Q 021469          238 QLSALLGILFKHDTEGAFAQLKVWQCASIAV  268 (312)
Q Consensus       238 ~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai  268 (312)
                      .....+.+.||+++..+.++.+....+|.++
T Consensus       140 ~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI  170 (591)
T PTZ00207        140 GAVVTVLSVFPSNRGAVVAIMKTFTGLGSAI  170 (591)
T ss_pred             HHHHHHHHhChhhhHHHHHHHHHHHHHHHHH
Confidence            8888899999988888999999999999986

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=97.81  E-value=0.00032  Score=68.04  Aligned_cols=113  Identities=9%  Similarity=-0.090  Sum_probs=80.0

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHH-HHHHHHh--cccCCCCCCCchHHHHHHHHHHhhh
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVV-VFLWILI--NYSVTSGVLGTLYPLIMAALLGIGD  232 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~l~G~~d  232 (312)
                      ..+.|++...+.++..++..+.|.+.||+++|+ ++.++.++... .+.....  ...++     .+..++.-++.|++.
T Consensus        63 ~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~-~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~r~l~G~~~  136 (467)
T PRK09556         63 TTELGMIGLGFSITYGVGKTLVGYYADGKNTKQ-FLPFLLILSAICMLGFGASLGSGSVS-----LGLMIALWALSGFFQ  136 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhHhhccCccc-hHHHHHHHHHHHHHHHHHHHhcccch-----HHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999776 33333333221 2221111  11121     234566777889998


Q ss_pred             hHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhh
Q 021469          233 GVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       233 ~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~  274 (312)
                      +........++.+.+|++ +..+++++....++|.+++-.+..
T Consensus       137 ~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~  179 (467)
T PRK09556        137 STGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVAL  179 (467)
T ss_pred             hccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHH
Confidence            887788888999999754 467889998888889888876654

>PRK10429 melibiose:sodium symporter; Provisional

Probab=97.81  E-value=0.00086  Score=65.22  Aligned_cols=111  Identities=15%  Similarity=0.143  Sum_probs=79.1

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcC----CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCC-chHHHHHHHHHHhh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTG----LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG-TLYPLIMAALLGIG  231 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~G~~  231 (312)
                      ..+|.++...-+..++...+.|.++||    +|||+|.++.+.+.....+.+++  ++|+.+... ..+.++.+.+++++
T Consensus        42 ~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf--~~p~~~~~~~~~~~~~~~~l~~~~  119 (473)
T PRK10429         42 GLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLF--SAHLFEGTAQYVFVCVTYILWGMT  119 (473)
T ss_pred             HHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHH--cCCCCCccHHHHHHHHHHHHHHHH
Confidence            467888888889999999999999994    57777777777777666654443  334321111 13466778889999


Q ss_pred             hhHHhhhhHhHHHHhccCChh--hhHHHHHHHHHHHHHHH
Q 021469          232 DGVLNTQLSALLGILFKHDTE--GAFAQLKVWQCASIAVV  269 (312)
Q Consensus       232 d~~~~t~~~~i~g~~~~~~~~--~afa~~~~~qs~g~ai~  269 (312)
                      ..+.++--.++..++.+|.+|  +.++.-+.+.++|..+.
T Consensus       120 ~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~  159 (473)
T PRK10429        120 YTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVT  159 (473)
T ss_pred             HHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998866554  44666577777764444

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=97.80  E-value=0.00084  Score=65.74  Aligned_cols=116  Identities=11%  Similarity=-0.066  Sum_probs=83.2

Q ss_pred             hhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhh
Q 021469          158 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT  237 (312)
Q Consensus       158 ~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t  237 (312)
                      ..+.+...+.++.++++++.|++.||+|||+ .+.++.++..++.++.... +...+....+..++.-++.|++-+....
T Consensus        57 ~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~-~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~r~l~G~~~g~~~~  134 (502)
T TIGR00887        57 VSAAVNGSASIGTLAGQLFFGWLADKLGRKR-VYGMELIIMIIATVASGLS-PGSSPKSVMATLCFWRFWLGVGIGGDYP  134 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhccHH-HHHHHHHHHHHHHHHHHHc-cCcccchHHHHHHHHHHHHHHHHhhhhH
Confidence            4577788899999999999999999999875 4445555554443332211 1111111113467788899999999999


Q ss_pred             hhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          238 QLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       238 ~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      ....++.+.+|.+. ..+.++......+|..++..+...
T Consensus       135 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~  173 (502)
T TIGR00887       135 LSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALI  173 (502)
T ss_pred             HHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998544 678999999999988887766543

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=97.77  E-value=0.0018  Score=62.20  Aligned_cols=114  Identities=9%  Similarity=0.047  Sum_probs=77.3

Q ss_pred             ccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469          155 GVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGV  234 (312)
Q Consensus       155 g~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~  234 (312)
                      +.++.|..+..+.++..+++.+.|++.||++||+ .+..+.++...+..... ..+...+  +....++..++.|++.+.
T Consensus        59 s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~-~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~l~~~~~l~g~~~g~  134 (438)
T TIGR00712        59 SKGELGFALSAISIAYGFSKFIMGSVSDRSNPRV-FLPAGLILSAAVMLLMG-FVPWATS--SIAIMFVLLFLNGWFQGM  134 (438)
T ss_pred             CHhHhHHHHHHHHHHHHHhhhccchhhhccCCce-ehHHHHHHHHHHHHHHh-ccccccc--hHHHHHHHHHHHHHHhhc
Confidence            3456888999999999999999999999999776 44455545444433221 1111000  112344556778888887


Q ss_pred             HhhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHh
Q 021469          235 LNTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFI  272 (312)
Q Consensus       235 ~~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~  272 (312)
                      ........+.+.+|+ ++..+++++....++|..++-.+
T Consensus       135 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l  173 (438)
T TIGR00712       135 GWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLL  173 (438)
T ss_pred             chHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHH
Confidence            767677778888865 45679999999888887776544

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=97.75  E-value=0.00087  Score=63.78  Aligned_cols=265  Identities=16%  Similarity=0.081  Sum_probs=126.2

Q ss_pred             ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-H--hc--cCCccc-cccchhh
Q 021469           26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-C--FL--RKEEDK-GEKETAD   99 (312)
Q Consensus        26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-l--fL--~~~~~~-~~~~~~~   99 (312)
                      +.|.....+=-...++|-.+|+++.-.+..+.++ ++...+.++..+..+.+++.+++ +  +.  ++|..+ +....+.
T Consensus       172 ~qra~A~~~~v~~n~LGvavg~llppilV~~~~~-~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~  250 (480)
T KOG2563|consen  172 DQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKD-SEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAAL  250 (480)
T ss_pred             chhhhhhhHHHhcchHHHHHHhhccceecCCCCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhh
Confidence            4455566665566678888888888766554422 22333445445555566655443 2  21  112111 1111111


Q ss_pred             cchhhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccc-cccccccc--hhhHHHHHHhHHHHHHHHH
Q 021469          100 ASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEI-VTPALGVS--GVGGAMAVYGAFDAICSLA  176 (312)
Q Consensus       100 ~~~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~-~s~~lg~~--~~g~v~~~~g~~~~ig~~~  176 (312)
                          ...+   -.+++.++++|++..+++-.  | |...+-.++.++-.- .-|.-|.+  ..|+.-+..-++.++++++
T Consensus       251 ----~~~~---f~~si~~~~~n~~F~il~~~--y-gi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~  320 (480)
T KOG2563|consen  251 ----QDAS---FPKSIKSCFKNRQFIILAIC--Y-GIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALA  320 (480)
T ss_pred             ----hcCc---HHHHHHHHHcCccHHHHHHH--H-hhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHH
Confidence                1111   34667789999998766533  2 222222222222110 00111333  3455555555667999999


Q ss_pred             HhhhhcCCCChhhHHHHHHHHHHHHH-HHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHh-ccCChhhh
Q 021469          177 AGRLTTGLPSITFIVSGGAIAQVVVF-LWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGIL-FKHDTEGA  254 (312)
Q Consensus       177 ~G~l~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~-~~~~~~~a  254 (312)
                      +|.+.||.++.+....+..... ..+ .+++..+. +  ..+.++.|....++|++-......-..+-.+. ||..++.-
T Consensus       321 ~gii~Dktk~fk~~~~v~~~~~-~v~~~~l~~~t~-~--~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tS  396 (480)
T KOG2563|consen  321 SGIIADKTKKFKLTTLVLYLFA-LVGTLMLLTCTL-F--LGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTS  396 (480)
T ss_pred             HHhhhhhhhhHHHHHHHHHHHH-HHHHHHHHHhhc-c--CCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCccc
Confidence            9999999764322222211111 111 11111111 1  11234577778888887655433323232222 56555444


Q ss_pred             HHHHH-HHHHHHHHHHHHhhhhhh-------HH--HHHHHHHHHHHHHHHHHHHhhhhhhh
Q 021469          255 FAQLK-VWQCASIAVVFFIGPYIS-------LQ--AMLIVMVVGICVALVGILFLTIQVEK  305 (312)
Q Consensus       255 fa~~~-~~qs~g~ai~f~~~~~l~-------~~--~~~~il~~~~~~~~~~~~~~~~~~~~  305 (312)
                      .++.+ +-|..|.+..+.......       ..  ........++...++.+..=++|..|
T Consensus       397 sGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~~  457 (480)
T KOG2563|consen  397 SGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRLR  457 (480)
T ss_pred             ceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhHh
Confidence            44333 345556666666654331       11  11222334555555555555555443

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=97.75  E-value=0.0025  Score=60.37  Aligned_cols=138  Identities=11%  Similarity=-0.066  Sum_probs=82.4

Q ss_pred             HHhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCC-----CChhhHHHHHHHHHHHHHHHH
Q 021469          131 FAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL-----PSITFIVSGGAIAQVVVFLWI  205 (312)
Q Consensus       131 ~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~-----~~~~~~~~~~~~~~~~~~~~~  205 (312)
                      .+-.|+-.+|..+..|.-+-+.-+..+++|.+....-.  .+...+.|.+.||+     +||++.+.++.+....+...+
T Consensus         8 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l   85 (402)
T PRK11902          8 GFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAM   85 (402)
T ss_pred             HHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHH
Confidence            34455555555543332222222334577777554443  68889999999998     666655555555554444433


Q ss_pred             HhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhh
Q 021469          206 LINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~  274 (312)
                      .. .+++.+   .+..+++.++.+++.+..+....+++.+..|++ +..+.++...-.++|..++-.+..
T Consensus        86 ~~-~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~  151 (402)
T PRK11902         86 AF-CPPHAA---LWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLAL  151 (402)
T ss_pred             Hh-cCccch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHH
Confidence            32 222211   233566667788888888888888999988765 456677766656666666555443

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=97.74  E-value=0.00027  Score=68.37  Aligned_cols=114  Identities=9%  Similarity=-0.008  Sum_probs=84.0

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ...|.++..+.++.++++++.|++.||+++|+ .+..+.++......+......++     ....++..++.|++.+...
T Consensus        76 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~-~l~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~r~~~G~~~~~~~  149 (465)
T TIGR00894        76 ALQGLILSSHFYGQIIIQIPVGYLAGKYVFKW-SIGIGMFLSSVISIVIPWAAGGG-----IALVVFCRVIQGLAQGSVS  149 (465)
T ss_pred             HHhhHHHHHHHHHHHHHHcchHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHcC-----chHHHHHHHHHHHhcccch
Confidence            45678888899999999999999999999776 44444444332222211111111     2346778899999999999


Q ss_pred             hhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          237 TQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       237 t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      .....++.+.+|+ ++..+.++......+|..++..+.+.+
T Consensus       150 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l  190 (465)
T TIGR00894       150 PATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWL  190 (465)
T ss_pred             hhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999974 456889999998999999888877654

>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]

Probab=97.71  E-value=9.8e-06  Score=76.97  Aligned_cols=114  Identities=15%  Similarity=0.156  Sum_probs=90.8

Q ss_pred             ccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469          155 GVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGV  234 (312)
Q Consensus       155 g~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~  234 (312)
                      +.++.|++-..+-+..++++.+.|+|.||++|++ ++.+|..+...+-+..-  +..     +.|...++=.+-|+|.+.
T Consensus        66 ~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~-v~~vG~~iW~~Av~~~~--fs~-----~Fwq~~l~R~~vGiGeAs  137 (493)
T KOG1330|consen   66 SDSELGLLQTVFIVVFMIASPLFGYLADRYNRKR-VIAVGIFIWTLAVFASG--FSN-----HFWQVLLCRGFVGIGEAS  137 (493)
T ss_pred             CchhccchhHHHHHHHHHHHHHHHHHHhhcCcce-EEeeHHHHHHHHHHHHH--HHH-----HHHHHHHHHHHhccchhh
Confidence            4456778888899999999999999999998764 66667666554433221  111     135577889999999999


Q ss_pred             HhhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          235 LNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       235 ~~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ..+..+.++++.||+++ .+.++++++.-..|+.++|.++..+
T Consensus       138 ~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~v  180 (493)
T KOG1330|consen  138 YSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVV  180 (493)
T ss_pred             hcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeee
Confidence            99999999999998654 7899999999999999999988864

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=97.71  E-value=0.0035  Score=62.53  Aligned_cols=153  Identities=12%  Similarity=0.123  Sum_probs=88.4

Q ss_pred             HHhhcChhh-HHHHHHHHhhhhHhhhhh-hcccccc----cccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhh
Q 021469          116 TTLLADVRM-LLIIPLFAYSGLQQAFVW-AEFTKEI----VTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITF  189 (312)
Q Consensus       116 ~~~~~~~~~-lll~p~~~~~G~~~~f~~-~~~~~~~----~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~  189 (312)
                      .++++|+|. -..+...+..|+.. |.. ..+|+..    .++..+....++....++++..+|+.+.|.+..++++-++
T Consensus       303 ~~Lf~~~r~~~~~lvi~fi~G~~~-~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw  381 (599)
T PF06609_consen  303 HRLFKDRRGFAALLVISFISGMNF-FSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKW  381 (599)
T ss_pred             HHHhccchHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhH
Confidence            468888664 33333444455431 111 2334332    2333233346677778899999999999998877765455


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHH
Q 021469          190 IVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAV  268 (312)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai  268 (312)
                      .++++.++.......+. ...++..  ..  .....++-|++-+........+.....|++. ..+.++.-.+.++|.++
T Consensus       382 ~li~~~~~~ta~~Gama-~~~~~n~--~~--~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsI  456 (599)
T PF06609_consen  382 QLIFGSVLMTAFCGAMA-AVRPDNK--NA--AIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSI  456 (599)
T ss_pred             HHHHHHHHHHHHHHHHH-HccCCCc--ch--HHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHH
Confidence            65566655543323222 2333321  12  3344556666666655555555444456544 67899999999999999


Q ss_pred             HHHhhh
Q 021469          269 VFFIGP  274 (312)
Q Consensus       269 ~f~~~~  274 (312)
                      ++.+..
T Consensus       457 g~aIy~  462 (599)
T PF06609_consen  457 GYAIYN  462 (599)
T ss_pred             HHHHHH
Confidence            988754

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=97.70  E-value=0.0015  Score=63.63  Aligned_cols=110  Identities=11%  Similarity=0.024  Sum_probs=73.9

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      .+.+.+...+.++..++.++.|.+.||++||+ .+..+.++.....++.  .+.++     ++..++..++.|++.+.+.
T Consensus        71 ~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~-~~~~~~~~~~~~~~~~--~~~~s-----~~~l~~~r~l~G~~~~~~~  142 (476)
T PLN00028         71 SDIGNAGIASVSGSIFSRLAMGPVCDLYGPRY-GSAFLLMLTAPAVFCM--SLVSS-----ATGFIAVRFFIGFSLATFV  142 (476)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHH--HHhcC-----HHHHHHHHHHHHHHHHhhH
Confidence            45677777888889999999999999999876 4344444443333222  12222     2335566788888887654


Q ss_pred             hhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          237 TQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       237 t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      . ....+++.+|+ ++..+.++......+|..++..+.+.
T Consensus       143 ~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~  181 (476)
T PLN00028        143 S-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPL  181 (476)
T ss_pred             H-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3 44467788875 45678999988888888877665553

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=97.69  E-value=0.0017  Score=61.14  Aligned_cols=111  Identities=7%  Similarity=0.017  Sum_probs=75.6

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhh---HHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhh
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITF---IVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD  232 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d  232 (312)
                      ...+|.++.++.+...+++.+.|++.||++|+..   .+.++..+  .  .+.+....++     .+..++..++.|++.
T Consensus        38 ~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~--~--~~~~~~~~~~-----~~~l~i~~~l~g~~~  108 (382)
T PRK11128         38 PETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLL--F--AVAFWFGAHS-----FWLLFVAIGLFNLFF  108 (382)
T ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHH--H--HHHHHHhccc-----HHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999986421   22111111  1  1111112111     244566777788888


Q ss_pred             hHHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          233 GVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       233 ~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      +..+....++... ++++++++++..|...++|.+++-.+...+
T Consensus       109 ~~~~~~~~a~~~~-~~~~~~~a~~~~~~~~~lg~~igp~lgg~l  151 (382)
T PRK11128        109 SPLVPLTDALANT-WQKQIGLDYGKVRLWGSIAFVIGSALTGKL  151 (382)
T ss_pred             cccccHHHHHHHH-HHhhccCCcchHHHHHHHHHHHHHHHHHHH
Confidence            8777776666554 455566789999999999988888887765

>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]

Probab=97.67  E-value=0.00022  Score=66.82  Aligned_cols=134  Identities=15%  Similarity=0.164  Sum_probs=97.2

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHH-HHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQV-VVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      .++|.+.+++.+.|.+.+-+.|++.||++.|.|+ ++|..+.. .+.++.+   ..+     ++..++.-.+-|+++++.
T Consensus       106 ~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm-~~Gl~vmf~sTilFaf---g~s-----y~~l~vAR~LQgvgsA~~  176 (464)
T KOG3764|consen  106 TQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPM-VAGLFVMFLSTILFAF---GNS-----YPMLFVARSLQGVGSAFA  176 (464)
T ss_pred             cchhHHHHHHHHHHHHhcccchhhHHHhccccHH-HHHHHHHHHHHHHHHH---cch-----hHHHHHHHHHhhhhHHHH
Confidence            4689999999999999999999999999977655 45554432 2222222   111     245889999999999999


Q ss_pred             hhhhHhHHHHhccCChh--hhHHHHHHHHHHHHHHHHHhhhhh----hHHHHHHHHHHHHHHHHHHHHHh
Q 021469          236 NTQLSALLGILFKHDTE--GAFAQLKVWQCASIAVVFFIGPYI----SLQAMLIVMVVGICVALVGILFL  299 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~~~--~afa~~~~~qs~g~ai~f~~~~~l----~~~~~~~il~~~~~~~~~~~~~~  299 (312)
                      .|.--+++++.||||.|  +++++.-.+-++|.-++--+.+.+    .-++.+.++.+++++..+.-+.+
T Consensus       177 ~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~v  246 (464)
T KOG3764|consen  177 DTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLV  246 (464)
T ss_pred             HhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHhe
Confidence            99999999999998874  567777777777766665555543    33456778886666655554444

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=97.66  E-value=0.002  Score=60.68  Aligned_cols=114  Identities=11%  Similarity=-0.028  Sum_probs=73.0

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      ..++|+++..+.+...+++.+.|.+.||++|+.....+..+... .+...+..+.++     .+..++..++.|.+.+..
T Consensus        38 ~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~-----~~~l~~~~~l~~~~~~~~  111 (382)
T TIGR00902        38 EEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASA-IFAAAFSAGAHN-----AWLLFIAIGLFALFFSAG  111 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH-HHHHHHHHhhhh-----HHHHHHHHHHHHHHHccc
Confidence            46789999999999999999999999998864322111111111 111111112222     234555666677777666


Q ss_pred             hhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          236 NTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      .....++.. .+++++.++++..|.+.++|.+++-.+...+
T Consensus       112 ~p~~~al~~-~~~~~~~~~~g~~~~~~slG~~~g~~l~g~l  151 (382)
T TIGR00902       112 MPIGDALAN-TWQKQFGLDYGKVRLIGSAAFIIGSALFGGL  151 (382)
T ss_pred             hhHHHHHHH-HHHHHcCCCccHHHHHHHHHHHHHHHHHHHH
Confidence            666666654 3455556789999999999988888766654

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>PRK09848 glucuronide transporter; Provisional

Probab=97.63  E-value=0.0024  Score=61.45  Aligned_cols=118  Identities=14%  Similarity=0.235  Sum_probs=72.2

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCC----CChhhHHHHHHHHHHHHHHHHHhcccCCCCC-CCchHHHHHHHHHHhh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGL----PSITFIVSGGAIAQVVVFLWILINYSVTSGV-LGTLYPLIMAALLGIG  231 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~  231 (312)
                      ..+|.++.+..+..++...+.|.+.||.    |||++.+..+.+.......+++. .+.+.+. ....+.++...+++.+
T Consensus        44 ~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  122 (448)
T PRK09848         44 AAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFW-VPTDWSHSSKVVYAYLTYMGLGLC  122 (448)
T ss_pred             HHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHh-CcCCCCcchHHHHHHHHHHHHHHH
Confidence            4678999999999999999999999975    56666655665555444333321 1211111 1123456677888999


Q ss_pred             hhHHhhhhHhHHHHhccCChhh-hHHHHHH-HHHH-HHHHHHHhhhh
Q 021469          232 DGVLNTQLSALLGILFKHDTEG-AFAQLKV-WQCA-SIAVVFFIGPY  275 (312)
Q Consensus       232 d~~~~t~~~~i~g~~~~~~~~~-afa~~~~-~qs~-g~ai~f~~~~~  275 (312)
                      .++.++-..++...+.+|++|+ ..+..|. ..++ +..++..+.+.
T Consensus       123 ~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~  169 (448)
T PRK09848        123 YSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPS  169 (448)
T ss_pred             HHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999887777777776664432 3333443 2233 23344444443

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=97.62  E-value=0.0011  Score=64.20  Aligned_cols=111  Identities=12%  Similarity=0.059  Sum_probs=73.4

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHH-HHHHHhhhhHH
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM-AALLGIGDGVL  235 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~G~~d~~~  235 (312)
                      ...+++...+.+...+++.+.|++.||++||+ .++.+.++.....++.  .+.++     .+..++. .++.|++.+..
T Consensus        54 ~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~-~l~~~~~~~~~~~~~~--~~~~~-----~~~l~~~~~~l~G~~~~~~  125 (455)
T TIGR00892        54 SETAWISSIMLAVLYAGGPISSILVNRFGCRP-VVIAGGLLASLGMILA--SFSSN-----VIELYLTAGFITGLGLAFN  125 (455)
T ss_pred             hHHHHHHHHHHHHHHHhhHHHHHHHHHcCchH-HHHhhHHHHHHHHHHH--HHhhh-----HHHHHHHHHHHHHhcchhh
Confidence            45667777777777888999999999999776 4445554444333322  12222     1222333 36778888765


Q ss_pred             hhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          236 NTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      ......++...+++++..+.++.....++|.+++-.+.+.
T Consensus       126 ~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~  165 (455)
T TIGR00892       126 FQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQY  165 (455)
T ss_pred             hhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHH
Confidence            5556677788888777788999998888888777555543

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=97.61  E-value=0.0026  Score=59.98  Aligned_cols=111  Identities=14%  Similarity=0.022  Sum_probs=76.3

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      +++|++...+.++..++++..|.+.||++||+ +............. .. ...++     .....+.-++.|++.+...
T Consensus        26 ~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~-~~~~~~~~~~~~~~-~~-~~~~~-----~~~l~~~R~l~G~g~~~~~   97 (368)
T TIGR00903        26 EELGLLAITYPAAFLALTIPSGLLLDRAFKRW-FLFGSLATFAAAAG-RL-LDPFN-----YEWLLACQLLAALGQPFLL   97 (368)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHccchH-HHHHHHHHHHHHHH-HH-HHhcc-----HHHHHHHHHHHHhHhHHHH
Confidence            46788888899999999999999999999765 43333222222211 11 11122     2346677788898888653


Q ss_pred             hhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          237 TQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       237 t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                       .....+.+.+|+ ++..+.++.....++|..++..+.+.+
T Consensus        98 -~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l  137 (368)
T TIGR00903        98 -NAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKI  137 (368)
T ss_pred             -HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             334445777764 446889999999999999998887765

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=97.58  E-value=0.0025  Score=56.77  Aligned_cols=135  Identities=16%  Similarity=0.078  Sum_probs=88.5

Q ss_pred             hhhhhhcccccccccccccc--hhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCC
Q 021469          138 QAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGV  215 (312)
Q Consensus       138 ~~f~~~~~~~~~~s~~lg~~--~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (312)
                      ..|-.+.|..++- ..+|.+  ++..+-.+-.++..+ +++.|.+.|++|.+. +..+|.+.+...|.++.......-+.
T Consensus        17 t~Y~Fs~yS~~Lk-~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~-~l~iG~~~~~~GY~~~~l~~~~~i~~   93 (250)
T PF06813_consen   17 TTYTFSAYSPQLK-SRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWV-VLLIGAVLGFVGYGLLWLAVSGRIPS   93 (250)
T ss_pred             cccchhhhhHHHH-HHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHH-HHHHHHHHHHHHHHHHHHHHhCccCc
Confidence            3444456665553 223433  344444455556655 688899999998664 56788888888887665433221111


Q ss_pred             CCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          216 LGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       216 ~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      ...|...+..++-|.+.+..+|-.....-.-||+++..+.++.|.+..+++++-..+..-
T Consensus        94 ~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~  153 (250)
T PF06813_consen   94 LPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSA  153 (250)
T ss_pred             cchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHH
Confidence            112344455556667777778877777778899999899999999999999987766443

>TIGR00901 2A0125 AmpG-related permease

Probab=97.57  E-value=0.003  Score=58.56  Aligned_cols=113  Identities=10%  Similarity=-0.062  Sum_probs=70.1

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCC-----CChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGL-----PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG  231 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~  231 (312)
                      +++|+.... ++...+ ..+.|.+.||+     |||++.++.+.++...+...+. ..++..   +.+..+...++.+++
T Consensus        23 ~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~-~~~~~~---~l~~l~~~~~~~~~~   96 (356)
T TIGR00901        23 KTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILS-FLVPST---DLPLLAGLAFLIAFF   96 (356)
T ss_pred             HHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHH-cCCcch---hHHHHHHHHHHHHHH
Confidence            345555432 333344 88999999987     6666555555555544433222 222221   123466777788899


Q ss_pred             hhHHhhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          232 DGVLNTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       232 d~~~~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      .+.......+++.+.+|+ ++..+.++.....++|..++-.+...
T Consensus        97 ~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~  141 (356)
T TIGR00901        97 SATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALV  141 (356)
T ss_pred             HHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence            988888888899998864 44567777666666666666555543

>PRK09669 putative symporter YagG; Provisional

Probab=97.56  E-value=0.0026  Score=61.16  Aligned_cols=114  Identities=20%  Similarity=0.160  Sum_probs=78.1

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcC----CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCC-chHHHHHHHHHHhh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTG----LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG-TLYPLIMAALLGIG  231 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~G~~  231 (312)
                      ..+|.++.+.-+..++...+.|.+.||    +|||+|.++.+.+.....+.+.+  +.|+.+..+ ..+.++.+.+++.+
T Consensus        45 ~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f--~~p~~~~~~~~~~~~~~~~l~~~~  122 (444)
T PRK09669         45 AIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTF--YTPDFGATGKIIYACVTYILLSLV  122 (444)
T ss_pred             HHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHH--hCCCCCcchHHHHHHHHHHHHHHH
Confidence            467888888888999999999999997    56667776667666655544333  344322111 23566778888888


Q ss_pred             hhHHhhhhHhHHHHhccCChhh--hHHHHHHHHHHHHHHHHHh
Q 021469          232 DGVLNTQLSALLGILFKHDTEG--AFAQLKVWQCASIAVVFFI  272 (312)
Q Consensus       232 d~~~~t~~~~i~g~~~~~~~~~--afa~~~~~qs~g~ai~f~~  272 (312)
                      .++.+.-..++.+++.+|++|+  ..+.......+|..++-.+
T Consensus       123 ~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~  165 (444)
T PRK09669        123 YTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVI  165 (444)
T ss_pred             HHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8888887778888887665543  4566666667776666543

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=97.45  E-value=2.3e-07  Score=89.09  Aligned_cols=109  Identities=14%  Similarity=0.075  Sum_probs=59.2

Q ss_pred             HHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHH--hcccCCCC-CCCchHHHHHHHHH-HhhhhHHhhhhH
Q 021469          165 VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL--INYSVTSG-VLGTLYPLIMAALL-GIGDGVLNTQLS  240 (312)
Q Consensus       165 ~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~l~-G~~d~~~~t~~~  240 (312)
                      ..++.+.++.++...+.||+|||+ +.+.+......+...+.  ..+.++.+ ..+. ...+...++ ......+....+
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~GRr~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~l~~~~~~~g~~~~~~  371 (451)
T PF00083_consen  294 ILGLVNFLGTLLAIFLIDRFGRRK-LLIIGLLLMAICSLILGIIFFLGVSSSSWWSI-LSIVFLALFFAFFSLGWGPLPW  371 (451)
T ss_pred             cccccccccccccccccccccccc-cccccccccccccccccccccccccccccccc-ccceeeeecccccccccccccc
Confidence            445667777778778999999875 54455544443333221  11112221 1111 111111122 223335556666


Q ss_pred             hHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          241 ALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       241 ~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      .+.++.||.+ +..+.++......++..++-.+.+.
T Consensus       372 ~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~  407 (451)
T PF00083_consen  372 IYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPY  407 (451)
T ss_pred             cccccccccccccccccccccccccccccccccccc
Confidence            7778999854 4567777777777777766555554

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>PRK15011 sugar efflux transporter B; Provisional

Probab=97.43  E-value=0.01  Score=56.09  Aligned_cols=148  Identities=11%  Similarity=-0.003  Sum_probs=72.5

Q ss_pred             ChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHH
Q 021469          121 DVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQ  198 (312)
Q Consensus       121 ~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~  198 (312)
                      |++...++-..+.+++..++.....+-.+ .+.+|  ...+|.......+...+.+.+.|.+.||+++|+.++..+.+..
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l-~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~   92 (393)
T PRK15011         14 DLTSTAFLIVAFLTGIAGALQTPTLSIFL-TDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLG   92 (393)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHH-HhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHH
Confidence            44444444445666665554433222111 12223  3567777655555444444444444899988765544443332


Q ss_pred             HHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-h--hhHHHHHHHHHHHHHHHHHhhhh
Q 021469          199 VVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-E--GAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~--~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      .....+.  .+.++     .+..+++..+.|...+........+..+..+++. +  ...+..+...++|..++-.+...
T Consensus        93 ~~~~~~~--~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~  165 (393)
T PRK15011         93 VLACTLF--AWNRN-----YFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYA  165 (393)
T ss_pred             HHHHHHH--HHhhH-----HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence            2221111  12111     1223344444444444555556666655444322 2  12356777777888877777665


Q ss_pred             h
Q 021469          276 I  276 (312)
Q Consensus       276 l  276 (312)
                      +
T Consensus       166 l  166 (393)
T PRK15011        166 L  166 (393)
T ss_pred             H
Confidence            4

>TIGR00883 2A0106 metabolite-proton symporter

Probab=97.41  E-value=0.0021  Score=59.55  Aligned_cols=103  Identities=9%  Similarity=-0.052  Sum_probs=67.5

Q ss_pred             HHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCc---hHHHHHHHHHHhhhhHHhhhhHhHHHH
Q 021469          169 FDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGT---LYPLIMAALLGIGDGVLNTQLSALLGI  245 (312)
Q Consensus       169 ~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~G~~d~~~~t~~~~i~g~  245 (312)
                      ...+++.+.|++.||++||+ .+.++.++.........  +.++-+....   ...++..++.|++.+......+.++.+
T Consensus        47 ~~~i~~~~~G~l~dr~g~r~-~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~  123 (394)
T TIGR00883        47 ARPLGAIVFGHFGDRIGRKK-TLVITLLMMGIGTLLIG--LLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAE  123 (394)
T ss_pred             HhhhHHHHhhhhhhhhhhHH-HHHHHHHHHHHHHHHHh--hCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhh
Confidence            34578899999999999776 44566555544433222  2122110001   135566788999998888888889999


Q ss_pred             hccC-ChhhhHHHHHHHHHHHHHHHHHhhh
Q 021469          246 LFKH-DTEGAFAQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       246 ~~~~-~~~~afa~~~~~qs~g~ai~f~~~~  274 (312)
                      .+++ ++..+.+.......+|..++-.+..
T Consensus       124 ~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~  153 (394)
T TIGR00883       124 YAPPGKRGFYGSFQQVGAPVGLLLAALTVL  153 (394)
T ss_pred             cCCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            8865 4456788888877788777665543

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=97.40  E-value=0.0042  Score=59.54  Aligned_cols=107  Identities=9%  Similarity=-0.080  Sum_probs=69.1

Q ss_pred             HHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCC---CchHHHHHHHHHHhhhhHHhhhhH
Q 021469          164 AVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVL---GTLYPLIMAALLGIGDGVLNTQLS  240 (312)
Q Consensus       164 ~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~G~~d~~~~t~~~  240 (312)
                      ....++..+|+++.|.+.||+|||+ .+..+.++....-+...  ..|+-...   .+....+.-++.|++.+.......
T Consensus        70 ~~~~~~~~ig~~~~G~l~Dr~Grr~-~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~  146 (432)
T PRK10406         70 AAGFLMRPIGGWLFGRIADKHGRKK-SMLISVCMMCFGSLVIA--CLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSA  146 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcHH-HHHHHHHHHHHHHHHHh--hcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHH
Confidence            3344556699999999999999876 44455444433222211  11221100   012356677899999998888888


Q ss_pred             hHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhh
Q 021469          241 ALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIG  273 (312)
Q Consensus       241 ~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~  273 (312)
                      .++.+.+|+++ ..+.+........|..++..+.
T Consensus       147 ~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~  180 (432)
T PRK10406        147 TYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVV  180 (432)
T ss_pred             HHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence            99999987544 5677777777777777776543

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=97.39  E-value=0.0083  Score=58.01  Aligned_cols=114  Identities=20%  Similarity=0.160  Sum_probs=78.1

Q ss_pred             hhhHHHHHHhHHHHHHHHHHhhhhcC----CCChhhHHHHHHHHHHHHHHHHHhcccCCCCC-CCchHHHHHHHHHHhhh
Q 021469          158 GVGGAMAVYGAFDAICSLAAGRLTTG----LPSITFIVSGGAIAQVVVFLWILINYSVTSGV-LGTLYPLIMAALLGIGD  232 (312)
Q Consensus       158 ~~g~v~~~~g~~~~ig~~~~G~l~d~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~d  232 (312)
                      .+|.+..+-=+-.++.-.++|.+.||    +|||+|-++.+.+.......+.+  ++|+.+. ....++++.+++|+++.
T Consensus        49 ~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F--~~p~~~~~~k~~ya~vtY~l~~l~Y  126 (467)
T COG2211          49 LAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLF--ITPDFSMTGKLIYALVTYMLLGLGY  126 (467)
T ss_pred             HHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHH--cCCCcccCcchHHHHHHHHHHHHHH
Confidence            45555556666688888899999995    56777777778777665555443  4454321 22357899999999999


Q ss_pred             hHHhhhhHhHHHHhccCChhhh--HHHHHHHHHHHHHHHHHhh
Q 021469          233 GVLNTQLSALLGILFKHDTEGA--FAQLKVWQCASIAVVFFIG  273 (312)
Q Consensus       233 ~~~~t~~~~i~g~~~~~~~~~a--fa~~~~~qs~g~ai~f~~~  273 (312)
                      +..|.--.++.+.+.+|.+|++  .+.-...-++|..+.....
T Consensus       127 T~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~  169 (467)
T COG2211         127 TLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLF  169 (467)
T ss_pred             HheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9998888888888888776643  4455555555545555544

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=97.38  E-value=0.0015  Score=61.73  Aligned_cols=148  Identities=14%  Similarity=0.184  Sum_probs=98.9

Q ss_pred             HHHhhcChhhHHHHHHHHhhhhHhhhhhh--ccc---ccccccc-cccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChh
Q 021469          115 ITTLLADVRMLLIIPLFAYSGLQQAFVWA--EFT---KEIVTPA-LGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSIT  188 (312)
Q Consensus       115 ~~~~~~~~~~lll~p~~~~~G~~~~f~~~--~~~---~~~~s~~-lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~  188 (312)
                      +.+..+.+|++.++-++  .|+. +||..  .|+   ..+.++. +..+++|.+..++.+.-.++-+++|.++||.+.|+
T Consensus        19 ~~~~y~~~r~qif~~~f--iGYa-~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~   95 (448)
T COG2271          19 IDKTYKRWRIQIFLSIF--IGYA-AFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRY   95 (448)
T ss_pred             HHHHHHHHHHHHHHHHH--HHHH-HHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCce
Confidence            34556677777666443  3432 23321  111   1122222 34567899999999999999999999999987664


Q ss_pred             hHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHH
Q 021469          189 FIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH-DTEGAFAQLKVWQCASIA  267 (312)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~a  267 (312)
                       .+.+++++..++-++  .-+.+.     .++..++.++.|+.++.--.-++.++++.|+. ++.+..++++.-+++|.+
T Consensus        96 -fm~~gLilsai~nil--~Gfs~s-----~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGa  167 (448)
T COG2271          96 -FMAFGLILSAIVNIL--FGFSPS-----LFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGA  167 (448)
T ss_pred             -eehHHHHHHHHHHHH--HhhhhH-----HHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccc
Confidence             445666555443322  122221     13456677788888877777888899999874 446899999999999999


Q ss_pred             HHHHhh
Q 021469          268 VVFFIG  273 (312)
Q Consensus       268 i~f~~~  273 (312)
                      +.-.+.
T Consensus       168 l~~~~~  173 (448)
T COG2271         168 LAPLVA  173 (448)
T ss_pred             hHHHHH
Confidence            988777

>PF13347 MFS_2: MFS/sugar transport protein

Probab=97.37  E-value=0.00078  Score=64.49  Aligned_cols=117  Identities=15%  Similarity=0.146  Sum_probs=83.7

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhc----CCCChhhHHHHHHHHHHHHHHHHHhcccC-CCCCCC-chHHHHHHHHHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTT----GLPSITFIVSGGAIAQVVVFLWILINYSV-TSGVLG-TLYPLIMAALLGI  230 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~l~G~  230 (312)
                      ..+|.++.+..+..++...+.|.++|    |+|||+|.+.++.++...++.+++ .-+| +.+... ..+.++..+++.+
T Consensus        37 ~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf-~~~p~~~~~~~~~~~~~~~~~l~~~  115 (428)
T PF13347_consen   37 ALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLF-SPPPAGLSFTAKLVWLFVFYILFDI  115 (428)
T ss_pred             HHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhh-ccccchhhhhhHHHHHHHHHHHHHH
Confidence            45677888788888888889999999    678888888888888777766554 2213 211111 1346788888899


Q ss_pred             hhhHHhhhhHhHHHHhccCCh--hhhHHHHHHHHHHHHHHHHHhhh
Q 021469          231 GDGVLNTQLSALLGILFKHDT--EGAFAQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       231 ~d~~~~t~~~~i~g~~~~~~~--~~afa~~~~~qs~g~ai~f~~~~  274 (312)
                      +-.+.+....++..++.+|++  .+..+.-+.+..+|..+...+.+
T Consensus       116 ~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~  161 (428)
T PF13347_consen  116 AYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAP  161 (428)
T ss_pred             hhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhh
Confidence            999999988899999887644  35566777778888865555444

>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]

Probab=97.37  E-value=0.0034  Score=56.70  Aligned_cols=101  Identities=20%  Similarity=0.259  Sum_probs=67.0

Q ss_pred             HHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHH-hcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHH
Q 021469          165 VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL-INYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALL  243 (312)
Q Consensus       165 ~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~  243 (312)
                      +|+++ .+.+-+.|.+.|+.|++...+..+++..+.+=..++ -.+.          ++.-..++|...+..--...-.+
T Consensus       309 vy~Is-av~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~ls----------Py~~m~~lGLsysllAcslWP~v  377 (459)
T KOG4686|consen  309 VYGIS-AVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFLS----------PYTSMTFLGLSYSLLACSLWPCV  377 (459)
T ss_pred             hhhhh-hhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhcc----------HHHHHHHHhhhHHHHHHHHhhhh
Confidence            45554 455667789999998764333334333333322221 1221          56677788888877655555577


Q ss_pred             HHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          244 GILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       244 g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      +.+-||+. ..+++..+.+|++|-++.-.+...+
T Consensus       378 a~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i  411 (459)
T KOG4686|consen  378 ASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFI  411 (459)
T ss_pred             hhhCCHHHhcchHHHHHHHHhhhhhHHhhhhhee
Confidence            77777655 6899999999999999999887764

>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.31  E-value=0.0063  Score=61.63  Aligned_cols=112  Identities=18%  Similarity=0.234  Sum_probs=72.9

Q ss_pred             eeecccchhhhhhcCCCcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCc-------CCCC------chhhHHHHH
Q 021469            7 TYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG-------STSG------TTLLFIVFL   73 (312)
Q Consensus         7 ~Ylt~~s~~~~~~~~~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~-------~~~~------~~~~~~if~   73 (312)
                      +|+.++..+          ++-..|.|+.+++..+|.++|=++..+.++...+.       ....      .+.=|++..
T Consensus       260 sYiDDnvk~----------~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g  329 (735)
T KOG3626|consen  260 SYIDDNVKK----------KNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICG  329 (735)
T ss_pred             ccccccccc----------cCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHH
Confidence            689888875          68899999999999999999999998887543222       1111      123366666


Q ss_pred             HHHHHHHHHHHhccCCcccc------cc-----chh---hcchhhhhHHHHHHHHHHHhhcChhhHHHH
Q 021469           74 GVITLGTILMCFLRKEEDKG------EK-----ETA---DASVNFYSYLVSLSKSITTLLADVRMLLII  128 (312)
Q Consensus        74 ~i~~~g~~l~lfL~~~~~~~------~~-----~~~---~~~~~~~~s~~~~~~~~~~~~~~~~~lll~  128 (312)
                      ++..+..+.++++|+..+..      ++     +++   +.+....+.+++-.+.++++++||-..+.+
T Consensus       330 ~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~  398 (735)
T KOG3626|consen  330 ALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVV  398 (735)
T ss_pred             HHHHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHH
Confidence            66777777778887632211      11     111   111122346778888888899999864443

>TIGR00805 oat sodium-independent organic anion transporter

Probab=97.31  E-value=0.0023  Score=64.69  Aligned_cols=120  Identities=19%  Similarity=0.142  Sum_probs=84.5

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHH-HHHHHHHHhc-----ccCC-------------CCC-
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQ-VVVFLWILIN-----YSVT-------------SGV-  215 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~-------------~~~-  215 (312)
                      ....|.+...+.++..++.++.|++.||.+||+.+ .++.++. +.+++..+.+     +.++             .+. 
T Consensus        67 s~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i-~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c  145 (633)
T TIGR00805        67 TSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVI-GIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLC  145 (633)
T ss_pred             CCcceeeeehhhHHHHHHHHHHHHhhcccCcceEE-EecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccc
Confidence            34578888899999999999999999999877644 3343333 3333222211     1000             000 


Q ss_pred             --------------------C--C-c-hHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHH
Q 021469          216 --------------------L--G-T-LYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVF  270 (312)
Q Consensus       216 --------------------~--~-~-~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f  270 (312)
                                          .  . + ...++.-++.|++.+...+....++.+.+|++ +..+.+++.....+|.++++
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~  225 (633)
T TIGR00805       146 MENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGY  225 (633)
T ss_pred             cCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHH
Confidence                                0  0 1 23457889999999999999999999988754 46789999999999999999


Q ss_pred             Hhhhhh
Q 021469          271 FIGPYI  276 (312)
Q Consensus       271 ~~~~~l  276 (312)
                      .+.+.+
T Consensus       226 llgg~l  231 (633)
T TIGR00805       226 LLGSFC  231 (633)
T ss_pred             HHHHHH
Confidence            987754

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=97.31  E-value=0.00016  Score=59.69  Aligned_cols=38  Identities=26%  Similarity=0.567  Sum_probs=34.3

Q ss_pred             CCCcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCC
Q 021469           21 KLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK   58 (312)
Q Consensus        21 ~~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~   58 (312)
                      ..++|++++|++|+||+++++|+++||++.+++++.++
T Consensus       116 ~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~~~~  153 (156)
T PF05978_consen  116 SYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQGQT  153 (156)
T ss_pred             HcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            35678899999999999999999999999999988654

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]

Probab=97.31  E-value=0.0057  Score=60.20  Aligned_cols=112  Identities=13%  Similarity=0.084  Sum_probs=89.1

Q ss_pred             hhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhh
Q 021469          158 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT  237 (312)
Q Consensus       158 ~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t  237 (312)
                      +.+.+...+.++..+|+++.|++.|++|||+ .++++.++..+.+++...  .++     .....+.-++.|+|-+..+.
T Consensus        90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~-~l~~~~~~~~iG~ii~~~--a~~-----~~~l~~GR~l~G~g~G~~~~  161 (513)
T KOG0254|consen   90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKK-TLLLAVVLFLIGAIIIAL--APS-----WYQLIVGRILTGLGVGGASV  161 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH-HHHHHHHHHHHHHHHHHH--hhh-----HHHHHHHHHHhccchhhhhh
Confidence            3478888999999999999999999999875 556777776666655432  222     24577889999999999999


Q ss_pred             hhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhhh
Q 021469          238 QLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYIS  277 (312)
Q Consensus       238 ~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l~  277 (312)
                      .....+++..|. .+....+.+.+....|..+++.++...+
T Consensus       162 ~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~  202 (513)
T KOG0254|consen  162 LAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTS  202 (513)
T ss_pred             cchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence            999899998876 4466788899999999999988877663

>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]

Probab=97.29  E-value=0.024  Score=55.72  Aligned_cols=43  Identities=16%  Similarity=0.142  Sum_probs=31.2

Q ss_pred             hHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHH
Q 021469          160 GGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL  203 (312)
Q Consensus       160 g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~  203 (312)
                      -...+..++.++++..+...+.||++||. +++.+......+.+
T Consensus       332 ~~~~~~~~~v~~~~t~~~~~lvd~~gRr~-lll~s~~~m~~~~~  374 (513)
T KOG0254|consen  332 FLASIILGVVNFLGTLVATYLVDRFGRRK-LLLFGAAGMSICLV  374 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHhHHHHHHHHH
Confidence            34456788889999999999999998775 55566555554444

>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]

Probab=97.20  E-value=0.0068  Score=59.58  Aligned_cols=130  Identities=12%  Similarity=-0.010  Sum_probs=86.1

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ........++-++..+|+++.|.+.||+|||. +++++.++....-+..  .+.++     .+...+.-++-|++.+...
T Consensus       118 ~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~-~~~~~~~~~~i~~~~~--a~a~~-----~~~~~~~Rfl~G~~~~~~~  189 (521)
T KOG0255|consen  118 TLVALGQSLFFLGVLVGSLIFGPLSDRFGRKP-VLLVSLLLFIIFGILT--AFAPN-----YWMFLIFRFLSGFFGSGPL  189 (521)
T ss_pred             hHHHHHHHHHHHHHHHHHhhheehHhhcccHH-HHHHHHHHHHHHHHHH--HHhCc-----HHHHHHHHHHHHhhccchh
Confidence            34556667788899999999999999999775 5556655554333221  23333     3457889999999999999


Q ss_pred             hhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhhhHHHH--HHHHHHHHHHHHHH
Q 021469          237 TQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYISLQAM--LIVMVVGICVALVG  295 (312)
Q Consensus       237 t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l~~~~~--~~il~~~~~~~~~~  295 (312)
                      +..+.++.+..+. .+..+.+. ......+..++..+..++...|+  .++.....++.++.
T Consensus       190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~  250 (521)
T KOG0255|consen  190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLL  250 (521)
T ss_pred             HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence            9999999998754 44455555 56666666666666666543443  44444444434333

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=97.16  E-value=0.0054  Score=59.21  Aligned_cols=140  Identities=24%  Similarity=0.285  Sum_probs=91.8

Q ss_pred             HHhHHHHHHHHHHhhhhcCC-CChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHH
Q 021469          165 VYGAFDAICSLAAGRLTTGL-PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALL  243 (312)
Q Consensus       165 ~~g~~~~ig~~~~G~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~  243 (312)
                      .|+..--+..+++|++.||+ |+|+.+ ++|.++..+..+.+.  .+...   .+...++-.++.++|.+.+...+.+++
T Consensus        69 ~y~slVY~t~i~GG~laDr~LG~~~tI-~lGail~~iGh~~L~--~~~~~---~~~gl~i~L~~I~iG~Gl~K~NiS~ll  142 (498)
T COG3104          69 AYGSLVYLTPIIGGWLADRVLGTRRTI-VLGAILMAIGHLVLA--ISSVS---GPGGLYIGLALIIVGTGLFKPNISSLL  142 (498)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcchhHHH-HHHHHHHHHHHHHHh--ccccc---cccHHHHHHHHHHhccccccccHHHHH
Confidence            45555556778889999996 766645 466666655554432  33211   123467777788899999999999999


Q ss_pred             HHhccCCh---hhhHHHHHHHHHHHHHHHHHhhhhhhHHH----HHHHHHHHHHHHHHHHHHhhhhhhhccCCC
Q 021469          244 GILFKHDT---EGAFAQLKVWQCASIAVVFFIGPYISLQA----MLIVMVVGICVALVGILFLTIQVEKAFYSP  310 (312)
Q Consensus       244 g~~~~~~~---~~afa~~~~~qs~g~ai~f~~~~~l~~~~----~~~il~~~~~~~~~~~~~~~~~~~~~~~~~  310 (312)
                      |++||+++   ...|+++..--++|+.++=.+.+.+....    .+..-.+-..++++-|....++.+.+.+++
T Consensus       143 g~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~  216 (498)
T COG3104         143 GELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVP  216 (498)
T ss_pred             HHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCC
Confidence            99997433   47899999998999888887777654332    233333455566665655555554444433

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=97.10  E-value=0.24  Score=47.27  Aligned_cols=219  Identities=15%  Similarity=0.054  Sum_probs=117.8

Q ss_pred             echhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCcccc---cc----------
Q 021469           29 GSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKG---EK----------   95 (312)
Q Consensus        29 g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~---~~----------   95 (312)
                      -|..+.-=+....|..+|++++-.+.....    .....+..+=.+..+++.++.+|||+|++..   |+          
T Consensus       128 q~vts~~raa~l~g~~~s~~lgQllvs~~~----~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~~~~~  203 (412)
T PF01770_consen  128 QKVTSYTRAATLVGRFISSLLGQLLVSFGG----VSYFQLNYISLASVSLALLIALFLPMPKRSLFFHRKPPAEQDANES  203 (412)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceeccCccccccccc
Confidence            345666666777777777777765544221    1122343333455778888889999876411   00          


Q ss_pred             --chh----hc-------ch----hhhhHHHHHHHHHHHhhcChhhHHHHH--HHHhhhhH------hhhhhhccccccc
Q 021469           96 --ETA----DA-------SV----NFYSYLVSLSKSITTLLADVRMLLIIP--LFAYSGLQ------QAFVWAEFTKEIV  150 (312)
Q Consensus        96 --~~~----~~-------~~----~~~~s~~~~~~~~~~~~~~~~~lll~p--~~~~~G~~------~~f~~~~~~~~~~  150 (312)
                        |..    +.       +.    .....+++..++..+..+||+++.-.-  .+-.+|+.      |.-|..+-+    
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~----  279 (412)
T PF01770_consen  204 ESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPP----  279 (412)
T ss_pred             cccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCC----
Confidence              000    00       00    011123344444555667888754432  12223332      333322201    


Q ss_pred             ccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHH-HHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHH
Q 021469          151 TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVS-GGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLG  229 (312)
Q Consensus       151 s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G  229 (312)
                       ..-...+.|.+-+...+.++++++..|++..++.+-..+.+ +...+..++..  ...+.++     -+.+++.+++++
T Consensus       280 -~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~--lm~~t~~-----Iwv~Y~~yIif~  351 (412)
T PF01770_consen  280 -SDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLF--LMSFTGN-----IWVCYAGYIIFR  351 (412)
T ss_pred             -CCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHH--HHHHhhH-----HHHHHHHHHHHH
Confidence             10123467889898999999999999998545543222221 22222222222  2223222     367899999999


Q ss_pred             hhhhHHhhhhHhHHHHhccCCh-hhhHHHHHHHHH
Q 021469          230 IGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQC  263 (312)
Q Consensus       230 ~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~~qs  263 (312)
                      .......|....-++.--.+++ .-.|++..+.--
T Consensus       352 ~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al  386 (412)
T PF01770_consen  352 SLYMFLITIASFQIAKNLSEERYALVFGINTFVAL  386 (412)
T ss_pred             HHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHH
Confidence            9988888888877777655444 556776666533

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=97.07  E-value=0.099  Score=48.84  Aligned_cols=142  Identities=14%  Similarity=0.113  Sum_probs=89.7

Q ss_pred             HHhhcChhhHHHHHHHHhhhhHhhhhh---hcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHH
Q 021469          116 TTLLADVRMLLIIPLFAYSGLQQAFVW---AEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVS  192 (312)
Q Consensus       116 ~~~~~~~~~lll~p~~~~~G~~~~f~~---~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~  192 (312)
                      .++++||.-..+   .+|.|+...-++   +-+|+.+++.-++.++.|.......+.+++.++.+-.+.+|.+.++++.+
T Consensus       202 ~~vw~~~~aW~v---tLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~  278 (395)
T COG2807         202 RKVWRSPLAWQV---TLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVV  278 (395)
T ss_pred             cccccCchhHHH---HHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHH
Confidence            456677765544   445565444333   33666666665556678888888999999999998888887543455655


Q ss_pred             HHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHH
Q 021469          193 GGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVV  269 (312)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~  269 (312)
                      ....+....+.-. +.+| ..      ....-.+++|++.+......-.++....+|.+ ++-.+.-+.|++|--++
T Consensus       279 ~~~~~~l~G~~G~-~~~P-~~------~~~lw~~llG~G~G~~F~laL~li~~rs~~a~-~Aa~LSgmaQg~GYllA  346 (395)
T COG2807         279 LALLLMLVGLVGL-LLAP-GQ------LPILWALLLGLGQGGAFPLALTLILLRSSDAA-IAAALSGMAQGVGYLLA  346 (395)
T ss_pred             HHHHHHHHHHHHH-HHhh-hh------HHHHHHHHHhCccchHHHHHHHHHHhhcCChH-HHHHHHHHhhhhhHHHH
Confidence            5555555444322 2233 31      12222588888877766776677777665544 47788888888776554

>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]

Probab=97.04  E-value=0.17  Score=49.34  Aligned_cols=252  Identities=15%  Similarity=0.105  Sum_probs=139.3

Q ss_pred             ceeecccchhhhhhcCCCcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHH-HH
Q 021469            6 GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MC   84 (312)
Q Consensus         6 G~Ylt~~s~~~~~~~~~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l-~l   84 (312)
                      |.|.+-.|.-.+...+.+++++|....|+-.+.+..+..+|.+......+..+.      ...+.+=.+...++.+. .+
T Consensus       124 g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~------a~~f~ia~~~~~~~~~y~~~  197 (463)
T KOG2816|consen  124 GGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGI------ALVFLIAAASGILSLLYMLL  197 (463)
T ss_pred             cchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCc------hHHHHHHHHHHHHHHHHHhh
Confidence            344555555555566666678899999998888888888888888777654221      22333334444444433 35


Q ss_pred             hccCCccccccc-hhh--c--chhhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhh----cccccccccccc
Q 021469           85 FLRKEEDKGEKE-TAD--A--SVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWA----EFTKEIVTPALG  155 (312)
Q Consensus        85 fL~~~~~~~~~~-~~~--~--~~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~----~~~~~~~s~~lg  155 (312)
                      ++|++.++++++ .+.  .  .........+..+...+.=.+|+.+.+.+..++.-.....-..    .|.|.-  ...+
T Consensus       198 ~l~Esl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~--f~w~  275 (463)
T KOG2816|consen  198 FLPESLQEKERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAK--FGWN  275 (463)
T ss_pred             ccccccCccccccccccccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeee--cCcC
Confidence            666655544332 110  0  0001111223333333433456666666555554443332212    122221  1234


Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcC-CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGV  234 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~  234 (312)
                      .++.+......++.+.++.++...++.+ ++-|+ ++.+|...+.....+.-..|.++       ..|...+ .......
T Consensus       276 ~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~-~i~lGl~~~~~~~~~~af~~~~w-------~~~~~~v-~~~~~~~  346 (463)
T KOG2816|consen  276 KKEFSDLLSLVSILGIISQLLLLPLLSSILGEKR-LISLGLLSEFLQLLLFAFATETW-------MMFAAGV-VVALAGI  346 (463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-HhhHHHHHHHHHHHHHHHhccch-------hhhHHHH-HHHhhcc
Confidence            5667777777888888888888855553 45444 66788888776655433344322       2233222 2333334


Q ss_pred             HhhhhHhHHHHhc-cCChhhhHHHHHHHHHHHHHHHHHhhh
Q 021469          235 LNTQLSALLGILF-KHDTEGAFAQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       235 ~~t~~~~i~g~~~-~~~~~~afa~~~~~qs~g~ai~f~~~~  274 (312)
                      ......+..+.+- +|+...++++....+++...++-.+-.
T Consensus       347 ~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~  387 (463)
T KOG2816|consen  347 VFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYG  387 (463)
T ss_pred             hhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHH
Confidence            4466666777765 344567899999988888777665433

>PTZ00207 hypothetical protein; Provisional

Probab=97.04  E-value=0.037  Score=55.39  Aligned_cols=131  Identities=11%  Similarity=0.215  Sum_probs=81.8

Q ss_pred             HHHHhHHHHHHHHHHhhhh----cC-----CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhh
Q 021469          163 MAVYGAFDAICSLAAGRLT----TG-----LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDG  233 (312)
Q Consensus       163 ~~~~g~~~~ig~~~~G~l~----d~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~  233 (312)
                      ..++++++.+|=+.+|.+.    +|     ++ |+..+.+..+ ..++.++++...|..       -.++.+++-|+|.+
T Consensus       397 vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~p-rt~~l~~~~~-~~~~~lll~~~~p~~-------~L~~~~~lvg~~~G  467 (591)
T PTZ00207        397 TVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVP-ITIALFIPSV-CIITMLTLFLTLPKA-------ALPLPYFIAAFANG  467 (591)
T ss_pred             hhhhhHHHHhhHHHHHHHHHHHHhhccccccc-hhHHHHHHHH-HHHHHHHHHHHCCcc-------HhHHHHHHHHHHhh
Confidence            4568888888888888765    21     22 2212233333 333334333344422       27888999999999


Q ss_pred             HHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhh---------------------hhHHHHHHHHHHHHHHH
Q 021469          234 VLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY---------------------ISLQAMLIVMVVGICVA  292 (312)
Q Consensus       234 ~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~---------------------l~~~~~~~il~~~~~~~  292 (312)
                      ..-.....+..++|.++-.   ..||+....+-.-++.++..                     -|....+.++.++++++
T Consensus       468 ~~~~~~~~i~selFgk~~g---~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g  544 (591)
T PTZ00207        468 FMAATIALVTRTIFAKDPA---KHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLA  544 (591)
T ss_pred             HhHHHHHHHHHHHhccchH---HHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHH
Confidence            9989999999999974333   34444443333333333221                     14566788899999999


Q ss_pred             HHHHHHhhhhhhh
Q 021469          293 LVGILFLTIQVEK  305 (312)
Q Consensus       293 ~~~~~~~~~~~~~  305 (312)
                      .+.-.++-+|++|
T Consensus       545 ~~~s~~l~~R~r~  557 (591)
T PTZ00207        545 FITSTYVHLQYRR  557 (591)
T ss_pred             HHHHhheeeehHH
Confidence            9988888766654

>TIGR00806 rfc RFC reduced folate carrier

Probab=97.03  E-value=0.021  Score=55.49  Aligned_cols=109  Identities=14%  Similarity=0.059  Sum_probs=83.1

Q ss_pred             hhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhh
Q 021469          159 VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQ  238 (312)
Q Consensus       159 ~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~  238 (312)
                      .|.+...+..+-.++.+.+|.+.||++.|+ ++.++.+...+..++..  +...     .....++=+++|++.+..- .
T Consensus        64 ~G~I~s~F~ysYal~qIp~GlLaDrlG~K~-vL~l~~l~Wsl~t~L~~--fa~S-----l~~L~i~R~llGvaEA~~~-A  134 (511)
T TIGR00806        64 TNEIIPVLPYSHLAVLVPVFLLTDYLRYKP-VLVLQALSFVCVWLLLL--LGTS-----VWHMQLMEVFYSVTMAARI-A  134 (511)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHhCchH-HHHHHHHHHHHHHHHHH--HHHH-----HHHHHHHHHHHHHHHHHHH-H
Confidence            677888888888999999999999998665 55555555544433322  2111     1236788999999999988 8


Q ss_pred             hHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          239 LSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       239 ~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      .+.++...+|.+ +.++.+.++.-..+|.+++-.+.+.+
T Consensus       135 ~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll  173 (511)
T TIGR00806       135 YSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL  173 (511)
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            888999999854 47899999999999999999887753

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=97.02  E-value=0.015  Score=56.84  Aligned_cols=105  Identities=13%  Similarity=0.007  Sum_probs=68.3

Q ss_pred             HHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCC---chHHHHHHHHHHhhhhHHhhhhHh
Q 021469          165 VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG---TLYPLIMAALLGIGDGVLNTQLSA  241 (312)
Q Consensus       165 ~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~G~~d~~~~t~~~~  241 (312)
                      ..-++-.+|+++.|++.||+|||+ .+.++.++...+-++.  ...|+-...+   +.+..+.-++.|++.+........
T Consensus        65 ~~~l~~~ig~~~~G~l~Dr~Grr~-~l~~~~~l~~i~~~~~--a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~  141 (490)
T PRK10642         65 VPFLIRPLGGLFFGMLGDKYGRQK-ILAITIVIMSISTFCI--GLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASI  141 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccHH-HHHHHHHHHHHHHHHH--HhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHH
Confidence            344667899999999999999876 4445554443332221  2222211000   013566788899999999999999


Q ss_pred             HHHHhccCC-hhhhHHHHHHHHHHHHHHHHHh
Q 021469          242 LLGILFKHD-TEGAFAQLKVWQCASIAVVFFI  272 (312)
Q Consensus       242 i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~  272 (312)
                      ++.+.+|++ +..+.++......+|..++..+
T Consensus       142 ~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~  173 (490)
T PRK10642        142 FVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGV  173 (490)
T ss_pred             HHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            999999754 4566777776666666666544

>TIGR00889 2A0110 nucleoside transporter

Probab=97.00  E-value=0.018  Score=55.16  Aligned_cols=66  Identities=11%  Similarity=0.047  Sum_probs=43.3

Q ss_pred             HHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHH
Q 021469          130 LFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQ  198 (312)
Q Consensus       130 ~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~  198 (312)
                      .+...|+..++..-...+.+   -+..+++|+++..+.++..+++.+.|++.||++||++++.++.+..
T Consensus        14 ~~~~~~~~~~~l~~~l~~~~---g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~   79 (418)
T TIGR00889        14 QWFIWGSWLVTLGSYMSKTL---HFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAG   79 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence            34444555455443333222   1234679999999999999999999999999865444555554444

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=96.91  E-value=0.043  Score=54.87  Aligned_cols=134  Identities=13%  Similarity=0.098  Sum_probs=78.1

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ....++.....+++.++..+.|+|+|.+|||. .++.+.++.+...+..-  ..++     ..-...-..+.|++-+. +
T Consensus        78 ~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~-~~i~g~~l~vvG~Iv~a--tA~~-----~~~~iag~~l~GvgaG~-~  148 (599)
T PF06609_consen   78 DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRY-FFIIGSLLGVVGSIVCA--TAQN-----MNTFIAGMVLYGVGAGV-Q  148 (599)
T ss_pred             ccchHHHHHHHHHHHHHHHhhHHHHHHhcchH-HHHHHHHHHHhHHHHhh--cCCc-----HHHHHHHHHHHHHhhHH-H
Confidence            34456666788889999999999999999774 66677777665554332  2222     11256677888998554 4


Q ss_pred             hhhHhHHHHhccCChhhhHHHHHHHHHHH--------HHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 021469          237 TQLSALLGILFKHDTEGAFAQLKVWQCAS--------IAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQ  302 (312)
Q Consensus       237 t~~~~i~g~~~~~~~~~afa~~~~~qs~g--------~ai~f~~~~~l~~~~~~~il~~~~~~~~~~~~~~~~~  302 (312)
                      -..+..++++.|.+.. ..+.  .+..+.        ..++..+...-+.+|-+++..++..++++.....-+.
T Consensus       149 ~~~~~~isEl~p~k~R-~~~~--~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~P  219 (599)
T PF06609_consen  149 ELAALAISELVPNKWR-GLGL--AIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFP  219 (599)
T ss_pred             HHHHHHHHHhcccchh-hhHh--HHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCC
Confidence            4567778888875443 2221  111122        2222222222245666666666666666555444333

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=96.88  E-value=0.043  Score=51.99  Aligned_cols=112  Identities=15%  Similarity=0.157  Sum_probs=79.9

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHH-HHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIA-QVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      .+.+++.+.-.+...+-=+..|.+.||+|.|+... +..++ .+-++.+.+-..+|+     ++..+++..+.|++.+.+
T Consensus        49 ~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~-~s~~l~~IP~~~~~~a~~~~~-----~~~ll~~gll~G~~GasF  122 (417)
T COG2223          49 GQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTI-LSMLLLLIPCLGLAFAVTYPS-----TWQLLVIGLLLGLAGASF  122 (417)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHH-HHHHHHHHHHHHHHHHccCCc-----hHHHHHHHHHHhccccee
Confidence            45677776667777778889999999998776433 33333 333333322122221     245889999999999988


Q ss_pred             hhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          236 NTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      -..++ .++..||+++ ..|.+++- .-++|.++..++.|.+
T Consensus       123 av~m~-~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v  162 (417)
T COG2223         123 AVGMP-NASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLV  162 (417)
T ss_pred             hcccc-cccccCChhhhhHHHHHhc-cccccHHHHHHHHHHH
Confidence            77766 6778898655 57999999 9999999999999964

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=96.88  E-value=0.036  Score=52.94  Aligned_cols=130  Identities=10%  Similarity=0.136  Sum_probs=80.1

Q ss_pred             HHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHh
Q 021469          128 IPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI  207 (312)
Q Consensus       128 ~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~  207 (312)
                      .-.++..|....|+ +.|-+..   -+...++|.+++..++..+++..+.|.+.||.++++.+..+..++........  
T Consensus        12 f~~f~~~G~~~p~~-~~~L~~~---G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~--   85 (400)
T PF03825_consen   12 FLYFFAYGAFLPYL-PLYLESR---GFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL--   85 (400)
T ss_pred             HHHHHHHHHHHHHH-HHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH--
Confidence            33455677777776 3343332   12346899999999999999999999999997543334333333322222111  


Q ss_pred             cccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHH
Q 021469          208 NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVV  269 (312)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~  269 (312)
                      .+.++     ++..+.+.+++.+..........++.-+.-+| +..-++-.|.|-++|..++
T Consensus        86 ~~~~~-----f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~-~~~~YG~iRlwGSiGf~~~  141 (400)
T PF03825_consen   86 AFSSS-----FWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD-RGKDYGRIRLWGSIGFIVA  141 (400)
T ss_pred             HHhcc-----HHHHHHHHHHHHHHHccHHHHHHHHHHHHccc-ccCCCCcchhhhhHHHHHH
Confidence            12122     23455666666666555555555555554444 3447899999999999887

>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=96.86  E-value=0.0079  Score=56.36  Aligned_cols=111  Identities=14%  Similarity=0.143  Sum_probs=72.9

Q ss_pred             hhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHH-HHHHHhhhhHHh
Q 021469          158 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM-AALLGIGDGVLN  236 (312)
Q Consensus       158 ~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~G~~d~~~~  236 (312)
                      .-|++-..|++++.+.+...|.++||.||| +++..+++.....++    .|.-+.+    .-+++. =++.|..++-. 
T Consensus        69 yaGflGSsF~ilQ~~sS~~~G~~SD~yGRk-pvll~c~~~va~s~l----l~~~S~~----F~afv~aR~l~Gi~kgnl-  138 (451)
T KOG2615|consen   69 YAGFLGSSFSILQFISSPLWGCLSDRYGRK-PVLLACLIGVALSYL----LWALSRN----FAAFVLARFLGGIFKGNL-  138 (451)
T ss_pred             hhhhHhhHHHHHHHHhhhhhhhhhhhhCch-HHHHHHHHHHHHHHH----HHHHHHH----HHHHHHHHHhhhhccCch-
Confidence            467888889999999999999999999976 455555444333222    2211110    114555 56667766554 


Q ss_pred             hhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhhhH
Q 021469          237 TQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYISL  278 (312)
Q Consensus       237 t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l~~  278 (312)
                      +.+-+++++.++| ++..+++....-.++|.-++=.+..++..
T Consensus       139 ~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~  181 (451)
T KOG2615|consen  139 SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ  181 (451)
T ss_pred             HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence            5566789998865 34567888877777776666666666544

>PRK15075 citrate-proton symporter; Provisional

Probab=96.83  E-value=0.029  Score=53.78  Aligned_cols=102  Identities=14%  Similarity=0.059  Sum_probs=64.4

Q ss_pred             HHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCC---chHHHHHHHHHHhhhhHHhhhhHhHHHHh
Q 021469          170 DAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG---TLYPLIMAALLGIGDGVLNTQLSALLGIL  246 (312)
Q Consensus       170 ~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~G~~d~~~~t~~~~i~g~~  246 (312)
                      ..+++++.|.+.||++||+ .+..+.++.....++.  .+.++-...+   +....+.-++.|++.+........++.+.
T Consensus        69 ~~ig~~~~G~l~Dr~Grr~-~l~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~  145 (434)
T PRK15075         69 RPLGAIVLGAYIDRVGRRK-GLIVTLSIMASGTLLI--AFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEI  145 (434)
T ss_pred             hhhHHHHHHHHhhhhchHH-HHHHHHHHHHHHHHHH--HhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhh
Confidence            3578899999999999876 4445554443332222  1222210000   01235667889999988777777889998


Q ss_pred             ccC-ChhhhHHHHHHHHHHHHHHHHHhhh
Q 021469          247 FKH-DTEGAFAQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       247 ~~~-~~~~afa~~~~~qs~g~ai~f~~~~  274 (312)
                      +|+ ++..+.++.....++|..++..+..
T Consensus       146 ~p~~~rg~~~~~~~~~~~~g~~~g~~~g~  174 (434)
T PRK15075        146 ATPGRKGFYTSWQSASQQVAVVFAALLGY  174 (434)
T ss_pred             CCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            875 4467888888877777665554443

>PRK09952 shikimate transporter; Provisional

Probab=96.78  E-value=0.048  Score=52.40  Aligned_cols=102  Identities=10%  Similarity=0.001  Sum_probs=64.1

Q ss_pred             HHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCC---chHHHHHHHHHHhhhhHHhhhhHhHHH
Q 021469          168 AFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG---TLYPLIMAALLGIGDGVLNTQLSALLG  244 (312)
Q Consensus       168 ~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~G~~d~~~~t~~~~i~g  244 (312)
                      ++..+|+++.|.+.||+|||+ .+.++.++.....++.  .+.|+-...+   +...++.-++.|++.+........++.
T Consensus        75 ~~~~~g~~~~G~l~Dr~Grr~-~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~  151 (438)
T PRK09952         75 LFRPLGGVVFGHFGDRLGRKR-MLMLTVWMMGIATALI--GLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAV  151 (438)
T ss_pred             HHHhhHHHHHHHHHHhhccHH-HHHHHHHHHHHHHHHH--hcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHH
Confidence            457799999999999999876 4445554444332222  2323211000   112556678889998887777778888


Q ss_pred             HhccCCh-hhhHHHHHHHHHHHHHHHHHh
Q 021469          245 ILFKHDT-EGAFAQLKVWQCASIAVVFFI  272 (312)
Q Consensus       245 ~~~~~~~-~~afa~~~~~qs~g~ai~f~~  272 (312)
                      +.+|+++ ..+.+.......+|..++-.+
T Consensus       152 e~~p~~~rg~~~~~~~~g~~~G~~l~~~~  180 (438)
T PRK09952        152 ESAPKNKKAFYSSGVQVGYGVGLLLSTGL  180 (438)
T ss_pred             HhCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            8887654 455666666666666665433

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=96.77  E-value=0.069  Score=50.58  Aligned_cols=137  Identities=18%  Similarity=0.090  Sum_probs=86.0

Q ss_pred             HHHHHHHhhhhcCCC-----ChhhHHHHHHHHHHHHHHHHH---hcccC---CC---CCCCchHHHHHHHHHHhhhhHHh
Q 021469          171 AICSLAAGRLTTGLP-----SITFIVSGGAIAQVVVFLWIL---INYSV---TS---GVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       171 ~ig~~~~G~l~d~~~-----~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~---~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ...-...|+.+|+.+     ||.|-++.|..+........-   +....   +.   .+.+...+.+.+.++|+|-+..+
T Consensus        28 ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~  107 (403)
T PF03209_consen   28 APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASG  107 (403)
T ss_pred             HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhH
Confidence            345667799999766     787777788777655433221   11111   11   11111357888999999999999


Q ss_pred             hhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhh-h----HHHH---HHHHHHHHHHHHHHHHHhhhhhhhcc
Q 021469          237 TQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI-S----LQAM---LIVMVVGICVALVGILFLTIQVEKAF  307 (312)
Q Consensus       237 t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l-~----~~~~---~~il~~~~~~~~~~~~~~~~~~~~~~  307 (312)
                      |...+++.+..+| ++.++.++.....-+|..++-.....+ .    ....   ...-.+.+++.++..+-.|.|.+++.
T Consensus       108 T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~  187 (403)
T PF03209_consen  108 TSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNLIALWGQEPRRSRRA  187 (403)
T ss_pred             HHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccc
Confidence            9999999999875 446788988888888888877766542 1    1111   11222344445555555565555443

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=96.70  E-value=0.32  Score=46.20  Aligned_cols=137  Identities=19%  Similarity=0.181  Sum_probs=85.5

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ...|+.+..|+.+-.+++.+...+.||++||+.+. ....+....-++..  ..|+     ++...+.=++-|+.-+.+-
T Consensus        48 ~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl-~~l~lFi~~n~l~a--lAp~-----f~~Ll~aR~~~g~a~G~f~  119 (394)
T COG2814          48 GAAGQLITAYALGVALGAPLLALLTGRLERRRLLL-GLLALFIVSNLLSA--LAPS-----FAVLLLARALAGLAHGVFW  119 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHH-HHHHHHHHHHHHHH--Hhcc-----HHHHHHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999876443 33323222222222  2233     3446667788888888888


Q ss_pred             hhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhh----hhhHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 021469          237 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGICVALVGILFLTIQVE  304 (312)
Q Consensus       237 t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~----~l~~~~~~~il~~~~~~~~~~~~~~~~~~~  304 (312)
                      .....+...+-|+++ .++.++...-.+++..++-=+..    .+..+.-+....   +++++.....-...+
T Consensus       120 ~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia---~l~ll~~~~~~~~lP  189 (394)
T COG2814         120 SIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIA---VLALLALLLLWKLLP  189 (394)
T ss_pred             HHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHH---HHHHHHHHHHHHhCC
Confidence            888899999987644 57777766654444444433333    333443343333   334444444444444

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=96.64  E-value=0.062  Score=54.57  Aligned_cols=133  Identities=18%  Similarity=0.153  Sum_probs=80.5

Q ss_pred             hHHHHHHHHHHhhhhcC-CCChhhHHHHHHHHHHHHHHHHHh-cccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHH
Q 021469          167 GAFDAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLG  244 (312)
Q Consensus       167 g~~~~ig~~~~G~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g  244 (312)
                      ....-+.++++|.+.|+ +|+++ .+.++.++.....+++.+ ..++..+.......++...+...|.+.....+.+..+
T Consensus        33 ~~l~yl~pilGg~iAD~~lG~~~-tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~g  111 (654)
T TIGR00926        33 TYLCYLTPLIGAIIADGWLGKFK-TILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGG  111 (654)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhHH-HHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhH
Confidence            33445566777888895 57655 344555555444443322 1221111001123556677778899999999999999


Q ss_pred             HhccCC----hhhhHHHHHHHHHHHHHHHHHhhhhhhHH-----------HHHHHHHHHHHHHHHHHHHhh
Q 021469          245 ILFKHD----TEGAFAQLKVWQCASIAVVFFIGPYISLQ-----------AMLIVMVVGICVALVGILFLT  300 (312)
Q Consensus       245 ~~~~~~----~~~afa~~~~~qs~g~ai~f~~~~~l~~~-----------~~~~il~~~~~~~~~~~~~~~  300 (312)
                      +.|+++    ..+.|.++.+.-++|+.++..+.+++...           .-+.+..++.+++.+.+..--
T Consensus       112 dqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~  182 (654)
T TIGR00926       112 DQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGS  182 (654)
T ss_pred             hhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhc
Confidence            999743    24678899999999988888887765321           233444455555555554433

>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=96.63  E-value=0.067  Score=50.32  Aligned_cols=232  Identities=13%  Similarity=0.051  Sum_probs=116.0

Q ss_pred             cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHH---HHHHHhccCCccc-cccchhh
Q 021469           24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLG---TILMCFLRKEEDK-GEKETAD   99 (312)
Q Consensus        24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g---~~l~lfL~~~~~~-~~~~~~~   99 (312)
                      .||++++-.+.+-..+++|.++|..|..++-...+. + +.....+-.+.++....   ....++||++-.. +|+|+..
T Consensus       150 sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~-~-g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~~~~~  227 (451)
T KOG2615|consen  150 SEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSI-S-GSYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKRNDEHS  227 (451)
T ss_pred             ChhhccceeeeeehhhhcchhhcchhhhHHHhhHhh-h-ccCchHHHHHHHHHHHHHHHHHHHHhCCccccchhhccccc
Confidence            457899999999999999999999887665432111 1 11122332333322222   2234677764322 2221110


Q ss_pred             cchhhhhHHHHHHHH-----HHHhhcChhhH------------HHHHHHHhhhhHhhhhhhccccccccccccc--chhh
Q 021469          100 ASVNFYSYLVSLSKS-----ITTLLADVRML------------LIIPLFAYSGLQQAFVWAEFTKEIVTPALGV--SGVG  160 (312)
Q Consensus       100 ~~~~~~~s~~~~~~~-----~~~~~~~~~~l------------ll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~--~~~g  160 (312)
                      ... +..+-.++.++     -..+++|++..            .++-.++++|++..-      +.+-+--+|.  .+.|
T Consensus       228 ~~~-~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~------~~l~~~rfg~ss~~~G  300 (451)
T KOG2615|consen  228 TLQ-EAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTV------LFLTHGRFGYSSMQQG  300 (451)
T ss_pred             chh-hhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhH------HHhhcCccCCChhhhe
Confidence            000 00000011111     12234444422            233344445544221      1221111122  3456


Q ss_pred             HHHHHHhHHHHHHHHHHhhhhcCCCCh----hhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          161 GAMAVYGAFDAICSLAAGRLTTGLPSI----TFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       161 ~v~~~~g~~~~ig~~~~G~l~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      .+...-|+.   +.++.+.+..+.++.    .........+..-.++  ++.+.+.     +...+....+..++.+..-
T Consensus       301 ~vl~~tGl~---m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~l--lls~~~~-----~~~l~~~s~l~sf~~A~~v  370 (451)
T KOG2615|consen  301 KVLSTTGLL---MLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFL--LLSLART-----PVVLYLGSTLKSFSTASVV  370 (451)
T ss_pred             eeeehhhHH---HHHHHHhccccccccccchhhHHHHHHHHHHHHHH--HHhcccc-----chhhhHHHHHHHHHHHHhh
Confidence            655555544   444555544433321    1112222222222222  1233222     2347788999999999999


Q ss_pred             hhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhh
Q 021469          237 TQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       237 t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~  274 (312)
                      |++..++.+..|. ++..+.+++|-..+++=+++=..++
T Consensus       371 t~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g  409 (451)
T KOG2615|consen  371 TCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSG  409 (451)
T ss_pred             HHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhh
Confidence            9999999998874 5567888888888877777766664

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=96.40  E-value=0.15  Score=48.29  Aligned_cols=115  Identities=16%  Similarity=0.071  Sum_probs=83.0

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      ..+.+.+-.++-.+-.++++..|.+.||++.|+ -+++|+.+....-.   +.|| .+...++....+..+.+|.|-++.
T Consensus        47 ~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~-gi~lgL~l~avg~~---lF~p-Aa~~~~y~~FL~~lFila~Gi~~L  121 (422)
T COG0738          47 YFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKA-GIVLGLLLYAVGAA---LFWP-AASSKSYGFFLVALFILASGIGLL  121 (422)
T ss_pred             HHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHH-HHHHHHHHHHHHHH---HHhh-hhhhhhHHHHHHHHHHHHhhhHHH
Confidence            345677777777788899999999999998665 34566666543322   2343 322223334555669999999999


Q ss_pred             hhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          236 NTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      ||..+..++.+.++++ .+-.++.+.+.++|+.++=.+...
T Consensus       122 etaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~  162 (422)
T COG0738         122 ETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSS  162 (422)
T ss_pred             HhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence            9999999999987644 456888899999999988766554

>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=96.39  E-value=0.053  Score=52.84  Aligned_cols=114  Identities=13%  Similarity=0.121  Sum_probs=83.7

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHH-HHHHHHHh-cccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQV-VVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGV  234 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~d~~  234 (312)
                      ++-|+++..+..+.+++.+..|.+.||+|.|+.+ ..+.++.. .+++.-+. .+.       .+..+++-++-|++++.
T Consensus        73 ~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~-~~~~~~sa~~t~l~P~aa~~~-------~~~~~~~R~lqGl~~g~  144 (466)
T KOG2532|consen   73 TEKGLIFSSFFWGYILGQIPGGYLADKFGARRVF-FISGLISALLTLLTPLAASIG-------FYLLLVLRFLQGLGQGV  144 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHH-HHHHHHHHHHHHHHHHHHHhc-------chhhHHHHHHhHHHHhH
Confidence            3568888889999999999999999999977644 33433332 22211110 111       12468899999999999


Q ss_pred             HhhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhhhH
Q 021469          235 LNTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYISL  278 (312)
Q Consensus       235 ~~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l~~  278 (312)
                      ....+..+..+-.|. ++....++......+|..++.-+++.++.
T Consensus       145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~  189 (466)
T KOG2532|consen  145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCE  189 (466)
T ss_pred             HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc
Confidence            999999999998874 44567888888888999999988887753

>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]

Probab=96.34  E-value=0.0039  Score=59.63  Aligned_cols=170  Identities=14%  Similarity=0.033  Sum_probs=83.6

Q ss_pred             CccccceeecccchhhhhhcCCCcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHH-HHH
Q 021469            1 MGWRGGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVI-TLG   79 (312)
Q Consensus         1 ~~~aqG~Ylt~~s~~~~~~~~~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~-~~g   79 (312)
                      +|+|.-.|.+-..+--   .+.-++++|++-+++|+..-..|..+|.++...+-.....     .+.=|.+-.+++ +++
T Consensus       131 vGiGeAs~~~ia~s~I---aD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~-----Wr~af~~~avl~vi~~  202 (493)
T KOG1330|consen  131 VGIGEASYSPIAPSLI---ADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFW-----WRWAFRGSAVLGVIVG  202 (493)
T ss_pred             hccchhhhcccchhHh---hhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccc-----eEEEEEeehHHHHHHH
Confidence            4666666655433321   1223567999999999999888888888777655332211     122222222233 334


Q ss_pred             HHHHHhccCCcccccc--chhhcchhhhhHHHHHHHHHHHhhcChhh----HHHHHHHHhhhhHhhhhh---hccccccc
Q 021469           80 TILMCFLRKEEDKGEK--ETADASVNFYSYLVSLSKSITTLLADVRM----LLIIPLFAYSGLQQAFVW---AEFTKEIV  150 (312)
Q Consensus        80 ~~l~lfL~~~~~~~~~--~~~~~~~~~~~s~~~~~~~~~~~~~~~~~----lll~p~~~~~G~~~~f~~---~~~~~~~~  150 (312)
                      .++++|+++|++..++  |+.++......+.++++   ..+.|+|..    +..+-..+-+|- .++|.   ..+.+.+.
T Consensus       203 ~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl---~~l~~~~v~v~~sl~~~a~~fv~Gs-~sww~p~~~~~~~~~~  278 (493)
T KOG1330|consen  203 LLVFLFVREPERGARDEVDGENKMVKPFTSVWKDL---KVLAKIKVFVLSSLGIIAAQFVIGS-LSWWAPAFIYYSYELI  278 (493)
T ss_pred             HHHHhhccCcccccccccccCCcCCCCccchHHHH---HHHHccCceeeehHHHHHHHHhccc-cchhhhhHHHHHHHHh
Confidence            5557888888864332  22221112233444444   444444432    333334444442 12221   11222222


Q ss_pred             ccccccchhhHHHHHHhHHHHHHHHHHhhhhcCC
Q 021469          151 TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL  184 (312)
Q Consensus       151 s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~  184 (312)
                      .+.-+.+  -+...+.-.++++|.+++|.++||+
T Consensus       279 ~~~~~~~--~ifg~vt~~~G~lGvl~Ggiisd~~  310 (493)
T KOG1330|consen  279 GFDHNAT--LIFGGVTCAGGSLGVLFGGIISDKL  310 (493)
T ss_pred             CCccccc--hhhhhHHHhhchhhheehHHHHHHH
Confidence            1110111  1222344556788888888888873

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=96.28  E-value=0.026  Score=53.88  Aligned_cols=117  Identities=12%  Similarity=0.096  Sum_probs=63.3

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhH-HHHHHHHHH-HHHHHHHhcccC-CCCCCCchHHHHHHHHHHhhh
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFI-VSGGAIAQV-VVFLWILINYSV-TSGVLGTLYPLIMAALLGIGD  232 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~G~~d  232 (312)
                      -+++|.+..+..+...+.+.+.|.+.||.+.|+.+ ..++.+... +.+. .+...|- ..+.  ...+.+.+..+|++-
T Consensus        42 ~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff-~~v~~pll~~n~--~lg~iig~i~l~~~f  118 (412)
T PF01306_consen   42 GTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFF-IYVFGPLLQSNF--WLGAIIGGIYLGLVF  118 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHH-HHTHHHHHHTT---HHHHHHTTTTTTTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence            35789999999999999999999999998754444 333332221 2222 1111110 0000  011222233334332


Q ss_pred             hHHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          233 GVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       233 ~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ..-....-++..... .+..--++=-|.|-|+|.+++-.+.+.+
T Consensus       119 ~~~~~~~Ea~~er~s-r~~~feYG~~R~wGSig~ai~s~~~G~L  161 (412)
T PF01306_consen  119 NAGVPLSEAYAERVS-RRNGFEYGRARMWGSIGFAIASLLAGIL  161 (412)
T ss_dssp             TTHHHHHHHHHHHHH-HHHSS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHH-HHhcCCcchHHHHhhHHHHHHHHHhhee
Confidence            222222222222211 1122348889999999999999998875

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=96.16  E-value=1.5  Score=43.11  Aligned_cols=81  Identities=7%  Similarity=-0.026  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHHHHHHHh--cccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHHHHH-HHHH
Q 021469          191 VSGGAIAQVVVFLWILI--NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQ-CASI  266 (312)
Q Consensus       191 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~~q-s~g~  266 (312)
                      +.+|.++...+|..+.+  ....+.....++|..+.+++.++|+-+....-.+.++++.|++- .+.++++-+.. ++|.
T Consensus       348 fa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~  427 (493)
T PRK15462        348 FALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIAN  427 (493)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence            67788777777765432  12211112334667888999999999999999999999998755 57888885533 4555


Q ss_pred             HHHHH
Q 021469          267 AVVFF  271 (312)
Q Consensus       267 ai~f~  271 (312)
                      .++-.
T Consensus       428 ~~~g~  432 (493)
T PRK15462        428 YLAGV  432 (493)
T ss_pred             HHHHH
Confidence            55433

>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]

Probab=95.96  E-value=0.06  Score=51.77  Aligned_cols=140  Identities=16%  Similarity=0.017  Sum_probs=82.8

Q ss_pred             hHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhh
Q 021469          160 GGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQL  239 (312)
Q Consensus       160 g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~  239 (312)
                      +.+-+..-+++++|.++.|++.||+|||+ ++....++.+++-+.+-.....+++..-.++.++.-+++|+|-+.=...-
T Consensus        87 ~~Vn~~A~vGti~GQl~FG~lgD~~GRK~-vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlS  165 (538)
T KOG0252|consen   87 ALVNAAALVGTIFGQLFFGWLGDKFGRKK-VYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLS  165 (538)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcchh-hhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcch
Confidence            44555667889999999999999999875 44444433333322111111112221112356777888899877766655


Q ss_pred             HhHHHHhccCCh-----hhhHHHHHHHHHHHHHHHHHhhhh-------------hhHHHHHHHHHHHHHHHHHHHHHhh
Q 021469          240 SALLGILFKHDT-----EGAFAQLKVWQCASIAVVFFIGPY-------------ISLQAMLIVMVVGICVALVGILFLT  300 (312)
Q Consensus       240 ~~i~g~~~~~~~-----~~afa~~~~~qs~g~ai~f~~~~~-------------l~~~~~~~il~~~~~~~~~~~~~~~  300 (312)
                      ..+.++..++++     +..|+.-.+-.-+|..++..+...             +...|.+.+.++.+-...+.|+.+.
T Consensus       166 AtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~  244 (538)
T KOG0252|consen  166 ATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLK  244 (538)
T ss_pred             HHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            555555555444     234666666566666666655432             2345677777777777777777664

>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]

Probab=95.95  E-value=0.14  Score=49.97  Aligned_cols=116  Identities=19%  Similarity=0.128  Sum_probs=81.2

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCC-hhhHHHHHHHHHHHH-HHHHHhcccCCCCCCCchHHHHHHHHHHhhhh
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPS-ITFIVSGGAIAQVVV-FLWILINYSVTSGVLGTLYPLIMAALLGIGDG  233 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~  233 (312)
                      .+-.|.+.+..++++.+++.+.|.-..|.++ |+|++ .+.++++++ .+...+.+.|+. .  -++.++..++.|+|-+
T Consensus        70 ~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli-~s~ii~~~g~llY~~l~~~~~~-~--~y~mL~~R~l~Gvg~~  145 (488)
T KOG2325|consen   70 ATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLI-VSFLIAIIGNLLYLALAYVPNG-V--KYLMLVARILTGVGVG  145 (488)
T ss_pred             cchhhHHHHHHHHHHHhcchhhcccccccCCcccCHH-HHHHHHHHHHHHHHHHHhcccc-h--HHHHHHHHHHcCcCcc
Confidence            4557999999999999999999988877653 55664 555555433 333223444442 1  2467788999999987


Q ss_pred             HHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          234 VLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       234 ~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      ..-...-.+-..-.++|+.+|++....-+.+|..++-.+++.
T Consensus       146 n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~  187 (488)
T KOG2325|consen  146 NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLA  187 (488)
T ss_pred             cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHH
Confidence            766666555555567778789998888888888777776653

>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=95.91  E-value=0.096  Score=51.39  Aligned_cols=148  Identities=14%  Similarity=0.047  Sum_probs=89.5

Q ss_pred             cChhhHHHHHHHHhhhhHhhhhhhcccccccc---cc--cccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHH
Q 021469          120 ADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT---PA--LGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGG  194 (312)
Q Consensus       120 ~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s---~~--lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~  194 (312)
                      +.|-.+.++|++.+.-+...--..-..++.+.   .-  ++-+..+.+-..+-++-+++-+..|.|.||++-.+.+...+
T Consensus        39 ~~K~dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~  118 (495)
T KOG2533|consen   39 LRKLDLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSG  118 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHH
Confidence            33444677777666554432221111111111   00  12234566667778888899999999999997332222222


Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhh
Q 021469          195 AIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIG  273 (312)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~  273 (312)
                      ++-.+.++.-   .+..+     .+...++-+++|+..++.-...-.++|..|.+++ ...++++...+++|..++-.++
T Consensus       119 ~~w~~~~~~~---~~~~s-----~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA  190 (495)
T KOG2533|consen  119 ILWGLFGFLT---AAVHS-----FPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIA  190 (495)
T ss_pred             HHHHHHHHHH---HHHhh-----hHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHH
Confidence            2111111111   11111     1346788999999999999999999999997544 5679999988887777777776


Q ss_pred             hh
Q 021469          274 PY  275 (312)
Q Consensus       274 ~~  275 (312)
                      ..
T Consensus       191 ~g  192 (495)
T KOG2533|consen  191 YG  192 (495)
T ss_pred             HH
Confidence            65

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=95.88  E-value=1.5  Score=40.92  Aligned_cols=109  Identities=14%  Similarity=-0.006  Sum_probs=62.3

Q ss_pred             ccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469          155 GVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGV  234 (312)
Q Consensus       155 g~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~  234 (312)
                      ..++++....+--.+..+.+.+.|.+.||+|||+ ..++-++++...-++   ...++     .+..++--++-|++.+.
T Consensus        67 ~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~-~cl~~cily~~scl~---k~~~~-----~~~L~~GRvlgGiaTSL  137 (354)
T PF05631_consen   67 SEHQIAILFVAGFASSAIFGTFVGSLADRYGRKK-ACLLFCILYSLSCLT---KHSSN-----YPVLLLGRVLGGIATSL  137 (354)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH-HHHHHHHHHHHHHHH---Hhccc-----cHHHHHHHHHHHHHHHH
Confidence            3456777776666778888899999999999876 333444444433222   11122     23455556888888877


Q ss_pred             HhhhhH-hHHHHhc----cCCh-hhhHHHHHHHHHHHHHHHHHh
Q 021469          235 LNTQLS-ALLGILF----KHDT-EGAFAQLKVWQCASIAVVFFI  272 (312)
Q Consensus       235 ~~t~~~-~i~g~~~----~~~~-~~afa~~~~~qs~g~ai~f~~  272 (312)
                      ..+.-- |++.+.-    |++. ...|+..-++.+-..+|+-++
T Consensus       138 LfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv  181 (354)
T PF05631_consen  138 LFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGV  181 (354)
T ss_pred             HHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhH
Confidence            766553 5565542    2222 234554444434334444433

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=95.72  E-value=1  Score=42.23  Aligned_cols=141  Identities=9%  Similarity=0.026  Sum_probs=63.3

Q ss_pred             HHHHHHhhhhHhhhhhhcccccccccccccchhhHH--HHHHhHHHHHHHHHHhh-hhcCCCChhhHHHHHHHHHH-HHH
Q 021469          127 IIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGA--MAVYGAFDAICSLAAGR-LTTGLPSITFIVSGGAIAQV-VVF  202 (312)
Q Consensus       127 l~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v--~~~~g~~~~ig~~~~G~-l~d~~~~~~~~~~~~~~~~~-~~~  202 (312)
                      +.-+.+..|+..++.....|.-+-+..+..+.+|..  +....+...+.+.+.++ ..||.+||+..++...++.. ...
T Consensus         6 ~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~   85 (390)
T TIGR02718         6 LGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLA   85 (390)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHH
Confidence            333445556655555433332221122234567775  34456667677766644 67788766543222211111 111


Q ss_pred             HHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhh
Q 021469          203 LWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~  274 (312)
                      .+.  ...+...  +..+........++..+........+..+..   +++..+..+..+..|..+++.+++
T Consensus        86 ~~~--~~~~~~~--~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~---~~~~~~~~~~~~~~g~~lG~~~g~  150 (390)
T TIGR02718        86 SLA--LVGPDVA--GAGWAVGLLACASLASATQDIATDGMAAEHF---NGRTLAKGNAVQIAGVMIGFFGGG  150 (390)
T ss_pred             HHH--cCCcchh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CHhhhhHHHHHHHHHHHHHHHHHH
Confidence            111  1222211  0112233333334444443333333333322   233445556666667777776665

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=95.72  E-value=0.72  Score=43.99  Aligned_cols=58  Identities=12%  Similarity=0.081  Sum_probs=44.6

Q ss_pred             hHHHHHHHHHHhhhhHHhhhhHhHHHHhcc-CChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          219 LYPLIMAALLGIGDGVLNTQLSALLGILFK-HDTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       219 ~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~-~~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ++.+++.+.-|+..+......+..+.+..+ +++|-+.+.--.-.++|.+++-.++-.+
T Consensus       336 ~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l  394 (402)
T PF02487_consen  336 WIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL  394 (402)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            567888888899777777777777777654 5668889999998888888887766543

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=95.71  E-value=0.38  Score=47.04  Aligned_cols=108  Identities=12%  Similarity=0.078  Sum_probs=69.7

Q ss_pred             hHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhh
Q 021469          160 GGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQL  239 (312)
Q Consensus       160 g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~  239 (312)
                      ..+..++.++.++|+++.|.+.||+|||. .+.+..++...+-.........+.    +....+--++.|+.-+......
T Consensus        63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~-~l~~~~~l~~~~~~~~~~s~~~~~----~e~li~GR~i~Gl~~gl~~~~~  137 (485)
T KOG0569|consen   63 SLIVSIFFIGGMIGSFSSGLLADRFGRKN-ALLLSNLLAVLAALLMGLSKSAPS----FEMLILGRLIVGLACGLSTGLV  137 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcchH-HHHHHHHHHHHHHHHHHHHHHhhh----HHHHHHHHHHHHHHhHHHHHHH
Confidence            34456788999999999999999999885 434444444333222222221111    1245666778888888888888


Q ss_pred             HhHHHHhccCChh-hhHHHHHHHHHHHHHHHHHh
Q 021469          240 SALLGILFKHDTE-GAFAQLKVWQCASIAVVFFI  272 (312)
Q Consensus       240 ~~i~g~~~~~~~~-~afa~~~~~qs~g~ai~f~~  272 (312)
                      .-.+++..|++.. ..-......-++|.-+++.+
T Consensus       138 pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~  171 (485)
T KOG0569|consen  138 PMYLTEISPKNLRGALGTLLQIGVVIGILLGQVL  171 (485)
T ss_pred             HHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHH
Confidence            8888899997664 34445566666666666544

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=95.68  E-value=0.18  Score=47.28  Aligned_cols=116  Identities=16%  Similarity=0.127  Sum_probs=78.2

Q ss_pred             HHHHHHHHHHHHHHHHh-cccCCCC-CCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-h---hhhHHHHHHHHHH
Q 021469          191 VSGGAIAQVVVFLWILI-NYSVTSG-VLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-T---EGAFAQLKVWQCA  264 (312)
Q Consensus       191 ~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~---~~afa~~~~~qs~  264 (312)
                      ++++.++.+.+.+++.+ ..++..+ -......++-.++.++|.+.....+..+.++.|+++ +   ++.|..+.+.-++
T Consensus         4 I~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~   83 (372)
T PF00854_consen    4 ILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINI   83 (372)
T ss_dssp             HHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhh
Confidence            45666666656554322 2332211 111235667677899999999999999999999765 2   4789999999999


Q ss_pred             HHHHHHHhhhhhh----HHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 021469          265 SIAVVFFIGPYIS----LQAMLIVMVVGICVALVGILFLTIQVEKA  306 (312)
Q Consensus       265 g~ai~f~~~~~l~----~~~~~~il~~~~~~~~~~~~~~~~~~~~~  306 (312)
                      |+.++....+++.    ....+.+-.+..+++++.|..-..+++++
T Consensus        84 G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~  129 (372)
T PF00854_consen   84 GSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKV  129 (372)
T ss_dssp             HHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S
T ss_pred             hhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCc
Confidence            9999999888764    44455555567777777776665555554

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]

Probab=95.64  E-value=2.5  Score=41.49  Aligned_cols=108  Identities=7%  Similarity=-0.115  Sum_probs=59.8

Q ss_pred             HHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchH-HHHHHHHHHhhhhHHhhhh
Q 021469          161 GAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLY-PLIMAALLGIGDGVLNTQL  239 (312)
Q Consensus       161 ~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~~d~~~~t~~  239 (312)
                      ......+..+..+....+++.|+++||. ....+..+...+.++.. ..+.+.+   .++ ..+..+.-+...++++.. 
T Consensus       354 ~~~~~~~~~~~p~~~~~~~~~~~~gR~~-~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-  427 (521)
T KOG0255|consen  354 LNFTLSGLVELPAYFRNGLLLPEFGRRP-PLFLSLFLAGIGLLLFG-WLPDDLG---GWLHWILPLLGKFFIGSAFNLI-  427 (521)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHH-Hhhccch---hHHHHHHHHHHHHHHHHHHHHH-
Confidence            3344566688888888889999998765 43444444433333222 1221211   012 222233333344444444 


Q ss_pred             HhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhh
Q 021469          240 SALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       240 ~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~  274 (312)
                      +....+++|+.. ..+.+....+-.+|+.++-.+..
T Consensus       428 ~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~  463 (521)
T KOG0255|consen  428 FLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPL  463 (521)
T ss_pred             HHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            778888898754 45677777776667666665543

>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]

Probab=95.19  E-value=0.13  Score=50.82  Aligned_cols=112  Identities=13%  Similarity=0.109  Sum_probs=79.8

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ++++++..+......+.+.+.+-+.||++.|. ++++|.++...++++..  |..+-    +.+.+..+++-|+|-+...
T Consensus        81 ~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~-v~i~G~~v~~~g~~lss--F~~~i----~~l~lt~gvi~G~G~~~~~  153 (509)
T KOG2504|consen   81 SQIAWIGSLLLGVYLLAGPLVSALCNRFGCRT-VMIAGGLVAALGLLLSS--FATSL----WQLYLTFGVIGGLGLGLIY  153 (509)
T ss_pred             cHHHHHHHHHHHHHHHhccHHHHHHhhcCchH-HHHHHHHHHHHHHHHHH--HHhhH----HHHHHHHHHHhhccchhhh
Confidence            34667776666677777888888899999875 66788888777766543  22220    1246778899999999988


Q ss_pred             hhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          237 TQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       237 t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      +-.-.+++.+|++++..|.++...-.++|..+-=.+...
T Consensus       154 ~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~  192 (509)
T KOG2504|consen  154 LPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKY  192 (509)
T ss_pred             cchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHH
Confidence            888899999999888878777776555555444444333

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=95.09  E-value=1.9  Score=42.24  Aligned_cols=112  Identities=13%  Similarity=-0.023  Sum_probs=61.6

Q ss_pred             hhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHH-HHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          158 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSG-GAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       158 ~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ..+++..+.++.+++-+.+.|-+.|+-++|++.+.. +.+..+.+..+.+  .+|+.    +++..++.++--++...-+
T Consensus        71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~--v~~~~----~~~~~~l~iia~v~~~~~~  144 (477)
T PF11700_consen   71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWF--VSPGQ----WWLALVLFIIANVGYEASN  144 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH--hCcch----HHHHHHHHHHHHHHHHHHH
Confidence            456777778888999999999999987666544332 2223233333222  23331    1223333333334444445


Q ss_pred             hhhHhHHHHhccCCh---------------------------hhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          237 TQLSALLGILFKHDT---------------------------EGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       237 t~~~~i~g~~~~~~~---------------------------~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      ..-++.+-++.++++                           .+..+.-..+..+|..+...++-.
T Consensus       145 vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~  210 (477)
T PF11700_consen  145 VFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLL  210 (477)
T ss_pred             HHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHH
Confidence            555555556654333                           245556666666777776666543

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]

Probab=94.97  E-value=0.023  Score=54.45  Aligned_cols=118  Identities=13%  Similarity=0.112  Sum_probs=75.4

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcC----CCChhhHHHHHHHHHHHHHHHHHhcccC--------CCCCCCc--h--H
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTG----LPSITFIVSGGAIAQVVVFLWILINYSV--------TSGVLGT--L--Y  220 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~--~--~  220 (312)
                      ++.+.+-.+-.+...+..-+.|..+||    +|||||.+..+.........++  -|.+        ++.....  .  +
T Consensus        67 k~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Li--g~aaDig~~lgd~~~~~~~~rai~~  144 (498)
T KOG0637|consen   67 KWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLI--GYAADIGLLLGDNERKPVKPRAIVL  144 (498)
T ss_pred             ccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhh--hhHhhhhHHhcCCcccccchHHHHH
Confidence            344455556666677777788889994    7888887766665544443322  1211        1111011  1  1


Q ss_pred             HHHHHHHHHhhhhHHhhhhHhHHHHhcc-CChh-hhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          221 PLIMAALLGIGDGVLNTQLSALLGILFK-HDTE-GAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       221 ~~~~~~l~G~~d~~~~t~~~~i~g~~~~-~~~~-~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ..+-.-++=++....|.-+-+.+.++.. |++. +|.+.+-++.++|.+++|...++.
T Consensus       145 ~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~  202 (498)
T KOG0637|consen  145 FILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL  202 (498)
T ss_pred             HHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc
Confidence            2233445556666777788889999874 4443 499999999999999999998754

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=94.83  E-value=0.0077  Score=59.75  Aligned_cols=113  Identities=18%  Similarity=0.147  Sum_probs=0.0

Q ss_pred             eeecccchhhhhhcCCCcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCC-C--CcC-------C-CC-----chhhHH
Q 021469            7 TYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD-K--GGS-------T-SG-----TTLLFI   70 (312)
Q Consensus         7 ~Ylt~~s~~~~~~~~~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~-~--~~~-------~-~~-----~~~~~~   70 (312)
                      +|+.++.++          ++-+.|.|+.++...+|..+|=++....++.. |  ..+       . +.     .+.=|+
T Consensus       164 tYiDDnv~~----------~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfl  233 (539)
T PF03137_consen  164 TYIDDNVSK----------KNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFL  233 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             eeecccccc----------ccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHH
Confidence            799998876          57889999999999999999988876665421 1  100       0 11     123355


Q ss_pred             HHHHHHHHHHHHHHhccCCcccc-----cc-----chhh-----cchhh-----hhHHHHHHHHHHHhhcChhhHHHHH
Q 021469           71 VFLGVITLGTILMCFLRKEEDKG-----EK-----ETAD-----ASVNF-----YSYLVSLSKSITTLLADVRMLLIIP  129 (312)
Q Consensus        71 if~~i~~~g~~l~lfL~~~~~~~-----~~-----~~~~-----~~~~~-----~~s~~~~~~~~~~~~~~~~~lll~p  129 (312)
                      +..++.++..+.+++.|+.-+..     ++     +.++     .+.++     ....++-.+.+.++++||-..+..-
T Consensus       234 i~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~l  312 (539)
T PF03137_consen  234 ICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLIL  312 (539)
T ss_dssp             -------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHH
Confidence            56565666665566666421111     00     0000     00000     1345666677777888887755544

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>TIGR00788 fbt folate/biopterin transporter

Probab=94.81  E-value=1.7  Score=42.21  Aligned_cols=114  Identities=9%  Similarity=0.084  Sum_probs=60.4

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCC----ChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLP----SITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD  232 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d  232 (312)
                      ..++....+..+.-.+-.+ .|.+.||++    ||++.++++.++.. +..+..+..+++  .  .....+..++-+++-
T Consensus        61 ~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~-~~~~~~l~~~~~--~--~~~~~~~~~l~~~~~  134 (468)
T TIGR00788        61 ARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGS-AILYGLLPGKVS--S--AKVAAAFIFLAALAK  134 (468)
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHH-HHHHHhcccccc--h--HHHHHHHHHHHHHHH
Confidence            3455555556666666555 899999884    34555555555542 111122222222  1  112333455566666


Q ss_pred             hHHhhhhHhHHHHhccCChhh---hHHHHHHHHHHHHHHHHHhhhhh
Q 021469          233 GVLNTQLSALLGILFKHDTEG---AFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       233 ~~~~t~~~~i~g~~~~~~~~~---afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      +......-.+..+..+++.+.   ..+......++|..++-.++..+
T Consensus       135 a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l  181 (468)
T TIGR00788       135 ALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPL  181 (468)
T ss_pred             HHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHH
Confidence            666666667777766643321   23333333557777777776654

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]

Probab=94.35  E-value=4.6  Score=37.90  Aligned_cols=146  Identities=13%  Similarity=0.049  Sum_probs=85.0

Q ss_pred             hhhHHHHHHhHHHHHHHHHHhhhhcCCCCh-hhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          158 GVGGAMAVYGAFDAICSLAAGRLTTGLPSI-TFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       158 ~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      +.|.+-++.-+.++++++..|.+.-++.|. ..++.++...+.++..++  .+..+     -|++|+.+++++......-
T Consensus       272 yNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m--~~t~~-----Iw~~Ya~yvlfr~~y~l~i  344 (433)
T KOG3810|consen  272 YNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIM--AQTQH-----IWVCYAGYVLFRVIYQLTI  344 (433)
T ss_pred             hcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhh--hcccc-----eehhhhhHHHHHhhHhhhh
Confidence            456666777777888999999986444432 334555655555543332  23222     3678999999988887777


Q ss_pred             hhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhh-----hhhHHH-------HHHHHHHHHHHHHHHHHHhhhhh
Q 021469          237 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP-----YISLQA-------MLIVMVVGICVALVGILFLTIQV  303 (312)
Q Consensus       237 t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~-----~l~~~~-------~~~il~~~~~~~~~~~~~~~~~~  303 (312)
                      |....-++.--+++. .-.|++.-++--+-+++-..+-.     .++...       ++.++.++.+++.........|.
T Consensus       345 tiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~~~~  424 (433)
T KOG3810|consen  345 TIATFQIARNLSSELFGLVFGINTFVALILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLMCRRN  424 (433)
T ss_pred             hHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHHhhcC
Confidence            777666666444333 56788777764444444433211     122222       24444455555555555555666


Q ss_pred             hhccCCC
Q 021469          304 EKAFYSP  310 (312)
Q Consensus       304 ~~~~~~~  310 (312)
                      +++++|+
T Consensus       425 ~~~~~~~  431 (433)
T KOG3810|consen  425 KVPQENS  431 (433)
T ss_pred             CCCCCCC
Confidence            6665554

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=94.24  E-value=5.9  Score=38.74  Aligned_cols=156  Identities=10%  Similarity=-0.006  Sum_probs=75.7

Q ss_pred             ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCC-ch-----hhHHHHHHHHHHHHHHHHhccCCc-cccc---c
Q 021469           26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSG-TT-----LLFIVFLGVITLGTILMCFLRKEE-DKGE---K   95 (312)
Q Consensus        26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~-~~-----~~~~if~~i~~~g~~l~lfL~~~~-~~~~---~   95 (312)
                      ++-.|+++++-..-++|.++|+.+...+-+..+..+.+. ..     .+..+-.++..+...+...+.+.. ..++   +
T Consensus       161 ~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~  240 (472)
T TIGR00769       161 DEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLTDPRSYNP  240 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccccch
Confidence            566799999999999999999977655542222111111 11     122222222222222233332211 1110   0


Q ss_pred             chhhcchhhhhHHHHHHHHHHH-hhcChhhHHHHHHHHhhhhHhhhhhhcccccc---cccccc-cchhhHHHHHHhHHH
Q 021469           96 ETADASVNFYSYLVSLSKSITT-LLADVRMLLIIPLFAYSGLQQAFVWAEFTKEI---VTPALG-VSGVGGAMAVYGAFD  170 (312)
Q Consensus        96 ~~~~~~~~~~~s~~~~~~~~~~-~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~---~s~~lg-~~~~g~v~~~~g~~~  170 (312)
                      ++++.+.+++.+++|    .+| ++++|-++.+.-+.+..|....+...++-+.+   ..+.-. .+..|-.-..-|+..
T Consensus       241 ~~~~~k~k~k~~~~e----s~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~t  316 (472)
T TIGR00769       241 ALKEKKVKPKMSTME----SLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVS  316 (472)
T ss_pred             hhccccCCCCCCHHH----HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Confidence            001111111233444    444 47788888877777777766666543221111   011000 112333444556666


Q ss_pred             HHHHHHHhhhhcCCC
Q 021469          171 AICSLAAGRLTTGLP  185 (312)
Q Consensus       171 ~ig~~~~G~l~d~~~  185 (312)
                      .+..++.+++.+|+|
T Consensus       317 l~~~l~~~~l~~~~G  331 (472)
T TIGR00769       317 VTMMLLSGNVIRKYG  331 (472)
T ss_pred             HHHHHHHHHHHHHhh
Confidence            666667788888776

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT)

Probab=94.10  E-value=6  Score=38.27  Aligned_cols=110  Identities=21%  Similarity=0.269  Sum_probs=61.1

Q ss_pred             hHHHHHHhHHHHHHHHHHhhhhcCCCC-h-hhHH--HHHHHHHHHHHHHHHhcccCCC--C--CCCchHHHHHHHHHHhh
Q 021469          160 GGAMAVYGAFDAICSLAAGRLTTGLPS-I-TFIV--SGGAIAQVVVFLWILINYSVTS--G--VLGTLYPLIMAALLGIG  231 (312)
Q Consensus       160 g~v~~~~g~~~~ig~~~~G~l~d~~~~-~-~~~~--~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~l~G~~  231 (312)
                      -....+|.++..+|-.+..+..  +++ | +.+.  .++-++.+-.|.  +++.+|+.  |  ..+.+++++..+++|+.
T Consensus       310 ~i~~~~fNvgD~vGR~~~~~~~--~p~~~~~~l~i~s~~R~iFIPlf~--lcn~~~~~~~p~~~~~d~~~~~~~~l~glt  385 (437)
T TIGR00939       310 IICFLLFNLFDWLGRSLTSKFM--WPDEDSRWLPILSFLRVLFIPLFL--LCNYPQRSRLPVFFPGDAYFIILMLLFGFS  385 (437)
T ss_pred             HHHHHHHHHHHHHHhhhhheeE--eeCCCccchHHHHHHHHHHHHHHH--HhcCCccccCCeeecccHHHHHHHHHHHHh
Confidence            3455678888888777554331  221 2 1232  122223232232  23444322  1  12236788899999999


Q ss_pred             hhHHhhhhHhHHHHhcc-CChhhhHHHHHHHHHHHHHHHHHhh
Q 021469          232 DGVLNTQLSALLGILFK-HDTEGAFAQLKVWQCASIAVVFFIG  273 (312)
Q Consensus       232 d~~~~t~~~~i~g~~~~-~~~~~afa~~~~~qs~g~ai~f~~~  273 (312)
                      .+..-+.......+.-+ +++|.+-.+..+...+|.+++-.++
T Consensus       386 nGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~  428 (437)
T TIGR00939       386 NGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS  428 (437)
T ss_pred             hhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            98887776654444433 3345666777777777777666554

>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=94.04  E-value=2.3  Score=41.07  Aligned_cols=117  Identities=11%  Similarity=0.079  Sum_probs=68.9

Q ss_pred             hhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHH-HHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhh
Q 021469          159 VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVV-VFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT  237 (312)
Q Consensus       159 ~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t  237 (312)
                      .-+...+|.+..+.-++..-+++|++|-|. ...++.++..+ +++=+...+|.-++...-.+.+.-..+-+...-....
T Consensus        81 ~~wlsmIym~v~vp~gf~~mw~ldk~GLR~-a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~  159 (480)
T KOG2563|consen   81 ADWLSMIYMVVSVPFGFAAMWILDKFGLRT-ALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILG  159 (480)
T ss_pred             HHHHHHHHHHHHHHHhhHHHHhhcccchHH-HHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhc
Confidence            345556788889999999999999998775 44677777653 3332211222111110001344444455555544444


Q ss_pred             hhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          238 QLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       238 ~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ...-+-+..|+++ +..|-++--+-.-+|.++++.+.|.+
T Consensus       160 lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppil  199 (480)
T KOG2563|consen  160 LPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPIL  199 (480)
T ss_pred             cccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcccee
Confidence            4344445556543 34566666666669999999998865

>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]

Probab=94.01  E-value=0.35  Score=47.16  Aligned_cols=38  Identities=21%  Similarity=0.145  Sum_probs=29.3

Q ss_pred             eeecccchhhhhhcCCCcCceeechhhHHHHHHHHhHhhhhHHhhHhh
Q 021469            7 TYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL   54 (312)
Q Consensus         7 ~Ylt~~s~~~~~~~~~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~   54 (312)
                      +|++.+|..          ++|-|.++..-.-+-+|.++|..+..++-
T Consensus       152 ~Y~a~~s~~----------~dR~rA~a~~~~~~vlg~ilGp~~q~~f~  189 (488)
T KOG2325|consen  152 AYIADASTV----------EDRPRAFAATSGGFVLGIILGPTIQLAFT  189 (488)
T ss_pred             HHHHhccCc----------cchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence            566666654          78899999888888899999988876553

>PF12832 MFS_1_like: MFS_1 like family

Probab=93.99  E-value=0.2  Score=36.10  Aligned_cols=36  Identities=17%  Similarity=0.085  Sum_probs=31.2

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIV  191 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~  191 (312)
                      ..++|.++.+-.+.+.+++.+.|.+.||.++++.+.
T Consensus        34 ~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l   69 (77)
T PF12832_consen   34 PSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVIL   69 (77)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHH
Confidence            467899999999999999999999999998765443

>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]

Probab=93.70  E-value=1.6  Score=42.63  Aligned_cols=146  Identities=14%  Similarity=0.109  Sum_probs=75.9

Q ss_pred             cChhhHHHHHHHHhhhhHhhhhhhcccccc--cccccccc---hhhHHHHH----HhHHHHHHHHHHhhhhcCCCChhhH
Q 021469          120 ADVRMLLIIPLFAYSGLQQAFVWAEFTKEI--VTPALGVS---GVGGAMAV----YGAFDAICSLAAGRLTTGLPSITFI  190 (312)
Q Consensus       120 ~~~~~lll~p~~~~~G~~~~f~~~~~~~~~--~s~~lg~~---~~g~v~~~----~g~~~~ig~~~~G~l~d~~~~~~~~  190 (312)
                      ...+++.+.|..+...+.........+...  ..|+.+.+   ..+.....    .|+...+.+...|-++||+|||.++
T Consensus        16 ~~~~~~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L   95 (463)
T KOG2816|consen   16 RLASMRHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVL   95 (463)
T ss_pred             ccchhhHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhH
Confidence            344456666666665555444433222211  24444332   12333333    3778899999999999999987544


Q ss_pred             HHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHH
Q 021469          191 VSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVV  269 (312)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~  269 (312)
                      .+--....+......+..          ++.+++.-+.| +.++......+..++...+ ++....++....-.++.+++
T Consensus        96 ~~~~~~~~l~~~~~~~~~----------~~~~~~~~l~g-~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~  164 (463)
T KOG2816|consen   96 LLPLFGTILPALCLLFQG----------YWFFLLLGLSG-GFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIG  164 (463)
T ss_pred             HHHHHHHHHhHHHHHHHH----------HHHhhhccccc-chhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHH
Confidence            221111111122222211          22333222222 2333345555566665543 33467888888778888888


Q ss_pred             HHhhhhh
Q 021469          270 FFIGPYI  276 (312)
Q Consensus       270 f~~~~~l  276 (312)
                      ...+..+
T Consensus       165 p~~~~~~  171 (463)
T KOG2816|consen  165 PALGGYL  171 (463)
T ss_pred             HHHHHHH
Confidence            8887764

>KOG3762 consensus Predicted transporter [General function prediction only]

Probab=93.35  E-value=9.2  Score=37.97  Aligned_cols=184  Identities=14%  Similarity=0.189  Sum_probs=105.6

Q ss_pred             HHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhc---ccccccccccccc-hhhHHHHHHhHHHHHHHHHHhhhhcCCC
Q 021469          110 SLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAE---FTKEIVTPALGVS-GVGGAMAVYGAFDAICSLAAGRLTTGLP  185 (312)
Q Consensus       110 ~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~---~~~~~~s~~lg~~-~~g~v~~~~g~~~~ig~~~~G~l~d~~~  185 (312)
                      ...+...|++.+++.++++...+..|...++..+.   ..+.+.    |.+ --|.+-+.--.+|++.=++.+|+++|+|
T Consensus       359 ~v~a~~~~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~----~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiG  434 (618)
T KOG3762|consen  359 SVLADVGKVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLG----GIKTLFGVVSALCHAGEILFYFFSFKLIEKIG  434 (618)
T ss_pred             HHHHHHHHHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcC----CcceeeeehhhhhccchHHHHHHHHHHHHHhc
Confidence            33444558999999998888888888877776542   111110    100 0122223333468888888899999998


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHHH-HHH
Q 021469          186 SITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKV-WQC  263 (312)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~-~qs  263 (312)
                      +-+ ++.+++....+=|+..  .+-.+     +|....+=++-|+..+..-..+-+.+....|.+- +.+-++.+. +..
T Consensus       435 Hv~-v~~lgLa~~~~Rf~~~--S~L~n-----~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~G  506 (618)
T KOG3762|consen  435 HVN-VMYLGLACNVGRFLYY--SYLQN-----PWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHG  506 (618)
T ss_pred             ccc-eeeehhhHHHHHHHHH--HHhcC-----chheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcc
Confidence            543 5556655555444432  22112     2445666777777777666666666767666433 344444443 344


Q ss_pred             HHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 021469          264 ASIAVVFFIGPY----ISLQAMLIVMVVGICVALVGILFLTIQVEK  305 (312)
Q Consensus       264 ~g~ai~f~~~~~----l~~~~~~~il~~~~~~~~~~~~~~~~~~~~  305 (312)
                      +|-.++-++...    +...+.+.+..+-+++.++.+..+-++.+|
T Consensus       507 lG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~~l~~  552 (618)
T KOG3762|consen  507 LGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQLLLKR  552 (618)
T ss_pred             cCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            455555555443    344455555555566666666666666554

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=93.18  E-value=1.4  Score=36.35  Aligned_cols=87  Identities=18%  Similarity=0.114  Sum_probs=53.3

Q ss_pred             HHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccC
Q 021469          170 DAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH  249 (312)
Q Consensus       170 ~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~  249 (312)
                      -.+++++...+.++++.|. .++++.+... .+...+ .+ |+     .+..+..+++.|++.+..-+-.-..+....++
T Consensus        50 ~~~s~l~~P~iv~~lg~K~-sm~lg~~~y~-~y~~~~-~~-~~-----~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~  120 (156)
T PF05978_consen   50 FAISCLFAPSIVNKLGPKW-SMILGSLGYA-IYIASF-FY-PN-----SYTLYPASALLGFGAALLWTAQGTYLTSYSTE  120 (156)
T ss_pred             HHHHHHhHHHHHHHHhhHH-HHHHHHHHHH-HHHHHH-Hh-hh-----HHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence            4556666677777787664 5556665554 334333 23 33     24678899999999998877777677665543


Q ss_pred             -ChhhhHHHHHHHHHHH
Q 021469          250 -DTEGAFAQLKVWQCAS  265 (312)
Q Consensus       250 -~~~~afa~~~~~qs~g  265 (312)
                       +.++..+++-.+...+
T Consensus       121 ~~~~~~~~ifw~i~~~s  137 (156)
T PF05978_consen  121 ETIGRNTGIFWAIFQSS  137 (156)
T ss_pred             HHHhhHHHHHHHHHHHH
Confidence             3345555544444333

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=93.18  E-value=4  Score=38.45  Aligned_cols=135  Identities=14%  Similarity=0.014  Sum_probs=89.1

Q ss_pred             hhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhh
Q 021469          159 VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQ  238 (312)
Q Consensus       159 ~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~  238 (312)
                      .|.....=-++-.+.+.+..+|.+|++..+ .+..+.++....-  +...+.+      .+..|.-..+-|.+-++.|..
T Consensus        49 aGlLTtLPll~fg~~ap~a~~Lar~~g~er-~l~~~Llli~~G~--~iR~~~~------~~~L~~gt~l~G~gIav~nVL  119 (395)
T COG2807          49 AGLLTTLPLLAFGLFAPAAPRLARRFGEER-SLFLALLLIAAGI--LIRSLGG------LPLLFLGTLLAGAGIAVINVL  119 (395)
T ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHHHhhHH-HHHHHHHHHHHHH--HHHhccc------HHHHHHHHHHHHhhHHHHHHh
Confidence            344443334444556667778888887544 3334443333221  1112221      135788899999999999999


Q ss_pred             hHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhhh-----HHHHHHHHHHHHHHHHHHHHHhhhh
Q 021469          239 LSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYIS-----LQAMLIVMVVGICVALVGILFLTIQ  302 (312)
Q Consensus       239 ~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l~-----~~~~~~il~~~~~~~~~~~~~~~~~  302 (312)
                      +++++=..||++.....++|....++|++.+-..+..+.     .+.-+.+-....+++.+.++.-..|
T Consensus       120 LPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~r  188 (395)
T COG2807         120 LPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQALR  188 (395)
T ss_pred             hhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhccc
Confidence            999999999998888999999999999999998887652     2223444445666666666665433

>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]

Probab=93.11  E-value=0.039  Score=53.07  Aligned_cols=33  Identities=18%  Similarity=0.295  Sum_probs=28.6

Q ss_pred             CcCceeechhhHHHHHHHHhHhhhhHHhhHhhc
Q 021469           23 HEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK   55 (312)
Q Consensus        23 ~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~   55 (312)
                      +.+++||.+.+..+++...+.+.|++++..+..
T Consensus       173 an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~  205 (538)
T KOG0252|consen  173 ANKKTRGAFIAAVFAMQGFGILAGGIVALIVSA  205 (538)
T ss_pred             hhhccccceeEEEEEecchhHhhccHHHHHHHH
Confidence            345799999999999999999999999877653

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=93.06  E-value=0.0038  Score=59.85  Aligned_cols=113  Identities=12%  Similarity=0.052  Sum_probs=79.1

Q ss_pred             hhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhh
Q 021469          159 VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQ  238 (312)
Q Consensus       159 ~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~  238 (312)
                      .+.+....-++..+|+++.|.+.||+|||+ .+.++.++..++.++.  .+.++.  .+++...+.-++.|++-+...+.
T Consensus        48 ~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~-~~~~~~~~~~i~~~~~--~~~~~~--~~~~~~~~~R~~~G~~~g~~~~~  122 (451)
T PF00083_consen   48 SSLLTSSFFIGAIVGALIFGFLADRYGRKP-ALIISALLMIIGSILI--AFAPSY--NNFWMLLIGRFLIGFGIGGAYVV  122 (451)
T ss_pred             HHHHHHHHHhhhcccccccccccccccccc-cccccccccccccccc--cccccc--ccccccccccccccccccccccc
Confidence            455666777889999999999999999875 4455555554443332  233311  01234566778899999998899


Q ss_pred             hHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          239 LSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       239 ~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ...++.+..|++ +....++......+|..++..+....
T Consensus       123 ~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~  161 (451)
T PF00083_consen  123 SPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIV  161 (451)
T ss_pred             ccccccccccccccccccccccccccccccccccccccc
Confidence            888888887654 45667788888888888887776543

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions

Probab=91.99  E-value=1.6  Score=42.81  Aligned_cols=155  Identities=14%  Similarity=0.007  Sum_probs=80.3

Q ss_pred             ceeechhhHHHHHHHHhHhhhhHHhhHhhc-CCCCc---CCCCchhhHHHHHHHHHHHHHHHH---hccC-----Ccccc
Q 021469           26 TVIGSFNGEFWGMFASHQFVGNLITLAVLK-DDKGG---STSGTTLLFIVFLGVITLGTILMC---FLRK-----EEDKG   93 (312)
Q Consensus        26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~-~~~~~---~~~~~~~~~~if~~i~~~g~~l~l---fL~~-----~~~~~   93 (312)
                      ++-.|+.+.+-..-|.|.++||-....+.+ ..+..   .+.....+-..+..+.+.|.++..   .+.+     |+.. 
T Consensus       176 ~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~-  254 (491)
T PF03219_consen  176 EEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFY-  254 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccc-
Confidence            456799999999999999999987766554 11110   011111232333334444443332   2321     2211 


Q ss_pred             ccchhhcchhhhhHHHHHHHHHHH-hhcChhhHHHHHHHHhhhhHhhhhhhccc----ccccccccccchhhHHHHHHhH
Q 021469           94 EKETADASVNFYSYLVSLSKSITT-LLADVRMLLIIPLFAYSGLQQAFVWAEFT----KEIVTPALGVSGVGGAMAVYGA  168 (312)
Q Consensus        94 ~~~~~~~~~~~~~s~~~~~~~~~~-~~~~~~~lll~p~~~~~G~~~~f~~~~~~----~~~~s~~lg~~~~g~v~~~~g~  168 (312)
                      +++.++.+.+++.+++|    .++ ++++|-++.+.-+.+..|+.....-..+-    ..+.++.--.+..|-.....|+
T Consensus       255 ~~~~~~kk~k~k~s~~e----s~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGi  330 (491)
T PF03219_consen  255 PSAKKKKKKKPKMSLKE----SFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGI  330 (491)
T ss_pred             hhhhcccccCCCccHHH----HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHH
Confidence            11111112223334444    444 46788888887777777766554432111    1111110001234555556777


Q ss_pred             HHHHHHHHHhhhhcCCC
Q 021469          169 FDAICSLAAGRLTTGLP  185 (312)
Q Consensus       169 ~~~ig~~~~G~l~d~~~  185 (312)
                      ..++..++++.+.+|+|
T Consensus       331 vtii~~~l~~~iir~~G  347 (491)
T PF03219_consen  331 VTIIMMFLSSNIIRRFG  347 (491)
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            77888888888888766

One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=91.52  E-value=14  Score=35.73  Aligned_cols=251  Identities=10%  Similarity=0.070  Sum_probs=120.8

Q ss_pred             cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHH-HHhccC-----Cc-----cc
Q 021469           24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRK-----EE-----DK   92 (312)
Q Consensus        24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l-~lfL~~-----~~-----~~   92 (312)
                      +++...+.++..=-+=+.+.++|.++...+....+.      ..-.++..+.+.++.+. ..++..     |+     ++
T Consensus       143 ~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~------~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~  216 (432)
T PF06963_consen  143 DPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASP------VIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRS  216 (432)
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCC
Confidence            445677788877777789999999888777653321      23344556666666655 334421     11     11


Q ss_pred             cccc-hhhc----chhhhhHHHHHHHHHHHh-hcChhhHHHHHHHHhhhhHhhhhh------hccccccc-ccccccchh
Q 021469           93 GEKE-TADA----SVNFYSYLVSLSKSITTL-LADVRMLLIIPLFAYSGLQQAFVW------AEFTKEIV-TPALGVSGV  159 (312)
Q Consensus        93 ~~~~-~~~~----~~~~~~s~~~~~~~~~~~-~~~~~~lll~p~~~~~G~~~~f~~------~~~~~~~~-s~~lg~~~~  159 (312)
                      ++++ .++.    +..+.....+.+++.++. ..+++.-.==|.+ ..++..++.+      +.-..++. +..+....+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vf-las~alalLY~TVLsf~~lmt~yl~~~G~s~~~i  295 (432)
T PF06963_consen  217 SESESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVF-LASFALALLYFTVLSFGGLMTAYLKSQGYSPSVI  295 (432)
T ss_pred             ccccccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHH-HHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHH
Confidence            1111 1000    011112223333333332 2333322111111 1111111110      11111111 121222346


Q ss_pred             hHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHh-cccCCCCC-CCchHHHHH------HHHHHhh
Q 021469          160 GGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-NYSVTSGV-LGTLYPLIM------AALLGIG  231 (312)
Q Consensus       160 g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~------~~l~G~~  231 (312)
                      |..-..-.+.++.|.++..++.+|+|..+ .=..+...+..+...... .|.+.++. ......++.      ..+|++ 
T Consensus       296 gi~R~~gav~Gl~gT~~~p~l~~riGlvr-~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~f-  373 (432)
T PF06963_consen  296 GIFRGLGAVFGLLGTWVYPWLMKRIGLVR-AGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSF-  373 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcchh-hHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhh-
Confidence            66666677778889999999989987533 223455556555443321 34444331 001111111      124443 


Q ss_pred             hhHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Q 021469          232 DGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVV  287 (312)
Q Consensus       232 d~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l~~~~~~~il~~  287 (312)
                      |=+-    .-++.+.-|++ +...+++-.-+|++-..+.|.....++-..++..+..
T Consensus       374 DL~~----~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~~P~~F~~lv~  426 (432)
T PF06963_consen  374 DLAV----TQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFPRPSQFGWLVL  426 (432)
T ss_pred             hHHH----HHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccCChHhcChHHH
Confidence            3221    12333344443 3467889999999999999988776655555554443

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=91.03  E-value=7.4  Score=33.38  Aligned_cols=111  Identities=23%  Similarity=0.190  Sum_probs=66.9

Q ss_pred             hhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhh
Q 021469          158 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT  237 (312)
Q Consensus       158 ~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t  237 (312)
                      ..++.+..+.+...+++.+.|.+.||.+||+ .+..+...........  .+.++   ...+...+..+..|++.+....
T Consensus        40 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~g~~~~~~~~  113 (338)
T COG0477          40 LYGLLLSAFFLGYAIGSLLAGPLGDRYGRRK-VLIIGLLLFLLGTLLL--ALAPN---VGLALLLILRLLQGLGGGGLLP  113 (338)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhhccccccchH-HHHHHHHHHHHHHHHH--HhCcc---chHHHHHHHHHHHHhhhHHHHH
Confidence            3567777888888888899999999987663 4444443322221111  11112   1123344455558888888888


Q ss_pred             hhHhHHHHhccC--ChhhhHHHHHH-HHHHHHHHHHHhhh
Q 021469          238 QLSALLGILFKH--DTEGAFAQLKV-WQCASIAVVFFIGP  274 (312)
Q Consensus       238 ~~~~i~g~~~~~--~~~~afa~~~~-~qs~g~ai~f~~~~  274 (312)
                      ....++.+.+++  ++....+.... ...+|..++-.+..
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (338)
T COG0477         114 VASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAG  153 (338)
T ss_pred             HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            888899999886  34445555555 35555555544433

>COG3202 ATP/ADP translocase [Energy production and conversion]

Probab=90.94  E-value=17  Score=35.63  Aligned_cols=144  Identities=13%  Similarity=-0.002  Sum_probs=74.6

Q ss_pred             hhhHHHHHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhH-HHHHHHHHHhhhhcCCCChhhHHHHHHHHHHH
Q 021469          122 VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGA-FDAICSLAAGRLTTGLPSITFIVSGGAIAQVV  200 (312)
Q Consensus       122 ~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~-~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~  200 (312)
                      ||.+.+..+++..++.+++.......-+++. .|.+.++++=.+.=+ +.++...+.++++++..+++ ++.+.....+.
T Consensus        27 ~kflpl~Ll~f~I~~ny~~lR~lKDslvv~~-~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~-vF~~~~~~F~~  104 (509)
T COG3202          27 KKFLPLALLFFCILFNYNLLRSLKDSLVVTR-QGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREK-VFYIILGFFLG  104 (509)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhheEeec-CcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHH-HHHHHHHHHHH
Confidence            4567777788888888888865433222221 244444444333333 46777888899998877544 43333333333


Q ss_pred             HHHHH-Hhcc------cCCCCC------CCc------------h---HHHHHHHHHHhhhhHHhhhhHhHHHHhccC--C
Q 021469          201 VFLWI-LINY------SVTSGV------LGT------------L---YPLIMAALLGIGDGVLNTQLSALLGILFKH--D  250 (312)
Q Consensus       201 ~~~~~-~~~~------~~~~~~------~~~------------~---~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~--~  250 (312)
                      .|++. ++.|      |||+.+      .+|            |   ..|+++=+||-   ..-+.+.|-.+..-.+  +
T Consensus       105 fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgs---lV~S~lFw~faNeitt~~e  181 (509)
T COG3202         105 FFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGS---LVLSLLFWQFANEITTIEE  181 (509)
T ss_pred             HHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHH---HHHHHHHHHHHHHhhhHHH
Confidence            33321 1223      343211      011            1   35566666653   3334455544444322  2


Q ss_pred             hhhhHHHHHHHHHHHHHHHH
Q 021469          251 TEGAFAQLKVWQCASIAVVF  270 (312)
Q Consensus       251 ~~~afa~~~~~qs~g~ai~f  270 (312)
                      ..+-++++....+++.-++=
T Consensus       182 akRFy~lf~l~~ni~lllsg  201 (509)
T COG3202         182 AKRFYPLFGLGANISLLLSG  201 (509)
T ss_pred             hhhhHHHHHHHHHHHHHHHH
Confidence            24678887776655544443

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=90.40  E-value=3.4  Score=39.61  Aligned_cols=113  Identities=15%  Similarity=0.038  Sum_probs=66.8

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      .+..||.....++..++-+.+.|.+.|+.++|++.+-+.+.+-... ......-++.++   .++..+..++-..+..+-
T Consensus        57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~-~~~L~~i~~~s~---~~~~l~~~il~~i~~~~s  132 (438)
T COG2270          57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIIS-TFLLWFIPPGSY---LLLLLLFLILASIGFEFS  132 (438)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHH-HHHHHHhCCCch---HHHHHHHHHHHHHhcchh
Confidence            4577899999999999999999999999887665543332222211 111112233221   234455666666777777


Q ss_pred             hhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHh
Q 021469          236 NTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFI  272 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~  272 (312)
                      |..-++.+-+..++++ .+..+.---.-.+|+.+.+..
T Consensus       133 ~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~  170 (438)
T COG2270         133 NVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIF  170 (438)
T ss_pred             heehhhHhhhhcCccccCcccccccccccccchHHHHH
Confidence            7777888888776543 334333333344455554443

>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]

Probab=90.01  E-value=7.3  Score=37.18  Aligned_cols=113  Identities=20%  Similarity=0.181  Sum_probs=60.1

Q ss_pred             hhhHHHHH-HhHHHHHHHHHHhhhhcCCCChh-hHHHHHHHHHHHHHHHHHhcccCCCCC-CCchHHHHHHHHHHhhhhH
Q 021469          158 GVGGAMAV-YGAFDAICSLAAGRLTTGLPSIT-FIVSGGAIAQVVVFLWILINYSVTSGV-LGTLYPLIMAALLGIGDGV  234 (312)
Q Consensus       158 ~~g~v~~~-~g~~~~ig~~~~G~l~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~d~~  234 (312)
                      +.-+.+++ |-+...+|.....++.+. +||. ++..+.-.+.+-.|.  .++++|-+.. .+.++..+...++|+..+-
T Consensus       283 y~~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l~i~v~lR~lfiPlF~--~cn~~~~~v~~~~~~~~~~l~~~lglsnGY  359 (406)
T KOG1479|consen  283 YALLLVFLSFNVFDLIGSILAALLTWP-DPRKLTIPVLLRLLFIPLFL--LCNYPPLPVVFESDGWFIFLMSLLGLSNGY  359 (406)
T ss_pred             hHHHHHHHHhHHHHHhhhhhhhcccCC-CCceehHHHHHHHHHHHHHH--HhccCCCCceecCchHHHHHHHHHHhccch
Confidence            34445555 788888886655544332 2232 222222222222222  2467663322 3346788889999998876


Q ss_pred             HhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhh
Q 021469          235 LNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIG  273 (312)
Q Consensus       235 ~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~  273 (312)
                      .-+..-...-+..|++ +|.|-.+..++-..|.+.+-.++
T Consensus       360 ltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s  399 (406)
T KOG1479|consen  360 LTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS  399 (406)
T ss_pred             HhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence            6554443333333322 24556666777777766665544

>TIGR01272 gluP glucose/galactose transporter

Probab=89.99  E-value=3.2  Score=37.93  Aligned_cols=57  Identities=16%  Similarity=0.114  Sum_probs=48.9

Q ss_pred             hHHHHHHHHHHhhhhHHhhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          219 LYPLIMAALLGIGDGVLNTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       219 ~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      ....+..++.|.|-+..|+..+..+..+.++ +.++..+..+.++++|..++=.+.+.
T Consensus        11 ~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~   68 (310)
T TIGR01272        11 VLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGS   68 (310)
T ss_pred             HHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            3567788999999999999999999999765 45678999999999999998887764

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions

Probab=89.50  E-value=23  Score=34.90  Aligned_cols=70  Identities=10%  Similarity=0.034  Sum_probs=41.5

Q ss_pred             ChhhHHHHHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhH-HHHHHHHHHhhhhcCCCChhhHHH
Q 021469          121 DVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGA-FDAICSLAAGRLTTGLPSITFIVS  192 (312)
Q Consensus       121 ~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~-~~~ig~~~~G~l~d~~~~~~~~~~  192 (312)
                      -||.+++.-+++...+.+++....-...+++. .|.+.+.++=...-+ +.++.-++..|+++++++.+ ++.
T Consensus        23 ~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~-~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~-lFy   93 (491)
T PF03219_consen   23 LKKFLPLALMFFFILFNYTILRDLKDTLVVTA-QGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREK-LFY   93 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCeEEEec-CChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH-HHH
Confidence            35667777788888888877754322222232 266666555321111 34566677889999987654 443

One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane

>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]

Probab=89.18  E-value=17  Score=33.11  Aligned_cols=199  Identities=15%  Similarity=0.101  Sum_probs=107.8

Q ss_pred             hhhHHHHHHHHHHHh-hcChhhHHHHHHHHhhhhHhhhhhh-ccccccc-ccccc--cch--hhHHHHHHhHHHHHHHHH
Q 021469          104 FYSYLVSLSKSITTL-LADVRMLLIIPLFAYSGLQQAFVWA-EFTKEIV-TPALG--VSG--VGGAMAVYGAFDAICSLA  176 (312)
Q Consensus       104 ~~~s~~~~~~~~~~~-~~~~~~lll~p~~~~~G~~~~f~~~-~~~~~~~-s~~lg--~~~--~g~v~~~~g~~~~ig~~~  176 (312)
                      +.+.+..++|.-.+. ..|.|+.+|--       .|+.+-+ .|+=.+. +.++.  .+.  -|++.+.+-+.+++|+-+
T Consensus       229 ~~kdlltqf~gaa~aiaSD~ki~LLG~-------iqsLFE~smytFVFLWTPaLspn~e~iPhGfiFatFMlASmLGSSl  301 (454)
T KOG4332|consen  229 ENKDLLTQFKGAARAIASDEKIALLGA-------IQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSL  301 (454)
T ss_pred             hhHHHHHHhhHhHHHHhcchHHHHHHH-------HHHHHhhhhheeeeeecccCCCCcccCCchhHHHHHHHHHHHhhHH
Confidence            345677788887775 67888876642       2333322 2221111 23332  222  477777888889999999


Q ss_pred             HhhhhcCCCCh-hhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhh
Q 021469          177 AGRLTTGLPSI-TFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGA  254 (312)
Q Consensus       177 ~G~l~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~a  254 (312)
                      ..++..|-..| .+.+.+.+.+...++.+-.+.....+....+...++..-++-.|-+.+-..+.-+-.++-||.. ...
T Consensus       302 a~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearsti  381 (454)
T KOG4332|consen  302 ASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTI  381 (454)
T ss_pred             HHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhh
Confidence            98887653211 1223333333333433222222222222334445555555666666666666667777777644 467


Q ss_pred             HHHHHHHHHHHHHHHHHh---hhh-hhHHHHHHHHHHHHHHHHH----HHHHhhhhhhhccCC
Q 021469          255 FAQLKVWQCASIAVVFFI---GPY-ISLQAMLIVMVVGICVALV----GILFLTIQVEKAFYS  309 (312)
Q Consensus       255 fa~~~~~qs~g~ai~f~~---~~~-l~~~~~~~il~~~~~~~~~----~~~~~~~~~~~~~~~  309 (312)
                      +..||.=.++-.|+...-   +.. ...+....+..+.+.++.+    .+..+|.-.+|++..
T Consensus       382 mNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~~~~L~~v~e~d~~~~~~~  444 (454)
T KOG4332|consen  382 MNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASILQRRLMTVVEHDKERRVPW  444 (454)
T ss_pred             hhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHHHHHHHHhhhccHhhcCCC
Confidence            888888888888877643   111 2334555555555555433    344555555444433

>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]

Probab=88.91  E-value=8.1  Score=36.82  Aligned_cols=131  Identities=10%  Similarity=-0.064  Sum_probs=78.4

Q ss_pred             hhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHh-cccCCCCCCCchHHHHHHHHHHhhhhHHhh
Q 021469          159 VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGVLNT  237 (312)
Q Consensus       159 ~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t  237 (312)
                      ..++..+.-.+-.+++...|.+.|+++||+ -+.+.++...   +..++ ...|+     .....+...+||+|-+. ..
T Consensus       115 ~~llt~~v~~gmllga~~w~l~~d~~grr~-~f~~T~l~t~---v~~~is~~spn-----f~~L~~f~~l~~~g~gg-~p  184 (528)
T KOG0253|consen  115 APLLTLSVFLGMLVGAMVWGLSADTIGRRK-GFNLTFLVTG---VFGVISGASPN-----FASLCVFRALWGFGVGG-LP  184 (528)
T ss_pred             hhHHHHHHHhhhhhhhhhhheehhhhhcch-hhhhhHHHHH---HHHHhhcCCCC-----eehhhHHHHHHhccCCC-cc
Confidence            345555566678899999999999999775 3333333322   22222 23333     23456677778887777 56


Q ss_pred             hhHhHHHHhccCChh----hhHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHh
Q 021469          238 QLSALLGILFKHDTE----GAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFL  299 (312)
Q Consensus       238 ~~~~i~g~~~~~~~~----~afa~~~~~qs~g~ai~f~~~~~l~~~~~~~il~~~~~~~~~~~~~~  299 (312)
                      +..++.+..-|..+.    ..++.+-.-|....+++++.-+.+...+-+.....-+.+...+++|+
T Consensus       185 v~~~~yle~lp~~~r~~~~V~~~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~  250 (528)
T KOG0253|consen  185 VDSAIYLEFLPSSHRWLLTVMSFFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWV  250 (528)
T ss_pred             HhHHHHHHhccCcCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhc
Confidence            667777776665432    23455555566667777777666666665555554444444444444

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=88.71  E-value=25  Score=34.39  Aligned_cols=66  Identities=14%  Similarity=0.035  Sum_probs=35.6

Q ss_pred             hhHHHHHHHHhhhhHhhhhhhccccccccc-ccccchhhHHHHHHhHH-HHHHHHHHhhhhcCCCChh
Q 021469          123 RMLLIIPLFAYSGLQQAFVWAEFTKEIVTP-ALGVSGVGGAMAVYGAF-DAICSLAAGRLTTGLPSIT  188 (312)
Q Consensus       123 ~~lll~p~~~~~G~~~~f~~~~~~~~~~s~-~lg~~~~g~v~~~~g~~-~~ig~~~~G~l~d~~~~~~  188 (312)
                      |.+++.-+++...+.+......+....++. .-|.+.+.+.-...-+- .++...+.+++.+|++|++
T Consensus         8 k~~~~~l~fF~il~~Y~iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~   75 (472)
T TIGR00769         8 KFLPLFLMFFCILFNYTILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEA   75 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence            445555566666666666654443333221 12445555544322222 2333677899999998664

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>COG3202 ATP/ADP translocase [Energy production and conversion]

Probab=88.63  E-value=26  Score=34.39  Aligned_cols=33  Identities=12%  Similarity=-0.086  Sum_probs=28.2

Q ss_pred             ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCC
Q 021469           26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK   58 (312)
Q Consensus        26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~   58 (312)
                      +.-.|+.+.|-.+.|.|.++++.+.....+..+
T Consensus       180 ~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~  212 (509)
T COG3202         180 EEAKRFYPLFGLGANISLLLSGEVTSWLSKHRD  212 (509)
T ss_pred             HHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchh
Confidence            456799999999999999999999888876544

>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT)

Probab=88.33  E-value=12  Score=36.18  Aligned_cols=31  Identities=19%  Similarity=0.379  Sum_probs=25.2

Q ss_pred             hHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC
Q 021469          219 LYPLIMAALLGIGDGVLNTQLSALLGILFKHD  250 (312)
Q Consensus       219 ~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~  250 (312)
                      +..+++.++.|++++..|+..+.+.+. +|++
T Consensus       107 ~~~~~~v~~~g~~~~~~q~s~~gla~~-fp~~  137 (437)
T TIGR00939       107 VTTMASVVIINSGMALLQGSLFGLAGV-FPST  137 (437)
T ss_pred             HHHHHHHHHHHhhhhhhcccchhhccc-CCHH
Confidence            356778889999999999999998875 6643

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=87.54  E-value=30  Score=33.93  Aligned_cols=104  Identities=16%  Similarity=0.089  Sum_probs=66.4

Q ss_pred             HHHHHHHhhhhcCCC-ChhhH-HHHHHHHHHHHHHHHHhc--ccCC-CCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHH
Q 021469          171 AICSLAAGRLTTGLP-SITFI-VSGGAIAQVVVFLWILIN--YSVT-SGVLGTLYPLIMAALLGIGDGVLNTQLSALLGI  245 (312)
Q Consensus       171 ~ig~~~~G~l~d~~~-~~~~~-~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~  245 (312)
                      .+.+.+..++.++-+ .+.++ +.++..+....|+.+...  +.-+ ++....++....+++.++++=+....--+...+
T Consensus       342 pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~  421 (498)
T COG3104         342 PILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTK  421 (498)
T ss_pred             HHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            344444555544321 12222 566766666666544322  2222 223334667788999999998888888888888


Q ss_pred             hccCCh-hhhHHHHHHHHHHHHHHHHHhhh
Q 021469          246 LFKHDT-EGAFAQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       246 ~~~~~~-~~afa~~~~~qs~g~ai~f~~~~  274 (312)
                      +-|..- ..+++++-+..++|+.++=-+++
T Consensus       422 laP~~~~s~~ma~wfLt~a~~~~l~g~va~  451 (498)
T COG3104         422 LAPPALKSFIMAMWFLTVAAGQTLGGQVAG  451 (498)
T ss_pred             hChHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence            887543 57899999998888888777666

>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS)

Probab=87.43  E-value=14  Score=33.19  Aligned_cols=28  Identities=7%  Similarity=-0.110  Sum_probs=16.3

Q ss_pred             HHHHHHhHHHHHHHHHHhhhhcC-CCChh
Q 021469          161 GAMAVYGAFDAICSLAAGRLTTG-LPSIT  188 (312)
Q Consensus       161 ~v~~~~g~~~~ig~~~~G~l~d~-~~~~~  188 (312)
                      ...+++-.+-.+|.+..|...+. .+||+
T Consensus       145 ~~~I~fv~g~~~G~~~ig~~nkt~~kRk~  173 (267)
T PF07672_consen  145 IFQILFVAGYFLGPFTIGLWNKTNYKRKP  173 (267)
T ss_pred             HHHHHHHHHHhhhceeeccchhhhhhhhh
Confidence            33444555556677788877663 35554

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=87.01  E-value=7.5  Score=37.48  Aligned_cols=100  Identities=12%  Similarity=0.050  Sum_probs=55.0

Q ss_pred             HHHHhhhhcCCC----ChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccC
Q 021469          174 SLAAGRLTTGLP----SITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH  249 (312)
Q Consensus       174 ~~~~G~l~d~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~  249 (312)
                      -.+.|.++|.++    ||++-++++.++......... ..+...+..  ..+.+..++-.+|-+.-....-++..+..++
T Consensus        41 Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~-~~~~~~~s~--~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~  117 (433)
T PF03092_consen   41 KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLA-LLPASESSA--AIAVVLLFLASFGYAFADVAADALVVELARR  117 (433)
T ss_pred             hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHH-hcccccchh--hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhc
Confidence            457789999653    455556667666543332221 233211111  1233333444455555556566666666543


Q ss_pred             Ch---hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          250 DT---EGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       250 ~~---~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ++   .+.-+....+.++|..++..+++.+
T Consensus       118 ~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l  147 (433)
T PF03092_consen  118 EPESRGDLQSFVWGVRSVGSLVGSLLSGPL  147 (433)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence            33   2345677778888998888777654

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]

Probab=82.36  E-value=54  Score=32.42  Aligned_cols=75  Identities=12%  Similarity=0.146  Sum_probs=42.6

Q ss_pred             hhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccc--cccccccchhhHH-HHHHhHHHHHHHHHHhhhh
Q 021469          105 YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEI--VTPALGVSGVGGA-MAVYGAFDAICSLAAGRLT  181 (312)
Q Consensus       105 ~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~--~s~~lg~~~~g~v-~~~~g~~~~ig~~~~G~l~  181 (312)
                      ..+.++.-+.+++.+|-|.++.++-+.+..-  .+|..++=.+.+  +...+..+..... .+.+. .|++.++..||..
T Consensus       261 ~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~K--igF~a~da~T~LKLlEkG~~KE~LAl~~li~~P-~qii~~~~~~Kws  337 (544)
T PF13000_consen  261 ILSIKDVYKSLWKILKLPNVQTLIIILLTAK--IGFQANDAVTSLKLLEKGLSKEDLALLVLIDFP-FQIILPYYIGKWS  337 (544)
T ss_pred             hhhHHHHHHHHHHHHcCchHHHHHHHHHHHH--hccccchhhhHHHHHHcCCCHHHhHHHHHHhhh-HHHHHHHHhhhhh
Confidence            3578888899999999999988876655543  344444322221  1222222333222 22222 4677777777765


Q ss_pred             c
Q 021469          182 T  182 (312)
Q Consensus       182 d  182 (312)
                      .
T Consensus       338 ~  338 (544)
T PF13000_consen  338 A  338 (544)
T ss_pred             c
Confidence            3

This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	312
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 2e-05
 Identities = 30/206 (14%), Positives = 54/206 (26%), Gaps = 77/206 (37%)

Query: 1   MGWRGGTYLTAAALSHASNHKLHEGTVIGSFNGE-FWGMFASHQFVGNLITLAVLKDDKG 59
           +   G T++         ++K+         + + FW            + L        
Sbjct: 158 VLGSGKTWVALDVC---LSYKVQC-----KMDFKIFW------------LNL-------K 190

Query: 60  GSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLL 119
              S  T+L             ++  L  + D      +D S N    + S+   +  LL
Sbjct: 191 NCNSPETVL------------EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238

Query: 120 AD---VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAIC-SL 175
                   LL+        L    V      +                   AF+  C  L
Sbjct: 239 KSKPYENCLLV--------LLN--VQ---NAKAWN----------------AFNLSCKIL 269

Query: 176 AAGRLTTGLPSITFIVSGGAIAQVVV 201
               LTT    +T  +S      + +
Sbjct: 270 ----LTTRFKQVTDFLSAATTTHISL 291

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	312
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	99.42
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	99.34
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.01
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	98.91
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	98.78
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	98.75
2cfq_A	417	Lactose permease; transport, transport mechanism,	98.67
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	98.65
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	98.54
2xut_A	524	Proton/peptide symporter family protein; transport	98.53
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	98.41
2xut_A	524	Proton/peptide symporter family protein; transport	98.24
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	97.55
2cfq_A	417	Lactose permease; transport, transport mechanism,	97.03

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=99.42  E-value=3.5e-11  Score=113.02  Aligned_cols=264  Identities=10%  Similarity=-0.027  Sum_probs=155.9

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHH-HHhccCCcccccc---chhhc
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEK---ETADA  100 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l-~lfL~~~~~~~~~---~~~~~  100 (312)
                      +++|++..|+.....+.+.++|..+...+....+     ..+..|.+..++.++..++ .+++|+++++.+.   ++.+.
T Consensus       150 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-----~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (451)
T 1pw4_A          150 QKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFN-----DWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKN  224 (451)
T ss_dssp             TTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTC-----CSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCSCTTTCC
T ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cHHHHHHHHHHHHHHHHHHHHhhccCCHhhcCCCChhhhcc
Confidence            4789999999999999999999988866543211     1234555655555555444 3556553322111   10000


Q ss_pred             c----hhhhhHHHHHHHH--HHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHH
Q 021469          101 S----VNFYSYLVSLSKS--ITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAI  172 (312)
Q Consensus       101 ~----~~~~~s~~~~~~~--~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~i  172 (312)
                      +    .++...-+...++  ..+.+++|+++.+....+..++.........+. +..+..|  ....|++....++++++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~  303 (451)
T 1pw4_A          225 DYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPT-YLKEVKHFALDKSSWAYFLYEYAGIP  303 (451)
T ss_dssp             C-------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH-HBTTBSCCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccchhhhhcccccccchHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence            0    0000000011111  245678888766555444443332222222221 1122223  34578889999999999


Q ss_pred             HHHHHhhhhcCC--CChhhHHHHHHHHHH-HHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccC
Q 021469          173 CSLAAGRLTTGL--PSITFIVSGGAIAQV-VVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH  249 (312)
Q Consensus       173 g~~~~G~l~d~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~  249 (312)
                      ++++.|++.||+  ++|+ .+.++.++.. .++.+ + .+.++.   +.+...+..++.|++.+..+...+.++.+.+|+
T Consensus       304 ~~~~~g~l~~~~~~~~~~-~~~~~~~~~~~~~~~~-~-~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  377 (451)
T 1pw4_A          304 GTLLCGWMSDKVFRGNRG-ATGVFFMTLVTIATIV-Y-WMNPAG---NPTVDMICMIVIGFLIYGPVMLIGLHALELAPK  377 (451)
T ss_dssp             HHHHHHHHHHHTSTTCHH-HHHHHHHHHHHHHHHH-T-TSCCTT---CHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHHhcCCch-hHHHHHHHHHHHHHHH-H-HHhccc---CHHHHHHHHHHHHHHHhchHHHHHHHHHHHhch
Confidence            999999999998  7665 4334433333 33222 2 222221   134566778888999888888888999999986


Q ss_pred             C-hhhhHHHHHHHHHH-HHHHHHHhhhhh----hHHHHHHHHHHHHHHHHHHHHHhh
Q 021469          250 D-TEGAFAQLKVWQCA-SIAVVFFIGPYI----SLQAMLIVMVVGICVALVGILFLT  300 (312)
Q Consensus       250 ~-~~~afa~~~~~qs~-g~ai~f~~~~~l----~~~~~~~il~~~~~~~~~~~~~~~  300 (312)
                      + +..++++......+ |.+++-.+.+.+    .....+++..++.+++.+......
T Consensus       378 ~~~g~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  434 (451)
T 1pw4_A          378 KAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM  434 (451)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            5 56899999999999 998888776653    233344555556666666555543

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=99.34  E-value=8.5e-11  Score=110.05  Aligned_cols=235  Identities=9%  Similarity=0.012  Sum_probs=137.1

Q ss_pred             cCceeechhhHHHHHHHHhHhhhhHHhhHhh-cCCCCcCCC-------------------CchhhHHHHHHHHHHHHHHH
Q 021469           24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVL-KDDKGGSTS-------------------GTTLLFIVFLGVITLGTILM   83 (312)
Q Consensus        24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~-~~~~~~~~~-------------------~~~~~~~if~~i~~~g~~l~   83 (312)
                      ++++|++..|+.....+.+.++|.++...+. .......++                   ..+..|.+..++..+..++.
T Consensus       147 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~  226 (438)
T 3o7q_A          147 PESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLI  226 (438)
T ss_dssp             CSTTHHHHHHHHHHHHHHHHHHHHHHTTHHHHTSSCCCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence            3478999999999999999999999987776 332110000                   02345555555555555555


Q ss_pred             HhccCCccccccchhhcchhhhhHHHHHHHHHHHhhcChhhHHHHHHH-HhhhhHhhhhhhcccccccccccc--cchhh
Q 021469           84 CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLF-AYSGLQQAFVWAEFTKEIVTPALG--VSGVG  160 (312)
Q Consensus        84 lfL~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~lll~p~~-~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g  160 (312)
                      ++.+.|+.++++++++    ++.+.++   +..+++++|+.+...... ++.+...++. ...+.-+..+..|  ....+
T Consensus       227 ~~~~~p~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~  298 (438)
T 3o7q_A          227 MLTKFPALQSDNHSDA----KQGSFSA---SLSRLARIRHWRWAVLAQFCYVGAQTACW-SYLIRYAVEEIPGMTAGFAA  298 (438)
T ss_dssp             HHCCCCCCTTTCCCCS----STTSHHH---HHHHHTTCSHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSTTCCHHHHH
T ss_pred             HHHcCCcccccccccc----cccchhh---hHHHHHhChHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhccCCcchhHHH
Confidence            5555555443321111    1111222   233467788876555443 3333222221 1111110222223  34678


Q ss_pred             HHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhH
Q 021469          161 GAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLS  240 (312)
Q Consensus       161 ~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~  240 (312)
                      +.....+++.+++.++.|++.||++||+ ++.++.++......+..  +.++      ....+..++.|++.+......+
T Consensus       299 ~~~~~~~~~~~~~~~~~g~l~~r~~~~~-~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~g~~~~~~~~~~~  369 (438)
T 3o7q_A          299 NYLTGTMVCFFIGRFTGTWLISRFAPHK-VLAAYALIAMALCLISA--FAGG------HVGLIALTLCSAFMSIQYPTIF  369 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSCHHH-HHHHHHHHHHHHHHHHH--HCCH------HHHHHHHHHHHHHHTTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcchH-HHHHHHHHHHHHHHHHH--HcCC------cHHHHHHHHHHHHHHHHHHHHH
Confidence            8888999999999999999999998765 44455444444333222  2222      2245556888898888888888


Q ss_pred             hHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          241 ALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       241 ~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      .+..+.+|+++..+.+... ...+|.+++-.+.+.+
T Consensus       370 ~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~g~l  404 (438)
T 3o7q_A          370 SLGIKNLGQDTKYGSSFIV-MTIIGGGIVTPVMGFV  404 (438)
T ss_dssp             HHHHSSCGGGHHHHHHHHH-HTTHHHHHHHHHHHHH
T ss_pred             HHHHhhccccccchhhHHH-HHHHHHHHHHHHHHHH
Confidence            8888888876655555544 5557777666665544

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.01  E-value=1.9e-08  Score=95.66  Aligned_cols=146  Identities=15%  Similarity=0.064  Sum_probs=91.9

Q ss_pred             hhhHHHHHHhHHHHHHHHHHhhhhcCCCChhh----HHHHHHHHHHHHHHHHHh-c-ccCCCCCCCchHHHHHHHHHHhh
Q 021469          158 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITF----IVSGGAIAQVVVFLWILI-N-YSVTSGVLGTLYPLIMAALLGIG  231 (312)
Q Consensus       158 ~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~----~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~l~G~~  231 (312)
                      ..++.....++..++++.+.|++.||++||+.    .+..+.++...++.+... . ...+.+..++++..+..++.|++
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~l~~r~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~  399 (491)
T 4aps_A          320 PVSWFQSLNPLFIMLYTPFFAWLWTAWKKNQPSSPTKFAVGLMFAGLSFLLMAIPGALYGTSGKVSPLWLVGSWALVILG  399 (491)
T ss_dssp             CSGGGTTHHHHHHHHHHHHHHHHHHHTTTC---CHHHHHHHHHHHHHHHTTTHHHHHHCCCCTTCCTHHHHHHHHHHHHH
T ss_pred             CHHHHhccchHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHH
Confidence            45666677888899999999999999987632    223444444444332211 1 11111111234566778899999


Q ss_pred             hhHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhhh---HHHHHHHHHHHHHHHHHHHHHhhhhh
Q 021469          232 DGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS---LQAMLIVMVVGICVALVGILFLTIQV  303 (312)
Q Consensus       232 d~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l~---~~~~~~il~~~~~~~~~~~~~~~~~~  303 (312)
                      .+......+.++.+.+|++ +..+.+++.....+|.+++-.+.+.+.   ......+..++.+++.+..+....+.
T Consensus       400 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  475 (491)
T 4aps_A          400 EMLISPVGLSVTTKLAPKAFNSQMMSMWFLSSSVGSALNAQLVTLYNAKSEVAYFSYFGLGSVVLGIVLVFLSKRI  475 (491)
T ss_dssp             HHTTTTHHHHHHHHHTTTTCSSSSTHHHHHHHHHHHHHHHHHGGGGGGSSTTHHHHHTHHHHHHHHHHHHHC----
T ss_pred             HHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9998888999999999865 467899999999999999988877652   22233444444444444444443333

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=98.91  E-value=8.7e-10  Score=101.30  Aligned_cols=227  Identities=14%  Similarity=0.013  Sum_probs=130.2

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcchh
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVN  103 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~~  103 (312)
                      +++|++..++.....+.+.++|..+...+....      ..+..|.+..++..+..++. .++|+++++++++ +    +
T Consensus       119 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~  187 (375)
T 2gfp_A          119 RTQLRHANSLLNMGILVSPLLAPLIGGLLDTMW------NWRACYLFLLVLCAGVTFSMARWMPETRPVDAPR-T----R  187 (375)
T ss_dssp             TSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCHH------HHHHHHHHHHHHHHHHHCCCCCSSCCCSTTTCCC-C----C
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhc------cHHHHHHHHHHHHHHHHHHHHHHCcccCCCCccc-c----c
Confidence            468999999999999999999998887664311      12345555555444444322 3344332222111 0    1


Q ss_pred             hhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhh
Q 021469          104 FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLT  181 (312)
Q Consensus       104 ~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~  181 (312)
                      +.+++       .+.+++|+.+.+....+..+..........+. +..+..|  ....|+.....+++.++++.+.|++.
T Consensus       188 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~  259 (375)
T 2gfp_A          188 LLTSY-------KTLFGNSGFNCYLLMLIGGLAGIAAFEACSGV-LMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPN  259 (375)
T ss_dssp             TTTCS-------THHHHHHHHHHHHHHHHHHHHHHHHHHHHCSC-SSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTTT
T ss_pred             HHHHH-------HHHhcCcchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11111       23445666655444333333222222222222 2122223  34578888889999999999999998


Q ss_pred             cCCCChhhHHHHHHHH-HHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHH
Q 021469          182 TGLPSITFIVSGGAIA-QVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKV  260 (312)
Q Consensus       182 d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~  260 (312)
                      ||++++  . ..+..+ ...+.......+.+++   +++...+..++.|++.+..+...+.+..+..|+++.++.++.+.
T Consensus       260 ~r~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~  333 (375)
T 2gfp_A          260 KRFSTL--M-WQSVICCLLAGLLMWIPDWFGVM---NVWTLLVPAALFFFGAGMLFPLATSGAMEPFPFLAGTAGALVGG  333 (375)
T ss_dssp             THHHHH--H-HHHHHHHHHTSSSSSHHHHHHHH---HHHHHHHHHHHHHHHHHHTSSTTHHHHHTHHHHHHHHHHHHHHH
T ss_pred             HHHHHH--H-HHHHHHHHHHHHHHHHHhhhccc---cHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcccchHHHHHHH
Confidence            886532  2 222222 1111110000110010   12345677888999999999999999999888666789999999


Q ss_pred             HHHHHHHHHHHhhhhh
Q 021469          261 WQCASIAVVFFIGPYI  276 (312)
Q Consensus       261 ~qs~g~ai~f~~~~~l  276 (312)
                      .+.+|..++-.+.+.+
T Consensus       334 ~~~~g~~~~~~~~g~l  349 (375)
T 2gfp_A          334 LQNIGSGVLASLSAML  349 (375)
T ss_dssp             HHHHHHHCCSTTCTHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9888887766655544

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=98.78  E-value=8.8e-07  Score=83.98  Aligned_cols=111  Identities=13%  Similarity=0.030  Sum_probs=64.9

Q ss_pred             hHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHH-HhcccCCCCCCCchHHHHHHHHH-HhhhhHHhh
Q 021469          160 GGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI-LINYSVTSGVLGTLYPLIMAALL-GIGDGVLNT  237 (312)
Q Consensus       160 g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~-G~~d~~~~t  237 (312)
                      .......++...+++++.+.+.||++||+.. ..+......+...+ ......+.    .....+...++ +.....+..
T Consensus       315 ~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~-~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  389 (491)
T 4gc0_A          315 LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQ-IIGALGMAIGMFSLGTAFYTQAP----GIVALLSMLFYVAAFAMSWGP  389 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCSHHHH-HHHHHHHHHHHHHHHHHHHTTCC----HHHHHHHHHHHHHHHHTTTTH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcCcchh-ccchHHHHHHHHHHHHHHhcccc----hHHHHHHHHHHHHHHHhHHHH
Confidence            4445567888999999999999999987633 34443333332221 11121111    11222222222 222233445


Q ss_pred             hhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          238 QLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       238 ~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      ..+.+.++.||.+ +..+.++....+.++..++-...|.
T Consensus       390 ~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~  428 (491)
T 4gc0_A          390 VCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPM  428 (491)
T ss_dssp             HHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             HHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6677888899865 4678888888888888777655554

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=98.75  E-value=3.5e-07  Score=85.24  Aligned_cols=116  Identities=12%  Similarity=0.049  Sum_probs=90.1

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHh-cccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGV  234 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~d~~  234 (312)
                      ..++|++...+.++.++++.+.|++.||++||+ .+.++.++.....++... ...++     .+..++..++.|++.+.
T Consensus        60 ~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~-~l~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~~~l~G~~~~~  133 (438)
T 3o7q_A           60 NFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKA-GIITGLFLYALGAALFWPAAEIMN-----YTLFLVGLFIIAAGLGC  133 (438)
T ss_dssp             SHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHHH-HHHHHHHHHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchH-HHHHHHHHHHHHHHHHHhcccccc-----HHHHHHHHHHHHhhHHH
Confidence            457899999999999999999999999999775 555665555544433211 12222     34567788999999999


Q ss_pred             HhhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhhh
Q 021469          235 LNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYIS  277 (312)
Q Consensus       235 ~~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l~  277 (312)
                      .....+.++.+.+|+++ ..+++......++|..++-.+...+.
T Consensus       134 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~  177 (438)
T 3o7q_A          134 LETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI  177 (438)
T ss_dssp             HHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHH
T ss_pred             hhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998544 57899999999999999998877643

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=98.67  E-value=4.5e-08  Score=91.73  Aligned_cols=113  Identities=8%  Similarity=0.014  Sum_probs=75.3

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      ....|+.....+++++++..+.|++.||++||+ ++..+.++....+...  .+.++     ++...+..++.+++.+.+
T Consensus       258 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~-~l~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~l~~~~~~~~  329 (417)
T 2cfq_A          258 TRVFGYVTTMGELLNASIMFFAPLIINRIGGKN-ALLLAGTIMSVRIIGS--SFATS-----ALEVVILKTLHMFEVPFL  329 (417)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHH--TTCCS-----HHHHHHHTTHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHH--HHhcc-----HHHHHHHHHHHHHHHHHH
Confidence            345677777888899999999999999998765 4444554444333222  22222     233445566677777777


Q ss_pred             hhhhHhHHHHhccCCh-hhhHHH-HHHHHHHHHHHHHHhhhhh
Q 021469          236 NTQLSALLGILFKHDT-EGAFAQ-LKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       236 ~t~~~~i~g~~~~~~~-~~afa~-~~~~qs~g~ai~f~~~~~l  276 (312)
                      +.....+..+.+|++. ..+.+. +...+.+|..++-.+.+.+
T Consensus       330 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~lg~~~gp~l~G~l  372 (417)
T 2cfq_A          330 LVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNM  372 (417)
T ss_dssp             HHHHHHHHHHHSCHHHHHHHHHHHHTTTHHHHHHHHTHHHHTH
T ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHHHHHHhHHHHHhhhhHHHH
Confidence            7777788888888654 455676 5777888888777666653

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=98.65  E-value=2.7e-07  Score=86.25  Aligned_cols=116  Identities=9%  Similarity=0.062  Sum_probs=89.9

Q ss_pred             ccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhc-c-cCCCCCCCchHHHHHHHHHHhhh
Q 021469          155 GVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILIN-Y-SVTSGVLGTLYPLIMAALLGIGD  232 (312)
Q Consensus       155 g~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~l~G~~d  232 (312)
                      ....+|++..++.++..+++.+.|++.||++||+ ++.++.++...+.++.... . .++     .+..++..++.|++.
T Consensus        60 s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~-~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~~~l~G~~~  133 (451)
T 1pw4_A           60 SRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRV-FLPAGLILAAAVMLFMGFVPWATSS-----IAVMFVLLFLCGWFQ  133 (451)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHH-HHHHHHHHHHHHHHHHHHCHHHHSS-----SSHHHHHHHHHHHHH
T ss_pred             cHhHHHHHHHHHHHHHHHHHHhHHHHHHhcCchH-HHHHHHHHHHHHHHHHHhhhhcccc-----HHHHHHHHHHHHHHh
Confidence            4567899999999999999999999999999775 5556666655544433210 0 122     245778899999999


Q ss_pred             hHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          233 GVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       233 ~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      +........++.+.+|++ +..++++.....++|..++-.+...+
T Consensus       134 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l  178 (451)
T 1pw4_A          134 GMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLG  178 (451)
T ss_dssp             HHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred             hhccchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999854 46899999999999999888777653

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=98.54  E-value=6.3e-06  Score=78.10  Aligned_cols=136  Identities=15%  Similarity=0.207  Sum_probs=98.5

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcC-CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGV  234 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~  234 (312)
                      ...+|.+...+.++..+++.+.|++.|| ++||+ .+..+.++...+.++.  ...++     .+..++..++.|++.+.
T Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~l~g~~~~~  124 (491)
T 4aps_A           53 RATAASIMAIYASMVYLSGTIGGFVADRIIGARP-AVFWGGVLIMLGHIVL--ALPFG-----ASALFGSIILIIIGTGF  124 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHH-HHHHHHHHHHHHHHHH--HSCCS-----TTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccccchH-HHHHHHHHHHHHHHHH--HHhhh-----HHHHHHHHHHHHHHHHh
Confidence            3568899999999999999999999999 89775 5556666655544433  23222     24567788899999999


Q ss_pred             HhhhhHhHHHHhccCCh---hhhHHHHHHHHHHHHHHHHHhhhhh----hHHHHHHHHHHHHHHHHHHHHHh
Q 021469          235 LNTQLSALLGILFKHDT---EGAFAQLKVWQCASIAVVFFIGPYI----SLQAMLIVMVVGICVALVGILFL  299 (312)
Q Consensus       235 ~~t~~~~i~g~~~~~~~---~~afa~~~~~qs~g~ai~f~~~~~l----~~~~~~~il~~~~~~~~~~~~~~  299 (312)
                      .......++++.+|+++   ..+++.+....++|..++-.+...+    ..++.+++..+..+++.+.+...
T Consensus       125 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~  196 (491)
T 4aps_A          125 LKPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAPLIVGAAQEAAGYHVAFSLAAIGMFIGLLVYYFG  196 (491)
T ss_dssp             HHHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHcCcccccceeeehHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999997543   3578889999999999988877754    23444444444555555554444

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=98.53  E-value=9.2e-07  Score=84.74  Aligned_cols=118  Identities=7%  Similarity=-0.018  Sum_probs=71.0

Q ss_pred             hhHHHHHHhHHHHHHHHHHhhhh----cCCCCh---hhHHHHHHHHHHHHHHHHHh-cccCC-CCCCCchHHHHHHHHHH
Q 021469          159 VGGAMAVYGAFDAICSLAAGRLT----TGLPSI---TFIVSGGAIAQVVVFLWILI-NYSVT-SGVLGTLYPLIMAALLG  229 (312)
Q Consensus       159 ~g~v~~~~g~~~~ig~~~~G~l~----d~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~l~G  229 (312)
                      .+......+++.++++.+.+++.    ||.++|   ...+.++.++...++++... ....+ .+....++..+..++.|
T Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g  416 (524)
T 2xut_A          337 PAMMQALNPLLVMLLIPFNNFVLYPAIERMGVKLTALRKMGAGIAITGLSWIVVGTIQLMMDGGSALSIFWQILPYALLT  416 (524)
T ss_dssp             HHHHHTTSGGGHHHHGGGTTTC------------CCHHHHHTHHHHHHHHHHTTTTTTTTTTTTCCCCSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhHHHHHhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHH
Confidence            34444455556666666666654    443321   12344555554444332211 11011 01112345667789999


Q ss_pred             hhhhHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          230 IGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       230 ~~d~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      ++.+......+.++.+..|++ +..+.++++..+.+|..++-.+.+.+
T Consensus       417 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~~  464 (524)
T 2xut_A          417 FGEVLVSATGLEFAYSQAPKAMKGTIMSFWTLSVTVGNLWVLLANVSV  464 (524)
T ss_dssp             HHHHHHHHHHTTTHHHHCCTTCCTTTHHHHGGGHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhCcHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999854 46899999999999999988777654

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=98.41  E-value=5.6e-06  Score=75.59  Aligned_cols=113  Identities=17%  Similarity=0.158  Sum_probs=87.8

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL  235 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~  235 (312)
                      ..++|++...+.++..+++.+.|++.||++||+ .+..+.++......+..  ..++     .+..++..++.|++.+..
T Consensus        34 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~~--~~~~-----~~~l~~~~~l~g~~~~~~  105 (375)
T 2gfp_A           34 EGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRP-VILVGMSIFMLATLVAV--TTSS-----LTVLIAASAMQGMGTGVG  105 (375)
T ss_dssp             THHHHHHHHHHHHHHHHHHTTHHHHHTTSCCCC-CCHHHHHHHHHHHHHHH--HHHH-----HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch-hHHHHHHHHHHHHHHHH--Hhcc-----HHHHHHHHHHHHHHHHhh
Confidence            356889999999999999999999999999876 43455555444433222  1111     245677889999999999


Q ss_pred             hhhhHhHHHHhcc-CChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469          236 NTQLSALLGILFK-HDTEGAFAQLKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       236 ~t~~~~i~g~~~~-~~~~~afa~~~~~qs~g~ai~f~~~~~l  276 (312)
                      +.....++.+.+| +++.++++......++|..++-.+.+.+
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l  147 (375)
T 2gfp_A          106 GVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLL  147 (375)
T ss_dssp             HHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             hhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence            9999999999986 4556899999999999999998887764

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=98.24  E-value=3.7e-05  Score=73.45  Aligned_cols=134  Identities=12%  Similarity=0.022  Sum_probs=92.9

Q ss_pred             cchhhHHHHHHhHHHHHHHHHHhhhhcCC-CChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469          156 VSGVGGAMAVYGAFDAICSLAAGRLTTGL-PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGV  234 (312)
Q Consensus       156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~  234 (312)
                      ....|.+...+.++..+++.+.|++.||+ +||+ .+.++.++...+.++..  +.+.    +.+..++..++.|++.+.
T Consensus        53 ~~~~g~~~~~~~~~~~~~~~~~G~l~dr~~g~r~-~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~l~g~~~~~  125 (524)
T 2xut_A           53 GAVAKDVFHSFVIGVYFFPLLGGWIADRFFGKYN-TILWLSLIYCVGHAFLA--IFEH----SVQGFYTGLFLIALGSGG  125 (524)
T ss_dssp             TTTHHHHHHHHHHHHHHTHHHHHHHHTTSSCSHH-HHHHHHHHHHHHHHHHH--HTSS----CHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH-HHHHHHHHHHHHHHHHH--Hhcc----cHHHHHHHHHHHHHhccc
Confidence            35678999999999999999999999999 9876 44555555544443322  2221    134567778899999999


Q ss_pred             HhhhhHhHHHHhccCCh-h---hhHHHHHHHHHHHHHHHHHhhhhhh----HHHHHHHHHHHHHHHHHHH
Q 021469          235 LNTQLSALLGILFKHDT-E---GAFAQLKVWQCASIAVVFFIGPYIS----LQAMLIVMVVGICVALVGI  296 (312)
Q Consensus       235 ~~t~~~~i~g~~~~~~~-~---~afa~~~~~qs~g~ai~f~~~~~l~----~~~~~~il~~~~~~~~~~~  296 (312)
                      .......++++.+|+++ .   ..++.+....++|.+++-.+...+.    ..+.+++..++.+++.+.+
T Consensus       126 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~  195 (524)
T 2xut_A          126 IKPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKNFGAAVAFGIPGVLMFVATVFF  195 (524)
T ss_dssp             THHHHHHHHHHTCSTTTTTHHHHHHHHHHHHHHHHHHHHHHTSTHHHHTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence            99999999999997644 2   3456688888999888887766542    3333444444444444433

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=97.55  E-value=0.00073  Score=63.62  Aligned_cols=114  Identities=11%  Similarity=-0.061  Sum_probs=80.4

Q ss_pred             hhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCC--------CC-----CCchHHHHH
Q 021469          158 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTS--------GV-----LGTLYPLIM  224 (312)
Q Consensus       158 ~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-----~~~~~~~~~  224 (312)
                      ..|++...+-++.++|+++.|++.||+|||+ .+.++.++..++-+..-  +.+..        ..     .+.+..++.
T Consensus        56 ~~g~~~s~~~~G~~iG~~~~G~laDr~GRk~-~l~~~~~l~~i~~i~~a--~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  132 (491)
T 4gc0_A           56 LLGFCVASALIGCIIGGALGGYCSNRFGRRD-SLKIAAVLFFISGVGSA--WPELGFTSINPDNTVPVYLAGYVPEFVIY  132 (491)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHHHHHHHTCHHH-HHHHHHHHHHHHHHHHH--CTTTTTSCSSSSSSCCGGGGGCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHH--HHhhhhhhhcchhHHHHHHhhhHHHHHHH
Confidence            4566777788899999999999999999775 55566555544333221  11100        00     012346777


Q ss_pred             HHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhh
Q 021469          225 AALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP  274 (312)
Q Consensus       225 ~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~  274 (312)
                      -++.|++-+......+.++++..|.+. ....+........|..++.....
T Consensus       133 R~l~G~g~G~~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~  183 (491)
T 4gc0_A          133 RIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNY  183 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcch
Confidence            899999999999999999999987654 56778888888888887777654

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=97.03  E-value=0.00026  Score=65.95  Aligned_cols=73  Identities=14%  Similarity=0.110  Sum_probs=45.8

Q ss_pred             HhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhH
Q 021469          117 TLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFI  190 (312)
Q Consensus       117 ~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~  190 (312)
                      +.++||+...+....+...+..+......+. +..+.+|  ..++|.++..+.++..+++.+.|++.||+|||+.+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~lsDr~Grr~~l   76 (417)
T 2cfq_A            2 YYLKNTNFWMFGLFFFFYFFIMGAYFPFFPI-WLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYL   76 (417)
T ss_dssp             TTTSCHHHHHHHHHHHHHHHHHHHHTTTHHH-HHHTTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHH
T ss_pred             ccccccchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH
Confidence            4678888765554433332222222222211 1112223  35689999999999999999999999999987644

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	312
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	99.29
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.06
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	98.51
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	98.13

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.29  E-value=6.3e-10  Score=101.45  Aligned_cols=264  Identities=10%  Similarity=-0.018  Sum_probs=137.5

Q ss_pred             CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHH-HHhccCCcccccc---ch---
Q 021469           25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEK---ET---   97 (312)
Q Consensus        25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l-~lfL~~~~~~~~~---~~---   97 (312)
                      +++|++..|++......+.++|.++..........     .+..|.+...+.++..++ ..++++++++.+.   ++   
T Consensus       147 ~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~-----w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (447)
T d1pw4a_         147 QKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFND-----WHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKN  221 (447)
T ss_dssp             TTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCC-----STTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCSCTTTCC
T ss_pred             hhcccccccccccccchhhhhhhhhhhhHhhhhhc-----ccccchhhhhhHHHHHHHHHHhcccchhhcccchhhhhhh
Confidence            46799999999999999999998877655432211     123444444444444333 4555443322111   00   


Q ss_pred             --hh---cchhhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhccccccccccc--ccchhhHHHHHHhHHH
Q 021469           98 --AD---ASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPAL--GVSGVGGAMAVYGAFD  170 (312)
Q Consensus        98 --~~---~~~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~l--g~~~~g~v~~~~g~~~  170 (312)
                        .+   .+.+++.+.++.  ...+.++++....+....+.............+. +..+..  +....+......+++.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  298 (447)
T d1pw4a_         222 DYPDDYNEKAEQELTAKQI--FMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPT-YLKEVKHFALDKSSWAYFLYEYAG  298 (447)
T ss_dssp             C-------------CCTHH--HHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH-HBTTBSCCCHHHHHHHHHHHHHHH
T ss_pred             hcccchhhccccccchhhH--HHHHHHcCchHHHHHHHhhhhhhhhhcchhhhhh-hcccccccccchhhhhhhcchhhh
Confidence              00   000011111111  1233567777655544433333222111111111 111222  2345677888899999


Q ss_pred             HHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC
Q 021469          171 AICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD  250 (312)
Q Consensus       171 ~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~  250 (312)
                      +++.++.|++.||++|+.......................+..   +++...++.++.|++.+......+....+.+|++
T Consensus       299 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~  375 (447)
T d1pw4a_         299 IPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAG---NPTVDMICMIVIGFLIYGPVMLIGLHALELAPKK  375 (447)
T ss_dssp             HHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTTSCCTT---CHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTT
T ss_pred             hhhhhhhhhhhhhccccccccccchhHHHHHHHHHHHHhcccc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH
Confidence            9999999999999875422211111111111111111222221   1345667778889988888888888888889866


Q ss_pred             h-hhhHHHHHHHHHHHHH-HHHHhhhhh----hHHHHHHHHHHHHHHHHHHHHHh
Q 021469          251 T-EGAFAQLKVWQCASIA-VVFFIGPYI----SLQAMLIVMVVGICVALVGILFL  299 (312)
Q Consensus       251 ~-~~afa~~~~~qs~g~a-i~f~~~~~l----~~~~~~~il~~~~~~~~~~~~~~  299 (312)
                      . ..+.++.+...+++.. ++-.+.+.+    .......++.+..+++.+....+
T Consensus       376 ~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  430 (447)
T d1pw4a_         376 AAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV  430 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence            5 5788888888877543 344444332    22333444444444444444444

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.06  E-value=2.7e-09  Score=94.86  Aligned_cols=112  Identities=8%  Similarity=0.014  Sum_probs=80.0

Q ss_pred             chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469          157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN  236 (312)
Q Consensus       157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~  236 (312)
                      ...+......+++..++..+.+++.||.++|+ .+.++.++........  .+.++     ++...+..++.|++.+..+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~l~g~~~~~~~  330 (417)
T d1pv7a_         259 RVFGYVTTMGELLNASIMFFAPLIINRIGGKN-ALLLAGTIMSVRIIGS--SFATS-----ALEVVILKTLHMFEVPFLL  330 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTHHHHHHHHCHHH-HHHHHHHHHHHHHHHH--HTCCC-----HHHHHHHHHHHHHHHHHHH
T ss_pred             hhhcccccccccccccchhhhhhhhccccccc-chhhhHHHHHHhhhcc--ccccc-----cchhhHHHHHHHHHHHHHH
Confidence            34567777888899999999999999988665 4445554444433322  22222     2456778889999999999


Q ss_pred             hhhHhHHHHhccCCh-hhhHHH-HHHHHHHHHHHHHHhhhhh
Q 021469          237 TQLSALLGILFKHDT-EGAFAQ-LKVWQCASIAVVFFIGPYI  276 (312)
Q Consensus       237 t~~~~i~g~~~~~~~-~~afa~-~~~~qs~g~ai~f~~~~~l  276 (312)
                      ...+.++.+.+|++. ..++++ +.+..++|.+++-.+.+.+
T Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l  372 (417)
T d1pv7a_         331 VGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNM  372 (417)
T ss_dssp             HHHHHHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998654 567776 4566778888777666554

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=98.51  E-value=6.1e-07  Score=81.05  Aligned_cols=115  Identities=10%  Similarity=0.061  Sum_probs=86.5

Q ss_pred             ccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHh-c-ccCCCCCCCchHHHHHHHHHHhhh
Q 021469          155 GVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-N-YSVTSGVLGTLYPLIMAALLGIGD  232 (312)
Q Consensus       155 g~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~l~G~~d  232 (312)
                      ..+++|++..++.++..+++++.|++.||++||+ ++.++.++.....++... . ...+     .+..++..++.|++.
T Consensus        57 s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~-~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~  130 (447)
T d1pw4a_          57 SRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRV-FLPAGLILAAAVMLFMGFVPWATSS-----IAVMFVLLFLCGWFQ  130 (447)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHH-HHHHHHHHHHHHHHHHHHCHHHHSS-----SSHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH-HHHHHHHHHHHHHhhccccchhhhh-----HHHHHHHHHHHHHhh
Confidence            3467899999999999999999999999999775 555666555444332211 1 1111     235778889999999


Q ss_pred             hHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469          233 GVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY  275 (312)
Q Consensus       233 ~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~  275 (312)
                      +........++++.+|++ +..++++.....++|..++-.+...
T Consensus       131 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~  174 (447)
T d1pw4a_         131 GMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLL  174 (447)
T ss_dssp             HHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred             hhhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhh
Confidence            999999999999999765 4678999999999998887665543

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=98.13  E-value=5.6e-06  Score=72.65  Aligned_cols=154  Identities=14%  Similarity=0.096  Sum_probs=86.5

Q ss_pred             HhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHH
Q 021469          117 TLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGG  194 (312)
Q Consensus       117 ~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~  194 (312)
                      +.+|||+...+...++...+..+.+...++.-+ .+..|  ..++|++..++.++..+++.+.|.+.||++||+.+ .++
T Consensus         2 ~~lkn~~~~~l~~~~f~~~~~~~~~~~~l~~~l-~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l-~~~   79 (417)
T d1pv7a_           2 YYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWL-HDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYL-LWI   79 (417)
T ss_dssp             HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTHH-HHH
T ss_pred             CcccCchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH-HHH
Confidence            457888888887777777666665554443222 22223  45789999999999999999999999999987644 344


Q ss_pred             HHHHHHHHHHHHh-cccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccC---ChhhhHHHHHHHHHHHHHHHH
Q 021469          195 AIAQVVVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH---DTEGAFAQLKVWQCASIAVVF  270 (312)
Q Consensus       195 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~---~~~~afa~~~~~qs~g~ai~f  270 (312)
                      ......+...... ...+..    ....++.....+.+.+..............++   ++..+.+......+.+..++-
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (417)
T d1pv7a_          80 ITGMLVMFAPFFIFIFGPLL----QYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGA  155 (417)
T ss_dssp             HHHHHHTHHHHHHHTHHHHH----HTTCHHHHHHTTTTGGGGGTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhhhH----HHHHHHHHHHhhhcccccccchhhcccccccchhhhhHHHHHHHhhhhcccccccc
Confidence            3333333222211 110000    01123334444444433333333333332222   223456677777777777776


Q ss_pred             Hhhhhh
Q 021469          271 FIGPYI  276 (312)
Q Consensus       271 ~~~~~l  276 (312)
                      .+...+
T Consensus       156 ~~~~~l  161 (417)
T d1pv7a_         156 SIVGIM  161 (417)
T ss_dssp             HHHHHH
T ss_pred             cccccc
Confidence            666643