Citrus Sinensis ID: 021513

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-
MRFNLTWLTKLLQILVRERELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC
ccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccEEEcccccccccccccEEEEEEEEEEccEEccccccEEcccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccEEEcccccccccccccccccccccccccccccccccEEEcccccccccccEEEcccccEEEcccccccccccEEEEEccccEEEEEcc
ccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccEcccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccEEccccHHHcccccEEEEccEEEcccccccEcccccEEEEEEEEEEccEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHcccccEHHHHHHHHHHHHHccccEEcccccEEEccccccEEEEEcccccccccEcccccEEEEccEEEcccccEEEccccccEEEcccccEEEcEEEEEEEccEEEEcccc
MRFNLTWLTKLLQILVRERELQtttkfrkrpplrrgrvsprlpvpdhipkppyvsstslpdlspeyqihdsESIAKMRAACELAARVLDAAgklvrpsvttnEIDKAVHQMIIEagaypsplgyggfpksvctsvnecmchgipdsrqlqdgdiinIDVTVYLngyhgdtsktflcgnvsdGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVghgvgkvfhsepiiyhnrnenpgcmvegqtftiepiltmgsiecitwpdnwttltadgnpaaqfeHTILITRTGAEILTIC
MRFNLTWLTKLLQIlvrerelqtttkfrkrpplrrgrvsprlpvpdhipkppyvsstslpDLSPEYQIHDSESIAKMRAACELAARVLDaagklvrpsvttnEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPdsrqlqdgdIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGiavckdgasfKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC
MRFNLTWLTKLLQILVRERELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC
**FNLTWLTKLLQILVREREL*****************************************************AKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTI*
*RFNLTWLTKL***************FRKRPPLRRGRVSPRLPVPDHIPKPPYVSS*************DSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC
MRFNLTWLTKLLQILVRERELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC
**FNLTWLTKLLQILVRERELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC
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MRFNLTWLTKLLQILVRERELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query311 2.2.26 [Sep-21-2011]
Q9FV52369 Methionine aminopeptidase yes no 0.942 0.794 0.832 1e-145
Q9FV51344 Methionine aminopeptidase no no 0.942 0.851 0.733 1e-123
Q9FV50350 Methionine aminopeptidase no no 0.974 0.865 0.628 1e-107
Q6UB28335 Methionine aminopeptidase yes no 0.874 0.811 0.547 5e-80
Q54VU7404 Methionine aminopeptidase yes no 0.958 0.737 0.495 6e-80
Q9CPW9335 Methionine aminopeptidase yes no 0.874 0.811 0.551 3e-79
Q9SLN5398 Methionine aminopeptidase no no 0.887 0.693 0.503 2e-76
Q4VBS4338 Methionine aminopeptidase yes no 0.890 0.819 0.519 8e-76
P53582386 Methionine aminopeptidase no no 0.903 0.727 0.482 1e-72
A6QLA4386 Methionine aminopeptidase yes no 0.903 0.727 0.482 1e-72
>sp|Q9FV52|AMP1B_ARATH Methionine aminopeptidase 1B, chloroplastic OS=Arabidopsis thaliana GN=MAP1B PE=2 SV=2 Back     alignment and function desciption
 Score =  514 bits (1323), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 244/293 (83%), Positives = 264/293 (90%)

Query: 19  RELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMR 78
           REL+T +K R+ PPLRRGRVSPRL VPDHIP+PPYV S  LPD+S E+QI   E IAKMR
Sbjct: 77  RELETKSKVRRNPPLRRGRVSPRLLVPDHIPRPPYVESGVLPDISSEFQIPGPEGIAKMR 136

Query: 79  AACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNEC 138
           AACELAARVL+ AG LV+PSVTTNEIDKAVH MIIEAGAYPSPLGYGGFPKSVCTSVNEC
Sbjct: 137 AACELAARVLNYAGTLVKPSVTTNEIDKAVHDMIIEAGAYPSPLGYGGFPKSVCTSVNEC 196

Query: 139 MCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGI 198
           MCHGIPDSRQLQ GDIINIDVTVYL+GYHGDTS+TF CG V +G KRLVKVTEECLE+GI
Sbjct: 197 MCHGIPDSRQLQSGDIINIDVTVYLDGYHGDTSRTFFCGEVDEGFKRLVKVTEECLERGI 256

Query: 199 AVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEG 258
           AVCKDGASFKKIGKRISEHAEK+G+ VVERFVGHGVG VFHSEP+IYH RN+ PG MVEG
Sbjct: 257 AVCKDGASFKKIGKRISEHAEKFGYNVVERFVGHGVGPVFHSEPLIYHYRNDEPGLMVEG 316

Query: 259 QTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC 311
           QTFTIEPILT+G+ EC+TWPDNWTTLTADG  AAQFEHTILITRTG+EILT C
Sbjct: 317 QTFTIEPILTIGTTECVTWPDNWTTLTADGGVAAQFEHTILITRTGSEILTKC 369
Removes the N-terminal methionine from nascent proteins.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 8
>sp|Q9FV51|AMP1C_ARATH Methionine aminopeptidase 1C, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1C PE=2 SV=2 Back     alignment and function description
>sp|Q9FV50|AMP1D_ARATH Methionine aminopeptidase 1D, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1D PE=2 SV=1 Back     alignment and function description
>sp|Q6UB28|AMP1D_HUMAN Methionine aminopeptidase 1D, mitochondrial OS=Homo sapiens GN=METAP1D PE=1 SV=1 Back     alignment and function description
>sp|Q54VU7|AMP1D_DICDI Methionine aminopeptidase 1D, mitochondrial OS=Dictyostelium discoideum GN=metap1d PE=3 SV=1 Back     alignment and function description
>sp|Q9CPW9|AMP1D_MOUSE Methionine aminopeptidase 1D, mitochondrial OS=Mus musculus GN=Metap1d PE=2 SV=1 Back     alignment and function description
>sp|Q9SLN5|AMP1A_ARATH Methionine aminopeptidase 1A OS=Arabidopsis thaliana GN=MAP1A PE=2 SV=1 Back     alignment and function description
>sp|Q4VBS4|AMP1D_DANRE Methionine aminopeptidase 1D, mitochondrial OS=Danio rerio GN=metap1d PE=2 SV=1 Back     alignment and function description
>sp|P53582|AMPM1_HUMAN Methionine aminopeptidase 1 OS=Homo sapiens GN=METAP1 PE=1 SV=2 Back     alignment and function description
>sp|A6QLA4|AMPM1_BOVIN Methionine aminopeptidase 1 OS=Bos taurus GN=METAP1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query311
224099327299 predicted protein [Populus trichocarpa] 0.948 0.986 0.894 1e-156
255566855365 methionine aminopeptidase, putative [Ric 0.948 0.808 0.885 1e-154
449498639369 PREDICTED: methionine aminopeptidase 1B, 0.942 0.794 0.863 1e-150
449458896369 PREDICTED: methionine aminopeptidase 1B, 0.942 0.794 0.860 1e-150
356499713366 PREDICTED: methionine aminopeptidase 1B, 0.948 0.806 0.844 1e-147
356495984366 PREDICTED: methionine aminopeptidase 1B, 0.948 0.806 0.840 1e-147
357488339364 Methionine aminopeptidase [Medicago trun 0.942 0.804 0.853 1e-146
297844232369 hypothetical protein ARALYDRAFT_471483 [ 0.948 0.799 0.837 1e-145
225423897368 PREDICTED: methionine aminopeptidase 1B, 0.942 0.796 0.863 1e-144
147782991298 hypothetical protein VITISV_032172 [Viti 0.951 0.993 0.854 1e-144
>gi|224099327|ref|XP_002311439.1| predicted protein [Populus trichocarpa] gi|222851259|gb|EEE88806.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  556 bits (1432), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 264/295 (89%), Positives = 277/295 (93%)

Query: 17  RERELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAK 76
           RERELQ T KFRKRPPLRRGRVSPRLPVPD IPKPPY+ S  LPD+S E+QIHDSE I K
Sbjct: 5   RERELQKTVKFRKRPPLRRGRVSPRLPVPDDIPKPPYLGSNELPDISSEHQIHDSEGIVK 64

Query: 77  MRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVN 136
           MRAACELAARVLD AGKLVRPSVTTNEIDKAVHQMII+AGAYPSPLGYGGFPKSVCTSVN
Sbjct: 65  MRAACELAARVLDNAGKLVRPSVTTNEIDKAVHQMIIDAGAYPSPLGYGGFPKSVCTSVN 124

Query: 137 ECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEK 196
           ECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNV+D L RLVKVTEECLE+
Sbjct: 125 ECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVNDALMRLVKVTEECLER 184

Query: 197 GIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMV 256
           GIA+CKDGASFKKIGKRISEHAEKYG+GVVERFVGHGVG VFHSEP+I HNRN+ PG MV
Sbjct: 185 GIALCKDGASFKKIGKRISEHAEKYGYGVVERFVGHGVGTVFHSEPLILHNRNDRPGIMV 244

Query: 257 EGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC 311
           EG+TFTIEPILT+GS ECITWPDNWTTLTADG+PAAQFEHTILITRTGAEILT C
Sbjct: 245 EGETFTIEPILTIGSTECITWPDNWTTLTADGSPAAQFEHTILITRTGAEILTKC 299

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255566855|ref|XP_002524411.1| methionine aminopeptidase, putative [Ricinus communis] gi|223536372|gb|EEF38022.1| methionine aminopeptidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449498639|ref|XP_004160592.1| PREDICTED: methionine aminopeptidase 1B, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449458896|ref|XP_004147182.1| PREDICTED: methionine aminopeptidase 1B, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356499713|ref|XP_003518681.1| PREDICTED: methionine aminopeptidase 1B, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356495984|ref|XP_003516850.1| PREDICTED: methionine aminopeptidase 1B, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|357488339|ref|XP_003614457.1| Methionine aminopeptidase [Medicago truncatula] gi|355515792|gb|AES97415.1| Methionine aminopeptidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|297844232|ref|XP_002889997.1| hypothetical protein ARALYDRAFT_471483 [Arabidopsis lyrata subsp. lyrata] gi|297335839|gb|EFH66256.1| hypothetical protein ARALYDRAFT_471483 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|225423897|ref|XP_002278748.1| PREDICTED: methionine aminopeptidase 1B, chloroplastic [Vitis vinifera] gi|297737860|emb|CBI27061.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147782991|emb|CAN68565.1| hypothetical protein VITISV_032172 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query311
TAIR|locus:2205329369 MAP1C "methionine aminopeptida 0.958 0.807 0.822 2e-134
TAIR|locus:2085979344 MAP1B "methionine aminopeptida 0.942 0.851 0.736 2.5e-113
TAIR|locus:2115125350 MAP1D "methionine aminopeptida 0.909 0.808 0.657 3.9e-99
UNIPROTKB|F1P5C7320 METAP1D "Methionine aminopepti 0.874 0.85 0.544 3.9e-76
UNIPROTKB|F1MKP7331 METAP1D "Methionine aminopepti 0.874 0.821 0.547 1e-75
UNIPROTKB|Q6UB28335 METAP1D "Methionine aminopepti 0.874 0.811 0.547 1e-75
UNIPROTKB|F1PFF1451 METAP1D "Methionine aminopepti 0.874 0.603 0.544 1.7e-75
MGI|MGI:1913809335 Metap1d "methionyl aminopeptid 0.874 0.811 0.551 2.7e-75
DICTYBASE|DDB_G0280127404 map1d "methionine aminopeptida 0.958 0.737 0.498 5.7e-75
RGD|1307413334 Metap1d "methionyl aminopeptid 0.874 0.814 0.544 9.3e-75
TAIR|locus:2205329 MAP1C "methionine aminopeptidase 1B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1317 (468.7 bits), Expect = 2.0e-134, P = 2.0e-134
 Identities = 246/299 (82%), Positives = 268/299 (89%)

Query:    14 ILVRE-RELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSE 72
             I +R+ REL+T +K R+ PPLRRGRVSPRL VPDHIP+PPYV S  LPD+S E+QI   E
Sbjct:    71 IRIRKMRELETKSKVRRNPPLRRGRVSPRLLVPDHIPRPPYVESGVLPDISSEFQIPGPE 130

Query:    73 SIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVC 132
              IAKMRAACELAARVL+ AG LV+PSVTTNEIDKAVH MIIEAGAYPSPLGYGGFPKSVC
Sbjct:   131 GIAKMRAACELAARVLNYAGTLVKPSVTTNEIDKAVHDMIIEAGAYPSPLGYGGFPKSVC 190

Query:   133 TSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEE 192
             TSVNECMCHGIPDSRQLQ GDIINIDVTVYL+GYHGDTS+TF CG V +G KRLVKVTEE
Sbjct:   191 TSVNECMCHGIPDSRQLQSGDIINIDVTVYLDGYHGDTSRTFFCGEVDEGFKRLVKVTEE 250

Query:   193 CLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENP 252
             CLE+GIAVCKDGASFKKIGKRISEHAEK+G+ VVERFVGHGVG VFHSEP+IYH RN+ P
Sbjct:   251 CLERGIAVCKDGASFKKIGKRISEHAEKFGYNVVERFVGHGVGPVFHSEPLIYHYRNDEP 310

Query:   253 GCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC 311
             G MVEGQTFTIEPILT+G+ EC+TWPDNWTTLTADG  AAQFEHTILITRTG+EILT C
Sbjct:   311 GLMVEGQTFTIEPILTIGTTECVTWPDNWTTLTADGGVAAQFEHTILITRTGSEILTKC 369
GO:0004177 "aminopeptidase activity" evidence=IEA
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008235 "metalloexopeptidase activity" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA;TAS
GO:0009987 "cellular process" evidence=IEA
GO:0005739 "mitochondrion" evidence=TAS
GO:0031365 "N-terminal protein amino acid modification" evidence=TAS
GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA
TAIR|locus:2085979 MAP1B "methionine aminopeptidase 1C" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115125 MAP1D "methionine aminopeptidase 1D" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1P5C7 METAP1D "Methionine aminopeptidase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1MKP7 METAP1D "Methionine aminopeptidase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q6UB28 METAP1D "Methionine aminopeptidase 1D, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PFF1 METAP1D "Methionine aminopeptidase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:1913809 Metap1d "methionyl aminopeptidase type 1D (mitochondrial)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0280127 map1d "methionine aminopeptidase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
RGD|1307413 Metap1d "methionyl aminopeptidase type 1D (mitochondrial)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q4VBS4AMP1D_DANRE3, ., 4, ., 1, 1, ., 1, 80.51980.89060.8195yesno
Q9CPW9AMP1D_MOUSE3, ., 4, ., 1, 1, ., 1, 80.55140.87450.8119yesno
Q9Z6Q0AMPM_CHLPN3, ., 4, ., 1, 1, ., 1, 80.42590.84880.9072yesno
P0A5J2AMPM2_MYCTU3, ., 4, ., 1, 1, ., 1, 80.46090.90030.9824yesno
P0A5J3AMPM_MYCBO3, ., 4, ., 1, 1, ., 1, 80.46090.90030.9824yesno
Q9PL68AMPM_CHLMU3, ., 4, ., 1, 1, ., 1, 80.42220.84880.9072yesno
Q9FV52AMP1B_ARATH3, ., 4, ., 1, 1, ., 1, 80.83270.94210.7940yesno
Q9FV51AMP1C_ARATH3, ., 4, ., 1, 1, ., 1, 80.73310.94210.8517nono
Q6UB28AMP1D_HUMAN3, ., 4, ., 1, 1, ., 1, 80.54770.87450.8119yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.11.180.991
3rd Layer3.4.110.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query311
cd01086238 cd01086, MetAP1, Methionine Aminopeptidase 1 1e-135
PRK05716252 PRK05716, PRK05716, methionine aminopeptidase; Val 1e-122
PLN03158396 PLN03158, PLN03158, methionine aminopeptidase; Pro 1e-119
PRK12896255 PRK12896, PRK12896, methionine aminopeptidase; Rev 1e-107
COG0024255 COG0024, Map, Methionine aminopeptidase [Translati 1e-107
TIGR00500247 TIGR00500, met_pdase_I, methionine aminopeptidase, 3e-97
PRK12318291 PRK12318, PRK12318, methionine aminopeptidase; Pro 8e-86
pfam00557208 pfam00557, Peptidase_M24, Metallopeptidase family 2e-60
PRK12897248 PRK12897, PRK12897, methionine aminopeptidase; Rev 2e-54
cd01066207 cd01066, APP_MetAP, A family including aminopeptid 1e-44
PRK07281286 PRK07281, PRK07281, methionine aminopeptidase; Rev 7e-36
COG0006384 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid 3e-34
cd01092208 cd01092, APP-like, Similar to Prolidase and Aminop 1e-31
PRK08671291 PRK08671, PRK08671, methionine aminopeptidase; Pro 4e-31
TIGR00501295 TIGR00501, met_pdase_II, methionine aminopeptidase 2e-26
cd01088291 cd01088, MetAP2, Methionine Aminopeptidase 2 1e-25
cd01087243 cd01087, Prolidase, Prolidase 3e-12
cd01089228 cd01089, PA2G4-like, Related to aminopepdidase M, 9e-10
PRK10879438 PRK10879, PRK10879, proline aminopeptidase P II; P 1e-07
PRK09795361 PRK09795, PRK09795, aminopeptidase; Provisional 6e-07
TIGR00495 389 TIGR00495, crvDNA_42K, 42K curved DNA binding prot 3e-06
cd01090228 cd01090, Creatinase, Creatine amidinohydrolase 5e-06
PTZ00053470 PTZ00053, PTZ00053, methionine aminopeptidase 2; P 6e-06
PRK14575406 PRK14575, PRK14575, putative peptidase; Provisiona 2e-04
PRK15173323 PRK15173, PRK15173, peptidase; Provisional 2e-04
>gnl|CDD|238519 cd01086, MetAP1, Methionine Aminopeptidase 1 Back     alignment and domain information 
 Score =  382 bits (983), Expect = e-135
 Identities = 128/237 (54%), Positives = 163/237 (68%), Gaps = 1/237 (0%)

Query: 74  IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCT 133
           I  MR A  + A VLD   K ++P VTT E+D+  H+ I E GAYP+PLGY GFPKS+CT
Sbjct: 1   IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICT 60

Query: 134 SVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEEC 193
           SVNE +CHGIPD R L+DGDI+NIDV V L+GYHGD+++TF+ G VS+  K+LV+VTEE 
Sbjct: 61  SVNEVVCHGIPDDRVLKDGDIVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEA 120

Query: 194 LEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEP-IIYHNRNENP 252
           L KGI   K G     IG  I ++AEK G+ VV  F GHG+G+ FH EP I  + R    
Sbjct: 121 LYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVREFGGHGIGRKFHEEPQIPNYGRPGTG 180

Query: 253 GCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILT 309
             +  G  FTIEP++ +G+ E +T PD WT +T DG+ +AQFEHT+LIT  G EILT
Sbjct: 181 PKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITEDGPEILT 237

E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides. Length = 238
>gnl|CDD|235576 PRK05716, PRK05716, methionine aminopeptidase; Validated Back     alignment and domain information
>gnl|CDD|215607 PLN03158, PLN03158, methionine aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|237252 PRK12896, PRK12896, methionine aminopeptidase; Reviewed Back     alignment and domain information
>gnl|CDD|223103 COG0024, Map, Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|129591 TIGR00500, met_pdase_I, methionine aminopeptidase, type I Back     alignment and domain information
>gnl|CDD|183434 PRK12318, PRK12318, methionine aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|215993 pfam00557, Peptidase_M24, Metallopeptidase family M24 Back     alignment and domain information
>gnl|CDD|171806 PRK12897, PRK12897, methionine aminopeptidase; Reviewed Back     alignment and domain information
>gnl|CDD|238514 cd01066, APP_MetAP, A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>gnl|CDD|180918 PRK07281, PRK07281, methionine aminopeptidase; Reviewed Back     alignment and domain information
>gnl|CDD|223085 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|238525 cd01092, APP-like, Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>gnl|CDD|181534 PRK08671, PRK08671, methionine aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|129592 TIGR00501, met_pdase_II, methionine aminopeptidase, type II Back     alignment and domain information
>gnl|CDD|238521 cd01088, MetAP2, Methionine Aminopeptidase 2 Back     alignment and domain information
>gnl|CDD|238520 cd01087, Prolidase, Prolidase Back     alignment and domain information
>gnl|CDD|238522 cd01089, PA2G4-like, Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>gnl|CDD|182804 PRK10879, PRK10879, proline aminopeptidase P II; Provisional Back     alignment and domain information
>gnl|CDD|182080 PRK09795, PRK09795, aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|129586 TIGR00495, crvDNA_42K, 42K curved DNA binding protein Back     alignment and domain information
>gnl|CDD|238523 cd01090, Creatinase, Creatine amidinohydrolase Back     alignment and domain information
>gnl|CDD|240246 PTZ00053, PTZ00053, methionine aminopeptidase 2; Provisional Back     alignment and domain information
>gnl|CDD|173039 PRK14575, PRK14575, putative peptidase; Provisional Back     alignment and domain information
>gnl|CDD|185095 PRK15173, PRK15173, peptidase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 311
KOG2738369 consensus Putative methionine aminopeptidase [Post 100.0
PLN03158396 methionine aminopeptidase; Provisional 100.0
COG0024255 Map Methionine aminopeptidase [Translation, riboso 100.0
PRK12897248 methionine aminopeptidase; Reviewed 100.0
PRK07281286 methionine aminopeptidase; Reviewed 100.0
PRK12318291 methionine aminopeptidase; Provisional 100.0
PRK12896255 methionine aminopeptidase; Reviewed 100.0
TIGR00500247 met_pdase_I methionine aminopeptidase, type I. Met 100.0
PRK05716252 methionine aminopeptidase; Validated 100.0
cd01086238 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 100.0
PRK09795361 aminopeptidase; Provisional 100.0
COG0006384 PepP Xaa-Pro aminopeptidase [Amino acid transport 100.0
PRK15173323 peptidase; Provisional 100.0
PRK10879438 proline aminopeptidase P II; Provisional 100.0
PRK14575406 putative peptidase; Provisional 100.0
cd01090228 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. 100.0
TIGR02993391 ectoine_eutD ectoine utilization protein EutD. Mem 100.0
cd01087243 Prolidase Prolidase. E.C. 3.4.13.9. Also known as 100.0
PRK14576405 putative endopeptidase; Provisional 100.0
PRK13607443 proline dipeptidase; Provisional 100.0
TIGR00495389 crvDNA_42K 42K curved DNA binding protein. Protein 100.0
cd01092208 APP-like Similar to Prolidase and Aminopeptidase P 100.0
PTZ00053470 methionine aminopeptidase 2; Provisional 100.0
cd01085224 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also 100.0
PRK08671291 methionine aminopeptidase; Provisional 100.0
PF00557207 Peptidase_M24: Metallopeptidase family M24 This Pr 100.0
cd01091243 CDC68-like Related to aminopeptidase P and aminope 100.0
TIGR00501295 met_pdase_II methionine aminopeptidase, type II. M 100.0
cd01089228 PA2G4-like Related to aminopepdidase M, this famil 100.0
cd01088291 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 100.0
cd01066207 APP_MetAP A family including aminopeptidase P, ami 100.0
KOG2414488 consensus Putative Xaa-Pro aminopeptidase [Amino a 100.0
KOG2737492 consensus Putative metallopeptidase [General funct 100.0
KOG1189 960 consensus Global transcriptional regulator, cell d 99.93
KOG2775397 consensus Metallopeptidase [General function predi 99.92
KOG2413606 consensus Xaa-Pro aminopeptidase [Amino acid trans 99.91
KOG2776398 consensus Metallopeptidase [General function predi 99.84
COG5406 1001 Nucleosome binding factor SPN, SPT16 subunit [Tran 99.76
PLN03158 396 methionine aminopeptidase; Provisional 97.72
cd01086 238 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 97.71
cd01066207 APP_MetAP A family including aminopeptidase P, ami 97.51
cd01088 291 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 97.47
PRK05716 252 methionine aminopeptidase; Validated 97.32
cd01092208 APP-like Similar to Prolidase and Aminopeptidase P 97.26
PRK12896 255 methionine aminopeptidase; Reviewed 97.25
TIGR00500247 met_pdase_I methionine aminopeptidase, type I. Met 97.04
COG0024 255 Map Methionine aminopeptidase [Translation, riboso 97.02
KOG2738 369 consensus Putative methionine aminopeptidase [Post 97.0
PRK15173323 peptidase; Provisional 96.94
cd01091243 CDC68-like Related to aminopeptidase P and aminope 96.85
PRK12897248 methionine aminopeptidase; Reviewed 96.83
PRK14575406 putative peptidase; Provisional 96.8
PRK14576405 putative endopeptidase; Provisional 96.79
PRK08671291 methionine aminopeptidase; Provisional 96.78
cd01090228 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. 96.78
PF00557207 Peptidase_M24: Metallopeptidase family M24 This Pr 96.7
TIGR00495 389 crvDNA_42K 42K curved DNA binding protein. Protein 96.7
TIGR02993391 ectoine_eutD ectoine utilization protein EutD. Mem 96.67
PRK09795361 aminopeptidase; Provisional 96.65
PRK12318291 methionine aminopeptidase; Provisional 96.63
cd01087243 Prolidase Prolidase. E.C. 3.4.13.9. Also known as 96.57
PRK07281286 methionine aminopeptidase; Reviewed 96.53
TIGR00501 295 met_pdase_II methionine aminopeptidase, type II. M 96.41
cd01089 228 PA2G4-like Related to aminopepdidase M, this famil 96.26
COG0006384 PepP Xaa-Pro aminopeptidase [Amino acid transport 95.52
PTZ00053 470 methionine aminopeptidase 2; Provisional 95.49
PRK10879438 proline aminopeptidase P II; Provisional 94.63
cd01085224 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also 91.78
PRK13607443 proline dipeptidase; Provisional 90.93
KOG2776 398 consensus Metallopeptidase [General function predi 86.99
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=1.5e-86  Score=575.65  Aligned_cols=295  Identities=62%  Similarity=1.031  Sum_probs=280.9

Q ss_pred             HHHHhhccCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCC----CCCCC-CcccCCHHHHHHHHHHHHHHHHHHHH
Q 021513           16 VRERELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSL----PDLSP-EYQIHDSESIAKMRAACELAARVLDA   90 (311)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~i~~p~~~~~~~~----~~l~~-~r~vKs~~EI~~~R~A~~ia~~~l~~   90 (311)
                      +......+++.|.|+|+||||++||+++||++|++|+|++.+.+    +.... ...|+++++|+.||+||++++++++.
T Consensus        59 ~~~g~~~p~p~~~~~g~Lr~~pvsprr~VP~hI~rPdya~~g~s~se~~~~~s~~i~i~~~e~ie~mR~ac~LarevLd~  138 (369)
T KOG2738|consen   59 RKEGQYNPWPKFRFTGPLRPGPVSPRRPVPDHIPRPDYADSGVSLSEQPEISSNEIKILDPEGIEGMRKACRLAREVLDY  138 (369)
T ss_pred             hhhccCCCCccccccCCccccCCCCCCcCCccCCCCchhhcCCcccccccccccceeccCHHHHHHHHHHHHHHHHHHHH
Confidence            45556678899999999999999999999999999999987432    22222 34689999999999999999999999


Q ss_pred             HhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCCCCCCCCCCCeEEEEeeeeeCcEEeee
Q 021513           91 AGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDT  170 (311)
Q Consensus        91 ~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd~v~iD~g~~~~Gy~~D~  170 (311)
                      +...++||+|++||++++|++++++|+|||+|||.+||+++|+|+|+++|||+|+.|+||+||+|+||++++++|||+|+
T Consensus       139 Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGIPD~RpLedGDIvNiDVtvY~~GyHGDl  218 (369)
T KOG2738|consen  139 AATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGIPDSRPLEDGDIVNIDVTVYLNGYHGDL  218 (369)
T ss_pred             HhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCCCCcCcCCCCCEEeEEEEEEeccccCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCcccccccccccCcccccCCccccCCC-
Q 021513          171 SKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRN-  249 (311)
Q Consensus       171 ~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~~~~~~GHgIG~~~he~p~i~~~~~-  249 (311)
                      ++||++|+++++.++|++.+++|++.||+.+|||+++++|++.|++.+.++||++++.|||||||..||..|.|+||.+ 
T Consensus       219 neTffvG~Vde~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~~g~sVVr~ycGHGig~~FH~~PnipHya~n  298 (369)
T KOG2738|consen  219 NETFFVGNVDEKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATKNGYSVVRSYCGHGIGRVFHCAPNIPHYAKN  298 (369)
T ss_pred             ccceEeeccCHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhcCceeehhhhccccccccccCCCchhhccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999986 


Q ss_pred             CCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEcCCCeEeCCC
Q 021513          250 ENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTI  310 (311)
Q Consensus       250 ~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~~G~e~LT~  310 (311)
                      ...++|++||+||||||++.|.++...|+|+||++|+||+.++|||||+|||++|+|+||+
T Consensus       299 ~a~GvM~~G~tFTIEPmit~G~~~d~tWPD~WT~vTaDG~~sAQFEhTlLVT~tG~EILT~  359 (369)
T KOG2738|consen  299 KAPGVMKPGQTFTIEPMITIGTWEDITWPDDWTAVTADGKRSAQFEHTLLVTETGCEILTK  359 (369)
T ss_pred             CCcceeecCceEEeeeeecccccccccCCCCceEEecCCceecceeeEEEEecccceehhc
Confidence            4778999999999999999999999999999999999999999999999999999999995

>PLN03158 methionine aminopeptidase; Provisional Back     alignment and domain information
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12897 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK07281 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK12318 methionine aminopeptidase; Provisional Back     alignment and domain information
>PRK12896 methionine aminopeptidase; Reviewed Back     alignment and domain information
>TIGR00500 met_pdase_I methionine aminopeptidase, type I Back     alignment and domain information
>PRK05716 methionine aminopeptidase; Validated Back     alignment and domain information
>cd01086 MetAP1 Methionine Aminopeptidase 1 Back     alignment and domain information
>PRK09795 aminopeptidase; Provisional Back     alignment and domain information
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK15173 peptidase; Provisional Back     alignment and domain information
>PRK10879 proline aminopeptidase P II; Provisional Back     alignment and domain information
>PRK14575 putative peptidase; Provisional Back     alignment and domain information
>cd01090 Creatinase Creatine amidinohydrolase Back     alignment and domain information
>TIGR02993 ectoine_eutD ectoine utilization protein EutD Back     alignment and domain information
>cd01087 Prolidase Prolidase Back     alignment and domain information
>PRK14576 putative endopeptidase; Provisional Back     alignment and domain information
>PRK13607 proline dipeptidase; Provisional Back     alignment and domain information
>TIGR00495 crvDNA_42K 42K curved DNA binding protein Back     alignment and domain information
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>PTZ00053 methionine aminopeptidase 2; Provisional Back     alignment and domain information
>cd01085 APP X-Prolyl Aminopeptidase 2 Back     alignment and domain information
>PRK08671 methionine aminopeptidase; Provisional Back     alignment and domain information
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor Back     alignment and domain information
>TIGR00501 met_pdase_II methionine aminopeptidase, type II Back     alignment and domain information
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>cd01088 MetAP2 Methionine Aminopeptidase 2 Back     alignment and domain information
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2737 consensus Putative metallopeptidase [General function prediction only] Back     alignment and domain information
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2775 consensus Metallopeptidase [General function prediction only] Back     alignment and domain information
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2776 consensus Metallopeptidase [General function prediction only] Back     alignment and domain information
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] Back     alignment and domain information
>PLN03158 methionine aminopeptidase; Provisional Back     alignment and domain information
>cd01086 MetAP1 Methionine Aminopeptidase 1 Back     alignment and domain information
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>cd01088 MetAP2 Methionine Aminopeptidase 2 Back     alignment and domain information
>PRK05716 methionine aminopeptidase; Validated Back     alignment and domain information
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>PRK12896 methionine aminopeptidase; Reviewed Back     alignment and domain information
>TIGR00500 met_pdase_I methionine aminopeptidase, type I Back     alignment and domain information
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK15173 peptidase; Provisional Back     alignment and domain information
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor Back     alignment and domain information
>PRK12897 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK14575 putative peptidase; Provisional Back     alignment and domain information
>PRK14576 putative endopeptidase; Provisional Back     alignment and domain information
>PRK08671 methionine aminopeptidase; Provisional Back     alignment and domain information
>cd01090 Creatinase Creatine amidinohydrolase Back     alignment and domain information
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>TIGR00495 crvDNA_42K 42K curved DNA binding protein Back     alignment and domain information
>TIGR02993 ectoine_eutD ectoine utilization protein EutD Back     alignment and domain information
>PRK09795 aminopeptidase; Provisional Back     alignment and domain information
>PRK12318 methionine aminopeptidase; Provisional Back     alignment and domain information
>cd01087 Prolidase Prolidase Back     alignment and domain information
>PRK07281 methionine aminopeptidase; Reviewed Back     alignment and domain information
>TIGR00501 met_pdase_II methionine aminopeptidase, type II Back     alignment and domain information
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PTZ00053 methionine aminopeptidase 2; Provisional Back     alignment and domain information
>PRK10879 proline aminopeptidase P II; Provisional Back     alignment and domain information
>cd01085 APP X-Prolyl Aminopeptidase 2 Back     alignment and domain information
>PRK13607 proline dipeptidase; Provisional Back     alignment and domain information
>KOG2776 consensus Metallopeptidase [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query311
4fli_A326 Human Metap1 With Bengamide Analog Y16, In Mn Form 7e-74
2b3h_A329 Crystal Structure Of Human Methionine Aminopeptidas 1e-73
2g6p_A304 Crystal Structure Of Truncated (Delta 1-89) Human M 1e-73
4fuk_A337 Aminopeptidase From Trypanosoma Brucei Length = 337 4e-72
3iu7_A288 M. Tuberculosis Methionine Aminopeptidase With Mn I 1e-68
1y1n_A291 Identification Of Sh3 Motif In M. Tuberculosis Meth 2e-68
3pka_A285 M. Tuberculosis Metap With Bengamide Analog Y02, In 2e-68
3s6b_A368 Crystal Structure Of Methionine Aminopeptidase 1b F 6e-68
3ror_A291 Crystal Structure Of C105s Mutant Of Mycobacterium 1e-67
3mx6_A262 Crystal Structure Of Methionine Aminopeptidase From 2e-60
3mr1_A252 Crystal Structure Of Methionine Aminopeptidase From 2e-60
2p99_A261 E. Coli Methionine Aminopeptidase Monometalated Wit 9e-55
4mat_A278 E.Coli Methionine Aminopeptidase His79ala Mutant Le 9e-55
2gtx_A261 Structural Basis Of Catalysis By Mononuclear Methio 1e-54
4a6v_A265 X-Ray Structures Of Oxazole Hydroxamate Ecmetap-Mn 1e-54
1xnz_A264 Crystal Structure Of Mn(Ii) Form Of E. Coli. Methio 1e-54
2gg0_A263 Novel Bacterial Methionine Aminopeptidase Inhibitor 1e-54
2gu4_A263 E. Coli Methionine Aminopeptidase In Complex With N 1e-54
2p98_A262 E. Coli Methionine Aminopeptidase Monometalated Wit 1e-54
1c27_A263 E. Coli Methionine Aminopeptidase:norleucine Phosph 1e-54
3mat_A265 E.coli Methionine Aminopeptidase Transition-state I 1e-54
2mat_A264 E.Coli Methionine Aminopeptidase At 1.9 Angstrom Re 1e-54
3tav_A286 Crystal Structure Of A Methionine Aminopeptidase Fr 3e-41
1o0x_A262 Crystal Structure Of Methionine Aminopeptidase (Tm1 1e-40
3tb5_A264 Crystal Structure Of The Enterococcus Faecalis Meth 2e-37
1qxw_A252 Crystal Structure Of Staphyloccocus Aureus In Compl 2e-33
2dfi_A301 Crystal Structure Of Pf-Map(1-292)-C Length = 301 1e-21
1xgs_A295 Methionine Aminopeptidase From Hyperthermophile Pyr 1e-21
1pv9_A348 Prolidase From Pyrococcus Furiosus Length = 348 5e-13
3q6d_A356 Xaa-Pro Dipeptidase From Bacillus Anthracis. Length 5e-12
1wy2_A351 Crystal Structure Of The Prolidase From Pyrococcus 5e-12
1wn1_A356 Crystal Structure Of Dipeptiase From Pyrococcus Hor 6e-12
2zsg_A359 Crystal Structure Of X-Pro Aminopeptidase From Ther 2e-11
4ege_A378 Crystal Structure Of Dipeptidase Pepe From Mycobact 8e-10
4fkc_A377 Recombinant Prolidase From Thermococcus Sibiricus L 9e-10
1wl9_A440 Structure Of Aminopeptidase P From E. Coli Length = 1e-08
2v3z_A440 Glu383ala Escherichia Coli Aminopeptidase P In Comp 1e-08
2bwv_A440 His361ala Escherichia Coli Aminopeptidase P Length 2e-08
2bwy_A440 Glu383ala Escherichia Coli Aminopeptidase P Length 4e-08
2bww_A440 His350ala Escherichia Coli Aminopeptidase P Length 4e-08
1jaw_A440 Aminopeptidase P From E. Coli Low Ph Form Length = 4e-08
1m35_A440 Aminopeptidase P From Escherichia Coli Length = 440 4e-08
2bws_A440 His243ala Escherichia Coli Aminopeptidase P Length 2e-07
2bwt_A440 Asp260ala Escherichia Coli Aminopeptidase P Length 3e-07
2bwu_A440 Asp271ala Escherichia Coli Aminopeptidase P Length 3e-07
2bwx_A441 His354ala Escherichia Coli Aminopeptidase P Length 4e-07
2v6c_A353 Crystal Structure Of Erbb3 Binding Protein 1 (Ebp1) 2e-05
3j2i_A 394 Structure Of Late Pre-60s Ribosomal Subunits With N 5e-05
2q8k_A 401 The Crystal Structure Of Ebp1 Length = 401 6e-05
1chm_A401 Enzymatic Mechanism Of Creatine Amidinohydrolase As 1e-04
1chm_B401 Enzymatic Mechanism Of Creatine Amidinohydrolase As 1e-04
>pdb|4FLI|A Chain A, Human Metap1 With Bengamide Analog Y16, In Mn Form Length = 326 Back     alignment and structure 
Iteration: 1

 Score =  273 bits (699), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 142/294 (48%), Positives = 179/294 (60%), Gaps = 13/294 (4%)
Query: 24  TTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVS-----STSLPDLSPEYQIH--DSESIAK 76
           T K R   PL      P  PVP +I +P Y       S S   L    QI    SE I  
Sbjct: 5   TGKLRPHYPL-----MPTRPVPSYIQRPDYADHPLGMSESEQALKGTSQIKLLSSEDIEG 59
Query: 77  MRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVN 136
           MR  C LA  VLD A  +++P VTT EID AVH   I    YPSPL Y  FPKS CTSVN
Sbjct: 60  MRLVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVN 119
Query: 137 ECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEK 196
           E +CHGIPD R LQ+GDI+N+D+T+Y NGYHGD ++TF  G V DG ++LV+ T ECL +
Sbjct: 120 EVICHGIPDRRPLQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQ 179
Query: 197 GIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYH-NRNENPGCM 255
            I   K G  ++++G  I +HA+  GF VV  + GHG+ K+FH+ P + H  +N+  G M
Sbjct: 180 AIDAVKPGVRYRELGNIIQKHAQANGFSVVRSYCGHGIHKLFHTAPNVPHYAKNKAVGVM 239
Query: 256 VEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILT 309
             G  FTIEP++  G  +  TWPD WT +T DG  +AQFEHT+L+T TG EILT
Sbjct: 240 KSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGKRSAQFEHTLLVTDTGCEILT 293
>pdb|2B3H|A Chain A, Crystal Structure Of Human Methionine Aminopeptidase Type I With A Third Cobalt In The Active Site Length = 329 Back     alignment and structure
>pdb|2G6P|A Chain A, Crystal Structure Of Truncated (Delta 1-89) Human Methionine Aminopeptidase Type 1 In Complex With Pyridyl Pyrimidine Derivative Length = 304 Back     alignment and structure
>pdb|4FUK|A Chain A, Aminopeptidase From Trypanosoma Brucei Length = 337 Back     alignment and structure
>pdb|3IU7|A Chain A, M. Tuberculosis Methionine Aminopeptidase With Mn Inhibitor A02 Length = 288 Back     alignment and structure
>pdb|1Y1N|A Chain A, Identification Of Sh3 Motif In M. Tuberculosis Methionine Aminopeptidase Suggests A Mode Of Interaction With The Ribosome Length = 291 Back     alignment and structure
>pdb|3PKA|A Chain A, M. Tuberculosis Metap With Bengamide Analog Y02, In Mn Form Length = 285 Back     alignment and structure
>pdb|3S6B|A Chain A, Crystal Structure Of Methionine Aminopeptidase 1b From Plasmodium Falciparum, Pf10_0150 Length = 368 Back     alignment and structure
>pdb|3ROR|A Chain A, Crystal Structure Of C105s Mutant Of Mycobacterium Tuberculosis Methionine Aminopeptidase Length = 291 Back     alignment and structure
>pdb|3MX6|A Chain A, Crystal Structure Of Methionine Aminopeptidase From Ricketts Prowazekii Bound To Methionine Length = 262 Back     alignment and structure
>pdb|3MR1|A Chain A, Crystal Structure Of Methionine Aminopeptidase From Ricketts Prowazekii Length = 252 Back     alignment and structure
>pdb|2P99|A Chain A, E. Coli Methionine Aminopeptidase Monometalated With Inhibitor Ye6 Length = 261 Back     alignment and structure
>pdb|4MAT|A Chain A, E.Coli Methionine Aminopeptidase His79ala Mutant Length = 278 Back     alignment and structure
>pdb|2GTX|A Chain A, Structural Basis Of Catalysis By Mononuclear Methionine Aminopeptidase Length = 261 Back     alignment and structure
>pdb|4A6V|A Chain A, X-Ray Structures Of Oxazole Hydroxamate Ecmetap-Mn Complexes Length = 265 Back     alignment and structure
>pdb|1XNZ|A Chain A, Crystal Structure Of Mn(Ii) Form Of E. Coli. Methionine Aminopeptidase In Complex With 5-(2-Chlorophenyl)furan-2- Carboxylic Acid Length = 264 Back     alignment and structure
>pdb|2GG0|A Chain A, Novel Bacterial Methionine Aminopeptidase Inhibitors Length = 263 Back     alignment and structure
>pdb|2GU4|A Chain A, E. Coli Methionine Aminopeptidase In Complex With Nlep, 1: 0.5, Di-Metalated Length = 263 Back     alignment and structure
>pdb|2P98|A Chain A, E. Coli Methionine Aminopeptidase Monometalated With Inhibitor Ye7 Length = 262 Back     alignment and structure
>pdb|1C27|A Chain A, E. Coli Methionine Aminopeptidase:norleucine Phosphonate Complex Length = 263 Back     alignment and structure
>pdb|3MAT|A Chain A, E.coli Methionine Aminopeptidase Transition-state Inhibitor Complex Length = 265 Back     alignment and structure
>pdb|2MAT|A Chain A, E.Coli Methionine Aminopeptidase At 1.9 Angstrom Resolution Length = 264 Back     alignment and structure
>pdb|3TAV|A Chain A, Crystal Structure Of A Methionine Aminopeptidase From Mycobacterium Abscessus Length = 286 Back     alignment and structure
>pdb|1O0X|A Chain A, Crystal Structure Of Methionine Aminopeptidase (Tm1478) From Thermotoga Maritima At 1.90 A Resolution Length = 262 Back     alignment and structure
>pdb|3TB5|A Chain A, Crystal Structure Of The Enterococcus Faecalis Methionine Aminopeptidase Apo Form Length = 264 Back     alignment and structure
>pdb|1QXW|A Chain A, Crystal Structure Of Staphyloccocus Aureus In Complex With An Aminoketone Inhibitor 54135. Length = 252 Back     alignment and structure
>pdb|2DFI|A Chain A, Crystal Structure Of Pf-Map(1-292)-C Length = 301 Back     alignment and structure
>pdb|1XGS|A Chain A, Methionine Aminopeptidase From Hyperthermophile Pyrococcus Furiosus Length = 295 Back     alignment and structure
>pdb|1PV9|A Chain A, Prolidase From Pyrococcus Furiosus Length = 348 Back     alignment and structure
>pdb|3Q6D|A Chain A, Xaa-Pro Dipeptidase From Bacillus Anthracis. Length = 356 Back     alignment and structure
>pdb|1WY2|A Chain A, Crystal Structure Of The Prolidase From Pyrococcus Horikoshii Ot3 Length = 351 Back     alignment and structure
>pdb|1WN1|A Chain A, Crystal Structure Of Dipeptiase From Pyrococcus Horikoshii Ot3 Length = 356 Back     alignment and structure
>pdb|2ZSG|A Chain A, Crystal Structure Of X-Pro Aminopeptidase From Thermotoga Maritima Msb8 Length = 359 Back     alignment and structure
>pdb|4EGE|A Chain A, Crystal Structure Of Dipeptidase Pepe From Mycobacterium Ulcerans Length = 378 Back     alignment and structure
>pdb|4FKC|A Chain A, Recombinant Prolidase From Thermococcus Sibiricus Length = 377 Back     alignment and structure
>pdb|1WL9|A Chain A, Structure Of Aminopeptidase P From E. Coli Length = 440 Back     alignment and structure
>pdb|2V3Z|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P In Complex With Substrate Length = 440 Back     alignment and structure
>pdb|2BWV|A Chain A, His361ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWY|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWW|A Chain A, His350ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|1JAW|A Chain A, Aminopeptidase P From E. Coli Low Ph Form Length = 440 Back     alignment and structure
>pdb|1M35|A Chain A, Aminopeptidase P From Escherichia Coli Length = 440 Back     alignment and structure
>pdb|2BWS|A Chain A, His243ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWT|A Chain A, Asp260ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWU|A Chain A, Asp271ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2V6C|A Chain A, Crystal Structure Of Erbb3 Binding Protein 1 (Ebp1) Length = 353 Back     alignment and structure
>pdb|3J2I|A Chain A, Structure Of Late Pre-60s Ribosomal Subunits With Nuclear Export Factor Arx1 Bound At The Peptide Exit Tunnel Length = 394 Back     alignment and structure
>pdb|2Q8K|A Chain A, The Crystal Structure Of Ebp1 Length = 401 Back     alignment and structure
>pdb|1CHM|A Chain A, Enzymatic Mechanism Of Creatine Amidinohydrolase As Deduced From Crystal Structures Length = 401 Back     alignment and structure
>pdb|1CHM|B Chain B, Enzymatic Mechanism Of Creatine Amidinohydrolase As Deduced From Crystal Structures Length = 401 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query311
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 1e-171
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 1e-169
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 1e-164
3mx6_A262 Methionine aminopeptidase; seattle structural geno 1e-133
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 1e-129
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 1e-125
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 1e-119
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 1e-119
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 1e-115
2q8k_A 401 Proliferation-associated protein 2G4; EBP1, PA2G4, 6e-68
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 1e-67
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 5e-04
2nw5_A360 Methionine aminopeptidase 2; metap2, structural ge 8e-53
1b6a_A478 Methionine aminopeptidase; angiogenesis inhibitor; 1e-51
1b6a_A478 Methionine aminopeptidase; angiogenesis inhibitor; 7e-04
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 3e-33
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 4e-33
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 6e-33
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 1e-32
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 2e-32
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 4e-32
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 4e-30
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 4e-26
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 3e-23
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 2e-20
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 4e-13
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 9e-13
2iw2_A494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 8e-11
3l24_A517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 4e-10
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 1e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A Length = 285 Back     alignment and structure
 Score =  475 bits (1224), Expect = e-171
 Identities = 129/282 (45%), Positives = 172/282 (60%), Gaps = 2/282 (0%)

Query: 29  KRPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVL 88
            R  L  G +SP  PVP+ I +P YV          E  +   E I KMR A  +AA  L
Sbjct: 3   SRTALSPGVLSPTRPVPNWIARPEYVG-KPAAQEGSEPWVQTPEVIEKMRVAGRIAAGAL 61

Query: 89  DAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQ 148
             AGK V P VTT+E+D+  H+ +++ GAYPS LGY GFPKS CTS+NE +CHGIPDS  
Sbjct: 62  AEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTV 121

Query: 149 LQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFK 208
           + DGDI+NIDVT Y+ G HGDT+ TF  G+V+D  + LV  T E   + I   K G +  
Sbjct: 122 ITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALS 181

Query: 209 KIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYH-NRNENPGCMVEGQTFTIEPIL 267
            IG+ I  +A ++G+ VV  F GHG+G  FH+  ++ H ++      M  G TFTIEP++
Sbjct: 182 VIGRVIESYANRFGYNVVRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMI 241

Query: 268 TMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILT 309
            +G+++   W D WT +T D    AQFEHT+L+T TG EILT
Sbjct: 242 NLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVTDTGVEILT 283
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Length = 368 Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Length = 329 Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Length = 262 Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Length = 263 Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Length = 252 Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Length = 264 Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Length = 262 Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Length = 286 Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Length = 401 Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Length = 295 Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Length = 295 Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Length = 478 Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Length = 478 Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Length = 401 Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Length = 351 Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Length = 356 Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Length = 356 Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Length = 402 Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Length = 359 Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Length = 378 Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Length = 444 Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Length = 470 Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Length = 467 Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Length = 427 Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Length = 440 Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Length = 494 Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Length = 517 Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Length = 451 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query311
4fuk_A337 Methionine aminopeptidase; structural genomics con 100.0
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 100.0
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 100.0
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 100.0
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 100.0
3mx6_A262 Methionine aminopeptidase; seattle structural geno 100.0
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 100.0
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 100.0
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 100.0
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 100.0
2q8k_A401 Proliferation-associated protein 2G4; EBP1, PA2G4, 100.0
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 100.0
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 100.0
3fm3_A358 Methionine aminopeptidase 2; metap2, structural ge 100.0
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 100.0
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 100.0
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 100.0
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 100.0
4fkc_A377 XAA-Pro aminopeptidase; PITA-bread structure, prol 100.0
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 100.0
1b6a_A478 Methionine aminopeptidase; angiogenesis inhibitor; 100.0
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 100.0
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 100.0
3l24_A517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 100.0
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 100.0
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 100.0
2nw5_A360 Methionine aminopeptidase 2; metap2, structural ge 100.0
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 100.0
2iw2_A494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 100.0
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 100.0
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 100.0
3ctz_A623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 100.0
4b6a_t 614 Probable metalloprotease ARX1; large ribosomal sub 99.93
3fm3_A 358 Methionine aminopeptidase 2; metap2, structural ge 97.28
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 96.73
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 96.58
2nw5_A 360 Methionine aminopeptidase 2; metap2, structural ge 96.54
4fuk_A 337 Methionine aminopeptidase; structural genomics con 96.53
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 96.51
3tb5_A 264 Methionine aminopeptidase; hydrolase, metalloprote 96.5
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 96.47
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 96.44
3tav_A 286 Methionine aminopeptidase; ssgcid, seattle structu 96.43
3mx6_A 262 Methionine aminopeptidase; seattle structural geno 96.41
1xgs_A 295 Methionine aminopeptidase; hyperthermophIle; 1.75A 96.4
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 96.38
2b3h_A 329 Methionine aminopeptidase 1; hydrolase, metallopro 96.3
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 96.2
2gg2_A 263 Methionine aminopeptidase; PITA-bread fold, MAP in 96.19
3pka_A 285 Methionine aminopeptidase; hydrolase-hydrolase inh 96.18
3s6b_A 368 Methionine aminopeptidase; malaria, proteolysis, " 96.1
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 96.08
2q8k_A 401 Proliferation-associated protein 2G4; EBP1, PA2G4, 95.85
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 95.81
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 95.72
4fkc_A377 XAA-Pro aminopeptidase; PITA-bread structure, prol 95.61
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 95.54
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 95.04
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 95.0
1b6a_A 478 Methionine aminopeptidase; angiogenesis inhibitor; 94.58
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 93.33
4b6a_t 614 Probable metalloprotease ARX1; large ribosomal sub 92.12
3ctz_A623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 91.91
3l24_A517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 91.82
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 91.63
2iw2_A 494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 88.32
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} Back     alignment and structure
Probab=100.00  E-value=1.9e-74  Score=535.23  Aligned_cols=289  Identities=45%  Similarity=0.823  Sum_probs=270.4

Q ss_pred             cCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCC----------------CCCCCCCCcccCCHHHHHHHHHHHHHHHH
Q 021513           23 TTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSST----------------SLPDLSPEYQIHDSESIAKMRAACELAAR   86 (311)
Q Consensus        23 ~~~~~~~~~~~~~~~~s~~~~~~~~i~~p~~~~~~----------------~~~~l~~~r~vKs~~EI~~~R~A~~ia~~   86 (311)
                      .+++|+|+|+||||++||++.||++|++|+|+...                ........|.|||++||++||+||+++++
T Consensus         2 ~~~~~~~~g~~~p~~~sp~~~vP~~i~~p~y~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~VKs~~EI~~mR~A~~i~~~   81 (337)
T 4fuk_A            2 AMKTFDFTGPLRPGKITPRRAVPSHILRPDYADRAGGVSASEEKDRGSKVKVYNIQFLHDDSKKTAEIQRIKTVCQLSRE   81 (337)
T ss_dssp             CEECCCCCSSCCCCCCCCCCCCCTTSCCCTTSSSTTCCCHHHHHHTTCCCCCCCCTTTTCTTC--CHHHHHHHHHHHHHH
T ss_pred             CccCcceecccccccCCCCCCCCCCCCCCCcccCCCCCCccccccccCccccccchhhcccCCCHHHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999998532                12233456899999999999999999999


Q ss_pred             HHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCCCCCCCCCCCeEEEEeeeeeCcE
Q 021513           87 VLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGY  166 (311)
Q Consensus        87 ~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p~~~~l~~Gd~v~iD~g~~~~Gy  166 (311)
                      +++.+++.++||+||.||++.+++++.++|+++++.+|.+||+++|+|.|++++|+.|++++|++||+|++|+|+.++||
T Consensus        82 a~~~~~~~ikpG~te~el~~~~~~~~~~~g~~~~~~~~~~fp~iv~~g~n~~~~H~~~~~~~l~~GD~v~iD~g~~~~GY  161 (337)
T 4fuk_A           82 VLDIATAAAKPGITTDELDRIVHEATVERNMYPSPLNYYGFPKSVCTSVNEVICHGIPDSRELEEGDILNIDVSSYLNGF  161 (337)
T ss_dssp             HHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTE
T ss_pred             HHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCccCCCCCCcCceeeccccccccCCCCCCccccCCCEEEEecceeECCE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCCcccccccccccCcccccCCcccc
Q 021513          167 HGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYH  246 (311)
Q Consensus       167 ~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~~~~~~~~GHgIG~~~he~p~i~~  246 (311)
                      ++|++|||++|++++++++++++++++++++++++|||++++||++++++++++.||..+++++|||||+.+|+.|.+.+
T Consensus       162 ~sD~tRT~~vG~~~~~~~~l~~~v~ea~~~ai~~~kpG~~~~di~~~~~~~~~~~g~~~~~~~~GHGIG~~~he~p~~~~  241 (337)
T 4fuk_A          162 HGDLNETVFIGRPDDDSVRLVHAAYECLCAGIGVVKPEALYKQVGDAIEACASQYQCSVVRTYTGHGVGHLFHTSPTVCH  241 (337)
T ss_dssp             EEEEEEEEESSSCCHHHHHHHHHHHHHHHHHHTTCSTTCBTTHHHHHHHHHHHTTTCEECSSEEEEECSSSSSEEEEECC
T ss_pred             EEeeeeeEEeCCccHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhcCCcccCcccCCCCCccccCCcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             CCC-CCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEcCCCeEeCCCC
Q 021513          247 NRN-ENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC  311 (311)
Q Consensus       247 ~~~-~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~~G~e~LT~~  311 (311)
                      +.+ ++..+|+|||||||||++|.+......|+|+||++|+||.+|+|||||||||++|+|+||.|
T Consensus       242 ~~~~~~~~~L~~GMV~TIEPgiy~~~~~~~~~~D~wt~~t~dg~~gvriEd~VlVTe~G~EvLT~~  307 (337)
T 4fuk_A          242 YANNKSLGMMRPGHVFTIEPMINLGTWQDVTWPDKWTSTTKDGRRSAQFEHTMVVTNGGVEIFTDW  307 (337)
T ss_dssp             SCC---CCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEEECSSSEEESSCC
T ss_pred             cccCCCCCEeCCCCEEEECCeeEcCCCcceEcCCCCeEEecCCceEEEeccEEEEcCCcCEECCCC
Confidence            643 45568999999999999999999999999999999999999999999999999999999975
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Back     alignment and structure
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Back     alignment and structure
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Back     alignment and structure
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Back     alignment and structure
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae} Back     alignment and structure
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Back     alignment and structure
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A Back     alignment and structure
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Back     alignment and structure
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Back     alignment and structure
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae} Back     alignment and structure
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 311
d2gg2a1262 d.127.1.1 (A:3-264) Methionine aminopeptidase {Esc 1e-64
d1o0xa_249 d.127.1.1 (A:) Methionine aminopeptidase {Thermoto 1e-52
d1b6aa2295 d.127.1.1 (A:110-374,A:449-478) Methionine aminope 7e-45
d1qxya_249 d.127.1.1 (A:) Methionine aminopeptidase {Staphylo 4e-40
d2v3za2264 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal 1e-35
d1xgsa2218 d.127.1.1 (A:1-194,A:272-295) Methionine aminopept 1e-32
d1pv9a2221 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal 3e-31
d1chma2246 d.127.1.1 (A:157-402) Creatinase, catalytic (C-ter 2e-30
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Length = 262 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Methionine aminopeptidase
species: Escherichia coli [TaxId: 562]

 Score =  202 bits (514), Expect = 1e-64
 Identities = 110/246 (44%), Positives = 154/246 (62%), Gaps = 3/246 (1%)

Query: 67  QIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMII-EAGAYPSPLGYG 125
            I   E I KMR A  LAA VL+     V+P V+T E+D+  +  I+ E  A  + LGY 
Sbjct: 2   SIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYH 61

Query: 126 GFPKSVCTSVNECMCHGIP-DSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLK 184
           G+PKSVC S+NE +CHGIP D++ L+DGDI+NIDVTV  +G+HGDTSK F+ G  +   +
Sbjct: 62  GYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGE 121

Query: 185 RLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPII 244
           RL ++T+E L   + + K G + ++IG  I +  E  GF VV  + GHG+G+ FH EP +
Sbjct: 122 RLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQV 181

Query: 245 YHNRNENPGCMVE-GQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRT 303
            H  +     +++ G TFTIEP++  G  E  T  D WT  T D + +AQ+EHTI++T  
Sbjct: 182 LHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDN 241

Query: 304 GAEILT 309
           G EILT
Sbjct: 242 GCEILT 247
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Length = 249 Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Length = 249 Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 264 Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 218 Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 221 Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Length = 246 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query311
d1o0xa_249 Methionine aminopeptidase {Thermotoga maritima [Ta 100.0
d1qxya_249 Methionine aminopeptidase {Staphylococcus aureus [ 100.0
d2gg2a1262 Methionine aminopeptidase {Escherichia coli [TaxId 100.0
d1pv9a2221 Aminopeptidase P, C-terminal domain {Archaeon Pyro 100.0
d1chma2246 Creatinase, catalytic (C-terminal) domain {Pseudom 100.0
d1xgsa2218 Methionine aminopeptidase {Archaeon Pyrococcus fur 100.0
d1b6aa2295 Methionine aminopeptidase {Human (Homo sapiens) [T 100.0
d2v3za2264 Aminopeptidase P, C-terminal domain {Escherichia c 100.0
d1pv9a2221 Aminopeptidase P, C-terminal domain {Archaeon Pyro 97.13
d1xgsa2 218 Methionine aminopeptidase {Archaeon Pyrococcus fur 97.08
d2gg2a1 262 Methionine aminopeptidase {Escherichia coli [TaxId 96.6
d1chma2246 Creatinase, catalytic (C-terminal) domain {Pseudom 96.58
d1b6aa2 295 Methionine aminopeptidase {Human (Homo sapiens) [T 96.33
d2v3za2 264 Aminopeptidase P, C-terminal domain {Escherichia c 96.06
d1qxya_ 249 Methionine aminopeptidase {Staphylococcus aureus [ 95.84
d1o0xa_ 249 Methionine aminopeptidase {Thermotoga maritima [Ta 95.49
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Methionine aminopeptidase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.4e-57  Score=399.49  Aligned_cols=246  Identities=36%  Similarity=0.618  Sum_probs=231.7

Q ss_pred             CcccCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCccCCCCCCCCCCeeeecCCCccccCCC
Q 021513           65 EYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIP  144 (311)
Q Consensus        65 ~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pG~te~ei~~~~~~~~~~~G~~p~~~~~~~~~~~v~~g~n~~~~h~~p  144 (311)
                      +|.||||+||++||+|+++++++++++.+.++||+||.||++.+.+.+.+.|+.+.+.++.+++..++.+.++..+|+.+
T Consensus         1 m~~IKs~~Ei~~mr~A~~ia~~~~~~~~~~i~~G~te~ev~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (249)
T d1o0xa_           1 MIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATCVSVNEEVVHGLP   80 (249)
T ss_dssp             CCCCCCHHHHHHHHHHHHHHHHHHHHGGGGCSTTCBHHHHHHHHHHHHHHHTCEESSTTGGGCCCSEEEEETTBCSCCCC
T ss_pred             CCccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHhhhhhhccccccccccccccCcccccceee
Confidence            58999999999999999999999999999999999999999999999999999988877777888888888988888765


Q ss_pred             -CCCCCCCCCeEEEEeeeeeCcEEeeeeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHcCC
Q 021513          145 -DSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGF  223 (311)
Q Consensus       145 -~~~~l~~Gd~v~iD~g~~~~Gy~~D~~RT~~vG~~~~~~~~l~~~~~~~~~~~i~~~kpG~~~~ei~~~i~~~~~~~G~  223 (311)
                       +++.+++||+|.+|+++.++||++|++||+++|++++++++++++++++++++++.+|||++++||++++++++++.||
T Consensus        81 ~~~~~~~~gd~v~id~g~~~~gy~~D~~RT~~~G~~s~~~~~~~~~~~~a~~a~i~~~kpG~~~~dv~~~~~~~~~~~g~  160 (249)
T d1o0xa_          81 LKEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESVGF  160 (249)
T ss_dssp             CTTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHHHHHHHTTC
T ss_pred             ccccccccccceeeecceeecceecccccceeecCcChhhHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhcCC
Confidence             5788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccCcccccCCccccCC-CCCCccccCCcEEEEcceeecCCCcceecCCCCeeeecCCCceEEEeEEEEEcC
Q 021513          224 GVVERFVGHGVGKVFHSEPIIYHNR-NENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITR  302 (311)
Q Consensus       224 ~~~~~~~GHgIG~~~he~p~i~~~~-~~~~~~l~~GmvftiEp~i~~~~~~~~~~~d~w~~~t~~g~~~~~~EdtvlVt~  302 (311)
                      ..+++++|||||+.+|+.|.+.... .+++.+|+|||||+|||++|.+......|+|+|++++.+|.+++|+||+|+||+
T Consensus       161 ~~~~~~~GHgiG~~~~~~p~~~~~~~~~~~~~le~gMv~~iEp~~~~~~~~~~~~e~~~~~~~~~g~~g~r~Ed~v~VTe  240 (249)
T d1o0xa_         161 NVIRDYVGHGVGRELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMVSEGDWRVVVKEDGWTAVTVDGSRCAHFEHTILITE  240 (249)
T ss_dssp             EECCSSCEEECSSSSSEEEEECSCCCTTCSCBCCTTCEEEECCEEESSCCCEEECTTSSCEEETTCCCEEECBEEEEECS
T ss_pred             eeecCCcccccccCCCcCCccceeccCCCCccccCCeEEEecceeecCCCceEEccCCcEEEeeCCcceEEeceEEEEcC
Confidence            9888999999999999998765432 246679999999999999999999999999999999999999999999999999


Q ss_pred             CCeEeCCC
Q 021513          303 TGAEILTI  310 (311)
Q Consensus       303 ~G~e~LT~  310 (311)
                      +|+|+||+
T Consensus       241 ~G~e~LTk  248 (249)
T d1o0xa_         241 NGAEILTK  248 (249)
T ss_dssp             SSEEESSC
T ss_pred             CcCeeCCC
Confidence            99999997
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure