Citrus Sinensis ID: 021515

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-
Protein Sequence
MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQTQYQESTSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSPPPPPPPPPQKEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNSTVVTKSDHVPSSINFSASATNSFISSLTGTAGDTDSIQPSFSSGFQFTTPSSAGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRCASVN
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHccccccccccccccccHHHHHHHHHHHcccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHEEEEEEEccccccccccccccccHHHcccccccccccccccccc
Coil and Loop (DISEMBL)
MAVELmmgygcgdSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSrsgqvpseqqtqyqestsssptnlepdkEIKVAAEVAVNNFKKVISllgrprtgharfrrapvgspppppppppqkeekvhlqepagpsvqstnhlSKEQVSAfkvycptpvhrlpplphqvhksnpnstvvtksdhvpssinfsasatnsfissltgtagdtdsiqpsfssgfqfttpssagkpplsssslkrkcnsmddaalkcgsssgrchcskkrksrikrvtrvpaisskmadippddyswrkygqkpikgsphprcasvn
Flexible Loop (DISEMBL)
MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQtqyqestsssptnlepDKEIKVAAEVAVNNFKKVISLLGRPRTGHARfrrapvgsppppppPPPQKEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNSTVVTKSDHVPSSINFSASATNSFISSLTGTAGDTDSIQPSFSSGFQFTTPSSAGKPPLSSSSLKRKCNSMDDAalkcgsssgrchcskkrksrikrvtrvpaisskmadippddyswrkygqkpikgsphprcasvn
Low Complexity Region (SEG)
MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPseqqtqyqestsssPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSpppppppppQKEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNSTVVTKSDHVPSSINFSASATNSFISSLTGTAGDTDSIQPSFSSGFQFTTpssagkpplsssslkRKCNSMDDAALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRCASVN
Disordered region (IsUnstruct)
*****MMGYGCGDSFAAA*********************************************************KVAAEVAVNNFKKVISLLG*****************************************************AFKVYCPTPV**********************************************************************************************************************************************************
Disordered Region (DISOPRED)
MAVEL**GYGC************NAVQEAASEGMQSIGEFI******************************************NNF****************************************************************************************************************************************************************************************************DIPPDDYSWRKYGQKPIKGSPHPR*****
Disordered Region (DISEMBL)
MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSR************************PDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRA*********************************HLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNSTVVTKSDHVPSSINFSASATNSFISSLTGTAGDTDSIQPSFSSGFQF******************KCNSMDDAALKC******************RVTRVPAISSKMADIPPDDYSWRKYGQK**************
Disordered Region (DISPRO)
******M**GCG**FAAAVKMEENAVQEAASEGMQSIGEFIKLL*R**************************KEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAP*********************************************CPTPVH***************************************************************************************************CHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGS*********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQTQYQESTSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSPPPPPPPPPQKEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNSTVVTKSDHVPSSINFSASATNSFISSLTGTAGDTDSIQPSFSSGFQFTTPSSAGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRCASVN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	311	2.2.26 [Sep-21-2011]
Q9STX0	353	Probable WRKY transcripti	yes	no	0.884	0.779	0.479	3e-66
O22176	317	Probable WRKY transcripti	no	no	0.826	0.810	0.398	1e-42
Q9SV15	325	Probable WRKY transcripti	no	no	0.813	0.778	0.376	1e-35
O04336	380	Probable WRKY transcripti	no	no	0.353	0.289	0.588	1e-27
Q9SR07	330	Probable WRKY transcripti	no	no	0.421	0.396	0.5	2e-25
Q9SJA8	321	Probable WRKY transcripti	no	no	0.263	0.255	0.593	2e-24
Q93WU6	330	Probable WRKY transcripti	no	no	0.353	0.333	0.516	1e-23
Q32SG4	397	Protein WRKY1 OS=Zea mays	N/A	no	0.292	0.229	0.541	1e-22
O64747	427	Probable WRKY transcripti	no	no	0.173	0.126	0.508	9e-07
Q9SA80	430	Probable WRKY transcripti	no	no	0.144	0.104	0.52	6e-06

>sp|Q9STX0|WRKY7_ARATH Probable WRKY transcription factor 7 OS=Arabidopsis thaliana GN=WRKY7 PE=1 SV=1

 Score =  252 bits (643), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 165/344 (47%), Positives = 203/344 (59%), Gaps = 69/344 (20%)

Query: 1   MAVELMMG-YGCGD-------SFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPS 52
           M VELMM  Y  G        + AAA KME+ A++EAAS G+  + EF+KL+ +S Q   
Sbjct: 1   MTVELMMSSYSGGGGGGDGFPAIAAAAKMEDTALREAASAGIHGVEEFLKLIGQSQQPTE 60

Query: 53  EQQTQYQESTSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSPP 112
           + QT                 EI    +VAVN+FKKVISLLGR RTGHARFRRAP  +  
Sbjct: 61  KSQT-----------------EITAVTDVAVNSFKKVISLLGRSRTGHARFRRAPASTQT 103

Query: 113 PPPPPPPQKEEKVHLQEPAGPSVQSTNHLSKEQV-------SAFKVYCPTPVHRLPPLPH 165
           P      Q        E      ++++ L+K++        SAF+VYCPTP+HR PPL H
Sbjct: 104 PFK----QTPVVEEEVEVEEKKPETSSVLTKQKTEQYHGGGSAFRVYCPTPIHRRPPLSH 159

Query: 166 Q-------VHKSNPNSTVVTKSDHVPSSINFS----ASATNSFISSLTGTAGDTDSIQPS 214
                       + +S+    ++  PS+INF+     SATNSF+SS      DTDS    
Sbjct: 160 NNNNNQNQTKNGSSSSSPPMLANGAPSTINFAPSPPVSATNSFMSS---HRCDTDSTH-- 214

Query: 215 FSSGFQFTTPS----SAGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCSKKRKSRIKR 270
            SSGF+FT PS    S GKPPLSS+SLKR+CNS         S S RCHCSKKRKSR+KR
Sbjct: 215 MSSGFEFTNPSQLSGSRGKPPLSSASLKRRCNS---------SPSSRCHCSKKRKSRVKR 265

Query: 271 VTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPR----CASV 310
           V RVPA+SSKMADIP D++SWRKYGQKPIKGSPHPR    C+SV
Sbjct: 266 VIRVPAVSSKMADIPSDEFSWRKYGQKPIKGSPHPRGYYKCSSV 309

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.
Arabidopsis thaliana (taxid: 3702)

>sp|O22176|WRK15_ARATH Probable WRKY transcription factor 15 OS=Arabidopsis thaliana GN=WRKY15 PE=2 SV=1

 Score =  173 bits (439), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/321 (39%), Positives = 171/321 (53%), Gaps = 64/321 (19%)

Query: 1   MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQTQYQE 60
           MAVELM       ++ + V  +  AVQEAA+ G++SI  FI L+SR      +  +    
Sbjct: 1   MAVELMT-----RNYISGVGADSFAVQEAAASGLKSIENFIGLMSRDSFNSDQPSSSSAS 55

Query: 61  STSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSPPPPPPPPPQ 120
           +++S+  +LE  +     A+ AV+ FK+VISLL R RTGHARFRRAPV    P       
Sbjct: 56  ASASAAADLESARN--TTADAAVSKFKRVISLLDRTRTGHARFRRAPVHVISP------- 106

Query: 121 KEEKVHLQE-PAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNSTVVTK 179
               V LQE P     QS      + +                      K + +S++ T 
Sbjct: 107 ----VLLQEEPKTTPFQSPLPPPPQMI---------------------RKGSFSSSMKT- 140

Query: 180 SDHVPSSINFSASATNSFISSLTGTAGDTDSI----QPSFSSGFQFTTPSSAGKPPLSSS 235
                  I+FS+      +SS+T  + +   I    +PS ++ F   T S +      S 
Sbjct: 141 -------IDFSS------LSSVTTESDNQKKIHHHQRPSETAPFASQTQSLSTTVSSFSK 187

Query: 236 SLKRKCNSMDDAALKCGS--SSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRK 293
           S KRKCNS +    KC S  SSGRCHCSKKRK + +R+ RVPAIS+KM+D+PPDDYSWRK
Sbjct: 188 STKRKCNSENLLTGKCASASSSGRCHCSKKRKIKQRRIIRVPAISAKMSDVPPDDYSWRK 247

Query: 294 YGQKPIKGSPHPR----CASV 310
           YGQKPIKGSPHPR    C+SV
Sbjct: 248 YGQKPIKGSPHPRGYYKCSSV 268

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SV15|WRK11_ARATH Probable WRKY transcription factor 11 OS=Arabidopsis thaliana GN=WRKY11 PE=2 SV=2

 Score =  150 bits (380), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/319 (37%), Positives = 159/319 (49%), Gaps = 66/319 (20%)

Query: 1   MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQTQYQE 60
           MAV+LM      D         + A+QEAAS+G+QS+   I++LS     P +Q      
Sbjct: 1   MAVDLMRFPKIDD---------QTAIQEAASQGLQSMEHLIRVLSNR---PEQQH----- 43

Query: 61  STSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSPPPPPPPPPQ 120
                      + +     +  V+ FK VISLL R  TGHARFRR PV S         Q
Sbjct: 44  -----------NVDCSEITDFTVSKFKTVISLLNR--TGHARFRRGPVHSTSSAASQKLQ 90

Query: 121 KEEKVHLQEPAGPSVQST-NHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPN--STVV 177
             + V   +P  P V++T NH               P    PP    +  S P+   T  
Sbjct: 91  -SQIVKNTQPEAPIVRTTTNH---------------PQIVPPPSSVTLDFSKPSIFGTKA 134

Query: 178 TKSDHVPSSINFSASATNSFISSLTGTAGDTDSIQPSFSSGFQFTTPS------SAGKPP 231
             ++   S  NFS S  +SF+SS     GD      S S+G  F   +      S+GKPP
Sbjct: 135 KSAELEFSKENFSVSLNSSFMSS--AITGDG-----SVSNGKIFLASAPLQPVNSSGKPP 187

Query: 232 LSSSSLKRKC----NSMDDAALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPD 287
           L+    +++C    +S   +    GS+ G+CHC K RK+R+KR  RVPAIS+K+ADIPPD
Sbjct: 188 LAGHPYRKRCLEHEHSESFSGKVSGSAYGKCHCKKSRKNRMKRTVRVPAISAKIADIPPD 247

Query: 288 DYSWRKYGQKPIKGSPHPR 306
           +YSWRKYGQKPIKGSPHPR
Sbjct: 248 EYSWRKYGQKPIKGSPHPR 266

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|O04336|WRK21_ARATH Probable WRKY transcription factor 21 OS=Arabidopsis thaliana GN=WRKY21 PE=2 SV=1

 Score =  123 bits (309), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 70/119 (58%), Positives = 84/119 (70%), Gaps = 9/119 (7%)

Query: 190 SASATNSFISSLTGTAGDTDSIQPSFSSGFQFTTPSSAGKPPLSSSSLKRKCNSMDD--A 247
           + S+T SF+SSL+   G   +I+   S  F F  PSS  +  L S   KRKC    D   
Sbjct: 222 TMSSTRSFVSSLS-IDGSVANIEGKNS--FHFGVPSSTDQNSLHS---KRKCPLKGDEHG 275

Query: 248 ALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPR 306
           +LKCGSSS RCHC+KKRK R++R  RVPAIS+K+ADIPPDDYSWRKYGQKPIKGSP+PR
Sbjct: 276 SLKCGSSS-RCHCAKKRKHRVRRSIRVPAISNKVADIPPDDYSWRKYGQKPIKGSPYPR 333

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SR07|WRK39_ARATH Probable WRKY transcription factor 39 OS=Arabidopsis thaliana GN=WRKY39 PE=2 SV=1

 Score =  116 bits (290), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/152 (50%), Positives = 93/152 (61%), Gaps = 21/152 (13%)

Query: 166 QVHKSNPNSTVVTKSDHVPSSINFSASATN---SFISSLTGTAGDTDSIQPSFSSGFQFT 222
           Q+  S  NS V  K D   SS  ++ S +N   SF+SSL+  A  TD  + SF      T
Sbjct: 153 QIAYSRSNSGVNLKFDGSGSSC-YTPSVSNGSRSFVSSLSMDASVTDYDRNSF----HLT 207

Query: 223 TPSSAGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMA 282
                    LS  S ++    M   +LKCGS S +CHCSKKRK R+KR  +VPAIS+K+A
Sbjct: 208 G--------LSRGSDQQHTRKMCSGSLKCGSRS-KCHCSKKRKLRVKRSIKVPAISNKIA 258

Query: 283 DIPPDDYSWRKYGQKPIKGSPHPR----CASV 310
           DIPPD+YSWRKYGQKPIKGSPHPR    C+SV
Sbjct: 259 DIPPDEYSWRKYGQKPIKGSPHPRGYYKCSSV 290

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJA8|WRK17_ARATH Probable WRKY transcription factor 17 OS=Arabidopsis thaliana GN=WRKY17 PE=2 SV=2

 Score =  112 bits (281), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 4/86 (4%)

Query: 225 SSAGKPPLSSSSLKRKCNSMDDA----ALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSK 280
           +S+GKPPLS    +++C   D +        GS +G+CHC K RK+R+KR  RVPA+S+K
Sbjct: 178 TSSGKPPLSGLPYRKRCFEHDHSEGFSGKISGSGNGKCHCKKSRKNRMKRTVRVPAVSAK 237

Query: 281 MADIPPDDYSWRKYGQKPIKGSPHPR 306
           +ADIPPD+YSWRKYGQKPIKGSPHPR
Sbjct: 238 IADIPPDEYSWRKYGQKPIKGSPHPR 263

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q93WU6|WRK74_ARATH Probable WRKY transcription factor 74 OS=Arabidopsis thaliana GN=WRKY74 PE=2 SV=2

 Score =  110 bits (275), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 64/124 (51%), Positives = 81/124 (65%), Gaps = 14/124 (11%)

Query: 191 ASATNSFISSLTGTAGDTDSIQPSFSSGFQFTTPSSAGKPPLSSSSLKRKCNSMDDAALK 250
           ++ + SF+SSL+     TD  + SF        P   G   +S  S +  C+     +LK
Sbjct: 177 SNGSRSFVSSLSMDGSVTDYDRNSF---HLIGLPQ--GSDHISQHSRRTSCS----GSLK 227

Query: 251 CGSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPR---- 306
           CGS S +CHCSKKRK R+KR  +VPAIS+K+ADIPPD+YSWRKYGQKPIKGSPHPR    
Sbjct: 228 CGSKS-KCHCSKKRKLRVKRSIKVPAISNKIADIPPDEYSWRKYGQKPIKGSPHPRGYYK 286

Query: 307 CASV 310
           C+SV
Sbjct: 287 CSSV 290

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q32SG4|WRKY1_MAIZE Protein WRKY1 OS=Zea mays PE=1 SV=1

 Score =  107 bits (268), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/96 (54%), Positives = 65/96 (67%), Gaps = 5/96 (5%)

Query: 219 FQFTTPSSAGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCSKKRKSRIKRVTRVPAIS 278
           FQ  + S     P      +R+C   +D   +C + S RCHCSKKRK RI+R  +VPAIS
Sbjct: 266 FQLLSGSQTASTPELGLVQRRRCAGREDGTGRCATGS-RCHCSKKRKLRIRRSIKVPAIS 324

Query: 279 SKMADIPPDDYSWRKYGQKPIKGSPHPR----CASV 310
           +K+ADIP D++SWRKYGQKPIKGSPHPR    C+SV
Sbjct: 325 NKVADIPADEFSWRKYGQKPIKGSPHPRGYYKCSSV 360

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Zea mays (taxid: 4577)

>sp|O64747|WRK35_ARATH Probable WRKY transcription factor 35 OS=Arabidopsis thaliana GN=WRKY35 PE=2 SV=1

 Score = 54.7 bits (130), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 5/59 (8%)

Query: 253 SSSGRCHCSKKRKSRIKRVTRVPA---ISSKMAD--IPPDDYSWRKYGQKPIKGSPHPR 306
           SSS R    K+RKS+ K+V  +PA   ++S+ +   +P D ++WRKYGQKPIKGSP+PR
Sbjct: 177 SSSPRNLGIKRRKSQAKKVVCIPAPAAMNSRSSGEVVPSDLWAWRKYGQKPIKGSPYPR 235

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SA80|WRK14_ARATH Probable WRKY transcription factor 14 OS=Arabidopsis thaliana GN=WRKY14 PE=2 SV=2

 Score = 51.6 bits (122), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 37/50 (74%), Gaps = 5/50 (10%)

Query: 262 KKRKSRIKRVTRVPA---ISSKMAD--IPPDDYSWRKYGQKPIKGSPHPR 306
           K+RKS+ K+V  +PA   ++S+ +   +P D ++WRKYGQKPIKGSP PR
Sbjct: 188 KRRKSQAKKVVCIPAPAAMNSRSSGEVVPSDLWAWRKYGQKPIKGSPFPR 237

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	311
224063483	358	predicted protein [Populus trichocarpa]	0.945	0.821	0.623	3e-90
259121393	357	WRKY transcription factor 14 [(Populus t	0.945	0.823	0.615	3e-90
255538212	377	WRKY transcription factor, putative [Ric	0.951	0.785	0.604	2e-86
449531009	384	PREDICTED: probable WRKY transcription f	0.951	0.770	0.562	4e-81
449447019	383	PREDICTED: probable WRKY transcription f	0.951	0.772	0.563	5e-81
156118320	354	WRKY transcription factor 2 [Solanum tub	0.958	0.841	0.554	3e-76
225458699	347	PREDICTED: probable WRKY transcription f	0.900	0.806	0.548	1e-75
10798760	350	WRKY transcription factor NtEIG-D48 [Nic	0.942	0.837	0.562	2e-75
254034328	343	WRKY1 [Ipomoea batatas]	0.942	0.854	0.540	3e-75
259121417	334	WRKY transcription factor 26 [(Populus t	0.893	0.832	0.552	8e-75

>gi|224063483|ref|XP_002301166.1| predicted protein [Populus trichocarpa] gi|222842892|gb|EEE80439.1| predicted protein [Populus trichocarpa]

 Score =  337 bits (865), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 205/329 (62%), Positives = 237/329 (72%), Gaps = 35/329 (10%)

Query: 1   MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQTQYQE 60
           MAVELMMGY  GD FA   KM+ENAV+EAA+ G+QS+ E IKLL +  Q+   +Q  YQE
Sbjct: 1   MAVELMMGYS-GDCFA--TKMQENAVREAAASGIQSVEEVIKLL-KQNQL---EQQHYQE 53

Query: 61  -STSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRP-RTGHARFRRAPVGSPPPPP--- 115
            S +SS +NL  D  I    ++AVNNFKKVISLLGR  RTGHARFRRAP  +PP      
Sbjct: 54  LSAASSSSNLGTDN-IMTVTDMAVNNFKKVISLLGRTTRTGHARFRRAP-DTPPTQQQIR 111

Query: 116 PPPPQKEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNST 175
             P  ++EK  +QEP GPSV++ N    EQ SAF+VY PTP+HRLPPLPH   + +P   
Sbjct: 112 EEPESQQEKRQVQEP-GPSVRAINSQPTEQASAFRVYQPTPIHRLPPLPHNQQQKSP--L 168

Query: 176 VVTKS-----DHVPSSINFS----ASATNSFISSLTGTAGDTDSIQPSFSSGFQFTTPSS 226
           +VTK      + +P++INFS     S+  SF+SSLTG   +TD  Q S  S F FT PS 
Sbjct: 169 LVTKKGLSDRNEIPTTINFSNSPSISSATSFMSSLTG---ETDGFQRSMPSRFHFTQPS- 224

Query: 227 AGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCSKK-RKSRIKRVTRVPAISSKMADIP 285
           AGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCSKK RKSR KRV RVPAIS+KMADIP
Sbjct: 225 AGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCSKKSRKSRAKRVVRVPAISNKMADIP 284

Query: 286 PDDYSWRKYGQKPIKGSPHPR----CASV 310
           PDDYSWRKYGQKPIKGSPHPR    C+SV
Sbjct: 285 PDDYSWRKYGQKPIKGSPHPRGYYKCSSV 313

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|259121393|gb|ACV92016.1| WRKY transcription factor 14 [(Populus tomentosa x P. bolleana) x P. tomentosa]

 Score =  337 bits (865), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 202/328 (61%), Positives = 237/328 (72%), Gaps = 34/328 (10%)

Query: 1   MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQTQYQE 60
           MAVELMMGY  GD FA   KM+ENAV+EAA+ G+QS+ E IKLL ++      +Q  YQE
Sbjct: 1   MAVELMMGYS-GDCFA--TKMQENAVREAAASGIQSVEEVIKLLKQN----QLEQQHYQE 53

Query: 61  -STSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRP-RTGHARFRRAPVGSPPPPPP-- 116
            S +SS +NL  D  I    ++AVNNFKKVISLLGR  RTGHARFRRAP  +PP      
Sbjct: 54  LSAASSSSNLGTD-NIMTVTDMAVNNFKKVISLLGRTTRTGHARFRRAP-DTPPNRQQIR 111

Query: 117 -PPPQKEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNST 175
             P  ++EK  +QEP GPSV++ N    EQ SAF+VY PTP+HRLPPLP+   + +P   
Sbjct: 112 GEPESQQEKRQVQEP-GPSVRAINSQPTEQASAFRVYQPTPIHRLPPLPNNQQQKSP--L 168

Query: 176 VVTKS-----DHVPSSINFS----ASATNSFISSLTGTAGDTDSIQPSFSSGFQFTTPSS 226
           +VTK      + +P++INFS     S+  SF+SSLTG   +TD  Q S S GF FT PS 
Sbjct: 169 LVTKKGLSDRNEIPTTINFSNSPSISSATSFMSSLTG---ETDGFQRSMSPGFHFTQPS- 224

Query: 227 AGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPP 286
           AGKPPLSSSSLKRKCNS+DDAALKCGSSSGRCHCSKKRKSR KRV RVPAIS+KM+DIPP
Sbjct: 225 AGKPPLSSSSLKRKCNSVDDAALKCGSSSGRCHCSKKRKSRAKRVIRVPAISNKMSDIPP 284

Query: 287 DDYSWRKYGQKPIKGSPHPR----CASV 310
           DDYSWRKYGQKPIKGSPHPR    C+SV
Sbjct: 285 DDYSWRKYGQKPIKGSPHPRGYYKCSSV 312

Source: (Populus tomentosa x P. bolleana) x P. tomentosa

Species: (Populus tomentosa x P. bolleana) x P. tomentosa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538212|ref|XP_002510171.1| WRKY transcription factor, putative [Ricinus communis] gi|223550872|gb|EEF52358.1| WRKY transcription factor, putative [Ricinus communis]

 Score =  325 bits (833), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 202/334 (60%), Positives = 232/334 (69%), Gaps = 38/334 (11%)

Query: 1   MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQ--QTQY 58
           MAVELMMGY  GDSFA   K++ENAV+EAA+ G+QS+ E IKLL ++      Q     +
Sbjct: 1   MAVELMMGYS-GDSFA--TKLQENAVREAATAGIQSVEEVIKLLQQNQLQQPPQYYSETF 57

Query: 59  QESTSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRP-RTGHARFRRAPVGSPPPPP-- 115
             S++SS TN      I    + AVNNFKKVISLLGR  RTGHARFRRAPV SP  P   
Sbjct: 58  SSSSNSSDTNPPSTDNIMAVTDAAVNNFKKVISLLGRTTRTGHARFRRAPVSSPASPTQQ 117

Query: 116 --PPPPQKEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPN 173
             P PPQ+ ++V  Q+P GPS    N    EQVSAF+VY PTP+HRLPPLP+  H  + +
Sbjct: 118 EHPKPPQQHQQV--QDP-GPSAGPLNSQQSEQVSAFRVYQPTPIHRLPPLPNNHHHHHHH 174

Query: 174 ST----------VVTK------SDHVPSSINFS----ASATNSFISSLTGTAGDTDSIQP 213
                       +VTK      S+  PS INFS     SA  SF+SSLTG   +TDS+Q 
Sbjct: 175 HQHQHQQQKAPLLVTKNGFSERSEAAPS-INFSNSPSISAATSFMSSLTG---ETDSLQR 230

Query: 214 SFSSGFQFTTP-SSAGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCSKKRKSRIKRVT 272
           S SSGFQF  P SS GKPPLSS+SLKRKCNSMDDAALKCGSSS RCHCSKKRKSR+KRV 
Sbjct: 231 SMSSGFQFANPASSVGKPPLSSTSLKRKCNSMDDAALKCGSSSSRCHCSKKRKSRVKRVI 290

Query: 273 RVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPR 306
           RVPAIS+KMADIPPDD+SWRKYGQKPIKGSPHPR
Sbjct: 291 RVPAISNKMADIPPDDFSWRKYGQKPIKGSPHPR 324

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449531009|ref|XP_004172480.1| PREDICTED: probable WRKY transcription factor 7-like [Cucumis sativus]

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 199/354 (56%), Positives = 234/354 (66%), Gaps = 58/354 (16%)

Query: 1   MAVELMMGYG-CGDSFAAAVKMEENA----VQEAASEGMQSIGEFIKLLSRSGQVPSEQQ 55
           MAVEL++G+G    S      MEENA    VQEAAS G+QS+  F++L+S +    + Q 
Sbjct: 1   MAVELLVGFGDATTSNHFTPNMEENAAVSAVQEAASAGIQSVQNFLRLMSHTT---NHQH 57

Query: 56  TQYQESTSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPV------- 108
           +Q+  STSS+P N       +  A+  VN FKKVISLL R RTGHARFRRAPV       
Sbjct: 58  SQHDSSTSSTPNN-----GYQAVADSVVNKFKKVISLLDRNRTGHARFRRAPVLTTTTTT 112

Query: 109 ---GSPPPPPPPPPQKEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTP--VHRLPPL 163
                PPPPP   PQ ++       + P VQ      +E VSAFKVYCPTP  V RLPPL
Sbjct: 113 TTTPPPPPPPKVKPQHQDPSSSSPISVPPVQVKK---QESVSAFKVYCPTPSSVVRLPPL 169

Query: 164 PHQ-----VHKSNP------NSTVVTKSDHVP-----SSINFSAS----ATNSFISSLTG 203
           PH       H SN        S+VV K+  V      ++INF+AS    A NS+ISSLTG
Sbjct: 170 PHNNPHQPSHPSNTFQAQQNTSSVVLKNGSVDRKDATTTINFAASPPISAANSYISSLTG 229

Query: 204 TAGDTDSIQPSFSSGFQFT---TPSSAGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHC 260
              DT+S+QPS SSGFQFT     SSAGKPPLSSSSLKRKCNSM+D+A+KCGSSSGRCHC
Sbjct: 230 ---DTESLQPSLSSGFQFTHMSQVSSAGKPPLSSSSLKRKCNSMEDSAMKCGSSSGRCHC 286

Query: 261 SKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPR----CASV 310
           SKKRK+RIKRV RVPA+SSK+ADIPPDDYSWRKYGQKPIKGSPHPR    C+S+
Sbjct: 287 SKKRKNRIKRVIRVPAVSSKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSL 340

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449447019|ref|XP_004141267.1| PREDICTED: probable WRKY transcription factor 7-like [Cucumis sativus] gi|315613828|gb|ADU52519.1| WRKY protein [Cucumis sativus]

 Score =  306 bits (785), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 199/353 (56%), Positives = 234/353 (66%), Gaps = 57/353 (16%)

Query: 1   MAVELMMGYGCGD-SFAAAVKMEENA----VQEAASEGMQSIGEFIKLLSRSGQVPSEQQ 55
           MAVEL++G+G    S      MEENA    VQEAAS G+QS+  F++L+S +    + Q 
Sbjct: 1   MAVELLVGFGDATPSNHFTPNMEENAAVSAVQEAASAGIQSVQNFLRLMSHTT---NHQH 57

Query: 56  TQYQESTSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPV------- 108
           +Q+  STSS+P N       +  A+  VN FKKVISLL R RTGHARFRRAPV       
Sbjct: 58  SQHDSSTSSTPNN-----GYQAVADSVVNKFKKVISLLDRNRTGHARFRRAPVLTTTTTT 112

Query: 109 --GSPPPPPPPPPQKEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTP--VHRLPPLP 164
               PPPPP   PQ ++       + P VQ      +E VSAFKVYCPTP  V RLPPLP
Sbjct: 113 TTPPPPPPPKVKPQHQDPSSSSPISVPPVQVKK---QESVSAFKVYCPTPSSVVRLPPLP 169

Query: 165 HQ-----VHKSNP------NSTVVTKSDHVP-----SSINFSAS----ATNSFISSLTGT 204
           H       H SN        S+VV K+  V      ++INF+AS    A NS+ISSLTG 
Sbjct: 170 HNNPHQPSHPSNTFQAQQNTSSVVLKNGSVDRKDATTTINFAASPPISAANSYISSLTG- 228

Query: 205 AGDTDSIQPSFSSGFQFT---TPSSAGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCS 261
             DT+S+QPS SSGFQFT     SSAGKPPLSSSSLKRKCNSM+D+A+KCGSSSGRCHCS
Sbjct: 229 --DTESLQPSLSSGFQFTHMSQVSSAGKPPLSSSSLKRKCNSMEDSAMKCGSSSGRCHCS 286

Query: 262 KKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPR----CASV 310
           KKRK+RIKRV RVPA+SSK+ADIPPDDYSWRKYGQKPIKGSPHPR    C+S+
Sbjct: 287 KKRKNRIKRVIRVPAVSSKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSL 339

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|156118320|gb|ABU49721.1| WRKY transcription factor 2 [Solanum tuberosum]

 Score =  291 bits (745), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 178/321 (55%), Positives = 219/321 (68%), Gaps = 23/321 (7%)

Query: 1   MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQTQYQE 60
           MAV+LM      D+F++  KMEE AVQEAA+ G+QS+ + I+LLS+S Q   +Q+  +Q+
Sbjct: 1   MAVDLMTSGYRTDNFSS--KMEETAVQEAATAGLQSVEKLIRLLSQSHQNQRQQKPNFQD 58

Query: 61  STSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSPPPPPPPPPQ 120
           S+SSS  N     + +  A+ AVN FKK ISLL + RTGHARFRR P+ SP PP P  PQ
Sbjct: 59  SSSSSLGNSSVSADYQAVADAAVNKFKKFISLLDKNRTGHARFRRGPISSPSPPLPSKPQ 118

Query: 121 KEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNSTVVTKS 180
           +     LQ+P          + K Q S  K+YCPTP+ RLPPLPH   +   N ++  K 
Sbjct: 119 Q-----LQQPIKNQNPQIEEIEKPQTSNTKIYCPTPIQRLPPLPHHHLQLVKNGSIERKE 173

Query: 181 DHVPSSINFSA-SATNSFISSLTGTAGDTDSIQPSFSSGFQFTT---PSSAGKPPLSSSS 236
               ++INF++ S   SF+SSLTG   +T+S+Q S SSGFQ T     SSAG+PPLS+SS
Sbjct: 174 --ASTTINFASPSPATSFMSSLTG---ETESLQQSLSSGFQITNLSQVSSAGRPPLSTSS 228

Query: 237 LKRKCNSMDDAALKC---GSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRK 293
            KRKC+SMDD ALKC   G SSGRCHC KKRKSR+KRV RVPAIS KMADIPPDDYSWRK
Sbjct: 229 FKRKCSSMDDTALKCSSAGGSSGRCHCPKKRKSRVKRVVRVPAISMKMADIPPDDYSWRK 288

Query: 294 YGQKPIKGSPHPR----CASV 310
           YGQKPIKGSPHPR    C+SV
Sbjct: 289 YGQKPIKGSPHPRGYYKCSSV 309

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458699|ref|XP_002284966.1| PREDICTED: probable WRKY transcription factor 7 [Vitis vinifera]

 Score =  289 bits (739), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 182/332 (54%), Positives = 215/332 (64%), Gaps = 52/332 (15%)

Query: 1   MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQTQYQE 60
           MAVELMMGY   DSFAA  KME+NA+QEAAS G+QS+ + +KLLS+             +
Sbjct: 1   MAVELMMGYA-NDSFAA--KMEDNALQEAASAGIQSVEKLVKLLSQC------------Q 45

Query: 61  STSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSPPPPPPPPPQ 120
               + T+LE D +    A++AV  FK+VISLL R RTGHARFRRAP+  P  PP     
Sbjct: 46  QQKQTTTSLEIDIDCTAVADMAVTKFKRVISLLDRTRTGHARFRRAPLVPPQQPPQDTDT 105

Query: 121 KEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSN--------- 171
                H Q PA            +Q S  K+YCPTPVHRLPPLPH     +         
Sbjct: 106 PVPVSHHQ-PA----------EDKQTSVSKIYCPTPVHRLPPLPHNHQPHHHHHHHSPNL 154

Query: 172 --PNSTVVTKSDHVPSSINF----SASATNSFISSLTGTAGDTDSIQPSFSSGFQFTT-- 223
             P    + K + + ++INF    S SA NSF+SSLTG   DT+S+QPS SSGF  +   
Sbjct: 155 MLPKKVAIEKKESM-TTINFTTSHSVSAPNSFVSSLTG---DTESVQPSLSSGFHISNLS 210

Query: 224 -PSSAGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMA 282
             SSAG+PPLSSSSLKRKC+SMDDA  KCGSS GRCHCSKKRK R+KRV RVPAIS+KMA
Sbjct: 211 QVSSAGRPPLSSSSLKRKCSSMDDAGAKCGSSFGRCHCSKKRKLRVKRVVRVPAISTKMA 270

Query: 283 DIPPDDYSWRKYGQKPIKGSPHPR----CASV 310
           DIPPDD+SWRKYGQKPIKGSPHPR    C+SV
Sbjct: 271 DIPPDDFSWRKYGQKPIKGSPHPRGYYKCSSV 302

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10798760|dbj|BAB16432.1| WRKY transcription factor NtEIG-D48 [Nicotiana tabacum]

 Score =  288 bits (738), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 181/322 (56%), Positives = 221/322 (68%), Gaps = 29/322 (9%)

Query: 1   MAVELMM-GYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQTQYQ 59
           MAVELM  GY   DSF+   KMEENAVQEAA+ G+QS+ + I+LLS+S Q   +QQ +  
Sbjct: 1   MAVELMTSGYSRRDSFS--TKMEENAVQEAATAGLQSVEKLIRLLSQSHQNQQQQQQKLD 58

Query: 60  ESTSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSPPPPPPPPP 119
           ++ S S        +    A+VAVN FKK ISLL + RTGHARFR+ P+ +P PPPP P 
Sbjct: 59  QNPSVSA-------DYTAVADVAVNKFKKFISLLDKNRTGHARFRKGPISTPLPPPPKPQ 111

Query: 120 QKEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNSTVVTK 179
           Q+    +  +     ++ T    K Q++  K+YCPTP+ RLPPLPH   +   N ++  K
Sbjct: 112 QQRLNQNSIKNQNLQIEETE---KPQINTPKIYCPTPIQRLPPLPHNHLQLVKNGSIERK 168

Query: 180 SDHVPSSINF-SASATNSFISSLTGTAGDTDSIQPSFSSGFQFT---TPSSAGKPPLSSS 235
                ++INF SAS  NSF+SSLTG   +T+S+Q S SSGFQ T   T SSAG+PPLS+S
Sbjct: 169 ES--STTINFASASPANSFMSSLTG---ETESLQQSLSSGFQITNLSTVSSAGRPPLSTS 223

Query: 236 SLKRKCNSMDDAALKC---GSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWR 292
           S KRKC+SMDD ALKC   G SSGRCHC KKRKSR+KRV RVPAIS KMADIPPDDYSWR
Sbjct: 224 SFKRKCSSMDDTALKCNSAGGSSGRCHCPKKRKSRVKRVVRVPAISMKMADIPPDDYSWR 283

Query: 293 KYGQKPIKGSPHPR----CASV 310
           KYGQKPIKGSPHPR    C+SV
Sbjct: 284 KYGQKPIKGSPHPRGYYKCSSV 305

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|254034328|gb|ACT55331.1| WRKY1 [Ipomoea batatas]

 Score =  288 bits (736), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 179/331 (54%), Positives = 209/331 (63%), Gaps = 38/331 (11%)

Query: 1   MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQTQYQE 60
           MAVEL+  Y     FAA  KMEENAVQEAA+ G QS+ + I+LLS         Q+Q Q 
Sbjct: 1   MAVELLSSYR-NSGFAA--KMEENAVQEAAAAGFQSVEKLIRLLS---------QSQPQV 48

Query: 61  STSSSP----TNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSPPPPPP 116
           S  SSP       E   + +  A+VAV+ FKK ISLL R RTGHARFRR P+ +PP  P 
Sbjct: 49  SGFSSPPPATAAGEGSADYQAVADVAVSKFKKFISLLDRTRTGHARFRRGPICNPPHAPQ 108

Query: 117 PPPQKEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNSTV 176
           P  Q++     +  A    +   +       A K+Y P P+ RLPPLPH  H    N   
Sbjct: 109 P--QRKMDQESEPVASGQTRVVENSENPHTGASKMYSPPPIQRLPPLPHNHHHMLKNVPA 166

Query: 177 VTKSDHVPSS--INFSASATNS----FISSLTGTAGDTDSIQPSFSSGFQFTT---PSSA 227
               D   SS  INFSAS   S    FISSLTG   DT+S+QPS SSGFQ T     SSA
Sbjct: 167 PPAPDRKESSTTINFSASQATSSPGSFISSLTG---DTESLQPSLSSGFQITNLSQVSSA 223

Query: 228 GKPPLSSSSLKRKCNSMDDAALKC----GSSSGRCHCSKKRKSRIKRVTRVPAISSKMAD 283
           G+PPLS+SS KRKCNSMDD++LKC    GS+SGRCHC KKRKSR+KRV R+PAIS KMAD
Sbjct: 224 GRPPLSTSSFKRKCNSMDDSSLKCSSAGGSASGRCHCPKKRKSRVKRVVRIPAISMKMAD 283

Query: 284 IPPDDYSWRKYGQKPIKGSPHPR----CASV 310
           IPPDD+SWRKYGQKPIKGSPHPR    C+SV
Sbjct: 284 IPPDDFSWRKYGQKPIKGSPHPRGYYKCSSV 314

Source: Ipomoea batatas

Species: Ipomoea batatas

Genus: Ipomoea

Family: Convolvulaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|259121417|gb|ACV92028.1| WRKY transcription factor 26 [(Populus tomentosa x P. bolleana) x P. tomentosa]

 Score =  286 bits (732), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 178/322 (55%), Positives = 219/322 (68%), Gaps = 44/322 (13%)

Query: 1   MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQTQYQE 60
           MAVEL+MGY   D FA   KMEENAVQEAAS G++S+ + I+LLS+  Q     Q  +Q 
Sbjct: 1   MAVELVMGYR-NDGFAITSKMEENAVQEAAS-GLESVNKLIRLLSQKNQ-----QNLHQS 53

Query: 61  STSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSPPPPPPPPPQ 120
           STS+S T+++ + + K  A+ AV+ FKKVISLLGR RTGHARFRRAPV +PP        
Sbjct: 54  STSTSRTSMDTEIDCKAVADAAVSKFKKVISLLGRNRTGHARFRRAPVSTPPI------N 107

Query: 121 KEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPP-LPHQVHK--SNPNSTVV 177
           + +++  Q P   +               KVY  TP+ ++PP + +Q H     P + V+
Sbjct: 108 QRQELSYQVPEANT---------------KVYYATPIQQIPPPVLNQNHYPILVPKNGVM 152

Query: 178 TKSDHVPSSINFS-ASATNSFISSLTGTAGDTDSIQPSFSSGFQFTTPS---SAGKPPLS 233
            + D   ++INFS +SA NSF+SSLTG   DTDS QPS SS FQFT  S   SAGKPPLS
Sbjct: 153 ERKDSATTTINFSYSSAGNSFVSSLTG---DTDSKQPSSSSAFQFTNVSQVSSAGKPPLS 209

Query: 234 SSSLKRKCNSMD-DAALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWR 292
           +SSLKRKC+S + D+A KCGS  GRCHCSKKRK R+KRV RVPAIS KM+DIPPDDYSWR
Sbjct: 210 TSSLKRKCSSENLDSAGKCGSP-GRCHCSKKRKMRLKRVVRVPAISLKMSDIPPDDYSWR 268

Query: 293 KYGQKPIKGSPHPR----CASV 310
           KYGQKPIKGSPHPR    C+SV
Sbjct: 269 KYGQKPIKGSPHPRGYYKCSSV 290

Source: (Populus tomentosa x P. bolleana) x P. tomentosa

Species: (Populus tomentosa x P. bolleana) x P. tomentosa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	311
TAIR|locus:2135967	353	WRKY7 "WRKY DNA-binding protei	0.890	0.784	0.482	1.1e-57
TAIR|locus:2125239	325	WRKY11 "WRKY DNA-binding prote	0.665	0.636	0.391	2.4e-35
TAIR|locus:2046653	321	WRKY17 "WRKY DNA-binding prote	0.652	0.632	0.388	1.3e-32
TAIR|locus:2064377	380	WRKY21 "WRKY DNA-binding prote	0.369	0.302	0.532	7.7e-31
TAIR|locus:2084943	330	WRKY39 "WRKY DNA-binding prote	0.453	0.427	0.475	1.4e-29
TAIR|locus:2058568	317	WRKY15 "WRKY DNA-binding prote	0.498	0.488	0.431	2.4e-28
UNIPROTKB|Q32SG4	397	Q32SG4 "Protein WRKY1" [Zea ma	0.395	0.309	0.484	1.4e-25
TAIR|locus:2148815	330	WRKY74 "WRKY DNA-binding prote	0.681	0.642	0.373	5.3e-24
TAIR|locus:2044777	427	WRKY35 "WRKY DNA-binding prote	0.173	0.126	0.508	2.4e-06
TAIR|locus:2204549	430	WRKY14 "WRKY DNA-binding prote	0.144	0.104	0.52	1.5e-05

TAIR|locus:2135967 WRKY7 "WRKY DNA-binding protein 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
 Identities = 165/342 (48%), Positives = 194/342 (56%)

Query:     1 MAVELMM-----GYGCGDSF---AAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPX 52
             M VELMM     G G GD F   AAA KME+ A++EAAS G+  + EF+KL+ +S Q   
Sbjct:     1 MTVELMMSSYSGGGGGGDGFPAIAAAAKMEDTALREAASAGIHGVEEFLKLIGQSQQ--- 57

Query:    53 XXXXXXXXXXXXXPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSXX 112
                          PT  +   EI    +VAVN+FKKVISLLGR RTGHARFRRAP  S  
Sbjct:    58 -------------PTE-KSQTEITAVTDVAVNSFKKVISLLGRSRTGHARFRRAPA-STQ 102

Query:   113 XXXXXXXQKEEKVHLQEPAGPSVQSTNHLSK-EQV----SAFKVYCPTPVHRLPPLPHQV 167
                      EE+V ++E   P   S     K EQ     SAF+VYCPTP+HR PPL H  
Sbjct:   103 TPFKQTPVVEEEVEVEEKK-PETSSVLTKQKTEQYHGGGSAFRVYCPTPIHRRPPLSHN- 160

Query:   168 HKSNPNSTVVTKSDH--------VPSSINFS----ASATNSFISSLTGTAGDTDSIQPSF 215
             + +N N T    S           PS+INF+     SATNSF+SS      DTDS     
Sbjct:   161 NNNNQNQTKNGSSSSSPPMLANGAPSTINFAPSPPVSATNSFMSS---HRCDTDSTH--M 215

Query:   216 SSGFQFTTXXXXXXXXXXXXXXXRKCNSMDDAALK--CGSS-SGRCHCSKKRKSRIKRVT 272
             SSGF+FT                R    +  A+LK  C SS S RCHCSKKRKSR+KRV 
Sbjct:   216 SSGFEFTNPSQLSGS--------RGKPPLSSASLKRRCNSSPSSRCHCSKKRKSRVKRVI 267

Query:   273 RVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPR----CASV 310
             RVPA+SSKMADIP D++SWRKYGQKPIKGSPHPR    C+SV
Sbjct:   268 RVPAVSSKMADIPSDEFSWRKYGQKPIKGSPHPRGYYKCSSV 309

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA;IPI

GO:0006457 "protein folding" evidence=RCA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0009408 "response to heat" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

TAIR|locus:2125239 WRKY11 "WRKY DNA-binding protein 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 332 (121.9 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
 Identities = 92/235 (39%), Positives = 120/235 (51%)

Query:    80 EVAVNNFKKVISLLGRPRTGHARFRRAPVGSXXXXXXXXXQKEEKVHLQEPAGPSVQST- 138
             +  V+ FK VISLL R  TGHARFRR PV S         Q +   + Q P  P V++T 
Sbjct:    52 DFTVSKFKTVISLLNR--TGHARFRRGPVHSTSSAASQKLQSQIVKNTQ-PEAPIVRTTT 108

Query:   139 NHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPN--STVVTKSDHVPSSINFSASATNS 196
             NH    Q+         P    PP    +  S P+   T    ++   S  NFS S  +S
Sbjct:   109 NH---PQI--------VP----PPSSVTLDFSKPSIFGTKAKSAELEFSKENFSVSLNSS 153

Query:   197 FISS-LTGTAGDTDSIQPSFSSGFQFTTXXXXXXXXXXXXXXXRKC----NSMDDAALKC 251
             F+SS +TG    ++     F +                     ++C    +S   +    
Sbjct:   154 FMSSAITGDGSVSNG--KIFLASAPLQPVNSSGKPPLAGHPYRKRCLEHEHSESFSGKVS 211

Query:   252 GSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPR 306
             GS+ G+CHC K RK+R+KR  RVPAIS+K+ADIPPD+YSWRKYGQKPIKGSPHPR
Sbjct:   212 GSAYGKCHCKKSRKNRMKRTVRVPAISAKIADIPPDEYSWRKYGQKPIKGSPHPR 266

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2046653 WRKY17 "WRKY DNA-binding protein 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 306 (112.8 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
 Identities = 92/237 (38%), Positives = 119/237 (50%)

Query:    80 EVAVNNFKKVISLLGRPRTGHARFRRAPVGSXXXXXXXXXQKEEKVHLQEPAGPSVQSTN 139
             +  V+ FKKVISLL R  +GHARFRR PV S                   P  P V+ T 
Sbjct:    51 DFTVSKFKKVISLLNR--SGHARFRRGPVHSPPSSSV-------------P--PPVKVTT 93

Query:   140 HLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNSTVV---TKSDHVP--SSINFSASAT 194
               +  Q+SA     P PV  +      V       +V    TKS  V   +  +FS S+ 
Sbjct:    94 P-APTQISA-----PAPVSFVQANQQSVTLDFTRPSVFGAKTKSSEVVEFAKESFSVSSN 147

Query:   195 NSFISS-LTGTAGDTDSIQPSFSSGFQFTTXXXXXXXXXXXXXXXRKCNSMDDA---ALK 250
             +SF+SS +TG  G        F +                     ++C   D +   + K
Sbjct:   148 SSFMSSAITGD-GSVSKGSSIFLAPAPAVPVTSSGKPPLSGLPYRKRCFEHDHSEGFSGK 206

Query:   251 C-GSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPR 306
               GS +G+CHC K RK+R+KR  RVPA+S+K+ADIPPD+YSWRKYGQKPIKGSPHPR
Sbjct:   207 ISGSGNGKCHCKKSRKNRMKRTVRVPAVSAKIADIPPDEYSWRKYGQKPIKGSPHPR 263

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0010200 "response to chitin" evidence=IEP

GO:0006865 "amino acid transport" evidence=RCA

TAIR|locus:2064377 WRKY21 "WRKY DNA-binding protein 21" [Arabidopsis thaliana (taxid:3702)]

 Score = 291 (107.5 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
 Identities = 66/124 (53%), Positives = 79/124 (63%)

Query:   185 SSINFSASATNSFISSLTGTAGDTDSIQPSFSSGFQFTTXXXXXXXXXXXXXXXRKCNSM 244
             SS   + S+T SF+SSL+   G   +I+   S  F F                 RKC   
Sbjct:   217 SSCTPTMSSTRSFVSSLS-IDGSVANIEGKNS--FHFGVPSSTDQNSLHSK---RKCPLK 270

Query:   245 DD--AALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGS 302
              D   +LKCGSSS RCHC+KKRK R++R  RVPAIS+K+ADIPPDDYSWRKYGQKPIKGS
Sbjct:   271 GDEHGSLKCGSSS-RCHCAKKRKHRVRRSIRVPAISNKVADIPPDDYSWRKYGQKPIKGS 329

Query:   303 PHPR 306
             P+PR
Sbjct:   330 PYPR 333

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

TAIR|locus:2084943 WRKY39 "WRKY DNA-binding protein 39" [Arabidopsis thaliana (taxid:3702)]

 Score = 287 (106.1 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
 Identities = 79/166 (47%), Positives = 94/166 (56%)

Query:   156 PVHRLP-PLPH---QVHKSNPNSTVVTKSDHVPSSINFSASATN---SFISSLTGTAGDT 208
             P  R P  L H   Q+  S  NS V  K D   SS  ++ S +N   SF+SSL+  A  T
Sbjct:   139 PPFRAPYQLIHNHQQIAYSRSNSGVNLKFDGSGSSC-YTPSVSNGSRSFVSSLSMDASVT 197

Query:   209 DSIQPSFSSGFQFTTXXXXXXXXXXXXXXXRKCNSMDDAALKCGSSSGRCHCSKKRKSRI 268
             D  + SF                       RK   M   +LKCGS S +CHCSKKRK R+
Sbjct:   198 DYDRNSFH---------LTGLSRGSDQQHTRK---MCSGSLKCGSRS-KCHCSKKRKLRV 244

Query:   269 KRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPR----CASV 310
             KR  +VPAIS+K+ADIPPD+YSWRKYGQKPIKGSPHPR    C+SV
Sbjct:   245 KRSIKVPAISNKIADIPPDEYSWRKYGQKPIKGSPHPRGYYKCSSV 290

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

TAIR|locus:2058568 WRKY15 "WRKY DNA-binding protein 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 73/169 (43%), Positives = 96/169 (56%)

Query:   156 PVHRLPP-LPHQVHKSNPNSTVVTKSDHVPSSINFSASATNSFISSLTGTAGDTDSIQ-- 212
             PVH + P L  +  K+ P  + +     +    +FS+S      SSL+    ++D+ +  
Sbjct:   100 PVHVISPVLLQEEPKTTPFQSPLPPPPQMIRKGSFSSSMKTIDFSSLSSVTTESDNQKKI 159

Query:   213 -----PSFSSGFQFTTXXXXXXXXXXXXXXXRKCNSMDDAALKCGS--SSGRCHCSKKRK 265
                  PS ++ F   T               RKCNS +    KC S  SSGRCHCSKKRK
Sbjct:   160 HHHQRPSETAPFASQTQSLSTTVSSFSKSTKRKCNSENLLTGKCASASSSGRCHCSKKRK 219

Query:   266 SRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPR----CASV 310
              + +R+ RVPAIS+KM+D+PPDDYSWRKYGQKPIKGSPHPR    C+SV
Sbjct:   220 IKQRRIIRVPAISAKMSDVPPDDYSWRKYGQKPIKGSPHPRGYYKCSSV 268

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

UNIPROTKB|Q32SG4 Q32SG4 "Protein WRKY1" [Zea mays (taxid:4577)]

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 63/130 (48%), Positives = 82/130 (63%)

Query:   186 SINFSASATNSFISSLTGTAGDTDSIQPSFSSG-FQFTTXXXXXXXXXXXXXXXRKCNSM 244
             S N +AS++ SF+SSL+   G   S+  S +S  FQ  +               R+C   
Sbjct:   233 SSNCTASSSRSFLSSLS-MEGSLASLDGSRTSRPFQLLSGSQTASTPELGLVQRRRCAGR 291

Query:   245 DDAALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPH 304
             +D   +C + S RCHCSKKRK RI+R  +VPAIS+K+ADIP D++SWRKYGQKPIKGSPH
Sbjct:   292 EDGTGRCATGS-RCHCSKKRKLRIRRSIKVPAISNKVADIPADEFSWRKYGQKPIKGSPH 350

Query:   305 PR----CASV 310
             PR    C+SV
Sbjct:   351 PRGYYKCSSV 360

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2148815 WRKY74 "WRKY DNA-binding protein 74" [Arabidopsis thaliana (taxid:3702)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 90/241 (37%), Positives = 115/241 (47%)

Query:    84 NNFKKVISLLGRPRTGHARFRRAPVGSXXXXXXXXXQKEEKVHLQEPAGPSVQSTNHLSK 143
             NN+K   SLL  P+  H  F  +PV S             K     PAGP      + + 
Sbjct:    65 NNYKFSSSLL--PQ--HM-FLESPVCSNNAISGCIPILAPKPLQIVPAGPPPLMLFNQNM 119

Query:   144 EQVSAFKVYCPTPVHRLPPLPHQ-VHK------SNPNSTVVTKSDHVPSSINFSASATN- 195
                 +F    P     + P P+Q +H       S   S +  K D    +  +S S +N 
Sbjct:   120 CLDKSFLELKPPSSRAVDPKPYQFIHTHQQGVYSRSKSGLNLKFDGSIGASCYSPSISNG 179

Query:   196 --SFISSLTGTAGDTDSIQPSFSSGFQFTTXXXXXXXXXXXXXXXRKCNSMDDAALKCGS 253
               SF+SSL+     TD  + SF                         C+     +LKCGS
Sbjct:   180 SRSFVSSLSMDGSVTDYDRNSFH-----LIGLPQGSDHISQHSRRTSCSG----SLKCGS 230

Query:   254 SSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPR----CAS 309
              S +CHCSKKRK R+KR  +VPAIS+K+ADIPPD+YSWRKYGQKPIKGSPHPR    C+S
Sbjct:   231 KS-KCHCSKKRKLRVKRSIKVPAISNKIADIPPDEYSWRKYGQKPIKGSPHPRGYYKCSS 289

Query:   310 V 310
             V
Sbjct:   290 V 290

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

TAIR|locus:2044777 WRKY35 "WRKY DNA-binding protein 35" [Arabidopsis thaliana (taxid:3702)]

 Score = 135 (52.6 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 30/59 (50%), Positives = 42/59 (71%)

Query:   253 SSSGRCHCSKKRKSRIKRVTRVPA---ISSKMAD--IPPDDYSWRKYGQKPIKGSPHPR 306
             SSS R    K+RKS+ K+V  +PA   ++S+ +   +P D ++WRKYGQKPIKGSP+PR
Sbjct:   177 SSSPRNLGIKRRKSQAKKVVCIPAPAAMNSRSSGEVVPSDLWAWRKYGQKPIKGSPYPR 235

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0009555 "pollen development" evidence=IMP

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2204549 WRKY14 "WRKY DNA-binding protein 14" [Arabidopsis thaliana (taxid:3702)]

 Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 26/50 (52%), Positives = 37/50 (74%)

Query:   262 KKRKSRIKRVTRVPA---ISSKMAD--IPPDDYSWRKYGQKPIKGSPHPR 306
             K+RKS+ K+V  +PA   ++S+ +   +P D ++WRKYGQKPIKGSP PR
Sbjct:   188 KRRKSQAKKVVCIPAPAAMNSRSSGEVVPSDLWAWRKYGQKPIKGSPFPR 237

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	311
pfam10533	47	pfam10533, Plant_zn_clust, Plant zinc cluster doma	2e-18
smart00774	59	smart00774, WRKY, DNA binding domain	2e-10
pfam03106	60	pfam03106, WRKY, WRKY DNA -binding domain	4e-09
PRK04596	248	PRK04596, minC, septum formation inhibitor; Review	2e-04

>gnl|CDD|192617 pfam10533, Plant_zn_clust, Plant zinc cluster domain

 Score = 77.0 bits (190), Expect = 2e-18
 Identities = 32/47 (68%), Positives = 39/47 (82%), Gaps = 1/47 (2%)

Query: 238 KRKCNSMDDAALKCG-SSSGRCHCSKKRKSRIKRVTRVPAISSKMAD 283
           K++C+  +D+  KC  SSSGRCHCSKKRKSR+KR  RVPAISSK+AD
Sbjct: 1   KKRCSEANDSEGKCAASSSGRCHCSKKRKSRVKRTIRVPAISSKIAD 47

This zinc binding domain was identified by Babu and colleagues and found associated with the WRKY domain pfam03106. Length = 47

>gnl|CDD|214815 smart00774, WRKY, DNA binding domain

 Score = 55.6 bits (135), Expect = 2e-10
 Identities = 17/23 (73%), Positives = 18/23 (78%), Gaps = 1/23 (4%)

Query: 286 PDD-YSWRKYGQKPIKGSPHPRC 307
            DD Y WRKYGQK IKGSP+PR 
Sbjct: 1   LDDGYQWRKYGQKVIKGSPYPRS 23

The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding. Length = 59

>gnl|CDD|145969 pfam03106, WRKY, WRKY DNA -binding domain

 Score = 51.8 bits (125), Expect = 4e-09
 Identities = 16/22 (72%), Positives = 18/22 (81%)

Query: 285 PPDDYSWRKYGQKPIKGSPHPR 306
             D Y+WRKYGQKP+KGSP PR
Sbjct: 1   LDDGYNWRKYGQKPVKGSPFPR 22

Length = 60

>gnl|CDD|235309 PRK04596, minC, septum formation inhibitor; Reviewed

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 90  ISLLGRPRTGHARFRRAPVGSPPPPPPPPPQKEEKVHLQEPAGPSVQSTNHLSKEQVSA 148
           + LL + R   A++ RA V  PPPPPPPP + E    +  PA   +Q T   S +Q+ A
Sbjct: 102 LPLLAKFR---AQYERAAVSPPPPPPPPPARAEPAPPVARPAPGRMQRTAVRSGQQLYA 157

Length = 248

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	311
PF10533	47	Plant_zn_clust: Plant zinc cluster domain; InterPr	99.51
smart00774	59	WRKY DNA binding domain. The WRKY domain is a DNA	99.29
PF03106	60	WRKY: WRKY DNA -binding domain; InterPro: IPR00365	99.28
PF05344	65	DUF746: Domain of Unknown Function (DUF746); Inter	90.59

>PF10533 Plant_zn_clust: Plant zinc cluster domain; InterPro: IPR018872 This zinc binding domain is found associated with the WRKY domain IPR003657 from INTERPRO []

Probab=99.51  E-value=8.5e-15  Score=105.84  Aligned_cols=46  Identities=76%  Similarity=1.173  Sum_probs=41.6

Q ss_pred             cccCCCCCcccccc-CCCCCccccccccccccceeEEEeccCCCCCC
Q 021515          238 KRKCNSMDDAALKC-GSSSGRCHCSKKRKSRIKRVTRVPAISSKMAD  283 (311)
Q Consensus       238 krkC~~~~~~~~~~-~~~~~~~~~~Krrk~~~kr~vrvp~~s~~~~~  283 (311)
                      ||+|+++++.+++| .+++|+|||+||||+|+||+||||+|+++++|
T Consensus         1 krkC~~~~~~~~~~~~sssgrCHCsKkRK~RvKR~irVPAiS~K~AD   47 (47)
T PF10533_consen    1 KRKCHSHNDSSGKCKCSSSGRCHCSKKRKSRVKRTIRVPAISSKIAD   47 (47)
T ss_pred             CCcccccCcccCccccCCCCcccCCCcccccceeeEEeecccccccC
Confidence            68999998888887 57789999999999999999999999988765

>smart00774 WRKY DNA binding domain

Probab=99.29  E-value=9.8e-13  Score=99.23  Aligned_cols=25  Identities=68%  Similarity=1.283  Sum_probs=23.7

Q ss_pred             CCCCchhhhcCCccCCCCCCCC----CCC
Q 021515          285 PPDDYSWRKYGQKPIKGSPHPR----CAS  309 (311)
Q Consensus       285 ~~Dgy~WRKYGQK~Ikgs~~PR----Cs~  309 (311)
                      ++|||.|||||||.|+|++|||    |++
T Consensus         1 ~~DGy~WRKYGQK~ikgs~~pRsYYrCt~   29 (59)
T smart00774        1 LDDGYQWRKYGQKVIKGSPFPRSYYRCTY   29 (59)
T ss_pred             CCCcccccccCcEecCCCcCcceEEeccc
Confidence            4899999999999999999999    987

The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding.

>PF03106 WRKY: WRKY DNA -binding domain; InterPro: IPR003657 The WRKY domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger- like motif

Probab=99.28  E-value=3.1e-13  Score=101.77  Aligned_cols=26  Identities=65%  Similarity=1.212  Sum_probs=21.8

Q ss_pred             CCCCchhhhcCCccCCCCCCCC----CCCC
Q 021515          285 PPDDYSWRKYGQKPIKGSPHPR----CASV  310 (311)
Q Consensus       285 ~~Dgy~WRKYGQK~Ikgs~~PR----Cs~~  310 (311)
                      ++|||.|||||||.|+|++|||    |+..
T Consensus         1 ~~Dgy~WRKYGqK~i~g~~~pRsYYrCt~~   30 (60)
T PF03106_consen    1 LDDGYRWRKYGQKNIKGSPYPRSYYRCTHP   30 (60)
T ss_dssp             --SSS-EEEEEEEEETTTTCEEEEEEEECT
T ss_pred             CCCCCchhhccCcccCCCceeeEeeecccc
Confidence            4899999999999999999999    8864

The WRKY domain is found in one or two copies in a superfamily of plant transcription factors involved in the regulation of various physiological programs that are unique to plants, including pathogen defence, senescence, trichome development and the biosynthesis of secondary metabolites. The WRKY domain binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core of the W box is essential for function and WRKY binding []. Some proteins known to contain a WRKY domain include Arabidopsis thaliana ZAP1 (Zinc-dependent Activator Protein-1) and AtWRKY44/TTG2, a protein involved in trichome development and anthocyanin pigmentation; and wild oat ABF1-2, two proteins involved in the gibberelic acid-induced expression of the alpha-Amy2 gene. Structural studies indicate that this domain is a four-stranded beta-sheet with a zinc binding pocket, forming a novel zinc and DNA binding structure []. The WRKYGQK residues correspond to the most N-terminal beta-strand, which enables extensive hydrophobic interactions, contributing to the structural stability of the beta-sheet.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2AYD_A 1WJ2_A 2LEX_A.

>PF05344 DUF746: Domain of Unknown Function (DUF746); InterPro: IPR008008 This is a short conserved region found in some transposons

Probab=90.59  E-value=0.43  Score=37.26  Aligned_cols=57  Identities=25%  Similarity=0.222  Sum_probs=38.6

Q ss_pred             HHHHHHHHhccCCCCCccccccccccCCCCCCCCCCchhHHHHHHHHHhhhhhhhhccCCCCCCc--cccccCCCC
Q 021515           36 SIGEFIKLLSRSGQVPSEQQTQYQESTSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGH--ARFRRAPVG  109 (311)
Q Consensus        36 S~e~Li~lLSq~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~itd~AVsKFKKVISLL~rtRTGH--ARFRR~Pv~  109 (311)
                      .+++||++||++-.   ..+  ..         .....| ..++..-|..|++-+=.||  ++||  +|+|-|=.+
T Consensus         2 ~~~~fIrlLs~~~s---~~~--Aa---------~~lG~~-~~~v~~wv~~fR~wll~LD--PSG~~E~RVRLg~r~   60 (65)
T PF05344_consen    2 KARAFIRLLSQQIS---VAQ--AA---------DRLGTD-PGTVRRWVRMFRQWLLQLD--PSGHWEARVRLGVRP   60 (65)
T ss_pred             cHHHHHHHhccccc---HHH--HH---------HHHCcC-HHHHHHHHHHHHHHHHHcC--CCCChHHHhhcCCCC
Confidence            47899999998722   001  00         011222 3455678999999999999  8999  999977643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	311
2ayd_A	76	Crystal Structure Of The C-Terminal Wrky Domainof A		2e-04

>pdb|2AYD|A Chain A, Crystal Structure Of The C-Terminal Wrky Domainof Atwrky1, An Sa-Induced And Partially Npr1-Dependent Transcription Factor Length = 76

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 272 TRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPR 306
           +R+   +  + DI  D Y WRKYGQK +KGSP+PR
Sbjct: 1   SRIVVHTQTLFDIVNDGYRWRKYGQKSVKGSPYPR 35

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	311
2ayd_A	76	WRKY transcription factor 1; beta strands, zinc fi	5e-12
1wj2_A	78	Probable WRKY transcription factor 4; DNA-binding	2e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04

>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana} Length = 76

 Score = 59.8 bits (145), Expect = 5e-12
 Identities = 18/35 (51%), Positives = 24/35 (68%)

Query: 272 TRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPR 306
           +R+   +  + DI  D Y WRKYGQK +KGSP+PR
Sbjct: 1   SRIVVHTQTLFDIVNDGYRWRKYGQKSVKGSPYPR 35

>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A* Length = 78

 Score = 55.5 bits (134), Expect = 2e-10
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 270 RVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPR 306
                   ++   D+  D Y WRKYGQK +KG+P+PR
Sbjct: 2   SSGSSGVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPR 38

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 7e-04
 Identities = 43/345 (12%), Positives = 83/345 (24%), Gaps = 119/345 (34%)

Query: 23  ENAVQEAASEGMQSIGEFI--KLLSRSGQVPSEQQTQYQESTSS--------SPTN---- 68
           E  VQ+   E ++   +F+   + +   Q PS     Y E            +  N    
Sbjct: 76  EEMVQKFVEEVLRINYKFLMSPIKTEQRQ-PSMMTRMYIEQRDRLYNDNQVFAKYNVSRL 134

Query: 69  ------------LEPDKEIKV-----------AAEVAVNNFK-------KV--ISLLGRP 96
                       L P K + +           A +V   ++K       K+  ++L    
Sbjct: 135 QPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV-CLSYKVQCKMDFKIFWLNL-KNC 192

Query: 97  RTGHARFR---------RAPVGSPPPPPPPPPQKEE------KVHLQEPAGPS------- 134
            +                    S          +        +  L+     +       
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252

Query: 135 VQSTNHLSKEQVSAFKVYCPTPV-HRLPPLPHQVHKSNPNSTVVTKSDHVPS---SINFS 190
           VQ+         +AF + C   +  R         K   +      + H+     S+  +
Sbjct: 253 VQNAKA-----WNAFNLSCKILLTTR--------FKQVTDFLSAATTTHISLDHHSMTLT 299

Query: 191 ASATNSFISSLTGTAGDTDSIQPSFSSGFQFTTPSSAGK-PPLSSSSLKRKCNSMDDAAL 249
                S +            +            P       P   S +         A  
Sbjct: 300 PDEVKSLLLKYLDC--RPQDL------------PREVLTTNPRRLSII---------AES 336

Query: 250 KCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKY 294
                 G       +     ++T +  I S +  + P +Y  RK 
Sbjct: 337 I---RDGLATWDNWKHVNCDKLTTI--IESSLNVLEPAEY--RKM 374

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	311
2ayd_A	76	WRKY transcription factor 1; beta strands, zinc fi	99.49
1wj2_A	78	Probable WRKY transcription factor 4; DNA-binding	99.47

>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana}

Probab=99.49  E-value=3.6e-15  Score=116.32  Aligned_cols=32  Identities=59%  Similarity=1.122  Sum_probs=29.2

Q ss_pred             CCCCCCCCCCchhhhcCCccCCCCCCCC----CCCC
Q 021515          279 SKMADIPPDDYSWRKYGQKPIKGSPHPR----CASV  310 (311)
Q Consensus       279 ~~~~~~~~Dgy~WRKYGQK~Ikgs~~PR----Cs~~  310 (311)
                      ..+.++++|||+|||||||.|||++|||    ||+.
T Consensus         8 ~~~~~~~~DGy~WRKYGQK~ikgs~~PRsYYrCt~~   43 (76)
T 2ayd_A            8 QTLFDIVNDGYRWRKYGQKSVKGSPYPRSYYRCSSP   43 (76)
T ss_dssp             ECSSSCCCCSSCEEEEEEECCTTCSSCEEEEEECST
T ss_pred             cCCCCcCCCCchhhhCcccccCCCCCceeEeEcCCC
Confidence            3578899999999999999999999999    9874

>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A*

Probab=99.47  E-value=6.9e-15  Score=115.28  Aligned_cols=37  Identities=43%  Similarity=0.879  Sum_probs=30.8

Q ss_pred             EeccCCCCCCCCCCCchhhhcCCccCCCCCCCC----CCCC
Q 021515          274 VPAISSKMADIPPDDYSWRKYGQKPIKGSPHPR----CASV  310 (311)
Q Consensus       274 vp~~s~~~~~~~~Dgy~WRKYGQK~Ikgs~~PR----Cs~~  310 (311)
                      |...+..+.++++|||.|||||||.|||++|||    ||+.
T Consensus         6 ~~~~t~s~~~~~dDGy~WRKYGQK~ikgs~~PRsYYrCt~~   46 (78)
T 1wj2_A            6 SGVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTP   46 (78)
T ss_dssp             --CCCCCCCCCCCSSSCBCCCEEECCTTCSSCEEEEEEECS
T ss_pred             EEEeccCCCCcCCCCchhhhCcccccCCCcCeeEEeecCcC
Confidence            334455678899999999999999999999999    8864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	311
d1wj2a_	71	g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cr	3e-09

>d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 71

class: Small proteins
fold: WRKY DNA-binding domain
superfamily: WRKY DNA-binding domain
family: WRKY DNA-binding domain
domain: WRKY DNA-binding protein 4
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 50.2 bits (120), Expect = 3e-09
 Identities = 15/30 (50%), Positives = 21/30 (70%)

Query: 278 SSKMADIPPDDYSWRKYGQKPIKGSPHPRC 307
           ++   D+  D Y WRKYGQK +KG+P+PR 
Sbjct: 3   TTSEVDLLDDGYRWRKYGQKVVKGNPYPRS 32

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	311
d1wj2a_	71	WRKY DNA-binding protein 4 {Thale cress (Arabidops	99.44

>d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: WRKY DNA-binding domain
superfamily: WRKY DNA-binding domain
family: WRKY DNA-binding domain
domain: WRKY DNA-binding protein 4
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.44  E-value=6.9e-15  Score=111.68  Aligned_cols=33  Identities=48%  Similarity=1.018  Sum_probs=29.2

Q ss_pred             CCCCCCCCCCchhhhcCCccCCCCCCCC----CCCCC
Q 021515          279 SKMADIPPDDYSWRKYGQKPIKGSPHPR----CASVN  311 (311)
Q Consensus       279 ~~~~~~~~Dgy~WRKYGQK~Ikgs~~PR----Cs~~~  311 (311)
                      ..+.++++|||.|||||||.|+|++|||    |++.+
T Consensus         4 ~~~~~~~dDGy~WRKYGQK~ikgs~~pRsYYrCt~~~   40 (71)
T d1wj2a_           4 TSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPG   40 (71)
T ss_dssp             CCCCCCCCSSSCBCCCEEECCTTCSSCEEEEEEECSS
T ss_pred             ccccccCCCCcEecccCceeccCCCCceEEEEccccC
Confidence            3567899999999999999999999999    88643